Query 012185
Match_columns 469
No_of_seqs 156 out of 1055
Neff 7.8
Searched_HMMs 46136
Date Thu Mar 28 23:57:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012185.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012185hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR01301 GPH_sucrose GPH fami 100.0 1.7E-64 3.6E-69 528.9 30.8 399 2-459 75-477 (477)
2 KOG0637 Sucrose transporter an 100.0 4.4E-61 9.6E-66 482.7 17.5 388 2-452 103-496 (498)
3 KOG0569 Permease of the major 99.9 4.4E-24 9.6E-29 222.4 20.7 344 48-462 118-463 (485)
4 PF13347 MFS_2: MFS/sugar tran 99.9 3.3E-20 7.1E-25 193.7 22.6 308 2-428 73-386 (428)
5 KOG0254 Predicted transporter 99.8 4.8E-20 1E-24 197.1 16.5 346 48-462 144-492 (513)
6 TIGR00792 gph sugar (Glycoside 99.8 2.7E-17 5.8E-22 171.3 23.8 344 9-459 39-426 (437)
7 TIGR00887 2A0109 phosphate:H+ 99.8 1.2E-17 2.5E-22 178.1 21.2 359 48-462 117-497 (502)
8 TIGR01299 synapt_SV2 synaptic 99.7 1.4E-17 3.1E-22 183.5 15.9 372 52-461 261-741 (742)
9 PF00083 Sugar_tr: Sugar (and 99.7 2.2E-21 4.8E-26 203.1 -15.2 343 49-465 105-448 (451)
10 PRK10077 xylE D-xylose transpo 99.7 7.1E-17 1.5E-21 170.2 18.7 332 52-462 126-466 (479)
11 TIGR00898 2A0119 cation transp 99.7 7.5E-17 1.6E-21 171.5 15.3 319 51-462 185-503 (505)
12 TIGR00879 SP MFS transporter, 99.7 9.5E-17 2.1E-21 167.1 15.0 346 49-462 130-479 (481)
13 PRK10429 melibiose:sodium symp 99.7 2E-15 4.2E-20 160.0 24.3 318 10-428 47-395 (473)
14 PRK11551 putative 3-hydroxyphe 99.7 1.3E-15 2.8E-20 157.1 22.3 293 52-458 109-401 (406)
15 TIGR00893 2A0114 d-galactonate 99.7 3.7E-15 8E-20 150.8 22.3 308 53-451 89-397 (399)
16 PRK10642 proline/glycine betai 99.7 8E-15 1.7E-19 155.9 22.5 311 55-462 127-438 (490)
17 COG2211 MelB Na+/melibiose sym 99.6 3E-14 6.5E-19 147.8 23.8 317 8-428 51-398 (467)
18 PRK09952 shikimate transporter 99.6 1.1E-14 2.4E-19 152.6 20.9 303 54-457 133-436 (438)
19 PRK10489 enterobactin exporter 99.6 2.4E-14 5.2E-19 148.7 22.0 286 59-462 123-408 (417)
20 TIGR00899 2A0120 sugar efflux 99.6 3.6E-14 7.8E-19 144.1 21.5 272 61-455 102-375 (375)
21 TIGR00900 2A0121 H+ Antiporter 99.6 1.8E-14 3.8E-19 145.0 19.0 265 52-427 98-364 (365)
22 PRK09669 putative symporter Ya 99.6 4.7E-14 1E-18 148.0 22.3 312 8-428 48-390 (444)
23 PRK11663 regulatory protein Uh 99.6 1.3E-13 2.8E-18 144.3 22.7 304 58-459 123-430 (434)
24 PF11700 ATG22: Vacuole efflux 99.6 2.1E-13 4.5E-18 144.2 22.4 346 11-459 76-473 (477)
25 PRK09874 drug efflux system pr 99.6 3.1E-13 6.8E-18 139.1 22.5 277 62-453 122-398 (408)
26 PRK11462 putative transporter; 99.6 4E-13 8.6E-18 142.0 23.6 308 8-428 48-389 (460)
27 PRK10406 alpha-ketoglutarate t 99.6 5.8E-13 1.3E-17 139.3 24.3 297 55-462 133-431 (432)
28 TIGR00883 2A0106 metabolite-pr 99.6 1.2E-13 2.5E-18 140.4 18.5 274 52-428 102-377 (394)
29 TIGR00712 glpT glycerol-3-phos 99.6 3.3E-13 7.1E-18 141.4 22.2 305 58-457 130-437 (438)
30 PRK03545 putative arabinose tr 99.6 4.5E-13 9.7E-18 137.9 22.5 267 63-453 114-380 (390)
31 TIGR00710 efflux_Bcr_CflA drug 99.5 7.1E-13 1.5E-17 135.0 22.9 258 52-421 99-356 (385)
32 cd06174 MFS The Major Facilita 99.5 4.7E-13 1E-17 133.4 20.4 257 50-449 91-348 (352)
33 PRK11646 multidrug resistance 99.5 1.1E-12 2.5E-17 135.8 21.8 284 52-456 105-391 (400)
34 TIGR00881 2A0104 phosphoglycer 99.5 3E-13 6.5E-18 136.6 17.1 286 51-428 88-374 (379)
35 TIGR00901 2A0125 AmpG-related 99.5 4.4E-13 9.6E-18 135.9 18.3 260 58-409 95-354 (356)
36 PRK09705 cynX putative cyanate 99.5 8.4E-13 1.8E-17 136.4 20.1 287 51-460 102-388 (393)
37 PRK11010 ampG muropeptide tran 99.5 1.2E-12 2.7E-17 139.3 22.0 281 56-451 117-401 (491)
38 TIGR00890 2A0111 Oxalate/Forma 99.5 1.2E-12 2.6E-17 132.1 20.8 273 58-446 103-375 (377)
39 PRK08633 2-acyl-glycerophospho 99.5 1.3E-12 2.7E-17 152.4 22.7 299 57-455 114-412 (1146)
40 PRK11102 bicyclomycin/multidru 99.5 6.2E-12 1.3E-16 128.2 24.7 289 52-455 85-374 (377)
41 TIGR00895 2A0115 benzoate tran 99.5 4.9E-13 1.1E-17 136.2 15.9 287 50-423 109-397 (398)
42 PRK05122 major facilitator sup 99.5 4.1E-12 8.9E-17 130.9 22.9 140 295-459 255-394 (399)
43 PRK11273 glpT sn-glycerol-3-ph 99.5 3.7E-12 8.1E-17 134.0 22.8 302 60-459 134-442 (452)
44 TIGR00891 2A0112 putative sial 99.5 7.8E-13 1.7E-17 135.3 17.2 286 54-429 108-393 (405)
45 PRK15011 sugar efflux transpor 99.5 5.9E-12 1.3E-16 130.0 23.2 266 67-456 126-393 (393)
46 TIGR02332 HpaX 4-hydroxyphenyl 99.5 4.6E-12 9.9E-17 131.8 22.2 305 55-442 105-410 (412)
47 PRK10473 multidrug efflux syst 99.5 6.8E-12 1.5E-16 129.1 23.2 253 55-429 100-352 (392)
48 PRK15075 citrate-proton sympor 99.5 4.3E-12 9.3E-17 132.8 20.7 267 58-429 129-397 (434)
49 PRK09848 glucuronide transport 99.5 6E-12 1.3E-16 132.2 21.7 158 238-428 228-390 (448)
50 PRK12382 putative transporter; 99.5 5.9E-12 1.3E-16 129.5 21.1 135 295-453 255-389 (392)
51 PRK11902 ampG muropeptide tran 99.4 1E-11 2.2E-16 128.5 22.1 279 60-455 108-391 (402)
52 PRK09556 uhpT sugar phosphate 99.4 4.6E-12 9.9E-17 133.9 18.6 299 59-452 135-448 (467)
53 PRK11195 lysophospholipid tran 99.4 2.7E-11 5.7E-16 125.3 24.0 292 56-463 98-391 (393)
54 TIGR00897 2A0118 polyol permea 99.4 2.5E-11 5.5E-16 125.6 23.8 177 238-451 222-399 (402)
55 COG2814 AraJ Arabinose efflux 99.4 2.8E-11 6E-16 123.5 23.1 285 48-454 103-387 (394)
56 PRK06814 acylglycerophosphoeth 99.4 6.6E-12 1.4E-16 146.6 20.8 302 56-451 118-420 (1140)
57 PF07690 MFS_1: Major Facilita 99.4 3.1E-12 6.8E-17 128.1 15.7 265 49-417 88-352 (352)
58 TIGR00894 2A0114euk Na(+)-depe 99.4 1.4E-11 2.9E-16 130.0 21.3 304 53-451 138-448 (465)
59 PRK12307 putative sialic acid 99.4 9.8E-12 2.1E-16 129.1 19.7 295 54-457 114-413 (426)
60 PRK10054 putative transporter; 99.4 5.8E-12 1.3E-16 130.3 17.9 272 65-455 115-386 (395)
61 PF05977 MFS_3: Transmembrane 99.4 2.7E-11 5.9E-16 129.5 22.3 285 61-461 117-403 (524)
62 PRK10091 MFS transport protein 99.4 2.9E-11 6.2E-16 124.3 21.7 270 55-447 100-370 (382)
63 PRK10213 nepI ribonucleoside t 99.4 5.5E-11 1.2E-15 123.0 23.8 275 55-453 117-391 (394)
64 TIGR00903 2A0129 major facilit 99.4 3.1E-11 6.7E-16 124.0 21.5 266 66-456 98-367 (368)
65 PRK10504 putative transporter; 99.4 3.2E-11 6.9E-16 127.2 21.1 299 54-428 106-417 (471)
66 TIGR00711 efflux_EmrB drug res 99.3 1.5E-11 3.3E-16 129.6 16.2 301 51-425 95-409 (485)
67 TIGR00886 2A0108 nitrite extru 99.3 4.6E-11 1E-15 121.0 18.7 264 53-409 98-362 (366)
68 PRK15402 multidrug efflux syst 99.3 3.1E-10 6.6E-15 117.4 25.0 256 62-428 117-372 (406)
69 TIGR00892 2A0113 monocarboxyla 99.3 6.2E-11 1.3E-15 125.0 20.1 292 57-448 119-416 (455)
70 PRK03893 putative sialic acid 99.3 7.5E-11 1.6E-15 125.0 20.8 138 293-455 315-456 (496)
71 PF03209 PUCC: PUCC protein; 99.3 1.9E-10 4.2E-15 116.8 22.4 334 2-449 51-394 (403)
72 PRK03699 putative transporter; 99.3 7.6E-11 1.6E-15 121.7 19.8 270 56-447 105-374 (394)
73 PRK14995 methyl viologen resis 99.3 4.7E-11 1E-15 127.3 18.6 290 55-423 103-410 (495)
74 TIGR00902 2A0127 phenyl propri 99.3 9.3E-11 2E-15 120.6 20.1 270 56-448 104-374 (382)
75 TIGR00882 2A0105 oligosacchari 99.3 1E-10 2.3E-15 120.6 19.3 131 297-451 262-393 (396)
76 TIGR00889 2A0110 nucleoside tr 99.3 1.3E-10 2.7E-15 121.4 19.9 195 240-460 210-409 (418)
77 PRK09528 lacY galactoside perm 99.3 3.8E-11 8.3E-16 124.9 16.0 143 294-460 267-410 (420)
78 PRK11128 putative 3-phenylprop 99.3 1.4E-10 3E-15 119.3 19.9 272 57-451 105-377 (382)
79 PLN00028 nitrate transmembrane 99.3 3.3E-10 7.2E-15 120.2 20.5 283 65-451 142-431 (476)
80 PRK11043 putative transporter; 99.3 1.4E-09 3.1E-14 112.1 24.0 251 58-425 106-356 (401)
81 PRK03633 putative MFS family t 99.2 1E-09 2.2E-14 112.7 22.1 129 295-450 241-369 (381)
82 TIGR02718 sider_RhtX_FptX side 99.2 8.8E-10 1.9E-14 113.4 19.7 178 239-449 209-387 (390)
83 PRK10133 L-fucose transporter; 99.2 2.4E-09 5.3E-14 112.4 21.3 298 49-449 120-429 (438)
84 KOG2532 Permease of the major 99.2 9.4E-10 2E-14 116.0 17.9 325 5-448 107-442 (466)
85 KOG0255 Synaptic vesicle trans 99.2 6.7E-10 1.5E-14 119.0 16.6 323 54-462 179-501 (521)
86 PRK15403 multidrug efflux syst 99.2 8.2E-09 1.8E-13 107.5 24.0 75 63-152 121-195 (413)
87 TIGR00896 CynX cyanate transpo 99.2 2E-09 4.3E-14 109.2 18.7 246 64-429 105-351 (355)
88 PRK11652 emrD multidrug resist 99.1 5.1E-09 1.1E-13 107.7 21.5 247 62-424 112-358 (394)
89 KOG0253 Synaptic vesicle trans 99.1 6.7E-10 1.5E-14 110.5 13.3 324 67-461 186-527 (528)
90 TIGR01272 gluP glucose/galacto 99.1 4.9E-09 1.1E-13 105.1 19.6 276 47-429 11-293 (310)
91 COG2270 Permeases of the major 99.1 2E-09 4.3E-14 109.5 14.8 306 48-456 117-431 (438)
92 PRK15034 nitrate/nitrite trans 99.0 1.9E-08 4.2E-13 105.7 20.9 289 61-452 142-453 (462)
93 COG2271 UhpC Sugar phosphate p 99.0 2.3E-08 4.9E-13 101.8 19.0 291 63-451 134-432 (448)
94 PRK10054 putative transporter; 99.0 5.3E-09 1.1E-13 108.3 14.9 183 235-457 4-186 (395)
95 KOG2615 Permease of the major 99.0 1.2E-08 2.5E-13 102.3 15.9 294 61-444 135-432 (451)
96 TIGR00788 fbt folate/biopterin 99.0 3.7E-09 7.9E-14 112.1 12.2 314 51-455 125-447 (468)
97 PRK11646 multidrug resistance 98.9 1.5E-08 3.3E-13 105.0 13.9 181 234-456 8-188 (400)
98 KOG2504 Monocarboxylate transp 98.9 4.1E-08 8.8E-13 104.8 17.3 177 238-454 298-476 (509)
99 TIGR00885 fucP L-fucose:H+ sym 98.9 1.5E-07 3.4E-12 98.0 21.0 273 50-426 98-381 (410)
100 PRK10207 dipeptide/tripeptide 98.9 3E-08 6.6E-13 105.7 15.9 173 235-443 11-184 (489)
101 PRK10091 MFS transport protein 98.9 4.7E-08 1E-12 100.4 15.2 182 236-457 1-182 (382)
102 PRK15403 multidrug efflux syst 98.9 1.7E-08 3.7E-13 105.1 12.0 142 293-458 55-196 (413)
103 PF07690 MFS_1: Major Facilita 98.8 6.4E-08 1.4E-12 96.9 15.5 176 243-457 1-176 (352)
104 TIGR00924 yjdL_sub1_fam amino 98.8 7.1E-08 1.5E-12 102.5 16.1 177 235-447 7-186 (475)
105 TIGR00891 2A0112 putative sial 98.8 8.2E-08 1.8E-12 98.1 15.6 178 241-457 15-192 (405)
106 TIGR00880 2_A_01_02 Multidrug 98.8 3.3E-08 7.1E-13 84.8 10.7 136 297-456 6-141 (141)
107 TIGR00900 2A0121 H+ Antiporter 98.8 4E-08 8.7E-13 98.7 12.6 181 241-456 2-183 (365)
108 TIGR00710 efflux_Bcr_CflA drug 98.8 8E-08 1.7E-12 97.7 14.8 144 293-460 44-187 (385)
109 PRK09584 tppB putative tripept 98.8 1.5E-07 3.2E-12 100.7 15.9 185 235-455 18-206 (500)
110 PRK10504 putative transporter; 98.8 8.3E-08 1.8E-12 101.2 13.9 183 239-461 11-193 (471)
111 PRK11195 lysophospholipid tran 98.8 8.7E-08 1.9E-12 99.1 13.6 178 236-458 1-178 (393)
112 TIGR00895 2A0115 benzoate tran 98.8 1.4E-07 3E-12 96.0 14.8 140 294-457 57-196 (398)
113 TIGR00711 efflux_EmrB drug res 98.7 1.2E-07 2.6E-12 100.0 14.0 177 242-458 6-182 (485)
114 TIGR00924 yjdL_sub1_fam amino 98.7 7.4E-07 1.6E-11 94.7 19.9 142 295-451 318-466 (475)
115 PRK10473 multidrug efflux syst 98.7 2.2E-07 4.8E-12 95.5 15.3 180 240-459 5-184 (392)
116 TIGR02332 HpaX 4-hydroxyphenyl 98.7 2E-07 4.2E-12 97.1 14.6 144 293-458 47-194 (412)
117 PF01306 LacY_symp: LacY proto 98.7 4.1E-07 8.9E-12 94.0 16.6 292 56-460 114-407 (412)
118 PRK03545 putative arabinose tr 98.7 2.6E-07 5.6E-12 95.1 15.1 142 293-458 48-189 (390)
119 PRK11663 regulatory protein Uh 98.7 2.6E-07 5.6E-12 96.8 15.0 140 293-456 62-201 (434)
120 PRK10213 nepI ribonucleoside t 98.7 2.7E-07 5.9E-12 95.5 14.9 142 293-458 59-200 (394)
121 KOG0252 Inorganic phosphate tr 98.7 7.7E-08 1.7E-12 98.6 9.7 347 54-462 152-506 (538)
122 PRK15402 multidrug efflux syst 98.7 3.3E-07 7.1E-12 94.8 14.6 143 293-459 52-194 (406)
123 TIGR00893 2A0114 d-galactonate 98.7 1.6E-07 3.4E-12 94.9 11.4 142 293-458 33-174 (399)
124 COG2223 NarK Nitrate/nitrite t 98.6 2.1E-07 4.5E-12 94.8 11.6 281 61-452 119-400 (417)
125 PRK11551 putative 3-hydroxyphe 98.6 5.1E-07 1.1E-11 93.1 14.9 141 293-457 54-194 (406)
126 PRK09874 drug efflux system pr 98.6 8.2E-07 1.8E-11 91.3 16.1 182 239-456 15-196 (408)
127 PRK15462 dipeptide/tripeptide 98.6 7.7E-07 1.7E-11 94.6 16.1 177 236-448 7-184 (493)
128 TIGR00881 2A0104 phosphoglycer 98.6 1.9E-07 4.1E-12 94.2 11.0 141 293-457 34-175 (379)
129 cd06174 MFS The Major Facilita 98.6 6.4E-07 1.4E-11 89.1 14.1 168 242-449 3-170 (352)
130 PRK10489 enterobactin exporter 98.6 2.2E-07 4.7E-12 96.6 10.6 184 238-457 17-200 (417)
131 TIGR01299 synapt_SV2 synaptic 98.6 6.7E-07 1.4E-11 99.4 14.9 141 293-456 206-357 (742)
132 PRK14995 methyl viologen resis 98.6 8.6E-07 1.9E-11 94.6 15.1 145 292-459 44-188 (495)
133 PRK05122 major facilitator sup 98.6 1.4E-06 3.1E-11 89.6 15.9 179 238-447 15-193 (399)
134 PRK10207 dipeptide/tripeptide 98.6 5.7E-06 1.2E-10 88.3 20.9 113 297-421 317-436 (489)
135 TIGR00903 2A0129 major facilit 98.6 6.3E-07 1.4E-11 92.1 12.9 167 250-457 3-169 (368)
136 TIGR00897 2A0118 polyol permea 98.6 1.8E-06 3.9E-11 89.4 16.2 160 235-428 10-170 (402)
137 PRK11652 emrD multidrug resist 98.5 1.3E-06 2.8E-11 89.9 14.8 142 293-458 47-188 (394)
138 TIGR00886 2A0108 nitrite extru 98.5 1.4E-06 3E-11 88.2 14.8 148 240-424 3-150 (366)
139 TIGR00899 2A0120 sugar efflux 98.5 1.4E-06 3E-11 88.4 14.7 176 245-457 4-180 (375)
140 PF03825 Nuc_H_symport: Nucleo 98.5 1.1E-05 2.3E-10 83.9 21.4 187 238-457 207-399 (400)
141 PRK12307 putative sialic acid 98.5 2E-06 4.3E-11 89.3 15.7 140 293-457 57-196 (426)
142 TIGR00805 oat sodium-independe 98.5 7E-06 1.5E-10 90.3 19.4 231 46-333 172-413 (633)
143 PRK10077 xylE D-xylose transpo 98.5 1.3E-06 2.7E-11 92.3 13.0 154 293-457 59-218 (479)
144 PRK03893 putative sialic acid 98.5 2.6E-06 5.6E-11 90.4 14.8 176 241-457 23-198 (496)
145 PRK11043 putative transporter; 98.5 2.9E-06 6.3E-11 87.5 14.8 139 293-455 45-183 (401)
146 PRK03633 putative MFS family t 98.5 3.4E-06 7.5E-11 86.5 15.2 152 237-426 5-156 (381)
147 PRK10642 proline/glycine betai 98.4 5.1E-06 1.1E-10 88.5 16.6 144 298-456 66-215 (490)
148 PRK11102 bicyclomycin/multidru 98.4 1.2E-06 2.6E-11 89.2 11.3 142 293-458 30-171 (377)
149 TIGR00882 2A0105 oligosacchari 98.4 4.5E-06 9.7E-11 86.0 15.6 185 238-456 2-186 (396)
150 PRK08633 2-acyl-glycerophospho 98.4 3.3E-06 7.1E-11 98.9 16.3 115 293-426 51-165 (1146)
151 PRK12382 putative transporter; 98.4 4.9E-06 1.1E-10 85.5 15.7 186 239-456 16-201 (392)
152 TIGR00712 glpT glycerol-3-phos 98.4 1.8E-06 4E-11 90.4 12.6 146 293-457 65-210 (438)
153 TIGR00879 SP MFS transporter, 98.4 2.1E-06 4.5E-11 89.3 12.7 143 293-457 75-220 (481)
154 PRK10406 alpha-ketoglutarate t 98.4 8.8E-06 1.9E-10 85.1 17.1 143 300-457 74-222 (432)
155 TIGR00890 2A0111 Oxalate/Forma 98.4 1.9E-06 4.1E-11 86.8 11.7 139 293-456 42-180 (377)
156 PRK09952 shikimate transporter 98.4 5.8E-06 1.3E-10 86.8 15.6 190 244-457 28-223 (438)
157 TIGR00898 2A0119 cation transp 98.4 1.6E-06 3.5E-11 92.3 11.5 136 293-456 131-266 (505)
158 PRK15011 sugar efflux transpor 98.4 6E-06 1.3E-10 85.2 15.2 184 238-458 15-199 (393)
159 PRK09556 uhpT sugar phosphate 98.4 2.5E-06 5.5E-11 90.2 12.4 146 293-455 68-214 (467)
160 KOG1330 Sugar transporter/spin 98.4 2.1E-06 4.5E-11 88.5 11.2 84 56-153 131-214 (493)
161 TIGR00887 2A0109 phosphate:H+ 98.4 1.8E-06 3.9E-11 92.3 11.0 147 293-456 60-227 (502)
162 PRK09528 lacY galactoside perm 98.4 6E-06 1.3E-10 85.9 14.6 185 238-456 10-194 (420)
163 PRK09584 tppB putative tripept 98.4 2.3E-05 4.9E-10 83.9 19.2 99 309-420 340-438 (500)
164 PF05977 MFS_3: Transmembrane 98.3 4.3E-06 9.4E-11 89.7 13.0 177 238-449 10-186 (524)
165 PRK03699 putative transporter; 98.3 1.3E-05 2.7E-10 82.8 16.0 134 294-450 47-180 (394)
166 PLN00028 nitrate transmembrane 98.3 1.1E-05 2.3E-10 85.9 15.6 136 295-453 77-219 (476)
167 PRK06814 acylglycerophosphoeth 98.3 8.8E-06 1.9E-10 95.5 16.4 145 291-457 54-198 (1140)
168 TIGR00883 2A0106 metabolite-pr 98.3 8.9E-06 1.9E-10 82.4 14.4 141 302-457 48-194 (394)
169 PRK11273 glpT sn-glycerol-3-ph 98.3 8E-06 1.7E-10 86.0 14.1 146 293-457 67-212 (452)
170 TIGR01301 GPH_sucrose GPH fami 98.3 6.6E-06 1.4E-10 87.1 13.4 199 240-457 6-222 (477)
171 PRK15075 citrate-proton sympor 98.3 2.5E-05 5.4E-10 81.7 16.5 189 241-457 18-215 (434)
172 TIGR00892 2A0113 monocarboxyla 98.3 8.3E-06 1.8E-10 86.1 12.7 134 295-453 60-194 (455)
173 KOG1330 Sugar transporter/spin 98.2 1.1E-06 2.4E-11 90.5 5.2 139 296-457 75-213 (493)
174 PRK09705 cynX putative cyanate 98.2 1.1E-05 2.4E-10 83.4 12.6 130 293-446 48-177 (393)
175 PF03092 BT1: BT1 family; Int 98.2 2.2E-05 4.8E-10 82.5 13.4 116 2-150 60-177 (433)
176 COG2814 AraJ Arabinose efflux 98.2 2E-05 4.3E-10 80.9 12.3 138 293-454 52-189 (394)
177 KOG3764 Vesicular amine transp 98.2 8.7E-06 1.9E-10 82.5 9.4 143 289-455 107-249 (464)
178 TIGR00901 2A0125 AmpG-related 98.1 2.7E-05 5.9E-10 78.8 11.5 133 306-457 38-182 (356)
179 TIGR00894 2A0114euk Na(+)-depe 98.1 1.8E-05 3.9E-10 83.4 10.4 141 293-455 80-221 (465)
180 PF06609 TRI12: Fungal trichot 98.1 7.1E-05 1.5E-09 81.0 14.8 108 3-148 110-217 (599)
181 PRK15034 nitrate/nitrite trans 98.0 0.00011 2.4E-09 77.5 15.5 146 294-457 75-236 (462)
182 PRK11010 ampG muropeptide tran 98.0 6.8E-05 1.5E-09 80.1 14.2 132 304-457 60-198 (491)
183 TIGR00896 CynX cyanate transpo 98.0 4.8E-05 1E-09 77.0 12.3 129 293-445 39-167 (355)
184 KOG0255 Synaptic vesicle trans 98.0 3.6E-05 7.8E-10 82.6 10.4 137 293-457 122-258 (521)
185 KOG2533 Permease of the major 98.0 0.00032 7E-09 74.7 17.3 202 61-331 149-355 (495)
186 COG2271 UhpC Sugar phosphate p 97.9 8.5E-05 1.8E-09 76.1 12.1 136 297-456 72-209 (448)
187 KOG2615 Permease of the major 97.9 4.7E-05 1E-09 76.8 9.9 169 253-457 43-217 (451)
188 TIGR00885 fucP L-fucose:H+ sym 97.9 0.00029 6.2E-09 73.5 15.7 113 293-424 42-154 (410)
189 COG0738 FucP Fucose permease [ 97.9 0.0018 3.9E-08 66.2 19.8 57 49-105 107-163 (422)
190 KOG2816 Predicted transporter 97.9 0.00088 1.9E-08 70.8 18.3 257 61-425 127-391 (463)
191 KOG3764 Vesicular amine transp 97.8 0.00055 1.2E-08 69.7 14.9 266 59-447 172-448 (464)
192 TIGR00806 rfc RFC reduced fola 97.8 0.00053 1.1E-08 72.1 14.9 271 66-420 134-409 (511)
193 PRK10133 L-fucose transporter; 97.8 0.00063 1.4E-08 71.5 15.7 111 293-422 65-175 (438)
194 PRK11902 ampG muropeptide tran 97.8 0.0002 4.3E-09 74.1 11.6 135 303-458 46-186 (402)
195 KOG2325 Predicted transporter/ 97.7 0.00033 7.1E-09 73.8 12.8 102 49-157 133-238 (488)
196 TIGR00792 gph sugar (Glycoside 97.7 0.00015 3.3E-09 75.4 10.3 149 293-457 39-198 (437)
197 KOG0254 Predicted transporter 97.7 0.00048 1E-08 73.9 13.7 140 293-456 93-232 (513)
198 KOG4686 Predicted sugar transp 97.7 0.00075 1.6E-08 65.8 13.1 183 237-457 263-447 (459)
199 PTZ00207 hypothetical protein; 97.6 0.00062 1.4E-08 74.0 13.5 134 304-457 76-209 (591)
200 TIGR00889 2A0110 nucleoside tr 97.6 0.00072 1.6E-08 70.6 13.2 172 240-456 4-182 (418)
201 COG3104 PTR2 Dipeptide/tripept 97.6 0.00044 9.5E-09 72.4 10.6 180 236-450 19-203 (498)
202 TIGR00806 rfc RFC reduced fola 97.5 0.0013 2.8E-08 69.3 13.5 132 298-454 71-203 (511)
203 COG2807 CynX Cyanate permease 97.5 0.014 3.1E-07 59.0 20.1 264 46-430 99-363 (395)
204 PRK11128 putative 3-phenylprop 97.5 0.0022 4.7E-08 65.8 14.9 175 237-456 3-181 (382)
205 PF06609 TRI12: Fungal trichot 97.5 0.0011 2.4E-08 71.9 12.4 131 293-450 82-214 (599)
206 TIGR00805 oat sodium-independe 97.5 0.00025 5.5E-09 78.1 7.5 156 297-456 76-283 (633)
207 PTZ00207 hypothetical protein; 97.4 0.0066 1.4E-07 66.1 17.9 34 63-97 137-170 (591)
208 KOG3626 Organic anion transpor 97.4 0.0024 5.2E-08 70.2 14.2 111 40-152 231-347 (735)
209 PF01770 Folate_carrier: Reduc 97.4 0.017 3.7E-07 59.9 19.4 112 2-153 72-186 (412)
210 PF13347 MFS_2: MFS/sugar tran 97.3 0.00055 1.2E-08 71.5 8.0 148 294-455 42-200 (428)
211 KOG2563 Permease of the major 97.3 0.0036 7.8E-08 64.8 13.4 76 75-157 169-244 (480)
212 KOG0569 Permease of the major 97.3 0.0038 8.2E-08 66.1 13.7 140 297-458 68-209 (485)
213 TIGR00902 2A0127 phenyl propri 97.3 0.0058 1.3E-07 62.7 15.0 158 240-441 6-167 (382)
214 PRK15462 dipeptide/tripeptide 97.2 0.023 5E-07 60.7 19.1 118 293-423 312-437 (493)
215 TIGR00880 2_A_01_02 Multidrug 97.2 0.001 2.2E-08 56.5 6.8 85 51-150 56-140 (141)
216 PF00083 Sugar_tr: Sugar (and 97.2 1.4E-05 3E-10 83.7 -6.2 140 297-456 54-194 (451)
217 COG2223 NarK Nitrate/nitrite t 97.0 0.0076 1.7E-07 61.9 12.5 166 244-452 23-192 (417)
218 PRK09669 putative symporter Ya 96.9 0.0048 1.1E-07 64.7 10.3 148 293-456 49-207 (444)
219 KOG2532 Permease of the major 96.9 0.0076 1.7E-07 63.9 11.7 137 298-456 82-219 (466)
220 TIGR02718 sider_RhtX_FptX side 96.9 0.012 2.6E-07 60.3 12.8 147 290-456 38-187 (390)
221 PRK10429 melibiose:sodium symp 96.8 0.0065 1.4E-07 64.4 10.3 148 293-456 46-204 (473)
222 PRK11462 putative transporter; 96.8 0.011 2.4E-07 62.6 11.9 119 294-428 50-174 (460)
223 KOG2816 Predicted transporter 96.8 0.02 4.3E-07 60.7 13.4 138 299-463 72-209 (463)
224 PF03137 OATP: Organic Anion T 96.8 0.00033 7.2E-09 75.6 -0.0 63 42-104 137-199 (539)
225 PF03825 Nuc_H_symport: Nucleo 96.7 0.032 6.8E-07 58.1 13.7 81 241-337 5-86 (400)
226 PF05631 DUF791: Protein of un 96.6 0.033 7.2E-07 56.4 13.2 139 300-460 80-223 (354)
227 COG2807 CynX Cyanate permease 96.6 0.022 4.9E-07 57.6 11.9 137 301-465 59-196 (395)
228 PF05978 UNC-93: Ion channel r 96.5 0.033 7.2E-07 50.1 11.3 96 290-408 38-133 (156)
229 PRK09848 glucuronide transport 96.4 0.045 9.7E-07 57.4 12.8 39 293-331 48-91 (448)
230 KOG2533 Permease of the major 96.3 0.019 4.1E-07 61.3 9.6 143 294-458 86-232 (495)
231 PF01306 LacY_symp: LacY proto 96.3 0.03 6.4E-07 58.3 10.6 177 238-453 7-188 (412)
232 COG2211 MelB Na+/melibiose sym 96.2 0.034 7.4E-07 58.6 10.9 144 301-460 60-211 (467)
233 KOG0252 Inorganic phosphate tr 95.9 0.074 1.6E-06 55.6 11.1 88 302-404 97-184 (538)
234 KOG2504 Monocarboxylate transp 95.9 0.039 8.4E-07 59.3 9.6 138 293-454 85-222 (509)
235 PF13000 Acatn: Acetyl-coenzym 95.8 0.96 2.1E-05 48.0 18.9 32 68-103 140-171 (544)
236 TIGR00788 fbt folate/biopterin 95.2 0.14 3.1E-06 54.3 11.1 88 367-457 125-212 (468)
237 PF02487 CLN3: CLN3 protein; 94.6 1.2 2.6E-05 46.3 15.2 59 361-421 334-392 (402)
238 PF11700 ATG22: Vacuole efflux 94.5 0.53 1.2E-05 50.2 13.1 155 293-465 74-259 (477)
239 COG0738 FucP Fucose permease [ 94.1 0.75 1.6E-05 47.5 12.4 144 301-463 60-221 (422)
240 PF03209 PUCC: PUCC protein; 93.9 0.37 8E-06 49.8 9.8 115 307-427 32-152 (403)
241 COG3104 PTR2 Dipeptide/tripept 93.7 1.8 3.9E-05 45.9 14.6 108 4-146 95-204 (498)
242 TIGR00926 2A1704 Peptide:H+ sy 92.3 7 0.00015 43.5 17.5 94 44-146 83-180 (654)
243 PF03092 BT1: BT1 family; Int 92.0 0.62 1.3E-05 49.0 8.6 82 372-455 96-177 (433)
244 PF00854 PTR2: POT family; In 91.7 0.59 1.3E-05 47.8 7.9 114 4-145 4-120 (372)
245 KOG2563 Permease of the major 91.5 2.1 4.6E-05 44.9 11.4 129 246-406 56-184 (480)
246 KOG3810 Micronutrient transpor 91.3 5.5 0.00012 40.6 13.7 148 281-461 269-427 (433)
247 TIGR00939 2a57 Equilibrative N 90.8 2.4 5.2E-05 44.7 11.4 113 293-417 49-161 (437)
248 KOG3574 Acetyl-CoA transporter 90.5 6.1 0.00013 40.8 13.4 78 13-103 109-186 (510)
249 COG0477 ProP Permeases of the 90.4 0.89 1.9E-05 42.8 7.3 112 293-423 43-155 (338)
250 KOG0253 Synaptic vesicle trans 90.3 2 4.3E-05 44.2 9.7 127 303-456 127-253 (528)
251 PF12832 MFS_1_like: MFS_1 lik 88.8 2.6 5.7E-05 33.0 7.5 69 242-326 4-72 (77)
252 PF06813 Nodulin-like: Nodulin 88.6 6.5 0.00014 38.2 11.7 104 305-424 52-155 (250)
253 TIGR00769 AAA ADP/ATP carrier 88.5 18 0.00039 38.6 15.9 53 49-101 131-184 (472)
254 COG2270 Permeases of the major 84.8 29 0.00064 36.3 14.5 146 296-458 65-225 (438)
255 TIGR00926 2A1704 Peptide:H+ sy 83.2 14 0.00029 41.2 12.2 137 298-448 32-177 (654)
256 KOG2325 Predicted transporter/ 83.1 12 0.00025 40.0 11.1 146 293-456 75-232 (488)
257 PF06963 FPN1: Ferroportin1 (F 81.4 76 0.0017 33.4 17.5 106 298-417 302-409 (432)
258 KOG3762 Predicted transporter 80.4 2.7 5.7E-05 45.1 5.1 115 310-448 427-542 (618)
259 KOG3098 Uncharacterized conser 78.5 97 0.0021 33.0 18.9 95 310-412 303-400 (461)
260 PF01770 Folate_carrier: Reduc 72.5 66 0.0014 33.7 12.7 105 239-378 6-110 (412)
261 KOG1479 Nucleoside transporter 70.4 1.1E+02 0.0023 32.0 13.6 93 43-153 114-208 (406)
262 KOG3098 Uncharacterized conser 69.0 48 0.001 35.2 11.0 96 295-412 56-154 (461)
263 PF03219 TLC: TLC ATP/ADP tran 65.9 1.9E+02 0.0042 31.0 16.3 89 8-98 101-196 (491)
264 KOG3762 Predicted transporter 64.3 22 0.00048 38.4 7.3 47 58-104 471-518 (618)
265 PF07672 MFS_Mycoplasma: Mycop 58.2 1.5E+02 0.0032 29.1 11.3 25 123-147 37-61 (267)
266 TIGR01272 gluP glucose/galacto 51.3 24 0.00051 35.1 4.9 94 363-458 11-119 (310)
267 PF06813 Nodulin-like: Nodulin 50.8 53 0.0011 31.9 7.0 73 65-154 115-187 (250)
268 KOG2601 Iron transporter [Inor 50.7 11 0.00025 38.7 2.4 51 47-104 394-444 (503)
269 PF00854 PTR2: POT family; In 50.2 46 0.001 33.8 7.0 85 363-449 34-119 (372)
270 PRK10692 hypothetical protein; 49.7 24 0.00051 28.2 3.5 55 317-382 2-58 (92)
271 PF06645 SPC12: Microsomal sig 48.8 31 0.00067 27.0 4.1 55 78-153 4-58 (76)
272 KOG4112 Signal peptidase subun 46.9 31 0.00067 28.0 3.8 25 79-103 20-44 (101)
273 KOG4686 Predicted sugar transp 40.8 79 0.0017 31.8 6.4 54 51-104 357-410 (459)
274 PF06963 FPN1: Ferroportin1 (F 38.8 4.9E+02 0.011 27.4 16.1 79 239-333 3-82 (432)
275 PF10762 DUF2583: Protein of u 38.0 36 0.00078 27.0 2.9 54 318-382 3-58 (89)
276 TIGR00769 AAA ADP/ATP carrier 34.9 2.4E+02 0.0052 30.1 9.5 116 303-424 58-189 (472)
277 KOG4812 Golgi-associated prote 33.9 1.2E+02 0.0027 29.1 6.2 29 239-267 163-191 (262)
278 COG5336 Uncharacterized protei 32.6 2.4E+02 0.0051 23.8 6.9 50 280-334 38-88 (116)
279 PRK03612 spermidine synthase; 30.7 2.7E+02 0.0059 30.1 9.3 33 398-430 143-176 (521)
280 TIGR00986 3a0801s05tom22 mitoc 29.0 1.4E+02 0.0031 26.3 5.4 35 69-103 56-90 (145)
281 KOG4332 Predicted sugar transp 27.0 21 0.00045 35.4 -0.1 167 251-459 54-226 (454)
282 PF06779 DUF1228: Protein of u 26.5 3.2E+02 0.0068 21.8 6.7 45 296-340 34-78 (85)
283 PF03137 OATP: Organic Anion T 25.7 24 0.00051 38.4 0.1 156 297-456 46-256 (539)
284 PF10997 DUF2837: Protein of u 24.9 6.5E+02 0.014 24.5 12.2 63 42-104 23-86 (254)
285 PF08229 SHR3_chaperone: ER me 24.8 5.2E+02 0.011 24.1 8.7 93 228-340 49-151 (196)
286 PF04281 Tom22: Mitochondrial 24.0 1.6E+02 0.0035 25.8 4.9 31 69-99 58-88 (137)
287 KOG3626 Organic anion transpor 22.0 2.5E+02 0.0053 31.8 7.0 95 364-461 239-350 (735)
288 KOG2082 K+/Cl- cotransporter K 21.9 3E+02 0.0066 31.2 7.4 20 320-339 606-625 (1075)
289 TIGR00939 2a57 Equilibrative N 21.5 1E+02 0.0022 32.4 3.9 56 48-103 374-429 (437)
No 1
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=100.00 E-value=1.7e-64 Score=528.95 Aligned_cols=399 Identities=43% Similarity=0.811 Sum_probs=343.0
Q ss_pred CeeehhHHHHHHHHHhhcchhhHhhhcCCCcccccccCCCccchhhHHHHHHHHHhccccccchhHHHHHhcCCCccch-
Q 012185 2 HIKVRKKTAIYSCRMSDDFCCYIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQR- 80 (469)
Q Consensus 2 pfi~~g~~~~~i~llll~~~~~i~~~l~d~~~~~~~~~~~~~~~i~~~v~g~~llD~a~n~~~~p~rAli~D~~p~~qr- 80 (469)
||++.|++..++++++++++++++..++|+.+ ++.+++++++++++++++|++.|++|.|.||+++|++|++||
T Consensus 75 p~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~-----~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~ 149 (477)
T TIGR01301 75 PFIAAGAALVAFAVILIGFAADIGHLFGDNLD-----KKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARR 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHhCchhhhhcccccc-----ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHH
Confidence 89999999999999999999999988887643 455678889999999999999999999999999999999876
Q ss_pred -hhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHHhhheeEEeeccCCCCCCCC
Q 012185 81 -NSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPN 159 (469)
Q Consensus 81 -~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~~~it~~~v~E~p~~~~~~~ 159 (469)
++++++++++.++|+++||++|++++|.+.+|+.++++++..|.++|.+|.++++.++++++++++++||+|+.++++.
T Consensus 150 ~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~ 229 (477)
T TIGR01301 150 TRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDF 229 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccc
Confidence 5899999999999999999999986567777887777788889999999999999999999999999999986433221
Q ss_pred CCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCCCCCCccchHHHHHHHhccCCHH
Q 012185 160 HLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPA 239 (469)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~mP~~ 239 (469)
+.+| . + + .+ + .+..+.++++++++++|||+
T Consensus 230 ~~~~----~------------------------------------~---~-~~---~---~~~~~~~~~i~~~~~~mP~~ 259 (477)
T TIGR01301 230 INSE----A------------------------------------A---P-PS---K---HGEEAFFGELFGAFKYLPRP 259 (477)
T ss_pred hhhh----c------------------------------------c---c-cc---c---cchhhhHHHHHHHHHHCCHH
Confidence 0000 0 0 0 00 0 11235689999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC-c
Q 012185 240 MHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG-S 318 (469)
Q Consensus 240 l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig-~ 318 (469)
+|++|++|||+|+||++|++|.||||||++|++++.+ .+.|++|+|+|+|+++++++++.++|++++++.||+| |
T Consensus 260 m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~----~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~ 335 (477)
T TIGR01301 260 VWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQ----GAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAG 335 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcc----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999997642 4689999999999999999999999999999999998 5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhcccCC-CcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCC
Q 012185 319 RLVWAISNFIVFACMATTAIISVISVREYSG-GIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGG 397 (469)
Q Consensus 319 r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~ 397 (469)
|++|.+|++++++||+.+.+++.++++.... .....++++..+++.++++++++|++|++++|+||+|+++++|+++++
T Consensus 336 k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~~~ 415 (477)
T TIGR01301 336 KRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLGAG 415 (477)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccCCC
Confidence 8999999999999999999887543211010 011123344456799999999999999999999999999999987789
Q ss_pred ccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccCCCCC
Q 012185 398 QGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSSN 459 (469)
Q Consensus 398 ~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpet~g~ 459 (469)
+|+|||++|+++++||+++++..|++.+++|+++.+++.++|++++++++++++.+|.++.+
T Consensus 416 ~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~~~~~ 477 (477)
T TIGR01301 416 QGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPRPRVD 477 (477)
T ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 99999999999999999999999998899998888999999999999999999999998753
No 2
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.4e-61 Score=482.67 Aligned_cols=388 Identities=41% Similarity=0.744 Sum_probs=325.6
Q ss_pred CeeehhHHHHHHHHHhhcchhhHhhhcCCCcccccccCCCccchhhHHHHHHHHHhccccccchhHHHHHhcCCCccchh
Q 012185 2 HIKVRKKTAIYSCRMSDDFCCYIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRN 81 (469)
Q Consensus 2 pfi~~g~~~~~i~llll~~~~~i~~~l~d~~~~~~~~~~~~~~~i~~~v~g~~llD~a~n~~~~p~rAli~D~~p~~qr~ 81 (469)
|||+.+++++.+++.+++|+.||+..++|+.+ ...|+++++++++|+|++|+++|++|+|+|||+.|++.++||.
T Consensus 103 PfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~-----~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~ 177 (498)
T KOG0637|consen 103 PFILAGSLLIAVSLFLIGYAADIGLLLGDNER-----KPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKK 177 (498)
T ss_pred chHHHhhHHHHHHHhhhhhHhhhhHHhcCCcc-----cccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhh
Confidence 99999999999999999999999999999875 4488999999999999999999999999999999999998888
Q ss_pred h-HHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHHhhheeEEeeccCCCCCCC-C
Q 012185 82 S-ANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQP-N 159 (469)
Q Consensus 82 ~-a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~~~it~~~v~E~p~~~~~~-~ 159 (469)
+ ||+++++|+++|+++||.+|++.+|++.++|+.+.+|+..|.+.|..|...+.+..++....+....|+|..+.+. .
T Consensus 178 ~~Ans~f~~f~avGnvLGY~~g~y~~~~~~~~Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~s~~~~~~ 257 (498)
T KOG0637|consen 178 TRANSVFSFFMAVGNVLGYALGSYLGLYKIFPFTLTTACDLYCANLKLCFFLEVTLLLIETSESLWYPQEKPLSPKGTTA 257 (498)
T ss_pred hccchhHHHHHHhcceeeeecccccCceEEeehHHHHHHHHHHHHHHHHHHHhhhhhheecccccccccccCCCCCcccc
Confidence 7 9999999999999999999998899999999988899999999999999998888877777766666666544320 0
Q ss_pred CCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCCCCCCccchHHHHHHHhccCCHH
Q 012185 160 HLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPA 239 (469)
Q Consensus 160 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~mP~~ 239 (469)
+. .. .....+-+++.++++||++
T Consensus 258 ~~-------------------------------------------------~~--------~~~~~~~e~fG~~~~mpr~ 280 (498)
T KOG0637|consen 258 RS-------------------------------------------------KS--------SKLPFLLEIFGALKVMPRP 280 (498)
T ss_pred cc-------------------------------------------------cc--------cCcchHHHHhchHhhCChh
Confidence 00 00 0012234777899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCC--hhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC
Q 012185 240 MHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGND--HEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 317 (469)
Q Consensus 240 l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~--~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig 317 (469)
+|++|++++++|+||+++++|+||||||++|+|||++++ ++.+.||+||++|||||++|+++..++|+.++++.||+|
T Consensus 281 m~~L~i~~lltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~~~g 360 (498)
T KOG0637|consen 281 MRMLLIVTLLTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSRKFG 360 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999854 778999999999999999999999999999999999999
Q ss_pred -chHHHHHHH-HHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCC
Q 012185 318 -SRLVWAISN-FIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSG 395 (469)
Q Consensus 318 -~r~l~~~s~-~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~ 395 (469)
||+.|...+ +..++|+.++.....+...+..... .-..+....++.++..+...|+.++++.|+||++-++...+++
T Consensus 361 ~r~~y~~~~~~f~~~~~~~gl~~~~~~~~~~~~~~G-~~~~~~~~~p~~l~~~y~~~g~~~a~t~~~pf~~~s~~~~~sg 439 (498)
T KOG0637|consen 361 TRKRYWGGVNAFGLATGLAGLVLNTYVVLSHRSTAG-ILSSPLLTVPYGALALYAILGIPLAITFSIPFALASIEIGNSG 439 (498)
T ss_pred cceEEeehhHHHHHHHHHHhhhhhHHHHHHHHhhcc-eeecchhcccHHHHHHHHHhCCccccccccccccccccccCcc
Confidence 556555555 5666666655443333222111000 0011233457888999999999999999999999998888888
Q ss_pred CCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhc
Q 012185 396 GGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLK 452 (469)
Q Consensus 396 ~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~ 452 (469)
+++|+++|++|+++++||++++...|++++++|+++...|..+++..+++.+.+++.
T Consensus 440 ~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~~~~~~~a~s~~~~~i~al~v 496 (498)
T KOG0637|consen 440 LGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNLPAFVSGAVALLIGGIVALLV 496 (498)
T ss_pred CCCCceeeeeeeeeeehhheeeccccchhhhcCCcchhHHHHHHHHHHHHHHHheEe
Confidence 999999999999999999999999999999999998888888888888777755443
No 3
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.92 E-value=4.4e-24 Score=222.44 Aligned_cols=344 Identities=15% Similarity=0.154 Sum_probs=242.2
Q ss_pred HHHHHHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhH
Q 012185 48 VFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLK 127 (469)
Q Consensus 48 ~~v~g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~ 127 (469)
+.++|=.++.++....++-...|+.|++|++.||......++...+|.++|-.+|.- +++ ++ ...|.
T Consensus 118 ~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~----~il---Gt------~~~W~ 184 (485)
T KOG0569|consen 118 MLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLP----SLL---GT------EDLWP 184 (485)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccH----Hhc---CC------CcchH
Confidence 556777788888888999999999999999999999999999999999999877742 232 22 24688
Q ss_pred HHHHHHHHHHHHHhhheeEEeeccCCCCCC-CCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhh
Q 012185 128 AAFLVAVVFLTLCALVTIYFADEVPLTVNQ-PNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKH 206 (469)
Q Consensus 128 ~~f~i~~i~~~i~~~it~~~v~E~p~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (469)
+.+.+..++.++.++ .+.++||+|.+... +++.+||++.++.-+. +.+ .+.+.|...++
T Consensus 185 ~l~~~~~i~~~~~l~-~l~~~PESPk~Ll~~k~~~~~A~~sl~~y~G------------------~~~-~~~~~e~~~~e 244 (485)
T KOG0569|consen 185 YLLAFPLIPALLQLA-LLPFLPESPKYLLIKKGDEEEARKALKFYRG------------------KED-VEAEIEEMLRE 244 (485)
T ss_pred HHHHHHHHHHHHHHH-HHhcCCCCcchHHHHcCCHHHHHHHHHHHhC------------------CCc-chhHHHHHHHH
Confidence 999999998876555 46789999998766 5555555433211111 000 00011111111
Q ss_pred hhccccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHH-HHHHHhhhhhhhhhceeecCCCCCCChhhhhHH
Q 012185 207 ISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWL-SWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYD 285 (469)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~-g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~ 285 (469)
++.... + +....++++++++ +++.+++...+.+++.+.+ |.++..+|.|+...+.-+.. +
T Consensus 245 ~~~~~~---~---~~~~~sl~~~~~~-~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~------------~ 305 (485)
T KOG0569|consen 245 IEEEEL---E---KKKQISLRQLLKN-PTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTP------------E 305 (485)
T ss_pred HHHhcc---c---cccCCcHHHHhcC-cchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCH------------H
Confidence 111100 1 1134578888876 3555667777888888755 99999999999776644432 1
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHH
Q 012185 286 QGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVAS 365 (469)
Q Consensus 286 ~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (469)
+ ..++....++++.+++++.+.++||+|||++++++..+++++...+.......+. ... +..+......
T Consensus 306 ~----a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~-----~~~--~~~y~~i~~~ 374 (485)
T KOG0569|consen 306 E----AQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNS-----FGS--WLSYLCIAAI 374 (485)
T ss_pred H----HHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHH-----hhh--HHHHHHHHHH
Confidence 1 2355566678999999999999999999999999998888877655543322111 000 0001112233
Q ss_pred HHHHHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHH
Q 012185 366 LVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAG 445 (469)
Q Consensus 366 ~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~lia 445 (469)
+..+..++++-+ .+||-+.+|.+|.+ .+...+++.....|+.++++...++++-+..|. ..|+.+.+.+.+.
T Consensus 375 ~~~~~~f~~G~g---pi~~fi~aELf~~~--~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~---~~filF~i~~~~~ 446 (485)
T KOG0569|consen 375 FLFIISFAIGPG---PIPWFIGAELFPQS--ARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP---YVFILFVIPLAIF 446 (485)
T ss_pred HHHHHhhhcCCC---chhHHHHHHhCCcc--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---hhhHHHHHHHHHH
Confidence 344444555555 56777999999987 677789999999999999999999999999985 4788888888899
Q ss_pred HHHhhhcccCCCCCCcc
Q 012185 446 GVVATLKLPHLSSNSFR 462 (469)
Q Consensus 446 ai~~~~~vpet~g~~~~ 462 (469)
+++.++.+||||||++.
T Consensus 447 ~i~~~~~lPETkgr~~~ 463 (485)
T KOG0569|consen 447 LIYLYRYLPETKGRTPY 463 (485)
T ss_pred HHHHHHhCcccCCCCHH
Confidence 99999999999999874
No 4
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.86 E-value=3.3e-20 Score=193.70 Aligned_cols=308 Identities=19% Similarity=0.194 Sum_probs=223.9
Q ss_pred CeeehhHHHHHHHHHhhcchhhHhhhcCCCcccccccCCCccchhhHHHHHHHHHhccccccchhHHHHHhcCCC-ccch
Q 012185 2 HIKVRKKTAIYSCRMSDDFCCYIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARALLADLSG-PDQR 80 (469)
Q Consensus 2 pfi~~g~~~~~i~llll~~~~~i~~~l~d~~~~~~~~~~~~~~~i~~~v~g~~llD~a~n~~~~p~rAli~D~~p-~~qr 80 (469)
|||++|++...+++.++.+....+. ......+...+..+++|++.+.++.|.+|+++|+++ ++||
T Consensus 73 p~~l~g~i~~~~~~~llf~~~p~~~--------------~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R 138 (428)
T PF13347_consen 73 PWILIGAILLALSFFLLFSPPPAGL--------------SFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDER 138 (428)
T ss_pred eEeehhhHHHHHHHHHhhccccchh--------------hhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhh
Confidence 8899999999998888886522100 001133344667777899999999999999999998 5899
Q ss_pred hhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHHhhheeEEeeccCCCCCCCCC
Q 012185 81 NSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNH 160 (469)
Q Consensus 81 ~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~~~it~~~v~E~p~~~~~~~~ 160 (469)
.+..++.+.+..+|.++...+.... + .+..++. ....++++..+.+++.+++..++++.+||++....+++
T Consensus 139 ~~l~~~~~~~~~~g~~l~~~~~~~l-~----~~~g~~~---~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~~~~~- 209 (428)
T PF13347_consen 139 TRLSSWRMIFSMIGSLLASFLAPIL-V----SWFGGGD---TSNGYRWMALVLAIVGLVFFLITFFFVKERSVEVTEQE- 209 (428)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhh-h----hhhccCc---cchHHHHHHHHHHHHHHHHhhhhhheeeeccccccccc-
Confidence 9999999999999997666555432 1 1111110 01268999999999999999999999999211111000
Q ss_pred CCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCCCCCCccchHHHHHHHhccCCHHH
Q 012185 161 LTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAM 240 (469)
Q Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~mP~~l 240 (469)
.+.++++.++++++. |++
T Consensus 210 -------------------------------------------------------------~~~~~~~~~~~~~~n-r~~ 227 (428)
T PF13347_consen 210 -------------------------------------------------------------KKISLRDSLRSLFRN-RPF 227 (428)
T ss_pred -------------------------------------------------------------cccccccchhhhccc-chH
Confidence 111233334444443 568
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchH
Q 012185 241 HVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRL 320 (469)
Q Consensus 241 ~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~ 320 (469)
++++...++.|.++.....+...|..+ +.+.+ ........+..+.+.+.+.+.+++.||+|+|+
T Consensus 228 ~~l~~~~~~~~~~~~~~~~~~~y~~~~-vl~~~---------------~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~ 291 (428)
T PF13347_consen 228 RILLLAFFLQWLAFALMNTFLPYYFTY-VLGNE---------------GLISIFMLIFFVASIVGSPLWGRLSKRFGKKK 291 (428)
T ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHHH-HhcCc---------------hhhHHHHHHHHHHHHHHHHHHHHHHHHcccee
Confidence 888999998888887766555554443 22211 01112333566778888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCC-----C
Q 012185 321 VWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADS-----G 395 (469)
Q Consensus 321 l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~-----~ 395 (469)
.+..+.++.+++++...+... .+.+..++...+.|++++....+|+++++|..+.+ +
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~ 353 (428)
T PF13347_consen 292 VYIIGLLLAALGFLLLFFLGP------------------GSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGR 353 (428)
T ss_pred ehhhhHHHHHHHHHHHHHHHh------------------hhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCC
Confidence 999999999888877666641 14677888889999999999999999999998743 4
Q ss_pred CCccchhhHHHHHHHHHHHHHhhccccceeccc
Q 012185 396 GGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFG 428 (469)
Q Consensus 396 ~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g 428 (469)
|..|..+|+.+++.-++|.+++.+.+.+++..|
T Consensus 354 r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 354 RREGMYFSVNSFFIKIGQGLAGAIVGLLLALVG 386 (428)
T ss_pred CchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhC
Confidence 678999999999999999999998988877665
No 5
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.83 E-value=4.8e-20 Score=197.10 Aligned_cols=346 Identities=12% Similarity=0.127 Sum_probs=226.8
Q ss_pred HHHHHHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhH
Q 012185 48 VFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLK 127 (469)
Q Consensus 48 ~~v~g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~ 127 (469)
...+|=++..++....+...+.|++|++|++.|+...+..+.+..+|..+||++|... ++. + .+||
T Consensus 144 ~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~--~~~-~-----------~~Wr 209 (513)
T KOG0254|consen 144 QLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGT--SKV-Y-----------AGWR 209 (513)
T ss_pred HHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhh--ccC-C-----------ccHH
Confidence 3445666777888888899999999999999999999999999999999999998752 110 0 2689
Q ss_pred HHHHHHHHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhh
Q 012185 128 AAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHI 207 (469)
Q Consensus 128 ~~f~i~~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (469)
.++.+..++.++..+. +++.||+|++..++++.++++..++..... + +.+.+.+.+++
T Consensus 210 ~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a~~~l~~l~g~-----------------~----~~~~~~~~~~~ 267 (513)
T KOG0254|consen 210 IPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEAKRSLKRLRGL-----------------S----PEDVEVELELL 267 (513)
T ss_pred HHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHHHHHHHHHhCC-----------------C----CcchHHHHHHH
Confidence 9999999998777766 899999999988877655544322111110 0 01111111111
Q ss_pred h-ccccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHH-HHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHH
Q 012185 208 S-KKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIV-MALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYD 285 (469)
Q Consensus 208 ~-~~~~~~~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~-~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~ 285 (469)
. ...++... ......++++++ +++.++...-+.. .|.++.|++.+++|.++.+....+..+
T Consensus 268 ~~~~~~~~~~---~~~~~~~~~l~~--~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~g~~~~------------ 330 (513)
T KOG0254|consen 268 KIKLLVEAEV---AEGKASWGELFS--PKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSAGLKSD------------ 330 (513)
T ss_pred HHHHHHhhhc---ccccccHHHhcC--cchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhcCCCCc------------
Confidence 0 00000000 001112444444 3344544443444 455677999999999998765333221
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHH
Q 012185 286 QGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVAS 365 (469)
Q Consensus 286 ~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (469)
. .+...+.+++.++.+++...++||+|||++++.|...+++|+..++........+..... ..++......
T Consensus 331 ~-----~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 401 (513)
T KOG0254|consen 331 T-----FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSK----GAGWLAIVFL 401 (513)
T ss_pred h-----HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCccc----chhHHHHHHH
Confidence 0 234455567777788888999999999999999999999999887776543211000000 0012233444
Q ss_pred HHHHHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHH
Q 012185 366 LVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAG 445 (469)
Q Consensus 366 ~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~lia 445 (469)
.+....+.+++++. ||.+.+|.+|.+ -+++..++-....++-+.+++..+....+..+ ....|...+..+.++
T Consensus 402 ~~~v~~f~~g~g~v---~w~~~sEifp~~--~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~--~~~~f~~f~~~~~~~ 474 (513)
T KOG0254|consen 402 CLFIFSFAIGWGPV---PWVIVSEIFPLR--LRSKGASLAVAVNWLWNFLISFFFPFITEALG--IGGTFGYFGGICLLS 474 (513)
T ss_pred HHHHHHHhcccccc---hhhhhhccCcHh--HHhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc--ccchHHHHHHHHHHH
Confidence 45555666666654 555999999987 56666999999999999999888777766544 113455555555555
Q ss_pred HH-HhhhcccCCCCCCcc
Q 012185 446 GV-VATLKLPHLSSNSFR 462 (469)
Q Consensus 446 ai-~~~~~vpet~g~~~~ 462 (469)
.+ ++.+.+|||||++..
T Consensus 475 ~~~fv~~~~pETkg~sle 492 (513)
T KOG0254|consen 475 LIIFVFFFVPETKGLTLE 492 (513)
T ss_pred HHHHheEEcccCCCCcHH
Confidence 55 799999999999976
No 6
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.78 E-value=2.7e-17 Score=171.29 Aligned_cols=344 Identities=15% Similarity=0.106 Sum_probs=221.1
Q ss_pred HHHHHHHHhhcchhhHhhhcCCCcccccccCCCccchhhH---HHHHH----------------------HHHhcccccc
Q 012185 9 TAIYSCRMSDDFCCYIGYILGDTKEHCSKFRGTRTRAAFV---FVIGF----------------------WLLDLANNTV 63 (469)
Q Consensus 9 ~~~~i~llll~~~~~i~~~l~d~~~~~~~~~~~~~~~i~~---~v~g~----------------------~llD~a~n~~ 63 (469)
.+..++.+.-+..+.+...+.|+.. +|.+++|||.++- ..++. .+++.+....
T Consensus 39 ~i~~~~~i~~~i~~p~~G~lsDr~~--~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (437)
T TIGR00792 39 TLFLVARILDAITDPIMGNIVDRTR--TRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILLGLFYSFV 116 (437)
T ss_pred HHHHHHHHHHHhccchheEeeecCC--CCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhh
Confidence 4445555666777777778888764 5667778876531 11111 2234444555
Q ss_pred chhHHHHHhcCCC-ccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHHhh
Q 012185 64 QGPARALLADLSG-PDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCAL 142 (469)
Q Consensus 64 ~~p~rAli~D~~p-~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~~~ 142 (469)
+.|..++.+|+.+ +++|++++++.+.+..+|+.++..+.... ....... .....||+++.+.+++.+++..
T Consensus 117 ~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l-----~~~~~~~---~~~~g~~~~~~i~~~l~~~~~~ 188 (437)
T TIGR00792 117 NIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPL-----VSYFGGG---DDKFGWFMFALVLALIGVVSLI 188 (437)
T ss_pred cccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHhCCC---cccccHHHHHHHHHHHHHHHHH
Confidence 6789999999984 68999999999999999888776554321 1111100 0023688888888888777777
Q ss_pred heeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCCCCCCc
Q 012185 143 VTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGP 222 (469)
Q Consensus 143 it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (469)
+....+||++....++ + + .
T Consensus 189 ~~~~~~~e~~~~~~~~-~---------------------------------------------------~---------~ 207 (437)
T TIGR00792 189 ICFFGTKERYSEIPKN-I---------------------------------------------------E---------K 207 (437)
T ss_pred HHHcCCEecCCCCCcc-c---------------------------------------------------c---------c
Confidence 7778888865210000 0 0 0
Q ss_pred cchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHH
Q 012185 223 GAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVL 302 (469)
Q Consensus 223 ~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~ 302 (469)
+.++++.++.+.+ .|+++.+++..++.+.+++.+..+.+.|..+ .++ ++ + ..+ +...+..+..
T Consensus 208 ~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~----------~---~~~-~~~~~~~i~~ 270 (437)
T TIGR00792 208 KLSLKQIFKALFK-NDQLLILCLAYLFYNLAFNIKNGVQVYYFTY-VLG-DP----------E---LFS-YMGSIAIVAG 270 (437)
T ss_pred CCCHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHcchhheeEee-ecC-Ch----------H---HHH-HHHHHHHHHH
Confidence 1122333343333 3567778888888888877765555444432 332 21 1 112 2333456777
Q ss_pred HHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccc
Q 012185 303 GVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSV 382 (469)
Q Consensus 303 ~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~v 382 (469)
.+.+.+.+++.||+|+|+++.++.++.+++++...+.. + +.+..++.+.+.|++++....+
T Consensus 271 ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~----~---------------~~~~~~~~~~~~g~~~~~~~~~ 331 (437)
T TIGR00792 271 LIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAG----S---------------NLPLILVLIILAGFGQNFVTGL 331 (437)
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcc----h---------------hHHHHHHHHHHHHHHHHHHHHH
Confidence 88888999999999999999998887777665443321 1 2344556667789999999999
Q ss_pred cchhhhccccC-----CCCCccchhhHHHHHHHHHHHHHhhccccceecccCcc-------------chHHHHHHHHHHH
Q 012185 383 PFAITAELTAD-----SGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGN-------------IPAFVLASLSALA 444 (469)
Q Consensus 383 P~aLise~~p~-----~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~-------------~~~f~~~~v~~li 444 (469)
++++++|..+. ..|..|...|+.|.+..+++.+.+.+.|.+.+..|.+. .....+.+++.++
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~~~~~~~~~~~~~~~~~~~~~p~i~~~~ 411 (437)
T TIGR00792 332 VWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYVANAAQSPITLNGIKILMFAVPALFLLL 411 (437)
T ss_pred HHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcCCcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988752 23568999999999999999999999988876654211 0124445566666
Q ss_pred HHHHhhhcccCCCCC
Q 012185 445 GGVVATLKLPHLSSN 459 (469)
Q Consensus 445 aai~~~~~vpet~g~ 459 (469)
+.++.+++.|.|+.+
T Consensus 412 ~~~~~~~~y~l~~~~ 426 (437)
T TIGR00792 412 AAIIIGRFYKLTEKK 426 (437)
T ss_pred HHHHHHHHeeCcHHH
Confidence 666444367776543
No 7
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.78 E-value=1.2e-17 Score=178.12 Aligned_cols=359 Identities=11% Similarity=0.017 Sum_probs=199.5
Q ss_pred HHHHHHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccch--hhhhhcccchh----h--
Q 012185 48 VFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSW--HRWFPFLTSRA----C-- 119 (469)
Q Consensus 48 ~~v~g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w--~~~~~~~~~~~----~-- 119 (469)
..+++-.+..++......+..+|+.|.+|+++|+++.++.+.+..+|.++|..++..... .+.... .+.. +
T Consensus 117 ~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 195 (502)
T TIGR00887 117 TLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEA-AADEASCTGSC 195 (502)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc-ccccccccccc
Confidence 344556667788888889999999999999999999999999999999998877753100 000000 0000 0
Q ss_pred -hcccchhHHHHHHHHHHHHHHhhheeEEeeccCCCCCCCCCCC-CCCCCCCCcccccccccCCCCCCCCCCCCCCccCC
Q 012185 120 -CAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLT-DSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESG 197 (469)
Q Consensus 120 -~~~~~~~~~~f~i~~i~~~i~~~it~~~v~E~p~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (469)
......||.+|.+.+++.++..+ ..+.+||+|+|...+++.+ ++++.+.+... . + .+ +
T Consensus 196 ~~~~~~~WR~~~~~~~ip~~i~~~-~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~--------~---------~-~~-~ 255 (502)
T TIGR00887 196 VPAVDYMWRILIGFGAVPALLALY-FRLTIPETPRYTADVAKDVEQAASDMSAVLQ--------V---------K-IE-A 255 (502)
T ss_pred cchhcccHHHHHHHHHHHHHHHHH-HHHhCCCCHHHHHHhCcchHHHHHHHHHHhc--------c---------c-cc-c
Confidence 00012599999999888765544 3568999999876544432 12211110000 0 0 00 0
Q ss_pred cccchhhhhhhccccccCCCCCCCccchHHHHHHHhccCCHHHHHH---HHHHHHHHHHHHHHhhhhhhhhhceeecCCC
Q 012185 198 HESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVV---LIVMALTWLSWFPFFLFDTDWMGREVYHGDP 274 (469)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~mP~~l~~l---~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~ 274 (469)
...+ .++ ..++ + +..+.+++++++.. +.++..++. +...+..-+.++....|.++++.+.-+ ++
T Consensus 256 ~~~~--~~~---~~~~--~---~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~G~--~~ 322 (502)
T TIGR00887 256 EPDE--VEK---ASTA--V---EVPKASWSDFFTHF-FKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAIGY--SP 322 (502)
T ss_pred Cccc--ccc---hhcc--c---cchhhhHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHcC--CC
Confidence 0000 000 0000 0 00123466666531 111222221 222232223344455556666654222 21
Q ss_pred CCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccC
Q 012185 275 KGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHG 354 (469)
Q Consensus 275 ~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~ 354 (469)
.... ...|++-.........+..+...+..++.+.++||+|||++.+++..+.++++..+++..... +
T Consensus 323 ~~~~--~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~-~--------- 390 (502)
T TIGR00887 323 PAAT--NNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHL-S--------- 390 (502)
T ss_pred Cccc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhc-c---------
Confidence 1100 011211111111112223344455677789999999999999888888877776555432100 0
Q ss_pred CCCchhHHHHHHHHH-HHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccC----
Q 012185 355 IGANQAIKVASLVVF-TLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGG---- 429 (469)
Q Consensus 355 ~~~~~~~~~~~~~~~-~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~---- 429 (469)
........+++ ...+.++.. +++.+.+|++|.+ .+|+.+|+.|...++..++.+.+.|.+.+..+.
T Consensus 391 ----~~~~~~~~~~~~~~~~~~~~~---~~~~~~~E~~p~~--~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 461 (502)
T TIGR00887 391 ----THGFLAIYVLAQFFANFGPNA---TTFIVPGEVFPTR--YRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGY 461 (502)
T ss_pred ----hhHHHHHHHHHHHHHhcCCCc---hhhhhhhccCchh--HHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccc
Confidence 00111122121 222343433 4556889999986 677779999999999999999999988764321
Q ss_pred ----ccchHHHHHHHHHHHHHHHhhhcccCCCCCCcc
Q 012185 430 ----GNIPAFVLASLSALAGGVVATLKLPHLSSNSFR 462 (469)
Q Consensus 430 ----~~~~~f~~~~v~~liaai~~~~~vpet~g~~~~ 462 (469)
+....|.+.++++++++++ .+++||||||+..
T Consensus 462 ~~~~~~~~~~~i~~~~~~~~~i~-~~~lpEt~~~~le 497 (502)
T TIGR00887 462 PTGIWMGHVLEIFALFMFLGILF-TLLIPETKGKSLE 497 (502)
T ss_pred cccccchHHHHHHHHHHHHHHHH-heEeccCCCCCHH
Confidence 1124677778888888774 5788999999764
No 8
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.75 E-value=1.4e-17 Score=183.49 Aligned_cols=372 Identities=13% Similarity=0.115 Sum_probs=209.6
Q ss_pred HHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhcccccc----chhhhhhcccchhhhcccchhH
Q 012185 52 GFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASG----SWHRWFPFLTSRACCAACGNLK 127 (469)
Q Consensus 52 g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~----~w~~~~~~~~~~~~~~~~~~~~ 127 (469)
+-++.-++.........+++.|.+|+++|++..++.+.+..+|.+++..++... .|.... +. ......||
T Consensus 261 ~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~----g~--~~~~~gWR 334 (742)
T TIGR01299 261 CRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQM----GS--AYQFHSWR 334 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhcc----cc--ccccccHH
Confidence 344566677777888999999999999999999999999999999987665321 111100 00 00123699
Q ss_pred HHHHHHHHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCccccccc-ccCCCCCCCCCCCCCCccCCcccchhhhh
Q 012185 128 AAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAIS-KSKHDMPAAPNANGNKVESGHESDANLKH 206 (469)
Q Consensus 128 ~~f~i~~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (469)
++|++.+++.+++++ ..+++||+|.|...+++.+++.+.++.......+ +.++.. .... +..+ ...++.+..+
T Consensus 335 ~l~~i~~lp~ll~ll-~~~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~--~~~~--~~~~-~~~~~~~~~~ 408 (742)
T TIGR01299 335 VFVIVCAFPCVFAIG-ALTFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEK--VFSV--NHIK-TIHQEDELIE 408 (742)
T ss_pred HHHHHHHHHHHHHHH-HHHHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhH--HHHH--HHHH-Hhhhhhhhhc
Confidence 999998888766554 4677999999987776655554443322110000 000000 0000 0000 0000000000
Q ss_pred hhccccccCCCCCCCccchHHHHHHHhcc--CC---HHHHHHHHHHHHHHHHHHHHhhhhhhhhhce----------eec
Q 012185 207 ISKKAEDTNGSFNDGPGAVLVNLLTSLRH--LP---PAMHVVLIVMALTWLSWFPFFLFDTDWMGRE----------VYH 271 (469)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--mP---~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~----------vf~ 271 (469)
.++..+...++...........+|..++. -| +....+|++.|..-++++.+..++++.+.+. .++
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~ 488 (742)
T TIGR01299 409 IESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFP 488 (742)
T ss_pred ccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 00000000000000000111222222221 12 1222345566666678888888888765331 011
Q ss_pred CCCCC----------------------------------CC-------h---hhhh------------HH-----H----
Q 012185 272 GDPKG----------------------------------ND-------H---EVKF------------YD-----Q---- 286 (469)
Q Consensus 272 g~~~~----------------------------------~~-------~---~~~~------------y~-----~---- 286 (469)
++... ++ + +... |+ .
T Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~ 568 (742)
T TIGR01299 489 GDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFID 568 (742)
T ss_pred ccchhccccccchhhhhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhh
Confidence 00000 00 0 0000 00 0
Q ss_pred -------------H-----------hHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhh
Q 012185 287 -------------G-----------VREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVI 342 (469)
Q Consensus 287 -------------g-----------v~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~ 342 (469)
| .....+...+.++..++..++.++++||+|||++.+++.++.+++++.+++...
T Consensus 569 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s- 647 (742)
T TIGR01299 569 SEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNS- 647 (742)
T ss_pred hhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcc-
Confidence 0 001123344566777888899999999999999999998888887766665431
Q ss_pred hhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhcccc
Q 012185 343 SVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGP 422 (469)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~ 422 (469)
....+++..++|+..+....+.+++++|.+|.+ .+|+.+|+.+...-++.++.+.+.+.
T Consensus 648 -------------------~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~--~Rgta~Gi~~~~~rlGaiigp~i~g~ 706 (742)
T TIGR01299 648 -------------------ESAMIALLCLFGGLSIAAWNALDVLTVELYPSD--KRATAFGFLNALCKAAAVLGILIFGS 706 (742)
T ss_pred -------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH--HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122233333455555555556678999999987 57888999999999999999988887
Q ss_pred ceecccCccchHHHHHHHHHHHHHHHhhhcccCCCCCCc
Q 012185 423 WDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSSNSF 461 (469)
Q Consensus 423 l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpet~g~~~ 461 (469)
+.+.. ....|++++++.++++++ ..++|||+|+..
T Consensus 707 L~~~~---~~~pf~i~a~~lll~~ll-~~~LPET~~~~l 741 (742)
T TIGR01299 707 FVGIT---KAAPILFASAALACGGLL-ALKLPDTRGQVL 741 (742)
T ss_pred HHHhh---hHHHHHHHHHHHHHHHHH-HHhCCCCccccc
Confidence 76532 235678888888887774 446699999854
No 9
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.74 E-value=2.2e-21 Score=203.09 Aligned_cols=343 Identities=15% Similarity=0.171 Sum_probs=213.6
Q ss_pred HHHHHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHH
Q 012185 49 FVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKA 128 (469)
Q Consensus 49 ~v~g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~ 128 (469)
..++-.+.-++....+.....|+.|.+|++.|++..++.+....+|.+++++++... .+.. + ..+||.
T Consensus 105 ~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~--~~~~----~------~~~Wr~ 172 (451)
T PF00083_consen 105 LLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIV--SYYS----D------NWGWRI 172 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccc----c------cccccc
Confidence 334556677788888999999999999999999999999999999999988887541 1110 0 136899
Q ss_pred HHHHHHHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhh
Q 012185 129 AFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHIS 208 (469)
Q Consensus 129 ~f~i~~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (469)
.+.+.+++.++. .+..+++||+|+|..++++.+||++.+++.++.... +.+.+.+.++
T Consensus 173 ~~~~~~~~~l~~-~~~~~~~pESP~wL~~~~~~~~A~~~l~~~~~~~~~-------------------~~~~~~~~~~-- 230 (451)
T PF00083_consen 173 LLIFGAIPSLLV-LLLRFFLPESPRWLLSKGRDEEAEKVLRKLRGKEIE-------------------DEEIEEIKAE-- 230 (451)
T ss_pred cccccccccccc-cccccccccccceecccccccccccccccccccccc-------------------cccccccccc--
Confidence 999998887654 456688999999999988888887776552221000 0000000000
Q ss_pred ccccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHH-HHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHH
Q 012185 209 KKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALT-WLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQG 287 (469)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~-w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~g 287 (469)
.+ +. .+.+.+++++++..+ ..+++...+..++++ +.|++.+.+|.+..+.+... ++ . +
T Consensus 231 --~~---~~--~~~~~~~~~l~~~~~-~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~--~~-------~-~--- 289 (451)
T PF00083_consen 231 --KK---ES--QESKASWRDLFRNKK-YRKRLLIALLLQFFQQFSGINFIFYYSPSIFENAGI--SN-------S-F--- 289 (451)
T ss_pred --cc---cc--cccceeeeecccccc-cccccccccccccccccccccccccccccccccccc--cc-------c-c---
Confidence 00 00 001134555555422 223344444444444 56777777777765543211 10 0 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHH
Q 012185 288 VREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLV 367 (469)
Q Consensus 288 v~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (469)
....+.+++..+.+++...++||+|||++++++.++.+++++.++... ....+.+... +........+
T Consensus 290 -----~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~------~~~~i~~~~l 357 (451)
T PF00083_consen 290 -----LATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIF-FLGVSSSSWW------SILSIVFLAL 357 (451)
T ss_pred -----cccccccccccccccccccccccccccccccccccccccccccccccc-cccccccccc------ccccceeeee
Confidence 111223345555666666899999999999999988888776654101 0001000000 0011112222
Q ss_pred HHHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHH
Q 012185 368 VFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGV 447 (469)
Q Consensus 368 ~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai 447 (469)
..+.++.+++ .+++.+.+|.+|.+. +++..|+.+...++..++.+...+.+.+..+. ...+.+.+++++++.+
T Consensus 358 ~~~~~~~g~~---~~~~~~~~ElfPt~~--R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~--~~~~~i~~~~~~i~~i 430 (451)
T PF00083_consen 358 FFAFFSLGWG---PLPWIYTAELFPTKV--RSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGG--WGVFLIFAGVCLIAII 430 (451)
T ss_pred cccccccccc---ccccccccccccccc--cccccccccccccccccccccccccccccccc--cccchhhHHHHHHHHh
Confidence 3334444555 455569999999874 45558898888888888888888887776652 2467777777888888
Q ss_pred HhhhcccCCCCCCccCCC
Q 012185 448 VATLKLPHLSSNSFRSSG 465 (469)
Q Consensus 448 ~~~~~vpet~g~~~~~~~ 465 (469)
++++++||||||+...-.
T Consensus 431 ~~~~~lpET~g~~l~ei~ 448 (451)
T PF00083_consen 431 FVYFFLPETKGKTLEEIQ 448 (451)
T ss_pred heeEEEeeCCCCCHHHHH
Confidence 889999999999976533
No 10
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.74 E-value=7.1e-17 Score=170.20 Aligned_cols=332 Identities=11% Similarity=0.050 Sum_probs=191.8
Q ss_pred HHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHH
Q 012185 52 GFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFL 131 (469)
Q Consensus 52 g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~ 131 (469)
+=.+..++......+..+++.|..|+++|+++.++.+....+|.+++++++... .....+.... ...||+.|.
T Consensus 126 ~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~-~~~~~~~~~~------~~gWr~~f~ 198 (479)
T PRK10077 126 YRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFI-ARSGDASWLN------TDGWRYMFA 198 (479)
T ss_pred HHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-hccCcccccc------cCChHHHHH
Confidence 334455666777788999999999999999999999999999999988776431 1000000000 136999999
Q ss_pred HHHHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccc
Q 012185 132 VAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKA 211 (469)
Q Consensus 132 i~~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (469)
+.+++.+++.+ ..+.+||+|.+..++++.+++++.++ +... ..+.+...++..+..
T Consensus 199 ~~~~~~~~~~~-~~~~l~~s~~~l~~~~~~~~~~~~~~--------~~~~---------------~~~~~~~~~~~~~~~ 254 (479)
T PRK10077 199 SEAIPALLFLM-LLYFVPETPRYLMSRGKQEQAEGILR--------KIMG---------------NTLATQALQEIKHSL 254 (479)
T ss_pred HHHHHHHHHHH-HHHcCCCCcHHHHHcCCHHHHHHHHH--------HHcC---------------ChhHHHHHHHHHHHH
Confidence 88877766554 46678998865432222111100000 0000 000000000000000
Q ss_pred cccCCCCCCCccchHHHHHHHhccCC-HHHH-HHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhH
Q 012185 212 EDTNGSFNDGPGAVLVNLLTSLRHLP-PAMH-VVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVR 289 (469)
Q Consensus 212 ~~~~~~~~~~~~~~~~~l~~~~~~mP-~~l~-~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~ 289 (469)
++ .....+.++ ... ..+. .++...+.+..+++...+|.+++..+ ++.+. +
T Consensus 255 ~~--------~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~--~g~~~----------~---- 306 (479)
T PRK10077 255 DH--------GRKTGGKLL----MFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKT--LGAST----------D---- 306 (479)
T ss_pred HH--------hhhhhhhhc----chhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHH--cCCCC----------c----
Confidence 00 000000000 000 0000 01122333445666777777776654 22211 0
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHH
Q 012185 290 EGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVF 369 (469)
Q Consensus 290 ~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (469)
.+.+..+..++..++.+++.+++.||+|||++++.+.++++++++.+...... + . + .. ..+..+
T Consensus 307 ~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~--~-----~------~--~~-~~~~~~ 370 (479)
T PRK10077 307 IALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYT--Q-----A------P--GI-VALLSM 370 (479)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhc--C-----c------c--cH-HHHHHH
Confidence 11233445667778888999999999999999999999988887766544310 0 0 0 11 112222
Q ss_pred HHhccchhh-hccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccce------ecccCccchHHHHHHHHH
Q 012185 370 TLLGFPLAI-TYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWD------ALFGGGNIPAFVLASLSA 442 (469)
Q Consensus 370 ~~~Gi~~a~-~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~------~~~g~~~~~~f~~~~v~~ 442 (469)
.+++++++. ...+.+++++|..|.+ .+|+.+|+.+....+.+++.+..++.+. +..|. ...|.+.++.+
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~e~~p~~--~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~--~~~~~~~~~~~ 446 (479)
T PRK10077 371 LFYVAAFAMSWGPVCWVLLSEIFPNA--IRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHN--GFSYWIYGCMG 446 (479)
T ss_pred HHHHHHHhccccchhHHHhHhhCChh--HHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccC--ccHHHHHHHHH
Confidence 333333332 2245678999999875 6788899999999999998877665443 23332 35688888888
Q ss_pred HHHHHHhhhcccCCCCCCcc
Q 012185 443 LAGGVVATLKLPHLSSNSFR 462 (469)
Q Consensus 443 liaai~~~~~vpet~g~~~~ 462 (469)
++++++++.+.||||+++..
T Consensus 447 ~~~~~~~~~~~~e~~~~~~~ 466 (479)
T PRK10077 447 VLAALFMWKFVPETKGKTLE 466 (479)
T ss_pred HHHHHHHHhccccCCCCCHH
Confidence 88888777889999998654
No 11
>TIGR00898 2A0119 cation transport protein.
Probab=99.71 E-value=7.5e-17 Score=171.53 Aligned_cols=319 Identities=14% Similarity=0.150 Sum_probs=190.2
Q ss_pred HHHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHH
Q 012185 51 IGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAF 130 (469)
Q Consensus 51 ~g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f 130 (469)
+...+.-++.........+++.|..|+++|+++.++.+...++|.+++.+++... .+||+.|
T Consensus 185 ~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~------------------~~wr~~~ 246 (505)
T TIGR00898 185 VFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFI------------------PDWRWLQ 246 (505)
T ss_pred HHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHh------------------hHHHHHH
Confidence 3445566677778888999999999999999999999888888888877665431 1478888
Q ss_pred HHHHHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhcc
Q 012185 131 LVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKK 210 (469)
Q Consensus 131 ~i~~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (469)
.+.+++.++..+.. +.+||+|.+...+++.+++.+.+++..+ .+.. ..+.+....+ .
T Consensus 247 ~~~~i~~~~~~~~~-~~~~esp~~l~~~~~~~~a~~~l~~~~~-----~~~~--------------~~~~~~~~~~---~ 303 (505)
T TIGR00898 247 LAVSLPTFLFFLLS-WFVPESPRWLISQGRIEEALKILQRIAK-----INGK--------------KLPAEVLSLS---L 303 (505)
T ss_pred HHHHHHHHHHHHHH-HhcCCChHHHHHCCCHHHHHHHHHHHHH-----HcCC--------------CCCHHHHhhh---h
Confidence 88887776555543 6799999876555443332221111000 0000 0000000000 0
Q ss_pred ccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHH
Q 012185 211 AEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVRE 290 (469)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~ 290 (469)
.+++.+ ...+..++++++. +.++...+..++.|+.... .+|...+.-+ .++++ .|
T Consensus 304 ~~~~~~---~~~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~---------~~------ 358 (505)
T TIGR00898 304 EKDLSS---SKKQYSFLDLFRT-----PNLRKTTLCLMMLWFTTAF-SYYGLVLDLG-NLGGN---------IY------ 358 (505)
T ss_pred hhhhhh---ccCCCcHHHHhCC-----hHHHHHHHHHHHHHHHHHH-HHHHHhcccc-ccCCC---------hH------
Confidence 000000 0012345555542 3455555555555655332 2333221111 11211 12
Q ss_pred HHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHH
Q 012185 291 GAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFT 370 (469)
Q Consensus 291 G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (469)
+...+.+++.....++.+++.||+|||++..++.++.+++++.+.+... . ..+..+++..
T Consensus 359 --~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~---~---------------~~~~~~~~~~ 418 (505)
T TIGR00898 359 --LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPV---D---------------LYFLRTALAV 418 (505)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCC---C---------------chHHHHHHHH
Confidence 2223445666777888889999999999999998888877665554431 0 0122223333
Q ss_pred HhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhh
Q 012185 371 LLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVAT 450 (469)
Q Consensus 371 ~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~ 450 (469)
+.++..+....+.+++.+|.+|.+ .+|+.+|+.+....+++++.+.+.+ +.+ .+ ....+.+.+++++++++ ..
T Consensus 419 ~~~~~~~~~~~~~~~~~~e~~p~~--~r~~~~g~~~~~~~ig~~i~p~i~~-~~~-~~--~~~~~~~~~~~~~~~~~-~~ 491 (505)
T TIGR00898 419 LGKFGITSAFQMVYLYTAELYPTV--VRNLGVGVCSTMARVGSIISPFLVY-LGE-KW--LFLPLVLFGGLALLAGI-LT 491 (505)
T ss_pred HHHHHHHHHHHHHHHHhcccccHH--HHhhhHhHHHHHHHHHHHHHhHHHH-HHH-HH--HhhHHHHHHHHHHHHHH-HH
Confidence 334444445556677899999986 5667799999999999999888777 332 22 12457777777777777 45
Q ss_pred hcccCCCCCCcc
Q 012185 451 LKLPHLSSNSFR 462 (469)
Q Consensus 451 ~~vpet~g~~~~ 462 (469)
+++|||+++...
T Consensus 492 ~~lpet~~~~l~ 503 (505)
T TIGR00898 492 LFLPETKGVPLP 503 (505)
T ss_pred HcCcCCCCCCCC
Confidence 678999998654
No 12
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.71 E-value=9.5e-17 Score=167.07 Aligned_cols=346 Identities=13% Similarity=0.140 Sum_probs=195.6
Q ss_pred HHHHHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccc---cccchhhhhhcccchhhhcccch
Q 012185 49 FVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAG---ASGSWHRWFPFLTSRACCAACGN 125 (469)
Q Consensus 49 ~v~g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g---~~~~w~~~~~~~~~~~~~~~~~~ 125 (469)
.+++-.+..++.........+++.|..|+++|+++.++.+...++|.+++++++ ... . . ...
T Consensus 130 ~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~--~-------~------~~~ 194 (481)
T TIGR00879 130 LIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSL--N-------N------TLG 194 (481)
T ss_pred HHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcC--C-------C------Ccc
Confidence 334555666777777888999999999999999999999999999999999888 220 0 0 136
Q ss_pred hHHHHHHHHHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhh
Q 012185 126 LKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLK 205 (469)
Q Consensus 126 ~~~~f~i~~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (469)
||+.|.+.++..++.+ +..+.+||+|.+...+++.+++++ ..++.+.. +. ...+......
T Consensus 195 w~~~f~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~--------~~~~~~~~----------~~-~~~~~~~~~~ 254 (481)
T TIGR00879 195 WRIPLGLQLIPAGLLF-LGLFFLPESPRWLVGKGRVEEARK--------SLARLRGT----------SG-EDKELLDELE 254 (481)
T ss_pred HHHHHHHHHHHHHHHH-HHHhcCCCChHHHHHcCChHHHHH--------HHHHHhCC----------CC-CcHHHHHHHH
Confidence 8999999776665544 445678998754322211100000 00000000 00 0000000000
Q ss_pred hhhccccccCCCCCCCccchHHHHHHHhccC-CHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhH
Q 012185 206 HISKKAEDTNGSFNDGPGAVLVNLLTSLRHL-PPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFY 284 (469)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~m-P~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y 284 (469)
......+.+.+ .....++++++..+.. ++.+..+++..+....++..+.+|.+.+..+ ++-+
T Consensus 255 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~----------- 317 (481)
T TIGR00879 255 LIDIKRSIEKR----SVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN--AGVS----------- 317 (481)
T ss_pred HHHHHHHHHHh----hccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH--cCCC-----------
Confidence 00000000000 0111234444322211 1111112222222223444555666655543 2221
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHH
Q 012185 285 DQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVA 364 (469)
Q Consensus 285 ~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (469)
. ..+.+...+..+...+.+++.+++.||+|||+++.++.++++++++...+......+. ... ..+......
T Consensus 318 -~--~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~ 388 (481)
T TIGR00879 318 -T--DHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTG----SSK--SSGNVAIVF 388 (481)
T ss_pred -c--hHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCC----ccc--chhHHHHHH
Confidence 1 1112344456667788888999999999999999998888887776665432111000 000 000001111
Q ss_pred HHHHHHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHH
Q 012185 365 SLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALA 444 (469)
Q Consensus 365 ~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~li 444 (469)
..+.....|.++. .+.+++++|..|.+ .+|+.+|+.+....+++++.+...+.+.+..|- ...|.+.++++++
T Consensus 389 ~~~~~~~~~~~~~---~~~~~~~~~~~p~~--~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~--~~~f~~~~~~~~~ 461 (481)
T TIGR00879 389 ILLFIAFFAMGWG---PVPWVIVSEIFPLS--LRPKGISIAVAANWLANFIVGFLFPTMLESIGV--GGVFIFFGGLNVL 461 (481)
T ss_pred HHHHHHHHHcccc---CeehhhhhccCChH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc--cceehhHHHHHHH
Confidence 1222222333333 45556889999876 678899999999999999999999888766553 3567888888888
Q ss_pred HHHHhhhcccCCCCCCcc
Q 012185 445 GGVVATLKLPHLSSNSFR 462 (469)
Q Consensus 445 aai~~~~~vpet~g~~~~ 462 (469)
+++.+.++.||+|++..+
T Consensus 462 ~~i~~~~~~~~~~~~~~~ 479 (481)
T TIGR00879 462 GLIFVYFFLPETKGRTLE 479 (481)
T ss_pred HHHHHheecccCCCCChh
Confidence 888788889999988653
No 13
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.70 E-value=2e-15 Score=159.95 Aligned_cols=318 Identities=13% Similarity=0.121 Sum_probs=206.8
Q ss_pred HHHHHHHhhcchhhHhhhcCCCcccccccCCCccchhhHH---H----------------------HHHHHHhccccccc
Q 012185 10 AIYSCRMSDDFCCYIGYILGDTKEHCSKFRGTRTRAAFVF---V----------------------IGFWLLDLANNTVQ 64 (469)
Q Consensus 10 ~~~i~llll~~~~~i~~~l~d~~~~~~~~~~~~~~~i~~~---v----------------------~g~~llD~a~n~~~ 64 (469)
+..++-+.-+.++.+...+.|++. +|++++|||.++-+ . +...+.+++.....
T Consensus 47 i~~i~ri~dai~dp~~G~lsD~t~--sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ 124 (473)
T PRK10429 47 LFLVARIWDAINDPIMGWIVNNTR--SRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMD 124 (473)
T ss_pred HHHHHHHHHHHhhchheeehhcCC--CCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHc
Confidence 345577777788888888889865 78888898865411 1 11123455666678
Q ss_pred hhHHHHHhcCC-CccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHHhhh
Q 012185 65 GPARALLADLS-GPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALV 143 (469)
Q Consensus 65 ~p~rAli~D~~-p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~~~i 143 (469)
.|..|+++|+. +++||.+.+++...+.++|+.++..+... ++...++. .....++.+..+.+++.+++..+
T Consensus 125 ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~-----~~~~~g~~---~~~~g~~~~~~i~~~~~~~~~~~ 196 (473)
T PRK10429 125 IPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLP-----FVNYVGGG---DRGFGFQMFTLVLIAFFIVSTII 196 (473)
T ss_pred chHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHhCCC---chhhhHHHHHHHHHHHHHHHHHH
Confidence 89999999999 58999999999888888886665433321 11111100 00123566777777777777777
Q ss_pred eeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCCCCCCcc
Q 012185 144 TIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPG 223 (469)
Q Consensus 144 t~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (469)
++...||++..+..+.+ + +++
T Consensus 197 ~~~~~~e~~~~~~~~~~---------------------------------------------------~--------~~~ 217 (473)
T PRK10429 197 TLRNVHEVYSSDNQVSA---------------------------------------------------E--------GSH 217 (473)
T ss_pred HHcCceecCCccccccc---------------------------------------------------c--------ccC
Confidence 77778886532111000 0 012
Q ss_pred chHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHH
Q 012185 224 AVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLG 303 (469)
Q Consensus 224 ~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~ 303 (469)
.++++.++.+++. |+++.++...++.+.+......+...|+.. + .+++ + ..+ +.+.+.++..+
T Consensus 218 ~~~~~~~~~~~~n-~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y-~-~~~~-----------~--~~~-~~~~~~~i~~i 280 (473)
T PRK10429 218 LTLKDIVALIYKN-DQLSCLLGMALAYNIASNIINGFAIYYFTY-V-IGDA-----------D--LFP-YYLSYAGAANL 280 (473)
T ss_pred CCHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHhhheeeEEEE-E-CCCH-----------H--HHH-HHHHHHHHHHH
Confidence 2456666665444 778888888888888777766666655432 2 2221 1 112 23334556677
Q ss_pred HHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhcccc
Q 012185 304 VSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVP 383 (469)
Q Consensus 304 i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP 383 (469)
+...+.+++.||+|+|+.+.++.++..++.+...+..... + .+.+..++...+.|++.+.....+
T Consensus 281 i~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~-~--------------~~~~~~~i~~~l~g~~~~~~~~~~ 345 (473)
T PRK10429 281 VTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAA-P--------------HNALLIVIAGILLNIGTALFWVLQ 345 (473)
T ss_pred HHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccC-c--------------hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788889999999999999888776655544333221110 0 023444555667888899888999
Q ss_pred chhhhccccC-----CCCCccchhhHHHHHHHHHHHHHhhccccceeccc
Q 012185 384 FAITAELTAD-----SGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFG 428 (469)
Q Consensus 384 ~aLise~~p~-----~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g 428 (469)
+++++|..+. ..|..|...|..+...-+++.+.+.+.|.+++..|
T Consensus 346 ~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~G 395 (473)
T PRK10429 346 VIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIG 395 (473)
T ss_pred HHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999998653 34678889999999999999999988888776554
No 14
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.70 E-value=1.3e-15 Score=157.15 Aligned_cols=293 Identities=16% Similarity=0.085 Sum_probs=190.2
Q ss_pred HHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHH
Q 012185 52 GFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFL 131 (469)
Q Consensus 52 g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~ 131 (469)
+..+..++......+..+++.|..|+++|++++++......+|..++..++... .+ ..+||..|.
T Consensus 109 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~--~~-------------~~~~~~~~~ 173 (406)
T PRK11551 109 ARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLA--AG-------------DAAWRHIFY 173 (406)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cc-------------ccCHHHHHH
Confidence 445566677777778899999999999999999999999999999998776431 10 125788888
Q ss_pred HHHHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccc
Q 012185 132 VAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKA 211 (469)
Q Consensus 132 i~~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (469)
+.+++.++...+.....||+|.+..++++.
T Consensus 174 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-------------------------------------------------- 203 (406)
T PRK11551 174 VGGVGPLLLVPLLMRWLPESRAFAQAAGAG-------------------------------------------------- 203 (406)
T ss_pred HHHHHHHHHHHHHHHhCCCChhHHhccCcc--------------------------------------------------
Confidence 876665555555556678876432211100
Q ss_pred cccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHH
Q 012185 212 EDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREG 291 (469)
Q Consensus 212 ~~~~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G 291 (469)
+ + .....+.+++.. . .+..+.+++..++.....+.+..|.+.|+.+ ++.++ .+ .|
T Consensus 204 ~---~-----~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~g~s~---------~~----~~ 258 (406)
T PRK11551 204 K---Q-----RAPVLRALFGEG-R-ATATLLLWISYFFTLIVLYFLLNWLPSLLVG--QGLSR---------SQ----AG 258 (406)
T ss_pred h---h-----hhhhHHHHhhhh-h-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCCh---------hh----hh
Confidence 0 0 001112222210 0 1123345555566666666667777777655 22221 01 12
Q ss_pred HHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHH
Q 012185 292 AFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTL 371 (469)
Q Consensus 292 ~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (469)
+....+++...+.+++.+++.||+|||+++..+.+..++++....+.. +.+...+...+
T Consensus 259 -~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~ 317 (406)
T PRK11551 259 -LVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAP--------------------SFAGMLLAGFA 317 (406)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcC--------------------cHHHHHHHHHH
Confidence 334456677888899999999999999998876665555443332221 12334445556
Q ss_pred hccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhh
Q 012185 372 LGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATL 451 (469)
Q Consensus 372 ~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~ 451 (469)
.|+.++....+.++++.|..|++ .+|+.+|+.+....+++.+.+.++|.+.+..++ ....+...+.+.+++.+++++
T Consensus 318 ~g~~~~~~~~~~~~~~~~~~p~~--~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK11551 318 AGLFVVGGQSVLYALAPLFYPTQ--VRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRS-TVGVIGASIPVILVAALAALL 394 (406)
T ss_pred HHHHHHhHHHHHHHHHHHHcchh--hhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCc-hHHHHHHHHHHHHHHHHHHHH
Confidence 77777777778888999999976 678889999999999999999999998876543 235566677777777776665
Q ss_pred cccCCCC
Q 012185 452 KLPHLSS 458 (469)
Q Consensus 452 ~vpet~g 458 (469)
.+++.+.
T Consensus 395 ~~~~~~~ 401 (406)
T PRK11551 395 LVSRPSR 401 (406)
T ss_pred Hhcchhc
Confidence 5555543
No 15
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.68 E-value=3.7e-15 Score=150.81 Aligned_cols=308 Identities=16% Similarity=0.107 Sum_probs=186.1
Q ss_pred HHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHH
Q 012185 53 FWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLV 132 (469)
Q Consensus 53 ~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i 132 (469)
..+..++......+..+++.|..|+++|++++++.+...++|..+|..++... . . ...||+.|.+
T Consensus 89 ~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l-----~----~------~~~~~~~~~~ 153 (399)
T TIGR00893 89 RVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWI-----L----I------HFSWQWAFII 153 (399)
T ss_pred HHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHH-----H----H------hCCchHHHHH
Confidence 34556666677778899999999999999999999999999999998777531 1 0 1257888888
Q ss_pred HHHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhcccc
Q 012185 133 AVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAE 212 (469)
Q Consensus 133 ~~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (469)
.+++.++..++..+..||+|..+....+ +.++. ..+ ..+.+.+ .+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-------~~~-------------------~~~~~~~-------~~ 198 (399)
T TIGR00893 154 EGVLGIIWGVLWLKFIPDPPQKAKWLTE--EEKYI-------VVG-------------------GLLAEQQ-------GK 198 (399)
T ss_pred HHHHHHHHHHHhhheecCCCCccccCCH--HHHhh-------cch-------------------hhccccc-------cc
Confidence 7777666666666667776543211110 00000 000 0000000 00
Q ss_pred ccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHH
Q 012185 213 DTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGA 292 (469)
Q Consensus 213 ~~~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~ 292 (469)
+ + +......++++++. +.++.+++..++.+.++..+..|.+.|+.+. ++.++ + ..|
T Consensus 199 ~--~--~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----------~---~~~- 254 (399)
T TIGR00893 199 G--P--STPKKYQIKELLKD-----RRVWGLALGQFLVNIGLGFFLTWFPTYLVQE-RGLSI----------L---EAG- 254 (399)
T ss_pred c--c--cCCCccchHHHhcC-----HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH-hcccH----------H---Hhh-
Confidence 0 0 00112233333332 4577778888888888888888898887652 23221 1 112
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHH-HHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHH
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWA-ISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTL 371 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~-~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (469)
+...+..+...+.+.+.+++.||++||+... .......++.+...+..... +. ....+..+....+
T Consensus 255 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------------~~~~~~~~~~~~~ 321 (399)
T TIGR00893 255 FMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFAT-NY------------VNIPYAALALVAL 321 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHh-cc------------chhHHHHHHHHHH
Confidence 3344566777888899999999999986211 11111111211111111000 00 0012223333333
Q ss_pred hccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhh
Q 012185 372 LGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATL 451 (469)
Q Consensus 372 ~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~ 451 (469)
.+...+ ...+.+++++|..|++ .+|+.+|+.+....+++.+.+.+.|.+.+..|.. ...|.+.+++.+++.+..++
T Consensus 322 ~~~~~~-~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~-~~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 322 GFFGLG-AGAIGWALISDNAPGN--IAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSF-AGALMVVAALALIGALSYLL 397 (399)
T ss_pred HHhchh-hhhHHHHHHHhhcChh--HHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCch-hHHHHHHHHHHHHHHHHHHH
Confidence 333333 5667778999999976 6788999999999999999999999998877632 36788888888887775543
No 16
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.66 E-value=8e-15 Score=155.93 Aligned_cols=311 Identities=10% Similarity=0.085 Sum_probs=171.9
Q ss_pred HHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHH
Q 012185 55 LLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAV 134 (469)
Q Consensus 55 llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~ 134 (469)
+.-++......+..+++.|..|+++|+++.++.+....+|..+|..+.... ..+..... .....||++|.+++
T Consensus 127 l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~-----~~~~~~~~--~~~~gWR~~f~i~~ 199 (490)
T PRK10642 127 AQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLI-----STIVGEAN--FLDWGWRIPFFIAL 199 (490)
T ss_pred HHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHH-----HHhcCHHH--hcCccHHHHHHHHH
Confidence 445666667778899999999999999999998877777777776554321 00000000 00126999999988
Q ss_pred HHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhcccccc
Q 012185 135 VFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDT 214 (469)
Q Consensus 135 i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (469)
++.++++.+ ...+||+|.+..++++.++.+ .+. .+
T Consensus 200 ~~~l~~~~~-~~~~~esp~~~~~~~~~~~~~----------------------------------~~~--------~~-- 234 (490)
T PRK10642 200 PLGIIGLYL-RHALEETPAFQQHVDKLEQGD----------------------------------REG--------LQ-- 234 (490)
T ss_pred HHHHHHHHH-HHcCCCChhHHHHHHhhhhhc----------------------------------ccc--------cc--
Confidence 766554443 457899876532211100000 000 00
Q ss_pred CCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHH
Q 012185 215 NGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFG 294 (469)
Q Consensus 215 ~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~ 294 (469)
+ ....+++++++. .++.+...+...++...+++.+..|.+.|+.+ .++-++ .+ +.+.
T Consensus 235 -~----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~g~s~----------~~----~~~~ 291 (490)
T PRK10642 235 -D----GPKVSFKEIATK---HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSH-NLHYSE----------DH----GVLI 291 (490)
T ss_pred -c----cccCCHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCH----------HH----HHHH
Confidence 0 012235555542 12233322333344455677777788888754 233211 11 1223
Q ss_pred HHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhcc
Q 012185 295 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGF 374 (469)
Q Consensus 295 l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi 374 (469)
.....+...+.+.+.+++.||+|||+.+..+.+++.++......... . + +....++...+.|+
T Consensus 292 ~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~-~-~---------------~~~~~~~~~~~~g~ 354 (490)
T PRK10642 292 IIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILIN-S-N---------------VIGLIFAGLLMLAV 354 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHh-C-C---------------CHHHHHHHHHHHHH
Confidence 34445556677778899999999999888776544332222111110 0 0 12222233333444
Q ss_pred chhhhccccchhhhccccCCCCCccchhhH-HHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcc
Q 012185 375 PLAITYSVPFAITAELTADSGGGQGLAIGV-LNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKL 453 (469)
Q Consensus 375 ~~a~~~~vP~aLise~~p~~~~~~G~~~gi-~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~v 453 (469)
..+....+-.+++.|+.|.+ .+|+.+|+ .|+.... ..+.+.+.+.+.+..+.. ...+.+..+.++++.+ ..+++
T Consensus 355 ~~~~~~g~~~~~~~~~~p~~--~Rg~~~g~~~~~~~~~-g~~~p~i~g~l~~~~~~~-~~~~~~~~~~~~i~~~-~~~~~ 429 (490)
T PRK10642 355 ILNCFTGVMASTLPAMFPTH--IRYSALAAAFNISVLV-AGLTPTLAAWLVESTQNL-MMPAYYLMVVAVIGLI-TGVTM 429 (490)
T ss_pred HHHHHHHHHHHHHHHHCCCc--cchHHHHHHHHHHHHH-HHHHHHHHHHHHHHhCCc-hHHHHHHHHHHHHHHH-HHHHh
Confidence 44333333345778899987 56766886 5665544 566676777666544422 2334445556666665 45567
Q ss_pred cCCCCCCcc
Q 012185 454 PHLSSNSFR 462 (469)
Q Consensus 454 pet~g~~~~ 462 (469)
|||+++..+
T Consensus 430 pes~~~~~~ 438 (490)
T PRK10642 430 KETANRPLK 438 (490)
T ss_pred ccccCCCCC
Confidence 999988765
No 17
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.64 E-value=3e-14 Score=147.85 Aligned_cols=317 Identities=15% Similarity=0.157 Sum_probs=217.3
Q ss_pred HHHHHHHHHhhcchhhHhhhcCCCcccccccCCCccchhhH-------------------------HHHHHHHHhccccc
Q 012185 8 KTAIYSCRMSDDFCCYIGYILGDTKEHCSKFRGTRTRAAFV-------------------------FVIGFWLLDLANNT 62 (469)
Q Consensus 8 ~~~~~i~llll~~~~~i~~~l~d~~~~~~~~~~~~~~~i~~-------------------------~v~g~~llD~a~n~ 62 (469)
+.+..++-+.-++.+.+-..+.|++. +|+++.|||..+. +.+-..+++++...
T Consensus 51 G~iflv~RiiDAi~DP~~G~i~D~t~--~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~ 128 (467)
T COG2211 51 GTIFLVARIIDAITDPIMGFIVDRTR--SRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTL 128 (467)
T ss_pred HHHHHHHHHHHHHhcchheeeecccc--cccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHh
Confidence 44556677777888888888889775 9999999997652 22334456677778
Q ss_pred cchhHHHHHhcCCC-ccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHHh
Q 012185 63 VQGPARALLADLSG-PDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCA 141 (469)
Q Consensus 63 ~~~p~rAli~D~~p-~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~~ 141 (469)
+..|.-|+.+++.+ |+||.+.++|.+.+.++|+.+...+-.. ..+.+ +++ .....++..-.+-.++.++.+
T Consensus 129 vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~p--lv~~~---g~~---~~~~g~~~~~~~~~vi~~i~~ 200 (467)
T COG2211 129 VNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPP--LVKLF---GGG---DKALGYQGTALVLGVIGVILL 200 (467)
T ss_pred eeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHh---CCC---cchhhHHHHHHHHHHHHHHHH
Confidence 88999999999997 6999999999999999998876544322 11111 111 002245555556666666677
Q ss_pred hheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCCCCCC
Q 012185 142 LVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDG 221 (469)
Q Consensus 142 ~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (469)
+++...++|++.+..+.++ +
T Consensus 201 l~~~~~v~ER~~~~~~~~~------------------------------------------------------------~ 220 (467)
T COG2211 201 LFCFFNVKERVVETQPTKT------------------------------------------------------------G 220 (467)
T ss_pred HHHHHHhhcccCccccCcc------------------------------------------------------------c
Confidence 7777789998763221110 0
Q ss_pred ccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHH
Q 012185 222 PGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVV 301 (469)
Q Consensus 222 ~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv 301 (469)
.+..+++.+..+++ -|+++.+|+..++.|.+.+-..-...+|+.. +- +++ + ....+.+......
T Consensus 221 ~~~~~~~~~~~~~~-Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y-~l-g~~-----------~--l~~~~~~~~~~~~ 284 (467)
T COG2211 221 VKLKLKDSFLLIFK-NRPLLLLLLMNLLLFIAFNIRGSIMVYYVTY-VL-GDP-----------E--LFAYLLLLASGAG 284 (467)
T ss_pred ccccHHHHHHHHHc-cchHHHHHHHHHHHHHHHHHHhhhhheeEEE-Ec-CCh-----------H--HHHHHHHHHHHHH
Confidence 12233433333322 2567888888888888876544333333321 11 221 1 1223455555666
Q ss_pred HHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhcc
Q 012185 302 LGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYS 381 (469)
Q Consensus 302 ~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~ 381 (469)
.+++....+++.+|+|+|++|.++.++.+++.++..+... + +....++...+.+++.+..+.
T Consensus 285 ~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~---~---------------~~~l~~~~~~i~~~g~~~~~~ 346 (467)
T COG2211 285 LLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPA---G---------------SVVLIVVALIIAGVGTGIANP 346 (467)
T ss_pred HHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcC---c---------------chHHHHHHHHHHHHHhhcccc
Confidence 6777889999999999999999999888887776666541 1 356666776778999999999
Q ss_pred ccchhhhccccC-----CCCCccchhhHHHHHHHHHHHHHhhccccceeccc
Q 012185 382 VPFAITAELTAD-----SGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFG 428 (469)
Q Consensus 382 vP~aLise~~p~-----~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g 428 (469)
+||++++|...- ..|..|+..|+.+.+.=+.+.+...+.|.++...|
T Consensus 347 l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 347 LPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred ccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999988752 25789999999999999999999988888776665
No 18
>PRK09952 shikimate transporter; Provisional
Probab=99.64 E-value=1.1e-14 Score=152.63 Aligned_cols=303 Identities=14% Similarity=0.042 Sum_probs=175.1
Q ss_pred HHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHH
Q 012185 54 WLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVA 133 (469)
Q Consensus 54 ~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~ 133 (469)
.+..++.........+++.|..|+++|++..+..+....+|.+++..+.... ...+ .... ...-.||.+|.++
T Consensus 133 ~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l--~~~~---~~~~--~~~~gWr~~f~~~ 205 (438)
T PRK09952 133 AIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLI--SMMT---TDEQ--FLSWGWRIPFLFS 205 (438)
T ss_pred HHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHH--HHhC---CHHH--hhccChHHHHHHH
Confidence 3456666666677789999999999999999999888888888876544321 0010 0000 0012699999998
Q ss_pred HHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccc
Q 012185 134 VVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAED 213 (469)
Q Consensus 134 ~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (469)
.++.++... .-...||+|.+..++++. .+
T Consensus 206 ~~~~l~~~~-l~~~~~es~~~~~~~~~~-------------------------------------------------~~- 234 (438)
T PRK09952 206 IVLVLIALW-VRNGMEESAEFEQQQHEQ-------------------------------------------------AA- 234 (438)
T ss_pred HHHHHHHHH-HHHhCCCChhHHHHHhhc-------------------------------------------------cc-
Confidence 887654332 223455654322111000 00
Q ss_pred cCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHH
Q 012185 214 TNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAF 293 (469)
Q Consensus 214 ~~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~ 293 (469)
+ +......+.+ ++-|+..+.+....++.+.+.+.+..|.+.|+.++ ++-++ +. .. .
T Consensus 235 --~---~~~~~~~~~l----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~-~g~s~----------~~---~~-~ 290 (438)
T PRK09952 235 --A---KKRIPVIEAL----LRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQN-LGLPR----------EL---FL-N 290 (438)
T ss_pred --c---cccCCHHHHH----HHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCH----------HH---HH-H
Confidence 0 0001111112 22345444444455556667777777777777552 33221 01 11 1
Q ss_pred HHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhc
Q 012185 294 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLG 373 (469)
Q Consensus 294 ~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 373 (469)
...+.+++..+...+.+++.||+|||+++..+.++.++++........ . . + ..+..++...+.|
T Consensus 291 ~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~-~-~------------~--~~~~~~~~~~l~~ 354 (438)
T PRK09952 291 IGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALE-A-Q------------S--IFWIVFFSIMLAN 354 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH-c-C------------C--hHHHHHHHHHHHH
Confidence 112334566777778899999999999988776655443322222110 0 0 0 1223333344456
Q ss_pred cchhhhccccchhhhccccCCCCCccchhhHH-HHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhc
Q 012185 374 FPLAITYSVPFAITAELTADSGGGQGLAIGVL-NLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLK 452 (469)
Q Consensus 374 i~~a~~~~vP~aLise~~p~~~~~~G~~~gi~-n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~ 452 (469)
++.+....+-+++++|..|.+. +++..|+. +....+...+.+.+.+.+++..+++....+...+++++++++. .+.
T Consensus 355 ~~~~~~~~~~~~~~~e~~p~~~--r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~-~~~ 431 (438)
T PRK09952 355 IAHDMVVCVQQPMFTEMFGASY--RYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMT-ALL 431 (438)
T ss_pred HHHHHHHHHHHHHHHHHCCcch--hHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHH-HHH
Confidence 6666666666789999999864 44446663 4555678888888888887755443345677788888888874 456
Q ss_pred ccCCC
Q 012185 453 LPHLS 457 (469)
Q Consensus 453 vpet~ 457 (469)
+|||+
T Consensus 432 ~~~~~ 436 (438)
T PRK09952 432 MKDNQ 436 (438)
T ss_pred ccccc
Confidence 68765
No 19
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.63 E-value=2.4e-14 Score=148.71 Aligned_cols=286 Identities=14% Similarity=0.108 Sum_probs=180.6
Q ss_pred cccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHH
Q 012185 59 ANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLT 138 (469)
Q Consensus 59 a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~ 138 (469)
+......+..+++.|.+|+++|++++++.+...++|..+|..+++.. .. ...+++.|.+.++..+
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l-----~~----------~~~~~~~~~~~~~~~~ 187 (417)
T PRK10489 123 FGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLL-----IA----------AGGVAWNYGLAAAGTF 187 (417)
T ss_pred HHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHH-----HH----------HHhhHHHHHHHHHHHH
Confidence 33344556788999999999999999999999999999999888642 11 0145677777766665
Q ss_pred HHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCCC
Q 012185 139 LCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSF 218 (469)
Q Consensus 139 i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (469)
++.+. ++.+||.+.+..++++
T Consensus 188 ~~~~~-~~~l~~~~~~~~~~~~---------------------------------------------------------- 208 (417)
T PRK10489 188 ITLLP-LLRLPALPPPPQPREH---------------------------------------------------------- 208 (417)
T ss_pred HHHHH-HHhCCCCCCCCccccc----------------------------------------------------------
Confidence 55443 4456664321100000
Q ss_pred CCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHH
Q 012185 219 NDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLN 298 (469)
Q Consensus 219 ~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~ 298 (469)
.....++-++.+++-| .++.+.+..++ +.....+..+.+.|+.+ .++.++. ..| +.+..+
T Consensus 209 ---~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~p~~~~~-~~g~~~~-------------~~g-~~~~~~ 268 (417)
T PRK10489 209 ---PLRSLLAGFRFLLASP-VVGGIALLGGL-LTMASAVRVLYPALADE-VWQMGAA-------------QIG-LLYAAV 268 (417)
T ss_pred ---chHHHHHHHHHHHcCh-HHHHHHHHHHH-HHHHHhHHHhhHHHHHh-ccCCChh-------------HhH-HHHHHH
Confidence 0001111122222222 34443333332 22233445556666654 3443210 122 334456
Q ss_pred HHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhh
Q 012185 299 SVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAI 378 (469)
Q Consensus 299 ~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~ 378 (469)
++...+.+++.+++.||.++++....+.++.++++....+.. +.....+...+.|++.+.
T Consensus 269 ~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~g~~~~~ 328 (417)
T PRK10489 269 PLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMP--------------------MWILAVLCLALFGYLSAI 328 (417)
T ss_pred HHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccc--------------------hHHHHHHHHHHHHHHHHH
Confidence 667778888889999987777777777766666554332221 233445556667777776
Q ss_pred hccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccCCCC
Q 012185 379 TYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSS 458 (469)
Q Consensus 379 ~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpet~g 458 (469)
...+.++++.|..|++ .+|..+|+.+....+++.+.+.+.|.+.+..|.. ..+...+++.++.++.+...+||+|+
T Consensus 329 ~~~~~~~~~~~~~p~~--~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (417)
T PRK10489 329 SSLLQYTLLQTQTPDE--MLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPV--ASASASGFGLLIIGVLLLLVLGELRR 404 (417)
T ss_pred HHHHHHHHHHhhCCHH--HHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchh--hHHHHHHHHHHHHHHHHHHhcccccc
Confidence 6666678889999875 6788899999999999999999999998877743 56666666666666668888999998
Q ss_pred CCcc
Q 012185 459 NSFR 462 (469)
Q Consensus 459 ~~~~ 462 (469)
++-.
T Consensus 405 ~~~~ 408 (417)
T PRK10489 405 FRQT 408 (417)
T ss_pred cccc
Confidence 7654
No 20
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.62 E-value=3.6e-14 Score=144.14 Aligned_cols=272 Identities=12% Similarity=0.073 Sum_probs=168.6
Q ss_pred cccchhHHHHHhcCCCccchhhH--HHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHH
Q 012185 61 NTVQGPARALLADLSGPDQRNSA--NAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLT 138 (469)
Q Consensus 61 n~~~~p~rAli~D~~p~~qr~~a--~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~ 138 (469)
+.......+++.|..|+++|.++ +++.+...++|..+|..++... .. ...||+.|.+.+++.+
T Consensus 102 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l-----~~----------~~~~~~~f~~~~~~~~ 166 (375)
T TIGR00899 102 STANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWL-----AL----------GFGFTVMFLTAALAFV 166 (375)
T ss_pred hhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHH-----HH----------hcccHHHHHHHHHHHH
Confidence 34444567788898887777755 6777777788888888777541 10 1258889999888776
Q ss_pred HHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCCC
Q 012185 139 LCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSF 218 (469)
Q Consensus 139 i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (469)
++.++..+.+||+|.+..++.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------------------- 188 (375)
T TIGR00899 167 LCGVLVWLFLPSYPRGAPGALT---------------------------------------------------------- 188 (375)
T ss_pred HHHHHHHHhCCCcccCcccccC----------------------------------------------------------
Confidence 6666666668886532111000
Q ss_pred CCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHH
Q 012185 219 NDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLN 298 (469)
Q Consensus 219 ~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~ 298 (469)
....++.++ .+.++.+.+..++.|.+...+..+.+.|+.+ .++.++ .+. | +.....
T Consensus 189 ----~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~---------~~~----g-~~~~~~ 244 (375)
T TIGR00899 189 ----RLEVRGLLA-----SRDTRLLFVACTLMWGCNILYIINMPLLIIH-ELGLPD---------KLA----G-LMMGTA 244 (375)
T ss_pred ----cchhhhhhc-----CcchHHHHHHHHHHHHHHHHHHhhhHHHHHH-HcCCCH---------HHH----H-HHHHHH
Confidence 000111111 2345555555666666555555555555543 233321 111 2 222233
Q ss_pred HHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhh
Q 012185 299 SVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAI 378 (469)
Q Consensus 299 ~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~ 378 (469)
.+...+...+.+++.||+|||++..++.+..++++....+.. +.+..++...+.|++.+.
T Consensus 245 ~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~g~~~g~ 304 (375)
T TIGR00899 245 AGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADN--------------------SLWALLMLQLLNAIFIGI 304 (375)
T ss_pred HHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHHHH
Confidence 445556677889999999999988877665544433222221 133344455556777776
Q ss_pred hccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccC
Q 012185 379 TYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPH 455 (469)
Q Consensus 379 ~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpe 455 (469)
...+..+.+.|..|++ +|..+|+.+....+++.+.+.+.|.+.+..| ....|.+.+++.+++.+ ..++++|
T Consensus 305 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g--~~~~~~~~~~~~~~~~~-~~~~~~~ 375 (375)
T TIGR00899 305 LAGIGMLYFQDLMPGR---AGAATTLYTNTGRVGWIIAGSVGGILAERWS--YHAVYWFAIVMLIVALF-CLLLIKD 375 (375)
T ss_pred HHHHHHHHHHHhCcch---hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--chhHHHHHHHHHHHHHH-HHheecC
Confidence 6666667778887753 4688999999999999999999998877665 34678888888888887 4455554
No 21
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.62 E-value=1.8e-14 Score=145.01 Aligned_cols=265 Identities=15% Similarity=0.100 Sum_probs=172.7
Q ss_pred HHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHH
Q 012185 52 GFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFL 131 (469)
Q Consensus 52 g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~ 131 (469)
+..+..++......+..+++.|..|+++|++++++.+...++|.++|..++... .. ..+||+.|.
T Consensus 98 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l-----~~----------~~g~~~~~~ 162 (365)
T TIGR00900 98 LAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLM-----YA----------TLGIKWAIW 162 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-----HH----------HhhHHHHHH
Confidence 344456666677778899999999999999999999999999999999887652 11 125788887
Q ss_pred HHHHHHHHHhhhee-EEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhcc
Q 012185 132 VAVVFLTLCALVTI-YFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKK 210 (469)
Q Consensus 132 i~~i~~~i~~~it~-~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (469)
+.++..+++.+... +..||++.. ++++. + +..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-------------------------------------~-~~~------- 195 (365)
T TIGR00900 163 VDAVGFAISALLIVSVRIPELAAS--EIQAL-------------------------------------S-NAV------- 195 (365)
T ss_pred HHHHHHHHHHHHHHhcccccCCCc--ccccc-------------------------------------c-hhH-------
Confidence 77666554443322 222222110 00000 0 000
Q ss_pred ccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHh-hhhhhhhhceeecCCCCCCChhhhhHHHHhH
Q 012185 211 AEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFF-LFDTDWMGREVYHGDPKGNDHEVKFYDQGVR 289 (469)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~-~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~ 289 (469)
.+ +....++.+++ .+.++.+++..++.+..+.... .+.+.|..+ .++.++ .+
T Consensus 196 ~~--------~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---------~~---- 248 (365)
T TIGR00900 196 LR--------DTREGIKFVLK-----NPLLRTLLLLALLFNLVFAPAIVALFPYVQSK-YLGRGS---------TH---- 248 (365)
T ss_pred HH--------HHHhHHHHHHc-----CcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH-HhCCch---------HH----
Confidence 00 01112333332 3456666666666666665555 555655544 333221 11
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHH
Q 012185 290 EGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVF 369 (469)
Q Consensus 290 ~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (469)
.| +....+++...+.+++.+++.||++||++...+.++.++++....+.. + +.+..++..
T Consensus 249 ~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~--~~~~~~~~~ 308 (365)
T TIGR00900 249 YG-WVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTP-----------------P--NFPLFLVLW 308 (365)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhc-----------------h--hHHHHHHHH
Confidence 22 344556677788888899999999999998888777776655444332 0 144556667
Q ss_pred HHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecc
Q 012185 370 TLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALF 427 (469)
Q Consensus 370 ~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~ 427 (469)
.+.|++++.......+++.|..|++ .+|..+|+.|....+++.+.+.+.|.+.+..
T Consensus 309 ~~~g~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 309 FAIGVGYGPINVPQGTLLQRRVPAE--LLGRVFGAQFSLSHAAWPLGLILAGPLADHL 364 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 7788888888888888999999875 6799999999999999999998888776543
No 22
>PRK09669 putative symporter YagG; Provisional
Probab=99.62 E-value=4.7e-14 Score=148.01 Aligned_cols=312 Identities=13% Similarity=0.051 Sum_probs=195.7
Q ss_pred HHHHHHHHHhhcchhhHhhhcCCCcccccccCCCccchhhH----H---HH------------------HHHHHhccccc
Q 012185 8 KTAIYSCRMSDDFCCYIGYILGDTKEHCSKFRGTRTRAAFV----F---VI------------------GFWLLDLANNT 62 (469)
Q Consensus 8 ~~~~~i~llll~~~~~i~~~l~d~~~~~~~~~~~~~~~i~~----~---v~------------------g~~llD~a~n~ 62 (469)
+.+..++.+.-+.++.+...+.|+.. +|++++|||.++. + ++ ...+++.+...
T Consensus 48 g~i~~i~~i~dai~dp~~G~lsD~~~--~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~ 125 (444)
T PRK09669 48 GTMFLVVRVLDAVTDPLMGALVDRTR--TRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTA 125 (444)
T ss_pred HHHHHHHHHHHHcccceeeEeeecCC--CCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHh
Confidence 34556777778888888888889875 7788889987521 1 11 11123445567
Q ss_pred cchhHHHHHhcCC-CccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHHh
Q 012185 63 VQGPARALLADLS-GPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCA 141 (469)
Q Consensus 63 ~~~p~rAli~D~~-p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~~ 141 (469)
...|..|+.+|+. +++||.+.+++......+|+.++..+.... -..+ ..+ .....|+..+.+.+++.+++.
T Consensus 126 ~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl--~~~~---~~~---~~~~g~~~~~~i~~ii~~v~~ 197 (444)
T PRK09669 126 INVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPL--VDIL---GKG---DEQKGYFYAMMVMGLLGVVLF 197 (444)
T ss_pred hcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHh---CCC---chhhhHHHHHHHHHHHHHHHH
Confidence 7889999999998 568899999999999999988876554321 1111 100 001246666666666665666
Q ss_pred hheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCCCCCC
Q 012185 142 LVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDG 221 (469)
Q Consensus 142 ~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (469)
.++++..||++..+.+ + + .+
T Consensus 198 ~~~~~~~~e~~~~~~~--~---------------------------------------------------~-------~~ 217 (444)
T PRK09669 198 FCCFFMTKERYTPEVD--N---------------------------------------------------S-------SS 217 (444)
T ss_pred HHHhCCeEEecCCCCc--C---------------------------------------------------C-------CC
Confidence 6666677885322100 0 0 00
Q ss_pred ccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHH
Q 012185 222 PGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVV 301 (469)
Q Consensus 222 ~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv 301 (469)
....++++++ .|+++.+++..++.+.+.....-+...|+.. +.+ ++ + .+...+....+.
T Consensus 218 ~~~~~~~~~~-----n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~-~~~-~~-----------~---~~~~~~~~~~i~ 276 (444)
T PRK09669 218 VWKDLKLLLG-----NSQWRIMFIFNVVLLTAVVTRGGATLYYVNY-VLL-RP-----------D---LATLFLVTGMIA 276 (444)
T ss_pred HHHHHHHHhC-----CchHHHHHHHHHHHHHHHHHHhhhhheeeee-ecC-CH-----------H---HHHHHHHHHHHH
Confidence 1122333332 2457777777777766664333322222221 221 21 1 111222334455
Q ss_pred HHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhcc
Q 012185 302 LGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYS 381 (469)
Q Consensus 302 ~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~ 381 (469)
.++...+.+++.||+|+|+.+.++.++.+++.....+.. . + +.+..++...+.|++.+....
T Consensus 277 ~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~--~-~---------------~~~~~~~~~~i~g~~~~~~~~ 338 (444)
T PRK09669 277 GLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIP--P-S---------------NVWLIFALNILFNFIQNLTTP 338 (444)
T ss_pred HHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhC--c-c---------------hHHHHHHHHHHHHHHHHHHHH
Confidence 566667788999999999999988766654333222221 0 1 244456666778999999999
Q ss_pred ccchhhhccccCC-----CCCccchhhHHHHHHHHHHHHHhhccccceeccc
Q 012185 382 VPFAITAELTADS-----GGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFG 428 (469)
Q Consensus 382 vP~aLise~~p~~-----~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g 428 (469)
+++++++|..+.. +|..|...|+.+.+.-+++.+.+.+.|.+++..|
T Consensus 339 ~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~G 390 (444)
T PRK09669 339 LQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVD 390 (444)
T ss_pred HHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999887522 3567889999999999999999988888776655
No 23
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.59 E-value=1.3e-13 Score=144.30 Aligned_cols=304 Identities=13% Similarity=0.057 Sum_probs=169.2
Q ss_pred ccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHH
Q 012185 58 LANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFL 137 (469)
Q Consensus 58 ~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~ 137 (469)
++......+..+++.|..|+++|+++.++.+...++|.+++..++... .. ...||+.|.+.+++.
T Consensus 123 ~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l-----~~----------~~gw~~~f~~~~i~~ 187 (434)
T PRK11663 123 FFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAI-----AL----------HYGWRYGMMIAGIIA 187 (434)
T ss_pred HHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HH----------cccHHHHHHHHHHHH
Confidence 334444567789999999999999999999999999999987665431 11 125889998877665
Q ss_pred HHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCC
Q 012185 138 TLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGS 217 (469)
Q Consensus 138 ~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (469)
++..++..+.+||+|.+...+...++ +. + +.+.+ .++ +
T Consensus 188 ~~~~~~~~~~~~~~p~~~~~~~~~~~--------~~-------------------------~-~~~~~-----~~~--~- 225 (434)
T PRK11663 188 IVVGLFLCWRLRDKPQAMGLPSVGEW--------RH-------------------------D-ALELA-----QQQ--E- 225 (434)
T ss_pred HHHHHHHHHHcCCCHhhcCCCCcccc--------cc-------------------------c-ccccc-----hhc--c-
Confidence 44444444567887643211100000 00 0 00000 000 0
Q ss_pred CCCCccchHHHHHHH-hccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHH
Q 012185 218 FNDGPGAVLVNLLTS-LRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLL 296 (469)
Q Consensus 218 ~~~~~~~~~~~l~~~-~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~ 296 (469)
....++++.++. ..+ .+.++.+.+..++.......+..+.+.|+.++ ++.++ ++ .+ +.+.
T Consensus 226 ---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-~g~s~----------~~---a~-~~~~ 286 (434)
T PRK11663 226 ---GAGLSRKEILTKYVLL-NPYIWLLSFSYVLVYVVRAAINDWGNLYMSET-LGVDL----------VT---AN-SAVS 286 (434)
T ss_pred ---ccCCChhhhHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCCH----------HH---HH-HHHH
Confidence 001122333321 111 23455555555555555566666777777542 33321 11 11 3444
Q ss_pred HHHHHHHHHHHhHHHhhhhc--Cc-hHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhc
Q 012185 297 LNSVVLGVSSFLIEPMCRWI--GS-RLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLG 373 (469)
Q Consensus 297 i~~iv~~i~s~i~~~l~~~i--g~-r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 373 (469)
++.+...+..++.+++.||+ ++ |.......+...+++........ + ......++...+|
T Consensus 287 ~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~---~---------------~~~~~~~~~~~~g 348 (434)
T PRK11663 287 MFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPF---A---------------SYVMQAACFFTIG 348 (434)
T ss_pred HHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHccc---c---------------cHHHHHHHHHHHH
Confidence 56677788899999999998 33 33222222221111111111110 0 0111112222233
Q ss_pred cchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcc
Q 012185 374 FPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKL 453 (469)
Q Consensus 374 i~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~v 453 (469)
+.......+....++|+.|++ .+|+.+|+.|.+..+.+.+.+...|.+.+..| ...+|.+.+++++++++.+....
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g--~~~~f~~~~~~~~~~~~~~~~~~ 424 (434)
T PRK11663 349 FFVFGPQMLIGMAAAECSHKE--AAGAATGFVGLFAYLGAALSGYPLAKVLEIWH--WTGFFVVISIAAGISALLLLPFL 424 (434)
T ss_pred HHHhhHHHHHHHHHHhcccHh--hHHhHHHHHHHHHHHHHHHhcccHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHHH
Confidence 221111111223567877765 67999999999999999999999999888776 34678888888888887565566
Q ss_pred cCCCCC
Q 012185 454 PHLSSN 459 (469)
Q Consensus 454 pet~g~ 459 (469)
++.+++
T Consensus 425 ~~~~~~ 430 (434)
T PRK11663 425 NAQAPR 430 (434)
T ss_pred hhhchh
Confidence 666654
No 24
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.58 E-value=2.1e-13 Score=144.19 Aligned_cols=346 Identities=12% Similarity=0.053 Sum_probs=231.0
Q ss_pred HHHHHHhhcchhhHhhhcCCCcccccccCCCccchhhH---------------------HHHHHHHHhccccccchhHHH
Q 012185 11 IYSCRMSDDFCCYIGYILGDTKEHCSKFRGTRTRAAFV---------------------FVIGFWLLDLANNTVQGPARA 69 (469)
Q Consensus 11 ~~i~llll~~~~~i~~~l~d~~~~~~~~~~~~~~~i~~---------------------~v~g~~llD~a~n~~~~p~rA 69 (469)
..++.++.+....+-..+.|.. +++|++.+++ ..+-+++-+++.+..+....|
T Consensus 76 ~sis~l~~all~P~lGa~aD~~------~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 76 NSISGLLQALLAPFLGAIADYG------GRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHccc------ccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555555555555556754 3455554432 223344456778889999999
Q ss_pred HHhcCCCccch--------------------------hhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhccc
Q 012185 70 LLADLSGPDQR--------------------------NSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAAC 123 (469)
Q Consensus 70 li~D~~p~~qr--------------------------~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~ 123 (469)
|++|+++++.+ ++.+++.-.+..+|+++..+++... +-..... ..-.
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~-----~~~~~~~--~~~~ 222 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLL-----VISPGST--ASNT 222 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHH-----HHcCCCc--cccc
Confidence 99999999988 8888888888888888877766431 0000000 0012
Q ss_pred chhHHHHHHHHHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchh
Q 012185 124 GNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDAN 203 (469)
Q Consensus 124 ~~~~~~f~i~~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (469)
...|..+.++++-.++..+++.+.+||+|..+..+..
T Consensus 223 ~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~------------------------------------------- 259 (477)
T PF11700_consen 223 WAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSG------------------------------------------- 259 (477)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcc-------------------------------------------
Confidence 3578999999999888888999999998753211100
Q ss_pred hhhhhccccccCCCCCCCccchHHHHH---HHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChh
Q 012185 204 LKHISKKAEDTNGSFNDGPGAVLVNLL---TSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHE 280 (469)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~ 280 (469)
+ ......+++++ +.+++.| .+.+.++..|+---|..++......|..++ ++-++
T Consensus 260 --------~-------~~~~~g~~~l~~t~k~~~~~~-~~~~fLia~~l~~dg~~ti~~~~~i~a~~~-lg~s~------ 316 (477)
T PF11700_consen 260 --------S-------SYLRFGFKRLWRTFKEIRKLR-QLFLFLIAYFLYSDGVNTIISFAGIYATEV-LGMST------ 316 (477)
T ss_pred --------h-------hHHHHHHHHHHHHHHHHHhCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcCH------
Confidence 0 00223455554 4444443 455566666666669999999998887763 34321
Q ss_pred hhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCch--HHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCc
Q 012185 281 VKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSR--LVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGAN 358 (469)
Q Consensus 281 ~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r--~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (469)
.+ .. ...++..+++.+.+++.+++.||+|.| ++..++.+...+.. ..+++.... + .. .
T Consensus 317 ----~~---l~-~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~-~~g~~G~~~-~----~~------g 376 (477)
T PF11700_consen 317 ----TQ---LI-VFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIP-LYGLFGFWP-S----FF------G 376 (477)
T ss_pred ----HH---HH-HHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHH-HHHHHHhhh-c----cc------C
Confidence 11 22 222345578888999999999999999 77777665553221 122221100 0 00 0
Q ss_pred hhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHH
Q 012185 359 QAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLA 438 (469)
Q Consensus 359 ~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~ 438 (469)
..+.+..+++..+.|+..|...+..-++.+|..|+. ..+.++|+++++--..-++-+++.|.+.+..|+. +..+..-
T Consensus 377 ~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g--~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~-r~g~~~l 453 (477)
T PF11700_consen 377 LKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPG--REAEFFGLYAITGKASSWLGPLLFGLITDATGSQ-RYGFLFL 453 (477)
T ss_pred cccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCc--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-hhHHHHH
Confidence 113566778888899999999999999999999986 5699999999999999999999999999888754 4556666
Q ss_pred HHHHHHHHHHhhhcccCCCCC
Q 012185 439 SLSALAGGVVATLKLPHLSSN 459 (469)
Q Consensus 439 ~v~~liaai~~~~~vpet~g~ 459 (469)
.++.+++.+ +..+|++.||+
T Consensus 454 ~~lf~~gl~-ll~~v~~~~g~ 473 (477)
T PF11700_consen 454 LVLFLIGLI-LLFFVDVEKGR 473 (477)
T ss_pred HHHHHHHHH-HHhhccchhhh
Confidence 666676776 66889999886
No 25
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.57 E-value=3.1e-13 Score=139.12 Aligned_cols=277 Identities=16% Similarity=0.113 Sum_probs=169.3
Q ss_pred ccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHHh
Q 012185 62 TVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCA 141 (469)
Q Consensus 62 ~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~~ 141 (469)
....+..+++.|..|+++|++++++......+|..+|..++... .. ..+||..|.+.++..+++.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l-----~~----------~~~~~~~~~~~~~~~~~~~ 186 (408)
T PRK09874 122 GFVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLL-----AD----------SYGLRPVFFITASVLFLCF 186 (408)
T ss_pred hhHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHH-----HH----------HhCHHHHHHHHHHHHHHHH
Confidence 34566788999999999999999999999999999988777541 11 1247788888777766666
Q ss_pred hheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCCCCCC
Q 012185 142 LVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDG 221 (469)
Q Consensus 142 ~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (469)
++..+.+||++.+..++ +
T Consensus 187 ~~~~~~~~~~~~~~~~~-~------------------------------------------------------------- 204 (408)
T PRK09874 187 LVTLFCIRENFQPVSKK-E------------------------------------------------------------- 204 (408)
T ss_pred HHHHHHhccCcccccch-h-------------------------------------------------------------
Confidence 65556677754211100 0
Q ss_pred ccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHH
Q 012185 222 PGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVV 301 (469)
Q Consensus 222 ~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv 301 (469)
....++.++.++ .|+..+.++...+....+...+..+.+.|+.+ . .++.. +.+...| ....+.++.
T Consensus 205 -~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~---------~~~~~~g-~~~~~~~l~ 270 (408)
T PRK09874 205 -MLHMREVVTSLK-NPKLVLSLFVTTLIIQVATGSIAPILTLYVRE-L-AGNVS---------NIAFISG-MIASVPGVA 270 (408)
T ss_pred -hhHHHHHHHhCc-CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-hccch---------HHHHHHH-HHHHHHHHH
Confidence 001122222222 23333333333333333333333444444433 1 11110 1111112 122334555
Q ss_pred HHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhcc
Q 012185 302 LGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYS 381 (469)
Q Consensus 302 ~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~ 381 (469)
..+...+.+++.||+|||++...+.+..+++++...+.. +.+..++...+.|++.+....
T Consensus 271 ~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~g~~~~~~~~ 330 (408)
T PRK09874 271 ALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQ--------------------TPLQLGILRFLLGAADGALLP 330 (408)
T ss_pred HHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhc--------------------cHHHHHHHHHHHHhhhHhhHH
Confidence 667777789999999999998888776665544333222 133344555567777776554
Q ss_pred ccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcc
Q 012185 382 VPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKL 453 (469)
Q Consensus 382 vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~v 453 (469)
.-.+++.+..|++ .+|..+|+.+....+.+.+.+.+.|.+.+..| ....|.+.+++.++++++.++..
T Consensus 331 ~~~~~~~~~~~~~--~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g--~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 331 AVQTLLVYNSSNQ--IAGRIFSYNQSFRDIGNVTGPLMGAAISANYG--FRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred HHHHHHHHhCCcc--cceeeehHHHHHHHHHHHhhHHHHHHHHhhcc--hhHHHHHHHHHHHHHHHHHHHHH
Confidence 4444555656654 67889999999999999999999888877766 34789999998988888666543
No 26
>PRK11462 putative transporter; Provisional
Probab=99.57 E-value=4e-13 Score=141.96 Aligned_cols=308 Identities=14% Similarity=0.119 Sum_probs=190.4
Q ss_pred HHHHHHHHHhhcchhhHhhhcCCCcccccccCCCccchhhH-------------------------HHHHHHHHhccccc
Q 012185 8 KTAIYSCRMSDDFCCYIGYILGDTKEHCSKFRGTRTRAAFV-------------------------FVIGFWLLDLANNT 62 (469)
Q Consensus 8 ~~~~~i~llll~~~~~i~~~l~d~~~~~~~~~~~~~~~i~~-------------------------~v~g~~llD~a~n~ 62 (469)
+.+..++.+.-+..+.+-..+.|++. +|++++|||..+- ..+...+++.+...
T Consensus 48 g~i~~~~ri~Dai~Dp~~G~~~D~t~--~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~ 125 (460)
T PRK11462 48 GTMFLVARALDAISDPCMGLLADRTR--SRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTV 125 (460)
T ss_pred HHHHHHHHHHHHHHhhhheehhccCC--CCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 44567777888888999888889875 7889999996541 11222235667777
Q ss_pred cchhHHHHHhcCCC-ccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHHh
Q 012185 63 VQGPARALLADLSG-PDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCA 141 (469)
Q Consensus 63 ~~~p~rAli~D~~p-~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~~ 141 (469)
...|..|+.+|+++ ++||.+..++.+....+|..++.++.... ....+++ .....++....+.+++.+++.
T Consensus 126 ~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~pl-----v~~~g~~---~~~~g~~~~~~i~~ii~~i~~ 197 (460)
T PRK11462 126 VNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPL-----VNLIGGD---NKPLGFQGGIAVLSVVAFMML 197 (460)
T ss_pred HhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHhCCC---chhhhHHHHHHHHHHHHHHHH
Confidence 88899999999998 69999999999999888887776554321 1111110 001235556666666666677
Q ss_pred hheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCCCCCC
Q 012185 142 LVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDG 221 (469)
Q Consensus 142 ~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (469)
.+.....||++..+.+
T Consensus 198 ~i~~~~~kE~~~~~~~---------------------------------------------------------------- 213 (460)
T PRK11462 198 AFCFFTTKERVEAPPT---------------------------------------------------------------- 213 (460)
T ss_pred HHHHhcceeccCCCcc----------------------------------------------------------------
Confidence 6666667775421100
Q ss_pred ccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHH---HHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHH
Q 012185 222 PGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWF---PFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLN 298 (469)
Q Consensus 222 ~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~---~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~ 298 (469)
+.++++.++...+ .|+++.++...++.+.+.. ....|+..|+ + +++ + .....+.++
T Consensus 214 -~~~~~~~l~~~~~-Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~----~-g~~-----------~---~~~~~l~~~ 272 (460)
T PRK11462 214 -TTSMREDLRDIWQ-NDQWRIVGLLTIFNILAVCVRGGAMMYYVTWI----L-GTP-----------E---VFVAFLTTY 272 (460)
T ss_pred -CCCHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhh----c-CCh-----------H---HHHHHHHHH
Confidence 0012333333322 3566777666655555433 3333333332 2 221 1 112335566
Q ss_pred HHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhh
Q 012185 299 SVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAI 378 (469)
Q Consensus 299 ~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~ 378 (469)
.+.+++...+.+++.||+|+|+++..+..+.++......+.. + .+....++...+.|+..+.
T Consensus 273 ~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~----~--------------~~~~~~~~~~~l~g~~~~~ 334 (460)
T PRK11462 273 CVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVP----M--------------QASITMFVFIFVIGVLHQL 334 (460)
T ss_pred HHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhc----h--------------hHHHHHHHHHHHHHHHHHH
Confidence 677778888899999999999987765544433222222211 0 0122223344556777787
Q ss_pred hccccchhhhccccC-----CCCCccchhhHHHHHHHHHHHHHhhccccceeccc
Q 012185 379 TYSVPFAITAELTAD-----SGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFG 428 (469)
Q Consensus 379 ~~~vP~aLise~~p~-----~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g 428 (469)
...++++++++..+. ..|..|...+..+.+.-+++.+.+.+.|.+++..|
T Consensus 335 ~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~G 389 (460)
T PRK11462 335 VTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGG 389 (460)
T ss_pred HHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 888889999877652 24677888899888899999888888877765543
No 27
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.56 E-value=5.8e-13 Score=139.27 Aligned_cols=297 Identities=11% Similarity=0.041 Sum_probs=160.0
Q ss_pred HHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHH
Q 012185 55 LLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAV 134 (469)
Q Consensus 55 llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~ 134 (469)
+..++.........+++.|..|+++|+++.++.+.....|.+++.+++.+. ....+ +... ....||.+|.+++
T Consensus 133 l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~--~~~~~---~~~~--~~~gWr~~F~i~~ 205 (432)
T PRK10406 133 FQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVL--QQTLE---DAEL--REWGWRIPFALGA 205 (432)
T ss_pred HHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHH--HHhCC---HHHH--hccchHHHHHHHH
Confidence 344555566677889999999999999999998887778878777654321 11100 0000 0136999999988
Q ss_pred HHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhcccccc
Q 012185 135 VFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDT 214 (469)
Q Consensus 135 i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (469)
++.++...+ ....||+|.++.+ + .+
T Consensus 206 ~~~ll~~~~-~~~~~e~~~~~~~--~--------------------------------------------------~~-- 230 (432)
T PRK10406 206 VLAVVALWL-RRQLDETSQQETR--A--------------------------------------------------LK-- 230 (432)
T ss_pred HHHHHHHHH-HhcCCCCchHHHh--h--------------------------------------------------hc--
Confidence 877655432 2334554321100 0 00
Q ss_pred CCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHH-HHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHH
Q 012185 215 NGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMAL-TWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAF 293 (469)
Q Consensus 215 ~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~-~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~ 293 (469)
+..+++++++. +..+.+++..++ ...+++.+..|.++|+.+. ++-++ ++ .+ +
T Consensus 231 -------~~~~~~~l~~~-----~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~-~g~s~----------~~---~~-~ 283 (432)
T PRK10406 231 -------EAGSLKGLWRN-----RRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNT-AGMHA----------NV---AS-G 283 (432)
T ss_pred -------ccccHHHHHhh-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCH----------HH---HH-H
Confidence 11235556542 334444444443 3566777777888877552 22210 11 11 2
Q ss_pred HHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhc
Q 012185 294 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLG 373 (469)
Q Consensus 294 ~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 373 (469)
...+..+...+...+.+++.||+|||++..++.++.++++.......... + +....+.++.+.+
T Consensus 284 ~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~-~---------------~~~~~~~~~~~~~ 347 (432)
T PRK10406 284 IMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNV-S---------------SPYAAFGLVMCAL 347 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcC-C---------------cHHHHHHHHHHHH
Confidence 22333445566667789999999999987765554433322111111000 0 1111111111111
Q ss_pred cchhhhccccchhhhccccCCCCCccchhhHHHHHHHH-HHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhc
Q 012185 374 FPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVI-PQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLK 452 (469)
Q Consensus 374 i~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l-~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~ 452 (469)
+..+....+..++++|..|.+ .+|+.+|+.|....+ .....+.+.+ +++..|.. ...+.+.+++.+++.+..++
T Consensus 348 ~~~~~~~~~~~~~~~e~fp~~--~r~t~~g~~~~~g~~~~g~~~p~~~~-~l~~~g~~-~~~~~~~~~~~~i~~~~~~~- 422 (432)
T PRK10406 348 LIVSFYTSISGILKAEMFPAQ--VRALGVGLSYAVANALFGGSAEYVAL-SLKSIGME-TAFFWYVTLMAVVAFLVSLM- 422 (432)
T ss_pred HHHHHHHHHHHHHHHHHCCCC--ccchhhhHHHHHHHHHHHhHHHHHHH-HHHHhCCC-cHHHHHHHHHHHHHHHHHHH-
Confidence 222222233446889999986 567778887764332 2223444444 33444433 34566677777777764443
Q ss_pred ccCCCCCCcc
Q 012185 453 LPHLSSNSFR 462 (469)
Q Consensus 453 vpet~g~~~~ 462 (469)
.+++||+.|
T Consensus 423 -l~~~~~~~~ 431 (432)
T PRK10406 423 -LHRKGKGMR 431 (432)
T ss_pred -hhhcccccC
Confidence 567788765
No 28
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.56 E-value=1.2e-13 Score=140.37 Aligned_cols=274 Identities=14% Similarity=0.053 Sum_probs=166.8
Q ss_pred HHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHH
Q 012185 52 GFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFL 131 (469)
Q Consensus 52 g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~ 131 (469)
+-.+..++......+..+++.|..|+++|++..++.+....+|.+++.+++... .... .... .....||..|.
T Consensus 102 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~--~~~~---~~~~--~~~~~w~~~~~ 174 (394)
T TIGR00883 102 ARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLL--SYLL---GDDA--LLEWGWRIPFL 174 (394)
T ss_pred HHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHH--HHhc---CHHH--hhccchHHHHH
Confidence 334455666667778899999999999999999999999999999887766431 1000 0000 00136888888
Q ss_pred HHHHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccc
Q 012185 132 VAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKA 211 (469)
Q Consensus 132 i~~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (469)
+.+++.+++..+ ....||+|.++.++++
T Consensus 175 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--------------------------------------------------- 202 (394)
T TIGR00883 175 VSAVLVLIGLYL-RRNLEETPVFEKAQEK--------------------------------------------------- 202 (394)
T ss_pred HHHHHHHHHHHH-HHhcCCChhHHHHHhc---------------------------------------------------
Confidence 877776555433 2345554422111000
Q ss_pred cccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHH
Q 012185 212 EDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREG 291 (469)
Q Consensus 212 ~~~~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G 291 (469)
+ + .....+++.++. -++.++..+...++.+.+...+..|.+.|+.++ ++.++ ++ .+
T Consensus 203 ~---~----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~----------~~---~~ 258 (394)
T TIGR00883 203 H---K----KKRGPIRETLTK---HRKPFLLGLGLVIATTTTFYLITTYLPTYLTQT-LGLSA----------NS---AL 258 (394)
T ss_pred c---c----cccCCHHHHHHh---chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCh----------hH---HH
Confidence 0 0 011223444433 233466666677777777777888888877542 33221 01 11
Q ss_pred HHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHH-HHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHH
Q 012185 292 AFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACM-ATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFT 370 (469)
Q Consensus 292 ~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (469)
+...+..+...+...+.+++.||+|||+.+..+..+..++. ....... . ++ +.+..+....
T Consensus 259 -~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~--~-~~--------------~~~~~~~~~~ 320 (394)
T TIGR00883 259 -LVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALL--D-SG--------------SFTLFFFLVL 320 (394)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHh--c-CC--------------chHHHHHHHH
Confidence 23344556777788889999999999998775544433322 1111111 0 00 1333444555
Q ss_pred HhccchhhhccccchhhhccccCCCCCccchhhH-HHHHHHHHHHHHhhccccceeccc
Q 012185 371 LLGFPLAITYSVPFAITAELTADSGGGQGLAIGV-LNLAIVIPQMIVSLGAGPWDALFG 428 (469)
Q Consensus 371 ~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi-~n~~i~l~Qil~s~~~g~l~~~~g 428 (469)
+.|+..+.....-.+++.|..|++ .+|+.+|+ .+....+.+.+.+.+.|.+.+..|
T Consensus 321 ~~g~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g 377 (394)
T TIGR00883 321 GLALIGGMYTGPMGSFLPELFPTE--VRYTGASLAYNLAGAIFGGFAPYIAAALVAMTG 377 (394)
T ss_pred HHHHHHHHHhhhHHHHHHHhCCcc--ceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcC
Confidence 667777666677778999999986 45666787 566667888888888888887766
No 29
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.56 E-value=3.3e-13 Score=141.38 Aligned_cols=305 Identities=11% Similarity=0.073 Sum_probs=171.8
Q ss_pred ccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHH
Q 012185 58 LANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFL 137 (469)
Q Consensus 58 ~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~ 137 (469)
++......+..+++.|..|+++|+++.++.+...++|+.++..+... .. .. ...||..|.+.+++.
T Consensus 130 ~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~-----~~----~~-----~~~w~~~f~~~~~~~ 195 (438)
T TIGR00712 130 WFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLL-----GM----AW-----FNDWHAALYFPAICA 195 (438)
T ss_pred HHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHH-----HH----HH-----hhhhHHHHHHHHHHH
Confidence 33344556788899999999999999999999988888876544321 00 00 125888998877776
Q ss_pred HHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCC
Q 012185 138 TLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGS 217 (469)
Q Consensus 138 ~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (469)
++..++..+.+||+|.....+... .. +.+ .+++. .++ .+
T Consensus 196 ~i~~~~~~~~~~~~~~~~~~~~~~-----~~-----------~~~---------------~~~~~--------~~~-~~- 234 (438)
T TIGR00712 196 IIVALFAFAMMRDTPQSCGLPPIE-----EY-----------RND---------------YPDDY--------NEK-AE- 234 (438)
T ss_pred HHHHHHHHHhccCCHHhcCCCCch-----hc-----------ccc---------------ccccc--------ccc-cc-
Confidence 665555667788876432111000 00 000 00000 000 00
Q ss_pred CCCCccchHHHHH-HHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHH
Q 012185 218 FNDGPGAVLVNLL-TSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLL 296 (469)
Q Consensus 218 ~~~~~~~~~~~l~-~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~ 296 (469)
...+.++.+ +.+.+ .+.++.+++..++...+++.+..|.+.|+.+ .++-++ -+ .| +...
T Consensus 235 ----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~g~s~---------~~----~~-~~~~ 294 (438)
T TIGR00712 235 ----QELTAKEIFMQYVLP-NKLLWYIAIANVFVYLLRYGVLDWSPTYLKE-VKHFAL---------DK----SS-WAYF 294 (438)
T ss_pred ----cccchHHHHHHHHcc-CchHHHHHHHHHHHHHHHHHHHHhHHHHHHH-ccCCCh---------hh----HH-HHHH
Confidence 000122222 11222 3456777777777777778888899988876 333221 01 12 3445
Q ss_pred HHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccc-
Q 012185 297 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFP- 375 (469)
Q Consensus 297 i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~- 375 (469)
++++.+.+..++.+++.||+++++....+.....+..+......... . .+...........|..
T Consensus 295 ~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------------~~~~~~~~~~~~~g~~~ 359 (438)
T TIGR00712 295 LYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNP-A--------------GNPLVDMICMIVIGFLI 359 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcC-C--------------CchHHHHHHHHHHHHHH
Confidence 56777888889999999999654322233322222211111111100 0 0112122222233332
Q ss_pred hhhhccccchhhhccccCCCCCccchhhHHHHHHHHH-HHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhccc
Q 012185 376 LAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIP-QMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLP 454 (469)
Q Consensus 376 ~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~-Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vp 454 (469)
++.... ...++.|..|.+ .+|+.+|+.|...++. +++.+...|.+.+..|. ..+|.+..++.+++.+....++|
T Consensus 360 ~~~~~~-~~~~~~~~~~~~--~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~ 434 (438)
T TIGR00712 360 YGPVML-IGLHALELAPKK--AAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGW--DGGFMVMIGGSILAVILLIVVMI 434 (438)
T ss_pred ccHHHH-HHHHHHHhcChh--heeeehhhhchHHHhhhhhhcchhHHHHHHhccc--hHHHHHHHHHHHHHHHHHHHHHh
Confidence 121111 123567888865 6788899999887775 56777888888877663 35677777777778887888899
Q ss_pred CCC
Q 012185 455 HLS 457 (469)
Q Consensus 455 et~ 457 (469)
|.|
T Consensus 435 ~~~ 437 (438)
T TIGR00712 435 GEK 437 (438)
T ss_pred hcc
Confidence 877
No 30
>PRK03545 putative arabinose transporter; Provisional
Probab=99.56 E-value=4.5e-13 Score=137.91 Aligned_cols=267 Identities=15% Similarity=0.100 Sum_probs=165.3
Q ss_pred cchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHHhh
Q 012185 63 VQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCAL 142 (469)
Q Consensus 63 ~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~~~ 142 (469)
...+..+++.|..|+|+|+++.++.+...++|..+|..++... .+ ...||+.|.+.+++.++...
T Consensus 114 ~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l--~~-------------~~gw~~~f~~~~~~~~l~~~ 178 (390)
T PRK03545 114 FWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVI--GQ-------------YLGWRTTFLAIGGGALITLL 178 (390)
T ss_pred HHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHH--HH-------------HhcHHHHHHHHHHHHHHHHH
Confidence 3456789999999999999999999999999999988777541 11 12588888888776655554
Q ss_pred heeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCCCCCCc
Q 012185 143 VTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGP 222 (469)
Q Consensus 143 it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (469)
+.....||+|. ++ + + .
T Consensus 179 ~~~~~~~~~~~---~~-~-------------------------------------------------------~-----~ 194 (390)
T PRK03545 179 LLIKLLPLLPS---EH-S-------------------------------------------------------G-----S 194 (390)
T ss_pred HHHHhCCCCCC---CC-c-------------------------------------------------------c-----h
Confidence 44444555321 00 0 0 0
Q ss_pred cchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHH
Q 012185 223 GAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVL 302 (469)
Q Consensus 223 ~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~ 302 (469)
...+++++++ +.++.++...++...+.+....|.+.|..+ .++.++ ....+.+.+.++..
T Consensus 195 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~s~--------------~~~~~~~~~~~~~~ 254 (390)
T PRK03545 195 LKSLPLLFRR-----PALVSLYLLTVVVVTAHFTAYSYIEPFVQQ-VAGLSE--------------NFATLLLLLFGGAG 254 (390)
T ss_pred HHHHHHHHhC-----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCc--------------cHHHHHHHHHHHHH
Confidence 1122333332 344544554454444444444555666544 233221 11123445566778
Q ss_pred HHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccc
Q 012185 303 GVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSV 382 (469)
Q Consensus 303 ~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~v 382 (469)
.+.+++.+++.||+++|++. .+..+.++++....... + +.+...+...+.|++.+.....
T Consensus 255 ~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~----~---------------~~~~~~~~~~l~g~~~~~~~~~ 314 (390)
T PRK03545 255 IIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAA----N---------------SEWHLSVLSIFWGIAIMCIGLA 314 (390)
T ss_pred HHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHh----c---------------hHHHHHHHHHHHHHHHhcchHH
Confidence 88899999999999988754 44444444332222111 1 1334444555566665544333
Q ss_pred cchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcc
Q 012185 383 PFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKL 453 (469)
Q Consensus 383 P~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~v 453 (469)
..+.+.+..|+ .+|..+|+.+....+.+.+.+...|.+.+..|. ..+|.+.++..+++.+++.+..
T Consensus 315 ~~~~~~~~~~~---~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~--~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 315 MQVKVLKLAPD---ATDVAMALFSGIFNIGIGAGALLGNQVSLHLGL--SSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred HHHHHHHhCCC---cHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCh--hHHHHHHHHHHHHHHHHHHHHc
Confidence 34555666553 467889999999999999999999998887764 3678888888888888666544
No 31
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.55 E-value=7.1e-13 Score=134.98 Aligned_cols=258 Identities=12% Similarity=0.081 Sum_probs=162.6
Q ss_pred HHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHH
Q 012185 52 GFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFL 131 (469)
Q Consensus 52 g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~ 131 (469)
+..+..++......+..+++.|..|+++|++++++.+....+|..+|..++... .. ...||..|.
T Consensus 99 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l-----~~----------~~~~~~~~~ 163 (385)
T TIGR00710 99 LRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYI-----LV----------WLSWHAIFA 163 (385)
T ss_pred HHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HH----------HcCHHHHHH
Confidence 444556667777788999999999999999999999999999999998777641 11 015788888
Q ss_pred HHHHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccc
Q 012185 132 VAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKA 211 (469)
Q Consensus 132 i~~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (469)
+.++..+++.++..+..||++..+.++ + .
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------------------------------------------------~ 192 (385)
T TIGR00710 164 FLSLAGILLSALIFFILPETLPYEARI-Q--------------------------------------------------I 192 (385)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCcccC-C--------------------------------------------------H
Confidence 777666666555555566653211100 0 0
Q ss_pred cccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHH
Q 012185 212 EDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREG 291 (469)
Q Consensus 212 ~~~~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G 291 (469)
+ .....++++++ .+.++...+...+.+.+++.+..+.+.++.+ .++.++ + ..|
T Consensus 193 ~--------~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~----------~---~~g 245 (385)
T TIGR00710 193 S--------TYFETFLLLLK-----SKMFWGYALIYGASFGGFFAFFSGAPFVYID-IMGVSP----------S---VFG 245 (385)
T ss_pred H--------HHHHHHHHHHc-----CchhHHHHHHHHHHHHHHHHHHHcChHHHHH-HcCCCH----------H---HHH
Confidence 0 00112233222 1345555566666777777777777776643 233221 0 122
Q ss_pred HHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHH
Q 012185 292 AFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTL 371 (469)
Q Consensus 292 ~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (469)
+....+++...+.+++.+++.||+|+|+....+..+++++.....+..... . ......+....+
T Consensus 246 -~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------------~~~~~~~~~~~~ 309 (385)
T TIGR00710 246 -LLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAILG-L--------------GSWAMIIGPMMF 309 (385)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhc-c--------------chHHHHHHHHHH
Confidence 233445677788889999999999999998888777776655444332100 0 013334455666
Q ss_pred hccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccc
Q 012185 372 LGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAG 421 (469)
Q Consensus 372 ~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g 421 (469)
.|++++.......+...|..|+ .+|+.+++.|...+..-.+.+...+
T Consensus 310 ~g~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 310 VGIGNSMISSIAMAYALEDFPH---VAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred HHHHHHHHHHHHHHHHhccCcc---cchHHHHHHHHHHHHHHHHHHHHHH
Confidence 7888887777777777777764 4788899998776653333333344
No 32
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.54 E-value=4.7e-13 Score=133.42 Aligned_cols=257 Identities=20% Similarity=0.247 Sum_probs=195.7
Q ss_pred HHHHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHH
Q 012185 50 VIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAA 129 (469)
Q Consensus 50 v~g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
.++..+..++.+..+.+..+++.|..|+|+|++++++.+...++|..+|..++... .. ..++|..
T Consensus 91 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----~~----------~~~~~~~ 155 (352)
T cd06174 91 LVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLL-----AE----------SLGWRWL 155 (352)
T ss_pred HHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHH-----HH----------HhhHHHH
Confidence 34455667888888999999999999999999999999999999999998877642 10 1247888
Q ss_pred HHHHHHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhc
Q 012185 130 FLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISK 209 (469)
Q Consensus 130 f~i~~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (469)
|.+.+++.+++.++..+ .+
T Consensus 156 ~~~~~~~~~~~~~~~~~-~~------------------------------------------------------------ 174 (352)
T cd06174 156 FLILAILGLLLALLLLF-LL------------------------------------------------------------ 174 (352)
T ss_pred HHHHHHHHHHHHHHHHH-HH------------------------------------------------------------
Confidence 88877776555443211 11
Q ss_pred cccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhH
Q 012185 210 KAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVR 289 (469)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~ 289 (469)
|.++.+++..++.+.++..+..|.+.+..+ .++.++ .+
T Consensus 175 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---------~~---- 212 (352)
T cd06174 175 ----------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQE-VLGLSA---------AE---- 212 (352)
T ss_pred ----------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCCH---------HH----
Confidence 345667777888888889999999988866 333221 11
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHhhhhcCchH-HHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHH
Q 012185 290 EGAFGLLLNSVVLGVSSFLIEPMCRWIGSRL-VWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVV 368 (469)
Q Consensus 290 ~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~-l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (469)
.| +....+++...+.+.+.+++.||+|||+ .+..+.++..+++....+.. +.+...+.
T Consensus 213 ~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------------------~~~~~~~~ 271 (352)
T cd06174 213 AG-LLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAP--------------------SLALLLVA 271 (352)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc--------------------cHHHHHHH
Confidence 12 3445566788888999999999999999 88888888887766555432 24456667
Q ss_pred HHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHH
Q 012185 369 FTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVV 448 (469)
Q Consensus 369 ~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~ 448 (469)
..+.|++.+.......+++.|..|++ .+|+.+|+.+....+.+.+.+...|.+.+..|. ...+.+.+++.+++.++
T Consensus 272 ~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~--~~~~~~~~~~~~i~~i~ 347 (352)
T cd06174 272 LLLLGFGLGFAFPALLTLASELAPPE--ARGTASGLFNTFGSLGGALGPLLAGLLLDTGGY--GGVFLILAALALLAALL 347 (352)
T ss_pred HHHHHHHHhccchhHHHHHHhhcCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCc--chHHHHHHHHHHHHHHH
Confidence 77789999988999999999999975 689999999999999999999999988876553 46788888888888774
Q ss_pred h
Q 012185 449 A 449 (469)
Q Consensus 449 ~ 449 (469)
.
T Consensus 348 ~ 348 (352)
T cd06174 348 L 348 (352)
T ss_pred h
Confidence 4
No 33
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.52 E-value=1.1e-12 Score=135.84 Aligned_cols=284 Identities=12% Similarity=0.117 Sum_probs=165.2
Q ss_pred HHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHH
Q 012185 52 GFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFL 131 (469)
Q Consensus 52 g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~ 131 (469)
+..+..++....+.+..+++.|.+|+|+|++++++.+....+|..+|..++... .. ..|++.|.
T Consensus 105 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l-----~~-----------~g~~~~f~ 168 (400)
T PRK11646 105 SCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWL-----LQ-----------YDFRLVCA 168 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HH-----------hhHHHHHH
Confidence 334445555555666789999999999999999999999999999998888752 11 15778888
Q ss_pred HHHHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccc
Q 012185 132 VAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKA 211 (469)
Q Consensus 132 i~~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (469)
+.++..+++.++.....||++. ++.+
T Consensus 169 ~~~~~~~~~~i~~~~~~~~~~~---~~~~--------------------------------------------------- 194 (400)
T PRK11646 169 TGAVLFVLAAAFNAWLLPAYKL---STVR--------------------------------------------------- 194 (400)
T ss_pred HHHHHHHHHHHHHHHhCCcccc---cccc---------------------------------------------------
Confidence 8776655554443444554210 0000
Q ss_pred cccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHH
Q 012185 212 EDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREG 291 (469)
Q Consensus 212 ~~~~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G 291 (469)
+ .....+++++++ | .++.+++..+..+........+.+.|+.+ ..+ ++ + ..|
T Consensus 195 ~--------~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~-~~-----------~--~~g 246 (400)
T PRK11646 195 T--------PVREGMTRVLRD----K-RFVTYVLTLTGYYMLAVQVMLMLPIMVND-IAG-SP-----------S--AVK 246 (400)
T ss_pred h--------hhHHHHHHHHcC----c-hHHHHHHHHHHHHHHHHHHHHhhhhhHHh-hcC-Cc-----------h--HHH
Confidence 0 011223333332 2 34444443333333333334455555544 222 21 1 122
Q ss_pred HHHHHHHHHHHHHHHHhHHHhh-hhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHH
Q 012185 292 AFGLLLNSVVLGVSSFLIEPMC-RWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFT 370 (469)
Q Consensus 292 ~~~l~i~~iv~~i~s~i~~~l~-~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (469)
+.+.+.++..........++. ||++.++....+.+++++++..+++.. +.+..++...
T Consensus 247 -~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~--------------------~~~~~~~~~~ 305 (400)
T PRK11646 247 -WMYAIEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS--------------------NLQQLFTLIC 305 (400)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh--------------------hHHHHHHHHH
Confidence 222333333443344445555 456666666677777766654443332 1222333344
Q ss_pred HhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccC--ccchHHHHHHHHHHHHHHH
Q 012185 371 LLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGG--GNIPAFVLASLSALAGGVV 448 (469)
Q Consensus 371 ~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~--~~~~~f~~~~v~~liaai~ 448 (469)
++|++.+.....-.+++.+..|++ .+|+.+|+.|....+.+.+.+...|.+.+..++ .....+...+++++++++.
T Consensus 306 l~~~g~~~~~p~~~~~~~~~~p~~--~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (400)
T PRK11646 306 LFYIGSIIAEPARETLSASLADAR--ARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLITLLA 383 (400)
T ss_pred HHHHHHHHHHccHHHHHHhcCCcc--cchhhhhHHHHHHHHHHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHH
Confidence 556666554444456788888875 678889999999999999999999998876432 1235566777777777765
Q ss_pred hhhcccCC
Q 012185 449 ATLKLPHL 456 (469)
Q Consensus 449 ~~~~vpet 456 (469)
....+++.
T Consensus 384 ~~~~~~~~ 391 (400)
T PRK11646 384 LYWQFSQK 391 (400)
T ss_pred HHHHHhhc
Confidence 54444443
No 34
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.52 E-value=3e-13 Score=136.60 Aligned_cols=286 Identities=11% Similarity=0.091 Sum_probs=164.8
Q ss_pred HHHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhh-ccccccchhhhhhcccchhhhcccchhHHH
Q 012185 51 IGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGF-SAGASGSWHRWFPFLTSRACCAACGNLKAA 129 (469)
Q Consensus 51 ~g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgy-l~g~~~~w~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
++..+..++......+..+++.|..|+++|+++.++.+....+|..++. +++... .. ...||+.
T Consensus 88 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~--~~-------------~~~~~~~ 152 (379)
T TIGR00881 88 ALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGI--AE-------------LYSWHWV 152 (379)
T ss_pred HHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHH--Hh-------------cCCchhH
Confidence 3444556677777888999999999999999999999999999998887 344321 00 1257788
Q ss_pred HHHHHHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhc
Q 012185 130 FLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISK 209 (469)
Q Consensus 130 f~i~~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (469)
|.+.+++.++..++.++..||+|.....+.. ++. ..++ . +.+.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~--~-----------------------~~~~~-------- 196 (379)
T TIGR00881 153 FIVPGIIAIIVSLICFLLLRDSPQSCGLPPA-EEM--PNEE--P-----------------------DGDAE-------- 196 (379)
T ss_pred HHHHHHHHHHHHHHHheeeCCCccccccCcc-ccC--cccc--c-----------------------ccccc--------
Confidence 8877766655556666778887643211110 000 0000 0 00000
Q ss_pred cccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhH
Q 012185 210 KAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVR 289 (469)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~ 289 (469)
.+++ + ....+...+++++ .+.++.+++..++.+.+...+..|.+.|+.+ .++.++ ++
T Consensus 197 -~~~~-~--~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~----------~~--- 253 (379)
T TIGR00881 197 -KKEE-E--LTKKQIFLQYVLL-----NKVLWYISLGYVFVYVVRTGILDWSPLYLTQ-EKGFSK----------EK--- 253 (379)
T ss_pred -cccc-c--ccchHHHHHHHHh-----cchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCH----------HH---
Confidence 0000 0 0001112233333 2456777888888888888888888888765 233221 11
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHH
Q 012185 290 EGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVF 369 (469)
Q Consensus 290 ~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (469)
.+ +...++++...+..++.+++.||..+|+.........+............. ..+.....+..
T Consensus 254 ~~-~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~ 317 (379)
T TIGR00881 254 AS-WAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNP---------------AANPLMDLICL 317 (379)
T ss_pred HH-HHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCc---------------chhHHHHHHHH
Confidence 11 344456677788888899999986433322222222221111111111100 00122333344
Q ss_pred HHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceeccc
Q 012185 370 TLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFG 428 (469)
Q Consensus 370 ~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g 428 (469)
...|+.......+...++.|..|++ .+|+..|+.|....+.+.+.+.+.|.+.+..|
T Consensus 318 ~~~g~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 374 (379)
T TIGR00881 318 FALGFLVYGPQMLIGVIASELAPKK--AAGTAAGFVGFFAYLGGILAGLPLGYLADGFG 374 (379)
T ss_pred HHHHHHHhhhhHHHHHHHHHhcCcc--hhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhc
Confidence 4455444333344456788998876 67889999999999999999988888877655
No 35
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.52 E-value=4.4e-13 Score=135.94 Aligned_cols=260 Identities=10% Similarity=0.011 Sum_probs=153.0
Q ss_pred ccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHH
Q 012185 58 LANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFL 137 (469)
Q Consensus 58 ~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~ 137 (469)
++......+..++++|..|+|+|++++++.+....+|.+++..++... ......+. .....||..|.+.++..
T Consensus 95 ~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l-----~~~~g~~~--~~~~~wr~~f~i~ai~~ 167 (356)
T TIGR00901 95 FFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVL-----ASPEFANT--GLITLWGYIFFWTALLI 167 (356)
T ss_pred HHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHH-----hhhccccc--ccccccHHHHHHHHHHH
Confidence 333444566899999999999999999999999999999887776531 11110000 00123999999999888
Q ss_pred HHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCC
Q 012185 138 TLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGS 217 (469)
Q Consensus 138 ~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (469)
++...+.++..||++..+.++ + + + .+
T Consensus 168 l~~~~~~~~~~~e~~~~~~~~-~----------------------------------------~-~-------~~----- 193 (356)
T TIGR00901 168 LPGLLVTLFLAKEPQEDASVP-K----------------------------------------P-L-------TQ----- 193 (356)
T ss_pred HHHHHHHHHhccCCCcccccc-h----------------------------------------h-H-------HH-----
Confidence 776666555567742110000 0 0 0 00
Q ss_pred CCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHH
Q 012185 218 FNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLL 297 (469)
Q Consensus 218 ~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i 297 (469)
..+..++++++. +.+ +.++.+.+..++.+.++.....+.+.|+.+ ++-++ + ..|....+.
T Consensus 194 ---~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~g~~~----------~---~~g~~~~~~ 253 (356)
T TIGR00901 194 ---AVLKPIREFFQR-KNM-IQALLLLLLIVLYKLGDSAATVLTTLFLLD--MGFSK----------E---EIALVAKIN 253 (356)
T ss_pred ---HHHHHHHHHHHh-cCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCH----------H---HHHHHhHHH
Confidence 011234444443 111 235555666666677777777777877765 33221 1 122112111
Q ss_pred HHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchh
Q 012185 298 NSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLA 377 (469)
Q Consensus 298 ~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a 377 (469)
..+...+..++.+++.||+|+|+....+.++.+++.....+.....++ ++. +++ ..+.......+.+++.+
T Consensus 254 ~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~--~~~~~~~~~~l~~~~~~ 324 (356)
T TIGR00901 254 GLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHH---DGI----TFP--HLLMLFLTITLEAVTGG 324 (356)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcc---ccc----ccc--hHHHHHHHHHHHHHHhH
Confidence 223456667888999999999988888777776655444333210000 000 000 23334445555677777
Q ss_pred hhccccchhhhccccCCCCCccchhhHHHHHH
Q 012185 378 ITYSVPFAITAELTADSGGGQGLAIGVLNLAI 409 (469)
Q Consensus 378 ~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i 409 (469)
..+..-.+++.|..|++ .+|+++|+.+...
T Consensus 325 ~~~~~~~~~~~~~~p~~--~~g~~~g~~~~~~ 354 (356)
T TIGR00901 325 LGTVAFVAFLSKLSNPK--FGATQMALLSSLS 354 (356)
T ss_pred HHHHHHHHHHHHhcCCC--ccHHHHHHHHHHH
Confidence 77777778999999986 7899999988764
No 36
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.51 E-value=8.4e-13 Score=136.41 Aligned_cols=287 Identities=8% Similarity=0.038 Sum_probs=176.0
Q ss_pred HHHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHH
Q 012185 51 IGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAF 130 (469)
Q Consensus 51 ~g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f 130 (469)
++-.+.-++.........+++.|..| ++|+++++.++....+|..+|..++... ... ..+||..+
T Consensus 102 ~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l-----~~~---------~~~w~~~~ 166 (393)
T PRK09705 102 SSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWL-----VQH---------SETWYQTL 166 (393)
T ss_pred HHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHH-----HHh---------cCCHHHHH
Confidence 34445556666667777889999886 7899999999988888888887766431 000 12466655
Q ss_pred HHHHHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhcc
Q 012185 131 LVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKK 210 (469)
Q Consensus 131 ~i~~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (469)
.+.++..++.....+...+++|..+.+ +
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-------------------------------------------------- 194 (393)
T PRK09705 167 AWWALPAVVALFAWWWQSAREVASSHK--T-------------------------------------------------- 194 (393)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCccccC--C--------------------------------------------------
Confidence 443333322222222111222210000 0
Q ss_pred ccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHH
Q 012185 211 AEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVRE 290 (469)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~ 290 (469)
+ . .. ++.++ . +..+.+++..++...+++.+..|.+.|+.| ++-++ .+ .
T Consensus 195 -~---~----~~----~~~l~----~-~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~--~g~s~---------~~----a 242 (393)
T PRK09705 195 -T---T----TP----VRVVF----T-PRAWTLGVYFGLINGGYASLIAWLPAFYIE--IGASA---------QY----S 242 (393)
T ss_pred -C---c----CC----ccccc----C-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCh---------hh----h
Confidence 0 0 00 00011 1 234455555556666788888888888865 33221 11 1
Q ss_pred HHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHH
Q 012185 291 GAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFT 370 (469)
Q Consensus 291 G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (469)
| ..+.++++...+.+++.+++.||++||+..+++..+.+++...+.... . +..... ..
T Consensus 243 g-~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~----~---------------~~~~~~--~~ 300 (393)
T PRK09705 243 G-SLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLP----L---------------QLPVLW--AM 300 (393)
T ss_pred h-HHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHcc----c---------------hHHHHH--HH
Confidence 2 334467777888899999999999999998888766665544333221 0 011111 22
Q ss_pred HhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhh
Q 012185 371 LLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVAT 450 (469)
Q Consensus 371 ~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~ 450 (469)
+.|++.+.......+...+..+++ +.+|+.+|+.+....+.+.+.+...|.+.+..|+. ...|.+.+++.+++.+..+
T Consensus 301 l~g~g~g~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~-~~~~~~~~~~~~~~~~~~~ 378 (393)
T PRK09705 301 VCGLGLGGAFPLCLLLALDHSVQP-AIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNY-LMDWAFHALCVVGLMIITL 378 (393)
T ss_pred HHHHhccchHHHHHHHHHhhcCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-hHHHHHHHHHHHHHHHHHH
Confidence 345555544444444555666432 35788999999999999999999999998888754 3668888888888888778
Q ss_pred hcccCCCCCC
Q 012185 451 LKLPHLSSNS 460 (469)
Q Consensus 451 ~~vpet~g~~ 460 (469)
.+.|||+.|-
T Consensus 379 ~~~~~~~~~~ 388 (393)
T PRK09705 379 RFAPARFPQL 388 (393)
T ss_pred Hhccccccch
Confidence 8999999874
No 37
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.51 E-value=1.2e-12 Score=139.35 Aligned_cols=281 Identities=15% Similarity=0.088 Sum_probs=164.1
Q ss_pred HhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHH
Q 012185 56 LDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVV 135 (469)
Q Consensus 56 lD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i 135 (469)
..++......+..+++.|..|+|+|++++++......+|.++|..++... .. . ...||..|.+.++
T Consensus 117 ~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l-----~~----~-----~~GWr~~f~i~a~ 182 (491)
T PRK11010 117 IAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWL-----AD----R-----YLGWQGMYWLMAA 182 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHH-----Hh----c-----ccCHHHHHHHHHH
Confidence 34555667778899999999999999999999988888888886555431 10 0 0258999998887
Q ss_pred HHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccC
Q 012185 136 FLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTN 215 (469)
Q Consensus 136 ~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (469)
..+++....+ .+||++....++++ .+
T Consensus 183 l~ll~~l~~~-~~~e~~~~~~~~~~--------------------------------------------------~~--- 208 (491)
T PRK11010 183 LLIPCIIATL-LAPEPTDTIPVPKT--------------------------------------------------LE--- 208 (491)
T ss_pred HHHHHHHHHH-hcCCCccccccccc--------------------------------------------------hh---
Confidence 7666655444 47885421100000 00
Q ss_pred CCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHH
Q 012185 216 GSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGL 295 (469)
Q Consensus 216 ~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l 295 (469)
+ .....++++++ -|+ .+.+.+..++...+......+.+.|+.+ .++-++ + ..|....
T Consensus 209 ~----~~~~~l~~~~~----~~~-~~~~ll~~~l~~~~~~~~~~~~~~~l~~-~~G~s~-----------~--~~g~~~~ 265 (491)
T PRK11010 209 Q----AVVAPLRDFFG----RNN-AWLILLLIVLYKLGDAFAMSLTTTFLIR-GVGFDA-----------G--EVGLVNK 265 (491)
T ss_pred h----hHHHHHHHHHc----CcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCH-----------H--HHHHHHH
Confidence 0 01123344432 232 3333333333334443344445555433 223221 1 1221111
Q ss_pred HHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHH----
Q 012185 296 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTL---- 371 (469)
Q Consensus 296 ~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 371 (469)
....+...+.+++.+++.||+|+|+...++.++.+++.+......... + + .+...+...+
T Consensus 266 ~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~-~------------~---~~~l~~~~~l~~~~ 329 (491)
T PRK11010 266 TLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITD-K------------N---LYSMGAAVFFENLC 329 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcc-c------------c---HHHHHHHHHHHHHH
Confidence 222345667788899999999998877765555444332222221100 0 1 1111112222
Q ss_pred hccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhh
Q 012185 372 LGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATL 451 (469)
Q Consensus 372 ~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~ 451 (469)
.|+..+.. ++++.+..+++ -.|+++|+.|....++.++.+...|.+.+..| ....|.+.+++++++.+.+.+
T Consensus 330 ~g~~~~~~----~a~~~~l~~~~--~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G--~~~~f~~~~~~~l~~l~~~~~ 401 (491)
T PRK11010 330 GGMGTAAF----VALLMTLCNKS--FSATQFALLSALSAVGRVYVGPVAGWFVEAHG--WPTFYLFSVAAAVPGLLLLLV 401 (491)
T ss_pred HHHHHHHH----HHHHHHHcCCC--CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--hHHHHHHHHHHHHHHHHHHHH
Confidence 34444443 56777788765 56889999999999999999888998888776 346788888888888775543
No 38
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.51 E-value=1.2e-12 Score=132.10 Aligned_cols=273 Identities=16% Similarity=0.107 Sum_probs=162.5
Q ss_pred ccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHH
Q 012185 58 LANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFL 137 (469)
Q Consensus 58 ~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~ 137 (469)
++......+...++.|..| |+|+++.++.....++|.+++..+... .. + ...||+.|.+.+++.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~-----~~----~------~~~~~~~f~~~~~~~ 166 (377)
T TIGR00890 103 AGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITS-----VI----N------LEGVPAAFIYMGIIF 166 (377)
T ss_pred HHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHH-----HH----h------cccHHHHHHHHHHHH
Confidence 3333344445566677665 679999999988888887764332221 10 0 125888888877776
Q ss_pred HHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCC
Q 012185 138 TLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGS 217 (469)
Q Consensus 138 ~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (469)
++...+..+.+||+|..+.++++ . .+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~------~-------------------------------------------~~----- 192 (377)
T TIGR00890 167 LLVIVLGAFLIGYPPGQLIKTNI------E-------------------------------------------VS----- 192 (377)
T ss_pred HHHHHHHHHheecCchhccccCc------c-------------------------------------------cc-----
Confidence 65555555556664421111000 0 00
Q ss_pred CCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHH
Q 012185 218 FNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLL 297 (469)
Q Consensus 218 ~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i 297 (469)
......++.++ .+.++.+.+..++..+.......+.++|..+ ++.+ + ....+...+
T Consensus 193 ---~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~------------~--~~~~~~~~~ 248 (377)
T TIGR00890 193 ---VKDYTVWEMLR-----TPQFWVLYLSFFLNAVSGLLLIGLYKPYGQS--LGLS------------D--GFLVLAVSI 248 (377)
T ss_pred ---hhhhhHHHHHc-----CccHHHHHHHHHHHhHHHHHHHHHHHHHHHH--cCCC------------H--HHHHHHHHH
Confidence 00011222222 1234444444444433333333444444322 2211 1 111134455
Q ss_pred HHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchh
Q 012185 298 NSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLA 377 (469)
Q Consensus 298 ~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a 377 (469)
+++...+.+++.+++.||+|||+...++.++.+++++...+.... .....+....+.|+.++
T Consensus 249 ~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~g~~~g 310 (377)
T TIGR00890 249 SSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPML------------------NDVLFLATVALVFFTWG 310 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccc------------------hhHHHHHHHHHHHHHhc
Confidence 667788889999999999999999888888777766544433210 12222333445666777
Q ss_pred hhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHH
Q 012185 378 ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGG 446 (469)
Q Consensus 378 ~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaa 446 (469)
....+-.++++|..|++ .+|+.+|+.+....+.+.+.+...|.+.+..| ....|.+.+++++++.
T Consensus 311 ~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g--~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 311 GTISLFPSLVSDIFGPA--NSAANYGFLYTAKAVAGIFGGLIASHALTEIG--FEYTFIVTGAFALTSL 375 (377)
T ss_pred cchhccHHHHHHHhhhh--hhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhc--hhhHHHHHHHHHHHhc
Confidence 66666567889999876 67889999999999999999999998887766 3467888777777654
No 39
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.50 E-value=1.3e-12 Score=152.43 Aligned_cols=299 Identities=14% Similarity=0.106 Sum_probs=172.5
Q ss_pred hccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHH
Q 012185 57 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVF 136 (469)
Q Consensus 57 D~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~ 136 (469)
-++......+..+++.|.+|+++|++++++.+...++|.++|.++++.. ..... ........ .+.+.+.+..+.
T Consensus 114 G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l--~~~~~---~~~~~~~~-~~~~~~~~~~~~ 187 (1146)
T PRK08633 114 GAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFL--FESVN---GNTPSEIL-GRIAPAGLVLLA 187 (1146)
T ss_pred HHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHH--HHhhc---cccccccc-cchHHHHHHHHH
Confidence 3444555566789999999999999999999999999999999988752 11100 00000001 122333333333
Q ss_pred HHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCC
Q 012185 137 LTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNG 216 (469)
Q Consensus 137 ~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (469)
..+..++..+.+||.|.......+. + +
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------------~---~ 214 (1146)
T PRK08633 188 VAVLGLIFAYRLPKVPAAAPEVFDK--------------------------------------------------K---K 214 (1146)
T ss_pred HHHHHHHHHhcCcCCCCCCcccccc--------------------------------------------------c---c
Confidence 2233333445567765432211000 0 0
Q ss_pred CCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHH
Q 012185 217 SFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLL 296 (469)
Q Consensus 217 ~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~ 296 (469)
........+-++.+++ .+.++.+.+..++.|...+.+..+.+.|+.+ .++.++ ....| +.+.
T Consensus 215 ---~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~------------~~~~g-~~~~ 276 (1146)
T PRK08633 215 ---YLFPKLLWRNLKLLRS-DRVLWLAIIGLSYFWFISQLAQANFPAYAKE-VLGLDN------------TFQVQ-YLLA 276 (1146)
T ss_pred ---cccHHHHHHHHHHHhc-CcHHHHHHHHHHHHHHHHHHHHHhhHHHHHH-HhCCCc------------HHHHH-HHHH
Confidence 0000111222222222 2345555556666666666666677766654 233221 10122 3445
Q ss_pred HHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccch
Q 012185 297 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPL 376 (469)
Q Consensus 297 i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~ 376 (469)
...+..++.+++.+++.||+++|+++.++.++++++++...+.. +.+..++.+.++|++.
T Consensus 277 ~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~g~~~ 336 (1146)
T PRK08633 277 ASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAP--------------------SLASVLVLFFLFGFSA 336 (1146)
T ss_pred HHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhh--------------------hHHHHHHHHHHHHHHH
Confidence 56677788899999999999999888888877776655444332 2444555666677777
Q ss_pred hhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccC
Q 012185 377 AITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPH 455 (469)
Q Consensus 377 a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpe 455 (469)
+.....-.+++.+..|.+ .+|..+|+.|+...+..++.+.+.+.+.. .+......|.+.+.+.++..++...++|+
T Consensus 337 ~~~~~~~~~~~~~~~p~~--~rg~~~~~~~~~~~lg~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (1146)
T PRK08633 337 GLFIVPLNALIQFRAPEK--ELGKVLAANNFLQNVGMLLFLALTTLFSG-LGLSPAGLFYLIALVTLIGTLYTLLLLPD 412 (1146)
T ss_pred HHhhHHHHHHHhhcCCcc--chhhhhHHHHHHHHHHHHHHHHHHHHHHH-hccCHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 766666677888888875 67888999999999988766655544332 22222234555555555555444444443
No 40
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.50 E-value=6.2e-12 Score=128.22 Aligned_cols=289 Identities=13% Similarity=0.058 Sum_probs=161.0
Q ss_pred HHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHH
Q 012185 52 GFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFL 131 (469)
Q Consensus 52 g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~ 131 (469)
+..+..++......+..+++.|..|+++|+++.++......+|..++..++... .+ ...||+.|.
T Consensus 85 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l--~~-------------~~~~~~~~~ 149 (377)
T PRK11102 85 MRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWL--LV-------------WFSWHAIFW 149 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH-------------HcChHHHHH
Confidence 334455666666778899999999999999999999999999999988776531 11 015788888
Q ss_pred HHHHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccc
Q 012185 132 VAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKA 211 (469)
Q Consensus 132 i~~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (469)
+.+++.++..++..+..||++..+++++. + .
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------~-------~ 180 (377)
T PRK11102 150 VLALAAILAAALVFFFIPETLPKERRQPF------------------------------------------H-------L 180 (377)
T ss_pred HHHHHHHHHHHHHHHhCCccCcccccCCC------------------------------------------C-------h
Confidence 87777666655555667775421110000 0 0
Q ss_pred cccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHH
Q 012185 212 EDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREG 291 (469)
Q Consensus 212 ~~~~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G 291 (469)
+ +....++++++ . +.++..++..++.+.+++.+..+.+.+..+ .++-++ .+ .|
T Consensus 181 ~--------~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~---------~~----~g 233 (377)
T PRK11102 181 R--------TTIRNFASLFR----H-KRVLGYMLASGFSFAGMFSFLTAGPFVYIE-LNGVSP---------QN----FG 233 (377)
T ss_pred H--------HHHHHHHHHHc----C-hHHHHHHHHHHHHHHHHHHHHHcCHHHHHH-HhCCCH---------HH----HH
Confidence 0 01112233332 2 345556667777777777777766665543 233221 11 22
Q ss_pred HHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHH
Q 012185 292 AFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTL 371 (469)
Q Consensus 292 ~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (469)
+...++.+...+.+++.+++.||+|+|+.+..+.++..++.......... + ...+...+....
T Consensus 234 -~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~--~--------------~~~~~~~~~~~~ 296 (377)
T PRK11102 234 -YYFALNIVFLFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALL--D--------------LGFWALVVGVAA 296 (377)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH--h--------------hhHHHHHHHHHH
Confidence 33445667778888999999999999999888776554432222222110 0 012222222333
Q ss_pred hccchhhhccccchhhhccccCCCCCccchhhHHHHHHH-HHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhh
Q 012185 372 LGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIV-IPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVAT 450 (469)
Q Consensus 372 ~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~-l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~ 450 (469)
.+...+.......+.+.|..|+ .+|...++.|...+ +++++.+...+... . .....+...+++.+++.++.+
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~g~~~g~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~ 369 (377)
T PRK11102 297 FVGCVSMISSNAMAVILDEFPH---MAGTASSLAGTLRFGIGAIVGALLSLAPF---T-SAWPMVWSMAFCSILSILFYL 369 (377)
T ss_pred HHHHHHHhhHHHHHHHhccccc---cchHHHHHHHHHHHHHHHHHHHHHHhccC---C-ChHHHHHHHHHHHHHHHHHHH
Confidence 3333333333333455666653 46777888776543 55554444332211 1 122334444555555555444
Q ss_pred hcccC
Q 012185 451 LKLPH 455 (469)
Q Consensus 451 ~~vpe 455 (469)
+..++
T Consensus 370 ~~~~~ 374 (377)
T PRK11102 370 YASRP 374 (377)
T ss_pred Hhccc
Confidence 44443
No 41
>TIGR00895 2A0115 benzoate transport.
Probab=99.49 E-value=4.9e-13 Score=136.16 Aligned_cols=287 Identities=13% Similarity=0.055 Sum_probs=165.7
Q ss_pred HHHHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHH
Q 012185 50 VIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAA 129 (469)
Q Consensus 50 v~g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~ 129 (469)
+++..+..++......+..+++.|..|+++|+++.++.+....+|..+|..++... .. ...|+..
T Consensus 109 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l-----~~----------~~g~~~~ 173 (398)
T TIGR00895 109 LILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWL-----IP----------VFGWRSL 173 (398)
T ss_pred HHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHH-----hh----------cccceee
Confidence 34556677788888899999999999999999999999999999999988776531 10 0135666
Q ss_pred HHHHHHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhc
Q 012185 130 FLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISK 209 (469)
Q Consensus 130 f~i~~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (469)
|.+.++..+++..+.....||++....++++ ++.++. .++..... +++ .+.+.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--------~~~~~~~~-----------~~~--~~~~~----- 226 (398)
T TIGR00895 174 FYVGGIAPLLLLLLLMRFLPESIDFLVSKRP-ETVRRI--------VNAIAPQM-----------QAE--AQSAL----- 226 (398)
T ss_pred hhhhhhHHHHHHHHHHHhCCCCChHHHhcCH-HHHHHH--------HHHHHHhc-----------ccc--ccccc-----
Confidence 7666544444455555667887643222110 000000 00000000 000 00000
Q ss_pred cccccCCCCCCCccchHHHHHHHhccC--CHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHH
Q 012185 210 KAEDTNGSFNDGPGAVLVNLLTSLRHL--PPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQG 287 (469)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~l~~~~~~m--P~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~g 287 (469)
.+ + +......++.++.+++. .+....+++..++...+++.+..|.+.+..+ ++.++ +
T Consensus 227 -~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~----------~-- 285 (398)
T TIGR00895 227 -PE---Q---KATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVE--LGFSL----------S-- 285 (398)
T ss_pred -cc---c---ccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCH----------H--
Confidence 00 0 00011122223322221 1223334455555666666666666644332 22221 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHH
Q 012185 288 VREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLV 367 (469)
Q Consensus 288 v~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (469)
..+ +...+.++...+..++.+++.||+|+|++.... .+.+++........ + +....++
T Consensus 286 -~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~---------------~~~~~~~ 343 (398)
T TIGR00895 286 -LAA-TGGALFNFGGVIGSIIFGWLADRLGPRVTALLL-LLGAVFAVLVGSTL----F---------------SPTLLLL 343 (398)
T ss_pred -HHH-HHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHH-HHHHHHHHHHHHHh----h---------------CHHHHHH
Confidence 112 334456677788899999999999999554433 33333222222211 1 1334556
Q ss_pred HHHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccc
Q 012185 368 VFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPW 423 (469)
Q Consensus 368 ~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l 423 (469)
...+.|+.++......+++++|..|++ .+|+.+|+.+....+++.+.+.+.|.+
T Consensus 344 ~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 344 LGAIAGFFVNGGQSGLYALMALFYPTA--IRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCHH--HHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 667788888888888889999999876 678889999999999998888777654
No 42
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.49 E-value=4.1e-12 Score=130.86 Aligned_cols=140 Identities=19% Similarity=0.189 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhcc
Q 012185 295 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGF 374 (469)
Q Consensus 295 l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi 374 (469)
...+.+...+..++.+++.||+|+|+....+.+++++++....+.. +.+..++...+.|+
T Consensus 255 ~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~l~G~ 314 (399)
T PRK05122 255 LTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAP--------------------SPWMALIGAALTGF 314 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc--------------------cHHHHHHHHHHHHH
Confidence 3445566677788889999999999998888877777665444332 13334455666777
Q ss_pred chhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhccc
Q 012185 375 PLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLP 454 (469)
Q Consensus 375 ~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vp 454 (469)
+.+.....-.+.+.|..|++ .+|+.+|+.|....+.+.+.+...|.+.+..| ....|.+.+++.+++.+..+ +.+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g--~~~~~~~~~~~~~~~~~~~~-~~~ 389 (399)
T PRK05122 315 GFSLVFPALGVEAVKRVPPQ--NRGAALGAYSVFLDLSLGITGPLAGLVASWFG--YPSIFLAAALAALLGLALTW-LLY 389 (399)
T ss_pred hHHHHHHHHHHHHHHhCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHHH-Hhc
Confidence 77755433334566777765 68999999999999999998888888877666 34678888888888777544 444
Q ss_pred CCCCC
Q 012185 455 HLSSN 459 (469)
Q Consensus 455 et~g~ 459 (469)
+.++|
T Consensus 390 ~~~~~ 394 (399)
T PRK05122 390 RRAPR 394 (399)
T ss_pred ccccc
Confidence 44443
No 43
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.49 E-value=3.7e-12 Score=134.02 Aligned_cols=302 Identities=12% Similarity=0.110 Sum_probs=167.3
Q ss_pred ccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhh-HHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHH
Q 012185 60 NNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGN-ILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLT 138 (469)
Q Consensus 60 ~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~-ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~ 138 (469)
......+..+.+.|..|+++|+++.++.+...++|+ +.+.+++....+ ...||+.|.+.+++.+
T Consensus 134 ~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~---------------~~gw~~~f~i~~~~~~ 198 (452)
T PRK11273 134 QGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAW---------------FNDWHAALYMPAFAAI 198 (452)
T ss_pred HhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH---------------hccHHHHHHHHHHHHH
Confidence 334445677889999999999999999988888875 455544321100 1257888888776665
Q ss_pred HHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCCC
Q 012185 139 LCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSF 218 (469)
Q Consensus 139 i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (469)
+..++..+.+||+|.....+++ .|.+ + +.+.+ .+++ +
T Consensus 199 ~~~~l~~~~~~~~~~~~~~~~~-~~~~----~--------------------------~~~~~---------~~~~-~-- 235 (452)
T PRK11273 199 LVALFAFAMMRDTPQSCGLPPI-EEYK----N--------------------------DYPDD---------YNEK-H-- 235 (452)
T ss_pred HHHHHHHHHccCCHhhcCCCCh-hhhh----h--------------------------ccccc---------cccc-c--
Confidence 5555666777887643211100 0000 0 00000 0000 0
Q ss_pred CCCccchHHHHH-HHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHH
Q 012185 219 NDGPGAVLVNLL-TSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLL 297 (469)
Q Consensus 219 ~~~~~~~~~~l~-~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i 297 (469)
....+.++.+ +.+.+ .+.++.+++..++....++.+..|.+.|+.++ ++-++ ++ .+ +...+
T Consensus 236 --~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~-~g~s~----------~~---~~-~~~~~ 297 (452)
T PRK11273 236 --EQELTAKQIFMQYVLP-NKLLWYIAIANVFVYLLRYGILDWSPTYLKEV-KHFAL----------DK---SS-WAYFL 297 (452)
T ss_pred --CCCccHHHHHHHHHHc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCH----------HH---HH-HHHHH
Confidence 0001123322 11221 35577777788777777788888999988763 22221 11 12 33445
Q ss_pred HHHHHHHHHHhHHHhhhhc--CchHHHH-HHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhcc
Q 012185 298 NSVVLGVSSFLIEPMCRWI--GSRLVWA-ISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGF 374 (469)
Q Consensus 298 ~~iv~~i~s~i~~~l~~~i--g~r~l~~-~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi 374 (469)
+++...+..++.+++.||+ +||+... ....+.+++++...+.. . .+....++...++|.
T Consensus 298 ~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~----~--------------~~~~~~~~~~~~~g~ 359 (452)
T PRK11273 298 YEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNP----A--------------GNPTVDMACMIVIGF 359 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhc----c--------------cChHHHHHHHHHHHH
Confidence 6667777888999999999 4454322 22222222222111110 0 012222222233333
Q ss_pred chhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHH-HhhccccceecccCccchHHHHHHHHHHHHHHHhh-hc
Q 012185 375 PLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMI-VSLGAGPWDALFGGGNIPAFVLASLSALAGGVVAT-LK 452 (469)
Q Consensus 375 ~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil-~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~-~~ 452 (469)
..........++..|+.|++ .+|+.+|+.|....+...+ .+...|.+.+..| ....|.+.+++++++++++. +.
T Consensus 360 ~~~~~~~~~~~~~~~~~p~~--~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g--~~~~f~~~~~~~~~~~~~~~~~~ 435 (452)
T PRK11273 360 LIYGPVMLIGLHALELAPKK--AAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG--WDGGFMVMIGGSILAVILLIVVM 435 (452)
T ss_pred HHHhHHHHHHHHHHHHcChh--hhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhc--chHHHHHHHHHHHHHHHHHHHHh
Confidence 22111111234567888875 6888899999988887765 4677788877776 33677777777787777666 44
Q ss_pred ccCCCCC
Q 012185 453 LPHLSSN 459 (469)
Q Consensus 453 vpet~g~ 459 (469)
.+|+|.+
T Consensus 436 ~~~~~~~ 442 (452)
T PRK11273 436 IGEKRHH 442 (452)
T ss_pred ccccchH
Confidence 6677654
No 44
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.49 E-value=7.8e-13 Score=135.30 Aligned_cols=286 Identities=9% Similarity=0.043 Sum_probs=156.2
Q ss_pred HHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHH
Q 012185 54 WLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVA 133 (469)
Q Consensus 54 ~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~ 133 (469)
.+.-++.........+++.|..|+++|++++++.+...++|.+++..++... ... .+..||+.|.+.
T Consensus 108 ~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l-----~~~--------~~~~w~~~f~~~ 174 (405)
T TIGR00891 108 LVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLV-----VPV--------WGDGWRALFFIS 174 (405)
T ss_pred HHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH-----HHh--------cCccHHHHHHHH
Confidence 3344555667778899999999999999999999999999999988776531 110 122589999888
Q ss_pred HHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccc
Q 012185 134 VVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAED 213 (469)
Q Consensus 134 ~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (469)
+++.++++. .....||++.++.++++.++.++.. ++.. +.+.. .+
T Consensus 175 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~------------------~~~~~-------~~- 219 (405)
T TIGR00891 175 ILPIIFALW-LRKNIPEAEDWKEKHAGKALVRTMV--------DILY------------------GGEHR-------IA- 219 (405)
T ss_pred HHHHHHHHH-HHHhCCCChhHHHHhhhhhhhhhHH--------HHHh------------------ccchh-------hh-
Confidence 777665543 3455677654322111100000000 0000 00000 00
Q ss_pred cCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHH
Q 012185 214 TNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAF 293 (469)
Q Consensus 214 ~~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~ 293 (469)
...+.......+..++.++.+..+++..++..........+.+.|+.++ ++.++ + ..| +
T Consensus 220 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~----------~---~~~-~ 278 (405)
T TIGR00891 220 ------NIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKAD-LGLSP----------H---TVA-N 278 (405)
T ss_pred ------hhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHH-hCCCH----------H---HHH-H
Confidence 0000001111111111111122223332222222334444555555432 22221 0 112 2
Q ss_pred HHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhc
Q 012185 294 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLG 373 (469)
Q Consensus 294 ~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 373 (469)
....+.+...+.+++.+++.||+|||+.+.++.+..++.... .+.. . + +.....+...+.|
T Consensus 279 ~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~-~~~~--~-~---------------~~~~~~~~~~~~~ 339 (405)
T TIGR00891 279 IVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIP-VFAI--G-A---------------NVAVLGLGLFFQQ 339 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHH-HHHh--C-C---------------chHHHHHHHHHHH
Confidence 334566777888899999999999999988776554322111 1111 0 1 1222222223334
Q ss_pred cchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccC
Q 012185 374 FPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGG 429 (469)
Q Consensus 374 i~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~ 429 (469)
+..+....+-.++++|..|++ .+|+.+|+.|....+...+.+.+.|.+.+..|.
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~ 393 (405)
T TIGR00891 340 MLVQGIWGILPKHLGEYFPTD--QRAAGLGFTYQLGNLGGALAPIIGALLAQRLDE 393 (405)
T ss_pred HHHccchhhHHHHHhhhCCcc--hhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 443334444456889999876 678899999999999999999999998887773
No 45
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.48 E-value=5.9e-12 Score=129.97 Aligned_cols=266 Identities=12% Similarity=0.091 Sum_probs=151.6
Q ss_pred HHHHHhcCCCccchh--hHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHHhhhe
Q 012185 67 ARALLADLSGPDQRN--SANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVT 144 (469)
Q Consensus 67 ~rAli~D~~p~~qr~--~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~~~it 144 (469)
..+++.|..|+++|. ..+++.+...++|.++|..++... .+. -.||..|.+.++..+++.++.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l--~~~-------------~gw~~~f~~~~~~~~~~~~~~ 190 (393)
T PRK15011 126 MFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYAL--AMG-------------FSFTVMYLSAAVAFIVCGVMV 190 (393)
T ss_pred HHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHH--HHh-------------cChHHHHHHHHHHHHHHHHHH
Confidence 456667766655443 345677777888888888777641 100 158888888777666666655
Q ss_pred eEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCCCCCCccc
Q 012185 145 IYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGA 224 (469)
Q Consensus 145 ~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (469)
.+.+||.|..+.+..+ + . .
T Consensus 191 ~~~~~~~~~~~~~~~~---------------------------------------------------~---------~-~ 209 (393)
T PRK15011 191 WLFLPSMRKELPLATG---------------------------------------------------T---------L-E 209 (393)
T ss_pred HhhcCccCCCCccccc---------------------------------------------------c---------c-c
Confidence 6667876422110000 0 0 0
Q ss_pred hHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHH
Q 012185 225 VLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGV 304 (469)
Q Consensus 225 ~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i 304 (469)
.. ++.++..+......++.|..+..+..+.+.|+.++ ++-++ .+ .| +...+..+...+
T Consensus 210 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-~~~~~---------~~----~g-~~~~~~~~~~i~ 267 (393)
T PRK15011 210 AP-------RRNRRDTLLLFVICTLMWGTNSLYIINMPLFIINE-LHLPE---------KL----AG-VMMGTAAGLEIP 267 (393)
T ss_pred cc-------ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCH---------HH----HH-HHHHHHHHHHHH
Confidence 00 01122233333444555555555555666666542 33221 11 22 122233445566
Q ss_pred HHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccc
Q 012185 305 SSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPF 384 (469)
Q Consensus 305 ~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~ 384 (469)
..++.+++.||+|||+....+.+...+.+....+.. +....++...+.++.++.....-.
T Consensus 268 ~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~l~~~~l~~~~~g~~~~~~~ 327 (393)
T PRK15011 268 TMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAH--------------------SPAILLGLQLLNAIYIGILGGIGM 327 (393)
T ss_pred HHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHh--------------------hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 788899999999999987766554443322221111 122223333333333333222223
Q ss_pred hhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccCC
Q 012185 385 AITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL 456 (469)
Q Consensus 385 aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpet 456 (469)
+...|..|+ .+|..+|+.|....+.+.+.+...|.+.+..|- ...|.+.+++.+++.+ ..+++|||
T Consensus 328 ~~~~~~~p~---~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~--~~~~~~~~~~~~~~~~-~~~~~~~~ 393 (393)
T PRK15011 328 LYFQDLMPG---QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNY--HAVFWFALVMIIATLF-CLLRIKDV 393 (393)
T ss_pred HHHHHhCCC---CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--HHHHHHHHHHHHHHHH-HHHhhcCC
Confidence 456777774 478889999999999999999999988876652 3567778887777666 55666764
No 46
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.48 E-value=4.6e-12 Score=131.85 Aligned_cols=305 Identities=12% Similarity=0.065 Sum_probs=168.5
Q ss_pred HHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHH
Q 012185 55 LLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAV 134 (469)
Q Consensus 55 llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~ 134 (469)
+.-++.........+++.|..|+++|+++.++.+...++|.++|..++... .+ ... ..+ ...||++|.+.+
T Consensus 105 l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l-~~-~~~-~~~------~~gwr~~f~~~~ 175 (412)
T TIGR02332 105 LVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYI-LA-LDG-LMA------LKGWQWLFLLEG 175 (412)
T ss_pred HHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh-CCC-CCC------ccchhHHHHHHH
Confidence 344454545555668899999999999999999999999999998887542 00 000 000 136999999987
Q ss_pred HHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhcccccc
Q 012185 135 VFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDT 214 (469)
Q Consensus 135 i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (469)
++.++...+..+.+||+|....-..+ ++++. .. +..+.. ..+ .+ +..+
T Consensus 176 ~~~l~~~~~~~~~~~~~p~~~~~l~~--~~~~~----~~---~~~~~~----------------~~~--~~---~~~~-- 223 (412)
T TIGR02332 176 FPSVILGVMTWFWLDDSPDKAKWLDE--EDKKA----LK---EMIDND----------------QLT--LE---QPEG-- 223 (412)
T ss_pred HHHHHHHHHHhhccCCCcccCCCCCH--HHHHH----HH---HHHHhc----------------ccc--cc---cccc--
Confidence 77665555566778998743110000 00000 00 000000 000 00 0000
Q ss_pred CCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHH
Q 012185 215 NGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFG 294 (469)
Q Consensus 215 ~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~ 294 (469)
+. .......++.++.+++ +.++...+..++...+++.+..|.+.|+.+..+ +.+ . ...| ..
T Consensus 224 -~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~-~~s-----------~-~~~~-~~ 284 (412)
T TIGR02332 224 -AF--AHAAMPQRSMLREIFT--PAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQ-GSS-----------N-IMIG-LL 284 (412)
T ss_pred -cc--ccccccHHHHHHHhcC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCc-----------H-HHhH-HH
Confidence 00 0001122334555442 446767777777778888889999998865211 110 0 1122 23
Q ss_pred HHHHHHHHHHHHHhHHHhhhhcCchHHH-HHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhc
Q 012185 295 LLLNSVVLGVSSFLIEPMCRWIGSRLVW-AISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLG 373 (469)
Q Consensus 295 l~i~~iv~~i~s~i~~~l~~~ig~r~l~-~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 373 (469)
.....+...+..++.+++.||+++|+.. +...++.++++. +.... + + ... .+..+.+.+
T Consensus 285 ~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~---~~~~~--~------------~--~~~-~~~~~~~~~ 344 (412)
T TIGR02332 285 AAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWL---LASAT--D------------H--NLI-QLLGIIMAS 344 (412)
T ss_pred hhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHH---HHHhc--C------------C--HHH-HHHHHHHHH
Confidence 3455566777788999999999977753 334434333221 11110 0 0 011 111111122
Q ss_pred cchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHH
Q 012185 374 FPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSA 442 (469)
Q Consensus 374 i~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~ 442 (469)
++......+.+....|..|.+ .+|+.+|+.|....+++++.+.+.|.+.+..|+. ...|.+.+++.
T Consensus 345 ~g~~~~~~~~~~~~~~~~~~~--~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~-~~~~~~~~~~~ 410 (412)
T TIGR02332 345 MGSFSAMAIFWTTPDQSISLQ--ARAIAIAVINATGNIGSALSPFLIGILKDATGSF-NSGLWFVAALL 410 (412)
T ss_pred HHhhhhhhHHHhhcccccchH--HHHHHHHHHHHhhhhhhhhhhhhcccccccCCCC-chhHHHHHHHH
Confidence 222211222223445667765 6888899999999999999999999998887653 35565555543
No 47
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.48 E-value=6.8e-12 Score=129.05 Aligned_cols=253 Identities=16% Similarity=0.052 Sum_probs=144.3
Q ss_pred HHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHH
Q 012185 55 LLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAV 134 (469)
Q Consensus 55 llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~ 134 (469)
+..++......+..+++.|..|+++|+++.++.+....+|..++..++... .+ ...|+..|.+.+
T Consensus 100 l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l--~~-------------~~g~~~~~~~~~ 164 (392)
T PRK10473 100 LQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLI--ML-------------KFPWQSLFYTMA 164 (392)
T ss_pred HHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--Hh-------------CcChHHHHHHHH
Confidence 344555566778899999999999999999999998888888887776531 00 124778888877
Q ss_pred HHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhcccccc
Q 012185 135 VFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDT 214 (469)
Q Consensus 135 i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (469)
++.+++.++.....||++....++ + +
T Consensus 165 ~~~~i~~~~~~~~~~~~~~~~~~~-~---------------------------------------------------~-- 190 (392)
T PRK10473 165 AMGILVLLLSLFILKETRPARAPA-A---------------------------------------------------S-- 190 (392)
T ss_pred HHHHHHHHHHHHHcCCCCCcccCC-c---------------------------------------------------c--
Confidence 766666666666677764211000 0 0
Q ss_pred CCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHH
Q 012185 215 NGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFG 294 (469)
Q Consensus 215 ~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~ 294 (469)
......++.+++ +.++..++..++.+.+...+..+.+.++.+ .++-++ + ..| ..
T Consensus 191 ------~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~-----------~--~~~-~~ 244 (392)
T PRK10473 191 ------SKPRENSESLLN-----RFFLSRLVITTLSVTVILTFVNTSPVLLME-QMGFSR-----------G--EYA-II 244 (392)
T ss_pred ------chHHHHHHHHhC-----HHHHHHHHHHHHHHHHHHHHHHhCHHHHHH-HcCCCH-----------H--HHH-HH
Confidence 000011222221 234444445555555555555555554433 222221 0 122 34
Q ss_pred HHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhcc
Q 012185 295 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGF 374 (469)
Q Consensus 295 l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi 374 (469)
+..+++...+.+++.+++.||+|+|+.+.++.++.++++....+... ....+..+.+.+.
T Consensus 245 ~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~l~~~ 304 (392)
T PRK10473 245 MALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPS--------------------HAVSLFGITLICA 304 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHH
Confidence 44566777888899999999999999999988877776655444321 1111222222222
Q ss_pred chhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccC
Q 012185 375 PLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGG 429 (469)
Q Consensus 375 ~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~ 429 (469)
+.+..... ....+..|.+ +..| ..+....+.|.+.+.+.+.+.+..|.
T Consensus 305 g~~~~~~~--~~~~~~~~~~-~~~g----~~~~~~~~~~~~g~~~~~~l~~~~g~ 352 (392)
T PRK10473 305 GFSVGFGV--AMSQALGPFS-LRAG----VASSTLGIAQVCGSSLWIWLAAVLGI 352 (392)
T ss_pred HHHHHhHH--HHHHHhccCc-cccc----HHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 22222211 2333344443 2334 44455567777777777777766663
No 48
>PRK15075 citrate-proton symporter; Provisional
Probab=99.46 E-value=4.3e-12 Score=132.80 Aligned_cols=267 Identities=11% Similarity=0.039 Sum_probs=139.7
Q ss_pred ccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHH
Q 012185 58 LANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFL 137 (469)
Q Consensus 58 ~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~ 137 (469)
++......+..+++.|..|+++|+++.++.+....+|..+|..+|... .....+.... .-+||+.|.+.++..
T Consensus 129 ~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l-~~~~~~~~~~------~~gWr~~f~~~~~~~ 201 (434)
T PRK15075 129 FSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLL-NQWLSPAQMA------EWGWRIPFLIGCLIV 201 (434)
T ss_pred ccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCHHHHh------ccchHHHHHHHHHHH
Confidence 333334456789999999999999999998887777777766666431 0000000000 136899998866543
Q ss_pred HHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCC
Q 012185 138 TLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGS 217 (469)
Q Consensus 138 ~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (469)
.+... .++.+....+..+ ..++ +
T Consensus 202 ~~~~~-----~~~~~~e~~~~~~-------------------------------------------------~~~~--~- 224 (434)
T PRK15075 202 PFIFL-----IRRSLEETEEFLA-------------------------------------------------RKHR--P- 224 (434)
T ss_pred HHHHH-----HHHhcCCCHHHHH-------------------------------------------------hhhc--c-
Confidence 32221 2222110000000 0000 0
Q ss_pred CCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHH
Q 012185 218 FNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLL 297 (469)
Q Consensus 218 ~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i 297 (469)
.....++.+.+. ++.....++..+++..+++.+..|.++|+.++ ++-++ ++ .+ +...+
T Consensus 225 ---~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-~g~~~----------~~---~~-~~~~~ 282 (434)
T PRK15075 225 ---SMREIFRSLAAN----WRIVLAGMLMVAMTTVSFYLITVYTPTFGKTV-LHLSA----------AD---SL-LVTLC 282 (434)
T ss_pred ---ccccHHHHHHHh----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCH----------HH---HH-HHHHH
Confidence 011112222221 12222224444556667788888899888652 33221 11 11 33445
Q ss_pred HHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHH-HHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccch
Q 012185 298 NSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMA-TTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPL 376 (469)
Q Consensus 298 ~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~ 376 (469)
+++...+.+.+.+++.||+|||+++..+.++.++... ...... . + + ............|+.+
T Consensus 283 ~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~--~-~------------~--~~~~~~~~~~~~~~~~ 345 (434)
T PRK15075 283 VGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLV--A-A------------P--SFARMLAVELWLSFLY 345 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH--c-C------------C--chHHHHHHHHHHHHHH
Confidence 6667778888899999999999988776544322111 111111 0 0 0 0111112222234444
Q ss_pred hhhccccchhhhccccCCCCCccchhhHH-HHHHHHHHHHHhhccccceecccC
Q 012185 377 AITYSVPFAITAELTADSGGGQGLAIGVL-NLAIVIPQMIVSLGAGPWDALFGG 429 (469)
Q Consensus 377 a~~~~vP~aLise~~p~~~~~~G~~~gi~-n~~i~l~Qil~s~~~g~l~~~~g~ 429 (469)
+......+++++|..|++ .+|+.+|+. |+...+...+.+...|.+.+..|.
T Consensus 346 g~~~~~~~~~~~e~~p~~--~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~ 397 (434)
T PRK15075 346 GSYNGAMVVALTEVMPAE--VRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGD 397 (434)
T ss_pred HHHHhhHHHHHHHHCCCC--ccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCC
Confidence 444444456889999987 456667775 334334345567777777777664
No 49
>PRK09848 glucuronide transporter; Provisional
Probab=99.46 E-value=6e-12 Score=132.20 Aligned_cols=158 Identities=16% Similarity=0.071 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC
Q 012185 238 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 317 (469)
Q Consensus 238 ~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig 317 (469)
|+++.+++..++.+.++..+..+.+.|+.+ +++.++ ..+.+.+....+...+.+.+.+++.||+|
T Consensus 228 ~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~--------------~~~~~~~~~~~~~~~~~~~l~~~l~~r~g 292 (448)
T PRK09848 228 RPLFMLCIGALCVLISTFAVSASSLFYVRY-VLNDTG--------------LFTVLVLVQNLVGTVASAPLVPGMVARIG 292 (448)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhheeeEee-ecCChH--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 456777888888888877777666665543 444211 11222222233445667788899999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCC---
Q 012185 318 SRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADS--- 394 (469)
Q Consensus 318 ~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~--- 394 (469)
+|+++.++.++.+++.+.+.+.. + .+.+..++...+.|++.+.....+.+++++..+..
T Consensus 293 ~~~~~~~g~~~~~i~~~~~~~~~----~--------------~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~ 354 (448)
T PRK09848 293 KKNTFLIGALLGTCGYLLFFWVS----V--------------WSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYL 354 (448)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcC----c--------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHh
Confidence 99999999888777655443221 0 02333445556678888888888899998887643
Q ss_pred --CCCccchhhHHHHHHHHHHHHHhhccccceeccc
Q 012185 395 --GGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFG 428 (469)
Q Consensus 395 --~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g 428 (469)
+|..|.++|+.|...-+++.+.+.+.+.+++..|
T Consensus 355 ~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G 390 (448)
T PRK09848 355 TGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSG 390 (448)
T ss_pred hCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 2467999999999999999998888887766554
No 50
>PRK12382 putative transporter; Provisional
Probab=99.46 E-value=5.9e-12 Score=129.51 Aligned_cols=135 Identities=17% Similarity=0.099 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhcc
Q 012185 295 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGF 374 (469)
Q Consensus 295 l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi 374 (469)
...+++...+.+.+.+++.||+|+|+....+..++++++....+.. +.+..++...+.|+
T Consensus 255 ~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~l~g~ 314 (392)
T PRK12382 255 LTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAP--------------------TAWVALAGAALTGA 314 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcc--------------------cHHHHHHHHHHHHH
Confidence 3345566677788899999999999998888877777655433321 13344455566777
Q ss_pred chhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcc
Q 012185 375 PLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKL 453 (469)
Q Consensus 375 ~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~v 453 (469)
+.+.....=.+.+.|..|++ .+|+.+|+.|....+.+.+.+...|.+.+..| ....|.+.+++.+++.+..++..
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~ 389 (392)
T PRK12382 315 GCSLIFPALGVEVVKRVPSQ--VRGTALGGYAAFQDIAYGVSGPLAGMLATSFG--YPSVFLAGAISAVLGIIVTILSF 389 (392)
T ss_pred HHHhHHHHHHHHHHHhcCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--chHHHHHHHHHHHHHHHHHHhhc
Confidence 77754443334667777765 68999999999999999999999998888776 34678888888888888665443
No 51
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.45 E-value=1e-11 Score=128.46 Aligned_cols=279 Identities=11% Similarity=0.035 Sum_probs=156.2
Q ss_pred ccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHH
Q 012185 60 NNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTL 139 (469)
Q Consensus 60 ~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i 139 (469)
......+..++++|..|+|+|++++++.....++|.++|..++.. +... ...||..|.+.++..++
T Consensus 108 ~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~-----l~~~---------~~gw~~~f~i~a~~~l~ 173 (402)
T PRK11902 108 SASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALW-----LADR---------VLGWGNTYLLMAGLMLA 173 (402)
T ss_pred HHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHH-----HHhc---------ccCHHHHHHHHHHHHHH
Confidence 333444689999999999999999999988777888887655432 1100 02588899887776655
Q ss_pred HhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCCCC
Q 012185 140 CALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFN 219 (469)
Q Consensus 140 ~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (469)
+.+. .+.+||++..+.++++ .+
T Consensus 174 ~~l~-~~~~~e~~~~~~~~~~--------------------------------------------------~~------- 195 (402)
T PRK11902 174 GALT-TLWAPEPEVPARPPRS--------------------------------------------------LG------- 195 (402)
T ss_pred HHHH-HHhcCCCcccccccch--------------------------------------------------hH-------
Confidence 5543 4567775432110000 00
Q ss_pred CCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHH
Q 012185 220 DGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNS 299 (469)
Q Consensus 220 ~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~ 299 (469)
......+++++++ |.++.+++..++...+...+..+.+.++-+ .++.++ + ..| +.+...+
T Consensus 196 ~~~~~~~~~l~~~-----~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~~G~~~-----------~--~~g-~~~~~~~ 255 (402)
T PRK11902 196 EAVVGPLRDFFSR-----RGAWALLLLIVLYKLGDAFAGSLSTTFLIR-GAGFSA-----------G--EVG-IVNKTLG 255 (402)
T ss_pred HHHHHHHHHHHhC-----cCHHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCCH-----------H--HHH-HHHhHHH
Confidence 0011233444432 345555554444333222221222333322 122221 1 122 1221222
Q ss_pred -HHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHH----HHhcc
Q 012185 300 -VVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVF----TLLGF 374 (469)
Q Consensus 300 -iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~Gi 374 (469)
+...+...+.+++.||+|+|+...++.++.+++.+......... + +.+..+... ...|+
T Consensus 256 ~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~-~---------------~~~~~~~~~~~~~~~~g~ 319 (402)
T PRK11902 256 LAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTP-K---------------HLWTMALAIGIENLCGGM 319 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC-C---------------cHHHHHHHHHHHHHHHHH
Confidence 33566778889999999999987776665554433322222110 0 122222222 24566
Q ss_pred chhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhccc
Q 012185 375 PLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLP 454 (469)
Q Consensus 375 ~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vp 454 (469)
.++........++.+..| +.+.++.+....+.+++.+...|.+.+..|. ...|.+++++++++.+.. ++.+
T Consensus 320 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l~~~~~~~~~G~l~~~~G~--~~~f~~~~~~~~~~~~~~-~~~~ 390 (402)
T PRK11902 320 GTAAFVALLMALCNRSFS------ATQYALLSALASVGRVYVGPTSGYLVEAYGW--PGFYLMTVVIALPGLALL-WLMR 390 (402)
T ss_pred HHHHHHHHHHHhcCCCCc------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh--HHHHHHHHHHHHHHHHHH-HHHh
Confidence 666666666666666665 3456777777778888777788888888873 467888998888887744 4444
Q ss_pred C
Q 012185 455 H 455 (469)
Q Consensus 455 e 455 (469)
.
T Consensus 391 ~ 391 (402)
T PRK11902 391 G 391 (402)
T ss_pred h
Confidence 3
No 52
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.43 E-value=4.6e-12 Score=133.92 Aligned_cols=299 Identities=9% Similarity=0.098 Sum_probs=169.2
Q ss_pred cccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHH
Q 012185 59 ANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLT 138 (469)
Q Consensus 59 a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~ 138 (469)
+......+..+++.|..|+++|+++.++.+...++|.+++..+.... ++..+ ...|+..|.+..++.+
T Consensus 135 ~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~-~~~~~-----------~~~~~~~f~~~g~~~~ 202 (467)
T PRK09556 135 FQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWG-ANYFF-----------DGHVIGMFIFPSIIAL 202 (467)
T ss_pred HHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHH-HHhhc-----------cCcchhHHHHHHHHHH
Confidence 33444556778999999999999999999999999999987665321 11110 1246677776555444
Q ss_pred HHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCCC
Q 012185 139 LCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSF 218 (469)
Q Consensus 139 i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (469)
+..++..+.+||+|......++ ++..++.. +.+ .++ ++
T Consensus 203 ~~~i~~~~~~~~~p~~~~~~~~----~~~~~~~~--------------------------~~~---------~~~-~~-- 240 (467)
T PRK09556 203 IIGFIGLRYGSDSPEELGWGKA----EEIFGEPI--------------------------SEE---------DKE-TE-- 240 (467)
T ss_pred HHHHHHHHhCCCChhhcCCCCh----hhcccCcc--------------------------chh---------hhc-cc--
Confidence 3333344556665532111000 00000000 000 000 00
Q ss_pred CCCccchHHHHH-HHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHH
Q 012185 219 NDGPGAVLVNLL-TSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLL 297 (469)
Q Consensus 219 ~~~~~~~~~~l~-~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i 297 (469)
. ...+.++.+ +...+ .+.++.+++..++...++..+..+.+.|+.+ .++-++ .+ .+ +...+
T Consensus 241 -~-~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~-~~g~s~----------~~---a~-~~~~~ 302 (467)
T PRK09556 241 -S-TDMTKWQIFVEYVLK-NPVIWLLCFANIFLYIVRIGIDNWSPVYAFQ-ELGFSK----------ED---AI-NTFTL 302 (467)
T ss_pred -c-ccCcHHHHHHHHHHc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCCCH----------HH---HH-HHHHH
Confidence 0 001112211 11111 2457777888888777777888888888865 344332 11 12 33445
Q ss_pred HHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccc-h
Q 012185 298 NSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFP-L 376 (469)
Q Consensus 298 ~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~-~ 376 (469)
..+...+.+++.+++.||+|||+...++..+.+++.....+.. . + +.+...+...++|+. .
T Consensus 303 ~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~--~-~---------------~~~~~~~~~~~~G~~~~ 364 (467)
T PRK09556 303 FEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQH--A-T---------------SEYMYLASLFALGFLVF 364 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHh--c-C---------------cHHHHHHHHHHHHHHHh
Confidence 5667788899999999999999877665444333221111111 0 0 122333334445532 2
Q ss_pred hhhccccchhhhccccCCCCCccchhhHHHHHHHH-HHHHHhhcccccee------------cccCccchHHHHHHHHHH
Q 012185 377 AITYSVPFAITAELTADSGGGQGLAIGVLNLAIVI-PQMIVSLGAGPWDA------------LFGGGNIPAFVLASLSAL 443 (469)
Q Consensus 377 a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l-~Qil~s~~~g~l~~------------~~g~~~~~~f~~~~v~~l 443 (469)
+... ...+...|..|++ .+|+..|+.|....+ +.++.+.+.|.+.+ ..| ....|.+.+++.+
T Consensus 365 ~~~~-~~~~~~~~~~p~~--~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~--~~~~f~~~~~~~~ 439 (467)
T PRK09556 365 GPQL-LIGVAAVGFVPKK--AIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTG--WAGTFAALDIAAI 439 (467)
T ss_pred hHHH-HHHHHHHhhcchh--hHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccC--hHHHHHHHHHHHH
Confidence 2222 2234566888875 789999999999886 77888888888877 223 3467877788788
Q ss_pred HHHHHhhhc
Q 012185 444 AGGVVATLK 452 (469)
Q Consensus 444 iaai~~~~~ 452 (469)
+++++.+++
T Consensus 440 ~~~~~~~~~ 448 (467)
T PRK09556 440 GCICLMAIV 448 (467)
T ss_pred HHHHHHHHH
Confidence 877654433
No 53
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.43 E-value=2.7e-11 Score=125.33 Aligned_cols=292 Identities=13% Similarity=0.055 Sum_probs=166.2
Q ss_pred HhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHH
Q 012185 56 LDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVV 135 (469)
Q Consensus 56 lD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i 135 (469)
.-++.........++++|.+|+|+|++++++.+....+|.++|..+|++. ..+ .++..+.+.+.
T Consensus 98 ~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l-----~~~-----------~~~~~~~i~~~ 161 (393)
T PRK11195 98 VGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGAL-----ADP-----------HAEAALAVCAL 161 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHH-----------HHHHHHHHHHH
Confidence 44444555556789999999999999999999999999999999988752 110 13445555544
Q ss_pred HHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccC
Q 012185 136 FLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTN 215 (469)
Q Consensus 136 ~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (469)
..+++.+ ..+.+||+|.+..+++. +.... .+
T Consensus 162 ~~~~~~~-~~~~l~~~~~~~~~~~~--------------------------------------~~~~~-------~~--- 192 (393)
T PRK11195 162 IYLLAAL-FNLFIPRLGARRPGQSW--------------------------------------NPIAL-------LR--- 192 (393)
T ss_pred HHHHHHH-HHhcCCCCcccccccCC--------------------------------------CHHHH-------HH---
Confidence 4433332 33567776532111000 00000 00
Q ss_pred CCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHH
Q 012185 216 GSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGL 295 (469)
Q Consensus 216 ~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l 295 (469)
.....++.+++ -| .++......++.|.......+..+.|+.+ .++.++ . ..| +.+
T Consensus 193 -----~~~~~~~~l~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lg~s~---------~----~~G-~~~ 247 (393)
T PRK11195 193 -----DFFHACRVLWR----DK-LGRFSLAGTTLFWGAGATLRFLVLAWAPV-ALGITL---------N----QPA-YLQ 247 (393)
T ss_pred -----HHHHHHHHHHh----Cc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCh---------h----HHH-HHH
Confidence 00111222332 22 34443334444566666666666667754 455432 1 123 344
Q ss_pred HHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccc
Q 012185 296 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFP 375 (469)
Q Consensus 296 ~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~ 375 (469)
..+++...+.+++.+++.||.++|++...+. +.++.+....+.. +.+..++...+.|++
T Consensus 248 ~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~--------------------~~~~~~~~~~~~G~~ 306 (393)
T PRK11195 248 AVVAIGIAVGAGAAARLVTLETVLRVLPAGI-LMGLVVLLMALQH--------------------SLLPAYPLLILIGAL 306 (393)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcccchHHHHH-HHHHHHHHHHHHh--------------------HHHHHHHHHHHHHHh
Confidence 5566777888899999999989888777764 3333332222211 133344455566776
Q ss_pred hhhhccccc-hhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHh-hhcc
Q 012185 376 LAITYSVPF-AITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVA-TLKL 453 (469)
Q Consensus 376 ~a~~~~vP~-aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~-~~~v 453 (469)
.+... +|. +++.+ .++++.++|...|+.|+...+.+.+...+++.+ ...|-. +.+.+.++..+++.... .++-
T Consensus 307 ~g~~~-~~~~~~~q~-~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 381 (393)
T PRK11195 307 GGFFV-VPMNALLQH-RGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL-VKLGVP--VVAVIVGFGLLVALAMALLWRW 381 (393)
T ss_pred hhhhh-hhHHHHHHh-hCcccccchhHHHHHhHHHHHHHHHHHHHHHHH-HHcCCC--HHHHHHHHHHHHHHHHHHHHHH
Confidence 66544 333 34444 344323478899999999999999988877755 344433 45555555444444433 3556
Q ss_pred cCCCCCCccC
Q 012185 454 PHLSSNSFRS 463 (469)
Q Consensus 454 pet~g~~~~~ 463 (469)
+|.+-|-|.+
T Consensus 382 ~~~~~~~~~~ 391 (393)
T PRK11195 382 HRRNQRQFDS 391 (393)
T ss_pred HHhccccccC
Confidence 6666666654
No 54
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.43 E-value=2.5e-11 Score=125.63 Aligned_cols=177 Identities=14% Similarity=0.040 Sum_probs=111.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC
Q 012185 238 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 317 (469)
Q Consensus 238 ~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig 317 (469)
|.++..++..++...+.+.+..|.+.|+.+ ++-++ . + .+ +.+....+...+.+.+.+++.||++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~g~s~---------~-~---~~-~~~~~~~~~~~ig~~~~g~l~dr~~ 285 (402)
T TIGR00897 222 PNVLLGGMVRIINTIGLFGFAVFLPMFVAE--LGFST---------S-E---WL-QIWGTFFFTNIVFNVIFGIVGDKLG 285 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCh---------h-H---HH-HHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 345666666777767788888899988855 33321 1 1 11 2333455677888889999999999
Q ss_pred chHHHH-HHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCC
Q 012185 318 SRLVWA-ISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGG 396 (469)
Q Consensus 318 ~r~l~~-~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~ 396 (469)
||+... .+.+..+++.....+......+ +.+..++...+.|+..+..... .+++.|..|+
T Consensus 286 ~~~~~~~~~~l~~~~~~~~l~~~~~~~~~---------------~~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~~--- 346 (402)
T TIGR00897 286 WMNTVRWFGGVGCGIFTLALYYIPQHFGH---------------SFAVALIIAIALGIFLAGYVPL-AAVFPTLAPK--- 346 (402)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHccCC---------------cHHHHHHHHHHHHHHHHHHHHH-HHHHHhhCcc---
Confidence 888653 3333333332222222110000 1333444555566666543222 2455565443
Q ss_pred CccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhh
Q 012185 397 GQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATL 451 (469)
Q Consensus 397 ~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~ 451 (469)
.+|+.+|+.|....+.+++.+.+.|.+.+..|. ..+|.+.+++.+++++..++
T Consensus 347 ~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~--~~~~~~~a~~~~i~~~~~~~ 399 (402)
T TIGR00897 347 HKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGA--IGVVWIFAALYVVSAFLTAF 399 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch--HHHHHHHHHHHHHHHHHHHH
Confidence 578999999999999999999999999887763 36788888888887775443
No 55
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.43 E-value=2.8e-11 Score=123.48 Aligned_cols=285 Identities=18% Similarity=0.160 Sum_probs=196.9
Q ss_pred HHHHHHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhH
Q 012185 48 VFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLK 127 (469)
Q Consensus 48 ~~v~g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~ 127 (469)
+.+++=.+.-++.....+-.-++.+|++||+||+++.++...=..+..++|--+|.+. .+. -.||
T Consensus 103 ~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~i--g~~-------------~GWR 167 (394)
T COG2814 103 VLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFL--GQL-------------FGWR 167 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHH--HHH-------------hhHH
Confidence 3444555667777788888899999999999999999998666666666665555431 111 1589
Q ss_pred HHHHHHHHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhh
Q 012185 128 AAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHI 207 (469)
Q Consensus 128 ~~f~i~~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (469)
..|.+.+.+.+++++.....+| |....++
T Consensus 168 ~~F~~ia~l~ll~~~~~~~~lP--~~~~~~~------------------------------------------------- 196 (394)
T COG2814 168 ATFLAIAVLALLALLLLWKLLP--PSEISGS------------------------------------------------- 196 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhCC--CccCCCC-------------------------------------------------
Confidence 9999999988888888777787 2111110
Q ss_pred hccccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHH
Q 012185 208 SKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQG 287 (469)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~g 287 (469)
.....++.++-++ .+.++...+..++...|.|....|...++.| +.+-+ ++
T Consensus 197 --------------~~~~~~~~~~~l~--~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~-v~g~s-----------~~- 247 (394)
T COG2814 197 --------------LPGPLRTLLRLLR--RPGVLLGLLATFLFMTGHFALYTYIRPFLES-VAGFS-----------VS- 247 (394)
T ss_pred --------------CCcchhHHHHHhc--CchHHHHHHHHHHHHcchhhhHHhHHHHHHH-ccCCC-----------Hh-
Confidence 0112223333322 2456667788888888999999999999887 54433 12
Q ss_pred hHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHH
Q 012185 288 VREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLV 367 (469)
Q Consensus 288 v~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (469)
.-++.+++|++..++.+++.+++.|| +.|+......++++++++...+... ..+..++
T Consensus 248 --~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~-------------------~~~~~~~ 305 (394)
T COG2814 248 --AVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGA-------------------SPALALA 305 (394)
T ss_pred --HHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcc-------------------hHHHHHH
Confidence 23589999999999999999999999 8899888888888877765444431 2445555
Q ss_pred HHHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHH
Q 012185 368 VFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGV 447 (469)
Q Consensus 368 ~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai 447 (469)
...++|+...+..-.=..-+++..| +..+..+++.+.+..+...+-+.+.|.+++..| .....+++++..+++.+
T Consensus 306 ~~~~wg~a~~~~~~~~~~~~a~~~p---~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g--~~~~~~~~a~l~~~a~~ 380 (394)
T COG2814 306 LLFLWGFAFSPALQGLQTRLARLAP---DAADLAGSLNVAAFNLGIALGAALGGLVLDALG--YAATGWVGAALLLLALL 380 (394)
T ss_pred HHHHHHHHhhhhhhHHHHHhcccCC---CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--hHHHHHHHHHHHHHHHH
Confidence 5555665555433332223333223 356777888888888888888888999888865 34678899999998888
Q ss_pred Hhhhccc
Q 012185 448 VATLKLP 454 (469)
Q Consensus 448 ~~~~~vp 454 (469)
+++...+
T Consensus 381 ~~~~~~~ 387 (394)
T COG2814 381 LALLSAR 387 (394)
T ss_pred HHHHHHh
Confidence 6655433
No 56
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.42 E-value=6.6e-12 Score=146.63 Aligned_cols=302 Identities=14% Similarity=0.006 Sum_probs=176.9
Q ss_pred HhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHH
Q 012185 56 LDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVV 135 (469)
Q Consensus 56 lD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i 135 (469)
+.++.........+++.|..|++++++++++.+...++|.++|..++++. ... ..|++.|.+.++
T Consensus 118 ~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l-----~~~----------~~~~~~~~~~~~ 182 (1140)
T PRK06814 118 MGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLA-----TIS----------GNFVILVALLMG 182 (1140)
T ss_pred HHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHH-----Hhc----------cccHHHHHHHHH
Confidence 34444445556899999999999999999999999999999999999752 111 246677744444
Q ss_pred HHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccC
Q 012185 136 FLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTN 215 (469)
Q Consensus 136 ~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (469)
..+++ ++..+.+||.+........ +
T Consensus 183 ~~~~~-~~~~~~~~~~~~~~~~~~~---------------------------------------------------~--- 207 (1140)
T PRK06814 183 IAVLG-WLASLFIPKTGNAAPDLKI---------------------------------------------------D--- 207 (1140)
T ss_pred HHHHH-HHHHhhCCCCCCCCCCCee---------------------------------------------------c---
Confidence 44433 3345566665421111000 0
Q ss_pred CCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHH
Q 012185 216 GSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGL 295 (469)
Q Consensus 216 ~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l 295 (469)
. .......+-++.+++ .+.++.+.+..++.|+....+..+.+.|+.+ .++.++ . ..| +.+
T Consensus 208 ~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~g~~~---------~----~~g-~~~ 267 (1140)
T PRK06814 208 R----NIIRSTITLLKYAKA-DKRIWLAILGISWFWLVGAVVLSQLPLLAKE-TLGGDE---------N----VAT-LFL 267 (1140)
T ss_pred c----chHHHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHHHHHhHHHHHH-HcCCch---------H----HHH-HHH
Confidence 0 000111222233322 3456777777777777777777788888765 445432 1 122 344
Q ss_pred HHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCc-ccCCCCchhHHHHHHHHHHHhcc
Q 012185 296 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGI-EHGIGANQAIKVASLVVFTLLGF 374 (469)
Q Consensus 296 ~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Gi 374 (469)
..+++..++.+++.+++.|+.+++++...+.++.+++.+.+.+............. ...+. ...+.+..++...++|+
T Consensus 268 ~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~ 346 (1140)
T PRK06814 268 AVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFL-SKRHGWRILIDLFGLAA 346 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhh-cccccHHHHHHHHHHHH
Confidence 56667778889999999988777766666666665554433332000000000000 00000 00013344455666777
Q ss_pred chhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhh
Q 012185 375 PLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATL 451 (469)
Q Consensus 375 ~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~ 451 (469)
+.+..+..-.+++.+..|++ .+|..+|+.|+...+.+.+.++..+.+.....+ ....+.+.+++.++.++..+.
T Consensus 347 ~~~~~~~~~~~~~~~~~p~~--~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 420 (1140)
T PRK06814 347 AGGLYIVPLFAALQAWANPA--HRARVIAANNVLNAAFMVAGTIILALLQALGFS-IPWIILFIALANLIVAILILR 420 (1140)
T ss_pred HHHHhHHHHHHHHHhhCCcc--cceeeeHHHHHHHHHHHHHHHHHHHHHHHhccC-HHHHHHHHHHHHHHHHHHHHH
Confidence 77777666778888998876 788999999999999998888887776533222 223444444444444433333
No 57
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.42 E-value=3.1e-12 Score=128.13 Aligned_cols=265 Identities=20% Similarity=0.295 Sum_probs=167.3
Q ss_pred HHHHHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHH
Q 012185 49 FVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKA 128 (469)
Q Consensus 49 ~v~g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~ 128 (469)
.+++..+..++.........+++.|..|+|+|++++++.+...++|.++|..++... .+ ..+||+
T Consensus 88 ~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l--~~-------------~~~~~~ 152 (352)
T PF07690_consen 88 LLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFL--IS-------------YFGWRW 152 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHC--CC-------------HCHHCC
T ss_pred Hhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhh--hh-------------cccccc
Confidence 445666777777888889999999999999999999999999999999998888652 00 125778
Q ss_pred HHHHHHHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhh
Q 012185 129 AFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHIS 208 (469)
Q Consensus 129 ~f~i~~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (469)
.|.+.+++.+++.++..+..+|+|....++++.++. ...
T Consensus 153 ~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~------------------------------------~~~----- 191 (352)
T PF07690_consen 153 AFLISAILSLIAAILFILFLPEPPPPRERESPKESE------------------------------------SKK----- 191 (352)
T ss_dssp HHHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT--------------------------------------H-----
T ss_pred ccccccchhhhhhhhHhhhhhhcccccccccccccc------------------------------------ccc-----
Confidence 888888887777665445556654333222110000 000
Q ss_pred ccccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHh
Q 012185 209 KKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGV 288 (469)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv 288 (469)
.+ ...+.++.+++. +.++.+.+..+...+.+..+..|.+.|+.+ .++.+ +.
T Consensus 192 --~~--------~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~-------------~~ 242 (352)
T PF07690_consen 192 --PK--------PLKPGFKSLFKN-----PVLWILLIAFFLFFFVFSGFSFFLPLYLQE-VLGFS-------------GP 242 (352)
T ss_dssp --HH--------CCCH-CTHHHHH-----HCCHHHHHHHHHHHHHHHHHHHHHHHHCCH-HHHCC-------------TH
T ss_pred --cc--------cccccccccccc-----chhhhhhhhhhHHHHHHHHhhcccchhhhh-ccCCC-------------HH
Confidence 00 011113334433 223333444444455777777777776544 23322 11
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHH
Q 012185 289 REGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVV 368 (469)
Q Consensus 289 ~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (469)
....+...+.++...+.+++.+++.||+++|+...+......++.....+.... .+....++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~ 305 (352)
T PF07690_consen 243 SQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFS-----------------SSPVWLIIA 305 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHH-----------------CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHh-----------------hhHHHHHHH
Confidence 112233445566777778999999999998877777665555444333322210 023445556
Q ss_pred HHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHh
Q 012185 369 FTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVS 417 (469)
Q Consensus 369 ~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s 417 (469)
+.+.|++.+.....-.+++.|..|++ .+|+.+|+.|....+..++.+
T Consensus 306 ~~~~g~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 306 LFLIGFGFGIVFPILFSLIQELVPPE--YRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHCHHHHHHHHCCCHTC--HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHH--HHHHHHHHHHHHHHHHHHHCC
Confidence 66788888888888888999999875 789999999999998887753
No 58
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.42 E-value=1.4e-11 Score=129.99 Aligned_cols=304 Identities=11% Similarity=0.047 Sum_probs=170.8
Q ss_pred HHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHH
Q 012185 53 FWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLV 132 (469)
Q Consensus 53 ~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i 132 (469)
-.+..++.........+++.|..|+++|++++++......+|.+++..++... ... ...||..|.+
T Consensus 138 r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l-----~~~---------~~gw~~~f~i 203 (465)
T TIGR00894 138 RVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWL-----CES---------WGGWPMIFYV 203 (465)
T ss_pred HHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----Hhc---------cCCCCeehhh
Confidence 34455666666667889999999999999999999999999999998777532 100 0157788888
Q ss_pred HHHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhcccc
Q 012185 133 AVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAE 212 (469)
Q Consensus 133 ~~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (469)
..++.++..++.....+|+|....+.++ .+. .+.+ +..+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~----------~~~----------------------------~~i~---~~~~ 242 (465)
T TIGR00894 204 FGIVGCAWSLLWFVFPADDPSIHPCISK----------FEK----------------------------KYIN---SSLQ 242 (465)
T ss_pred hhHHHHHHHHHHHHHhcCCcccCCCCCH----------HHH----------------------------HHHH---hhcc
Confidence 7776655555555556776632211100 000 0000 0000
Q ss_pred ccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHH
Q 012185 213 DTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGA 292 (469)
Q Consensus 213 ~~~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~ 292 (469)
+ +..+.+.+..++++++. +.++.+++..+....+++.+..|.++|+.+ .++-++ .+ .|
T Consensus 243 ~--~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~-~~g~s~---------~~----~g- 300 (465)
T TIGR00894 243 G--QKGSTRQSLPIKAIPKS-----LPVWAIWFAIFGHFWLYTILPTYLPTFISW-VLRVSG---------KE----NG- 300 (465)
T ss_pred c--ccCCCCCCCCHHHHhcC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCcCh---------HH----hH-
Confidence 0 00000112235555543 567888888888888889999999999876 444331 11 22
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHH---HHHHHHHHHH---HHHHHHHhhhhcccCCCcccCCCCchhHHHHHH
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWA---ISNFIVFACM---ATTAIISVISVREYSGGIEHGIGANQAIKVASL 366 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~---~s~~~~ai~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (469)
+...+..+...+.+++.+++.||+++|+... ...+..++++ ....+......+ ..+..+
T Consensus 301 ~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~ 365 (465)
T TIGR00894 301 LLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSA---------------AFYLTI 365 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCC---------------chHHHH
Confidence 2233445667778888899999875432110 0011111111 111111100000 122222
Q ss_pred HHHHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceeccc-CccchHHHHHHHHHHHH
Q 012185 367 VVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFG-GGNIPAFVLASLSALAG 445 (469)
Q Consensus 367 ~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g-~~~~~~f~~~~v~~lia 445 (469)
+++.+.+...+.....-+....++.|. ..|..+|+.|+...++.++++.+.|.+.+..+ +....+|.+.++..+++
T Consensus 366 ~~~~l~~~~~~~~~~~~~~~~~~~~~~---~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~ 442 (465)
T TIGR00894 366 IILTLANAVSSGPLAGVLINSLDLAPR---FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILC 442 (465)
T ss_pred HHHHHHHHHhhhhhhhhhhchhhcChh---HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHH
Confidence 233333332222211111233344443 68999999999999999999999998876432 11245688888888888
Q ss_pred HHHhhh
Q 012185 446 GVVATL 451 (469)
Q Consensus 446 ai~~~~ 451 (469)
+++...
T Consensus 443 ~i~~~~ 448 (465)
T TIGR00894 443 VIFYLI 448 (465)
T ss_pred HHHeee
Confidence 875443
No 59
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.42 E-value=9.8e-12 Score=129.10 Aligned_cols=295 Identities=14% Similarity=0.082 Sum_probs=156.9
Q ss_pred HHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHH
Q 012185 54 WLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVA 133 (469)
Q Consensus 54 ~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~ 133 (469)
.+..++.........+++.|..|+++|+++.++.....++|.+++..++... . . ...||+.|.+.
T Consensus 114 ~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l--~-------~------~~~w~~~f~i~ 178 (426)
T PRK12307 114 FIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSF--A-------E------AYGWRAAFFVG 178 (426)
T ss_pred HHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHH--c-------c------cCCHHHHHHHH
Confidence 3445555666778899999999999999999999998899988886554321 0 0 12588888886
Q ss_pred HHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccc
Q 012185 134 VVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAED 213 (469)
Q Consensus 134 ~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (469)
++..++.+.+ ....||++.++.++.+ ++. + + .++
T Consensus 179 ~~~~~~~~~~-~~~~p~~~~~~~~~~~---------~~~-------~------------------~-----------~~~ 212 (426)
T PRK12307 179 LLPVLLVIYI-RARAPESKEWEEAKLS---------GKG-------K------------------H-----------SQS 212 (426)
T ss_pred HHHHHHHHHH-HHHCCCChHHHHhhhh---------ccc-------c------------------c-----------ccc
Confidence 6554433221 1112332211100000 000 0 0 000
Q ss_pred cCCCCCCCccchHHHHHHHhccCCHHHHH---HHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHH
Q 012185 214 TNGSFNDGPGAVLVNLLTSLRHLPPAMHV---VLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVRE 290 (469)
Q Consensus 214 ~~~~~~~~~~~~~~~l~~~~~~mP~~l~~---l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~ 290 (469)
+ . ......++++++. | .++. ++...++.+.+.+.+..+.++|+.+. +.++ + ..
T Consensus 213 ~-~---~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~----------~---~~ 268 (426)
T PRK12307 213 A-W---SVFSLSMKGLFNR----A-QFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGE--GFDT----------G---VV 268 (426)
T ss_pred c-h---hhhhHHHHHHHhh----c-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--CCCH----------H---HH
Confidence 0 0 0011133444432 2 2222 12222333333334555667766542 2221 1 11
Q ss_pred HHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHH
Q 012185 291 GAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFT 370 (469)
Q Consensus 291 G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (469)
+ ..+.++.+...+..++.+++.||+|||+++..+.++.++.++...... + + ..... ...
T Consensus 269 ~-~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~----~------------~--~~~~~--~~~ 327 (426)
T PRK12307 269 S-NLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIP----Q------------D--NYLLL--GAC 327 (426)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHc----c------------c--cHHHH--HHH
Confidence 2 233456667788888999999999999998888766555433322221 0 0 01111 111
Q ss_pred Hhccchh--hhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHH
Q 012185 371 LLGFPLA--ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVV 448 (469)
Q Consensus 371 ~~Gi~~a--~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~ 448 (469)
.+|+... ....+...++.|..|++ .+|+.+|+.+....+++.+.+.+.|.+.+..|... ..+...++.+.++...
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~p~~--~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~-~~~~~~~~~~~~~~~~ 404 (426)
T PRK12307 328 LFGLMATNVGVGGLVPKFLYDYFPLE--VRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGA-ALTFIVAFWTATILLI 404 (426)
T ss_pred HHHHHHhcccHhHHHHHHHHHhCcHH--HHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHH-HHHHHHHHHHHHHHhh
Confidence 1222111 11122235778999876 67888999999999999999988888877665321 2233333333333333
Q ss_pred hhhcccCCC
Q 012185 449 ATLKLPHLS 457 (469)
Q Consensus 449 ~~~~vpet~ 457 (469)
..+..|++.
T Consensus 405 ~~~~~~~~~ 413 (426)
T PRK12307 405 IGLSIPDRL 413 (426)
T ss_pred ccccCChhh
Confidence 334466653
No 60
>PRK10054 putative transporter; Provisional
Probab=99.42 E-value=5.8e-12 Score=130.32 Aligned_cols=272 Identities=10% Similarity=0.011 Sum_probs=159.4
Q ss_pred hhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHHhhhe
Q 012185 65 GPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVT 144 (469)
Q Consensus 65 ~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~~~it 144 (469)
....+++.|..|+++|+++.++.....++|..+|..++... .. ..++..|.+.++..++++++.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l-----~~-----------~g~~~~f~~~~~~~~i~~i~~ 178 (395)
T PRK10054 115 TVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLL-----VM-----------QSINLPFWLAAICSAFPLVFI 178 (395)
T ss_pred HHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HH-----------hccCcHHHHHHHHHHHHHHHH
Confidence 34788899999999999999999999999999998887642 10 135677777776666554444
Q ss_pred eEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCCCCCCccc
Q 012185 145 IYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGA 224 (469)
Q Consensus 145 ~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (469)
.+.+||.+..+.++ + + ...
T Consensus 179 ~~~~~~~~~~~~~~-~---------------------------------------------------~---------~~~ 197 (395)
T PRK10054 179 QIWVQRSEKAIATE-T---------------------------------------------------G---------SVW 197 (395)
T ss_pred HHHHhccccccccc-h---------------------------------------------------h---------hhh
Confidence 44455543111000 0 0 000
Q ss_pred hHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHH
Q 012185 225 VLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGV 304 (469)
Q Consensus 225 ~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i 304 (469)
..+++++ . |.++.+.+..++...+...+..+.+.|..+ ..+.+ .++. ..| +.+.++++....
T Consensus 198 ~~~~~~~----~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~----------~~~~-~~g-~~~~~~~~~~~~ 259 (395)
T PRK10054 198 SPSVLLQ----D-KALLWFTCSGFLASFVSGAFASCISQYVMV-VADSD----------FAEK-VVA-VVLPVNAAMVVS 259 (395)
T ss_pred hhhhhcc----C-ceehHHHHHHHHHHHHHHHhhhhHHHHHHH-hcccc----------hHHH-HHH-HHHHhhhhheee
Confidence 0111221 1 334445555555544444444444444432 11110 1111 122 334445544444
Q ss_pred HHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccc
Q 012185 305 SSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPF 384 (469)
Q Consensus 305 ~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~ 384 (469)
.....+++.||.++|+....+.+++++++....+.. + +.+..++....+|++.+.....=+
T Consensus 260 ~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~---------------~~~~~~~~~~~~~~g~~~~~p~~~ 320 (395)
T PRK10054 260 LQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSG----N---------------SLLLWGMSAAVFTVGEIIYAPGEY 320 (395)
T ss_pred ehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcc----h---------------HHHHHHHHHHHHHHHHHHHHhhHH
Confidence 556778999999999988888777766554443321 1 133334445566666654444445
Q ss_pred hhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccC
Q 012185 385 AITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPH 455 (469)
Q Consensus 385 aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpe 455 (469)
+++.+..|++ .+|.+.|+.| ..++.+.+.+..+|.+.+..|.. ..|.+.+++..++.++..+...|
T Consensus 321 ~~~~~~~p~~--~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~ 386 (395)
T PRK10054 321 MLIDHIAPPG--MKASYFSAQS-LGWLGAAINPLVSGVILTTLPPW--SLFVILALAIVAAWLLMLKGMRA 386 (395)
T ss_pred HHHHHhCCcc--cceehHhHHH-HHHHHHHHHHHHHHHHHHHcChh--hHHHHHHHHHHHHHHHHHhcccc
Confidence 6788888875 5678888766 56688889999999998887633 45666666665555555444444
No 61
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.40 E-value=2.7e-11 Score=129.52 Aligned_cols=285 Identities=18% Similarity=0.160 Sum_probs=181.4
Q ss_pred cccchh-HHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHH
Q 012185 61 NTVQGP-ARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTL 139 (469)
Q Consensus 61 n~~~~p-~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i 139 (469)
++...| ..|+++|++|+||..+|+++.+...++..++|..+|++. ..+. ...+.|.+.++.+++
T Consensus 117 ~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~L-----va~~----------G~~~~f~inalsfl~ 181 (524)
T PF05977_consen 117 SAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGIL-----VAFF----------GAAAAFLINALSFLI 181 (524)
T ss_pred HHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHH-----HHHH----------HHHHHHHHHHHHHHH
Confidence 344444 689999999999999999999999999999999998862 2211 234677777776655
Q ss_pred HhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCCCC
Q 012185 140 CALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFN 219 (469)
Q Consensus 140 ~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (469)
.+. .+...|.++. .++.+ . |
T Consensus 182 ~i~-~l~~~~~~~~--~~~~~--------------------------------------------------~----e--- 201 (524)
T PF05977_consen 182 SIL-ALLRWKPPPP--PSSLP--------------------------------------------------R----E--- 201 (524)
T ss_pred HHH-HHHHcccccc--ccccc--------------------------------------------------h----h---
Confidence 443 2333332211 00000 0 0
Q ss_pred CCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHH
Q 012185 220 DGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNS 299 (469)
Q Consensus 220 ~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~ 299 (469)
+....+++-++-+++- +.++.+.+..++..+...+++.-.+.++.+ .+++++ ..| |.-. ..++
T Consensus 202 -~~~~~l~~G~ryv~~~-~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~-~l~~~a-------~~y--Gll~-----a~~g 264 (524)
T PF05977_consen 202 -RFFSALREGLRYVRSS-PPLRSVLLRSFLFNLFASAVWALLPLFARD-VLGGGA-------SGY--GLLL-----AAFG 264 (524)
T ss_pred -hhhhhHHHHHHHHhcc-hHHHHHHHHHHHHHHhhhHHHHhhhHHHHH-HhCCcH-------HHH--HHHH-----HHHH
Confidence 0122344444444443 445554443322222222222233444433 455542 112 3323 3455
Q ss_pred HHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhh
Q 012185 300 VVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAIT 379 (469)
Q Consensus 300 iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~ 379 (469)
+-.++.+++.+++.+|++++++...+.++++++++.+++.. +.+...+.+.+.|++|...
T Consensus 265 vGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~--------------------~~~~~~~~l~l~G~~~~~~ 324 (524)
T PF05977_consen 265 VGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSP--------------------SFWLALIALFLAGAAWIIA 324 (524)
T ss_pred HHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcch--------------------HHHHHHHHHHHHHHHHHHH
Confidence 67788899999999999999998889888888777666554 2556666777889999977
Q ss_pred ccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhh-hcccCCCC
Q 012185 380 YSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVAT-LKLPHLSS 458 (469)
Q Consensus 380 ~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~-~~vpet~g 458 (469)
+..=.+++-+..|++ .+|+.++++++.....+-+.+++.|.+.+..|-. .++.++|+..+++++..+ ..+|+.+.
T Consensus 325 ~~~~~t~~Q~~~P~~--~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~--~al~~a~~~lll~~~~~~~~~l~~~~~ 400 (524)
T PF05977_consen 325 NSSLNTLVQLSVPDW--VRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVR--TALLIAGAALLLSALIALRFPLRQGEE 400 (524)
T ss_pred HHHHHHHHHHhCCHH--HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH--HHHHHHHHHHHHHHHHHHHhcCccccc
Confidence 665455666777776 6788899999999999999999999998887743 567777776666665443 44666665
Q ss_pred CCc
Q 012185 459 NSF 461 (469)
Q Consensus 459 ~~~ 461 (469)
...
T Consensus 401 ~d~ 403 (524)
T PF05977_consen 401 LDL 403 (524)
T ss_pred CCC
Confidence 333
No 62
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.40 E-value=2.9e-11 Score=124.29 Aligned_cols=270 Identities=16% Similarity=0.137 Sum_probs=154.6
Q ss_pred HHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHH
Q 012185 55 LLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAV 134 (469)
Q Consensus 55 llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~ 134 (469)
+..++.........+++.|..|+++|+++.++......+|..+|..++... . + ...||+.|.+.+
T Consensus 100 l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l-----~----~------~~gwr~~f~~~~ 164 (382)
T PRK10091 100 VSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYL-----S----Q------EFSWRYTFLLIA 164 (382)
T ss_pred HHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHH-----h----h------hccHHHHHHHHH
Confidence 344445555666778899999999999999999888888888887776531 1 0 125888998887
Q ss_pred HHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhcccccc
Q 012185 135 VFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDT 214 (469)
Q Consensus 135 i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (469)
+..++..+......||.+. ++++
T Consensus 165 ~~~~~~~~~~~~~lp~~~~---~~~~------------------------------------------------------ 187 (382)
T PRK10091 165 VFNIAVLASIYFWVPDIRD---EAKG------------------------------------------------------ 187 (382)
T ss_pred HHHHHHHHHHHHhCCCCCc---cccc------------------------------------------------------
Confidence 7665555544445666431 0000
Q ss_pred CCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHH
Q 012185 215 NGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFG 294 (469)
Q Consensus 215 ~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~ 294 (469)
+.++.+ +..++ | ..+.+....++...+.+.+..|.+.++.+ .++.++ ....+.
T Consensus 188 ------~~~~~~----~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~--------------~~~~~~ 240 (382)
T PRK10091 188 ------GLREQF----HFLRS-P-APWLIFAATMFGNAGVFAWFSYIKPYMMF-ISGFSE--------------TSMTFI 240 (382)
T ss_pred ------CHHHHH----HHhcC-h-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCH--------------HHHHHH
Confidence 000111 11111 1 23333444445555555555555555543 233221 112244
Q ss_pred HHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhcc
Q 012185 295 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGF 374 (469)
Q Consensus 295 l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi 374 (469)
..++++...+..++.+++.||+|+|++...+..+++++++.+.... + +.+..++.....++
T Consensus 241 ~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~----~---------------~~~~~~~~~~~~~~ 301 (382)
T PRK10091 241 MMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFG----G---------------MKTASLIFAFICCA 301 (382)
T ss_pred HHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHH----h---------------hHHHHHHHHHHHHH
Confidence 5566777888899999999999999998888887777665443332 1 11122222223333
Q ss_pred chhhhccc-cchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHH
Q 012185 375 PLAITYSV-PFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGV 447 (469)
Q Consensus 375 ~~a~~~~v-P~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai 447 (469)
+....... ...+..+..+. +..| .+..+....+.+.+.+...|.+.+..++. ...+.+.++.++++..
T Consensus 302 g~~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~~~g~~~Gp~~~G~l~~~~~~~-~~~~~~~~~~~~~~~~ 370 (382)
T PRK10091 302 GLFALSAPLQILLLQNAKGG--ELLG--AAGGQIAFNLGSAIGAYCGGMMLTLGLAY-NYVALPAALLSFAAMS 370 (382)
T ss_pred HHHhhhHHHHHHHHHhCCcc--hHHH--HHHHHHHHHHHHHHHHHHhHHHHHcccCc-chHHHHHHHHHHHHHH
Confidence 33322211 11233333332 2344 33447778899999999999888764433 3566666555555444
No 63
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.40 E-value=5.5e-11 Score=123.01 Aligned_cols=275 Identities=16% Similarity=0.114 Sum_probs=162.3
Q ss_pred HHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHH
Q 012185 55 LLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAV 134 (469)
Q Consensus 55 llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~ 134 (469)
+..++.........+++.|..|+++|++++++.....++|..+|..++... .+. -.||+.|.+.+
T Consensus 117 l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l--~~~-------------~gw~~~f~~~~ 181 (394)
T PRK10213 117 CLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFL--GEL-------------IGWRNVFNAAA 181 (394)
T ss_pred HHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH--Hhh-------------cCHHHHHHHHH
Confidence 345555666677899999999999999999999999999999988887642 111 15788888877
Q ss_pred HHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhcccccc
Q 012185 135 VFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDT 214 (469)
Q Consensus 135 i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (469)
++.+++.++.....||+|. ++.+
T Consensus 182 ~l~~~~~l~~~~~~p~~~~---~~~~------------------------------------------------------ 204 (394)
T PRK10213 182 VMGVLCIFWIIKSLPSLPG---EPSH------------------------------------------------------ 204 (394)
T ss_pred HHHHHHHHHHHHHCCCCCc---cccc------------------------------------------------------
Confidence 6665555443334555431 0000
Q ss_pred CCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHH
Q 012185 215 NGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFG 294 (469)
Q Consensus 215 ~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~ 294 (469)
.....++.++ -|.++...+..++...+.+.+..|.+.++.+ .++-++ + ..| +.
T Consensus 205 -------~~~~~~~~l~-----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~g~s~----------~---~~g-~~ 257 (394)
T PRK10213 205 -------QKQNTFRLLQ-----RPGVMAGMIAIFMSFAGQFAFFTYIRPVYMN-LAGFGV----------D---GLT-LV 257 (394)
T ss_pred -------chhHHHHHhc-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCh----------h---HHH-HH
Confidence 0011222222 1345554444444444555555554332222 233221 1 112 33
Q ss_pred HHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhcc
Q 012185 295 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGF 374 (469)
Q Consensus 295 l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi 374 (469)
+..+++...+.+++.+++.||. +|+.+..+.++..++........ + +.+.......+.|+
T Consensus 258 ~~~~~~~~iig~~~~~~l~~r~-~~~~l~~~~~~~~~~~~~l~~~~----~---------------~~~~~~~~~~l~G~ 317 (394)
T PRK10213 258 LLSFGIASFVGTSLSSFILKRS-VKLALAGAPLVLAVSALVLTLWG----S---------------DKIVATGVAIIWGL 317 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHHHHHHHHHh----h---------------hHHHHHHHHHHHHH
Confidence 4456667788888899999995 44444444444333322222221 1 13344455666788
Q ss_pred chhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcc
Q 012185 375 PLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKL 453 (469)
Q Consensus 375 ~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~v 453 (469)
+++.....--+++.+..|++ .+...++......+++.+.+.++|.+.+..|.. ..+..+++..++.++.+.-.+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~g~~--~~~~~~~~~~~~~~~~~~~~~ 391 (394)
T PRK10213 318 TFALVPVGWSTWITRSLADQ---AEKAGSIQVAVIQLANTCGAAIGGYALDNIGLT--SPLMLSGTLMLLTALLVTAKV 391 (394)
T ss_pred HHHhhhHHHHHHHHHHCccc---HHHHHHHHHHHHHHHHHHHHHHHHHHHhccChh--hHHHHHHHHHHHHHHHHHHHh
Confidence 77766665555777777743 455566777777788888899999988877633 567777766666666554443
No 64
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.40 E-value=3.1e-11 Score=123.96 Aligned_cols=266 Identities=12% Similarity=0.127 Sum_probs=159.4
Q ss_pred hHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHHhhhee
Q 012185 66 PARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTI 145 (469)
Q Consensus 66 p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~~~it~ 145 (469)
+..+.+.|..|+++|+++.++.+....+|..++.+++... .. ...||.+|.+.+++.++..++..
T Consensus 98 ~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l-----~~----------~~gWr~~f~~~~~l~~~~~~~~~ 162 (368)
T TIGR00903 98 NAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKI-----YT----------AGGLQLLIIPIAAVAAAGIILVL 162 (368)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HH----------ccchHHHHHHHHHHHHHHHHHHH
Confidence 4567779999999999999999999999999999888652 11 12689999885555545555556
Q ss_pred EEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCCCCCCccch
Q 012185 146 YFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAV 225 (469)
Q Consensus 146 ~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (469)
+.+||+|.++.+..+ .+ +....
T Consensus 163 ~~lp~~p~~~~~~~~--------------------------------------------------~~--------~~~~~ 184 (368)
T TIGR00903 163 AALPALPFQAAEGFG--------------------------------------------------FK--------DAVKE 184 (368)
T ss_pred HHcCCCCCCCCCCcc--------------------------------------------------hH--------HHHHH
Confidence 678997643211000 00 00112
Q ss_pred HHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHH
Q 012185 226 LVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVS 305 (469)
Q Consensus 226 ~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~ 305 (469)
++++++ .+.++.+++..++...+++.+..|.++|+.+. +-+. +. |.... +..+...+.
T Consensus 185 ~~~ll~-----~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~--g~s~----------~~----~~~~~-l~~~~g~~g 242 (368)
T TIGR00903 185 FGALAG-----RKDLWIIGAILGFGVALFDNLAIWLEAALRPA--GLED----------IA----GDAVA-LAILAGLIG 242 (368)
T ss_pred HHHHHc-----ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CCCh----------HH----HHHHH-HHHHHHHHH
Confidence 444443 25678888889999999999999999988542 2110 11 21111 111222222
Q ss_pred HHhHHHhhhhc---CchHHHHH-HHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhcc
Q 012185 306 SFLIEPMCRWI---GSRLVWAI-SNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYS 381 (469)
Q Consensus 306 s~i~~~l~~~i---g~r~l~~~-s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~ 381 (469)
.+.+.||. ++|+.+.. ..++.++++....+.. + ....+++..+.|+.......
T Consensus 243 ---~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~----~----------------~~~~~~~~~l~~~~~~~~~~ 299 (368)
T TIGR00903 243 ---VAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFEL----N----------------RLALFAFIGIAGLLMLPAYA 299 (368)
T ss_pred ---HHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcc----c----------------cHHHHHHHHHHHHhhhhhHH
Confidence 34555555 44444443 3333333222211111 0 11223333334443333333
Q ss_pred ccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccCC
Q 012185 382 VPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL 456 (469)
Q Consensus 382 vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpet 456 (469)
+=+++.+|..|++ .+|+.+|+.|....+..++.+...+.++. | ....|.+.++..+++++.+ .+.|++
T Consensus 300 ~~~~~~~~~~p~~--~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~--~~~~f~~~~~~~~i~~~~~-~~~~~~ 367 (368)
T TIGR00903 300 IIMDWIGKFCDKE--LHGKAAGAIGFTSRAISVALALAAMLFIS--S--AEAYFTFLAILITIAFAIA-LLLPND 367 (368)
T ss_pred HHHHHHHHhcchh--hcCcccchhhHHHHHHHHHHHHHHHHHhc--C--HHHHHHHHHHHHHHHHHHH-HhCCCC
Confidence 3346889999986 66777999999999998888877776663 3 2356888888888888854 444554
No 65
>PRK10504 putative transporter; Provisional
Probab=99.38 E-value=3.2e-11 Score=127.23 Aligned_cols=299 Identities=14% Similarity=0.060 Sum_probs=167.4
Q ss_pred HHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHH
Q 012185 54 WLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVA 133 (469)
Q Consensus 54 ~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~ 133 (469)
.+..++.........+++.|..|+++|+++.++.....++|..+|..++... .. ...||+.|.+.
T Consensus 106 ~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l-----~~----------~~gw~~~f~~~ 170 (471)
T PRK10504 106 VLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLL-----VE----------YASWHWIFLIN 170 (471)
T ss_pred HHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHH-----Hh----------hccHHHHHHHH
Confidence 3445555555667888999999999999999999999899999988777541 11 12588999887
Q ss_pred HHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccc----cccccCCCCCCCCCCCCCCccCCcccchhh-----
Q 012185 134 VVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRN----AISKSKHDMPAAPNANGNKVESGHESDANL----- 204 (469)
Q Consensus 134 ~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 204 (469)
.....++..++....||.+... .+.|.+...+...... ..++.+ +.........
T Consensus 171 ~~~~~l~~~~~~~~~~~~~~~~---~r~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~ 233 (471)
T PRK10504 171 IPVGIIGAIATLMLMPNYTMQT---RRFDLSGFLLLAVGMATLTLALDGSK--------------GLGLSPLAIAGLVAV 233 (471)
T ss_pred HHHHHHHHHHHHHhCCCccccC---CCCChHHHHHHHHHHHHHHHHHhcCC--------------cCCcchHHHHHHHHH
Confidence 7766666666555555543211 1111100000000000 000000 0000000000
Q ss_pred --hhhhc--cccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChh
Q 012185 205 --KHISK--KAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHE 280 (469)
Q Consensus 205 --~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~ 280 (469)
..++. ..+.+ + .++...+ ++++ .|.++..+...++.+++.....++.+.|+.+ .++.++
T Consensus 234 ~~~~~~~~~~~~~~-~---~~~~~~~-~l~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~------ 296 (471)
T PRK10504 234 GVVALLLYLLHARN-N---NRALFSL-KLFR-----TRTFSLGLAGSFAGRIGSGMLPFMTPVFLQI-GLGFSP------ 296 (471)
T ss_pred HHHHHHHHHHHHhc-C---CCCccCH-HHhc-----ccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCH------
Confidence 00000 00000 0 0111122 2332 2456667777888888876666667766654 233221
Q ss_pred hhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchh
Q 012185 281 VKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQA 360 (469)
Q Consensus 281 ~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (469)
. ..| +.+..+.+...+...+.+++.||+|+|+++..+.++.+++...+.+... . +
T Consensus 297 ---~----~~g-~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~---~------------~-- 351 (471)
T PRK10504 297 ---F----HAG-LMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVAL---L------------G-- 351 (471)
T ss_pred ---H----HHH-HHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccc---c------------c--
Confidence 1 122 3344555666667788999999999999999888777665544333210 0 0
Q ss_pred HHHHHHHHHHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceeccc
Q 012185 361 IKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFG 428 (469)
Q Consensus 361 ~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g 428 (469)
+.....+.+.+.|++.+.....-.+++.+..|++ .+|..+|+.|+...+++.+.+.+.|.+++..|
T Consensus 352 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g 417 (471)
T PRK10504 352 WYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDN--LASSGNSLLSMIMQLSMSIGVTIAGLLLGLFG 417 (471)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH--hccchHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 1222223344455555554444456777777765 67888999999999999998888887776554
No 66
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.35 E-value=1.5e-11 Score=129.61 Aligned_cols=301 Identities=14% Similarity=0.067 Sum_probs=171.2
Q ss_pred HHHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHH
Q 012185 51 IGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAF 130 (469)
Q Consensus 51 ~g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f 130 (469)
++..+..++......+..+++.|..|+++|+++.++.+....+|..+|..++... . + ...||+.|
T Consensus 95 ~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l-----~----~------~~~w~~~f 159 (485)
T TIGR00711 95 IFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWI-----I----E------NYHWRWIF 159 (485)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHh-----c----c------CcCceehh
Confidence 3444556667777788999999999999999999999999999999998887642 1 0 12578888
Q ss_pred HHHHHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcc----cccccccCCCCCCCCCCCCCCccCCcccchhhh-
Q 012185 131 LVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQ----RNAISKSKHDMPAAPNANGNKVESGHESDANLK- 205 (469)
Q Consensus 131 ~i~~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 205 (469)
.+.+.+.+++..+..+..||++... +++.|.....+.... ....++ ++..+...+.+....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~~g~~l~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~ 225 (485)
T TIGR00711 160 LINVPIGIIVVVVAFFILPRDKPAA--SENFDFLGLLLLSVGLGSLLYGLSE------------GPERGWFDSNEILILS 225 (485)
T ss_pred hhhhHHHHHHHHHHHHHcCCccccc--cCCCcHHHHHHHHHHHHHHHHHHhh------------CCCCCCCCchHHHHHH
Confidence 8877666556555555677643211 111110000000000 000000 000000000000000
Q ss_pred ---------hhhccccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCC
Q 012185 206 ---------HISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKG 276 (469)
Q Consensus 206 ---------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~ 276 (469)
...+..++ + ++... .++++. +.++..++..++..++++...+|.+.|+.+ +++.++
T Consensus 226 ~~~~~~~~~~~~~~~~~--~----~~~~~-~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~g~s~-- 290 (485)
T TIGR00711 226 ITGLVAIIAFVVWELTD--D----NPLVD-LRLFKY-----RNFTIGCVYMSLLGLGLYGSFYLLPLYLQQ-VLGYTA-- 290 (485)
T ss_pred HHHHHHHHHHHHHHHcC--C----CCccC-HHHHcC-----CChHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCH--
Confidence 00000000 0 01111 122221 345556777777778888888888888765 444332
Q ss_pred CChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCC
Q 012185 277 NDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIG 356 (469)
Q Consensus 277 ~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (469)
.+ .| +.+...++...+.+.+.+++.||+|||++..++.++.++++..+.+... ++
T Consensus 291 -------~~----~g-~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~~~---~~---------- 345 (485)
T TIGR00711 291 -------LQ----AG-LHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFTFT---PD---------- 345 (485)
T ss_pred -------HH----HH-HHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhccCC---CC----------
Confidence 11 22 3344566778888999999999999999988888777766554332110 00
Q ss_pred CchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhcccccee
Q 012185 357 ANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDA 425 (469)
Q Consensus 357 ~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~ 425 (469)
...........+.|++.+.....-...+.+..|++ .+|...|+.|....+.+.+.+.+.+.+.+
T Consensus 346 ---~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 346 ---TPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPH--KIARGSSLSNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH--HHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01223334455667776655433334455666654 67888999999999999888877776653
No 67
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.34 E-value=4.6e-11 Score=121.03 Aligned_cols=264 Identities=13% Similarity=0.064 Sum_probs=142.2
Q ss_pred HHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHH-H
Q 012185 53 FWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAF-L 131 (469)
Q Consensus 53 ~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f-~ 131 (469)
..+..++ +....+..+++.|..|+++|+++.++...+..+|..++..++... ........ ++ .....||+.| .
T Consensus 98 ~~~~g~~-~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l-~~~~~~~~-~~---~~~~~w~~~~~~ 171 (366)
T TIGR00886 98 RLFIGIA-GGSFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPI-IGSLIFGA-GL---PAHLAWGWAFVI 171 (366)
T ss_pred HHHHHHh-chhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHH-HHHHHhcc-cc---cccccccchhHH
Confidence 3344444 344567889999999999999999999988888888887776431 00000000 00 0012578888 4
Q ss_pred HHHHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccc
Q 012185 132 VAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKA 211 (469)
Q Consensus 132 i~~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (469)
+.+++..+...+..+..+|+|..+.++++.+ .. + +. ..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~------------------------------~~-------~~ 209 (366)
T TIGR00886 172 VPAGILLLPALLIFFVGADTPPGKPATGKLS---FK--G------------------------------AR-------WS 209 (366)
T ss_pred HHHHHHHHHHHHHHHhcccCCcccccchhcc---cc--c------------------------------cc-------cc
Confidence 3333333344444556677664221111000 00 0 00 00
Q ss_pred cccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHH
Q 012185 212 EDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREG 291 (469)
Q Consensus 212 ~~~~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G 291 (469)
. + ++.....++++++ +.++.+++..++.+.....+..+.+.|+.+ .++-++ . ..|
T Consensus 210 ~---~---~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~---------~----~~~ 264 (366)
T TIGR00886 210 V---G---TGALGDQLKVFRD-----RHTWILALLYSVTFGSFLGVSSIFAMFFKD-QFGLSK---------V----TAG 264 (366)
T ss_pred c---c---chhHHHHHHHHhc-----cchhhHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCcH---------H----HHH
Confidence 0 0 0001122223322 235556666777777777777888887765 344321 1 122
Q ss_pred HHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHH
Q 012185 292 AFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTL 371 (469)
Q Consensus 292 ~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (469)
+...++.+...+...+.+++.||+|+|+.+..+....+.+.....+... ++ .+....++...+
T Consensus 265 -~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------~~~~~~~~~~~~ 327 (366)
T TIGR00886 265 -AYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLV---SP-------------LSLAVFIVLFVA 327 (366)
T ss_pred -HHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCC---Cc-------------chHHHHHHHHHH
Confidence 2333455667777888899999999998888776666555443332210 00 012222222223
Q ss_pred hccchhhhccccchhhhccccCCCCCccchhhHHHHHH
Q 012185 372 LGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAI 409 (469)
Q Consensus 372 ~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i 409 (469)
.++..+.....-++++++..|. ..|..+|+.+...
T Consensus 328 ~~~~~g~~~~~~~~~~~~~~~~---~~g~~~g~~~~~~ 362 (366)
T TIGR00886 328 LFFFSGAGNGSTFALVPHIFRR---ATGAVSGLVGAIG 362 (366)
T ss_pred HHHHhccccchhhhcchhhchh---hcccHHHHHHHhc
Confidence 3333333444455677888773 6888899888754
No 68
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.34 E-value=3.1e-10 Score=117.39 Aligned_cols=256 Identities=11% Similarity=0.041 Sum_probs=147.4
Q ss_pred ccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHHh
Q 012185 62 TVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCA 141 (469)
Q Consensus 62 ~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~~ 141 (469)
.......+++.|..|+++|.++.++......+|..+|..++... .+ ...||+.|.+.++..+++.
T Consensus 117 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l--~~-------------~~~w~~~~~~~~~~~~~~~ 181 (406)
T PRK15402 117 FIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAAL--IH-------------VLPWRGMFVLFAALAALSF 181 (406)
T ss_pred hHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH-------------ccCccHHHHHHHHHHHHHH
Confidence 33455778899999999999999988877778888877666431 11 1247778877666665555
Q ss_pred hheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCCCCCC
Q 012185 142 LVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDG 221 (469)
Q Consensus 142 ~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (469)
....+..||++....++.+ .+ +
T Consensus 182 ~~~~~~~~~~~~~~~~~~~--------------------------------------------------~~--------~ 203 (406)
T PRK15402 182 FGLWRAMPETAGRVGEKLS--------------------------------------------------LK--------E 203 (406)
T ss_pred HHHHHhCCCCCcccccccc--------------------------------------------------HH--------H
Confidence 4444455664321100000 00 0
Q ss_pred ccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHH
Q 012185 222 PGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVV 301 (469)
Q Consensus 222 ~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv 301 (469)
....++.+++ -| .++.+++..++...+...+..+.+.++.+ .++.++ .+ .| +......+.
T Consensus 204 ~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~g~~~---------~~----~g-~~~~~~~~~ 263 (406)
T PRK15402 204 LGRDYKLVLK----NR-RFVAGALALGLVSLPLLAWIALSPVILIS-GEQLSS---------YE----YG-LLQVPVFGA 263 (406)
T ss_pred HHHHHHHHHc----Cc-HHHHHHHHHHHHHHHHHHHHHHhHHHHHH-HhCCCH---------HH----HH-HHHHHHHHH
Confidence 1112233332 23 35555555555444444444455555433 233221 11 22 112223345
Q ss_pred HHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhcc
Q 012185 302 LGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYS 381 (469)
Q Consensus 302 ~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~ 381 (469)
..+.+.+.+++.||+++|+...++.+.++++++...+..... + .+....++.+.+.|++.+....
T Consensus 264 ~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~--------------~~~~~~~~~~~~~g~g~~~~~~ 328 (406)
T PRK15402 264 LIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVIS-S--------------HAYLWLTAGLSLYAFGIGLANA 328 (406)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcc-c--------------ccHHHHHHHHHHHHHHHHHHhh
Confidence 566778889999999999998888877776665554432110 0 0133344555666777665544
Q ss_pred ccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceeccc
Q 012185 382 VPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFG 428 (469)
Q Consensus 382 vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g 428 (469)
...+.. ...++ +.+|...++.|+...+.|.+.+...+.+.+..+
T Consensus 329 ~~~~~~-~~~~~--~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~ 372 (406)
T PRK15402 329 GLYRLT-LFSSD--VSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGG 372 (406)
T ss_pred hHHHHH-hhhcc--ccccHHHHHHHHHHHHHHHHHHHHHHhcccCCc
Confidence 322322 23333 368999999999999999998888888776655
No 69
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.34 E-value=6.2e-11 Score=125.04 Aligned_cols=292 Identities=13% Similarity=0.094 Sum_probs=169.0
Q ss_pred hccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHH
Q 012185 57 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVF 136 (469)
Q Consensus 57 D~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~ 136 (469)
.++......|..+++.|..| ++|+++.++.+....+|..++..++.. +. . ...||+.|.+.+++
T Consensus 119 G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~-----l~----~------~~gwr~~f~~~~~~ 182 (455)
T TIGR00892 119 GLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQY-----LF----E------SFGWRGSFLILGGL 182 (455)
T ss_pred HhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHH-----HH----H------HhChHHHHHHHHHH
Confidence 34444444677788889885 789999999998888888877655542 11 0 12588899888877
Q ss_pred HHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCC
Q 012185 137 LTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNG 216 (469)
Q Consensus 137 ~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (469)
.+++.+..++..++++.....+.+.++ .. + ++. +..+. . + +
T Consensus 183 ~~~~~v~~~~~~~~~~~~~~~~~~~~~--~~-~---~~~--------------------~~~~~--~--------~---~ 223 (455)
T TIGR00892 183 LLHCCVCGALMRPVGPSQRVSKSKSKE--GL-P---PDG--------------------STKKL--S--------K---K 223 (455)
T ss_pred HHHHHHHHHHhCCCCcccccccccccc--cC-C---CCC--------------------ccccc--c--------c---c
Confidence 665544433333332211100000000 00 0 000 00000 0 0 0
Q ss_pred CCCCCccchHHHH--HHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHH
Q 012185 217 SFNDGPGAVLVNL--LTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFG 294 (469)
Q Consensus 217 ~~~~~~~~~~~~l--~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~ 294 (469)
......++. ++.++ .+.++..+...++..++++....|.+.|..+ ++.++ .+.+ +.
T Consensus 224 ----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~--~g~s~---------~~~g-----~~ 281 (455)
T TIGR00892 224 ----STAEKINRFLDFSLFT--HRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD--KGVDE---------YEAA-----FL 281 (455)
T ss_pred ----chhhhhhhhcchHHhc--CchHHHHHHHHHHHHHHccchHHHHHHHHHH--cCCCH---------HHHH-----HH
Confidence 000001110 11111 2346666677777777777777777777654 23221 1122 33
Q ss_pred HHHHHHHHHHHHHhHHHhhhh--cCchHHHHHH--HHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHH
Q 012185 295 LLLNSVVLGVSSFLIEPMCRW--IGSRLVWAIS--NFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFT 370 (469)
Q Consensus 295 l~i~~iv~~i~s~i~~~l~~~--ig~r~l~~~s--~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (469)
+.+.++...+...+.+++.|| +++|+...++ .+..+++++...+.. +.+..++...
T Consensus 282 ~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~--------------------~~~~~~i~~~ 341 (455)
T TIGR00892 282 LSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAG--------------------DYTGLVIYCI 341 (455)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhc--------------------hHHHHHHHHH
Confidence 344566677777788888887 3344433333 233333222221111 2344555666
Q ss_pred HhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHH
Q 012185 371 LLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVV 448 (469)
Q Consensus 371 ~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~ 448 (469)
+.|++++......++++.|..|++ .+|..+|+.+....+++++.+.++|.+.+..|+. ...|.+.+++.++++++
T Consensus 342 ~~G~~~g~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~-~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 342 FFGLSFGSVGALLFEVLMDLVGAQ--RFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNY-KYIFYASGSIVVSAGLF 416 (455)
T ss_pred HHHHHhchHHHHHHHHHHHHhhHH--HHhhHHhHHHHHHHHHHHccccceeeeehhcCCc-chHHHHhhHHHHHHHHH
Confidence 788888888788889999999875 6788899999999999999999999998877643 46778877777776653
No 70
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.34 E-value=7.5e-11 Score=125.03 Aligned_cols=138 Identities=11% Similarity=0.086 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHH---
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVF--- 369 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 369 (469)
+.+..+.+...+.+++.+++.||+|||+++.++.++.++..+...... + + +.+......
T Consensus 315 ~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~----~------------~--~~~~~~~~~~~~ 376 (496)
T PRK03893 315 NVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIG----G------------A--NVWVLGLLLFFQ 376 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhcc----c------------c--HHHHHHHHHHHH
Confidence 344556677788889999999999999998887665554332221111 0 0 111111111
Q ss_pred HHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHH-HHHHHHHHHHH
Q 012185 370 TLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVL-ASLSALAGGVV 448 (469)
Q Consensus 370 ~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~-~~v~~liaai~ 448 (469)
...|.+.. .+-.+++.|..|++ .+|..+|+.+....+.+.+.+...|.+.+..|.. ..+.+ ++++.+++.+.
T Consensus 377 ~~~~~~~~---~~~~~~~~~~~~~~--~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~--~~~~~~~~~~~~~~~~~ 449 (496)
T PRK03893 377 QMLGQGIS---GLLPKLIGGYFDTE--QRAAGLGFTYNVGALGGALAPILGALIAQRLDLG--TALASLSFSLTFVVILL 449 (496)
T ss_pred HHHhcccc---hhhHHHHHhhCCHH--HhhcccchhhhhhhHHHHHHHHHHHHHhccCChH--HHHHHHHHHHHHHHHHH
Confidence 12232222 22335788888875 6788899999999999999999999888877633 34433 44444444444
Q ss_pred hhhcccC
Q 012185 449 ATLKLPH 455 (469)
Q Consensus 449 ~~~~vpe 455 (469)
..+..|+
T Consensus 450 ~~~~~~~ 456 (496)
T PRK03893 450 IGLDMPS 456 (496)
T ss_pred HHhcCcH
Confidence 4444443
No 71
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.34 E-value=1.9e-10 Score=116.83 Aligned_cols=334 Identities=18% Similarity=0.160 Sum_probs=188.8
Q ss_pred CeeehhHHHHHHHHHhhcchhhHhhhcCCCcccccccCCCccchhhHHHHHHHHHhccccccchhHHHHHhcCCCccchh
Q 012185 2 HIKVRKKTAIYSCRMSDDFCCYIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRN 81 (469)
Q Consensus 2 pfi~~g~~~~~i~llll~~~~~i~~~l~d~~~~~~~~~~~~~~~i~~~v~g~~llD~a~n~~~~p~rAli~D~~p~~qr~ 81 (469)
|||..|+++...++.+.|++--.-.-.++.. +.....+.+++.+.+.+..+++++.+.|.-|++.|.+|||+|+
T Consensus 51 PyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~------~~~~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~ 124 (403)
T PF03209_consen 51 PYIWGGTLLQAGGLAIAPFALLLLAESGQQS------SGPFWLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRP 124 (403)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHccccccc------ccccHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhh
Confidence 9999999999999999998865522111111 2233447778899999999999999999999999999999999
Q ss_pred hHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHHhhheeEEeeccCCCCCCCCCC
Q 012185 82 SANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHL 161 (469)
Q Consensus 82 ~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~~~it~~~v~E~p~~~~~~~~~ 161 (469)
++.++.-.|.-+|.+++-.+.+.. ++ ++. ...+..++...+++.++..++.++ =.|++.......+
T Consensus 125 ~~v~ivw~Mli~G~iv~ai~~g~l-L~---~~s--------~~rL~~v~~~~a~i~~~l~~ia~w-g~E~r~~~~~~~~- 190 (403)
T PF03209_consen 125 RVVAIVWVMLIVGIIVSAIVFGRL-LD---PFS--------PERLIQVIQGVALIALLLNLIALW-GQEPRRSRRAAAA- 190 (403)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHH-cc---ccC--------HHHHHHHHHHHHHHHHHHHHHHHH-hcccCCcccccCC-
Confidence 999999999889988876555431 11 111 122333333333333222233332 2243322211000
Q ss_pred CCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCCCCCCccchHHHHHHHhccCCHHHH
Q 012185 162 TDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMH 241 (469)
Q Consensus 162 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~mP~~l~ 241 (469)
. ++..++++-++.++.-|+. |
T Consensus 191 -------------------------------------------------~---------~~~~~f~~a~~~~~~~~~a-~ 211 (403)
T PF03209_consen 191 -------------------------------------------------E---------RPRPPFREAWRQVWASPQA-R 211 (403)
T ss_pred -------------------------------------------------C---------CCCccHHHHHHHHHhCCCh-h
Confidence 0 0123455555554444544 4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhH-HHHHHHHHHHHHHH-HHHHhHHHhhhhcCch
Q 012185 242 VVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVR-EGAFGLLLNSVVLG-VSSFLIEPMCRWIGSR 319 (469)
Q Consensus 242 ~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~-~G~~~l~i~~iv~~-i~s~i~~~l~~~ig~r 319 (469)
++.+.-++. .+-++.-|-+=| =|+|+--.=+. .|-.+ .+.|+.-. ++.. +.++ .+.+|.+.|
T Consensus 212 ~f~~fl~l~-----t~a~~~QD~iLE-Pygg~Vfgmsv-----~eTT~Lta~~~~G~--L~G~~~~g~---~l~~~~~~~ 275 (403)
T PF03209_consen 212 RFFVFLFLG-----TLAFFMQDVILE-PYGGEVFGMSV-----GETTRLTAFWGGGT--LLGMLLAGF---LLSRRLGKK 275 (403)
T ss_pred HHHHHHHHH-----HHHHHhhHHHcC-CchhHHcCCCH-----HHHHHHHHHHHHHH--HHHHHHHHH---HhcCCCCch
Confidence 433333333 333334343322 14332111000 01111 11111100 0111 1111 244678888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCCcc
Q 012185 320 LVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQG 399 (469)
Q Consensus 320 ~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G 399 (469)
++-..|..+.++|+..+.+..... +.+.......++|++.+.+..--.+++-+...++ ..|
T Consensus 276 ~~a~~G~~~~~~~f~lii~a~~~~-----------------~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~--~aG 336 (403)
T PF03209_consen 276 RTAALGCLLGALAFALIILAGPLG-----------------SPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAG--RAG 336 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcc-----------------cchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCc--chh
Confidence 877778877777766555443211 2334445556677777765554444555555443 689
Q ss_pred chhhHHHHHHHHHHHHHhhccccceec----ccCc----cchHHHHHHHHHHHHHHHh
Q 012185 400 LAIGVLNLAIVIPQMIVSLGAGPWDAL----FGGG----NIPAFVLASLSALAGGVVA 449 (469)
Q Consensus 400 ~~~gi~n~~i~l~Qil~s~~~g~l~~~----~g~~----~~~~f~~~~v~~liaai~~ 449 (469)
++||....+..+++-+..+..|.+.|. .+.+ +..+|.+-++..+++.+..
T Consensus 337 ~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 337 LFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999888876542 2311 2345666677666666533
No 72
>PRK03699 putative transporter; Provisional
Probab=99.33 E-value=7.6e-11 Score=121.68 Aligned_cols=270 Identities=13% Similarity=0.071 Sum_probs=158.8
Q ss_pred HhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHH
Q 012185 56 LDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVV 135 (469)
Q Consensus 56 lD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i 135 (469)
..++.........+++.|..|+++|+++.+......++|+.++..+... .. .+ ...||+.|.+.++
T Consensus 105 ~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~-----l~----~~-----~~gw~~~f~~~~~ 170 (394)
T PRK03699 105 LGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAY-----LL----AR-----SIEWYWVYACIGL 170 (394)
T ss_pred HHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHH-----HH----hc-----cccHHHHHHHHHH
Confidence 3344444455678899999999999999988877777877776544432 10 00 1268888887666
Q ss_pred HHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccC
Q 012185 136 FLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTN 215 (469)
Q Consensus 136 ~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (469)
+.++..++.+ .++.|..+.++++ +++
T Consensus 171 ~~~~~~~~~~--~~~~p~~~~~~~~---------------------------------------------------~~~- 196 (394)
T PRK03699 171 VYVAIFILTL--FSEFPALGKHAPK---------------------------------------------------ADK- 196 (394)
T ss_pred HHHHHHHHHH--hcCCccccccCcc---------------------------------------------------ccC-
Confidence 6544443322 2232311110000 000
Q ss_pred CCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHH
Q 012185 216 GSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGL 295 (469)
Q Consensus 216 ~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l 295 (469)
+ ..+.. ..+.++.+++..++..++.+.+..|.+.|+.| .++-++ .+.+ +..
T Consensus 197 ~----~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~g~s~---------~~~~-----~~~ 247 (394)
T PRK03699 197 P----VAKEK----------WGIGVLFLAIAALLYILAQLTFISWVPEYAQK-KFGMSL---------EDAG-----NLV 247 (394)
T ss_pred c----ccccc----------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCh---------HHhh-----HHH
Confidence 0 00000 12345555666666666677778888888866 344432 1111 223
Q ss_pred HHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccc
Q 012185 296 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFP 375 (469)
Q Consensus 296 ~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~ 375 (469)
..+.+...+..++.+++.||+++|++......+.++.+....... +.....+.....|+.
T Consensus 248 ~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~G~~ 307 (394)
T PRK03699 248 SNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTD--------------------DPSHLLYAILGLGFF 307 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcC--------------------CchHHHHHHHHHHHH
Confidence 344456677888899999999999988776655444332222111 122233344556766
Q ss_pred hhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHH
Q 012185 376 LAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGV 447 (469)
Q Consensus 376 ~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai 447 (469)
.+.......+...|..|++ .+...|..+.+..+.+++.+.+.|.+.+..|.. ..+.+.+++.+++.+
T Consensus 308 ~~~~~~~~~~~~~~~~~~~---~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~--~~~~~~~~~~~~~~~ 374 (394)
T PRK03699 308 SSAIYTTIITLGSQQTKVA---SPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQ--AALLTANGLYAVVFV 374 (394)
T ss_pred HHHHHHHHHHHHHHHccCC---CHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCch--hhhhhhHHHHHHHHH
Confidence 6655555555666666643 355678888888999999999999988877643 566666666666655
No 73
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.33 E-value=4.7e-11 Score=127.26 Aligned_cols=290 Identities=15% Similarity=0.064 Sum_probs=168.1
Q ss_pred HHhccccccchhHHHHHhcC-CCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHH
Q 012185 55 LLDLANNTVQGPARALLADL-SGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVA 133 (469)
Q Consensus 55 llD~a~n~~~~p~rAli~D~-~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~ 133 (469)
+.-++.........+.+.|. .|+++|++++++.....++|..+|..++... .. ...||+.|++.
T Consensus 103 l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l-----~~----------~~gwr~~f~i~ 167 (495)
T PRK14995 103 LLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGIL-----LE----------HFYWGSVFLIN 167 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----hc----------cCChHHHHHHH
Confidence 33444444444456666665 4789999999999999999999999888752 11 12689999998
Q ss_pred HHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccc--------cccCCCCCCCCCCCCCCccCCcccchhh-
Q 012185 134 VVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAI--------SKSKHDMPAAPNANGNKVESGHESDANL- 204 (469)
Q Consensus 134 ~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 204 (469)
..+.+++.++....+||+|..+ +++.| ....... ...+.. .+.......-.-.
T Consensus 168 ~~~~~~~~~l~~~~l~~~~~~~--~~~~d-------~~g~~~~~~~~~~l~~~~~~~---------~~~~~~~~~~~~~~ 229 (495)
T PRK14995 168 VPIVLVVMGLTARYVPRQAGRR--DQPLN-------LGHALMLIVAILLLVYSAKTA---------LKGFLSLWVTSLTL 229 (495)
T ss_pred HHHHHHHHHHHHHhCCCCCCCC--CCCCC-------hHhHHHHHHHHHHHHHHHHhc---------cccCCchHHHHHHH
Confidence 8777777777777788765221 11111 0000000 000000 0000000000000
Q ss_pred --------hhhhccccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCC
Q 012185 205 --------KHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKG 276 (469)
Q Consensus 205 --------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~ 276 (469)
.....+.+. ..+... .++++ .+.++..++..++..++++++.+|.+.|+.+ +++.++
T Consensus 230 ~~~~~~l~~f~~~e~~~------~~p~~~-~~lf~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~-v~g~s~-- 294 (495)
T PRK14995 230 LTGALLLGLFIRTQLAA------SRPMID-MRLFT-----HRIILSGVVMAMTAMITLVGFELLMAQELQF-VHGLSP-- 294 (495)
T ss_pred HHHHHHHHHHHHHHhcC------CCCCcC-HHHhC-----CcccHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCCH--
Confidence 000000000 001011 12222 1334555677777788888888899988765 444332
Q ss_pred CChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCC
Q 012185 277 NDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIG 356 (469)
Q Consensus 277 ~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (469)
.+. | ..+..+++...+.+.+.+++.||+|+|++...+.++.++++..+.+... .+
T Consensus 295 -------~~a----g-~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~~~--~~----------- 349 (495)
T PRK14995 295 -------LEA----G-MFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMTDF--ST----------- 349 (495)
T ss_pred -------HHH----H-HHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHhcC--CC-----------
Confidence 122 2 3445566778888999999999999999888888777766554443321 00
Q ss_pred CchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccc
Q 012185 357 ANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPW 423 (469)
Q Consensus 357 ~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l 423 (469)
..+.......+.|++.+.........+.+..|++ ..|...|+.|.+..+.+.+...+.|.+
T Consensus 350 ----~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~--~~g~~~~~~~~~~~lG~~~G~ai~g~i 410 (495)
T PRK14995 350 ----QQWQAWGLMALLGFSAASALLASTSAIMAAAPPE--KAAAAGAIETMAYELGAGLGIAIFGLL 410 (495)
T ss_pred ----chHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHH--hcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1233445666778888876665566666777765 677789999998888887766555554
No 74
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.33 E-value=9.3e-11 Score=120.58 Aligned_cols=270 Identities=13% Similarity=0.001 Sum_probs=177.6
Q ss_pred HhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHH
Q 012185 56 LDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVV 135 (469)
Q Consensus 56 lD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i 135 (469)
.....+.......++..|. +++|+++.+......++|.++|-.+++.. .+. ..||..|.+.++
T Consensus 104 ~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l--~~~-------------~g~~~~f~~~~~ 166 (382)
T TIGR00902 104 FALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGL--IGM-------------FDEQNILAILTA 166 (382)
T ss_pred HHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHH--HHH-------------cChhHHHHHHHH
Confidence 4444555556677776653 57889999999999999999988776542 111 146667766655
Q ss_pred HHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccC
Q 012185 136 FLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTN 215 (469)
Q Consensus 136 ~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (469)
...+.++ .. ..+|++.++ ++++. +
T Consensus 167 ~~~~~~~-~~-~~~~~~~~~-~~~~~--------------------------------------------------~--- 190 (382)
T TIGR00902 167 GLAFMLI-GF-LIKPTIPPK-DAIPE--------------------------------------------------D--- 190 (382)
T ss_pred HHHHHHH-HH-HcCCCCCCC-ccccc--------------------------------------------------c---
Confidence 4333322 22 334432111 00000 0
Q ss_pred CCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHH
Q 012185 216 GSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGL 295 (469)
Q Consensus 216 ~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l 295 (469)
+ .+....++++++ .|.++.+.+..++.+.++..+..|.+.|+.| ++.++ . ..| +..
T Consensus 191 ~---~~~~~~~~~~l~-----~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~--~g~s~-----------~--~~g-~l~ 246 (382)
T TIGR00902 191 E---SQGDSAFIALLK-----NPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA--AGISA-----------S--ATG-LLW 246 (382)
T ss_pred c---cccchhHHHHHc-----ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--CCCCH-----------h--HHH-HHH
Confidence 0 001112333333 2567777888888888888888898988865 33321 1 122 233
Q ss_pred HHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccc
Q 012185 296 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFP 375 (469)
Q Consensus 296 ~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~ 375 (469)
.+..+...+...+.+++.||+|.|++..++.+..++......+.. +.+..+....+.|+.
T Consensus 247 ~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~q~l~g~~ 306 (382)
T TIGR00902 247 GIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIE--------------------AFPLIFLLQILHCGT 306 (382)
T ss_pred HHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHh--------------------hHHHHHHHHHHHHHH
Confidence 345666777778889999999999999999988888776655443 356667778888999
Q ss_pred hhhhccccchhhhccccCCCCCccchhhHHH-HHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHH
Q 012185 376 LAITYSVPFAITAELTADSGGGQGLAIGVLN-LAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVV 448 (469)
Q Consensus 376 ~a~~~~vP~aLise~~p~~~~~~G~~~gi~n-~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~ 448 (469)
++........++.+. |++ .+++..|++| ....+...+.++..|.+.+..|. ..|.+.++.++++.+.
T Consensus 307 ~~~~~~~~~~~i~~~-~~~--~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~---~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 307 FAVCHLAAMRYIAAQ-PGS--EIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA---GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHhC-CHh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHH
Confidence 998888877788876 654 5688899987 46678888889999998887762 4677788878877653
No 75
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.31 E-value=1e-10 Score=120.55 Aligned_cols=131 Identities=11% Similarity=0.103 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccch
Q 012185 297 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPL 376 (469)
Q Consensus 297 i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~ 376 (469)
+.+++..+.....+++.||+|+|++..++.+++++.+....+.. +.+..++...+.|++.
T Consensus 262 ~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~--------------------~~~~~~~~~~l~g~~~ 321 (396)
T TIGR00882 262 MGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFAT--------------------TALEVVILKMLHAFEV 321 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcC--------------------ChHHHHHHHHHHHHHH
Confidence 34566677778889999999999999888887776554333221 1333444555667666
Q ss_pred hhhccccchhhhccccCCCCCccchhhH-HHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhh
Q 012185 377 AITYSVPFAITAELTADSGGGQGLAIGV-LNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATL 451 (469)
Q Consensus 377 a~~~~vP~aLise~~p~~~~~~G~~~gi-~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~ 451 (469)
......-...+.+..+. |..++..+. .|....+.+++.+...|.+.+..|- ...|.+.+++.++.++...+
T Consensus 322 ~~~~~~~~~~~~~~~~~--~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~--~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 322 PFLLVGCFKYITSQFDV--RLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGF--QGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHHHHHHHHHHHhCCc--ceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhccc--HHHHHHHHHHHHHHHHHHHH
Confidence 54444333344444444 356666666 7888899999999999999887763 46788888888887775544
No 76
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.31 E-value=1.3e-10 Score=121.39 Aligned_cols=195 Identities=8% Similarity=-0.040 Sum_probs=129.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCch
Q 012185 240 MHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSR 319 (469)
Q Consensus 240 l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r 319 (469)
++.+.+..++...+......|.+.|+.+ ++.++.. .-+-+.........+..+...+..++.+++.||+|+|
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~------~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r 281 (418)
T TIGR00889 210 MAIFFFFSMLLGAPLQITNIFGNGFLHE--FGRNPEF------ADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIK 281 (418)
T ss_pred eeeHHHHHHHHHhHHHHHHHhHHHHHHH--hcccccc------cchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcH
Confidence 4445555555555554455666666654 2222210 0000112222444556667777788899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCCcc
Q 012185 320 LVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQG 399 (469)
Q Consensus 320 ~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G 399 (469)
+++.++.++.++++....... + +..+.+..++...+.|++++........+++|..|++ .+|
T Consensus 282 ~~l~~~~~~~~v~~~l~~~~~----~------------~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~--~~g 343 (418)
T TIGR00889 282 KVMLLSLVAWALRFGFFAYGD----P------------EYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVH--IRA 343 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHcC----c------------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH--HHH
Confidence 999999888877654443321 0 0112344455666788888776666667889999975 688
Q ss_pred chhhHHH-HHHHHHHHHHhhccccceecccC----ccchHHHHHHHHHHHHHHHhhhcccCCCCCC
Q 012185 400 LAIGVLN-LAIVIPQMIVSLGAGPWDALFGG----GNIPAFVLASLSALAGGVVATLKLPHLSSNS 460 (469)
Q Consensus 400 ~~~gi~n-~~i~l~Qil~s~~~g~l~~~~g~----~~~~~f~~~~v~~liaai~~~~~vpet~g~~ 460 (469)
+.+|+.+ ....+..++.+...|.+.+..|+ +...+|.+.+++.+++++...+++||+++..
T Consensus 344 ~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~~~~~ 409 (418)
T TIGR00889 344 SAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYSHNAI 409 (418)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 8999998 55678999999999988887653 2236788888888989888888899887653
No 77
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.31 E-value=3.8e-11 Score=124.89 Aligned_cols=143 Identities=11% Similarity=0.026 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhc
Q 012185 294 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLG 373 (469)
Q Consensus 294 ~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 373 (469)
...++.+...+..++.+++.||+|+|+....+.++.++++....+.. +.+..++...+.|
T Consensus 267 ~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~--------------------~~~~~~~~~~l~g 326 (420)
T PRK09528 267 LNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFAT--------------------GPLEVSILKLLHA 326 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcc--------------------cHHHHHHHHHHHH
Confidence 33445566677788999999999999998888888777665544432 1334445555667
Q ss_pred cchhhhccccchhhhccccCCCCCccchhhH-HHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhc
Q 012185 374 FPLAITYSVPFAITAELTADSGGGQGLAIGV-LNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLK 452 (469)
Q Consensus 374 i~~a~~~~vP~aLise~~p~~~~~~G~~~gi-~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~ 452 (469)
+..+......+..+.|..|++ .+++..++ .|....++.++.+...|.+.+..|. ...|.+.+++.+++.++..+.
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~--~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~--~~~f~~~~~~~~i~~~~~~~~ 402 (420)
T PRK09528 327 FEVPFLLVGVFKYITLNFDVR--LSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGF--QGTYLILGGIVLLFTLISVFT 402 (420)
T ss_pred HHHHHHHHHHHHHHHHHcCcc--ceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCc--hHHHHHHHHHHHHHHHHHHHH
Confidence 777666555567778888765 45655555 7888889999999999998887763 467887777777777666666
Q ss_pred ccCCCCCC
Q 012185 453 LPHLSSNS 460 (469)
Q Consensus 453 vpet~g~~ 460 (469)
.++.+.++
T Consensus 403 ~~~~~~~~ 410 (420)
T PRK09528 403 LSGDRELS 410 (420)
T ss_pred hcCCchhh
Confidence 66655544
No 78
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.31 E-value=1.4e-10 Score=119.25 Aligned_cols=272 Identities=13% Similarity=0.046 Sum_probs=165.0
Q ss_pred hccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHH
Q 012185 57 DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVF 136 (469)
Q Consensus 57 D~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~ 136 (469)
.++.+..+....+++.|. +++|+++.+..+.+.++|..+|-.+++.. .+. -.||..|.+.++.
T Consensus 105 g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l--~~~-------------~g~~~~f~~~~~~ 167 (382)
T PRK11128 105 NLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKL--VSW-------------FGEQAILWILTAG 167 (382)
T ss_pred HHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHH--HHH-------------cChhHHHHHHHHH
Confidence 344455666677888886 56788889999989899999988888752 111 1467777776655
Q ss_pred HHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCC
Q 012185 137 LTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNG 216 (469)
Q Consensus 137 ~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (469)
.++..+. .+..||++... +++ ++ +
T Consensus 168 ~~~~~~~-~~~~~~~~~~~--~~~---------------------------------------------------~~--~ 191 (382)
T PRK11128 168 VASMLLG-QLLRPTIMPQG--ESR---------------------------------------------------QQ--E 191 (382)
T ss_pred HHHHHHH-HHccCCCCCcc--ccc---------------------------------------------------cc--c
Confidence 5444332 23344432110 000 00 0
Q ss_pred CCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHH
Q 012185 217 SFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLL 296 (469)
Q Consensus 217 ~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~ 296 (469)
+.....+++++++ |.++.+++..++.+.+...+..|.+.|+.| ++.++ .+ .| ....
T Consensus 192 ---~~~~~~~~~i~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~g~s~---------~~----~g-~~~~ 247 (382)
T PRK11128 192 ---SAGWPAWKALLKE-----PTVWRFLLCVSLLQGSHAAYYGFSAIYWQA--AGYSA---------ST----IG-YLWS 247 (382)
T ss_pred ---ccccchHHHHHcC-----hhHHHHHHHHHHHHHHhHhHHHHHHHHHHH--CCCCH---------hH----HH-HHHH
Confidence 0012234555543 456766776777667766677777777754 33221 11 22 1222
Q ss_pred HHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccch
Q 012185 297 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPL 376 (469)
Q Consensus 297 i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~ 376 (469)
+..+...+..++.+++.||+|+|+...++.+..+++++...+.. +.+..++...+.|+++
T Consensus 248 ~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~l~g~~~ 307 (382)
T PRK11128 248 LGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTT--------------------ALPWLIVIQILHCGTF 307 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhh--------------------hHHHHHHHHHHHHHHH
Confidence 44556677778889999999999998888888777665444332 2455566677778877
Q ss_pred hhhccccchhhhccccCCCCCccchhhHHH-HHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhh
Q 012185 377 AITYSVPFAITAELTADSGGGQGLAIGVLN-LAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATL 451 (469)
Q Consensus 377 a~~~~vP~aLise~~p~~~~~~G~~~gi~n-~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~ 451 (469)
+.....=...+.+. +++ ++|+.+++.+ ....+.+.+.+.+.|.+.+..|. ..+...+++++++.+....
T Consensus 308 ~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~---~~~~~~~~~~~~~~~~~~~ 377 (382)
T PRK11128 308 TVCHLAAMRYIAAR-PGS--EVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA---GVFWVMALVALPALFIRPK 377 (382)
T ss_pred HHHHHHHHHHHHHC-CHh--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHH
Confidence 76544322333443 332 4577888887 55567777888889998888763 3577777777766554333
No 79
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.26 E-value=3.3e-10 Score=120.23 Aligned_cols=283 Identities=11% Similarity=0.071 Sum_probs=144.9
Q ss_pred hhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHHhhhe
Q 012185 65 GPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVT 144 (469)
Q Consensus 65 ~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~~~it 144 (469)
.|...++.|..|+++|++++++......+|..++..+.... ....... .......||+.|.+.+++.+++.++.
T Consensus 142 ~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i-----~~~~~~~-~~~~~~gWr~~f~i~g~l~l~~~l~~ 215 (476)
T PLN00028 142 VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLV-----FPLIKDA-GAPSFTAWRIAFFVPGLLHIIMGILV 215 (476)
T ss_pred HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHhc-CCcchhhhHHHHHHHHHHHHHHHHHH
Confidence 45677899999999999999999887777777765444221 0000000 00001269999998777766555544
Q ss_pred eEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCCCCCCccc
Q 012185 145 IYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGA 224 (469)
Q Consensus 145 ~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (469)
.+..+|+|....+ +. +. ..+ ..+.
T Consensus 216 ~~~~~~~p~~~~~--~~----------~~------------------------------------~~~--------~~~~ 239 (476)
T PLN00028 216 LTLGQDLPDGNYR--EL----------KK------------------------------------SGT--------MPKD 239 (476)
T ss_pred HHHcCcCCCCchh--hH----------Hh------------------------------------cCc--------cccc
Confidence 4444443311000 00 00 000 0000
Q ss_pred hHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHH
Q 012185 225 VLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGV 304 (469)
Q Consensus 225 ~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i 304 (469)
...+.++...+.|+ .+.+++..++.+...+.+..+.+.|+.+ .++-+ .. ..+ ....++++...+
T Consensus 240 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~g~s------------~~-~a~-~~~~~~~~~~~i 303 (476)
T PLN00028 240 SFSKVLRYGVTNYR-TWILALTYGYSFGVELTMDNIIAEYFYD-RFGLS------------LE-TAG-AIAASFGLMNLF 303 (476)
T ss_pred cHHHHHHHHHcCch-hHHHHHHHHHHHHHHHHHHhHHHHHHHH-hcCCC------------HH-HHH-HHHHHHHHHHHH
Confidence 11122222222233 4555555555555445555556666544 22322 11 122 334456677888
Q ss_pred HHHhHHHhhhhcCch-----HHHH--HHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchh
Q 012185 305 SSFLIEPMCRWIGSR-----LVWA--ISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLA 377 (469)
Q Consensus 305 ~s~i~~~l~~~ig~r-----~l~~--~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a 377 (469)
..++.+++.||++|| +.++ +..++.++++...... + +....++.+.++++..+
T Consensus 304 g~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~-----~---------------~~~~~~~~~~l~~~~~~ 363 (476)
T PLN00028 304 ARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRA-----N---------------SLGAAIVVMILFSIFVQ 363 (476)
T ss_pred HHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhccc-----c---------------hHHHHHHHHHHHHHHHH
Confidence 888999999999865 2222 2222222211111111 0 12222333333444433
Q ss_pred hhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhh
Q 012185 378 ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATL 451 (469)
Q Consensus 378 ~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~ 451 (469)
.....-++++.+..|+ ..|+..|+.|....+..++.+...+ .+..++ ....|.+.+++.++++++.++
T Consensus 364 ~~~~~~~~~~~~~~~~---~~g~~~g~~~~~g~lg~~i~~~l~~--~~~~~~-y~~~f~~~~~~~~i~~~~~~~ 431 (476)
T PLN00028 364 AACGATFGIVPFVSRR---SLGVISGLTGAGGNVGAVLTQLLFF--TGSSYS-TETGISLMGVMIIACTLPVAF 431 (476)
T ss_pred HhhhhhcccCcccChh---hchhhhhhhhccccHHHHHHHHHHH--hcCCcc-HhhHHHHHHHHHHHHHHHHHh
Confidence 3334444566666553 5788899998887777777665433 111222 346788888888888875543
No 80
>PRK11043 putative transporter; Provisional
Probab=99.25 E-value=1.4e-09 Score=112.09 Aligned_cols=251 Identities=14% Similarity=0.082 Sum_probs=141.1
Q ss_pred ccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHH
Q 012185 58 LANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFL 137 (469)
Q Consensus 58 ~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~ 137 (469)
++.........+++.|..|++++++..+......++|..+|..++... .. ...||..|.+..++.
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l-----~~----------~~g~~~~~~~~~~~~ 170 (401)
T PRK11043 106 VGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWL-----LN----------HFGWQAIFATLFAIT 170 (401)
T ss_pred hhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----Hh----------cCChHHHHHHHHHHH
Confidence 333334445678899999999999999888888888888888777541 10 125788887776666
Q ss_pred HHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCC
Q 012185 138 TLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGS 217 (469)
Q Consensus 138 ~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (469)
++..++.. ..+|++.... ++
T Consensus 171 ~~~~~~~~-~~~~~~~~~~--~~--------------------------------------------------------- 190 (401)
T PRK11043 171 LLLILPTL-RLKPSKKARK--QS--------------------------------------------------------- 190 (401)
T ss_pred HHHHHHHH-HcCCCCCccc--cc---------------------------------------------------------
Confidence 55544433 3444331100 00
Q ss_pred CCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHH
Q 012185 218 FNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLL 297 (469)
Q Consensus 218 ~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i 297 (469)
+.+..++++++. | ..+...+...+.-.+++.+..+.+.++.+ ++.++ -+ .| +....
T Consensus 191 ---~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~g~s~---------~~----~g-~~~~~ 246 (401)
T PRK11043 191 ---QDALTFKQLLKS----K-TYLGNVLIFAACSAAFFAWLTGSPFILEQ--MGYSP---------AD----IG-LSYVP 246 (401)
T ss_pred ---hHHHHHHHHHcC----h-hHHHHHHHHHHHHHHHHHHHHHhHHHHHH--cCCCH---------HH----HH-HHHHH
Confidence 001123333332 2 23322222222223344444555555543 33221 01 12 23344
Q ss_pred HHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchh
Q 012185 298 NSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLA 377 (469)
Q Consensus 298 ~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a 377 (469)
+.+...+.+++..++.||+++|+......+..+++.....+......+ ..+..++...+.|+..+
T Consensus 247 ~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~ 311 (401)
T PRK11043 247 QTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLLSHP---------------SLVPLLIPFCVMAAANG 311 (401)
T ss_pred HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHhccC---------------cHHHHHHHHHHHHHHHH
Confidence 555666777788899999999987766666655554433332211000 13334445566777777
Q ss_pred hhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhcccccee
Q 012185 378 ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDA 425 (469)
Q Consensus 378 ~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~ 425 (469)
....+-.+...|..|+ .+|..+|+.|......-.+.+...|.+.+
T Consensus 312 ~~~~~~~~~~~~~~~~---~~g~~~g~~~~~~~~~~~~~~~~~g~l~~ 356 (401)
T PRK11043 312 AIYPIVVAQALRPFPQ---ATGKAAALQNTLQLGLCFLASLLVSALIS 356 (401)
T ss_pred HHHHHHHHHHhhhCcc---cChHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 7666655555555553 57888999998877676777777776655
No 81
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.24 E-value=1e-09 Score=112.66 Aligned_cols=129 Identities=13% Similarity=0.060 Sum_probs=86.7
Q ss_pred HHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhcc
Q 012185 295 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGF 374 (469)
Q Consensus 295 l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi 374 (469)
..++.+...+.++..+++.||+|+|++...+.++.+++.+... ... ... ....+.|+
T Consensus 241 ~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~~~------------------~~~---~~~~l~g~ 297 (381)
T PRK03633 241 MALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--SQA------------------AMA---PALFILGA 297 (381)
T ss_pred HHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--hhH------------------HHH---HHHHHHHH
Confidence 3455567778888899999999999998888777766543222 100 011 12223344
Q ss_pred chhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhh
Q 012185 375 PLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVAT 450 (469)
Q Consensus 375 ~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~ 450 (469)
+.......-.+++.|..|++ ..+...+..+....+++.+.+...|.+.+..|. .+.|.+.+.+.+++.++.+
T Consensus 298 ~~~~~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~--~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 298 AGFTLYPVAMAWACEKVEHH--ELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSD--NLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred HHHhHHHHHHHHHHccCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc--cHHHHHHHHHHHHHHHHHH
Confidence 33334444445667777654 456678888999899999999999988877763 3678888888877766433
No 82
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.21 E-value=8.8e-10 Score=113.42 Aligned_cols=178 Identities=11% Similarity=-0.022 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHH-HHHHHHHhHHHhhhhcC
Q 012185 239 AMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSV-VLGVSSFLIEPMCRWIG 317 (469)
Q Consensus 239 ~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~i-v~~i~s~i~~~l~~~ig 317 (469)
.++.++...++...+...+.-|.+.|+.|. +-++ + ..| +...+..+ ...+..++.+++.||+|
T Consensus 209 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~--G~s~-----------~--~ig-~~~~~~~~~~~~~g~~~~g~l~~r~g 272 (390)
T TIGR02718 209 LAWSLLALALLSAMTAVSGFGLSKLYLVDA--GWPL-----------E--WIG-RLGMAGGAVTVLLGCGGGAWLVRRAG 272 (390)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhHHHHhc--CCCH-----------H--HHH-HHHhHHHHHHHHHHHHHHHHHHHHhh
Confidence 356666666666666666666777777652 2221 1 122 12222222 33445678899999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCC
Q 012185 318 SRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGG 397 (469)
Q Consensus 318 ~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~ 397 (469)
+|++...+.++.++............ . . + .....+....+.++..+.....-++.+.++.+++ +.
T Consensus 273 ~~~~l~~~~~~~~~~~~~~~~~~~~~-~----------~-~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~ 337 (390)
T TIGR02718 273 LWRTFILGVGLAGSLALLWFAQAAFW-L----------A-P--GIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDG-DQ 337 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcc-c----------C-C--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-cc
Confidence 99998877665533222111111000 0 0 0 1222223333334444444444444556666542 46
Q ss_pred ccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHh
Q 012185 398 QGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVA 449 (469)
Q Consensus 398 ~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~ 449 (469)
.|+++++.|....+..++.+...|.+.+..|. ...|.+++++++++.+..
T Consensus 338 ~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~--~~~f~~~~~~~l~a~~~~ 387 (390)
T TIGR02718 338 AGTDVTAVQSTRDLGELIASSIAGYLTDRFGY--AGGFLSGTVLAVLAILLA 387 (390)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc--HHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999999998887763 367888888888776643
No 83
>PRK10133 L-fucose transporter; Provisional
Probab=99.17 E-value=2.4e-09 Score=112.44 Aligned_cols=298 Identities=13% Similarity=0.093 Sum_probs=162.8
Q ss_pred HHHHHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccc--h-hh----hhhccc-c---h
Q 012185 49 FVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGS--W-HR----WFPFLT-S---R 117 (469)
Q Consensus 49 ~v~g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~--w-~~----~~~~~~-~---~ 117 (469)
..++..+.-++....+....+++.|..|+++|.+..+..+...++|..+|.++|...- + +. ....+. + .
T Consensus 120 ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~ 199 (438)
T PRK10133 120 FLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSA 199 (438)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHH
Confidence 3445566677888888889999999877777776788888888999999988875310 0 00 000000 0 0
Q ss_pred hhhcccchhHHHHHH-HHHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccC
Q 012185 118 ACCAACGNLKAAFLV-AVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVES 196 (469)
Q Consensus 118 ~~~~~~~~~~~~f~i-~~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (469)
+......+||..|.. ..+..++.+++.....||.+. ++.+ +
T Consensus 200 w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~---~~~~-~---------------------------------- 241 (438)
T PRK10133 200 YKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQS---DNHS-D---------------------------------- 241 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc---cccc-c----------------------------------
Confidence 000011357777753 333333333332333343211 0000 0
Q ss_pred CcccchhhhhhhccccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCC
Q 012185 197 GHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKG 276 (469)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~ 276 (469)
.+ + .......+++++ .|+ ++...+..++...+......|.+.|+-++.++-++
T Consensus 242 --------------~~---~---~~~~~~~~~ll~----~~~-~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~-- 294 (438)
T PRK10133 242 --------------AK---Q---GSFSASLSRLAR----IRH-WRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTA-- 294 (438)
T ss_pred --------------cc---c---cchhhhHHHHHh----Cch-HHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCH--
Confidence 00 0 000112233333 232 33333444444455555555666664333344322
Q ss_pred CChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCC
Q 012185 277 NDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIG 356 (469)
Q Consensus 277 ~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (469)
....+.+..+.+...+.+++.+++.||+|+|++...+.++.+++++...+..
T Consensus 295 ------------~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~---------------- 346 (438)
T PRK10133 295 ------------GFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAG---------------- 346 (438)
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcC----------------
Confidence 1223556677778888899999999999999988887666554443322211
Q ss_pred CchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHH
Q 012185 357 ANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFV 436 (469)
Q Consensus 357 ~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~ 436 (469)
+. ..+..+.++|++.+.....=+++..+..|++ .|...++.++.. +...+.+.+.|.+.+..|+ -...|.
T Consensus 347 ----~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~---~~~as~l~~~~~-~g~~~~~~i~G~l~~~~g~-~~~~~~ 416 (438)
T PRK10133 347 ----GH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQD---TKYGSSFIVMTI-IGGGIVTPVMGFVSDAAGN-IPTAEL 416 (438)
T ss_pred ----Ch-HHHHHHHHHHHHHHHHHHHHHHHHHcccchh---hccchhHHhHHh-ccchHHHHHHHHHHHhccc-hHHHHH
Confidence 01 1244566788888888888777888877653 466677776544 4455666666666666552 124555
Q ss_pred HHHHHHHHHHHHh
Q 012185 437 LASLSALAGGVVA 449 (469)
Q Consensus 437 ~~~v~~liaai~~ 449 (469)
+-.++.+...++.
T Consensus 417 v~~~~~~~~~~~~ 429 (438)
T PRK10133 417 IPALCFAVIFIFA 429 (438)
T ss_pred HHHHHHHHHHHHH
Confidence 5555444444433
No 84
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.17 E-value=9.4e-10 Score=115.99 Aligned_cols=325 Identities=15% Similarity=0.185 Sum_probs=204.3
Q ss_pred ehhHHHHHHHHHhhcchhhHhhhcCCCcccccccCCCccchhhHHHHHHHHHhccccccchhHHHHHhcCCCccchhhHH
Q 012185 5 VRKKTAIYSCRMSDDFCCYIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSAN 84 (469)
Q Consensus 5 ~~g~~~~~i~llll~~~~~i~~~l~d~~~~~~~~~~~~~~~i~~~v~g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~ 84 (469)
..+.++.+++-+++|++...+.+. .++.=++..++..+.......++.--+|+++|++..
T Consensus 107 ~~~~~~sa~~t~l~P~aa~~~~~~--------------------~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~Ers~~~ 166 (466)
T KOG2532|consen 107 FISGLISALLTLLTPLAASIGFYL--------------------LLVLRFLQGLGQGVLFPAIGSILAKWAPPNERSTFI 166 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchh--------------------hHHHHHHhHHHHhHHHhhhhceeeeECCHHHHHHHH
Confidence 346667777888888887665431 233344455666777778888999999999999999
Q ss_pred HHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHHhhheeEEeeccCCCCCCCCCCCCC
Q 012185 85 AIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDS 164 (469)
Q Consensus 85 ~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~ 164 (469)
++.....-+|.+++..+++.+ -+. .-.|+..|++-.++-++..++..++..|+|.....-.
T Consensus 167 ail~~g~q~g~v~~mp~sg~l--c~s------------~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~is----- 227 (466)
T KOG2532|consen 167 AILTAGSQLGTIITMPVSGLL--CES------------SLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPNIS----- 227 (466)
T ss_pred HHHHHHHHHHHHHHHHhHHHH--hcc------------CCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCCCCC-----
Confidence 999998889999988665541 000 1258889999888877777777888888875321110
Q ss_pred CCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCCCCCCccchHHHHHHHhccCCHHHHHHH
Q 012185 165 APLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVL 244 (469)
Q Consensus 165 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~ 244 (469)
+.|.+.|++...++ + .++.....+++++++ +++|-++
T Consensus 228 ------------------------------------~~El~~I~~~k~~~-~-~~~~~~vP~~~i~ts-----~~vwai~ 264 (466)
T KOG2532|consen 228 ------------------------------------EKELKYIEKGKSEA-H-VKKKPPVPYKAILTS-----PPVWAIW 264 (466)
T ss_pred ------------------------------------HHHHHHHHhccccc-c-cCCCCCCCHHHHHcC-----HHHHHHH
Confidence 11111111100000 0 001134578888886 5899999
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC-------
Q 012185 245 IVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG------- 317 (469)
Q Consensus 245 ~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig------- 317 (469)
+.+|..-.+++.++.|.++|+.| |.+-|-+ +.|. ..++-.+ ...+..++.+.+.||+.
T Consensus 265 ~~~f~~~~~~~~l~~y~PtY~~~-VL~f~v~---------~~G~-~salP~l----~~~~~k~~~g~lsD~l~~~~ls~t 329 (466)
T KOG2532|consen 265 ISAFGGNWGFYLLLTYLPTYLKE-VLGFDVR---------ETGF-LSALPFL----AMAIVKFVAGQLSDRLTFRILSET 329 (466)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHH-HhCCChh---------hhhH-HHHHHHH----HHHHHHHHHHHHHHHHhhccCchH
Confidence 99999999999999999999998 5554421 2222 2333333 34444455555555542
Q ss_pred --chHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCC
Q 012185 318 --SRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSG 395 (469)
Q Consensus 318 --~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~ 395 (469)
||..-.++....+++++.++++... + .+.......+.+++.|...+- |..-...+. .
T Consensus 330 ~~rkifn~i~~~~~ai~l~~l~~~~~~--~------------~~~a~~~l~~~~~~~g~~~~G-----f~~~~~~~a--p 388 (466)
T KOG2532|consen 330 TVRKIFNTIAFGGPAVFLLVLAFTSDE--H------------RLLAVILLTIAIGLSGFNISG-----FYKNHQDIA--P 388 (466)
T ss_pred hHHHHHHhHHHHHHHHHHHeeeecCCC--c------------chHHHHHHHHHHHHcccchhh-----hHhhhhhcc--c
Confidence 2333446777777777766666410 0 011222233333444433332 223333322 2
Q ss_pred CCccchhhHHHHHHHHHHHHHhhccccceeccc--CccchHHHHHHHHHHHHHHH
Q 012185 396 GGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFG--GGNIPAFVLASLSALAGGVV 448 (469)
Q Consensus 396 ~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g--~~~~~~f~~~~v~~liaai~ 448 (469)
+..|..||+.|...++++++.+.+.|.+.+ -+ .+...+|.+.++..+++.++
T Consensus 389 q~a~~l~g~~~~~~~~~~~~~P~~vg~~~~-~~t~~eW~~VF~i~a~i~~~~~i~ 442 (466)
T KOG2532|consen 389 QHAGFVMGIINFVGALAGFIAPLLVGIIVT-DNTREEWRIVFLIAAGILIVGNII 442 (466)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHheeeEeC-CCCHHHHHHHHHHHHHHHHHhchh
Confidence 468999999999999999999999999885 22 12356688888888888763
No 85
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.16 E-value=6.7e-10 Score=118.99 Aligned_cols=323 Identities=15% Similarity=0.165 Sum_probs=181.8
Q ss_pred HHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHH
Q 012185 54 WLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVA 133 (469)
Q Consensus 54 ~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~ 133 (469)
++.-++........-.+++|+.++++|+.+..+ ......|+..+...+++ + ..+||+.+.+.
T Consensus 179 fl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~-----~------------~~~Wr~~~~~~ 240 (521)
T KOG0255|consen 179 FLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAY-----I------------TRDWRWLFWII 240 (521)
T ss_pred HHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHH-----H------------HhhHHHHHHHH
Confidence 345677788888899999999999999999999 66666666666655554 1 12789999998
Q ss_pred HHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccc
Q 012185 134 VVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAED 213 (469)
Q Consensus 134 ~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (469)
.++..+.+++ .+..||+|+|...+++.+++.+.+++..+ .|.. +...+...+.....+..+.
T Consensus 241 ~~~~~~~~~~-~~l~~Es~rwl~~~g~~~~a~~~l~~~a~-----~n~~------------~~~~~~~~~~~~~~~~~~~ 302 (521)
T KOG0255|consen 241 SIPSGLFLLL-WFLPPESPRWLLSKGRIDEAIKILKKIAK-----LNGR------------KLSVKELLRLELLLRPLKL 302 (521)
T ss_pred HHHHHHHHHH-HHccCcChHHHHHcCchHHHHHHHHHHHh-----hcCC------------CCCcHHHHHHHHHhhHhhh
Confidence 8888766665 55566999999888775554433322111 0000 0000000000000000000
Q ss_pred cCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHH
Q 012185 214 TNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAF 293 (469)
Q Consensus 214 ~~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~ 293 (469)
. ...+...+..+++. |+ +++..+...+.|+. +.+.+|...+..+ .+++| .| .
T Consensus 303 --~--~~~~~~~~~~l~~~----~~-l~~~~~~~~~~~~~-~~~~y~gl~~~~~-~lg~~---------~~---~----- 354 (521)
T KOG0255|consen 303 --L--FTEPKISFLDLFRT----PR-LRYRTLYLLFIWFV-FSLVYYGLSLNVS-GLGGN---------IY---L----- 354 (521)
T ss_pred --h--ccCCCCchhhhhcC----HH-HHHHHHHHHHHHHH-HhHHHHhhhhhhh-hcCch---------HH---H-----
Confidence 0 00112334444443 33 55555555555522 3334444433332 12222 11 1
Q ss_pred HHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhc
Q 012185 294 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLG 373 (469)
Q Consensus 294 ~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 373 (469)
...+++.+....-+..+...+++|||.....++++.+++++..++..... .......+..+...+
T Consensus 355 ~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~ 419 (521)
T KOG0255|consen 355 NFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDL---------------GGWLHWILPLLGKFF 419 (521)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccc---------------hhHHHHHHHHHHHHH
Confidence 11112223333344446888999999999999999998888777665210 000122333333333
Q ss_pred cchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcc
Q 012185 374 FPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKL 453 (469)
Q Consensus 374 i~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~v 453 (469)
++.+-. .+ |...+|++|.. -++...|..++...+..++++........ .. ....+...+..+.++++.+..++
T Consensus 420 ~~~~~~-~~-~~~~~el~pt~--~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~--~~~~~~~~~~~~~l~~~~~~~~l 492 (521)
T KOG0255|consen 420 IGSAFN-LI-FLYSAELIPTV--VRNTAVGAISAAARLGSILAPLFPLLLRQ-MF--PLLGLILFGWLALLLGLLSLLLL 492 (521)
T ss_pred HHHHHH-HH-HHHHHhhccHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hc--ccchHHHHHHHHHHHHHHHHhcC
Confidence 333322 22 66889999987 45666888888888888887765432222 11 11223335666667777687999
Q ss_pred cCCCCCCcc
Q 012185 454 PHLSSNSFR 462 (469)
Q Consensus 454 pet~g~~~~ 462 (469)
|||+++...
T Consensus 493 pet~~~~l~ 501 (521)
T KOG0255|consen 493 PETKGKPLP 501 (521)
T ss_pred cccCCCCCc
Confidence 999998764
No 86
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.15 E-value=8.2e-09 Score=107.54 Aligned_cols=75 Identities=17% Similarity=0.127 Sum_probs=56.5
Q ss_pred cchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHHhh
Q 012185 63 VQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCAL 142 (469)
Q Consensus 63 ~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~~~ 142 (469)
......+++.|..|+++|+++.++......+|..+|..+|... .+ ...||+.|.+.++..+++.+
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l--~~-------------~~gw~~~f~~~~~~~~i~~~ 185 (413)
T PRK15403 121 IATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAAL--MH-------------FVHWKVLFAIIAVMGLIAFV 185 (413)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH-------------hcCHHHHHHHHHHHHHHHHH
Confidence 3445678899999999999999999999999999998888642 11 12588999887777666655
Q ss_pred heeEEeeccC
Q 012185 143 VTIYFADEVP 152 (469)
Q Consensus 143 it~~~v~E~p 152 (469)
...+..||++
T Consensus 186 ~~~~~lp~~~ 195 (413)
T PRK15403 186 GLLLAMPETV 195 (413)
T ss_pred HHHHhCCCCc
Confidence 5455677754
No 87
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.15 E-value=2e-09 Score=109.23 Aligned_cols=246 Identities=11% Similarity=0.069 Sum_probs=146.4
Q ss_pred chhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHHhhh
Q 012185 64 QGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALV 143 (469)
Q Consensus 64 ~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~~~i 143 (469)
.....+++.|..| ++|+++.++.+...++|..++..++... ... .+..||..|.+.+++.+++..
T Consensus 105 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l-----~~~--------~~~~w~~~f~~~~~~~~~~~~- 169 (355)
T TIGR00896 105 NVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPL-----AQH--------SGGHWQQALAWWALPALLALL- 169 (355)
T ss_pred hccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHH-----HHh--------hhhhHHHHHHHHHHHHHHHHH-
Confidence 3345567778775 6899999999999999998887666431 110 012478887765554433322
Q ss_pred eeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCCCCCCcc
Q 012185 144 TIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPG 223 (469)
Q Consensus 144 t~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (469)
..+||.+..+.++.+ . ..
T Consensus 170 --~~~~~~~~~~~~~~~---------------------------------------------------~---------~~ 187 (355)
T TIGR00896 170 --AWIPQVRRRVAANQT---------------------------------------------------T---------TR 187 (355)
T ss_pred --HHhhhhccccCCCCC---------------------------------------------------C---------CC
Confidence 234443211100000 0 00
Q ss_pred chHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHH
Q 012185 224 AVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLG 303 (469)
Q Consensus 224 ~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~ 303 (469)
...++++++ +.++.+++..++.+.+++.+..|.+.|+.+ ++.++ + .......++.+...
T Consensus 188 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~--~g~~~----------~----~~g~~~~~~~~~~i 246 (355)
T TIGR00896 188 LTPVRIWRS-----PLAWQVTVFFGLQSGLYYSLIGWLPAILIS--HGASA----------A----TAGSLLALMQLAQA 246 (355)
T ss_pred CCCchhhcC-----HhHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCH----------H----HHHHHHHHHHHHHH
Confidence 011222221 344555566666667777777788888754 33321 1 11234445667788
Q ss_pred HHHHhHHHhhhhc-CchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccc
Q 012185 304 VSSFLIEPMCRWI-GSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSV 382 (469)
Q Consensus 304 i~s~i~~~l~~~i-g~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~v 382 (469)
+..++.+++.||+ +||+...++.++.+++.+...+... + ... ....+.|++.+.....
T Consensus 247 ~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---------------~~~---~~~~l~g~~~g~~~~~ 305 (355)
T TIGR00896 247 ASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPM---H---------------GLW---AWALVLGLGQGGAFPL 305 (355)
T ss_pred HHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhh---h---------------HHH---HHHHHHHHhhhhHhHH
Confidence 8899999999999 5666666777777666554443321 0 111 1345667777766655
Q ss_pred cchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccC
Q 012185 383 PFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGG 429 (469)
Q Consensus 383 P~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~ 429 (469)
-.+.+.+..+++ +..|..+|+.+....+...+.+...|.+.+..|+
T Consensus 306 ~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~ 351 (355)
T TIGR00896 306 ALTLIGLRSRQA-AQAAALSAMAQSIGYLLAALGPLFVGVLHDISGN 351 (355)
T ss_pred HHHHHHHhccCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 444555544432 3568889999999899989999889988877764
No 88
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.14 E-value=5.1e-09 Score=107.72 Aligned_cols=247 Identities=14% Similarity=0.011 Sum_probs=136.8
Q ss_pred ccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHHh
Q 012185 62 TVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCA 141 (469)
Q Consensus 62 ~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~~ 141 (469)
....-.++++.|..+++++++++++.+....+|..+|..++... .. ...||+.|.+.++..++..
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l-----~~----------~~g~~~~f~~~~~~~~~~~ 176 (394)
T PRK11652 112 VGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLL-----TT----------LFGWRACYLFLLLLGAGVT 176 (394)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----Hh----------ccChHHHHHHHHHHHHHHH
Confidence 33444677889999999999999999888888888888776531 10 1247888887766554444
Q ss_pred hheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCCCCCC
Q 012185 142 LVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDG 221 (469)
Q Consensus 142 ~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (469)
.+..+..||++..+.+ + + +
T Consensus 177 ~~~~~~~~~~~~~~~~--~-------------------------------------------------------~----~ 195 (394)
T PRK11652 177 FSMARWMPETRPADAR--R-------------------------------------------------------T----R 195 (394)
T ss_pred HHHHHhCCccCccccc--h-------------------------------------------------------h----H
Confidence 4444556775321100 0 0 0
Q ss_pred ccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHH
Q 012185 222 PGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVV 301 (469)
Q Consensus 222 ~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv 301 (469)
....++++++ .+.++..++..+....++..+..+.+.++.+ .++.++ . ..| +......+.
T Consensus 196 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~---------~----~~~-~~~~~~~~~ 255 (394)
T PRK11652 196 VLASYRTLLS-----NRRFNCYLLMLIGTLAGIAVFEACSGVLMGA-VLGLSS---------M----TVS-ILFILPIPA 255 (394)
T ss_pred HHHHHHHHHc-----ChHHHHHHHHHHHHHHHHHHHHHhChHHHHH-HcCCCH---------H----HHH-HHHHHHHHH
Confidence 1112333332 2345555554444455666666666666655 233221 1 122 223334555
Q ss_pred HHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhcc
Q 012185 302 LGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYS 381 (469)
Q Consensus 302 ~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~ 381 (469)
..+.+.+.+++.||.+++........+.+. +......... . .+.+.......+.|++.+....
T Consensus 256 ~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~--------------~~~~~~~~~~~~~~~g~~~~~~ 318 (394)
T PRK11652 256 AFFGAWFAGRPNKRFSTLMWQSVICCLLAG--LLMWIPGWFG-V--------------MNVWTLLVPAALFFFGAGMLFP 318 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHhc-c--------------ccHHHHHHHHHHHHHHHHHHHH
Confidence 666778888888888733322222222221 1111111000 0 0123334445556666665555
Q ss_pred ccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccce
Q 012185 382 VPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWD 424 (469)
Q Consensus 382 vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~ 424 (469)
.-.+...|..|+ ..|+..++.+....+.+.+.+...+.+.
T Consensus 319 ~~~~~~~~~~~~---~~g~~~~~~~~~~~lg~~~~~~~~~~~~ 358 (394)
T PRK11652 319 LATSGAMEPFPY---LAGTAGALLGGLQNIGSGLAALLSAMLP 358 (394)
T ss_pred HHHHHHHhhccc---cchHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 545566676663 5799999999998899888887776654
No 89
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.13 E-value=6.7e-10 Score=110.49 Aligned_cols=324 Identities=14% Similarity=0.150 Sum_probs=169.3
Q ss_pred HHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHHhhheeE
Q 012185 67 ARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIY 146 (469)
Q Consensus 67 ~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~~~it~~ 146 (469)
.-++-.|..|..+|..-.-+. .+-.+|.+..-++. |-.+..+ .||+......+++. -....++
T Consensus 186 ~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~la----w~vm~~~-----------gwr~~l~~~~~pl~-~~a~f~~ 248 (528)
T KOG0253|consen 186 DSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLA----WGVMSNF-----------GWRYLLFTSSTPLM-FAARFLV 248 (528)
T ss_pred hHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHH----HHHHHhh-----------hHHHHHHHHHhHHH-HHHHHHh
Confidence 556677889999988777766 55578888776555 2222211 57777666666664 3455688
Q ss_pred EeeccCCCCCCCCCCCCCCCCCCCcccccccccCC-CCCCCCCCCCCCccCCcccchhhhhhhccccccCCCCCCCccch
Q 012185 147 FADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKH-DMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAV 225 (469)
Q Consensus 147 ~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (469)
.+||+|+....+++..+|-+.| ++..+ .|. .++........++|++. .+.+.+.+ . .+++ ++....
T Consensus 249 w~~ESpRf~~~~G~~~kAletL---~kiAr--mNg~qlplgvl~~s~~~~~e~-e~~~~~~~-~-~~a~-----ke~rg~ 315 (528)
T KOG0253|consen 249 WVYESPRFYLAKGDDYKALETL---HKIAR--MNGKQLPLGVLESSAIDRQEQ-EESDLDDS-K-SSAA-----KEVRGG 315 (528)
T ss_pred hcccCcchhhhcCChHHHHHHH---HHHHH--hcCCCCCcceeeeehhhhhhh-hhhchhhh-h-hccc-----cccccc
Confidence 9999998766555422221111 11110 111 11100000000111100 00011100 0 0100 122334
Q ss_pred HHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeec-CC--C----CC--------CCh--hhhhHHHHh
Q 012185 226 LVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYH-GD--P----KG--------NDH--EVKFYDQGV 288 (469)
Q Consensus 226 ~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~-g~--~----~~--------~~~--~~~~y~~gv 288 (469)
.++++. +.+|+--+.+-+.|+| +.+.||..--+.-+.|+ +| | .. |.+ ..+.|-
T Consensus 316 ~~nLls------p~lrkttlllw~iwfg-nafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYr--- 385 (528)
T KOG0253|consen 316 TTNLLS------PKLRKTTLLLWRIWFG-NAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYR--- 385 (528)
T ss_pred hHhhcC------hHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHH---
Confidence 444443 2344433333444443 34444443333323332 12 0 00 100 122332
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHH
Q 012185 289 REGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVV 368 (469)
Q Consensus 289 ~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (469)
-+++.+..-+=-.++...++||+|||+.+..+.++++++++....... + |.+..+.+
T Consensus 386 -----dllitslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~---r---------------n~~tvllf 442 (528)
T KOG0253|consen 386 -----DLLITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKT---R---------------NAYTVLLF 442 (528)
T ss_pred -----HHHHHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcC---c---------------chhHHHHH
Confidence 223333444445678889999999999999999999988765444331 0 12222222
Q ss_pred HHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHH
Q 012185 369 FTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVV 448 (469)
Q Consensus 369 ~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~ 448 (469)
. .-+.....+.+-|....|.+|... +++..|.-....=+.-|+.+++. ...+.. ......+++.+++++++.
T Consensus 443 ~--arafisg~fqvaYvYtPEVyPTav--RatgvGtcSsmaRIggI~~p~iA-~~~e~s---~sl~i~vy~~~~ilagIa 514 (528)
T KOG0253|consen 443 T--ARAFISGAFQVAYVYTPEVYPTAV--RATGVGTCSSMARIGGIFSPVIA-MRAELS---TSLPIFVYGALFILAGIA 514 (528)
T ss_pred H--HHHHHhchheEEEEecCcccchhh--hhcchhhhhhHHhhhhhhhhHHH-HHhccc---eeehHHHHHHHHHHHHHH
Confidence 1 223333355666778899999874 45558887777777777777666 222211 123466677778889997
Q ss_pred hhhcccCCCCCCc
Q 012185 449 ATLKLPHLSSNSF 461 (469)
Q Consensus 449 ~~~~vpet~g~~~ 461 (469)
++++--|||||+.
T Consensus 515 vcffPiEtkGR~l 527 (528)
T KOG0253|consen 515 VCFFPIETKGRSL 527 (528)
T ss_pred heeeeeccCCCCC
Confidence 7777779999985
No 90
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.12 E-value=4.9e-09 Score=105.14 Aligned_cols=276 Identities=13% Similarity=0.087 Sum_probs=161.8
Q ss_pred hHHHHHHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccc-----hhhhc
Q 012185 47 FVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTS-----RACCA 121 (469)
Q Consensus 47 ~~~v~g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~-----~~~~~ 121 (469)
...++++.++-.++-.+|....+|+.|+-|+|++.+..++.+.+.++|.++|.+++... ......+ +....
T Consensus 11 ~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~----i~~~~~~~~~~~~~~~~ 86 (310)
T TIGR01272 11 VLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSL----ILSGAGDLSMQVATANA 86 (310)
T ss_pred HHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHH----HhcCCcchhhhhhhhhH
Confidence 45677899999999999999999999999999999999999999999999999888742 1000000 00000
Q ss_pred ccchhHHHHH-HHHHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCccc
Q 012185 122 ACGNLKAAFL-VAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHES 200 (469)
Q Consensus 122 ~~~~~~~~f~-i~~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (469)
...+|+..|+ ++++..++.+.+.....||.+. +++++
T Consensus 87 ~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~--~~~~~---------------------------------------- 124 (310)
T TIGR01272 87 EAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE--ADVAR---------------------------------------- 124 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc--ccccc----------------------------------------
Confidence 0136788888 4444444444443333444211 00000
Q ss_pred chhhhhhhccccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhce-eecCCCCCCCh
Q 012185 201 DANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGRE-VYHGDPKGNDH 279 (469)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~-vf~g~~~~~~~ 279 (469)
..++ + ....+.+++. | .++...+.+|+--.+..++.-+.+.|+.+. .++-++
T Consensus 125 ---------~~~~--~------~~~~~~~~~~----~-~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~----- 177 (310)
T TIGR01272 125 ---------VSSG--D------TTQKTSAFQF----T-HLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPE----- 177 (310)
T ss_pred ---------cccc--c------ccchhhHHhh----H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCH-----
Confidence 0000 0 0001112221 2 233223334433335667777778887652 233221
Q ss_pred hhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCch
Q 012185 280 EVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQ 359 (469)
Q Consensus 280 ~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (469)
....+....+.....+..++.+++.||+|+||+..++.++.+++++...... +
T Consensus 178 ---------~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~-----------------~- 230 (310)
T TIGR01272 178 ---------DQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTH-----------------G- 230 (310)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcC-----------------C-
Confidence 1222344556667778888999999999999887777665554432211111 0
Q ss_pred hHHHHHHHHHHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccC
Q 012185 360 AIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGG 429 (469)
Q Consensus 360 ~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~ 429 (469)
.. ....+.++|++.+..+..-+++..+.+|++ .|...++.. ...+...+.+.+.|.+.+..|.
T Consensus 231 --~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~---~~~asai~~-~~~~Gg~i~P~l~G~lad~~g~ 293 (310)
T TIGR01272 231 --YV-AMWFVLALGLFNSIMFPTIFSLALNALGRH---TSQGSGILC-LAIVGGAIVPLLQGSLADCLGI 293 (310)
T ss_pred --HH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhh---hhhhHHHHH-HHHhcchHHHHHHHHHHHhccc
Confidence 11 122444677777777777677888887763 344466654 4457778888888888776663
No 91
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.08 E-value=2e-09 Score=109.46 Aligned_cols=306 Identities=12% Similarity=0.065 Sum_probs=195.9
Q ss_pred HHHHHHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccc------c-ccchhhhhhcccchhhh
Q 012185 48 VFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAG------A-SGSWHRWFPFLTSRACC 120 (469)
Q Consensus 48 ~~v~g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g------~-~~~w~~~~~~~~~~~~~ 120 (469)
+.++.+.+.+.+.+..+.+..|+++|..++++-+|.++..=-+.-+|+.+..... + -.-+...+ +.+..
T Consensus 117 ~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l-~~l~~--- 192 (438)
T COG2270 117 LLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIIL-LGLPP--- 192 (438)
T ss_pred HHHHHHHHHHHhcchhheehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEe-eccCc---
Confidence 4555667789999999999999999999998888776554334444444332221 0 00011110 00000
Q ss_pred cccchhHHHHHHHHHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCccc
Q 012185 121 AACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHES 200 (469)
Q Consensus 121 ~~~~~~~~~f~i~~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (469)
..+...|..+.++++-.++-.+..+..+||.+... .+. +
T Consensus 193 ~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~~---~~~--~------------------------------------ 231 (438)
T COG2270 193 ADGEDVRITGLLAALWWLLFALPMILNVHDAEKIS---SPP--P------------------------------------ 231 (438)
T ss_pred cccccchhHHHHHHHHHHHHHhHHHhccccccccc---ccc--h------------------------------------
Confidence 12357788899988888888888888888765321 010 0
Q ss_pred chhhhhhhccccccCCCCCCCccchHHHHHHHhccC--CHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCC
Q 012185 201 DANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHL--PPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGND 278 (469)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~m--P~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~ 278 (469)
+...+.+++++.++++. -+.+.+..+..++-.=|.++.+-..+.|-.. .|+-+
T Consensus 232 -------------------~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~-~~gls----- 286 (438)
T COG2270 232 -------------------TALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAA-DLGLS----- 286 (438)
T ss_pred -------------------HHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHH-HcCcc-----
Confidence 00223444444443322 2366777777887777999998888865442 34422
Q ss_pred hhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCc
Q 012185 279 HEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGAN 358 (469)
Q Consensus 279 ~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (469)
...+..++ +.-++++++.+++.|++.||+|.|++..++.++..+..+...+..
T Consensus 287 --------~~~lll~g-~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~------------------ 339 (438)
T COG2270 287 --------STELLLIG-IALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLE------------------ 339 (438)
T ss_pred --------HHHHHHHH-HHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHcc------------------
Confidence 11233233 345578889999999999999999998888776654322222221
Q ss_pred hhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHH
Q 012185 359 QAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLA 438 (469)
Q Consensus 359 ~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~ 438 (469)
.....+++-.+.|...|...+.--++.++..|++ +.|.++|++|++--..-++.+...+.+.+..|+.. .-+..-
T Consensus 340 --~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~--k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r-~g~~~i 414 (438)
T COG2270 340 --GELDFWILGLLVGTSLGGAQASSRSYLARLVPKG--KEGRFFGLYALTGRAASFLGPFLVAVITQITGSSR-AGVLSI 414 (438)
T ss_pred --ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCc--cccceeehhhhhhhHHHHHHHHHHHHHHHHhcchh-hHHHHH
Confidence 1233445555677777777777888999999986 78999999999999998988888888888777543 334444
Q ss_pred HHHHHHHHHHhhhcccCC
Q 012185 439 SLSALAGGVVATLKLPHL 456 (469)
Q Consensus 439 ~v~~liaai~~~~~vpet 456 (469)
.++.+++.+ ..+++|+.
T Consensus 415 ~vll~iGl~-~L~~v~~~ 431 (438)
T COG2270 415 IVLLLIGLL-LLLRVKVP 431 (438)
T ss_pred HHHHHhhHh-hEEeecCC
Confidence 555555555 66777765
No 92
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.04 E-value=1.9e-08 Score=105.70 Aligned_cols=289 Identities=11% Similarity=0.028 Sum_probs=165.8
Q ss_pred cccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhcccccc-chhhhhhcccchh-hhc--ccchhHHHHHHHHHH
Q 012185 61 NTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASG-SWHRWFPFLTSRA-CCA--ACGNLKAAFLVAVVF 136 (469)
Q Consensus 61 n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~-~w~~~~~~~~~~~-~~~--~~~~~~~~f~i~~i~ 136 (469)
.....+.-..+....|+++|+++.++..-..++|..++.++.-.. ... ++...+... ... ....+|..+.+-.++
T Consensus 142 g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~-l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~ 220 (462)
T PRK15034 142 GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVP-VFAFLGVNGVPQADGSVMSLANAAWIWVPL 220 (462)
T ss_pred HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHH-HHHHhccccccccccchHHHHHHHHHHHHH
Confidence 335678888999999999999999999877778887766554210 000 000000000 000 011255555554444
Q ss_pred HHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCC
Q 012185 137 LTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNG 216 (469)
Q Consensus 137 ~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (469)
.+++.++..+..+|.|. + +
T Consensus 221 ~iv~~i~~~~~~~~~~~---~--~-------------------------------------------------------- 239 (462)
T PRK15034 221 LAIATIAAWSGMNDIAS---S--R-------------------------------------------------------- 239 (462)
T ss_pred HHHHHHHHHHhCCCccc---c--c--------------------------------------------------------
Confidence 44444333334444221 0 0
Q ss_pred CCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHH
Q 012185 217 SFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLL 296 (469)
Q Consensus 217 ~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~ 296 (469)
.++++..+. .++|+ .|.+|+..+.++-++..+.+|++.|..+ .|.. . ...+. ..
T Consensus 240 -------~~~~~~~~v-lk~~~-~Wllslly~~tFG~fvg~s~~lp~~~~~-~~~~-----------~-~~l~~----~~ 293 (462)
T PRK15034 240 -------ASIADQLPV-LQRLH-LWLLSLLYLATFGSFIGFSAGFAMLAKT-QFPD-----------V-NILRL----AF 293 (462)
T ss_pred -------cCHHHHHHH-hCCCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCh-----------H-HHHHH----HH
Confidence 012222222 23444 6888888888888888888888887644 3321 0 11111 22
Q ss_pred HHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccch
Q 012185 297 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPL 376 (469)
Q Consensus 297 i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~ 376 (469)
+..++..+...+.+++.||+|+|++..++.+.++++........ +.+. ... -+......+.++..+|++.
T Consensus 294 l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~l--p~~~-----~~~---~~~~~~~~~~l~~~~G~gn 363 (462)
T PRK15034 294 FGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTL--PGTG-----SGN---FIAFYAVFMGLFLTAGLGS 363 (462)
T ss_pred HHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHh--cccc-----ccH---HHHHHHHHHHHHHHhcccc
Confidence 23456666777889999999999999888877766543322221 1000 000 0011222344556678877
Q ss_pred hhhccccchhhhccccC------C-------------CCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHH
Q 012185 377 AITYSVPFAITAELTAD------S-------------GGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVL 437 (469)
Q Consensus 377 a~~~~vP~aLise~~p~------~-------------~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~ 437 (469)
+.++ .++.+++|+ + ++..|...|+.+..-.+.-++.+..+|...+..|+. ...|..
T Consensus 364 gsvf----k~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~-~~~~~~ 438 (462)
T PRK15034 364 GSTF----QMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSP-VGAMKV 438 (462)
T ss_pred hHHH----HhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCc-HHHHHH
Confidence 7665 356666653 0 124677888888888887788888888777777764 466777
Q ss_pred HHHHHHHHHHHhhhc
Q 012185 438 ASLSALAGGVVATLK 452 (469)
Q Consensus 438 ~~v~~liaai~~~~~ 452 (469)
..++-+++.+..|+.
T Consensus 439 ~~~~~~~~~~~~w~~ 453 (462)
T PRK15034 439 FLIFYIVCVLLTWLV 453 (462)
T ss_pred HHHHHHHHHHHHHHH
Confidence 777777666656654
No 93
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.01 E-value=2.3e-08 Score=101.76 Aligned_cols=291 Identities=13% Similarity=0.170 Sum_probs=179.9
Q ss_pred cchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHHhh
Q 012185 63 VQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCAL 142 (469)
Q Consensus 63 ~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~~~ 142 (469)
--.|+-..|.--.|+++||+..++=+..-++|+.+.-.+.. |.... ...+||..|++..++.++.-+
T Consensus 134 Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~---la~~~----------~~~~w~~~f~~pgiiaiival 200 (448)
T COG2271 134 GWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVAL---LAFFA----------FHGGWRAAFYFPGIIAIIVAL 200 (448)
T ss_pred CCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHH---HHHHH----------hccchhHHHHHHHHHHHHHHH
Confidence 34678899999999999999988877777888877654441 10011 023799999999999888888
Q ss_pred heeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCCCCCCc
Q 012185 143 VTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGP 222 (469)
Q Consensus 143 it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (469)
+.+...||+|...--+.- ++-+++ +.|.+ ++ ++ | ++
T Consensus 201 ~~~~~~rd~Pqs~GLP~i----------------e~~~~d----------------~~e~~-~~-----~~--~----~~ 236 (448)
T COG2271 201 ILLFLLRDRPQSEGLPPI----------------EEYRGD----------------PLEIY-EE-----EK--E----NE 236 (448)
T ss_pred HHHHHhCCCccccCCCCH----------------HHhhcC----------------chhhh-hh-----hc--c----CC
Confidence 888889998743211100 000000 00111 00 00 1 11
Q ss_pred cchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHH
Q 012185 223 GAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVL 302 (469)
Q Consensus 223 ~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~ 302 (469)
..+.++++....--.|.+|.+|++.++..+.=+.+.--.+.|+.| +-+-+ . ....++...|=+..
T Consensus 237 ~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e-~k~~s------------~--~~a~~a~~lfE~ag 301 (448)
T COG2271 237 GLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSE-VKGFS------------L--VKANWAISLFEVAG 301 (448)
T ss_pred CccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hcCCC------------H--HHHHHHHHHHHHHh
Confidence 134555554422234779999999999988888888888888877 32211 1 12235666677778
Q ss_pred HHHHHhHHHhhhhc--CchHHHHH-HHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhh
Q 012185 303 GVSSFLIEPMCRWI--GSRLVWAI-SNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAIT 379 (469)
Q Consensus 303 ~i~s~i~~~l~~~i--g~r~l~~~-s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~ 379 (469)
+..+++.++++||+ |||....+ ..++..+|++..-+.. ..+.+...++...+|+ +
T Consensus 302 l~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~------------------~~~~~l~~~~l~~iGf----~ 359 (448)
T COG2271 302 LPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAP------------------NGSYLLDAILLFIIGF----L 359 (448)
T ss_pred hHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCC------------------CccHHHHHHHHHHHHH----H
Confidence 88899999999997 67755433 3333322222111111 1123444444444554 3
Q ss_pred ccccchhhh----ccccCCCCCccchhhHHHHHHHH-HHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhh
Q 012185 380 YSVPFAITA----ELTADSGGGQGLAIGVLNLAIVI-PQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATL 451 (469)
Q Consensus 380 ~~vP~aLis----e~~p~~~~~~G~~~gi~n~~i~l-~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~ 451 (469)
..-|-.|++ |..|++ -.|+..|..+.+.++ ....+....|.+.+..| ....|++-.+.++++.++...
T Consensus 360 IyGPqmLiGl~a~e~~pK~--AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~g--W~g~Fi~~~~~a~l~~lll~~ 432 (448)
T COG2271 360 IYGPQMLIGLAAAEFVPKK--AAGTATGFVGLFAYLIGAALAGLPLGYIADTWG--WDGGFIVLSIAALLAILLLLP 432 (448)
T ss_pred HhhHHHHHHHHHhccccHh--hccchhchhhhHHHHhhHHhcCCcceeeEecCC--CcchHHHHHHHHHHHHHHHHH
Confidence 334444443 666765 789999999999999 88888888888877655 224577766667776665443
No 94
>PRK10054 putative transporter; Provisional
Probab=99.01 E-value=5.3e-09 Score=108.26 Aligned_cols=183 Identities=11% Similarity=0.018 Sum_probs=131.8
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhh
Q 012185 235 HLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCR 314 (469)
Q Consensus 235 ~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~ 314 (469)
++||+++-+.++.++.+.|+.....+.+.|+.++ ++-++ ...| +.+.++.+...+.+.+.+++.|
T Consensus 4 ~~~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~-~g~s~-------------~~~g-~~~s~~~~~~~~~~~~~G~l~D 68 (395)
T PRK10054 4 SLRRSTSALLASSLLLTIGRGATLPFMTIYLSRQ-YSLSV-------------DLIG-YAMTIALTIGVVFSLGFGILAD 68 (395)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCH-------------HHHH-HHHHHHHHHHHHHHHHHHHHHh
Confidence 4678888899999999999999999999888652 33321 1233 4555667778888899999999
Q ss_pred hcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCC
Q 012185 315 WIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADS 394 (469)
Q Consensus 315 ~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~ 394 (469)
|+|||++..++.++.+++.+...+.. +.+..++...+.|...+....+-.++.+|..|++
T Consensus 69 r~g~k~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 128 (395)
T PRK10054 69 KFDKKRYMLLAITAFASGFIAIPLVN--------------------NVTLVVLFFALINCAYSVFSTVLKAWFADNLSST 128 (395)
T ss_pred hcCcchhHHHHHHHHHHHHHHHHHHh--------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHh
Confidence 99999999988888877666555443 1333334444566666655554456778888765
Q ss_pred CCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccCCC
Q 012185 395 GGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLS 457 (469)
Q Consensus 395 ~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpet~ 457 (469)
.+|+.+|+.+....+...+.+...+.+.+ .| ...+|.+.+++.+++.+.+.+++|+++
T Consensus 129 --~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g--~~~~f~~~~~~~~i~~i~~~~~~~~~~ 186 (395)
T PRK10054 129 --SKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QS--INLPFWLAAICSAFPLVFIQIWVQRSE 186 (395)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hc--cCcHHHHHHHHHHHHHHHHHHHHhccc
Confidence 67888999999999999988887776654 34 346788888888887765666666553
No 95
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.99 E-value=1.2e-08 Score=102.30 Aligned_cols=294 Identities=14% Similarity=0.083 Sum_probs=153.0
Q ss_pred cccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHH
Q 012185 61 NTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLC 140 (469)
Q Consensus 61 n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~ 140 (469)
|---+++||+++|+.++|+|+++.+.....-++|-++|..+|+++ .. ++ +..+..+. -...++..+....-
T Consensus 135 kgnl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyl--a~-f~----~~~g~~p~--alP~~~v~i~a~~~ 205 (451)
T KOG2615|consen 135 KGNLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYL--AQ-FS----SISGSYPF--ALPCLLVFILAAGD 205 (451)
T ss_pred cCchHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHH--Hh-hH----hhhccCch--HHHHHHHHHHHHHH
Confidence 334578999999999999999999999999999999999999873 21 11 01111111 11122333333333
Q ss_pred hhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCCCCC
Q 012185 141 ALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFND 220 (469)
Q Consensus 141 ~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (469)
+...+++.||+ ++..+++ +++.+.. |.. +++.+
T Consensus 206 v~~~~~~lpET-L~~rk~~--~~~~~~~--------------------------------~~~--------~~~~~---- 238 (451)
T KOG2615|consen 206 VTFFPWFLPET-LPLRKRN--DEHSTLQ--------------------------------EAA--------DDRLA---- 238 (451)
T ss_pred HHHHHHhCCcc-ccchhhc--ccccchh--------------------------------hhh--------hhhhh----
Confidence 55667788886 2222211 1111000 000 00000
Q ss_pred CccchHHHHHHHhccCCH----HHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHH
Q 012185 221 GPGAVLVNLLTSLRHLPP----AMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLL 296 (469)
Q Consensus 221 ~~~~~~~~l~~~~~~mP~----~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~ 296 (469)
..+....+-...++++|. ..+++...|.+...-.++.+-|+..++.+.-|+-+|. ++|--.
T Consensus 239 ~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~---------~~G~vl------ 303 (451)
T KOG2615|consen 239 LLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSM---------QQGKVL------ 303 (451)
T ss_pred hcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChh---------hheeee------
Confidence 001111122223444442 3455566777777788888888877774434544432 233211
Q ss_pred HHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccch
Q 012185 297 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPL 376 (469)
Q Consensus 297 i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~ 376 (469)
+........+...+.++..|-+=-.-+.+.+.+-....+++..- ... ......+...+.-++-
T Consensus 304 --~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls--~~~-------------~~~~l~~~s~l~sf~~ 366 (451)
T KOG2615|consen 304 --STTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLS--LAR-------------TPVVLYLGSTLKSFST 366 (451)
T ss_pred --ehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHh--ccc-------------cchhhhHHHHHHHHHH
Confidence 12223333333333333322220122222222222222222210 000 1222333334444555
Q ss_pred hhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHH
Q 012185 377 AITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALA 444 (469)
Q Consensus 377 a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~li 444 (469)
+...+--+.|+..+.|.+ .+|+.+|+.-....++-++.+++.|.+..+..+.....+..++++...
T Consensus 367 A~~vt~Lt~Lv~~~~~~~--qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws~~~~~a~~~~~~L~~~~ 432 (451)
T KOG2615|consen 367 ASVVTCLTSLVHKYGPQS--QRGTLNGIFRSLGALARAIGPLVSGVIFSWSQGAQPAYIAWGALLLIP 432 (451)
T ss_pred HHhhHHHHHHHHhcCCcc--cchHHHHHHHHHHHHHHHhhhhhhheeEEEecCCCceeeehHHHHHHH
Confidence 555566567888899887 679999999999999999999999988776543332334444444443
No 96
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.97 E-value=3.7e-09 Score=112.08 Aligned_cols=314 Identities=13% Similarity=0.054 Sum_probs=164.6
Q ss_pred HHHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHH---HhhhHHhhccccccchhhhhhcccchhhhcccchhH
Q 012185 51 IGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWM---AVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLK 127 (469)
Q Consensus 51 ~g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~---glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~ 127 (469)
+..++..++.-....+..++..|..+ |+|+.+++.++..- ++|.++|..+++.. .+. ..++
T Consensus 125 ~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l--~~~-------------~~~~ 188 (468)
T TIGR00788 125 AFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPL--LDK-------------TLTR 188 (468)
T ss_pred HHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHH--HHh-------------cCcc
Confidence 45667777777778899999999999 66666655554333 37888887666541 111 1467
Q ss_pred HHHHHHHHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhh
Q 012185 128 AAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHI 207 (469)
Q Consensus 128 ~~f~i~~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (469)
..|.+.++..++. .+....+||++.....+.+. +. ...+ ....
T Consensus 189 ~~f~~~a~l~ll~-~~~~~~~~E~~~~~~~~~~~-~~--------------------------------~~~~-~~~~-- 231 (468)
T TIGR00788 189 ILFLITAALLLLQ-LFVSNLSKERRAFVRPRIGT-YL--------------------------------EMNM-ALLT-- 231 (468)
T ss_pred hHHHHHHHHHHHH-HHHHHhcccccccccccccc-cc--------------------------------hhhh-hhhh--
Confidence 7887777776655 33456678864110000000 00 0000 0000
Q ss_pred hccccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHH
Q 012185 208 SKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQG 287 (469)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~g 287 (469)
....+ ...+.++++++.++ .|.+++..+..|+++....... +...+..+...+.+| -+.|
T Consensus 232 ~~~~~--------~~~~~~~~l~~~l~--~~~i~~~l~fifl~~~~~~~~~-~~~f~~~~~~lG~s~---------~~~G 291 (468)
T TIGR00788 232 LGVLA--------NVKVQILGLRGAIQ--LLEIAKPLIFIFLSYANLPGAS-GSVFCATTQCLPGGP---------SFSG 291 (468)
T ss_pred hhHHH--------HHHHHHHHHHHHHh--cHHHHHHHHHHHHHHhhcCCCC-ceeEEEEcccCCCCc---------chhh
Confidence 00000 01122445555443 2455554443333222111110 000001001112222 1222
Q ss_pred hHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHH
Q 012185 288 VREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLV 367 (469)
Q Consensus 288 v~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (469)
. .....++..++......++.+|++.|+++.++.++.+++.....+..... +.. . +.+ ..+..+.
T Consensus 292 ~-----~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~-~~~---~--gi~----~~~~~~~ 356 (468)
T TIGR00788 292 M-----SKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRW-NLA---F--GIS----DEVFVLG 356 (468)
T ss_pred h-----HHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeecc-ccc---c--CCC----Ceeeeee
Confidence 2 22234466777788888888999999999999888877654432211000 000 0 000 0112222
Q ss_pred HHHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceeccc-----Cccc-hHHHHHHHH
Q 012185 368 VFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFG-----GGNI-PAFVLASLS 441 (469)
Q Consensus 368 ~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g-----~~~~-~~f~~~~v~ 441 (469)
...+.++..+.....-..++++..|++ ..|++.|+++....+++.+.+...+.+.+..| .++. ....+..++
T Consensus 357 ~~~l~~~~~g~~~~~~~~~~~~~~p~~--~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~ 434 (468)
T TIGR00788 357 DSIIAEVLAQLKFMPFLVLLARLCPSG--CESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLA 434 (468)
T ss_pred hhHHHHHHHHHHHccHHHHHHHhCCCC--ceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHH
Confidence 333444454444444456788888875 78999999999999999999988888877776 2222 224445555
Q ss_pred HHHHHHHhhhcccC
Q 012185 442 ALAGGVVATLKLPH 455 (469)
Q Consensus 442 ~liaai~~~~~vpe 455 (469)
.++...++ .++|+
T Consensus 435 ~l~~l~~~-~llP~ 447 (468)
T TIGR00788 435 PLLPLPLL-HLLPR 447 (468)
T ss_pred HHHHHHHH-HhCCC
Confidence 66665544 47883
No 97
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=98.91 E-value=1.5e-08 Score=104.98 Aligned_cols=181 Identities=15% Similarity=0.073 Sum_probs=131.2
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhh
Q 012185 234 RHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMC 313 (469)
Q Consensus 234 ~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~ 313 (469)
+++|| +.+....++.+.+++.+.-|.+.|+.++ .+.+ ....| +.+..+.+...+.+.+.+++.
T Consensus 8 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s-------------~~~~g-l~~~~~~l~~~~~~~~~G~l~ 70 (400)
T PRK11646 8 RNLGK--YFLLIDNMLVVLGFFVVFPLISIRFVDQ-LGWA-------------AVMVG-IALGLRQFIQQGLGIFGGAIA 70 (400)
T ss_pred ccccH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCc-------------HHHHH-HHHHHHHHHHHHHHhhhhHHH
Confidence 45787 5567889999999999998988877542 2322 11233 444556677777788999999
Q ss_pred hhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccC
Q 012185 314 RWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTAD 393 (469)
Q Consensus 314 ~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~ 393 (469)
||+|||++...+.++.+++++...+.. +.+..++...+.|++.+.....=.+++.+..|+
T Consensus 71 dr~g~k~~l~~~~~~~~~~~~~~~~~~--------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~ 130 (400)
T PRK11646 71 DRFGAKPMIVTGMLMRAAGFATMAIAH--------------------EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRP 130 (400)
T ss_pred HHhCchHHHHHHHHHHHHHHHHHHHhc--------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCH
Confidence 999999999999998888776654432 134445556667776664433335678888886
Q ss_pred CCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccCC
Q 012185 394 SGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL 456 (469)
Q Consensus 394 ~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpet 456 (469)
+ .+|..+|+.+....+.+.+.+...+.+. ..| ..+.|.+.++..+++++...+++||.
T Consensus 131 ~--~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g--~~~~f~~~~~~~~~~~i~~~~~~~~~ 188 (400)
T PRK11646 131 H--QRGRFFSLLMMQDSAGAVIGALLGSWLL-QYD--FRLVCATGAVLFVLAAAFNAWLLPAY 188 (400)
T ss_pred H--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhh--HHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 5 6788899999999999999988888776 344 34678888888777777666677764
No 98
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.91 E-value=4.1e-08 Score=104.83 Aligned_cols=177 Identities=19% Similarity=0.143 Sum_probs=132.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC
Q 012185 238 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 317 (469)
Q Consensus 238 ~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig 317 (469)
+.+..+++...+.-+|++...+|.++|..+..+.. . .....+.+.+++..+.-++.+.+.|+..
T Consensus 298 ~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~g~~~-----------~-----~aa~l~Siigi~~i~gRi~~G~laD~~~ 361 (509)
T KOG2504|consen 298 PKFLLLALSNLFAYLGFNVPFVYLPSYAKSLGLSS-----------N-----DAAFLLSIIGVSDIIGRIILGLLADKPG 361 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCh-----------h-----hhHHHHHHHHHhhhhhhhhhhhhcCccc
Confidence 45666788888899999999999999887532221 1 1224445566788888899999999987
Q ss_pred chHHHHH--HHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCC
Q 012185 318 SRLVWAI--SNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSG 395 (469)
Q Consensus 318 ~r~l~~~--s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~ 395 (469)
.++.++. +.++.+++.+...+.+ +....+..+.++|++.+....++.-++.|+...+
T Consensus 362 ~~~~~~~~~~ll~~gl~~~~~p~~~--------------------~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~- 420 (509)
T KOG2504|consen 362 IRALVLFLLTLLIAGLARLFLPFAT--------------------TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLE- 420 (509)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhc--------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChh-
Confidence 5555544 4444444332222222 2566778888999999999999888999999876
Q ss_pred CCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhccc
Q 012185 396 GGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLP 454 (469)
Q Consensus 396 ~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vp 454 (469)
......|++.++..++.++.+.+.|.+.+..|++ ...|.+.|++.+++++ +++++|
T Consensus 421 -~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y-~~~f~~~g~~~~~s~~-~~~~~~ 476 (509)
T KOG2504|consen 421 -KLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNY-DHAFYFCGLCFLLSAV-LLLILR 476 (509)
T ss_pred -hcchHHHHHHHHhHHHHHcCcccceeeeeccCCe-eeehhhcChHHHHHHH-HHHHhH
Confidence 6777899999999999999999999888888864 4679999998888887 666666
No 99
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.90 E-value=1.5e-07 Score=97.97 Aligned_cols=273 Identities=13% Similarity=0.085 Sum_probs=146.1
Q ss_pred HHHHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhcccccc---c---hhhhhhcccchhh----
Q 012185 50 VIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASG---S---WHRWFPFLTSRAC---- 119 (469)
Q Consensus 50 v~g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~---~---w~~~~~~~~~~~~---- 119 (469)
.++..+.-++....+.+..+++.+..|+++|++..++.+...++|..+|.+++... . +........+.+.
T Consensus 98 l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 177 (410)
T TIGR00885 98 LVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAI 177 (410)
T ss_pred HHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHH
Confidence 34455667777888888899999999999999999999999999999998877531 0 0000000000000
Q ss_pred -hcccchhHHHHHHHHHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCc
Q 012185 120 -CAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGH 198 (469)
Q Consensus 120 -~~~~~~~~~~f~i~~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (469)
.....+||..|.+.+++.++..++. ...|+++. ++++ +
T Consensus 178 ~~~~~~~w~~~fl~~a~~~~~~~~~~-~~~~~p~~---~~~~--~----------------------------------- 216 (410)
T TIGR00885 178 KHSDLASVQTPYMIIGAVVLAVALLI-MLTKMPAL---NHSD--A----------------------------------- 216 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCCCC---Cccc--c-----------------------------------
Confidence 0001358998977666554433322 12222111 1000 0
Q ss_pred ccchhhhhhhccccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCC
Q 012185 199 ESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGND 278 (469)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~ 278 (469)
.+ + ...+.++++++. +.++..++..|+-..+-.....|.++|..+...+ .
T Consensus 217 ------------~~---~----~~~~~~~~~~~~-----~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~-~----- 266 (410)
T TIGR00885 217 ------------KQ---I----SFSASLSRLARI-----RHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPG-M----- 266 (410)
T ss_pred ------------cc---c----cchhhHHHHHhC-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-C-----
Confidence 00 0 001122333332 3345556666665445556777778777542211 1
Q ss_pred hhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCc
Q 012185 279 HEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGAN 358 (469)
Q Consensus 279 ~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (469)
+++.. + .-+..+-....+.-++..++.||+++|+++.+..++.+++.+...+.. +
T Consensus 267 ------~~~~a-~-~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~-----------------~ 321 (410)
T TIGR00885 267 ------TAGFA-A-NYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAG-----------------G 321 (410)
T ss_pred ------CHHHH-H-HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcC-----------------C
Confidence 01110 0 011112234456677778999999999987776655555443333221 0
Q ss_pred hhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceec
Q 012185 359 QAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDAL 426 (469)
Q Consensus 359 ~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~ 426 (469)
. ..+..+.+.|...+.....-|++..+..+++ ....-+.+-+++ ++-.+.+..+|.+.+.
T Consensus 322 ---~-~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~---~~~~s~~l~~~~-~Gga~~p~l~G~~~d~ 381 (410)
T TIGR00885 322 ---H-VGLYCLTLCSAFMSLMFPTIYGIALKGLGQD---TKYGAAGLVMAI-IGGGIVPPLQGFIIDM 381 (410)
T ss_pred ---h-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh---hhhhHHHHHHHH-hccchHHHHHHHHHHH
Confidence 1 1234455556666655555566777777654 222233333333 6777777888887774
No 100
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.89 E-value=3e-08 Score=105.65 Aligned_cols=173 Identities=8% Similarity=0.038 Sum_probs=125.9
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhh
Q 012185 235 HLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCR 314 (469)
Q Consensus 235 ~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~ 314 (469)
+.|+.++.++.++++.-++++.+.-+...|+.++ ++-+ + ....+....+.....+...+.+++.|
T Consensus 11 ~~p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~-lg~~------------~--~~a~~i~~~~~~~~~~~~~~~G~laD 75 (489)
T PRK10207 11 QQPRPFFMIFFVELWERFGYYGVQGILAVFFVKQ-LGFS------------Q--EQAFITFGAFAALVYGLISIGGYVGD 75 (489)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCC------------H--HHHHHHHHHHHHHHHHHHhhHHHhhh
Confidence 3688999999999887788888888888887653 2322 1 11224444455566666778899999
Q ss_pred h-cCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccC
Q 012185 315 W-IGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTAD 393 (469)
Q Consensus 315 ~-ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~ 393 (469)
| +||||++.+|.++++++...+++... .....++..++.|++.+.....+.++++|.+|+
T Consensus 76 r~~G~r~~~~~g~~~~~~g~~~~~~~~~-------------------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~ 136 (489)
T PRK10207 76 HLLGTKRTIVLGAIVLAIGYFMTGMSLL-------------------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPP 136 (489)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHhcc-------------------chhHHHHHHHHHHhccccccCCHHHHHHHhcCC
Confidence 9 99999999999999887766554421 012233455667888888888888999999988
Q ss_pred CCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHH
Q 012185 394 SGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSAL 443 (469)
Q Consensus 394 ~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~l 443 (469)
++|+++..+++....+.++..+.+...|.+.+..| ..+.|.+.++..+
T Consensus 137 ~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~g--w~~~F~i~~i~~~ 184 (489)
T PRK10207 137 KDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFG--YSVTYNLCGAGLI 184 (489)
T ss_pred CchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhC--hHHHHHHHHHHHH
Confidence 75555667999999999999888888888877665 3467877655333
No 101
>PRK10091 MFS transport protein AraJ; Provisional
Probab=98.85 E-value=4.7e-08 Score=100.42 Aligned_cols=182 Identities=9% Similarity=-0.008 Sum_probs=132.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhh
Q 012185 236 LPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRW 315 (469)
Q Consensus 236 mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ 315 (469)
|++.++.++...+...++-+.+.-..+.+..| |+-++ .+ . .+....+.+...+.+.+.+++.||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~g~s~---------~~----~-g~~~s~~~~~~~~~~~~~g~l~dr 64 (382)
T PRK10091 1 MKKVILSLALGTFGLGMAEFGIMGVLTELAHD--VGISI---------PA----A-GHMISYYALGVVVGAPIIALFSSR 64 (382)
T ss_pred CcchHHHHHHHHHHHHhhHHHHHhChHHHHHH--cCCCH---------HH----H-hHHHHHHHHHHHHHHHHHHHHHcc
Confidence 56778888888888877766666666665544 33221 11 1 245556777888889999999999
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCC
Q 012185 316 IGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSG 395 (469)
Q Consensus 316 ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~ 395 (469)
+|||+++.++.++.+++.+..++.. +.+..++.-.+.|++.+.......++++|..|++
T Consensus 65 ~g~r~~~~~~~~~~~~~~~l~~~~~--------------------~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~- 123 (382)
T PRK10091 65 YSLKHILLFLVALCVIGNAMFTLSS--------------------SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPG- 123 (382)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHhC--------------------cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChH-
Confidence 9999999999988887766555443 2455666667788888876666667888888765
Q ss_pred CCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccCCC
Q 012185 396 GGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLS 457 (469)
Q Consensus 396 ~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpet~ 457 (469)
+++..+|+......+++.+.+...+.+.+..| ..++|.+.++.+++..+..++.+||.+
T Consensus 124 -~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g--wr~~f~~~~~~~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 124 -KVTAAVAGMVSGMTVANLLGIPLGTYLSQEFS--WRYTFLLIAVFNIAVLASIYFWVPDIR 182 (382)
T ss_pred -HhhHHHHHHHHHHHHHHHHhccHHHHHhhhcc--HHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 56778999998888888887766666655444 346788888877777776667788864
No 102
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=98.85 E-value=1.7e-08 Score=105.14 Aligned_cols=142 Identities=15% Similarity=0.145 Sum_probs=106.3
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
+.+.++.+...+..++.+++.||+|||+++..+.++++++.....+.. +....++.-.+.
T Consensus 55 ~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~--------------------~~~~l~~~r~l~ 114 (413)
T PRK15403 55 ASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTT--------------------SMTQFLIARFIQ 114 (413)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcC--------------------CHHHHHHHHHHH
Confidence 455566677788888999999999999999999888887766555442 244455555666
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhc
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLK 452 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~ 452 (469)
|++.+....+.++++.|..|++ .+++.+|+.+....+...+.+.+.+.+.+..| ..+.|++.++.++++.+..++.
T Consensus 115 Gi~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~g--w~~~f~~~~~~~~i~~~~~~~~ 190 (413)
T PRK15403 115 GTSICFIATVGYVTVQEAFGQT--KGIKLMAIITSIVLVAPIIGPLSGAALMHFVH--WKVLFAIIAVMGLIAFVGLLLA 190 (413)
T ss_pred HHHHHHHHHHHHHHHHHhcCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHh
Confidence 7766655566678888998875 56777999999999998888777766665444 3467888888888887766677
Q ss_pred ccCCCC
Q 012185 453 LPHLSS 458 (469)
Q Consensus 453 vpet~g 458 (469)
+|||+.
T Consensus 191 lp~~~~ 196 (413)
T PRK15403 191 MPETVK 196 (413)
T ss_pred CCCCcc
Confidence 898764
No 103
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=98.85 E-value=6.4e-08 Score=96.85 Aligned_cols=176 Identities=18% Similarity=0.145 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHH
Q 012185 243 VLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVW 322 (469)
Q Consensus 243 l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~ 322 (469)
+++..++..++...+....+.++.++ ++-++ . ..| +...++.+...+.+.+.+++.||+|||+++
T Consensus 1 L~l~~~~~~~~~~~~~~~~~~~~~~~-~~~s~----------~---~~~-~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l 65 (352)
T PF07690_consen 1 LFLAFFLSGFGFSIISPALPLYLAEE-LGLSP----------S---QIG-LLFSAFFLGSALFSPFAGYLSDRFGRRRVL 65 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-HHHCC-STTTS----------H---CHH-HHHHHHHHHHHHHHHHHHHHHHHS-HHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHc-cCCCH----------H---HHH-HHHHHHHHHHHHHHHHHHHHHHHcCCeeeE
Confidence 35667777777666666666444432 34332 1 122 445567778899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCCccchh
Q 012185 323 AISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAI 402 (469)
Q Consensus 323 ~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~ 402 (469)
.++.++.+++.....+.. +.+..++...+.|++.+.......+++.|..|++ ++++.+
T Consensus 66 ~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~--~~~~~~ 123 (352)
T PF07690_consen 66 IIGLLLFALGSLLLAFAS--------------------NFWLLLIARFLLGIGSGFFSPASNALIADWFPPE--ERGRAF 123 (352)
T ss_dssp HHHHHHHHHHHHHHHHHC--------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTC--CHHHHH
T ss_pred eehhhhhhhHHHHhhhhh--------------------hHHHHhhhccccccccccccccccccccccchhh--hhhhcc
Confidence 999999988743333222 1346677777889999988899999999999985 688889
Q ss_pred hHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccCCC
Q 012185 403 GVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLS 457 (469)
Q Consensus 403 gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpet~ 457 (469)
|+.+....++.++.+...+.+.+..| ....|.+.++..++++++...+.++++
T Consensus 124 ~~~~~~~~~g~~~g~~l~~~l~~~~~--~~~~~~~~~~~~~~~~il~~~~~~~~~ 176 (352)
T PF07690_consen 124 GILSAGFSLGSILGPLLGGFLISYFG--WRWAFLISAILSLIAAILFILFLPEPP 176 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCHCH--HCCHHHHHHHHHHHHHHHHHCCC---S
T ss_pred ccccchhhhhhhcccchhhhhhhccc--cccccccccchhhhhhhhHhhhhhhcc
Confidence 99999999999999988888876655 336788889888888875444544433
No 104
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.83 E-value=7.1e-08 Score=102.47 Aligned_cols=177 Identities=11% Similarity=0.051 Sum_probs=129.0
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhce-eecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhh
Q 012185 235 HLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGRE-VYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMC 313 (469)
Q Consensus 235 ~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~-vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~ 313 (469)
+.|+.++.++.++++.-++++.+..+.+.|+.+. .++-++ -+ .| +.+..+++...+.+++.+++.
T Consensus 7 ~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~---------~~----ag-~~~~~~~~~~~~~~~~~G~la 72 (475)
T TIGR00924 7 GHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQ---------EQ----AF-IIFGAYSALVYLLTSVGWWFG 72 (475)
T ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCH---------HH----HH-HHHHHHHHHHHHHHhhHHHHH
Confidence 4699999999999988888888888888887552 122110 11 22 445567778889999999999
Q ss_pred hh-cCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhcccc
Q 012185 314 RW-IGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTA 392 (469)
Q Consensus 314 ~~-ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p 392 (469)
|| +|||++..++.++.+++.+.+++.. +.+..++...+.|++.+.......+++++.+|
T Consensus 73 Dr~~G~~~~l~~~~~~~~~g~~~~~~~~--------------------~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~ 132 (475)
T TIGR00924 73 DRVWGTKKTMVLGGIVLMLGHFMLAMSI--------------------YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYE 132 (475)
T ss_pred HhhcchHHHHHHHHHHHHHHHHHHHhcc--------------------cHhHHHHHHHHHHhccccccCCHHHHHHHhcC
Confidence 99 8999999999998888776555432 12334445556788888777777789999998
Q ss_pred CCC-CCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHH
Q 012185 393 DSG-GGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGV 447 (469)
Q Consensus 393 ~~~-~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai 447 (469)
+++ +.++...++.+....+..++.+.+.+.+.+..| ....|.+.++..+++.+
T Consensus 133 ~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g--~~~~f~~~~~~~~~~~l 186 (475)
T TIGR00924 133 RGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYG--YHVGFNLAAVGMVIGLL 186 (475)
T ss_pred CCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcC--hHHHHHHHHHHHHHHHH
Confidence 653 346677999999999999999888888776555 34678777776666544
No 105
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=98.82 E-value=8.2e-08 Score=98.15 Aligned_cols=178 Identities=12% Similarity=0.073 Sum_probs=124.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchH
Q 012185 241 HVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRL 320 (469)
Q Consensus 241 ~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~ 320 (469)
..+++..+...+.+..+....+.+..+ |+-++ . ..| +...++.+...+.+.+.+++.||+|||+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~s~----------~---~~g-~~~~~~~~~~~~~~~~~G~l~Dr~g~r~ 78 (405)
T TIGR00891 15 SAAWLGWLLDAFDFFLVALVLAEVAGE--FGLTT----------V---DAA-SLISAALISRWFGALMFGLWGDRYGRRL 78 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCCh----------h---hHH-HHHHHHHHHHHHHHHHHHHHHHHhccHH
Confidence 334556666666666666666665443 43321 1 122 3444566778888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCCccc
Q 012185 321 VWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGL 400 (469)
Q Consensus 321 l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~ 400 (469)
++..+.++.+++.+...+.. +....++...+.|++.+.......+++.|..|++ ++|.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~--------------------~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~--~~~~ 136 (405)
T TIGR00891 79 PMVTSIVLFSAGTLACGFAP--------------------GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKH--LRNK 136 (405)
T ss_pred HHHHHHHHHHHHHHHHHHhc--------------------cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChh--hhhH
Confidence 99999888877666555443 2444556667788888888888888999999876 6788
Q ss_pred hhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccCCC
Q 012185 401 AIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLS 457 (469)
Q Consensus 401 ~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpet~ 457 (469)
.+|+.+....+.+++.+...+.+.+..|......|.+.++..++.. +....+||++
T Consensus 137 ~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~-~~~~~~~~~~ 192 (405)
T TIGR00891 137 ASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFAL-WLRKNIPEAE 192 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH-HHHHhCCCCh
Confidence 8999999999999998887777666554333456777666555543 3566778864
No 106
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.82 E-value=3.3e-08 Score=84.82 Aligned_cols=136 Identities=20% Similarity=0.233 Sum_probs=105.9
Q ss_pred HHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccch
Q 012185 297 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPL 376 (469)
Q Consensus 297 i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~ 376 (469)
.+++...+.+.+.+++.||+|||+.+..+....++++....+.. +.+...+...+.|++.
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~g~~~ 65 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSS--------------------NITVLIIARFLQGFGA 65 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhc--------------------cHHHHHHHHHHHHHHH
Confidence 34566777888999999999999999988887777665444332 2444556667788888
Q ss_pred hhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccCC
Q 012185 377 AITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL 456 (469)
Q Consensus 377 a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpet 456 (469)
+.......+++.|..|++ .+|+.+|+.+....+.+.+.+...+.+.+..+ ....+.+.++..+++.+...+..|||
T Consensus 66 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (141)
T TIGR00880 66 AFALVAGAALIADIYPPE--ERGVALGLMSAGIALGPLLGPPLGGVLAQFLG--WRAPFLFLAILALAAFILLAFLLPET 141 (141)
T ss_pred HHHHHhHHHHHHHHCChh--hhhHHHHHHHHhHHHHHHHhHHhHHHHhcccc--hHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 888888888999999876 67888999999999999999988888776554 23578888888888888777777875
No 107
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=98.81 E-value=4e-08 Score=98.70 Aligned_cols=181 Identities=10% Similarity=0.016 Sum_probs=128.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchH
Q 012185 241 HVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRL 320 (469)
Q Consensus 241 ~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~ 320 (469)
|.++..+++..++........+.|+.+ ++.++ ...| +...++.+...+.+.+.+++.||+|||+
T Consensus 2 ~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~-------------~~~g-~~~~~~~~~~~i~~~~~G~l~dr~g~r~ 65 (365)
T TIGR00900 2 RLLFAAQLISLIGTAITQVALPLYVLA--GTGSA-------------SVLS-LAALAGMLPYVVLSPIAGALADRYDRKK 65 (365)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHHHH--hhccH-------------HHHH-HHHHHHHHHHHHHHHhhhHHHHhhchhH
Confidence 346777888888777777777766654 22221 1122 4555677888889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCCccc
Q 012185 321 VWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGL 400 (469)
Q Consensus 321 l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~ 400 (469)
++..+.++.+++.+...+..... ..+.+..++...+.|++.+.....-.++++|..|++ ++|.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~--~~~~ 128 (365)
T TIGR00900 66 VMIGADLIRAVLVAVLPFVALLG---------------GLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEE--QLTQ 128 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcC---------------CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH--HHHH
Confidence 99999888777666555544210 002455566667788888877777778999999876 6788
Q ss_pred hhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhc-ccCC
Q 012185 401 AIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLK-LPHL 456 (469)
Q Consensus 401 ~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~-vpet 456 (469)
.+|+.+....+++++.+.+.+.+.+..| ....|.+.++..+++.++.+.. .||.
T Consensus 129 ~~~~~~~~~~~g~~~g~~l~~~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (365)
T TIGR00900 129 ANSLSQAVRSLFYIVGPGIGGLMYATLG--IKWAIWVDAVGFAISALLIVSVRIPEL 183 (365)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHHhcccccC
Confidence 8999999999999998888887776655 3356777777777666544433 4443
No 108
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=98.80 E-value=8e-08 Score=97.74 Aligned_cols=144 Identities=15% Similarity=0.141 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
+...++.+...+.+.+.+++.||+|||+.+..+.++.+++.+...+.. +.+..++...+.
T Consensus 44 ~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~l~ 103 (385)
T TIGR00710 44 MTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSN--------------------NIETLLVLRFVQ 103 (385)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHc--------------------cHHHHHHHHHHH
Confidence 455567777888899999999999999999999888877766555443 244555666778
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhc
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLK 452 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~ 452 (469)
|++.+.....-.+++.|..|++ .+|+.+|+.+....+.+.+.+...+.+.+..| ....|.+.++..++.++..++.
T Consensus 104 g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 179 (385)
T TIGR00710 104 AFGASAGSVISQALVRDIYPGE--ELSRIYSILMPVLALAPAVAPLLGGYILVWLS--WHAIFAFLSLAGILLSALIFFI 179 (385)
T ss_pred HcchhHHHHHHHHHHHHhcCcH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHHHHh
Confidence 8888888777788999999865 67888999999999999998888887766554 3456777777777777767777
Q ss_pred ccCCCCCC
Q 012185 453 LPHLSSNS 460 (469)
Q Consensus 453 vpet~g~~ 460 (469)
.||++.+.
T Consensus 180 ~~~~~~~~ 187 (385)
T TIGR00710 180 LPETLPYE 187 (385)
T ss_pred CCCCCCCc
Confidence 88876543
No 109
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.77 E-value=1.5e-07 Score=100.69 Aligned_cols=185 Identities=10% Similarity=0.022 Sum_probs=126.3
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhh
Q 012185 235 HLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCR 314 (469)
Q Consensus 235 ~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~ 314 (469)
+.|+.++.++...++..++++.+..+.+.|+.++ ++-++ .+. .+....+.........+.+++.|
T Consensus 18 ~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~-lg~s~----------~~a----~~~~~~~~~~~~~~~~~~G~LaD 82 (500)
T PRK09584 18 KQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQ-LGMSE----------ADS----ITLFSSFSALVYGLVAIGGWLGD 82 (500)
T ss_pred cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCH----------HHH----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 4688899999999999999999999999888653 33221 111 12222233333444567899999
Q ss_pred h-cCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccC
Q 012185 315 W-IGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTAD 393 (469)
Q Consensus 315 ~-ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~ 393 (469)
| +|||+++.++.++++++...+.+.. + .....++...+.|++.+.....+.++++|.+|+
T Consensus 83 r~~G~r~~~~~g~~~~~ig~~l~~~~~----~---------------~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~ 143 (500)
T PRK09584 83 KVLGTKRVIMLGAIVLAIGYALVAWSG----H---------------DAGIVYMGMATIAVGNGLFKANPSSLLSTCYEK 143 (500)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHhc----c---------------cHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCC
Confidence 9 5999999999998888765555432 1 122333444567788887777777899999986
Q ss_pred CCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHH---HHhhhcccC
Q 012185 394 SGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGG---VVATLKLPH 455 (469)
Q Consensus 394 ~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaa---i~~~~~vpe 455 (469)
++++++..+++.+....+...+.+.+.|.+.+..| ..+.|.+.++..+++. ++....++|
T Consensus 144 ~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g--~~~~F~i~~i~~~i~~i~~~~~~~~~~~ 206 (500)
T PRK09584 144 DDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYG--WSVAFALSVVGMLITVVNFAFCQRWVKQ 206 (500)
T ss_pred CchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHHhHHHhcc
Confidence 54445556889999999999998888888877665 3467888776444433 333444554
No 110
>PRK10504 putative transporter; Provisional
Probab=98.77 E-value=8.3e-08 Score=101.25 Aligned_cols=183 Identities=10% Similarity=0.005 Sum_probs=131.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCc
Q 012185 239 AMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGS 318 (469)
Q Consensus 239 ~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~ 318 (469)
.++.++...|+..+....+....+.+..+ ++.++ + ..| +....+.+...+...+.+++.||+||
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~g~s~----------~---~~~-~~~~~~~~~~~~~~~~~g~l~d~~g~ 74 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQS--LGESP----------L---HMH-MVIVSYVLTVAVMLPASGWLADRVGV 74 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHH--hCcCH----------H---HHH-HHHHHHHHHHHHHHHHHHHHHHHhch
Confidence 35556777777777666666667776654 44331 1 122 44455667777888899999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCCc
Q 012185 319 RLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQ 398 (469)
Q Consensus 319 r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~ 398 (469)
|++++.+.++++++.+...+.. +....++.-.+.|++.+.....-.+++.|+.|++ .+
T Consensus 75 r~~~~~~~~~~~~~~~~~~~~~--------------------~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~--~~ 132 (471)
T PRK10504 75 RNIFFTAIVLFTLGSLFCALSG--------------------TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPRE--QY 132 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC--------------------CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHH--HH
Confidence 9999998888877665544332 2444556677788888877766677889999875 56
Q ss_pred cchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccCCCCCCc
Q 012185 399 GLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSSNSF 461 (469)
Q Consensus 399 G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpet~g~~~ 461 (469)
|..+|+.+....++..+.+.+.|.+.+..| ..+.|.+...+++++.+......|+.+.++.
T Consensus 133 ~~~~~~~~~~~~~g~~~g~~~~g~l~~~~g--w~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~ 193 (471)
T PRK10504 133 MAAMTFVTLPGQVGPLLGPALGGLLVEYAS--WHWIFLINIPVGIIGAIATLMLMPNYTMQTR 193 (471)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHhhcc--HHHHHHHHHHHHHHHHHHHHHhCCCccccCC
Confidence 888999999988998888888887776554 3467888877777777767777777655443
No 111
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=98.76 E-value=8.7e-08 Score=99.13 Aligned_cols=178 Identities=13% Similarity=0.096 Sum_probs=124.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhh
Q 012185 236 LPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRW 315 (469)
Q Consensus 236 mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ 315 (469)
|+|.++.+++.++++-++-..+......++.+ ++.++ . .. .+....+.+...+.+.+.+++.||
T Consensus 1 ~~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~-----------~--~~-~~~~~~~~l~~~l~~~~~G~laDr 64 (393)
T PRK11195 1 MSKGFYAIMAAQFFSALADNALLFAAIALLKE--LHYPD-----------W--SQ-PLLQMFFVLAYIVLAPFVGAFADS 64 (393)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCcH-----------H--HH-HHHHHHHHHHHHHHHhhhhHhhhc
Confidence 45678888999998877644444444444432 22221 1 12 256667778888889999999999
Q ss_pred cCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCC
Q 012185 316 IGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSG 395 (469)
Q Consensus 316 ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~ 395 (469)
+|||+++.++.++++++.+..++.. +. ++.-.+.|++-+.......+++.|++|++
T Consensus 65 ~grr~vl~~~~~~~~~~~~~~~~~~--------------------~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~- 120 (393)
T PRK11195 65 FPKGRVMFIANGIKLLGCLLMLFGI--------------------HP---LLAYGLVGIGAAAYSPAKYGILTELLPGE- 120 (393)
T ss_pred cCCchhhHHHHHHHHHHHHHHHHHH--------------------HH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHH-
Confidence 9999999999998877655433322 12 23345678888888888899999999976
Q ss_pred CCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccCCCC
Q 012185 396 GGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSS 458 (469)
Q Consensus 396 ~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpet~g 458 (469)
++++.+|+.+....+.+++.+...|.+.+.. ....+.+.+++.+++.+ ..+.+||.+.
T Consensus 121 -~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~---~~~~~~i~~~~~~~~~~-~~~~l~~~~~ 178 (393)
T PRK11195 121 -KLVKANGWMEGSTIAAILLGTVLGGALADPH---AEAALAVCALIYLLAAL-FNLFIPRLGA 178 (393)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH-HHhcCCCCcc
Confidence 6788899999999999999998888876542 22344444444444443 5567887653
No 112
>TIGR00895 2A0115 benzoate transport.
Probab=98.76 E-value=1.4e-07 Score=96.01 Aligned_cols=140 Identities=17% Similarity=0.153 Sum_probs=107.3
Q ss_pred HHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhc
Q 012185 294 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLG 373 (469)
Q Consensus 294 ~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 373 (469)
...++.+...+.+.+.+++.||+|||+++..+.++.+++.+...+.. +....++...+.|
T Consensus 57 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~g 116 (398)
T TIGR00895 57 LFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALAT--------------------NVTQLLILRFLAG 116 (398)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHcc--------------------chHHHHHHHHHHh
Confidence 34456667788889999999999999999999888877665554432 2444556677789
Q ss_pred cchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcc
Q 012185 374 FPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKL 453 (469)
Q Consensus 374 i~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~v 453 (469)
++.+.......++++|..|++ .+|+.+|+.+....+.+++.+...+.+.+..|- ...|.+.++..++..+.....+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~--~~~~~~~~~~~~~~~~~~~~~~ 192 (398)
T TIGR00895 117 LGLGGLMPNLNALVSEYAPKR--FRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGW--RSLFYVGGIAPLLLLLLLMRFL 192 (398)
T ss_pred cccccchhhHHHHHHHHcCHH--hhchhHhhHhhHHHHHHHHHHHHHHHHhhcccc--eeehhhhhhHHHHHHHHHHHhC
Confidence 999888888889999999875 578889999999999999999888887766552 3567777666666666566777
Q ss_pred cCCC
Q 012185 454 PHLS 457 (469)
Q Consensus 454 pet~ 457 (469)
||+.
T Consensus 193 ~~~~ 196 (398)
T TIGR00895 193 PESI 196 (398)
T ss_pred CCCC
Confidence 8764
No 113
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=98.74 E-value=1.2e-07 Score=100.00 Aligned_cols=177 Identities=13% Similarity=0.086 Sum_probs=129.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHH
Q 012185 242 VVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLV 321 (469)
Q Consensus 242 ~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l 321 (469)
.+++..++..+.........+++..+ ++.++ + ..| |....+.+...+...+.+++.||+|||++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~p~~~~~--~g~s~----------~---~~~-~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 69 (485)
T TIGR00711 6 VLMLGTFMAVLDSTIVNVAIPTIAGD--LGSSL----------S---QVQ-WVITSYMLANAISIPLTGWLAKRFGTRRL 69 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCh----------h---hhh-HHHHHHHHHHHHHHHhHHHHHHHhCcHHH
Confidence 34556666666655556666665544 44331 1 122 55667778888889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCCccch
Q 012185 322 WAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLA 401 (469)
Q Consensus 322 ~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~ 401 (469)
+.++.++++++....++.. +....++...+.|++.+.....-.+++.|..|++ .+|..
T Consensus 70 ~~~~~~~~~~~~~~~~~~~--------------------~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~--~r~~~ 127 (485)
T TIGR00711 70 FLISTFAFTLGSLLCGVAP--------------------NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPE--KRGRA 127 (485)
T ss_pred HHHHHHHHHHHHHHHhCcC--------------------CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHH--HHHHH
Confidence 9999988887665544332 2445566777788888887777788999999875 67888
Q ss_pred hhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccCCCC
Q 012185 402 IGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSS 458 (469)
Q Consensus 402 ~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpet~g 458 (469)
+|+.++...+.+.+.+...+.+.+..| ..+.|++.+...+++.++..+..||++.
T Consensus 128 ~~~~~~~~~~g~~~g~~~~~~l~~~~~--w~~~f~~~~~~~~~~~~~~~~~~~~~~~ 182 (485)
T TIGR00711 128 MAIWGLTVLVAPALGPTLGGWIIENYH--WRWIFLINVPIGIIVVVVAFFILPRDKP 182 (485)
T ss_pred HHHHHHHHHHHhhhhhccHhHhccCcC--ceehhhhhhHHHHHHHHHHHHHcCCccc
Confidence 999999999999998888887776555 3467888887777777767777787654
No 114
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=98.73 E-value=7.4e-07 Score=94.72 Aligned_cols=142 Identities=15% Similarity=0.044 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHHhHH----Hhhhh-cCchHHH--HHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHH
Q 012185 295 LLLNSVVLGVSSFLIE----PMCRW-IGSRLVW--AISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLV 367 (469)
Q Consensus 295 l~i~~iv~~i~s~i~~----~l~~~-ig~r~l~--~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (469)
..++++..++..-++. ++.|| .+.+... .+|.++.+++++.+++.....+++ . ..+.+..+.
T Consensus 318 ~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~----~-------~~s~~~~i~ 386 (475)
T TIGR00924 318 QSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAG----G-------LTSPWFMVL 386 (475)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCC----C-------ccCHHHHHH
Confidence 3345555555444433 33343 2233333 678888888887766543211100 0 013555666
Q ss_pred HHHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHH
Q 012185 368 VFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGV 447 (469)
Q Consensus 368 ~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai 447 (469)
...+.|++-......-.+++++..|++ .+|.++|+..+...+.+.+.+..........| ....|..-++..++.++
T Consensus 387 ~~~~~~~ge~~~~p~~~~~~~~~aP~~--~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 462 (475)
T TIGR00924 387 IYLFQTLGELMISPLGLSWWTKIAPQR--LMGQMLGMWFLAQAMGSLLGGYLATFGAVPQG--VTGVFGKIGLVTLLVGV 462 (475)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHhCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--hhhHHHHHHHHHHHHHH
Confidence 777788888888888889999999986 78999999999999999998876665443322 22345555554554444
Q ss_pred Hhhh
Q 012185 448 VATL 451 (469)
Q Consensus 448 ~~~~ 451 (469)
..++
T Consensus 463 ~~~~ 466 (475)
T TIGR00924 463 VMAL 466 (475)
T ss_pred HHHH
Confidence 3433
No 115
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=98.73 E-value=2.2e-07 Score=95.51 Aligned_cols=180 Identities=10% Similarity=0.032 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCch
Q 012185 240 MHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSR 319 (469)
Q Consensus 240 l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r 319 (469)
++......+++-.|...+..+.+++..+ ++.+ +. ..| +...++.+...+...+.+++.||+|||
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~--~~~s------------~~-~~~-~~~~~~~~~~~~~~~~~G~l~Dr~g~r 68 (392)
T PRK10473 5 LLCSFALVLLYPAGIDMYLVGLPRIAAD--LNAS------------EA-QLH-IAFSVYLAGMAAAMLFAGKIADRSGRK 68 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHH--hCCC------------HH-HHH-HHHHHHHHHHHHHHHhHhHHHHHhCCh
Confidence 3434444555566666666666655443 3322 10 122 444556666777888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCCcc
Q 012185 320 LVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQG 399 (469)
Q Consensus 320 ~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G 399 (469)
+.+..+.++++++.....+.. +....++...+.|++.+....+.++++.|..|++ .++
T Consensus 69 ~~l~~~~~~~~i~~~~~~~~~--------------------~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~--~r~ 126 (392)
T PRK10473 69 PVAIPGAALFIIASLLCSLAE--------------------TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDR--RRA 126 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHhC--------------------cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHH--HHH
Confidence 999999888877665544332 1333444556678888877777888999999875 577
Q ss_pred chhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccCCCCC
Q 012185 400 LAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSSN 459 (469)
Q Consensus 400 ~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpet~g~ 459 (469)
..+|+.+....+..++.+...+.+.+..| ....|.+.++.+++.++++.+.+||++.+
T Consensus 127 ~~~~~~~~~~~i~~~~~~~i~~~l~~~~g--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 184 (392)
T PRK10473 127 KVLSLLNGITCIIPVLAPVLGHLIMLKFP--WQSLFYTMAAMGILVLLLSLFILKETRPA 184 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCcC--hHHHHHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 88999998888877777766666555444 33567888887887777777778887644
No 116
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=98.72 E-value=2e-07 Score=97.11 Aligned_cols=144 Identities=15% Similarity=-0.002 Sum_probs=109.1
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
+...++.+...+.+++.+++.||+|||+++..+.++++++.+.+++.. +.+..++.-.+.
T Consensus 47 ~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~--------------------~~~~l~~~r~l~ 106 (412)
T TIGR02332 47 LAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFAT--------------------GPESLYLLRILV 106 (412)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhc--------------------CHHHHHHHHHHH
Confidence 444556677788889999999999999999999999988777666543 244555666678
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecc---c-CccchHHHHHHHHHHHHHHH
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALF---G-GGNIPAFVLASLSALAGGVV 448 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~---g-~~~~~~f~~~~v~~liaai~ 448 (469)
|++.+.......++++|..|++ .+|+.+|+.+....+.+++.+.+.+.+.+.. + .+..++|.+.++.+++.+++
T Consensus 107 G~~~~~~~~~~~~~~~~~~~~~--~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~ 184 (412)
T TIGR02332 107 GIAEAGFLPGILLYLTFWFPAY--FRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVM 184 (412)
T ss_pred HHHHhhHHHHHHHHHHHHcCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHH
Confidence 8888877666667889999875 5788899999999999988887777665321 1 12457888888888877776
Q ss_pred hhhcccCCCC
Q 012185 449 ATLKLPHLSS 458 (469)
Q Consensus 449 ~~~~vpet~g 458 (469)
.++++||++.
T Consensus 185 ~~~~~~~~p~ 194 (412)
T TIGR02332 185 TWFWLDDSPD 194 (412)
T ss_pred HhhccCCCcc
Confidence 7788888764
No 117
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.72 E-value=4.1e-07 Score=93.96 Aligned_cols=292 Identities=13% Similarity=0.119 Sum_probs=167.3
Q ss_pred HhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHH
Q 012185 56 LDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVV 135 (469)
Q Consensus 56 lD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i 135 (469)
+.+..|+.-....||..... ++.+-=++-..++.++|-.++..+++.+ +.. +-...|.++..
T Consensus 114 l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~G~L-----~~i-----------~p~~~fwi~s~ 175 (412)
T PF01306_consen 114 LGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLAGIL-----FNI-----------NPNIIFWIASA 175 (412)
T ss_dssp TTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHHHHH-----HHH-----------HHHHHHHHHHH
T ss_pred HHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHhhee-----eee-----------CccHHHHHHHH
Confidence 45555666666777776664 4445667888888888888887777652 110 12345665554
Q ss_pred HHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccC
Q 012185 136 FLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTN 215 (469)
Q Consensus 136 ~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (469)
..++..++.++.-||++...+..+.. .+
T Consensus 176 ~~~il~lll~~~~~~~~~~~~~~~~~-------------------------------------------------~~--- 203 (412)
T PF01306_consen 176 AAIILLLLLLLLKPDVPPQAEVADAL-------------------------------------------------GA--- 203 (412)
T ss_dssp HHHHHHHHHHSS---SSSSS-SSTTS-------------------------------------------------SS---
T ss_pred HHHHHHHHHHHcCCcCchhhhhhccc-------------------------------------------------cc---
Confidence 44333333333334433221111000 00
Q ss_pred CCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhH-HHHHH
Q 012185 216 GSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVR-EGAFG 294 (469)
Q Consensus 216 ~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~-~G~~~ 294 (469)
++...+++++++-+ ++ |.+|.+.+.....+..+..+=..++.|..+ .|+. -++|.+ .| ..
T Consensus 204 ----~~~~~~~~~~~~l~-k~-~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~-~f~~-----------~~~g~~~~G-~l 264 (412)
T PF01306_consen 204 ----KKDKVSLKDVLSLF-KM-RNFWFFVLFVIGVAAIYDVFDQQFPIYFAS-FFQS-----------AGQGNQMYG-YL 264 (412)
T ss_dssp ----------HHHHHHHT-TS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TSSS-----------HHHHHHHHH-HH
T ss_pred ----CCCCCcHHHHHHHh-cc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hhcc-----------cccChhHHh-HH
Confidence 00122455555443 23 456665554455555555554334444332 2331 123333 23 22
Q ss_pred HHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhcc
Q 012185 295 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGF 374 (469)
Q Consensus 295 l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi 374 (469)
..+.-+.-++.=++.|++.+|+|.|+.++++..++++=..+.++.+ +++.+...=.+-|+
T Consensus 265 ~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~--------------------~~~~i~~~klLH~~ 324 (412)
T PF01306_consen 265 WSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFAT--------------------NPWVISLIKLLHAL 324 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT----------------------SHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhc--------------------chHHHHHHHHHHHH
Confidence 2234445566667789999999999999998887777666655554 25566666677777
Q ss_pred chhhhccccchhhhccccCCCCCccchhhH-HHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcc
Q 012185 375 PLAITYSVPFAITAELTADSGGGQGLAIGV-LNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKL 453 (469)
Q Consensus 375 ~~a~~~~vP~aLise~~p~~~~~~G~~~gi-~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~v 453 (469)
..+....-.+-.+++..|++ -..+...+ .+++..+.+++.+...|.+-+..|.+ .+|.+-|...++..+.+.+.+
T Consensus 325 e~~l~lva~fkYI~~~fd~r--lsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~--~tylimg~iv~~~~li~~f~l 400 (412)
T PF01306_consen 325 EFPLLLVAAFKYITAHFDKR--LSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQ--HTYLIMGLIVLPFTLISAFTL 400 (412)
T ss_dssp HHHHHHHHHHHHHHHHS-GG--GHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhCCHh--HHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcH--HHHHHHHHHHHHHHHHheeee
Confidence 77777666777888888864 55555566 57899999999999999999888743 466666666777777787777
Q ss_pred cCCCCCC
Q 012185 454 PHLSSNS 460 (469)
Q Consensus 454 pet~g~~ 460 (469)
++.|..+
T Consensus 401 ~~~~~~~ 407 (412)
T PF01306_consen 401 KKDKKQI 407 (412)
T ss_dssp --SSSTT
T ss_pred cCCCccc
Confidence 7776644
No 118
>PRK03545 putative arabinose transporter; Provisional
Probab=98.71 E-value=2.6e-07 Score=95.07 Aligned_cols=142 Identities=15% Similarity=0.107 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
+....+.+...+.+.+.+++.||+|||+++..+.++++++.+.+.+.. +.+..++.-.+.
T Consensus 48 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--------------------~~~~l~~~r~~~ 107 (390)
T PRK03545 48 LMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAW--------------------NFTVLLISRIGI 107 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhc--------------------cHHHHHHHHHHH
Confidence 444556677778888899999999999999999988888776665543 244455555667
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhc
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLK 452 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~ 452 (469)
|++.+....+..+++++..|++ ++|+.+|+.+....+++.+.+...+.+.+..| ..+.|.+.++++++..++....
T Consensus 108 G~~~~~~~~~~~~~i~~~~~~~--~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~g--w~~~f~~~~~~~~l~~~~~~~~ 183 (390)
T PRK03545 108 AFAHAIFWSITASLAIRVAPAG--KKAQALSLLATGTALAMVLGLPLGRVIGQYLG--WRTTFLAIGGGALITLLLLIKL 183 (390)
T ss_pred HHHHHHHHHHHHHHHHHhCChh--hhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHh
Confidence 8877776666678999999876 57888999999999999988887777766555 3467888888888777766666
Q ss_pred ccCCCC
Q 012185 453 LPHLSS 458 (469)
Q Consensus 453 vpet~g 458 (469)
+||.+.
T Consensus 184 ~~~~~~ 189 (390)
T PRK03545 184 LPLLPS 189 (390)
T ss_pred CCCCCC
Confidence 776543
No 119
>PRK11663 regulatory protein UhpC; Provisional
Probab=98.70 E-value=2.6e-07 Score=96.79 Aligned_cols=140 Identities=16% Similarity=0.110 Sum_probs=102.3
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
+....+.+...+.+.+.+++.||+|||+++.++.++.+++.+...+.. +.+..++...+.
T Consensus 62 ~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--------------------~~~~l~~~~~l~ 121 (434)
T PRK11663 62 LLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSS--------------------SLWAFALLWVLN 121 (434)
T ss_pred HHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHh--------------------HHHHHHHHHHHH
Confidence 444567778888899999999999999999999998888776555543 133333444445
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhc
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLK 452 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~ 452 (469)
|+..+.......++++|..|++ .+|+.+|+.+....++.++.+.+.+.+.+..| ..+.|.+.++..++.++...++
T Consensus 122 g~~~g~~~~~~~~~~~~~~~~~--~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~g--w~~~f~~~~i~~~~~~~~~~~~ 197 (434)
T PRK11663 122 AFFQGWGWPVCAKLLTAWYSRT--ERGGWWAIWNTAHNVGGALIPLVVGAIALHYG--WRYGMMIAGIIAIVVGLFLCWR 197 (434)
T ss_pred HHHHHccchHHHHHHHHhCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc--HHHHHHHHHHHHHHHHHHHHHH
Confidence 6666654445567889999875 67888999999999999998888887776555 3467877777766666555556
Q ss_pred ccCC
Q 012185 453 LPHL 456 (469)
Q Consensus 453 vpet 456 (469)
+||+
T Consensus 198 ~~~~ 201 (434)
T PRK11663 198 LRDK 201 (434)
T ss_pred cCCC
Confidence 6654
No 120
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=98.70 E-value=2.7e-07 Score=95.47 Aligned_cols=142 Identities=16% Similarity=0.110 Sum_probs=110.0
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
+...++.+...+.+.+.+++.||+|||+++..+.++++++.+...+.. +.+..++.-.+.
T Consensus 59 ~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~--------------------~~~~l~~~r~l~ 118 (394)
T PRK10213 59 QSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFAN--------------------SFSLLLIGRACL 118 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHC--------------------hHHHHHHHHHHH
Confidence 334456677788889999999999999999999999988766554432 255566666778
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhc
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLK 452 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~ 452 (469)
|++.+....+..++++|+.|++ ++|..+|+.+....++..+.+...+.+.+..| ..++|.+.++.+++..++....
T Consensus 119 G~~~g~~~~~~~~~i~~~~~~~--~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~g--w~~~f~~~~~l~~~~~l~~~~~ 194 (394)
T PRK10213 119 GLALGGFWAMSASLTMRLVPPR--TVPKALSVIFGAVSIALVIAAPLGSFLGELIG--WRNVFNAAAVMGVLCIFWIIKS 194 (394)
T ss_pred HHhhHHHHHHHHHHHHHHcCHh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHHH
Confidence 9988887778888999999876 67888999999999999988888887776665 3467888777777766655566
Q ss_pred ccCCCC
Q 012185 453 LPHLSS 458 (469)
Q Consensus 453 vpet~g 458 (469)
+||+++
T Consensus 195 ~p~~~~ 200 (394)
T PRK10213 195 LPSLPG 200 (394)
T ss_pred CCCCCc
Confidence 888654
No 121
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.68 E-value=7.7e-08 Score=98.65 Aligned_cols=347 Identities=14% Similarity=0.101 Sum_probs=188.0
Q ss_pred HHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccc--hhhhhhcccchhhhcccchhHHHHH
Q 012185 54 WLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGS--WHRWFPFLTSRACCAACGNLKAAFL 131 (469)
Q Consensus 54 ~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~--w~~~~~~~~~~~~~~~~~~~~~~f~ 131 (469)
++|.+++..=..-+-+..+|.+..+.||.-.++.-.|.+.|.+.|-.+..+.. .++.++-- +.......-||..|.
T Consensus 152 ~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~--~~~~~ld~vWRl~~g 229 (538)
T KOG0252|consen 152 FLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGP--STYPHLDGVWRIIFG 229 (538)
T ss_pred HHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCC--CCchHHHHHHHHHHH
Confidence 45777776666556677789999999997777766677777777665554310 11111100 001112357999999
Q ss_pred HHHHHHHHHhhheeEEeeccCCCCCCC-CCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhcc
Q 012185 132 VAVVFLTLCALVTIYFADEVPLTVNQP-NHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKK 210 (469)
Q Consensus 132 i~~i~~~i~~~it~~~v~E~p~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (469)
+++++.+.++. .=+..||+++-..-. ++.+.|. ++.++ +++. ...+++. .
T Consensus 230 lg~vpa~~~ly-~Rl~M~Et~~Y~al~~~~~~~a~---~d~~k----~~~~---------------~~~~~~~------~ 280 (538)
T KOG0252|consen 230 LGAVPALLVLY-FRLKMPETARYTALVSKKLKQAA---GDMKK----VLSV---------------DIEAEST------A 280 (538)
T ss_pred HHHHHHHHHHH-hhhcCCcchhHHHHhhcCHhhhh---hcccc----cccc---------------ccchhhc------c
Confidence 99999976554 456788886543111 1111111 00000 0000 0000000 0
Q ss_pred ccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHH
Q 012185 211 AEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVRE 290 (469)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~ 290 (469)
+++ ....+.....|...+..+ | -+.+.-.|..-|+-=+++++..+|..+.+....+ .|.+++. +..| +.
T Consensus 281 -~~~-~~~~~~~~~~F~~~f~~~-h-g~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~--~~~~~~~-~~~~----~v 349 (538)
T KOG0252|consen 281 -ESD-VPPPSNSFGLFSRLFLRW-H-GKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGV--IPSANTY-HELF----KV 349 (538)
T ss_pred -ccC-CCCcccccchHHHHHHHH-H-HHHHHHHHHHHHhhhhhhhccccHHHHHHHhhcc--CCCcchH-HHHH----HH
Confidence 000 000000111233344332 1 1223333444444444777777777776554222 2322221 2233 23
Q ss_pred HHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHH
Q 012185 291 GAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFT 370 (469)
Q Consensus 291 G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (469)
+-+.+++.....+---.+...++|++|||.+-+.|.+++++.++.++... |...... +....+.+..+++
T Consensus 350 A~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y----~~~~~~~------Gf~v~y~l~~ff~ 419 (538)
T KOG0252|consen 350 AEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPY----NQLENTI------GFVVLYSLTFFFG 419 (538)
T ss_pred HHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCc----ccccccC------ceeehHHHHHHHH
Confidence 32333222211111233455688999999999999999988766555443 2111011 1112344444444
Q ss_pred HhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhcccccee-----cccCccchHHHHHHHHHHHH
Q 012185 371 LLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDA-----LFGGGNIPAFVLASLSALAG 445 (469)
Q Consensus 371 ~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~-----~~g~~~~~~f~~~~v~~lia 445 (469)
=+| +-+++. .+-+|.+|.. -+|++.||--.+--..-++....+.++.+ ..|. ..+|++.+.+++++
T Consensus 420 NFG-Pn~ttf----ivpaE~FPar--vR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~--~~v~~i~~~~~~~g 490 (538)
T KOG0252|consen 420 NFG-PNATTF----IVPAEIFPAR--VRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGV--RNVFIILAGCMLLG 490 (538)
T ss_pred hcC-CCceeE----EeehhhchHH--HhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccc--hHHHHHHHHHHHHh
Confidence 455 222232 3568999975 77888999888888888888888887776 4443 36899999999988
Q ss_pred HHHhhhcccCCCCCCcc
Q 012185 446 GVVATLKLPHLSSNSFR 462 (469)
Q Consensus 446 ai~~~~~vpet~g~~~~ 462 (469)
-+ ..+++|||||||..
T Consensus 491 i~-~T~l~pEtk~~~le 506 (538)
T KOG0252|consen 491 IL-FTLLIPETKGKSLE 506 (538)
T ss_pred Hh-eeEEeecccccCHH
Confidence 87 77888999999974
No 122
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=98.67 E-value=3.3e-07 Score=94.78 Aligned_cols=143 Identities=13% Similarity=0.037 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
+....+.+...+.+.+.+++.||+|||+++.++.++.+++.....+.. +.+..++...+.
T Consensus 52 ~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~--------------------~~~~l~~~~~l~ 111 (406)
T PRK15402 52 TSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQ--------------------SIEQFTLLRFLQ 111 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHc--------------------cHHHHHHHHHHH
Confidence 445567778888899999999999999999999888877766554432 134455556667
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhc
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLK 452 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~ 452 (469)
|++.+....+.++++.|..|++ .++..+++.+....+...+.+.+.+.+.+..| ..+.|.+.+++++++.+..++.
T Consensus 112 G~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~--w~~~~~~~~~~~~~~~~~~~~~ 187 (406)
T PRK15402 112 GIGLCFIGAVGYAAIQESFEEA--DAIKITALMANVALLAPLLGPLVGAALIHVLP--WRGMFVLFAALAALSFFGLWRA 187 (406)
T ss_pred HhHhhhHHHHHHHHHHHHhChh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC--ccHHHHHHHHHHHHHHHHHHHh
Confidence 8877777677788999999876 45566788877777777777766666665544 3467888788777777766677
Q ss_pred ccCCCCC
Q 012185 453 LPHLSSN 459 (469)
Q Consensus 453 vpet~g~ 459 (469)
+||++.+
T Consensus 188 ~~~~~~~ 194 (406)
T PRK15402 188 MPETAGR 194 (406)
T ss_pred CCCCCcc
Confidence 8988653
No 123
>TIGR00893 2A0114 d-galactonate transporter.
Probab=98.65 E-value=1.6e-07 Score=94.87 Aligned_cols=142 Identities=19% Similarity=0.076 Sum_probs=111.5
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
+...++.+...+.+.+.+++.||+|||+.+..+.++.+++....++.. +.+..++...+.
T Consensus 33 ~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~l~ 92 (399)
T TIGR00893 33 YVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAG--------------------AYVSLYILRVLL 92 (399)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHc--------------------CHHHHHHHHHHH
Confidence 455567788888999999999999999999999888877665555443 255566677788
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhc
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLK 452 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~ 452 (469)
|++.+.......++++|..|++ .+|..+|+.+....+.+++.+...+.+.+..| ....|.+.++..++.++..++.
T Consensus 93 g~~~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 168 (399)
T TIGR00893 93 GAAEAPFFPGIILIVASWFPAS--ERATAVSIFNSAQGLGGIIGGPLVGWILIHFS--WQWAFIIEGVLGIIWGVLWLKF 168 (399)
T ss_pred HHHHHhhhhHHHHHHHHhCCHH--HHHHHHHHHHHhchHHHHHHHHHHHHHHHhCC--chHHHHHHHHHHHHHHHHhhhe
Confidence 9888888888888999999875 67888999999999999998888887766555 3467888888777777766666
Q ss_pred ccCCCC
Q 012185 453 LPHLSS 458 (469)
Q Consensus 453 vpet~g 458 (469)
+||++.
T Consensus 169 ~~~~~~ 174 (399)
T TIGR00893 169 IPDPPQ 174 (399)
T ss_pred ecCCCC
Confidence 776543
No 124
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.64 E-value=2.1e-07 Score=94.82 Aligned_cols=281 Identities=14% Similarity=0.042 Sum_probs=171.8
Q ss_pred cccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHH
Q 012185 61 NTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLC 140 (469)
Q Consensus 61 n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~ 140 (469)
....+...++++...|||+||.|++++. +.++|..+.-+++-. +.. . .+ ...||....+-.+.+++.
T Consensus 119 GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~-----v~~----~-~g--~~~w~~~~~i~~~~l~v~ 185 (417)
T COG2223 119 GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPL-----VAV----A-FG--FLAWRNVAGIYVVALAIA 185 (417)
T ss_pred cceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHH-----HHH----H-Hh--hHHHHHHHHHHHHHHHHH
Confidence 3455667788999999999999999998 888888876654421 110 0 00 013666666666666666
Q ss_pred hhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCCCCC
Q 012185 141 ALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFND 220 (469)
Q Consensus 141 ~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (469)
.+...+..+|.|......++
T Consensus 186 ~v~~~~~~~d~p~~r~~~~~------------------------------------------------------------ 205 (417)
T COG2223 186 AVLAWLGMNDVPEHRASVKP------------------------------------------------------------ 205 (417)
T ss_pred HHHHHHHhCCChhhhccccc------------------------------------------------------------
Confidence 66666667776532111110
Q ss_pred Ccc-chHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHH
Q 012185 221 GPG-AVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNS 299 (469)
Q Consensus 221 ~~~-~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~ 299 (469)
+. ..++.+++ .+..|.+++..+..+=++..+..|.+.|..+ .|+-++. +.|.... .+.
T Consensus 206 -~~~~~~~~v~~-----~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~-~fg~~~~---------~Ag~~a~-----~f~ 264 (417)
T COG2223 206 -QLPAQLKAVFS-----NKDTWLLSLLYFATFGGFVGFSAYLPMYLVT-QFGLSPV---------TAGLIAF-----LFP 264 (417)
T ss_pred -cchhHHHHHhc-----CcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCChh---------hHHHHHH-----HHH
Confidence 00 12233332 2467888888888888899999999988765 5775542 2222222 233
Q ss_pred HHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhh
Q 012185 300 VVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAIT 379 (469)
Q Consensus 300 iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~ 379 (469)
....+.--+.++++||+|.+|+..+....+++++....+..... + .. ++........+.+....|++-+.+
T Consensus 265 ~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~--~----~~---~~~~~~~~~~l~l~~~~G~GnGsv 335 (417)
T COG2223 265 LIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGF--G----HG---GSFVVFVAVFLALFVFAGLGNGSV 335 (417)
T ss_pred HHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHcccccc--c----cC---cchHHHHHHHHHHHHHhccCcchh
Confidence 45556666788999999999988888888887765544432100 0 00 001112333455566677777765
Q ss_pred ccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhc
Q 012185 380 YSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLK 452 (469)
Q Consensus 380 ~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~ 452 (469)
|.++..+.|++ .|...|+....--+.-+..++..|...+..|. ....|++...+.+++.+..+..
T Consensus 336 ----fk~Ip~if~~~---~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~-~~~~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 336 ----FKMIPVIFPKE---TGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGS-YTGAFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred ----eeechHHHHhh---hhHHHHHHHHhccccccchhHHHHHHHHhccc-HHHHHHHHHHHHHHHHHHHHHH
Confidence 45888888864 56666666665555444445555555566663 3466888777777777755543
No 125
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=98.64 E-value=5.1e-07 Score=93.09 Aligned_cols=141 Identities=16% Similarity=0.035 Sum_probs=105.6
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
+....+.+...+...+.+++.||+|||+++..+.++.+++.+...+.. +.+..++...+.
T Consensus 54 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~l~ 113 (406)
T PRK11551 54 WAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAW--------------------DFPSLLVARLLT 113 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhc--------------------cHHHHHHHHHHH
Confidence 444556677788889999999999999999999888777655444432 244556667778
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhc
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLK 452 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~ 452 (469)
|++.+.......+++.|..|++ .+|+.+|+.+....+...+.+...+.+.+..+ ....|.+.+++.++..+...++
T Consensus 114 G~~~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 189 (406)
T PRK11551 114 GVGLGGALPNLIALTSEAVGPR--LRGTAVSLMYCGVPFGGALASVIGVLAAGDAA--WRHIFYVGGVGPLLLVPLLMRW 189 (406)
T ss_pred HhhHHHHHHHHHHHHHHHcCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHccccC--HHHHHHHHHHHHHHHHHHHHHh
Confidence 9888887777788999999875 67888999999999998888776655555443 3356777777777666656667
Q ss_pred ccCCC
Q 012185 453 LPHLS 457 (469)
Q Consensus 453 vpet~ 457 (469)
+||+.
T Consensus 190 l~~~~ 194 (406)
T PRK11551 190 LPESR 194 (406)
T ss_pred CCCCh
Confidence 78764
No 126
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=98.63 E-value=8.2e-07 Score=91.35 Aligned_cols=182 Identities=14% Similarity=0.119 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCc
Q 012185 239 AMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGS 318 (469)
Q Consensus 239 ~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~ 318 (469)
.+..+++..++..+++..+..+.+.+..| ++.++. +..+ .-.| +...++.+...+.+.+.+++.||+||
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~g~~~~------~~~~--~~~g-~~~~~~~~~~~~~~~~~g~l~dr~g~ 83 (408)
T PRK09874 15 NLTVAWLGCFLTGAAFSLVMPFLPLYVEQ--LGVTGH------SALN--MWSG-LVFSITFLFSAIASPFWGGLADRKGR 83 (408)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHHHH--hCCccc------hhHH--HHHH-HHHHHHHHHHHHHHHHHHHHhhhhCc
Confidence 45566778888888888788888887765 332210 0000 0112 44556677788888999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCCc
Q 012185 319 RLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQ 398 (469)
Q Consensus 319 r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~ 398 (469)
|+++..+.++.+++++...+.. +.+..++...+.|+..+ ....-.+++.+..|++ .+
T Consensus 84 r~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~--~~ 140 (408)
T PRK09874 84 KIMLLRSALGMGIVMVLMGLAQ--------------------NIWQFLILRALLGLLGG-FVPNANALIATQVPRN--KS 140 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh--------------------hHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHh--hh
Confidence 9999998888877665544332 13334444445565433 2233345677777765 56
Q ss_pred cchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccCC
Q 012185 399 GLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL 456 (469)
Q Consensus 399 G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpet 456 (469)
|..+|+.+....+.+++.+...+.+.+..| ....|.+.++..+++.+...+++||.
T Consensus 141 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 141 GWALGTLSTGGVSGALLGPLAGGLLADSYG--LRPVFFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 888999999999999888888887766554 34678888888887777677777765
No 127
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=98.63 E-value=7.7e-07 Score=94.57 Aligned_cols=177 Identities=12% Similarity=0.104 Sum_probs=118.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhh
Q 012185 236 LPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRW 315 (469)
Q Consensus 236 mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ 315 (469)
.|+.++.++.++++..++++.+..+.+.|+.+. ++-++ ++ .+ .....+.+...+..++.+++.||
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~-lgls~----------~~---a~-~i~~~~~~~~~l~~ligG~LaDR 71 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQ-LKYDD----------NH---AY-ELFSAYCSLVYVTPILGGFLADK 71 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCH----------HH---HH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 488899999999988889999998999888653 22211 11 11 33455667778888999999999
Q ss_pred c-CchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCC
Q 012185 316 I-GSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADS 394 (469)
Q Consensus 316 i-g~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~ 394 (469)
+ ||||...+|.++++++.+...+.. + .....++...+.+++.+.......++++|.+|++
T Consensus 72 ilGrrr~iliG~il~~lg~lll~~~~----~---------------~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~ 132 (493)
T PRK15462 72 VLGNRMAVMLGALLMAIGHVVLGASE----I---------------HPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPT 132 (493)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHHhh----c---------------chhHHHHHHHHHHHhcccccccHHHHHHHHCCCC
Confidence 9 999999999888877655333211 0 0011122222233334444444567999999876
Q ss_pred CCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHH
Q 012185 395 GGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVV 448 (469)
Q Consensus 395 ~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~ 448 (469)
++.++...++......+.-.+.+...|.+.+..| ....|.++++..+++.+.
T Consensus 133 ~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~G--w~~~F~iaaigm~l~li~ 184 (493)
T PRK15462 133 DPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYS--WAMGFGLAAVGMIAGLVI 184 (493)
T ss_pred CccccceehHHHHHHHHHHHHHHHHHHHHHhhhC--hHHHHHHHHHHHHHHHHH
Confidence 4345556888888888888888888888776655 335688777666655543
No 128
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=98.63 E-value=1.9e-07 Score=94.17 Aligned_cols=141 Identities=13% Similarity=0.092 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
+...++.+...+.+++.+++.||+|||+++.++.++.+++.+...+.. +.+..++...+.
T Consensus 34 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~ 93 (379)
T TIGR00881 34 LLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFST--------------------SLWVMAALWALN 93 (379)
T ss_pred HHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhh--------------------hHHHHHHHHHHH
Confidence 444566777888899999999999999999999988888776665553 245566667778
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHh-hccccceecccCccchHHHHHHHHHHHHHHHhhh
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVS-LGAGPWDALFGGGNIPAFVLASLSALAGGVVATL 451 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s-~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~ 451 (469)
|++.+.......++++|..|++ .+|..+|+.+....+.+++.+ ...+.+.+..+ ....|.+.+++.++.++++++
T Consensus 94 g~~~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 169 (379)
T TIGR00881 94 GIFQGMGWPPCGRTVTKWFSRS--ERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYS--WHWVFIVPGIIAIIVSLICFL 169 (379)
T ss_pred HhhccccCCchHHHHHHhcCHh--hheeeEeehhccchhHHHHHHHHHHHHHHhcCC--chhHHHHHHHHHHHHHHHHhe
Confidence 8888888888888999999876 567779999999999988887 34444433333 235677777777777776777
Q ss_pred cccCCC
Q 012185 452 KLPHLS 457 (469)
Q Consensus 452 ~vpet~ 457 (469)
.+||++
T Consensus 170 ~~~~~~ 175 (379)
T TIGR00881 170 LLRDSP 175 (379)
T ss_pred eeCCCc
Confidence 777653
No 129
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=98.61 E-value=6.4e-07 Score=89.08 Aligned_cols=168 Identities=16% Similarity=0.077 Sum_probs=124.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHH
Q 012185 242 VVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLV 321 (469)
Q Consensus 242 ~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l 321 (469)
.++...+...+++.....+.+.+..+ ++.++ . .. .+....+.+...+.+.+.+++.||+|||+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---------~----~~-~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~ 66 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAED--LGLSA---------S----QA-GLIVSAFSLGYALGSLLAGYLSDRFGRRRV 66 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHH--cCCCH---------H----HH-HHHHHHHHHHHHHHHHhHHHHHHHhCCchh
Confidence 35667777777777777777777655 23221 1 12 244556677888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCCccch
Q 012185 322 WAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLA 401 (469)
Q Consensus 322 ~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~ 401 (469)
+.++.++.+++.....+.. +.+..++...+.|++.+.....-.+++.|..|++ .+++.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~--~~~~~ 124 (352)
T cd06174 67 LLLGLLLFALGSLLLAFAS--------------------SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPK--ERGRA 124 (352)
T ss_pred hHHHHHHHHHHHHHHHHhc--------------------cHHHHHHHHHHHHcccccccHhHHHHHHHhCCcc--chhhh
Confidence 9999988888776555442 2455666777789988888888888999999975 67788
Q ss_pred hhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHh
Q 012185 402 IGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVA 449 (469)
Q Consensus 402 ~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~ 449 (469)
+|+.+....+.+.+.+...+.+.+..+ ....+.+.++..+++.+..
T Consensus 125 ~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 170 (352)
T cd06174 125 LGLFSAGFGLGALLGPLLGGLLAESLG--WRWLFLILAILGLLLALLL 170 (352)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988888776544 2356777777777766643
No 130
>PRK10489 enterobactin exporter EntS; Provisional
Probab=98.59 E-value=2.2e-07 Score=96.55 Aligned_cols=184 Identities=14% Similarity=0.065 Sum_probs=124.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC
Q 012185 238 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 317 (469)
Q Consensus 238 ~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig 317 (469)
+.++.+++.+++..++......+.+.+..+ +++++ . ..| +....+.+...+.+.+.+++.||+|
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~s~---------~----~~g-~~~~~~~l~~~~~~~~~G~l~dr~g 80 (417)
T PRK10489 17 PAFRAVFIARFISIFGLGLLGVAVPVQIQM--MTGST---------L----QVG-LSVTLTGGAMFIGLMVGGVLADRYD 80 (417)
T ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHH--HHCCH---------H----HHH-HHHHHHHHHHHHHHHhhHHHhhhcC
Confidence 456677888888888877777777776654 23221 1 123 4555667788888999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCC
Q 012185 318 SRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGG 397 (469)
Q Consensus 318 ~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~ 397 (469)
||++...+.++.+++.....+......+ +.+..++...+.|++.+.....-.+++.|..|++ .
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~ 143 (417)
T PRK10489 81 RKKLILLARGTCGLGFIGLALNAFLPEP---------------SLLAIYLLGLWDGFFGSLGVTALLAATPALVGRE--N 143 (417)
T ss_pred CceEEEehHHHHHHHHHHHHHHHHcCCC---------------cHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHH--H
Confidence 9999988888777766544432211001 1333444555566666654444456788888875 5
Q ss_pred ccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccCCC
Q 012185 398 QGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLS 457 (469)
Q Consensus 398 ~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpet~ 457 (469)
+++..|+.+....+.+.+.+.+.+.+.+..|. .+.|.+.++..+++.+ ..+.+|+++
T Consensus 144 ~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~--~~~~~~~~~~~~~~~~-~~~~l~~~~ 200 (417)
T PRK10489 144 LMQAGAITMLTVRLGSVISPALGGLLIAAGGV--AWNYGLAAAGTFITLL-PLLRLPALP 200 (417)
T ss_pred HHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHH-HHHhCCCCC
Confidence 67889999999999999888888877765542 3667777777776665 556677654
No 131
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.59 E-value=6.7e-07 Score=99.44 Aligned_cols=141 Identities=14% Similarity=0.057 Sum_probs=103.6
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
+...++.+..++.+++.+++.||+|||++++++.++++++.+.+++.. +....++.-.+.
T Consensus 206 ~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~--------------------s~~~llv~R~l~ 265 (742)
T TIGR01299 206 MLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQ--------------------GYGFFLFCRLLS 265 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHh--------------------hHHHHHHHHHHH
Confidence 334455677788899999999999999999999888877666655543 244555667778
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceeccc-----------CccchHHHHHHHH
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFG-----------GGNIPAFVLASLS 441 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g-----------~~~~~~f~~~~v~ 441 (469)
|++.+....+.+++++|..|.+ .+|..+++++.+..+..++.+.+...++...| ....+.+.+.++.
T Consensus 266 G~g~g~~~p~~~~~isE~~p~~--~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp 343 (742)
T TIGR01299 266 GFGIGGAIPIVFSYFAEFLAQE--KRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFP 343 (742)
T ss_pred HHHHHHHHHHHHHHHHHHCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHH
Confidence 9999988899999999999976 67888999999988888887765443332211 0123556666666
Q ss_pred HHHHHHHhhhcccCC
Q 012185 442 ALAGGVVATLKLPHL 456 (469)
Q Consensus 442 ~liaai~~~~~vpet 456 (469)
++++.+ ..+++||+
T Consensus 344 ~ll~ll-~~~~lPES 357 (742)
T TIGR01299 344 CVFAIG-ALTFMPES 357 (742)
T ss_pred HHHHHH-HHHHcCCC
Confidence 665544 66788998
No 132
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=98.58 E-value=8.6e-07 Score=94.58 Aligned_cols=145 Identities=12% Similarity=0.043 Sum_probs=111.4
Q ss_pred HHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHH
Q 012185 292 AFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTL 371 (469)
Q Consensus 292 ~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (469)
.|....|.+...+...+.+++.||+|||+++.++.++++++.+..++.. +.+..++.-.+
T Consensus 44 ~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~--------------------~~~~li~~r~l 103 (495)
T PRK14995 44 LWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSP--------------------TASWLIATRAL 103 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcC--------------------CHHHHHHHHHH
Confidence 3666778888888888999999999999999999999988776655543 24455566667
Q ss_pred hccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhh
Q 012185 372 LGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATL 451 (469)
Q Consensus 372 ~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~ 451 (469)
.|++.+.....-.+++.+.++++ +.+|+.+|+......+.+.+.+...+.+.+..| ..+.|++...+.++..++..+
T Consensus 104 ~G~g~~~~~~~~~~~l~~~~~~~-~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~g--wr~~f~i~~~~~~~~~~l~~~ 180 (495)
T PRK14995 104 LAIGAAMIVPATLAGIRATFTEE-KQRNMALGVWAAVGSGGAAFGPLVGGILLEHFY--WGSVFLINVPIVLVVMGLTAR 180 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC--hHHHHHHHHHHHHHHHHHHHH
Confidence 88888876665566676665432 367888999999999999999998888887665 457888888778877777777
Q ss_pred cccCCCCC
Q 012185 452 KLPHLSSN 459 (469)
Q Consensus 452 ~vpet~g~ 459 (469)
.+|+.+++
T Consensus 181 ~l~~~~~~ 188 (495)
T PRK14995 181 YVPRQAGR 188 (495)
T ss_pred hCCCCCCC
Confidence 78876543
No 133
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=98.57 E-value=1.4e-06 Score=89.60 Aligned_cols=179 Identities=11% Similarity=-0.051 Sum_probs=121.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC
Q 012185 238 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 317 (469)
Q Consensus 238 ~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig 317 (469)
+.+..+++..++..++......+.+.++.++ ++.++ . ..| +...++.+...+.+.+.+++.||+|
T Consensus 15 ~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~-~g~s~---------~----~~g-~~~~~~~~~~~i~~~~~G~l~Dr~g 79 (399)
T PRK05122 15 LRIVSIVMFTFISYLTIGLPLAVLPGYVHDQ-LGFSA---------F----LAG-LVISLQYLATLLSRPHAGRYADTLG 79 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCccH---------H----HHH-HHHHHHHHHHHHhchhhHhHHhccC
Confidence 3566678888888888777777777776552 33221 1 123 5556677888899999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCC
Q 012185 318 SRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGG 397 (469)
Q Consensus 318 ~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~ 397 (469)
||+++..+.++.+++.....+.... ++ . +..+.+..++.-.+.|++.+.......+++.|..|++ +
T Consensus 80 ~r~~l~~~~~~~~~~~~~~~~~~~~--~~----~------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~--~ 145 (399)
T PRK05122 80 PKKAVVFGLCGCALSGLLYLLAGLL--AA----W------PVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGAL--H 145 (399)
T ss_pred CcchHHHHHHHHHHHHHHHHHhhhh--hc----c------chhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChh--h
Confidence 9999999988877654444333211 00 0 0112444566667889988887777677788888876 5
Q ss_pred ccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHH
Q 012185 398 QGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGV 447 (469)
Q Consensus 398 ~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai 447 (469)
+|+.+|+.+....+..++.+...+.+.+..| ....+.+.++.++++.+
T Consensus 146 r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g--~~~~~~~~~~~~~~~~~ 193 (399)
T PRK05122 146 TGRVISWNGIATYGALAIGAPLGVLLYHWGG--LAGLGLLIMLLALLGLL 193 (399)
T ss_pred hccchhhhhhhhhHHHHHHHHHHHHHHHccc--HHHHHHHHHHHHHHHHH
Confidence 6778999888888888887777777766555 23455555555554444
No 134
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=98.57 E-value=5.7e-06 Score=88.31 Aligned_cols=113 Identities=16% Similarity=0.158 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHhHHHhhhhcCchHH-------HHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHH
Q 012185 297 LNSVVLGVSSFLIEPMCRWIGSRLV-------WAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVF 369 (469)
Q Consensus 297 i~~iv~~i~s~i~~~l~~~ig~r~l-------~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (469)
++.+...+.+-+.+++.||+++|+. ..+|.++.+++++.++.......+ .+... ..+..+...
T Consensus 317 ~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~-~~~~~---------s~~~~i~~~ 386 (489)
T PRK10207 317 LNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFAD-AQGLT---------SPWFIVLVY 386 (489)
T ss_pred HhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcC-CCCcc---------CHHHHHHHH
Confidence 4555566677778899999998863 667888877776554332211000 00000 133344566
Q ss_pred HHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccc
Q 012185 370 TLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAG 421 (469)
Q Consensus 370 ~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g 421 (469)
.+.|++......+-.+++.+..|++ .+|..+|+.+++..+++.+...+..
T Consensus 387 ~l~g~Ge~~~~~~g~~~~~~~aP~~--~~g~~~g~~~l~~~ig~~lg~~l~~ 436 (489)
T PRK10207 387 LFQSLGELFISALGLAMIAALVPQH--LMGFILGMWFLTQAAAFLLGGYVAT 436 (489)
T ss_pred HHHHHHHHHHhHHHHHHHHHhChHH--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6788888888777788999999976 7899999999999999988776553
No 135
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=98.56 E-value=6.3e-07 Score=92.06 Aligned_cols=167 Identities=13% Similarity=0.001 Sum_probs=114.2
Q ss_pred HHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHH
Q 012185 250 TWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIV 329 (469)
Q Consensus 250 ~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ 329 (469)
+.++|..+....+....| |+-++ . ..| +....+.+...+..++.+++.||+|||++...+.+.+
T Consensus 3 ~~~~~~~~~~~lp~i~~~--~~~s~----------~---~~g-~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~ 66 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAED--IDVSK----------E---ELG-LLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATF 66 (368)
T ss_pred hhHHHHHHHhhHHHHHHH--hCcCH----------H---HHH-HHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHH
Confidence 456777777777766554 44321 1 123 3334456677788889999999999998766554443
Q ss_pred HHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHH
Q 012185 330 FACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAI 409 (469)
Q Consensus 330 ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i 409 (469)
..+.. ..... + +....++.-.+.|++.+. ....++.++|+.|++ ++|+.+|+.+...
T Consensus 67 ~~~~~-~~~~~----~---------------~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~--~r~~a~~~~~~~~ 123 (368)
T TIGR00903 67 AAAAG-RLLDP----F---------------NYEWLLACQLLAALGQPF-LLNAFAPAASQIREE--RRDLVISLLSFAM 123 (368)
T ss_pred HHHHH-HHHHh----c---------------cHHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHH--HHHHHHHHHHHHH
Confidence 33221 11110 0 244566666667888774 456667789999975 7899999999999
Q ss_pred HHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccCCC
Q 012185 410 VIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLS 457 (469)
Q Consensus 410 ~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpet~ 457 (469)
.+...+.+...+.+.+..| .+..|.+.++.+++.+++.++++||.+
T Consensus 124 ~lG~~l~~~~~~~l~~~~g--Wr~~f~~~~~l~~~~~~~~~~~lp~~p 169 (368)
T TIGR00903 124 YLGIIFALAAGLKIYTAGG--LQLLIIPIAAVAAAGIILVLAALPALP 169 (368)
T ss_pred HHHHHHHHHHHHHHHHccc--hHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 9999999888877766554 456788877777777777788899864
No 136
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=98.56 E-value=1.8e-06 Score=89.39 Aligned_cols=160 Identities=11% Similarity=0.010 Sum_probs=106.3
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhh
Q 012185 235 HLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCR 314 (469)
Q Consensus 235 ~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~ 314 (469)
..|+.+....+..++.-++......|.+.+..+ ++.++ . ..| +.+..+.+...+.+.+.+++.|
T Consensus 10 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~--~g~s~----------~---~~g-~~~~~~~~~~~i~~~~~g~l~d 73 (402)
T TIGR00897 10 GIPLNLLWGYIGVVVFMTGDGLEQGWLSPFLKA--LGLSP----------Q---QSA-SAFTLYGIAAAISAWISGVVAE 73 (402)
T ss_pred CCCchhhHHHHHHHHHHHhhhhHHHhHHHHHHH--hCCCH----------H---HhH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 356777877888777766655555566666644 33321 1 123 4556778888999999999999
Q ss_pred hcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCC
Q 012185 315 WIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADS 394 (469)
Q Consensus 315 ~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~ 394 (469)
|+|||+++..+.++++++++......... + +.+..++...+.|++.+.......+.+.+..|++
T Consensus 74 r~g~k~~l~~~~~~~~~~~~~~~~~~~~~-~---------------~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~ 137 (402)
T TIGR00897 74 IIGPLKTMMIGLLLWCVGHAAFIVFGLGH-A---------------NYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQD 137 (402)
T ss_pred HcCcHHHHHHHHHHHHHHHHHHHHHhccC-c---------------cHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHH
Confidence 99999999999988887765432221100 0 2344445555678877755444445566777765
Q ss_pred CCCccchhhHHHHHHHHHHH-HHhhccccceeccc
Q 012185 395 GGGQGLAIGVLNLAIVIPQM-IVSLGAGPWDALFG 428 (469)
Q Consensus 395 ~~~~G~~~gi~n~~i~l~Qi-l~s~~~g~l~~~~g 428 (469)
++|+.+|+.+....+++. +.+...+.+.+..|
T Consensus 138 --~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g 170 (402)
T TIGR00897 138 --NLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFG 170 (402)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 678889999999988874 55565666666555
No 137
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=98.55 E-value=1.3e-06 Score=89.89 Aligned_cols=142 Identities=14% Similarity=0.184 Sum_probs=102.9
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
+.+.++.+...+.+.+.+++.||+|||+.+.++.++.+++.+...+.. +....++...+.
T Consensus 47 ~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~--------------------~~~~l~~~~~~~ 106 (394)
T PRK11652 47 AVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAH--------------------SLTVLIAASAIQ 106 (394)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHc--------------------cHHHHHHHHHHH
Confidence 445566777888889999999999999999998888777665444332 244455566677
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhc
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLK 452 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~ 452 (469)
|++.+.......+++.|..+.+ +++..++..+....+.+.+.+.+.+.+.+..| ....|.+.++..++.++...++
T Consensus 107 g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g--~~~~f~~~~~~~~~~~~~~~~~ 182 (394)
T PRK11652 107 GLGTGVGGVMARTLPRDLYEGT--QLRHANSLLNMGILVSPLLAPLIGGLLTTLFG--WRACYLFLLLLGAGVTFSMARW 182 (394)
T ss_pred HhhhhHHHHHHHHHHHHhcCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC--hHHHHHHHHHHHHHHHHHHHHh
Confidence 8877766666667778877754 57778899999999888888877777665444 3466777777666666656677
Q ss_pred ccCCCC
Q 012185 453 LPHLSS 458 (469)
Q Consensus 453 vpet~g 458 (469)
+||++.
T Consensus 183 ~~~~~~ 188 (394)
T PRK11652 183 MPETRP 188 (394)
T ss_pred CCccCc
Confidence 888654
No 138
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=98.55 E-value=1.4e-06 Score=88.24 Aligned_cols=148 Identities=10% Similarity=0.054 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCch
Q 012185 240 MHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSR 319 (469)
Q Consensus 240 l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r 319 (469)
++..|+..+.....|+.+..+.++++.+ .++-++ . .. .+...++.+...+.+.+.+++.||+|||
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~----------~---~~-~~~~~~~~~~~~~~~~~~g~l~dr~g~r 67 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKD-DLGLST----------A---QL-GNLVAVPVLAGAVLRIILGFLVDKFGPR 67 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHH-HhCCCH----------H---Hh-hHhhHHHHHHHHHHHHHHHHHHHHhCch
Confidence 3456666666666777777777765554 244331 1 12 2455567778889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCCcc
Q 012185 320 LVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQG 399 (469)
Q Consensus 320 ~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G 399 (469)
+.+.++.++.+++.+...+... +....++...+.|++.+. ...-.+++++..|++ .+|
T Consensus 68 ~~~~~~~~~~~i~~~~~~~~~~-------------------~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~--~r~ 125 (366)
T TIGR00886 68 YTTTLSLLLLAIPCLWAGLAVQ-------------------SYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKK--IQG 125 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh-------------------hHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHh--hhh
Confidence 9999999988887766555430 123334444556666443 334467889999875 567
Q ss_pred chhhHHHHHHHHHHHHHhhccccce
Q 012185 400 LAIGVLNLAIVIPQMIVSLGAGPWD 424 (469)
Q Consensus 400 ~~~gi~n~~i~l~Qil~s~~~g~l~ 424 (469)
..+++.+....+...+.+.+.+.+.
T Consensus 126 ~~~~~~~~~~~~g~~~~~~i~~~l~ 150 (366)
T TIGR00886 126 TALGLAAGWGNMGGGVAQFVMPPII 150 (366)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 7788888666666666555555443
No 139
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=98.54 E-value=1.4e-06 Score=88.36 Aligned_cols=176 Identities=20% Similarity=0.094 Sum_probs=108.1
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHH
Q 012185 245 IVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAI 324 (469)
Q Consensus 245 ~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~ 324 (469)
+..|+..++.-.+.-+.+.|+.++ ++.++ . ..| +....+.+...+.+.+.+++.||+||||.++.
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~-~g~s~---------~----~~g-~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~ 68 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEE-VRARP---------A----MIG-LFYTGSAIVGIAVSQLLATRSDYQGDRKGLIL 68 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcc-cCCCH---------H----HHH-HHHHHHHHHHHHHHHHHHHHHhccCCchHHHH
Confidence 446666777666677777666542 33321 1 123 34445667778888889999999999987765
Q ss_pred -HHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCCccchhh
Q 012185 325 -SNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIG 403 (469)
Q Consensus 325 -s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~g 403 (469)
+.+..+++....++.. +.+..++.-.+.|...+.....-.+++.|..|+++|.++...|
T Consensus 69 ~~~~~~~~~~~~~~~~~--------------------~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 128 (375)
T TIGR00899 69 FCCLLAALACLLFAWNR--------------------NYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSS 128 (375)
T ss_pred HHHHHHHHHHHHHHhcc--------------------hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHH
Confidence 4444333333333222 1222333333344444444433445677777765444444467
Q ss_pred HHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccCCC
Q 012185 404 VLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLS 457 (469)
Q Consensus 404 i~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpet~ 457 (469)
+.+....+.+.+.+...+.+.+..| ..+.|.+.+++.++.+++.++++||.+
T Consensus 129 ~~~~~~~~g~~ig~~~~~~l~~~~~--~~~~f~~~~~~~~~~~~~~~~~~~~~~ 180 (375)
T TIGR00899 129 VMRAQISLAWVIGPPLAFWLALGFG--FTVMFLTAALAFVLCGVLVWLFLPSYP 180 (375)
T ss_pred HHHHHHhHHHHHhhhHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 8777778888887777777665554 346788888888888877777788754
No 140
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.54 E-value=1.1e-05 Score=83.92 Aligned_cols=187 Identities=17% Similarity=0.112 Sum_probs=121.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC
Q 012185 238 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 317 (469)
Q Consensus 238 ~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig 317 (469)
|++..+.+..++...+.-.+..|.+.|+.|.. |. ... ..| ....+..+.-+..=+..+++.+|+|
T Consensus 207 ~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~g--g~-----------~~~-~~g-~~~~l~~~aEi~~f~~~~~~~~r~g 271 (400)
T PF03825_consen 207 PRFLVFLLAAFLIGISHAAYYTFFSIYLQELG--GY-----------SGS-TIG-ILWALGVVAEIPFFFFSGRFLKRFG 271 (400)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc--cc-----------hhh-HHH-HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34555666777778888888888888887622 11 111 112 1112223334445567899999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHH-HHHHHHhccchhhhccccchhhhccccCCCC
Q 012185 318 SRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVAS-LVVFTLLGFPLAITYSVPFAITAELTADSGG 396 (469)
Q Consensus 318 ~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~ 396 (469)
.|++..++.+..++=...++... + |++..+.. ++-..+.|++++.+.......+.+..|++
T Consensus 272 ~~~ll~~a~~~~~vR~~l~a~~~----~------------~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~-- 333 (400)
T PF03825_consen 272 IKWLLLLALVAYAVRWLLYAYFS----D------------PWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPE-- 333 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc----C------------CcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcc--
Confidence 99999998877765444444332 1 11111211 22245689999988888888899999986
Q ss_pred CccchhhHHHHH-HHHHHHHHhhccccceecccCcc----chHHHHHHHHHHHHHHHhhhcccCCC
Q 012185 397 GQGLAIGVLNLA-IVIPQMIVSLGAGPWDALFGGGN----IPAFVLASLSALAGGVVATLKLPHLS 457 (469)
Q Consensus 397 ~~G~~~gi~n~~-i~l~Qil~s~~~g~l~~~~g~~~----~~~f~~~~v~~liaai~~~~~vpet~ 457 (469)
.+++..|+++.. .-+...+.++++|.+.+..|.+. ...+.+.+++.++..+..+.+.+|++
T Consensus 334 ~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~~~ 399 (400)
T PF03825_consen 334 LRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFKPKH 399 (400)
T ss_pred chHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhccCCC
Confidence 567779998875 46888999999999998877442 13355666666666665566666654
No 141
>PRK12307 putative sialic acid transporter; Provisional
Probab=98.53 E-value=2e-06 Score=89.30 Aligned_cols=140 Identities=14% Similarity=0.070 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
+...++.+...+.+.+.+++.||+|||+++..+.++.+++.+..++.. +.+..++.-.+.
T Consensus 57 ~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~--------------------~~~~l~~~r~l~ 116 (426)
T PRK12307 57 FLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLAS--------------------GVIMLTLSRFIV 116 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHh--------------------HHHHHHHHHHHH
Confidence 334456677788889999999999999999999999988877666554 244556666778
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhc
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLK 452 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~ 452 (469)
|++.+.......+++.|..|++ .+|+.+|+.+....+..++.+...+.+.+..| ..+.|.++.+..++ .++....
T Consensus 117 G~g~g~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~--w~~~f~i~~~~~~~-~~~~~~~ 191 (426)
T PRK12307 117 GMGMAGEYACASTYAVESWPKH--LKSKASAFLVSGFGIGNIIAAYFMPSFAEAYG--WRAAFFVGLLPVLL-VIYIRAR 191 (426)
T ss_pred HHHHhhHHHHHHHHHHHhCCHh--HhhHhhhHHHHHHhHHHHHHHHHHHHHcccCC--HHHHHHHHHHHHHH-HHHHHHH
Confidence 8888888888888999999976 57888999999999998888877776665554 33566665444333 3323344
Q ss_pred ccCCC
Q 012185 453 LPHLS 457 (469)
Q Consensus 453 vpet~ 457 (469)
.||++
T Consensus 192 ~p~~~ 196 (426)
T PRK12307 192 APESK 196 (426)
T ss_pred CCCCh
Confidence 66654
No 142
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.49 E-value=7e-06 Score=90.34 Aligned_cols=231 Identities=9% Similarity=0.078 Sum_probs=128.5
Q ss_pred hhHHHHHHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhcccccc-----chhhhhh--cccchh
Q 012185 46 AFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASG-----SWHRWFP--FLTSRA 118 (469)
Q Consensus 46 i~~~v~g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~-----~w~~~~~--~~~~~~ 118 (469)
..+.+++-.+.-++.........+|+.|..|+++|++..++......+|..+|+++|+.. ||+...+ ...+..
T Consensus 172 ~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~ 251 (633)
T TIGR00805 172 WLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPT 251 (633)
T ss_pred ehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCC
Confidence 345667888999999999999999999999999999999999999999999999998752 3321100 000000
Q ss_pred -hhcccchhHHHHHHHHHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCC
Q 012185 119 -CCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESG 197 (469)
Q Consensus 119 -~~~~~~~~~~~f~i~~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (469)
.+. -+.|+..|++.+++.++..++ ++..||+......+.+.++.+ ..+. + .
T Consensus 252 dprW-iGaWwl~Fli~g~l~~l~~v~-l~~~p~~lp~~~~~~~~~~~~----~~~~------~----------------~ 303 (633)
T TIGR00805 252 DPRW-IGAWWIGFLICGGVALLTSIP-FFFFPKALPKEGKRVNVDVHE----TEKL------E----------------K 303 (633)
T ss_pred CccH-HHHHHHHHHHHHHHHHHHHHH-HHhCccccCCcccccchhhhh----hhcc------c----------------c
Confidence 000 124677788877766555443 445565432111100100000 0000 0 0
Q ss_pred cccchhhhhhhccccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCC
Q 012185 198 HESDANLKHISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGN 277 (469)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~ 277 (469)
.+ .+++.+ . ......+...++.+.+- +.++...+..++...+++.+..|.+.|+.+ .|+-++
T Consensus 304 ~~-----------~~~~~~-~-~~~~~~~~~~~~~Ll~n-~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~-~~g~s~--- 365 (633)
T TIGR00805 304 SE-----------DKSRKK-N-SDITKDFPKIIKRLLCN-PIYMLVILAQVIDSLAFNGYITFLPKYLEN-QYGISS--- 365 (633)
T ss_pred cc-----------cccchh-h-hhhHHHHHHHHHHHHcC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCcH---
Confidence 00 000000 0 00001111222222222 356667888888899999999999999865 455432
Q ss_pred ChhhhhHHHHhHHHHHHHHHHHH-HHHHHHHhHHHhhhhcCc--hHHHHHHHHHHHHHH
Q 012185 278 DHEVKFYDQGVREGAFGLLLNSV-VLGVSSFLIEPMCRWIGS--RLVWAISNFIVFACM 333 (469)
Q Consensus 278 ~~~~~~y~~gv~~G~~~l~i~~i-v~~i~s~i~~~l~~~ig~--r~l~~~s~~~~ai~~ 333 (469)
.+.+.-. .+..+ ..++.+++.++++||+++ |++..++.++..+++
T Consensus 366 ------~~ag~l~-----~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~ 413 (633)
T TIGR00805 366 ------AEANFLI-----GVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSY 413 (633)
T ss_pred ------HHHHHHh-----hhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHH
Confidence 1122111 12222 345667788899999874 455555555444443
No 143
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=98.48 E-value=1.3e-06 Score=92.25 Aligned_cols=154 Identities=14% Similarity=0.054 Sum_probs=109.0
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
+...++.+...+.+++.+++.||+|||+++.++.++++++.+..++....... . .+++.......++.=.+.
T Consensus 59 ~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~-----~---~~~~~~~~~~l~~~R~l~ 130 (479)
T PRK10077 59 FCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTS-----I---GPDNTGYVPEFVIYRIIG 130 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhcccccc-----c---cccchhHHHHHHHHHHHH
Confidence 55566778888999999999999999999999999988877665543211000 0 000111234445566778
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceec-----cc-CccchHHHHHHHHHHHHH
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDAL-----FG-GGNIPAFVLASLSALAGG 446 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~-----~g-~~~~~~f~~~~v~~liaa 446 (469)
|++.+....+..++++|+.|++ .+|+.+|+.+....+.+++.....+.+... .+ .+..+.|.+.++.+++..
T Consensus 131 G~~~g~~~~~~~~~i~e~~~~~--~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~ 208 (479)
T PRK10077 131 GIGVGLASMLSPMYIAEIAPAH--IRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFL 208 (479)
T ss_pred hhhHhHHhhHHHHHHHhhCChh--hhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHH
Confidence 9999999999999999999986 578889999999999998876554333211 01 123467888888887766
Q ss_pred HHhhhcccCCC
Q 012185 447 VVATLKLPHLS 457 (469)
Q Consensus 447 i~~~~~vpet~ 457 (469)
+ ..+++||+.
T Consensus 209 ~-~~~~l~~s~ 218 (479)
T PRK10077 209 M-LLYFVPETP 218 (479)
T ss_pred H-HHHcCCCCc
Confidence 5 567789874
No 144
>PRK03893 putative sialic acid transporter; Provisional
Probab=98.47 E-value=2.6e-06 Score=90.37 Aligned_cols=176 Identities=14% Similarity=0.087 Sum_probs=117.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchH
Q 012185 241 HVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRL 320 (469)
Q Consensus 241 ~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~ 320 (469)
..+++..++..+.........+....+ |+-++ .+ .+ +....+.+...+..++.+++.||+|||+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~~s~----------~~---~~-~~~~~~~~~~~~~~~~~g~l~dr~g~r~ 86 (496)
T PRK03893 23 SAAWLGYLLDGFDFVLITLVLTEVQGE--FGLTT----------VQ---AA-SLISAAFISRWFGGLLLGAMGDRYGRRL 86 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCCH----------HH---HH-HHHHHHHHHHHHHHHHHHHHHHHhCcHH
Confidence 345556666555554444444444332 33321 11 12 3444566677888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCCccc
Q 012185 321 VWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGL 400 (469)
Q Consensus 321 l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~ 400 (469)
++.++.++.+++.+...+.. +....++...+.|++.+.......+++.|..|++ .+|.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~--------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~--~r~~ 144 (496)
T PRK03893 87 AMVISIVLFSVGTLACGFAP--------------------GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKH--LRNK 144 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHh--------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH--HHHH
Confidence 99999888887766555443 2444566667788888877777778999999876 5688
Q ss_pred hhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccCCC
Q 012185 401 AIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLS 457 (469)
Q Consensus 401 ~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpet~ 457 (469)
.+|+.+....+.+++.+...+.+.+..| ..+.|.++.+..++ +++.....||++
T Consensus 145 ~~~~~~~~~~~g~~~~~~~~~~l~~~~~--w~~~f~~~~~~~~~-~~~~~~~~p~~~ 198 (496)
T PRK03893 145 ASGFLISGFSIGAVVAAQVYSLVVPVWG--WRALFFIGILPIIF-ALWLRKNLPEAE 198 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCC--HHHHHHHHHHHHHH-HHHHHHhCCCch
Confidence 8999999999999998888887766554 33566665544443 333445567653
No 145
>PRK11043 putative transporter; Provisional
Probab=98.46 E-value=2.9e-06 Score=87.48 Aligned_cols=139 Identities=11% Similarity=-0.005 Sum_probs=96.4
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
+...++.+...+.+.+.+++.||+|||+++..+.++.+++.+...+.. +.+..++...+.
T Consensus 45 ~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--------------------~~~~l~~~~~l~ 104 (401)
T PRK11043 45 ASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVE--------------------SAAQLLVLRFVQ 104 (401)
T ss_pred HHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhc--------------------CHHHHHHHHHHH
Confidence 445556677788899999999999999999998888877665554432 133444455566
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhc
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLK 452 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~ 452 (469)
|++.+.......+++.|..|++ ..+...+..+....+...+.+...+.+.+..| ....|.+.+++.++..+..++.
T Consensus 105 G~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~ 180 (401)
T PRK11043 105 AVGVCSAAVIWQALVIDRYPAQ--KANRVFATIMPLVALSPALAPLLGAWLLNHFG--WQAIFATLFAITLLLILPTLRL 180 (401)
T ss_pred HhhhHHHHHHHHHHHHHhcCcH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--hHHHHHHHHHHHHHHHHHHHHc
Confidence 7766655544557888988865 45667788887777888787777777766555 3356777777777776644443
Q ss_pred ccC
Q 012185 453 LPH 455 (469)
Q Consensus 453 vpe 455 (469)
.|+
T Consensus 181 ~~~ 183 (401)
T PRK11043 181 KPS 183 (401)
T ss_pred CCC
Confidence 333
No 146
>PRK03633 putative MFS family transporter protein; Provisional
Probab=98.46 E-value=3.4e-06 Score=86.51 Aligned_cols=152 Identities=13% Similarity=0.022 Sum_probs=111.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhc
Q 012185 237 PPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWI 316 (469)
Q Consensus 237 P~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~i 316 (469)
+|+++.++..+++.+++......+.+.+..| ++.++ . ..| +.+..+.+...+...+.+++.||+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~--~~~s~----------~---~~G-~~~s~~~l~~~~~~~~~g~l~dr~ 68 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQ--EHLPT----------W---QVG-VVSSSYFTGNLVGTLLAGYVIKRI 68 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH--cCCCH----------H---HHH-HHHHHHHHHHHHHHHhHHHHHHHH
Confidence 4578888899999999988888888888765 34321 1 123 555567778888899999999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCC
Q 012185 317 GSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGG 396 (469)
Q Consensus 317 g~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~ 396 (469)
|||+.+..+.++.+++....++.. +.+..++...+.|++.+....+-.+.+.+..+++
T Consensus 69 g~k~~~~~~~~~~~~~~~~~~~~~--------------------~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~-- 126 (381)
T PRK03633 69 GFNRSYYLASLIFAAGCAGLGLMV--------------------GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSR-- 126 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc--------------------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH--
Confidence 999999999988887766555443 2445556667788887765443334556666654
Q ss_pred CccchhhHHHHHHHHHHHHHhhccccceec
Q 012185 397 GQGLAIGVLNLAIVIPQMIVSLGAGPWDAL 426 (469)
Q Consensus 397 ~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~ 426 (469)
.+|..+|+.+....+.+.+.+...+.+.+.
T Consensus 127 ~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 156 (381)
T PRK03633 127 NRGRLLAAYMMVYYLGTVLGQLLVSKVSTE 156 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 578889999999999999888888776554
No 147
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=98.45 E-value=5.1e-06 Score=88.51 Aligned_cols=144 Identities=14% Similarity=0.098 Sum_probs=97.3
Q ss_pred HHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchh
Q 012185 298 NSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLA 377 (469)
Q Consensus 298 ~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a 377 (469)
..+...+.+++.+++.||+|||+++.++.++++++.+.+++...... . +.+.....++.=.+.|++.+
T Consensus 66 ~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~------~------g~~a~~~l~~~R~l~G~g~g 133 (490)
T PRK10642 66 PFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYAT------I------GIWAPILLLLCKMAQGFSVG 133 (490)
T ss_pred HHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHH------H------HHHHHHHHHHHHHHHHhHhH
Confidence 33556777889999999999999999999999998877776642100 0 00011234555567899999
Q ss_pred hhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecc------cCccchHHHHHHHHHHHHHHHhhh
Q 012185 378 ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALF------GGGNIPAFVLASLSALAGGVVATL 451 (469)
Q Consensus 378 ~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~------g~~~~~~f~~~~v~~liaai~~~~ 451 (469)
.....-.++++|..|++ .+|...++.+....+..++.+.....+.... ..+....|+++++..+++.+ ...
T Consensus 134 ~~~~~~~~~~~e~~p~~--~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~-~~~ 210 (490)
T PRK10642 134 GEYTGASIFVAEYSPDR--KRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLY-LRH 210 (490)
T ss_pred hhHHHHHHHHHHhCCCC--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHH-HHH
Confidence 88888889999999986 5678888888776666655543332221111 11245678887776665444 566
Q ss_pred cccCC
Q 012185 452 KLPHL 456 (469)
Q Consensus 452 ~vpet 456 (469)
.+||+
T Consensus 211 ~~~es 215 (490)
T PRK10642 211 ALEET 215 (490)
T ss_pred cCCCC
Confidence 78886
No 148
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=98.45 E-value=1.2e-06 Score=89.18 Aligned_cols=142 Identities=13% Similarity=0.154 Sum_probs=107.5
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
+...++.+...+...+.+++.||+|||+++..+.++.+++.....+.. +....++...+.
T Consensus 30 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~--------------------~~~~~~~~~~l~ 89 (377)
T PRK11102 30 MTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQ--------------------TIDQLIYMRFLH 89 (377)
T ss_pred HHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHc--------------------cHHHHHHHHHHH
Confidence 344456677788889999999999999999999988887766555432 234455566677
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhc
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLK 452 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~ 452 (469)
|++.+.......+++.|..|++ .+|+.+|+.+....+..++.+...+.+.+..| ....|.+.++..++..+...+.
T Consensus 90 g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 165 (377)
T PRK11102 90 GLAAAAASVVINALMRDMFPKE--EFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFS--WHAIFWVLALAAILAAALVFFF 165 (377)
T ss_pred HHHHHHHHHHHHHHHHHhcCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHHh
Confidence 8888877666778999998865 67888999999999999888887777766554 3367777778777777767777
Q ss_pred ccCCCC
Q 012185 453 LPHLSS 458 (469)
Q Consensus 453 vpet~g 458 (469)
+||++.
T Consensus 166 ~~~~~~ 171 (377)
T PRK11102 166 IPETLP 171 (377)
T ss_pred CCccCc
Confidence 887643
No 149
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=98.44 E-value=4.5e-06 Score=86.05 Aligned_cols=185 Identities=14% Similarity=0.055 Sum_probs=114.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC
Q 012185 238 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 317 (469)
Q Consensus 238 ~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig 317 (469)
|.++.+....++.+.+|..+.-+.+.|+.+ .++.++ - ..| +...++.+...+.+.+.+++.||+|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~s~---------~----~~g-~~~~~~~l~~~i~~~~~G~l~Dr~g 66 (396)
T TIGR00882 2 TNFWMFGLFFFLYFFIMSAYFPFFPIWLHD-VNGLSK---------T----DTG-IVFSCISLFSILFQPLFGLISDKLG 66 (396)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCH---------H----HHH-HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 456777788899999999999899988876 244331 1 123 4566778889999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCC
Q 012185 318 SRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGG 397 (469)
Q Consensus 318 ~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~ 397 (469)
||+.+..+....+++........... . . ........++.....|+.++..... ...+.++..++
T Consensus 67 rr~~~~~~~~~~~~~~~~~~~~~~~~-~-----~------~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~ 130 (396)
T TIGR00882 67 LKKHLLWIISGLLVLFAPFFIYVFGP-L-----L------QSNILVGAIVGGLYLGFVFSAGAGA----IEAYIEKVSRN 130 (396)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhh-H-----H------HHHHHHHHHHHHHHHHHHhccchhh----HHHHHHHhhhh
Confidence 99999887766654433222111000 0 0 0001122223334455555544333 23333322233
Q ss_pred ccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccCC
Q 012185 398 QGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL 456 (469)
Q Consensus 398 ~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpet 456 (469)
.+..+|.......++..+.+...|.+.+. + ....|.+.++..++.+++.+...||+
T Consensus 131 ~~~~~g~~~~~~~~g~~~g~~~~g~l~~~-~--~~~~f~~~~~~~~~~~~~~~~~~~~~ 186 (396)
T TIGR00882 131 SNFEYGKARMFGCVGWALCASIAGILFSI-D--PQIVFWLGSGFALILMLLLMFAKPKA 186 (396)
T ss_pred cccccchhhhhcccHHHHHHHHHhhhhcc-C--chHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 45667777777778888888777766542 3 34678888888887777565555654
No 150
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.44 E-value=3.3e-06 Score=98.85 Aligned_cols=115 Identities=14% Similarity=-0.002 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
+...++.+...+.+.+.++++||+|||++++.+.++.++..+.+.+.... + +.+..++...+.
T Consensus 51 ~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~--~---------------~~~~l~~~r~l~ 113 (1146)
T PRK08633 51 IVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYL--G---------------WFWLAFAVTFLL 113 (1146)
T ss_pred HHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHH--c---------------cHHHHHHHHHHH
Confidence 55566777788899999999999999999998877665544443333211 1 245566777778
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceec
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDAL 426 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~ 426 (469)
|++.+.....-+++++|+.|++ .+|..+|+.+....+..++.+++.+.+...
T Consensus 114 G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~ 165 (1146)
T PRK08633 114 GAQSAIYSPAKYGIIPELVGKE--NLSRANGLLEAFTIVAILAGTALFSFLFES 165 (1146)
T ss_pred HHHHHhhchHHHhhhHHhcCcc--cchhhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9988888888889999999986 678889999999999999988888877654
No 151
>PRK12382 putative transporter; Provisional
Probab=98.44 E-value=4.9e-06 Score=85.49 Aligned_cols=186 Identities=8% Similarity=-0.049 Sum_probs=114.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCc
Q 012185 239 AMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGS 318 (469)
Q Consensus 239 ~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~ 318 (469)
.+..+...+++..++.....-..+.++.++ ++.|+ ...| +.+..+.+...+.+.+.+++.||+||
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~-lg~s~-------------~~~g-~~~s~~~~~~~i~~~~~G~l~Dr~g~ 80 (392)
T PRK12382 16 SLFRIAFAVFLTYMTVGLPLPVIPLFVHHD-LGFGN-------------TMVG-IAVGIQFLATVLTRGYAGRLADQYGA 80 (392)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhhhHHHHHh-cCCcH-------------HHHH-HHHHHHHHHHHHHhhhhhHHHHhhcc
Confidence 445556666666665544445555555442 34331 1123 44556778888899999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCCc
Q 012185 319 RLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQ 398 (469)
Q Consensus 319 r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~ 398 (469)
|+++..+.+..+++.+......... . . ...+.+..++.-.+.|++.+.......+++.|..|++ ++
T Consensus 81 r~~l~~~~~~~~~~~~~~~~~~~~~-~-----~------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~--~r 146 (392)
T PRK12382 81 KRSALQGMLACGLAGLAYLLAAILP-V-----S------APFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPK--HS 146 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhccc-c-----c------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcc--cc
Confidence 9999998887766543332221100 0 0 0113455566667788888876666667888888875 67
Q ss_pred cchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccCC
Q 012185 399 GLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL 456 (469)
Q Consensus 399 G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpet 456 (469)
|+.+|+......++..+.+...+.+.+..| ....+.+..+..++..+ .....||.
T Consensus 147 ~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g--~~~~~~~~~~~~~~~~~-~~~~~~~~ 201 (392)
T PRK12382 147 GKVMSWNGMAMYGALAAGAPLGLLLHSHFG--FAALALTTMVLPLLAWA-FNGTVRKV 201 (392)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHhccC--hHHHHHHHHHHHHHHHH-HHHhccCC
Confidence 888999998888888887777776665554 22344444444433333 22344554
No 152
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=98.43 E-value=1.8e-06 Score=90.41 Aligned_cols=146 Identities=16% Similarity=0.129 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
+...++.+...+.+.+.+++.||+|||++...+.++.+++.+...+..... + +.....+...+.
T Consensus 65 ~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------------~~~~l~~~~~l~ 128 (438)
T TIGR00712 65 FALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWAT-S---------------SIAIMFVLLFLN 128 (438)
T ss_pred HHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhcccccc-c---------------hHHHHHHHHHHH
Confidence 455567778888899999999999999999988888887765544432100 0 133344445556
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhc
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLK 452 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~ 452 (469)
|+..+........++.|+.|++ .+|+.+|+.++...+...+.+...+.+.+...+ ...+|++.++++++.++..+++
T Consensus 129 g~~~g~~~~~~~~~i~~~~~~~--~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~-w~~~f~~~~~~~~i~~~~~~~~ 205 (438)
T TIGR00712 129 GWFQGMGWPPCGRTMVHWWSQS--ERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFND-WHAALYFPAICAIIVALFAFAM 205 (438)
T ss_pred HHHhhcchHHHHHHHHHhcCcc--cchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHh
Confidence 7766655555567888999876 578889999999998888877655544432222 3467888888888877767777
Q ss_pred ccCCC
Q 012185 453 LPHLS 457 (469)
Q Consensus 453 vpet~ 457 (469)
+||++
T Consensus 206 ~~~~~ 210 (438)
T TIGR00712 206 MRDTP 210 (438)
T ss_pred ccCCH
Confidence 77753
No 153
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=98.43 E-value=2.1e-06 Score=89.29 Aligned_cols=143 Identities=13% Similarity=0.043 Sum_probs=106.5
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
+...++.+...+.+.+.+++.||+|||+++.++.++++++.+...+... ..+.+..++.-.+.
T Consensus 75 ~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~r~l~ 137 (481)
T TIGR00879 75 LVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAF-----------------ALSVEMLIVGRVLL 137 (481)
T ss_pred HHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhcc-----------------ccchHHHHHHHHHH
Confidence 5555677888899999999999999999999999888877665544331 01234566677788
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhcc---ccceecccCccchHHHHHHHHHHHHHHHh
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGA---GPWDALFGGGNIPAFVLASLSALAGGVVA 449 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~---g~l~~~~g~~~~~~f~~~~v~~liaai~~ 449 (469)
|++.+....+..++++|..|++ .+|..+|+.+....+.+++.+... +.+.+..| ..+.|.+.++..++..+ .
T Consensus 138 G~~~~~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~--w~~~f~~~~~~~~~~~~-~ 212 (481)
T TIGR00879 138 GIGVGIASALVPMYLSEIAPKA--LRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLG--WRIPLGLQLIPAGLLFL-G 212 (481)
T ss_pred HhhhhHHHhHHHHHHHccCChh--hhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCcc--HHHHHHHHHHHHHHHHH-H
Confidence 9999988888889999999976 578889999999999999988776 44333333 34667776666665554 5
Q ss_pred hhcccCCC
Q 012185 450 TLKLPHLS 457 (469)
Q Consensus 450 ~~~vpet~ 457 (469)
.+++||+.
T Consensus 213 ~~~l~~~~ 220 (481)
T TIGR00879 213 LFFLPESP 220 (481)
T ss_pred HhcCCCCh
Confidence 56678763
No 154
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.41 E-value=8.8e-06 Score=85.12 Aligned_cols=143 Identities=13% Similarity=0.110 Sum_probs=98.9
Q ss_pred HHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhh
Q 012185 300 VVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAIT 379 (469)
Q Consensus 300 iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~ 379 (469)
+...+.+++.+++.||+|||+++..+.++++++.+.+++...... + ..+.....+++=.+.|++.+..
T Consensus 74 ~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~------~------~~~~~~~l~~~R~l~G~g~g~~ 141 (432)
T PRK10406 74 LMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYET------I------GTWAPALLLLARLFQGLSVGGE 141 (432)
T ss_pred HHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchh------H------HHHHHHHHHHHHHHHHhhhhhh
Confidence 344578889999999999999999999999887776666542100 0 0011234455566789988888
Q ss_pred ccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecc------cCccchHHHHHHHHHHHHHHHhhhcc
Q 012185 380 YSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALF------GGGNIPAFVLASLSALAGGVVATLKL 453 (469)
Q Consensus 380 ~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~------g~~~~~~f~~~~v~~liaai~~~~~v 453 (469)
.....++++|..|++ ++|...++.+.......++.....+.+.... ..+.+..|.++++.+++..+ ....+
T Consensus 142 ~~~~~~~i~e~~p~~--~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~-~~~~~ 218 (432)
T PRK10406 142 YGTSATYMSEVAVEG--RKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALW-LRRQL 218 (432)
T ss_pred HhhHHHHHHHhCCCC--cccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHH-HHhcC
Confidence 888889999999986 5788889888887777777665433322111 11245678888888877654 55667
Q ss_pred cCCC
Q 012185 454 PHLS 457 (469)
Q Consensus 454 pet~ 457 (469)
||++
T Consensus 219 ~e~~ 222 (432)
T PRK10406 219 DETS 222 (432)
T ss_pred CCCc
Confidence 8764
No 155
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=98.41 E-value=1.9e-06 Score=86.77 Aligned_cols=139 Identities=18% Similarity=0.126 Sum_probs=101.0
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
+...++.+...+.+.+.+++.||+|||+++.++.++.+++....++.. +.+..++...+.
T Consensus 42 ~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~ 101 (377)
T TIGR00890 42 IWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIAD--------------------SLAALYLTYGLA 101 (377)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHH--------------------HHHHHHHHHHHH
Confidence 445567778889999999999999999999999988888776666554 244455555578
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhc
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLK 452 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~ 452 (469)
|++.+.........+.++.|+ ++|+.+++.+....++.++.+...+.+.+..| ..+.|.+.++..++.++..+++
T Consensus 102 g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~f~~~~~~~~~~~~~~~~~ 176 (377)
T TIGR00890 102 SAGVGIAYGIALNTAVKWFPD---KRGLASGIIIGGYGLGSFILSPLITSVINLEG--VPAAFIYMGIIFLLVIVLGAFL 176 (377)
T ss_pred hHHHHHHHHhHHHHHHHHcCc---ccHHHHHHHHHhcchhHhHHHHHHHHHHhccc--HHHHHHHHHHHHHHHHHHHHHh
Confidence 888887766666677888774 47888999999888887765544444444333 3467888888887777766666
Q ss_pred ccCC
Q 012185 453 LPHL 456 (469)
Q Consensus 453 vpet 456 (469)
+|+.
T Consensus 177 ~~~~ 180 (377)
T TIGR00890 177 IGYP 180 (377)
T ss_pred eecC
Confidence 6543
No 156
>PRK09952 shikimate transporter; Provisional
Probab=98.41 E-value=5.8e-06 Score=86.79 Aligned_cols=190 Identities=7% Similarity=0.077 Sum_probs=113.8
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHH
Q 012185 244 LIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWA 323 (469)
Q Consensus 244 ~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~ 323 (469)
++..++-|+-...+-+..+..+.++-|.+... .+|.-.+.....+.-+...+.+++.+++.||+|||+++.
T Consensus 28 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~ 98 (438)
T PRK09952 28 FAGAVVDWYDFLLYGITAALVFNREFFPQVSP---------AMGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLM 98 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc---------HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHH
Confidence 44555556655555555555555543432210 122211111111122345677888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCCccchhh
Q 012185 324 ISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIG 403 (469)
Q Consensus 324 ~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~g 403 (469)
++.++++++.+.+++....... ..+.....+++=.+.|++.+.....-.++++|..|++ .+|..++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~--~rg~~~~ 164 (438)
T PRK09952 99 LTVWMMGIATALIGLLPSFSTI------------GWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKN--KKAFYSS 164 (438)
T ss_pred HHHHHHHHHHHHHhcCCcHHHH------------HHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCC--CCcHHHH
Confidence 9999999887777765421100 0011223444555688888876666668999999986 5688899
Q ss_pred HHHHHHHHHHHHHhhccccceeccc------CccchHHHHHHHHHHHHHHHhhhcccCCC
Q 012185 404 VLNLAIVIPQMIVSLGAGPWDALFG------GGNIPAFVLASLSALAGGVVATLKLPHLS 457 (469)
Q Consensus 404 i~n~~i~l~Qil~s~~~g~l~~~~g------~~~~~~f~~~~v~~liaai~~~~~vpet~ 457 (469)
..+....+..++.......+....+ .+.+..|.++++..+++ +.....+||++
T Consensus 165 ~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~-~~l~~~~~es~ 223 (438)
T PRK09952 165 GVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA-LWVRNGMEESA 223 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH-HHHHHhCCCCh
Confidence 9988888887776554443322111 12345788887776654 33555677764
No 157
>TIGR00898 2A0119 cation transport protein.
Probab=98.40 E-value=1.6e-06 Score=92.27 Aligned_cols=136 Identities=13% Similarity=0.070 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
+...++.+...+.+++.+++.||+|||++++++.++.+++.+.+++.. +.+..++.-.+.
T Consensus 131 ~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~--------------------~~~~~~~~r~l~ 190 (505)
T TIGR00898 131 LTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSP--------------------NYTVFLVFRLLV 190 (505)
T ss_pred HHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcc--------------------cHHHHHHHHHHH
Confidence 455566777888899999999999999999999888877766555443 245566777788
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhc
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLK 452 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~ 452 (469)
|++.+....+.+++++|..|++ .+|..+++.+....++.++.+.+...+.+ ..+.|.+.++..++..+. .++
T Consensus 191 G~~~~~~~~~~~~~~~e~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~~~~-----wr~~~~~~~i~~~~~~~~-~~~ 262 (505)
T TIGR00898 191 GMGIGGIWVQAVVLNTEFLPKK--QRAIVGTLIQVFFSLGLVLLPLVAYFIPD-----WRWLQLAVSLPTFLFFLL-SWF 262 (505)
T ss_pred HhhccchHHHHHHHhheecChh--hhHHHHHHHHHHHHHHHHHHHHHHHHhhH-----HHHHHHHHHHHHHHHHHH-HHh
Confidence 9999999999999999999986 56777888888888888777765544432 345677778877777664 477
Q ss_pred ccCC
Q 012185 453 LPHL 456 (469)
Q Consensus 453 vpet 456 (469)
+||+
T Consensus 263 ~~es 266 (505)
T TIGR00898 263 VPES 266 (505)
T ss_pred cCCC
Confidence 8885
No 158
>PRK15011 sugar efflux transporter B; Provisional
Probab=98.40 E-value=6e-06 Score=85.22 Aligned_cols=184 Identities=17% Similarity=0.068 Sum_probs=110.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC
Q 012185 238 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 317 (469)
Q Consensus 238 ~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig 317 (469)
++.+.+.+..|+..++...+..+.+.|+.++ ++-++ . ..| +......+...+.+.+...+.||+|
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~-~~~s~---------~----~~g-~~~~~~~~~~~~~~~~~~~~~dr~g 79 (393)
T PRK15011 15 LTSTAFLIVAFLTGIAGALQTPTLSIFLTDE-VHARP---------A----MVG-FFFTGSAVIGILVSQFLAGRSDKRG 79 (393)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCH---------H----HHH-HHHHHHHHHHHHHHHHHHHHHhccc
Confidence 3556677788888888888888888777552 33221 1 123 1222234445555555555599999
Q ss_pred chHHHH-HHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCC
Q 012185 318 SRLVWA-ISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGG 396 (469)
Q Consensus 318 ~r~l~~-~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~ 396 (469)
|||.++ .+.+..+++.+..++.. +.+..++...+.|...+.....-.+++.+..++++|
T Consensus 80 ~r~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (393)
T PRK15011 80 DRKSLIVFCCLLGVLACTLFAWNR--------------------NYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGR 139 (393)
T ss_pred chhHHHHHHHHHHHHHHHHHHHhh--------------------HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccc
Confidence 998765 45555445444333332 122222222223333333222223455565554434
Q ss_pred CccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccCCCC
Q 012185 397 GQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSS 458 (469)
Q Consensus 397 ~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpet~g 458 (469)
..+...++.+....+.+++.+.+.+.+.+..| ....|.+.++..++.++.+++.+||.+.
T Consensus 140 ~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~g--w~~~f~~~~~~~~~~~~~~~~~~~~~~~ 199 (393)
T PRK15011 140 EAVMFSSFLRAQVSLAWVIGPPLAYALAMGFS--FTVMYLSAAVAFIVCGVMVWLFLPSMRK 199 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcC--hHHHHHHHHHHHHHHHHHHHhhcCccCC
Confidence 45666788888889999999888888776665 3467888888888888777777887653
No 159
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=98.39 E-value=2.5e-06 Score=90.20 Aligned_cols=146 Identities=16% Similarity=0.073 Sum_probs=102.1
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
+....+.+...+...+.+++.||+|+|+++.++.++.+++.+.+++......+ +....+++-.+.
T Consensus 68 ~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~l~~~r~l~ 132 (467)
T PRK09556 68 MIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSV---------------SLGLMIALWALS 132 (467)
T ss_pred HHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccc---------------hHHHHHHHHHHH
Confidence 44455777788889999999999999999998888887766655543210000 355566666678
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceec-ccCccchHHHHHHHHHHHHHHHhhh
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDAL-FGGGNIPAFVLASLSALAGGVVATL 451 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~-~g~~~~~~f~~~~v~~liaai~~~~ 451 (469)
|++.+.......++++|..|++ ++|+.+|+.+....+..++.+.....+.+. .+++....|.+.++..++.++..++
T Consensus 133 G~~~~~~~~~~~~~i~~~~~~~--~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~ 210 (467)
T PRK09556 133 GFFQSTGGPCSYSTITRWTPRR--KRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLR 210 (467)
T ss_pred HHHHhccchHHHHHHHHHcCcc--ceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHH
Confidence 8888877777788999999986 678889999998888888877665544443 2222334577767766666655555
Q ss_pred cccC
Q 012185 452 KLPH 455 (469)
Q Consensus 452 ~vpe 455 (469)
++++
T Consensus 211 ~~~~ 214 (467)
T PRK09556 211 YGSD 214 (467)
T ss_pred hCCC
Confidence 5443
No 160
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.39 E-value=2.1e-06 Score=88.47 Aligned_cols=84 Identities=23% Similarity=0.256 Sum_probs=68.9
Q ss_pred HhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHH
Q 012185 56 LDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVV 135 (469)
Q Consensus 56 lD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i 135 (469)
..++--.+...+..+|+|+.|.+||+++.+++.+.+-+|..+||+.|.. +... ...||+.|...++
T Consensus 131 vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~-----va~~---------~~~Wr~af~~~av 196 (493)
T KOG1330|consen 131 VGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSV-----VASL---------TFWWRWAFRGSAV 196 (493)
T ss_pred hccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeee-----eccC---------ccceEEEEEeehH
Confidence 4444445556688999999999999999999999999999999999975 2111 1258999999999
Q ss_pred HHHHHhhheeEEeeccCC
Q 012185 136 FLTLCALVTIYFADEVPL 153 (469)
Q Consensus 136 ~~~i~~~it~~~v~E~p~ 153 (469)
+.+++.++..++++|+++
T Consensus 197 l~vi~~~L~~~f~~eP~r 214 (493)
T KOG1330|consen 197 LGVIVGLLVFLFVREPER 214 (493)
T ss_pred HHHHHHHHHHhhccCccc
Confidence 999999999999999764
No 161
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.38 E-value=1.8e-06 Score=92.26 Aligned_cols=147 Identities=12% Similarity=0.033 Sum_probs=105.8
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
+....+.+...+.+++.+++.||+|||+++.++.++++++...+++... . .+..+....++.-.+.
T Consensus 60 ~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~---~-----------~~~~~~~~~~~~r~l~ 125 (502)
T TIGR00887 60 AVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPG---S-----------SPKSVMATLCFWRFWL 125 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccC---c-----------ccchHHHHHHHHHHHH
Confidence 3444566778888999999999999999999998888876655544321 0 0111245666777788
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecc---------------------cCcc
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALF---------------------GGGN 431 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~---------------------g~~~ 431 (469)
|++.+.......++++|..|.+ .+|..+++.+.+..+.+++.+.....+.... +...
T Consensus 126 G~~~g~~~~~~~~~~~e~~p~~--~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W 203 (502)
T TIGR00887 126 GVGIGGDYPLSAIITSEFATKK--WRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMW 203 (502)
T ss_pred HHHHhhhhHHHHHHHHHhcChh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccH
Confidence 9999988888889999999987 6788899999999999888776554332111 1123
Q ss_pred chHHHHHHHHHHHHHHHhhhcccCC
Q 012185 432 IPAFVLASLSALAGGVVATLKLPHL 456 (469)
Q Consensus 432 ~~~f~~~~v~~liaai~~~~~vpet 456 (469)
...|.++++.+++..+ ..+++||+
T Consensus 204 R~~~~~~~ip~~i~~~-~~~~lpES 227 (502)
T TIGR00887 204 RILIGFGAVPALLALY-FRLTIPET 227 (502)
T ss_pred HHHHHHHHHHHHHHHH-HHHhCCCC
Confidence 4567777777776655 55778997
No 162
>PRK09528 lacY galactoside permease; Reviewed
Probab=98.38 E-value=6e-06 Score=85.89 Aligned_cols=185 Identities=16% Similarity=0.104 Sum_probs=109.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC
Q 012185 238 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 317 (469)
Q Consensus 238 ~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig 317 (469)
+.++.+.+..|+.++++..+.-|.+.|+.++ ++-++ .+ .| +...++.+...+.+.+.+++.||+|
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g~s~---------~~----~g-~~~s~~~l~~~i~~~~~G~l~Dr~g 74 (420)
T PRK09528 10 PNYWIFSLFFFFFFFIWSSWFSFFPIWLHDI-NGLSG---------TD----TG-IIFSANSLFALLFQPLYGLISDKLG 74 (420)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCCH---------HH----HH-HHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3566677778888888877788888877662 33221 12 22 4455677888999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCC
Q 012185 318 SRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGG 397 (469)
Q Consensus 318 ~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~ 397 (469)
||++..++..+.+++........... . . ........++.....|..+.. ...++.++.++..|.
T Consensus 75 ~r~~~~~~~~~~~~~~~~~~~~~~~~-~-----~------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 138 (420)
T PRK09528 75 LKKHLLWIISGLLVLFGPFFIYVFAP-L-----L------QYNILLGAIVGGIYLGFGFLA----GAGAIEAYIERVSRR 138 (420)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHH-H-----H------HHHHHHHHHHHHHHhhhhhcc----chhhhhhHHHHHHhh
Confidence 99998887666554432221111000 0 0 000011111111222333222 222333333322245
Q ss_pred ccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccCC
Q 012185 398 QGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL 456 (469)
Q Consensus 398 ~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpet 456 (469)
+|..+|..+....+++.+.+...|.+.+. + ....|.+.++.++++.+..++..||+
T Consensus 139 ~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~--~~~~f~~~~~~~~~~~~~~~~~~~~~ 194 (420)
T PRK09528 139 SGFEYGRARMWGSLGWALCAFIAGILFNI-N--PQINFWLGSGSALILLVLLFFAKPDA 194 (420)
T ss_pred ccccchhhHHhhhHHHHHHHHHHHHHHhc-C--chHhHHHHHHHHHHHHHHHhcccccc
Confidence 78889999999999999988888877543 3 23678888887777776555555443
No 163
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=98.37 E-value=2.3e-05 Score=83.95 Aligned_cols=99 Identities=12% Similarity=0.080 Sum_probs=70.5
Q ss_pred HHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhh
Q 012185 309 IEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITA 388 (469)
Q Consensus 309 ~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLis 388 (469)
.+++.||++.++.+.+|.++.+++++.+.+......+ + ...+.+..+....+.|++-....-+-.+++.
T Consensus 340 ~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~~~~--~---------~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~ 408 (500)
T PRK09584 340 YNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKFAND--A---------GIVSVNWLIASYGLQSIGELMISGLGLAMVA 408 (500)
T ss_pred HHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHhcCC--C---------CccCHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 3566666666677888999999988877665422100 0 0012334556667778888888888888999
Q ss_pred ccccCCCCCccchhhHHHHHHHHHHHHHhhcc
Q 012185 389 ELTADSGGGQGLAIGVLNLAIVIPQMIVSLGA 420 (469)
Q Consensus 389 e~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~ 420 (469)
+..|++ .+|..+|+..++..+++.+.+.+.
T Consensus 409 ~~aP~~--~rg~~~g~~~l~~a~g~~~~g~~~ 438 (500)
T PRK09584 409 QLVPQR--LMGFIMGSWFLTTAGAALIAGYVA 438 (500)
T ss_pred HhCcHH--HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999986 789999999888888888776655
No 164
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=98.35 E-value=4.3e-06 Score=89.72 Aligned_cols=177 Identities=16% Similarity=0.124 Sum_probs=122.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC
Q 012185 238 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 317 (469)
Q Consensus 238 ~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig 317 (469)
|.++.+|+.++++.+|-....+=.+-+|.+ . .++ ...+| +......+-.++.+++.+.++||++
T Consensus 10 ~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~-l-t~S-------------~~~va-lv~~a~~LP~~Llsl~aG~laDr~d 73 (524)
T PF05977_consen 10 RNFRRLWIAQLISNLGDWMQTVALAWLVTQ-L-TGS-------------PLMVA-LVQAASTLPILLLSLFAGALADRFD 73 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-hCC-------------HHHHH-HHHHHHHHHHHHHHHHHHHHhhccc
Confidence 457777777777666543333333322222 1 221 11222 2333445566788899999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCC
Q 012185 318 SRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGG 397 (469)
Q Consensus 318 ~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~ 397 (469)
|||+.+.++++.++..+..++.... + ..+.+..+++..+.|++.+.....=.+++.|..|++ .
T Consensus 74 rrrili~~~~~~~~~~~~L~~l~~~--~-------------~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~--~ 136 (524)
T PF05977_consen 74 RRRILILSQLLRALVALLLAVLAFF--G-------------LLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKE--D 136 (524)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHh--C-------------cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHh--h
Confidence 9999999999887765555544321 1 124666777778889888887777788999999976 5
Q ss_pred ccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHh
Q 012185 398 QGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVA 449 (469)
Q Consensus 398 ~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~ 449 (469)
.....++.++...+.+++.+.++|.++...|. ..+|.+-+++.+++.+..
T Consensus 137 L~~A~al~s~~~niar~iGPalgG~Lva~~G~--~~~f~inalsfl~~i~~l 186 (524)
T PF05977_consen 137 LPAANALNSISFNIARIIGPALGGILVAFFGA--AAAFLINALSFLISILAL 186 (524)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHHHHHHH--HHHHHHHHHHHHHHHHHH
Confidence 66778999999999999999999998888874 367888887766655433
No 165
>PRK03699 putative transporter; Provisional
Probab=98.34 E-value=1.3e-05 Score=82.79 Aligned_cols=134 Identities=13% Similarity=0.002 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhc
Q 012185 294 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLG 373 (469)
Q Consensus 294 ~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 373 (469)
....+.+...+.+++.+++.||+|||++...+.++.+++.+.+.+.. +.+..++...+.|
T Consensus 47 ~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~--------------------~~~~~~~~~~l~G 106 (394)
T PRK03699 47 TFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSH--------------------SLALFSIAMFVLG 106 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcc--------------------hHHHHHHHHHHHH
Confidence 34456667778888999999999999999998888877766555432 2444556666778
Q ss_pred cchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhh
Q 012185 374 FPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVAT 450 (469)
Q Consensus 374 i~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~ 450 (469)
++.+.......+++.|..|++ .+|..+++.+....+...+.+...+.++.... +..+.|.+.++..++..++.+
T Consensus 107 ~~~g~~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~-gw~~~f~~~~~~~~~~~~~~~ 180 (394)
T PRK03699 107 VVSGITMSIGTFLITHVYEGK--QRGSRLLFTDSFFSMAGMIFPIIAAYLLARSI-EWYWVYACIGLVYVAIFILTL 180 (394)
T ss_pred HhhHhhccchhHHhhhhcccc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHHHHHHHH
Confidence 888877777778899999875 57888888888777777777766665543221 234567776776666555443
No 166
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=98.33 E-value=1.1e-05 Score=85.87 Aligned_cols=136 Identities=16% Similarity=0.066 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhcc
Q 012185 295 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGF 374 (469)
Q Consensus 295 l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi 374 (469)
..++.+...+..++.+++.||+|||++..++.++.+++++.+++... ....++...+.|+
T Consensus 77 ~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s--------------------~~~l~~~r~l~G~ 136 (476)
T PLN00028 77 GIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSS--------------------ATGFIAVRFFIGF 136 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcC--------------------HHHHHHHHHHHHH
Confidence 34455566777889999999999999999888888877665555431 2333344455676
Q ss_pred chhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceec---cc----CccchHHHHHHHHHHHHHH
Q 012185 375 PLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDAL---FG----GGNIPAFVLASLSALAGGV 447 (469)
Q Consensus 375 ~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~---~g----~~~~~~f~~~~v~~liaai 447 (469)
+.+... .....++|+.|.+ .+|+.+|+.+....+.-.+.+.+.+.+... .+ .+..++|++.+++.++.++
T Consensus 137 ~~~~~~-~~~~~i~~~~~~~--~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l 213 (476)
T PLN00028 137 SLATFV-SCQYWMSTMFNGK--IVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGI 213 (476)
T ss_pred HHHhhH-HHHHHHHHhcChh--heeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHH
Confidence 666432 2345678999875 678889998765544444443333332211 00 1235678888888877776
Q ss_pred Hhhhcc
Q 012185 448 VATLKL 453 (469)
Q Consensus 448 ~~~~~v 453 (469)
..+++.
T Consensus 214 ~~~~~~ 219 (476)
T PLN00028 214 LVLTLG 219 (476)
T ss_pred HHHHHc
Confidence 555443
No 167
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.33 E-value=8.8e-06 Score=95.46 Aligned_cols=145 Identities=12% Similarity=0.002 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHH
Q 012185 291 GAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFT 370 (469)
Q Consensus 291 G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (469)
..+...++.+..++.+.+.++++||+|||++.........+.+....+.. .. + +.+..+++..
T Consensus 54 ~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~-~~-~---------------s~~~l~~~~~ 116 (1140)
T PRK06814 54 VTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGF-HL-N---------------SVPLLFAALF 116 (1140)
T ss_pred HHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHH-HH-h---------------hHHHHHHHHH
Confidence 34556667788889999999999999999976442222211111111111 00 1 3566777888
Q ss_pred HhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhh
Q 012185 371 LLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVAT 450 (469)
Q Consensus 371 ~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~ 450 (469)
+.|++.+....+..+++.+..|++ .++..+|+.+....+++++.+.+.|.+....| ..+.|+..+++.+++.+ +.
T Consensus 117 l~gi~~a~~~p~~~a~l~~~~~~~--~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~--~~~~~~~~~~~~~~~~~-~~ 191 (1140)
T PRK06814 117 LMGIHSALFGPIKYSILPDHLNKD--ELLGANALVEAGTFIAILLGTIIGGLATISGN--FVILVALLMGIAVLGWL-AS 191 (1140)
T ss_pred HHHHHHHhhchHHHHhhHhhcCcc--ccchhhHHHHHHHHHHHHHHHHHHHHHHhccc--cHHHHHHHHHHHHHHHH-HH
Confidence 899999999999999999999986 57778999999999999999999998877654 23556444444444443 66
Q ss_pred hcccCCC
Q 012185 451 LKLPHLS 457 (469)
Q Consensus 451 ~~vpet~ 457 (469)
+++|+++
T Consensus 192 ~~~~~~~ 198 (1140)
T PRK06814 192 LFIPKTG 198 (1140)
T ss_pred hhCCCCC
Confidence 6777664
No 168
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=98.33 E-value=8.9e-06 Score=82.38 Aligned_cols=141 Identities=13% Similarity=0.117 Sum_probs=93.8
Q ss_pred HHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhcc
Q 012185 302 LGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYS 381 (469)
Q Consensus 302 ~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~ 381 (469)
..+.+.+.+++.||+|||+++.++.++++++.+..++....... ..+.....++.-.+.|++.+....
T Consensus 48 ~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~r~l~G~~~~~~~~ 115 (394)
T TIGR00883 48 RPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATI------------GIWAPILLLLARLIQGFSLGGEWG 115 (394)
T ss_pred hhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhh------------HHHHHHHHHHHHHHHHhhcccccc
Confidence 34677889999999999999999999888877666554321000 001122344555678888887777
Q ss_pred ccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceeccc------CccchHHHHHHHHHHHHHHHhhhcccC
Q 012185 382 VPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFG------GGNIPAFVLASLSALAGGVVATLKLPH 455 (469)
Q Consensus 382 vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g------~~~~~~f~~~~v~~liaai~~~~~vpe 455 (469)
...++++|..|++ .+|..+++.+....+.+++.+...+.+....+ .+....|.+.++..+++.+ .....||
T Consensus 116 ~~~~~~~~~~~~~--~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~-~~~~~~~ 192 (394)
T TIGR00883 116 GAALYLAEYAPPG--KRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLY-LRRNLEE 192 (394)
T ss_pred ccHHHhhhcCCcc--cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHH-HHHhcCC
Confidence 7778999999876 67888999999999998887765544322111 1123556676666665544 4455666
Q ss_pred CC
Q 012185 456 LS 457 (469)
Q Consensus 456 t~ 457 (469)
++
T Consensus 193 ~~ 194 (394)
T TIGR00883 193 TP 194 (394)
T ss_pred Ch
Confidence 53
No 169
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=98.32 E-value=8e-06 Score=86.02 Aligned_cols=146 Identities=15% Similarity=0.111 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
+....+.+...+.+.+.+++.||+|||++++++.++.+++.+..++..... .+....+++..+.
T Consensus 67 ~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~----------------~~~~~~~~~~~l~ 130 (452)
T PRK11273 67 FALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWAT----------------SSIAVMFVLLFLC 130 (452)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhccc----------------ccHHHHHHHHHHH
Confidence 444566677888899999999999999999999988888776555542100 0233444555566
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhc
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLK 452 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~ 452 (469)
|+..+.....--+++.|..|++ .+|+.+|+.|....+...+.+...+....... +..+.|++.++..++.++...++
T Consensus 131 gi~~g~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~-gw~~~f~i~~~~~~~~~~l~~~~ 207 (452)
T PRK11273 131 GWFQGMGWPPCGRTMVHWWSQK--ERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFN-DWHAALYMPAFAAILVALFAFAM 207 (452)
T ss_pred HHHHhccchHHHHHHHHhCChH--HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHH
Confidence 7766644332245777888765 57888999988887775433322211111112 23457777777777766667777
Q ss_pred ccCCC
Q 012185 453 LPHLS 457 (469)
Q Consensus 453 vpet~ 457 (469)
+||+.
T Consensus 208 ~~~~~ 212 (452)
T PRK11273 208 MRDTP 212 (452)
T ss_pred ccCCH
Confidence 77653
No 170
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.32 E-value=6.6e-06 Score=87.14 Aligned_cols=199 Identities=12% Similarity=0.041 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhh----h
Q 012185 240 MHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCR----W 315 (469)
Q Consensus 240 l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~----~ 315 (469)
+.++|.+.+--.++|....-|.+.|+.+ ++-+ . ....+...+..+..++...+.+.++| |
T Consensus 6 li~~~~~~~Giq~~~~l~~~~l~~yl~~--lg~~------------~--~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr 69 (477)
T TIGR01301 6 LLRVASVAAGVQFGWALQLSLLTPYVQE--LGIP------------H--AWASIIWLCGPLSGLLVQPLVGYLSDRCTSR 69 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCC------------H--HHHHHHHHHHHHHHHHHHhHeeehhcCCCCC
Confidence 4445666666677788777787777644 2322 1 11124445566777888888899999 5
Q ss_pred cCchHHHHHH-HHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCC
Q 012185 316 IGSRLVWAIS-NFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADS 394 (469)
Q Consensus 316 ig~r~l~~~s-~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~ 394 (469)
+||||.++.+ .+..++++..+++...... ...+.... ....+.....++.+.+..++......---++++|..|++
T Consensus 70 ~GRRrp~il~g~~~~~~~l~ll~~~~~~~~--~~~~~~~~-~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~ 146 (477)
T TIGR01301 70 FGRRRPFIAAGAALVAFAVILIGFAADIGH--LFGDNLDK-KTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGD 146 (477)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHhCchhhh--hccccccc-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCch
Confidence 9999999874 5555555555544321100 00000000 000011122233333445555544444457999999988
Q ss_pred CCCccchhhHHHHHHHHHHHHHhhccccce--ecc-----------cCccchHHHHHHHHHHHHHHHhhhcccCCC
Q 012185 395 GGGQGLAIGVLNLAIVIPQMIVSLGAGPWD--ALF-----------GGGNIPAFVLASLSALAGGVVATLKLPHLS 457 (469)
Q Consensus 395 ~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~--~~~-----------g~~~~~~f~~~~v~~liaai~~~~~vpet~ 457 (469)
+|+.+...+..+.+..+.+++.....+... +.+ ..+....|.+++++.+++.+.+++.+||..
T Consensus 147 ~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 147 ARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 777788899999999999999887665431 111 112346799999999999998889999964
No 171
>PRK15075 citrate-proton symporter; Provisional
Probab=98.27 E-value=2.5e-05 Score=81.75 Aligned_cols=189 Identities=13% Similarity=0.087 Sum_probs=109.2
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHH-HHHHHHHHHHHHHhHHHhhhhcCch
Q 012185 241 HVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFG-LLLNSVVLGVSSFLIEPMCRWIGSR 319 (469)
Q Consensus 241 ~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~-l~i~~iv~~i~s~i~~~l~~~ig~r 319 (469)
-.+++..|+.++-...+.++.+....| |+.++. +++.-..+.. .....+...+.+++.+++.||+|||
T Consensus 18 ~~~~~~~~~~~~d~~~~~~~~~~i~~~--~~~~~~---------~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr 86 (434)
T PRK15075 18 LRVTSGNFLEMFDFFLFGFYATAIAKT--FFPAGN---------EFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRR 86 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH--hCCCCC---------chHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchH
Confidence 345667777777777777777765544 443321 1221111111 1111222345678889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCCcc
Q 012185 320 LVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQG 399 (469)
Q Consensus 320 ~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G 399 (469)
++++.+.++++++.+.+++...... . ..+.....++.-.+.|++.+.....-.++++|..|++ .+|
T Consensus 87 ~~l~~~~~~~~~~~~l~~~~~~~~~------~------~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~--~rg 152 (434)
T PRK15075 87 KGLIVTLSIMASGTLLIAFVPGYAT------I------GLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPG--RKG 152 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhCCcHHH------H------HHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcc--cch
Confidence 9999999998887776665542100 0 0000112345556678887765554457899999986 678
Q ss_pred chhhHHHHHHHHHHHHHhhccccce--------ecccCccchHHHHHHHHHHHHHHHhhhcccCCC
Q 012185 400 LAIGVLNLAIVIPQMIVSLGAGPWD--------ALFGGGNIPAFVLASLSALAGGVVATLKLPHLS 457 (469)
Q Consensus 400 ~~~gi~n~~i~l~Qil~s~~~g~l~--------~~~g~~~~~~f~~~~v~~liaai~~~~~vpet~ 457 (469)
+.+++.+....++..+.+...+.+. +..| ....|.++.+..++ .++.....||++
T Consensus 153 ~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~g--Wr~~f~~~~~~~~~-~~~~~~~~~e~~ 215 (434)
T PRK15075 153 FYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWG--WRIPFLIGCLIVPF-IFLIRRSLEETE 215 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccc--hHHHHHHHHHHHHH-HHHHHHhcCCCH
Confidence 8899888776666655544433321 2222 34567665543322 222344567753
No 172
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=98.26 E-value=8.3e-06 Score=86.09 Aligned_cols=134 Identities=14% Similarity=0.058 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHH-HHhc
Q 012185 295 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVF-TLLG 373 (469)
Q Consensus 295 l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G 373 (469)
..++.+...+...+.+++.||+|||++++.+.++++++.+..++... .+..++.. .+.|
T Consensus 60 ~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~--------------------~~~l~~~~~~l~G 119 (455)
T TIGR00892 60 SSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSN--------------------VIELYLTAGFITG 119 (455)
T ss_pred HHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhh--------------------HHHHHHHHHHHHH
Confidence 33444555667778899999999999999998888776655544431 22222222 4557
Q ss_pred cchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcc
Q 012185 374 FPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKL 453 (469)
Q Consensus 374 i~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~v 453 (469)
++.+.......+++.++.++ .+|+.+|+.+....+...+.+...+.+.+..| ..+.|.+.+++.+++.++.++..
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~---~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~g--wr~~f~~~~~~~~~~~v~~~~~~ 194 (455)
T TIGR00892 120 LGLAFNFQPSLTMLGKYFYR---RRPLANGLAMAGSPVFLSTLAPLNQYLFESFG--WRGSFLILGGLLLHCCVCGALMR 194 (455)
T ss_pred hcchhhhhHHHHHHHHHHHh---hHHHHHHHHHhcccHHHHHHHHHHHHHHHHhC--hHHHHHHHHHHHHHHHHHHHHhC
Confidence 77776545556788888863 57888999999999998888877777776665 34678888777776655444333
No 173
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=98.24 E-value=1.1e-06 Score=90.46 Aligned_cols=139 Identities=15% Similarity=0.066 Sum_probs=114.4
Q ss_pred HHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccc
Q 012185 296 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFP 375 (469)
Q Consensus 296 ~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~ 375 (469)
.++.++..++|=+.+.+.||++||+++.+|..+.++++++.++.. ..+..+++=.+.|++
T Consensus 75 ~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~--------------------~Fwq~~l~R~~vGiG 134 (493)
T KOG1330|consen 75 TVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSN--------------------HFWQVLLCRGFVGIG 134 (493)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHH--------------------HHHHHHHHHHHhccc
Confidence 456778888898999999999999999999999999888877774 267788888999999
Q ss_pred hhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccC
Q 012185 376 LAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPH 455 (469)
Q Consensus 376 ~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpe 455 (469)
-|.+..+--+++++.+|+. .++..+|++|.++.+.-.+.-+..+.+-+..+ ..++.|...++.+++.++++.++++|
T Consensus 135 eAs~~~ia~s~IaD~f~~~--~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~-~Wr~af~~~avl~vi~~~L~~~f~~e 211 (493)
T KOG1330|consen 135 EASYSPIAPSLIADSFPDD--KRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF-WWRWAFRGSAVLGVIVGLLVFLFVRE 211 (493)
T ss_pred hhhhcccchhHhhhcCcch--hhhHHHHHhhhhcccccceeEEeeeeeccCcc-ceEEEEEeehHHHHHHHHHHHhhccC
Confidence 9999999999999999987 56777999999988875554433333333333 25678999999999999989999998
Q ss_pred CC
Q 012185 456 LS 457 (469)
Q Consensus 456 t~ 457 (469)
++
T Consensus 212 P~ 213 (493)
T KOG1330|consen 212 PE 213 (493)
T ss_pred cc
Confidence 87
No 174
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=98.23 E-value=1.1e-05 Score=83.35 Aligned_cols=130 Identities=13% Similarity=-0.002 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
+...++.+...+.+.+.+++.||+|||+++..+.++++++++..++.. +.+..++.-.+.
T Consensus 48 ~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~--------------------~~~~ll~~r~l~ 107 (393)
T PRK09705 48 LLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYP--------------------QSALLLSSALLG 107 (393)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCc--------------------chHHHHHHHHHH
Confidence 555566777888899999999999999999999999999888777664 244556667778
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHH
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGG 446 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaa 446 (469)
|++.+.......+++.+..|+ ++|..+|+++....+...+.+.+.+.+.+..++ ....+...++..+++.
T Consensus 108 Gig~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~-w~~~~~~~~~~~~~~~ 177 (393)
T PRK09705 108 GVGIGIIQAVMPSVIKRRFQQ---RTPLVMGLWSAALMGGGGLGAAITPWLVQHSET-WYQTLAWWALPAVVAL 177 (393)
T ss_pred HhHHHHHhhhhhHHHHHHccc---cchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHH
Confidence 998888777777888888873 468889999988888888877777766554322 2234444444444433
No 175
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.17 E-value=2.2e-05 Score=82.52 Aligned_cols=116 Identities=14% Similarity=0.150 Sum_probs=70.8
Q ss_pred CeeehhHHHHHHHHHhhcchhhHhhhcCCCcccccccCCCccchhhHHHHHHHHHhccccccchhHHHHHhcCCCc--cc
Q 012185 2 HIKVRKKTAIYSCRMSDDFCCYIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGP--DQ 79 (469)
Q Consensus 2 pfi~~g~~~~~i~llll~~~~~i~~~l~d~~~~~~~~~~~~~~~i~~~v~g~~llD~a~n~~~~p~rAli~D~~p~--~q 79 (469)
||+++|+++.+++++.++.-..- . .....+.+.+++..++.-.+...+.+++.|.... +.
T Consensus 60 ~Y~~i~~~~~~~~~~~~~~~~~~-------~-----------~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~ 121 (433)
T PF03092_consen 60 PYMIIGWLLGAVSALVLALLPAS-------E-----------SSAAIAVVLLFLASFGYAFADVAADALVVELARREPES 121 (433)
T ss_pred HHHHHHHHHHHHHHHHHHhcccc-------c-----------chhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCch
Confidence 78999998886666654432110 0 0111223344445555555666778888888853 33
Q ss_pred hhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHHhhheeEEeec
Q 012185 80 RNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADE 150 (469)
Q Consensus 80 r~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~~~it~~~v~E 150 (469)
++...++......+|+++|..+++.. .+ ....|..|.++++...+.++..++..+|
T Consensus 122 ~g~lqS~~~~~~~~G~lv~~~l~G~l-~~--------------~~~~~~~f~i~~~~~~l~~~~~~~~~~e 177 (433)
T PF03092_consen 122 RGDLQSFVWGVRSVGSLVGSLLSGPL-LD--------------SFGPQGVFLISAALPLLMLIVALFLLEE 177 (433)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhh-hh--------------cCCCeEEehHHHHHHHHHHHHHHHhhhh
Confidence 66777788788889999998777652 11 1234566777776665555555555555
No 176
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=98.16 E-value=2e-05 Score=80.92 Aligned_cols=138 Identities=14% Similarity=0.135 Sum_probs=113.4
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
+...+|+....+.+.++..+.+|+.||+++.....+|.++-+..++.. +....++.=...
T Consensus 52 ~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp--------------------~f~~Ll~aR~~~ 111 (394)
T COG2814 52 QLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAP--------------------SFAVLLLARALA 111 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhc--------------------cHHHHHHHHHHH
Confidence 455569999999999999999999999999999999988877666664 245556666677
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhc
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLK 452 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~ 452 (469)
|++.+.+..+-.++.++..|++ ++|..+|+.+.-..+++++-......+=+.+| .+.+|.+-+++++++.+..++.
T Consensus 112 g~a~G~f~~i~~~~a~~lvpp~--~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~G--WR~~F~~ia~l~ll~~~~~~~~ 187 (394)
T COG2814 112 GLAHGVFWSIAAALAARLVPPG--KRGRALALVFTGLTLATVLGVPLGTFLGQLFG--WRATFLAIAVLALLALLLLWKL 187 (394)
T ss_pred HHHHHHHHHHHHHHHHHHcCcc--chhhHHHHHHHHHHHHHHHhccHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHHHh
Confidence 8888888888888999999987 67777999999999998886655545545665 4678999999999999988899
Q ss_pred cc
Q 012185 453 LP 454 (469)
Q Consensus 453 vp 454 (469)
+|
T Consensus 188 lP 189 (394)
T COG2814 188 LP 189 (394)
T ss_pred CC
Confidence 99
No 177
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.15 E-value=8.7e-06 Score=82.48 Aligned_cols=143 Identities=15% Similarity=0.174 Sum_probs=112.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHH
Q 012185 289 REGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVV 368 (469)
Q Consensus 289 ~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (469)
++| +-+..++++..+.+-+.+.++||+|+|..+++|.+++..+-+..++-. ...+.++.
T Consensus 107 ~iG-~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~--------------------sy~~l~vA 165 (464)
T KOG3764|consen 107 QIG-LLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGN--------------------SYPMLFVA 165 (464)
T ss_pred chh-HHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcc--------------------hhHHHHHH
Confidence 345 445567789999999999999999999999999988876544433332 14466677
Q ss_pred HHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHH
Q 012185 369 FTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVV 448 (469)
Q Consensus 369 ~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~ 448 (469)
=++-|++.|...+.-.+++++.+|++ ..+|..||+.--++.+.-++.+...|.+=+..|.. ..|.+-+..+++.+..
T Consensus 166 R~LQgvgsA~~~tsglamlAd~f~~d-~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~--aPFlVL~~v~Lld~~L 242 (464)
T KOG3764|consen 166 RSLQGVGSAFADTSGLAMLADVFPED-NERGSVMGIALGFISLGVLVGPPFGGILYEFAGKS--APFLVLAIVLLLDGAL 242 (464)
T ss_pred HHHhhhhHHHHHhhhHHHHHHHcccc-hhhhHHHHHHHHHHhccceecCCcccchHhhcCCc--CcHHHHHHHHHHHHHH
Confidence 78899999999999999999999986 46799999999999999999988888777777743 5677777777777775
Q ss_pred hhhcccC
Q 012185 449 ATLKLPH 455 (469)
Q Consensus 449 ~~~~vpe 455 (469)
..+.++-
T Consensus 243 ~l~vi~p 249 (464)
T KOG3764|consen 243 QLLVIEP 249 (464)
T ss_pred HHheeCc
Confidence 5555443
No 178
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.07 E-value=2.7e-05 Score=78.81 Aligned_cols=133 Identities=14% Similarity=0.083 Sum_probs=88.8
Q ss_pred HHhHHHhhhhc-----CchHHHH-HHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhh
Q 012185 306 SFLIEPMCRWI-----GSRLVWA-ISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAIT 379 (469)
Q Consensus 306 s~i~~~l~~~i-----g~r~l~~-~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~ 379 (469)
.++.++++||+ ||||.|+ .+.+.++++++.+++... ....+.......+.+...+..
T Consensus 38 ~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~-----------------~~~l~~l~~~~~~~~~~~~~~ 100 (356)
T TIGR00901 38 KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVP-----------------STDLPLLAGLAFLIAFFSATQ 100 (356)
T ss_pred HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCc-----------------chhHHHHHHHHHHHHHHHHHH
Confidence 67888899997 8999875 577777776555544321 011222333333344444433
Q ss_pred ccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCc------cchHHHHHHHHHHHHHHHhhhcc
Q 012185 380 YSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGG------NIPAFVLASLSALAGGVVATLKL 453 (469)
Q Consensus 380 ~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~------~~~~f~~~~v~~liaai~~~~~v 453 (469)
...--+++.|..|++ ++|...|+......+.+++.+.+.+.+.+..|.+ ....|.+.+++.+++.+..++..
T Consensus 101 ~~~~~a~~~~~~~~~--~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~ 178 (356)
T TIGR00901 101 DIALDAWRLEILSDE--ELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLA 178 (356)
T ss_pred HHHHHHHHHHhCCHh--hhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhc
Confidence 333356889999876 5677899999999999999988887776655521 34678888888888777556667
Q ss_pred cCCC
Q 012185 454 PHLS 457 (469)
Q Consensus 454 pet~ 457 (469)
||++
T Consensus 179 ~e~~ 182 (356)
T TIGR00901 179 KEPQ 182 (356)
T ss_pred cCCC
Confidence 7764
No 179
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=98.07 E-value=1.8e-05 Score=83.43 Aligned_cols=141 Identities=8% Similarity=-0.055 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
+.+..+.+...+..++.+++.||+|+|+++..+.++.+++.+.+.+... + ..+..++.-.+.
T Consensus 80 ~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~---~---------------~~~~l~~~r~~~ 141 (465)
T TIGR00894 80 LILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAG---G---------------GIALVVFCRVIQ 141 (465)
T ss_pred HHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHH---c---------------CchHHHHHHHHH
Confidence 3444566778888999999999999999999888877665544433221 0 133455566678
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecc-cCccchHHHHHHHHHHHHHHHhhh
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALF-GGGNIPAFVLASLSALAGGVVATL 451 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~-g~~~~~~f~~~~v~~liaai~~~~ 451 (469)
|++.+.....-.++++|..|++ .+|+.+|+.+....+.+++.+.+.+.+.+.. | ....|.+.++..++.+++.+.
T Consensus 142 G~~~~~~~~~~~~~~~~~~~~~--~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~g--w~~~f~i~~~~~~~~~~~~~~ 217 (465)
T TIGR00894 142 GLAQGSVSPATHKIIVKWAPPK--ERSRLLGMSTSGFQLGTFIFLPISGWLCESWGG--WPMIFYVFGIVGCAWSLLWFV 217 (465)
T ss_pred HHhcccchhhHHHHHHhcCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC--CCeehhhhhHHHHHHHHHHHH
Confidence 9999988887788999999976 6789999999999999999988888776653 4 346788888877777665555
Q ss_pred cccC
Q 012185 452 KLPH 455 (469)
Q Consensus 452 ~vpe 455 (469)
..||
T Consensus 218 ~~~~ 221 (465)
T TIGR00894 218 FPAD 221 (465)
T ss_pred HhcC
Confidence 5554
No 180
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.06 E-value=7.1e-05 Score=80.99 Aligned_cols=108 Identities=11% Similarity=0.082 Sum_probs=61.3
Q ss_pred eeehhHHHHHHHHHhhcchhhHhhhcCCCcccccccCCCccchhhHHHHHHHHHhccccccchhHHHHHhcCCCccchhh
Q 012185 3 IKVRKKTAIYSCRMSDDFCCYIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNS 82 (469)
Q Consensus 3 fi~~g~~~~~i~llll~~~~~i~~~l~d~~~~~~~~~~~~~~~i~~~v~g~~llD~a~n~~~~p~rAli~D~~p~~qr~~ 82 (469)
++++|.++.++|....+-++++...+ .|..+..++.... ......++|+.|.+.|..
T Consensus 110 ~~i~g~~l~vvG~Iv~atA~~~~~~i----------------------ag~~l~GvgaG~~-~~~~~~isEl~p~k~R~~ 166 (599)
T PF06609_consen 110 FFIIGSLLGVVGSIVCATAQNMNTFI----------------------AGMVLYGVGAGVQ-ELAALAISELVPNKWRGL 166 (599)
T ss_pred HHHHHHHHHHhHHHHhhcCCcHHHHH----------------------HHHHHHHHhhHHH-HHHHHHHHHhcccchhhh
Confidence 44566666666666666555553332 2444444443333 345666999999999987
Q ss_pred HHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHHhhheeEEe
Q 012185 83 ANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFA 148 (469)
Q Consensus 83 a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~~~it~~~v 148 (469)
+..+... ..+.....+.. |.+.+. ...+|||.|++.++...++++++.++.
T Consensus 167 ~~~~~~~----~~i~~~~~~~~--ia~~~~---------~~~~WRw~~~~~~i~~~i~~vl~~~fY 217 (599)
T PF06609_consen 167 GLAIASI----PFIITTWISPL--IAQLFA---------AHSGWRWIFYIFIIWSGIALVLIFFFY 217 (599)
T ss_pred HhHHHHH----HHHhhhcccHH--HHHHhc---------cCCCcchHHHHHHHHHHHHHHHHHHHh
Confidence 7765543 23333223321 222110 124899999999887666665554444
No 181
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=98.04 E-value=0.00011 Score=77.47 Aligned_cols=146 Identities=18% Similarity=0.091 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhc
Q 012185 294 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLG 373 (469)
Q Consensus 294 ~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 373 (469)
...+..+...+.-++.+++.||+|.|++..++.++.++..+.+++... + . ..+....+++-.+.|
T Consensus 75 l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~---~-----~-------~~s~~~lli~r~l~G 139 (462)
T PRK15034 75 LTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQ---N-----P-------NTPFGIFIVIALLCG 139 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHc---c-----c-------CCCHHHHHHHHHHHH
Confidence 334455666777788899999999999999999888877766665410 0 0 002455666667777
Q ss_pred cchhhhccccchhhhccccCCCCCccchhhHH----HHHHHHHHHHHhhccc-cceecccCc-----------cchHHHH
Q 012185 374 FPLAITYSVPFAITAELTADSGGGQGLAIGVL----NLAIVIPQMIVSLGAG-PWDALFGGG-----------NIPAFVL 437 (469)
Q Consensus 374 i~~a~~~~vP~aLise~~p~~~~~~G~~~gi~----n~~i~l~Qil~s~~~g-~l~~~~g~~-----------~~~~f~~ 437 (469)
++ +.........+++.+|++ .+|+.+|+. |....+.|++.+.+.+ .+....|.. ...++.+
T Consensus 140 ig-g~~f~~~~~~vs~wfp~~--~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~ 216 (462)
T PRK15034 140 FA-GANFASSMGNISFFFPKA--KQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWI 216 (462)
T ss_pred HH-HHhHHHHHHHHHHHCCHh--HhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHH
Confidence 76 556666778899999876 678888888 7888888888765442 122222211 1123455
Q ss_pred HHHHHHHHHHHhhhcccCCC
Q 012185 438 ASLSALAGGVVATLKLPHLS 457 (469)
Q Consensus 438 ~~v~~liaai~~~~~vpet~ 457 (469)
.++..+++++..++..++.+
T Consensus 217 ~~~~~iv~~i~~~~~~~~~~ 236 (462)
T PRK15034 217 WVPLLAIATIAAWSGMNDIA 236 (462)
T ss_pred HHHHHHHHHHHHHHhCCCcc
Confidence 66666677766666666654
No 182
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.04 E-value=6.8e-05 Score=80.07 Aligned_cols=132 Identities=16% Similarity=0.143 Sum_probs=91.6
Q ss_pred HHHHhHHHhhhhc-----CchHHHH-HHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchh
Q 012185 304 VSSFLIEPMCRWI-----GSRLVWA-ISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLA 377 (469)
Q Consensus 304 i~s~i~~~l~~~i-----g~r~l~~-~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a 377 (469)
+..++.+++.||+ |||+.|+ .+++..+++...+++... ..+.+...+...+.|+..+
T Consensus 60 ~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~-----------------~~~l~~l~~~~~l~~~~~a 122 (491)
T PRK11010 60 VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEP-----------------GTQLRWLAALAVVIAFCSA 122 (491)
T ss_pred HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCC-----------------cchHHHHHHHHHHHHHHHH
Confidence 4677888999999 9999766 577777666655555421 0123334444555676666
Q ss_pred hhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhcccccee-cccCccchHHHHHHHHHHHHHHHhhhcccCC
Q 012185 378 ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDA-LFGGGNIPAFVLASLSALAGGVVATLKLPHL 456 (469)
Q Consensus 378 ~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~-~~g~~~~~~f~~~~v~~liaai~~~~~vpet 456 (469)
.....--+++.|..|++ ++|...|+......++.++.+...+.+.+ ..| ....|.+.++..++..+ ..+++||+
T Consensus 123 ~~~i~~~a~~~~~~~~~--~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~G--Wr~~f~i~a~l~ll~~l-~~~~~~e~ 197 (491)
T PRK11010 123 SQDIVFDAWKTDVLPAE--ERGAGAAISVLGYRLAMLVSGGLALWLADRYLG--WQGMYWLMAALLIPCII-ATLLAPEP 197 (491)
T ss_pred HHHHHHHHHHHHhcChh--hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC--HHHHHHHHHHHHHHHHH-HHHhcCCC
Confidence 55555558899999865 57888999999999999988877777665 233 34678887877777766 44457886
Q ss_pred C
Q 012185 457 S 457 (469)
Q Consensus 457 ~ 457 (469)
.
T Consensus 198 ~ 198 (491)
T PRK11010 198 T 198 (491)
T ss_pred c
Confidence 4
No 183
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.03 E-value=4.8e-05 Score=77.02 Aligned_cols=129 Identities=17% Similarity=0.132 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
+...++.+...+.+.+.+++.||+|||++..++.+..+++.+.. ... +.+..++...+.
T Consensus 39 ~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~--------------------~~~~l~~~~~~~ 97 (355)
T TIGR00896 39 LLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAP--------------------GTALLFAGTALI 97 (355)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hhc--------------------cHHHHHHHHHHH
Confidence 55566778888999999999999999999999887776655432 111 133445555566
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHH
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAG 445 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~lia 445 (469)
|++.+.....-.+++.|..|+ ++|+.+|+.+....+.+.+.+...+.+.+..+......|...++..+++
T Consensus 98 g~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~ 167 (355)
T TIGR00896 98 GVGIAIINVLLPSLIKRDFPQ---RVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLA 167 (355)
T ss_pred HHHHHHHhccchHHHHHhCcc---hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 777776555555677787764 4788899999999999988887777776544322234455555544443
No 184
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=97.96 E-value=3.6e-05 Score=82.56 Aligned_cols=137 Identities=19% Similarity=0.158 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
++..++-+-..+.+++.+.+.||+|||++++.+++++.++-..+++.. +....+++=.+.
T Consensus 122 ~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~--------------------~~~~~~~~Rfl~ 181 (521)
T KOG0255|consen 122 LGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAP--------------------NYWMFLIFRFLS 181 (521)
T ss_pred HHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhC--------------------cHHHHHHHHHHH
Confidence 444556667788889999999999999999999999988776666664 356677777788
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhc
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLK 452 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~ 452 (469)
|++.+....+.+.+++|+++++ .++..+.+ ....+..-.+.+...+.+.. +..+.+++.++.+++..++ +++
T Consensus 182 G~~~~~~~~~~~~~~~E~~~~~--~R~~~~~~-~~~~~~~~~~~~~~~a~~~~----~Wr~~~~~~~~~~~~~~~~-~~l 253 (521)
T KOG0255|consen 182 GFFGSGPLTVGFGLVAEIVSPK--QRGLALTL-GGFFFVGGLMLPAGAAYITR----DWRWLFWIISIPSGLFLLL-WFL 253 (521)
T ss_pred HhhccchhHHhHhhheeecCcc--hhhHHHHH-HHHHHHHHHHHHHHHHHHHh----hHHHHHHHHHHHHHHHHHH-HHc
Confidence 9999999999999999999987 55666777 44444444444444445543 3456677777777666653 555
Q ss_pred ccCCC
Q 012185 453 LPHLS 457 (469)
Q Consensus 453 vpet~ 457 (469)
+||.+
T Consensus 254 ~~Es~ 258 (521)
T KOG0255|consen 254 PPESP 258 (521)
T ss_pred cCcCh
Confidence 55653
No 185
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.96 E-value=0.00032 Score=74.65 Aligned_cols=202 Identities=13% Similarity=0.102 Sum_probs=122.7
Q ss_pred cccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHH
Q 012185 61 NTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLC 140 (469)
Q Consensus 61 n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~ 140 (469)
.....+.-+++.--..+++|+.-.++.....++|+++|-++.+.. .+..+- ..-..||++|++..++.++.
T Consensus 149 s~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~--~~~~~~-------~~~~gW~~~FiI~G~i~~~~ 219 (495)
T KOG2533|consen 149 SGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGV--FKLNGS-------GGLAGWRWLFIIEGVITLVL 219 (495)
T ss_pred cccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHh--hhhcCC-------CCcCCceeehhHHHHHHHHH
Confidence 334445778888889999999999999999999999988777541 111000 01247999999999998888
Q ss_pred hhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCCCCC
Q 012185 141 ALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFND 220 (469)
Q Consensus 141 ~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (469)
.++..+.+|+.|....-..+ +++ +...++.++..++. + .++
T Consensus 220 gi~~f~~lp~~P~~~~fl~~----------~ek---------------------------~~~~~~~~~~~~~~-~-~~~ 260 (495)
T KOG2533|consen 220 GIVVFFFLPDNPSKAWFLTD----------EEK---------------------------ELVVERLRESPSGG-I-ENK 260 (495)
T ss_pred HheEEEEecCChhhccccch----------HHH---------------------------HHHHHHHHhccCCC-c-ccc
Confidence 88889999998862210000 000 00000000000000 0 001
Q ss_pred CccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcee-ecCCCCCCChhhhhHHHHhHHHHHHHHHHH
Q 012185 221 GPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREV-YHGDPKGNDHEVKFYDQGVREGAFGLLLNS 299 (469)
Q Consensus 221 ~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~v-f~g~~~~~~~~~~~y~~gv~~G~~~l~i~~ 299 (469)
..+.++++.++ -+.++..++..|+++.--+++.+|.+-|+.+.. |.. . +.-.+ -+.+.
T Consensus 261 ---~~~~~~~~a~~--dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~-----------~-~a~~l----s~~~~ 319 (495)
T KOG2533|consen 261 ---FKWKGFKEALK--DPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSE-----------L-QANLL----STPYD 319 (495)
T ss_pred ---cCHHHHHHHHh--chhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcCh-----------H-Hhccc----cchHH
Confidence 23444444442 245788899999999988899999998887611 211 0 00011 12344
Q ss_pred HHHHHHHHhHHHhhhh----cCchHHHHHHHHHHHH
Q 012185 300 VVLGVSSFLIEPMCRW----IGSRLVWAISNFIVFA 331 (469)
Q Consensus 300 iv~~i~s~i~~~l~~~----ig~r~l~~~s~~~~ai 331 (469)
+..++..++.+.+.|| ..+|.++.....++++
T Consensus 320 ~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~ 355 (495)
T KOG2533|consen 320 VGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAI 355 (495)
T ss_pred hhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 5677888888999999 5566666665555544
No 186
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=97.95 E-value=8.5e-05 Score=76.09 Aligned_cols=136 Identities=15% Similarity=0.103 Sum_probs=102.2
Q ss_pred HHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccch
Q 012185 297 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPL 376 (469)
Q Consensus 297 i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~ 376 (469)
.+++...++=++.+.++||.+.|+...+|+++-+++++.+++..+ .....++..+.|..+
T Consensus 72 ~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s--------------------~~~~~~l~~lng~fQ 131 (448)
T COG2271 72 AFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPS--------------------LFLFAVLWVLNGWFQ 131 (448)
T ss_pred HHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhH--------------------HHHHHHHHHHHHHHh
Confidence 466777888899999999999999999999999999988887763 334444555545444
Q ss_pred hhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhcc--ccceecccCccchHHHHHHHHHHHHHHHhhhccc
Q 012185 377 AITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGA--GPWDALFGGGNIPAFVLASLSALAGGVVATLKLP 454 (469)
Q Consensus 377 a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~--g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vp 454 (469)
+.--.--..++++..|.+ .+|+..++.|++..+.-.+++.+. +.+.... +....|++.|+++++-+++++++.+
T Consensus 132 g~Gwpp~~~~i~~Wfsr~--eRG~~~siWn~shNiGGal~~~~~~la~~~~~~--~w~~~f~~pgiiaiival~~~~~~r 207 (448)
T COG2271 132 GMGWPPCARTITHWFSRK--ERGTWWSIWNTSHNIGGALAPLVALLAFFAFHG--GWRAAFYFPGIIAIIVALILLFLLR 207 (448)
T ss_pred cCCCcHHHHHHHHHcCcc--ccCceEEEehhhhhcccchHHHHHHHHHHHhcc--chhHHHHHHHHHHHHHHHHHHHHhC
Confidence 422222234889999987 678999999999999888887766 5554333 2457799999999999998887766
Q ss_pred CC
Q 012185 455 HL 456 (469)
Q Consensus 455 et 456 (469)
+|
T Consensus 208 d~ 209 (448)
T COG2271 208 DR 209 (448)
T ss_pred CC
Confidence 43
No 187
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.94 E-value=4.7e-05 Score=76.85 Aligned_cols=169 Identities=21% Similarity=0.175 Sum_probs=110.2
Q ss_pred HHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHH
Q 012185 253 SWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFAC 332 (469)
Q Consensus 253 g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~ 332 (469)
..+++.++.-+++.+. +++|.. +.-.| .| -.| -.+++..+++|...+.++||+|||.+..++.+..+++
T Consensus 43 ~L~~~~~~~V~~F~~a--~~~~~~---~~~~y-aG-flG----SsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s 111 (451)
T KOG2615|consen 43 SLYPFVVFMVRDFNIA--IGEPDG---ASVFY-AG-FLG----SSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALS 111 (451)
T ss_pred chhHHHHHhhHHHHHh--hCCccc---ccchh-hh-hHh----hHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHH
Confidence 3567777777776553 344321 11122 11 122 3467889999999999999999999999888777776
Q ss_pred HHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHH-HHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHH
Q 012185 333 MATTAIISVISVREYSGGIEHGIGANQAIKVASLVV-FTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVI 411 (469)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l 411 (469)
++.-+... |. +++++ =.+.|+.-+ ...+--|+++|..+++ .++..|+..+++..+
T Consensus 112 ~ll~~~S~--------------------~F-~afv~aR~l~Gi~kg-nl~v~rAiisdV~sek--~r~l~ms~v~~a~~l 167 (451)
T KOG2615|consen 112 YLLWALSR--------------------NF-AAFVLARFLGGIFKG-NLSVIRAIISDVVSEK--YRPLGMSLVGTAFGL 167 (451)
T ss_pred HHHHHHHH--------------------HH-HHHHHHHHhhhhccC-chHHHHHHHHhhcChh--hccceeeeeehhhhc
Confidence 55444332 23 34444 345677666 6677789999999987 556669999999999
Q ss_pred HHHHHhhcccccee---cccCccchHH--HHHHHHHHHHHHHhhhcccCCC
Q 012185 412 PQMIVSLGAGPWDA---LFGGGNIPAF--VLASLSALAGGVVATLKLPHLS 457 (469)
Q Consensus 412 ~Qil~s~~~g~l~~---~~g~~~~~~f--~~~~v~~liaai~~~~~vpet~ 457 (469)
.=++-+.+.|.+.. ..|... .++ ++..+++...-++..++.|||-
T Consensus 168 GfilGPmIGgyla~f~~~~g~~p-~alP~~~v~i~a~~~v~~~~~~lpETL 217 (451)
T KOG2615|consen 168 GFILGPMIGGYLAQFSSISGSYP-FALPCLLVFILAAGDVTFFPWFLPETL 217 (451)
T ss_pred chhhcchhhhHHHhhHhhhccCc-hHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 98888888887755 455432 211 1122222222445668899983
No 188
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=97.91 E-value=0.00029 Score=73.46 Aligned_cols=113 Identities=8% Similarity=-0.145 Sum_probs=82.6
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
+....+.+...+.+.+.+++.||+|||++..++.++++++.+........ + +.+..++...+.
T Consensus 42 ~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~--~---------------~~~~~l~~~~l~ 104 (410)
T TIGR00885 42 LVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEI--M---------------NYTLFLVGLFIL 104 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhh--c---------------cHHHHHHHHHHH
Confidence 45556777889999999999999999999999999988876554322210 0 244455556667
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccce
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWD 424 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~ 424 (469)
|++.+.....--+.+.+..|++ .++..+++.+....+...+.+.+.+.+.
T Consensus 105 G~g~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~lG~~~g~~i~~~l~ 154 (410)
T TIGR00885 105 TAGLGFLETAANPYILVMGPES--TATRRLNLAQSFNPFGSIIGMVVAQQLI 154 (410)
T ss_pred HhhHHHHHhhhhHHHHHHCCHh--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888877665445667777665 5677899999999999888887776654
No 189
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=97.86 E-value=0.0018 Score=66.16 Aligned_cols=57 Identities=19% Similarity=0.304 Sum_probs=48.0
Q ss_pred HHHHHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhcccccc
Q 012185 49 FVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASG 105 (469)
Q Consensus 49 ~v~g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~ 105 (469)
+..+++++-.++..+|.....|+.++-|++...+=.++.+.+.++|+++|.++|+.+
T Consensus 107 FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~l 163 (422)
T COG0738 107 FLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSL 163 (422)
T ss_pred HHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 444677778888888888889999999998888888888899999999999998754
No 190
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.85 E-value=0.00088 Score=70.82 Aligned_cols=257 Identities=18% Similarity=0.193 Sum_probs=152.8
Q ss_pred cccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHH
Q 012185 61 NTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLC 140 (469)
Q Consensus 61 n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~ 140 (469)
-++.+-.-||++|++..|.|....++.+-..+.|..++..++.. +.+.. ..-.+|.++++..++.
T Consensus 127 ~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~--~~~~~-------------~~a~~f~ia~~~~~~~ 191 (463)
T KOG2816|consen 127 SAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGY--LVKFL-------------GIALVFLIAAASGILS 191 (463)
T ss_pred hhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHH--HHHhc-------------CchHHHHHHHHHHHHH
Confidence 45566788999999999999999999999889999999988875 33322 2346788999999999
Q ss_pred hhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCCCCC
Q 012185 141 ALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFND 220 (469)
Q Consensus 141 ~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (469)
.....+++||+-..+++.+. ....+.. ++
T Consensus 192 ~~y~~~~l~Esl~~~~~~~~---~~~~~~~----------------------------------------~~-------- 220 (463)
T KOG2816|consen 192 LLYMLLFLPESLQEKERSDA---TLRELTP----------------------------------------GS-------- 220 (463)
T ss_pred HHHHhhccccccCccccccc---cccccCC----------------------------------------Cc--------
Confidence 99999999997543332210 0000000 00
Q ss_pred CccchHHHHHHHhcc--CCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhce----eecCCCCC-CChhhhhHHHHhHHHHH
Q 012185 221 GPGAVLVNLLTSLRH--LPPAMHVVLIVMALTWLSWFPFFLFDTDWMGRE----VYHGDPKG-NDHEVKFYDQGVREGAF 293 (469)
Q Consensus 221 ~~~~~~~~l~~~~~~--mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~----vf~g~~~~-~~~~~~~y~~gv~~G~~ 293 (469)
.......+.+++.+. --|....+|++.++ .|.+++-++. .|-.-+-. ++++ .+ .
T Consensus 221 ~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~---------~~~~~~~~~~~~~~~yl~~~f~w~~~~---------~s-~ 281 (463)
T KOG2816|consen 221 LDSSHVADAFQSLTKVGPDRLLLLLLLVAFL---------SSLPEAGGASDVLLLYLKAKFGWNKKE---------FS-D 281 (463)
T ss_pred ccchhhhhhhhhhcccCCCccchHHHHHHHH---------HHHHHhcCceeEEEEEEeeecCcCHHH---------HH-H
Confidence 000011112222211 11122233444333 2333433222 11100000 1111 12 1
Q ss_pred HHHHHHHHHHHHHHh-HHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 294 GLLLNSVVLGVSSFL-IEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 294 ~l~i~~iv~~i~s~i-~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
-....++...+..++ ++.+.+.+|.|++...|.+...++++..++.+. .|..+...+..++.
T Consensus 282 ~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~-----------------~w~~~~~~v~~~~~ 344 (463)
T KOG2816|consen 282 LLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATE-----------------TWMMFAAGVVVALA 344 (463)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhcc-----------------chhhhHHHHHHHhh
Confidence 112233455555544 457888889999777898888888877777652 12345555566656
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhcccccee
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDA 425 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~ 425 (469)
++......+ .++.+...+ .+|+.+++......+.+++.+...+.+..
T Consensus 345 ~~~~pa~~s----~~s~~v~~~--e~g~v~~~is~i~~l~~~~~~~~~~~i~~ 391 (463)
T KOG2816|consen 345 GIVFPAIRA----FASILVSPE--EQGKVFGIISGIEGLSGVVSPALYGNIFA 391 (463)
T ss_pred cchhHHHHh----HHHhhcccc--cccchhhHHHHHHHHhhhhhHHHHHHHHH
Confidence 665554444 566666654 68999999999999999999988887653
No 191
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.80 E-value=0.00055 Score=69.71 Aligned_cols=266 Identities=16% Similarity=0.190 Sum_probs=147.0
Q ss_pred cccccchhHHHHHhcCCCccc-hhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHH
Q 012185 59 ANNTVQGPARALLADLSGPDQ-RNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFL 137 (469)
Q Consensus 59 a~n~~~~p~rAli~D~~p~~q-r~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~ 137 (469)
+.-......-|.++|..|+|. |+++.++.--+.++|-++|+..|++. .+.. ..+.-|++.+++.
T Consensus 172 gsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGil--Ye~~-------------Gk~aPFlVL~~v~ 236 (464)
T KOG3764|consen 172 GSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGIL--YEFA-------------GKSAPFLVLAIVL 236 (464)
T ss_pred hHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccch--Hhhc-------------CCcCcHHHHHHHH
Confidence 333445567889999999865 79999999999999999999999973 2222 2345677877777
Q ss_pred HHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCC
Q 012185 138 TLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGS 217 (469)
Q Consensus 138 ~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (469)
++-..+.++.++.....+ +. .
T Consensus 237 Lld~~L~l~vi~p~~~~~-~~-~--------------------------------------------------------- 257 (464)
T KOG3764|consen 237 LLDGALQLLVIEPTEMDP-DS-T--------------------------------------------------------- 257 (464)
T ss_pred HHHHHHHHheeCccccCc-cc-c---------------------------------------------------------
Confidence 777666655553211100 00 0
Q ss_pred CCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhh---hhhhhceeecCCCCCCChhhhhHHHHhHHHHHH
Q 012185 218 FNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFD---TDWMGREVYHGDPKGNDHEVKFYDQGVREGAFG 294 (469)
Q Consensus 218 ~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~---t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~ 294 (469)
.+...++++++. |.-. +..+--|++-.++.+-- +.||-|... .| ..+.|+ +
T Consensus 258 ---~~~~~~~~Ll~d----P~I~----~~agai~~~n~~lafLePtlslwm~e~m~--~p--------~w~~G~-----~ 311 (464)
T KOG3764|consen 258 ---EQGTPMWSLLMD----PYIL----LIAGAITFSNSSLAFLEPTLSLWMLETMF--TP--------GWEVGL-----A 311 (464)
T ss_pred ---ccCccHHHHHhC----chHh----hhhcchhhccchHHHhCcccHHHHHHhcc--CC--------Ccceee-----e
Confidence 011123333332 2211 11111122212222211 245555443 11 123333 2
Q ss_pred HHHHHHHHHHHHHhHHHhhhhcCchHHHHH---HHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHH
Q 012185 295 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAI---SNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTL 371 (469)
Q Consensus 295 l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~---s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (469)
.+-.++..++.+-+.+.+.||++.-+ |.. +.+..+++...+.+.+. +...++....
T Consensus 312 fLp~~~~y~ig~~lfg~la~k~~~~~-wl~~~~gl~~~G~~~~~iP~~~~--------------------~~~L~vp~~~ 370 (464)
T KOG3764|consen 312 FLPASLSYAIGTNLFGKLADKYPHLR-WLLSLGGLATVGVSSGPIPFATS--------------------IAQLWVPNFG 370 (464)
T ss_pred ecccccchhccCchHHHHHHhcCchh-HHHHHHHHHHHHHHhchhHhhhh--------------------HHHHhhhhHH
Confidence 23345666777788899999998433 433 44444433333333331 2223322222
Q ss_pred hccchhhhcc--cc--chhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHH
Q 012185 372 LGFPLAITYS--VP--FAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGV 447 (469)
Q Consensus 372 ~Gi~~a~~~~--vP--~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai 447 (469)
.|++-+...+ +| ..++-+.|.+..+..|...++...+.+++-.+.+.+.|.+.+..|-. |....-++.+++-+-
T Consensus 371 l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~--wl~~iig~~n~iyap 448 (464)
T KOG3764|consen 371 LGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFE--WLMTIIGILNLIYAP 448 (464)
T ss_pred HHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHH--HHHHHHHHHHHHHHH
Confidence 2222222222 11 12333334433346899999999999999999999999999998854 565666666666664
No 192
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.78 E-value=0.00053 Score=72.10 Aligned_cols=271 Identities=13% Similarity=0.103 Sum_probs=135.4
Q ss_pred hHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHHhhhee
Q 012185 66 PARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTI 145 (469)
Q Consensus 66 p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~~~it~ 145 (469)
+...|+....|+++|+++.++......+|.+++..++... . .++| ..++.+..|+....++++++.+
T Consensus 134 A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll--~-s~gW----------r~y~~Ln~Isl~s~~~a~~~a~ 200 (511)
T TIGR00806 134 AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL--V-TLGW----------ISYSTLNIISLVFMTFSVFLAL 200 (511)
T ss_pred HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--H-hcCc----------hhHHHHHHHHHHHHHHHHHHHH
Confidence 5778899999999999999999999999999988777531 1 1111 1455667777777666666554
Q ss_pred EEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhhhhhccccccCCCCCCCccch
Q 012185 146 YFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLKHISKKAEDTNGSFNDGPGAV 225 (469)
Q Consensus 146 ~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (469)
+.|-++...-..++ ++.+ +... .+ .++..+.+. .+ +. +..+......
T Consensus 201 -~LP~~~~sl~f~~~-~~~~----~~~~---~~---------------~~~~~~~~~-~~------~~--~~~~~~~~~~ 247 (511)
T TIGR00806 201 -FLKRPKRSLFFNRL-EDVR----GALP---CE---------------LDQMVPGPG-GK------LE--DYLGTCRDSF 247 (511)
T ss_pred -hCCCCchhhhhccc-cccc----cccc---cc---------------cccCCCCCc-cc------cc--hhhhhhhhHH
Confidence 56632221111110 0000 0000 00 000000000 00 00 0000001123
Q ss_pred HHHHHHHhc---cCCHHH-HHHHHHHHHHHHHHHHHhhhhhhhhhceeecC-CCCCCChhhhhHHHHhHHHHHHHHHHHH
Q 012185 226 LVNLLTSLR---HLPPAM-HVVLIVMALTWLSWFPFFLFDTDWMGREVYHG-DPKGNDHEVKFYDQGVREGAFGLLLNSV 300 (469)
Q Consensus 226 ~~~l~~~~~---~mP~~l-~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g-~~~~~~~~~~~y~~gv~~G~~~l~i~~i 300 (469)
++.+++.++ +-|+-+ |-+|. -++-.|++-+..|.-. +++. +|+ + +.||-++.. +..+
T Consensus 248 ~~~l~~~~~~~y~n~~vl~WSlWw--a~a~~g~~qv~~Y~Q~-----LW~~v~~~---~--~~yNG~veA------~~tl 309 (511)
T TIGR00806 248 LVRMLSELVTIYRNPQLLLWSLWW--VFNSAGYYLITYYVHT-----LWGTLDES---L--NKYNGAVDA------ASTL 309 (511)
T ss_pred HHHHHHHHHHHhcCcchhhhhHHH--HHHhhHHHHHHHHHHH-----HHHHcCCC---c--cccCCHHHH------HHHH
Confidence 333433222 112222 22333 2233344444444432 3322 221 1 116655542 2334
Q ss_pred HHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhc
Q 012185 301 VLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITY 380 (469)
Q Consensus 301 v~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~ 380 (469)
.+++.++..+.+-.+..+--.+.+ .++++...+..++...- + +.+...+...+++..+..+.
T Consensus 310 lga~~a~~ag~~~~~w~~~~~l~l--~v~s~~~~gll~~m~~t-~---------------~Iw~~Y~~yvlf~~~y~fli 371 (511)
T TIGR00806 310 LGAITSFIAGFVNIRWARWSKLLI--AVVSAIQAGLVFWMSQS-H---------------DIWVLYVTYVLFRGIYQFLV 371 (511)
T ss_pred HHHHHHHHHHhhcCCchhhHHHHH--HHHHHHHHHHhhhhhcc-c---------------chHHHHHHHHHHHHHHHHHH
Confidence 566677777777333322112222 22222222222222111 1 47888888889999999888
Q ss_pred cccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhcc
Q 012185 381 SVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGA 420 (469)
Q Consensus 381 ~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~ 420 (469)
++--+-++..+.++ ..|+-.|+=+..-.+=|.+..++.
T Consensus 372 tia~~~iA~~L~~~--~~aLvFGiNtfvAl~LQtilT~iV 409 (511)
T TIGR00806 372 PIATFQIASSLSKE--LCALVFGINTFVATALKTIITAVV 409 (511)
T ss_pred HHHHHHHHHHhccc--ceEEEEecHHHHHHHHHHheEEEE
Confidence 88666677666654 789999998877777777766433
No 193
>PRK10133 L-fucose transporter; Provisional
Probab=97.77 E-value=0.00063 Score=71.53 Aligned_cols=111 Identities=7% Similarity=-0.112 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
+.+..+.+...+.+.+.+++.||+|||++...+.++++++.+....... . + +....++...+.
T Consensus 65 l~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~-a-~---------------~~~~ll~~r~l~ 127 (438)
T PRK10133 65 LIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAE-I-M---------------NYTLFLVGLFII 127 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHh-c-C---------------CHHHHHHHHHHH
Confidence 4455677888999999999999999999999999999887754321110 0 1 245566677778
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhcccc
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGP 422 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~ 422 (469)
|++.+.......+++.+..|++ .++..+++.+....+...+.++..+.
T Consensus 128 G~g~g~~~~~~~~~v~~~~~~~--~~~~~~s~~~~~~~~G~~~g~~~g~~ 175 (438)
T PRK10133 128 AAGLGCLETAANPFVTVLGPES--SGHFRLNLAQTFNSFGAIIAVVFGQS 175 (438)
T ss_pred HHHHHHHHhhHHHHHHHhCChh--hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888888778888765443 33345888888888888887766544
No 194
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=97.77 E-value=0.0002 Score=74.11 Aligned_cols=135 Identities=19% Similarity=0.093 Sum_probs=89.4
Q ss_pred HHHHHhHHHhhhhc-----CchHH-HHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccch
Q 012185 303 GVSSFLIEPMCRWI-----GSRLV-WAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPL 376 (469)
Q Consensus 303 ~i~s~i~~~l~~~i-----g~r~l-~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~ 376 (469)
.+...+.++++||+ ||||. ..++.++.++++..+++... + .+.+..+++..+.+...
T Consensus 46 ~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~---~--------------~~~~~l~~~~~~~~~~~ 108 (402)
T PRK11902 46 YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPP---H--------------AALWPLAGLAVLVAFLS 108 (402)
T ss_pred HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCc---c--------------chHHHHHHHHHHHHHHH
Confidence 45667788999999 78764 55678888877776655421 0 02333333434445555
Q ss_pred hhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccCC
Q 012185 377 AITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL 456 (469)
Q Consensus 377 a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpet 456 (469)
+.....--+++.|..|++ ++|...++......+++++.+.+.+.+.+...+ ....|++.++..++..+ ..+.+||+
T Consensus 109 ~~~~~~~~al~~~~~~~~--~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~g-w~~~f~i~a~~~l~~~l-~~~~~~e~ 184 (402)
T PRK11902 109 ASQDIVFDAYSTDVLHPE--ERGAGAAVKVLGYRLAMLVSGGLALWLADRVLG-WGNTYLLMAGLMLAGAL-TTLWAPEP 184 (402)
T ss_pred HHHHHHHHHHHHHhcChh--hhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccC-HHHHHHHHHHHHHHHHH-HHHhcCCC
Confidence 544444457889998876 578889999998889998888777666553321 34678777777766655 45667876
Q ss_pred CC
Q 012185 457 SS 458 (469)
Q Consensus 457 ~g 458 (469)
+.
T Consensus 185 ~~ 186 (402)
T PRK11902 185 EV 186 (402)
T ss_pred cc
Confidence 43
No 195
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.75 E-value=0.00033 Score=73.77 Aligned_cols=102 Identities=18% Similarity=0.160 Sum_probs=63.8
Q ss_pred HHHHHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhh----cccc
Q 012185 49 FVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACC----AACG 124 (469)
Q Consensus 49 ~v~g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~----~~~~ 124 (469)
..++=.+.+++. ...+..|+|++|..-++||.|+.+..+.-..+|.++|..++... ..++..... ..=+
T Consensus 133 mL~~R~l~Gvg~-~n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f------~~Lg~~G~~i~~~~~~n 205 (488)
T KOG2325|consen 133 MLVARILTGVGV-GNFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAF------TPLGEKGFMILPGLIFN 205 (488)
T ss_pred HHHHHHHcCcCc-ccHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHH------hhhcCCceEEcCcceEE
Confidence 334455555542 45678999999999999999999998777777777777666431 111100000 0012
Q ss_pred hhHHHHHHHHHHHHHHhhheeEEeeccCCCCCC
Q 012185 125 NLKAAFLVAVVFLTLCALVTIYFADEVPLTVNQ 157 (469)
Q Consensus 125 ~~~~~f~i~~i~~~i~~~it~~~v~E~p~~~~~ 157 (469)
+....-++.++.-++..++..++.+|.++...+
T Consensus 206 ~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~ 238 (488)
T KOG2325|consen 206 MYTAPAWLMAILWIIYIVIILFFFKEVYRGIID 238 (488)
T ss_pred ecchHHHHHHHHHHHHHHHHHhheeecccCccc
Confidence 344445566666666667778889998765443
No 196
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=97.74 E-value=0.00015 Score=75.38 Aligned_cols=149 Identities=12% Similarity=0.192 Sum_probs=94.2
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhh----cCchHHHH-HHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHH
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRW----IGSRLVWA-ISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLV 367 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~----ig~r~l~~-~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (469)
+.+.+..+..++...+.+.++|| +||||.|+ .+.+.++++++.+...... + ........++
T Consensus 39 ~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~-------------~-~~~~~~~~~~ 104 (437)
T TIGR00792 39 TLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDF-------------S-ATGKLVYAYI 104 (437)
T ss_pred HHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCC-------------C-cchHHHHHHH
Confidence 45556677788888899999997 67867666 5777777665544433210 0 0001223344
Q ss_pred HHHHhccchhhhccccc-hhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccC-----ccchHHHHHHHH
Q 012185 368 VFTLLGFPLAITYSVPF-AITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGG-----GNIPAFVLASLS 441 (469)
Q Consensus 368 ~~~~~Gi~~a~~~~vP~-aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~-----~~~~~f~~~~v~ 441 (469)
...+++++++. ..+|+ ++.+|..+++ ++++...+..+....++.++.+...+++....++ .....+.+.++.
T Consensus 105 ~~~~~~~~~~~-~~~~~~al~~~~~~~~-~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l 182 (437)
T TIGR00792 105 TYILLGLFYSF-VNIPYWSLVPAITLDP-RERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALI 182 (437)
T ss_pred HHHHHHHHHHh-hcccHhhCcccccCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHH
Confidence 44556777774 45664 6777776543 3567778888888888888887766666543331 123456667777
Q ss_pred HHHHHHHhhhcccCCC
Q 012185 442 ALAGGVVATLKLPHLS 457 (469)
Q Consensus 442 ~liaai~~~~~vpet~ 457 (469)
+++.++.+++.+||.+
T Consensus 183 ~~~~~~~~~~~~~e~~ 198 (437)
T TIGR00792 183 GVVSLIICFFGTKERY 198 (437)
T ss_pred HHHHHHHHHcCCEecC
Confidence 7777766677788765
No 197
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=97.70 E-value=0.00048 Score=73.90 Aligned_cols=140 Identities=15% Similarity=0.064 Sum_probs=104.2
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
|-...+++.+.+.+++.+++.|++|||+.+.++.+.+.++-+..++.. +....++.=.+.
T Consensus 93 ~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~--------------------~~~~l~~GR~l~ 152 (513)
T KOG0254|consen 93 LLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAP--------------------SWYQLIVGRILT 152 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhh--------------------hHHHHHHHHHHh
Confidence 555567788899999999999999999999999999988777666664 366677777778
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhc
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLK 452 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~ 452 (469)
|++.+....+-=-.++|.-|.+ .||...++.++++.+.+++. .+.+.............+.++.+.+++-++. .++
T Consensus 153 G~g~G~~~~~~piy~sEiap~~--~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~ 228 (513)
T KOG0254|consen 153 GLGVGGASVLAPVYISEIAPAH--IRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG-MLF 228 (513)
T ss_pred ccchhhhhhcchhhHhhcCChh--hhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHh
Confidence 8888877766556778888875 78999999999999888776 3333333221011234577777777777775 778
Q ss_pred ccCC
Q 012185 453 LPHL 456 (469)
Q Consensus 453 vpet 456 (469)
+||+
T Consensus 229 ~pes 232 (513)
T KOG0254|consen 229 LPES 232 (513)
T ss_pred CCCC
Confidence 8865
No 198
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=97.68 E-value=0.00075 Score=65.84 Aligned_cols=183 Identities=19% Similarity=0.255 Sum_probs=108.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhc
Q 012185 237 PPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWI 316 (469)
Q Consensus 237 P~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~i 316 (469)
-+++|.+.+..++-..+|+||..-.+.++.+ -|+-.+.. .|..--.+|. ++++.|-+.+.++||.
T Consensus 263 ~ppfw~~~iicv~yyva~fPFi~lg~~fF~~-rfGlS~~~-------------a~~i~s~vy~-Isav~spvfg~i~Dk~ 327 (459)
T KOG4686|consen 263 YPPFWVLVIICVLYYVAWFPFITLGPMFFQK-RFGLSAVS-------------AGNILSTVYG-ISAVLSPVFGAISDKY 327 (459)
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhhHHHHHH-hhCCChhh-------------ccchhhhhhh-hhhhhhhhHHHhHhhh
Confidence 4567877777777777899998887777665 35433211 1111122333 4556677788999999
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCC
Q 012185 317 GSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGG 396 (469)
Q Consensus 317 g~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~ 396 (469)
|++..|+.+..+..+.--...+.+. ++++... .++|.++...----|.+++..+|++
T Consensus 328 G~n~~wv~~a~~~tl~~H~~l~Ft~------------------lsPy~~m---~~lGLsysllAcslWP~va~~vpE~-- 384 (459)
T KOG4686|consen 328 GFNLWWVASACILTLLGHSGLFFTF------------------LSPYTSM---TFLGLSYSLLACSLWPCVASLVPEE-- 384 (459)
T ss_pred cceehhHHHHHHHHHHHhhhHHhhh------------------ccHHHHH---HHHhhhHHHHHHHHhhhhhhhCCHH--
Confidence 9999999865554432222222221 1344443 4455555433322345888888876
Q ss_pred CccchhhHHHHHHHHHHHHHhhccccceecccCcc-chH-HHHHHHHHHHHHHHhhhcccCCC
Q 012185 397 GQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGN-IPA-FVLASLSALAGGVVATLKLPHLS 457 (469)
Q Consensus 397 ~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~-~~~-f~~~~v~~liaai~~~~~vpet~ 457 (469)
..|+..|...+...++-.+++.+.|.+.+.-|++. .-+ |..-+.+++++....+..=++.+
T Consensus 385 qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~N~kq~ 447 (459)
T KOG4686|consen 385 QLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYLNKKQS 447 (459)
T ss_pred HhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhheecccc
Confidence 57777777777777777777888888888766432 222 44445556666553333333333
No 199
>PTZ00207 hypothetical protein; Provisional
Probab=97.65 E-value=0.00062 Score=73.97 Aligned_cols=134 Identities=11% Similarity=0.033 Sum_probs=92.0
Q ss_pred HHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhcccc
Q 012185 304 VSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVP 383 (469)
Q Consensus 304 i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP 383 (469)
+..++.+++.||+|+|+++.++.++++++.+.+++... . .+ . .+.+...+...+.|++.+......
T Consensus 76 ~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~---~----~i----~---~s~~~l~l~r~l~G~G~~~~~~~~ 141 (591)
T PTZ00207 76 YFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQ---E----VI----E---GSVVRLSVYNGLMTLGCMLFDLGA 141 (591)
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhc---c----cc----c---CcHHHHHHHHHHHHHHHHHHHHHH
Confidence 35567899999999999999999999998887776521 0 00 0 025556666667888877776666
Q ss_pred chhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccCCC
Q 012185 384 FAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLS 457 (469)
Q Consensus 384 ~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpet~ 457 (469)
...+.+.+|+ .+|..+|+.+.+..+...+.+.....+.. .+ ....|++-++..++.++..+.+++...
T Consensus 142 ~~~i~~~Fp~---~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~--~~~~fl~l~vl~~vv~ll~~~~vr~p~ 209 (591)
T PTZ00207 142 VVTVLSVFPS---NRGAVVAIMKTFTGLGSAILGSIQLAFFS-DN--TSAYFFFLMSFALVVGILAIVFMRLPP 209 (591)
T ss_pred HHHHHHhChh---hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh--HHHHHHHHHHHHHHHHHHHHhheeCCc
Confidence 7788888885 46999999999999998765544443332 11 224566666666666665666655543
No 200
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=97.62 E-value=0.00072 Score=70.62 Aligned_cols=172 Identities=14% Similarity=0.136 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCc-
Q 012185 240 MHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGS- 318 (469)
Q Consensus 240 l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~- 318 (469)
-.++|...|+.|.+|-.+.-|.+.|+.|+ .+-+ ....| +.+.++.+...+.+.+.+++.||+|+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~g~s-------------~~~iG-l~~a~~~~~~~i~~~~~g~l~dr~g~~ 68 (418)
T TIGR00889 4 TAKLKFMSFLQWFIWGSWLVTLGSYMSKT-LHFS-------------GAEIG-WVYSSTGIAAILMPILVGIIADKWLSA 68 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCC-------------HHHHH-HHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 34678888888777777777777777663 2221 11234 44456778889999999999999965
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhcccc------
Q 012185 319 RLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTA------ 392 (469)
Q Consensus 319 r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p------ 392 (469)
|++..++.++.+++.....+.. +.+..+++..+.|+.+++...+--++...+..
T Consensus 69 r~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~ 128 (418)
T TIGR00889 69 QKVYAVCHFAGALLLFFAAQVT--------------------TPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDV 128 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc--------------------CHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCc
Confidence 7677777776665554444332 12233334444565554333222222211111
Q ss_pred CCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccCC
Q 012185 393 DSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL 456 (469)
Q Consensus 393 ~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpet 456 (469)
....++.+.+|. +...+.+++.|.+ .. ... ...|++.++..++..++ .+.+||+
T Consensus 129 ~~~~~~~r~~G~------lG~~ig~~l~g~l-~~-~~~-~~~f~~~~~~~~~~~~~-~~~~~e~ 182 (418)
T TIGR00889 129 VTDFPPIRVMGT------IGFIAAMWAVSLL-DI-ELS-NIQLYITAGSSALLGVF-ALTLPDI 182 (418)
T ss_pred hhcCCCeeeehh------HHHHHHHHHHHHh-cc-cch-hHHHHHHHHHHHHHHHH-HhcCCCC
Confidence 000122333442 3455555555544 11 111 23466777777776664 5577876
No 201
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=97.57 E-value=0.00044 Score=72.38 Aligned_cols=180 Identities=14% Similarity=0.170 Sum_probs=118.9
Q ss_pred CCHHHHHHHHHHH---HHHHHHHHHhhhhhhh-hhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHH
Q 012185 236 LPPAMHVVLIVMA---LTWLSWFPFFLFDTDW-MGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEP 311 (469)
Q Consensus 236 mP~~l~~l~~~~f---~~w~g~~~~~~y~t~~-vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~ 311 (469)
-|+.+..+..+++ |+..|.-..+.|+.++ +++. . .+++....+..+ .|+....++.++.++
T Consensus 19 ~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~g-L------------g~~~~~A~~l~~--~y~slVY~t~i~GG~ 83 (498)
T COG3104 19 QPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDG-L------------GFDETHATGLFS--AYGSLVYLTPIIGGW 83 (498)
T ss_pred CCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhcccc-C------------CcChHhhHHHHH--HHHHHHHHHHHHHHH
Confidence 5888998888888 4556665555555432 1111 0 112222112111 233344557888999
Q ss_pred hhhhc-CchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhcc
Q 012185 312 MCRWI-GSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAEL 390 (469)
Q Consensus 312 l~~~i-g~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~ 390 (469)
+.||+ |+|+..+.|.++++++.+.++..... ......+..++.+++.|-+=.-+-.+++|.
T Consensus 84 laDr~LG~~~tI~lGail~~iGh~~L~~~~~~------------------~~~gl~i~L~~I~iG~Gl~K~NiS~llg~l 145 (498)
T COG3104 84 LADRVLGTRRTIVLGAILMAIGHLVLAISSVS------------------GPGGLYIGLALIIVGTGLFKPNISSLLGEL 145 (498)
T ss_pred HHHHhcchhHHHHHHHHHHHHHHHHHhccccc------------------cccHHHHHHHHHHhccccccccHHHHHHHh
Confidence 99996 99999999999999888765544200 133455666667788888888999999999
Q ss_pred ccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhh
Q 012185 391 TADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVAT 450 (469)
Q Consensus 391 ~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~ 450 (469)
+|+.+.++-...+++.+.+.+.-++.+.+.+.+-+..| ....|..+++-..++.+..+
T Consensus 146 y~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g--~~~gF~~aavGm~~gl~~f~ 203 (498)
T COG3104 146 YPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYG--WHVGFGLAAVGMIIGLVIFL 203 (498)
T ss_pred cCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHH
Confidence 99765334444777777777887888888877766665 23568888887777766433
No 202
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=97.54 E-value=0.0013 Score=69.29 Aligned_cols=132 Identities=8% Similarity=-0.070 Sum_probs=98.1
Q ss_pred HHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchh
Q 012185 298 NSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLA 377 (469)
Q Consensus 298 ~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a 377 (469)
+.....+.-++.+.+.||+|-|+++.++.+..++..+.+++..+ .....++=.++|++-|
T Consensus 71 F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~S--------------------l~~L~i~R~llGvaEA 130 (511)
T TIGR00806 71 LPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTS--------------------VWHMQLMEVFYSVTMA 130 (511)
T ss_pred HHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH--------------------HHHHHHHHHHHHHHHH
Confidence 34566777888999999999999999999998888888877652 5567777888999999
Q ss_pred hhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCcc-chHHHHHHHHHHHHHHHhhhccc
Q 012185 378 ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGN-IPAFVLASLSALAGGVVATLKLP 454 (469)
Q Consensus 378 ~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~-~~~f~~~~v~~liaai~~~~~vp 454 (469)
... .=+..+...+|++ .+|+..|+.|.+..++.++++++.+.+. .+|-.. ....+++-....++.+ ..+++|
T Consensus 131 ~~~-A~~syI~~WfP~k--ER~ratsi~~sg~~vG~~Ia~~L~qll~-s~gWr~y~~Ln~Isl~s~~~a~~-~a~~LP 203 (511)
T TIGR00806 131 ARI-AYSSYIFSLVPPS--RYQRAAAYSRAAVLLGVFLSSVLGQLLV-TLGWISYSTLNIISLVFMTFSVF-LALFLK 203 (511)
T ss_pred HHH-HHHHHHHHHCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCchhHHHHHHHHHHHHHHHHH-HHHhCC
Confidence 887 7788999999986 6788899999999999999998888733 344111 1223333333333333 445556
No 203
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=97.52 E-value=0.014 Score=58.99 Aligned_cols=264 Identities=11% Similarity=0.086 Sum_probs=148.0
Q ss_pred hhHHHHHHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccch
Q 012185 46 AFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGN 125 (469)
Q Consensus 46 i~~~v~g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~ 125 (469)
......|-.+...++...++-.+++|=.-.| ++-+...+.++...++|+.++-.+..- ..+. ...
T Consensus 99 ~~~L~~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~lavp--la~~------------~~g 163 (395)
T COG2807 99 LPLLFLGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAALAVP--LAQH------------SGG 163 (395)
T ss_pred HHHHHHHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhhhhH--HHHh------------hcc
Confidence 3455667788888888888888888877775 455889999999999999998755532 1111 135
Q ss_pred hHHHHHHHHHHHHHHhhheeEEeeccCCCCCCCCCCCCCCCCCCCcccccccccCCCCCCCCCCCCCCccCCcccchhhh
Q 012185 126 LKAAFLVAVVFLTLCALVTIYFADEVPLTVNQPNHLTDSAPLLDDPQRNAISKSKHDMPAAPNANGNKVESGHESDANLK 205 (469)
Q Consensus 126 ~~~~f~i~~i~~~i~~~it~~~v~E~p~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (469)
||....+=+.+.++.+++ ..|...+ +...++ +
T Consensus 164 W~~aL~~WAl~allAl~~---WlPq~~r-~~~~~~---~----------------------------------------- 195 (395)
T COG2807 164 WRGALGFWALLALLALLI---WLPQALR-EQAASI---A----------------------------------------- 195 (395)
T ss_pred HHHHHHHHHHHHHHHHHH---Hhhhccc-cccccc---c-----------------------------------------
Confidence 777776666666555554 2443211 100000 0
Q ss_pred hhhccccccCCCCCCCccchHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHH
Q 012185 206 HISKKAEDTNGSFNDGPGAVLVNLLTSLRHLPPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYD 285 (469)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~mP~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~ 285 (469)
. ...+-+.+|++ +.-|.+-+-.=++-+.+++.+-..+.++.|.-+.. -+
T Consensus 196 -----~----------~~~~~~~vw~~-----~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa-----------~~ 244 (395)
T COG2807 196 -----T----------KLVSVRKVWRS-----PLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSA-----------AE 244 (395)
T ss_pred -----c----------ccccccccccC-----chhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCH-----------HH
Confidence 0 00011223333 22333333333344445555555555544422211 12
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHhHHHhhhhc-CchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHH
Q 012185 286 QGVREGAFGLLLNSVVLGVSSFLIEPMCRWI-GSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVA 364 (469)
Q Consensus 286 ~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~i-g~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (469)
.| +.+-+..++++..++..|.+.+|. ++|++.+...+.+.++.+++.+... + .
T Consensus 245 aG-----~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~---~----------------~-- 298 (395)
T COG2807 245 AG-----SLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPG---Q----------------L-- 298 (395)
T ss_pred hh-----hHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhh---h----------------H--
Confidence 22 233345578888999999999865 5677777777777777766665542 1 1
Q ss_pred HHHHHHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCc
Q 012185 365 SLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGG 430 (469)
Q Consensus 365 ~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~ 430 (469)
.+.-+.++|++++..+.+-..++....++. +..+.-.|.....-|+=-...+..+|.+.|+.|+-
T Consensus 299 ~~lw~~llG~G~G~~F~laL~li~~rs~~a-~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw 363 (395)
T COG2807 299 PILWALLLGLGQGGAFPLALTLILLRSSDA-AIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSW 363 (395)
T ss_pred HHHHHHHHhCccchHHHHHHHHHHhhcCCh-HHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCCh
Confidence 111146789999887777666666655543 23333333333333333333455677788888754
No 204
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=97.51 E-value=0.0022 Score=65.82 Aligned_cols=175 Identities=16% Similarity=0.098 Sum_probs=101.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhc
Q 012185 237 PPAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWI 316 (469)
Q Consensus 237 P~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~i 316 (469)
|++++..-...|+-++++-.+.-|.+.|+.| ++.++ ...| +.+.++.+...+.+.+.+++.||+
T Consensus 3 ~~~~~~~~~~~~~~~~~~g~~~p~l~~~l~~--~g~s~-------------~~iG-~~~~~~~l~~~l~~~~~g~l~dr~ 66 (382)
T PRK11128 3 LQPTRWLALSYFGYFFAYGVFLPFWSVWLKG--QGYTP-------------ETIG-LLLGAGLVARFLGSLLIAPRVKDP 66 (382)
T ss_pred CcccHHHHHHHHHHHHHHHHHhhhHHHHHHh--cCCCH-------------HHHH-HHHHHHHHHHHhhhHHHHHHHhhh
Confidence 4455554444555566666666666677755 33321 1233 344557778888888899999999
Q ss_pred Cch----HHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhcccc
Q 012185 317 GSR----LVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTA 392 (469)
Q Consensus 317 g~r----~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p 392 (469)
||| +...++....+ ..+.. .. + +.+..++...+.|+..+.......+++.+..+
T Consensus 67 g~~~~~~~~~~~~~~~~~-----~~~~~-~~-~---------------~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~~~ 124 (382)
T PRK11128 67 SQLIPALRLLALLTLLFA-----VAFWF-GA-H---------------SFWLLFVAIGLFNLFFSPLVPLTDALANTWQK 124 (382)
T ss_pred cchHHHHHHHHHHHHHHH-----HHHHH-hc-c---------------cHHHHHHHHHHHHHHHcccccHHHHHHHHHHh
Confidence 984 32222221111 11111 00 1 24444445555666655555544556665532
Q ss_pred CCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccCC
Q 012185 393 DSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL 456 (469)
Q Consensus 393 ~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpet 456 (469)
+++..+|..+....++..+.+...+.+.+..|- ...|++.++..++..+ ..++.||+
T Consensus 125 ----~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~--~~~f~~~~~~~~~~~~-~~~~~~~~ 181 (382)
T PRK11128 125 ----QIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGE--QAILWILTAGVASMLL-GQLLRPTI 181 (382)
T ss_pred ----hccCCcchHHHHHHHHHHHHHHHHHHHHHHcCh--hHHHHHHHHHHHHHHH-HHHccCCC
Confidence 345667888888889999999888888776663 3567777766555554 34455654
No 205
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=97.47 E-value=0.0011 Score=71.89 Aligned_cols=131 Identities=15% Similarity=0.117 Sum_probs=84.8
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
|-...+.+.+.+...+.++++|.+|||...+++.++..+++...+... +.-..+...++.
T Consensus 82 w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~--------------------~~~~~iag~~l~ 141 (599)
T PF06609_consen 82 WFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQ--------------------NMNTFIAGMVLY 141 (599)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCC--------------------cHHHHHHHHHHH
Confidence 444556677777888899999999999999999998888776655443 233455667777
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecc--cCccchHHHHHHHHHHHHHHHhh
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALF--GGGNIPAFVLASLSALAGGVVAT 450 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~--g~~~~~~f~~~~v~~liaai~~~ 450 (469)
|++.+..... ...++|..|.+ .++...++.. +|-++.....+.+-+.+ ..+.++.|++.++...++.+...
T Consensus 142 GvgaG~~~~~-~~~isEl~p~k--~R~~~~~~~~----~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~ 214 (599)
T PF06609_consen 142 GVGAGVQELA-ALAISELVPNK--WRGLGLAIAS----IPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIF 214 (599)
T ss_pred HHhhHHHHHH-HHHHHHhcccc--hhhhHhHHHH----HHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHH
Confidence 8877765544 44589999986 4444444444 33333222222222111 22357888888888777776544
No 206
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=97.45 E-value=0.00025 Score=78.11 Aligned_cols=156 Identities=13% Similarity=0.049 Sum_probs=106.0
Q ss_pred HHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCC-------------cccCC--------
Q 012185 297 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGG-------------IEHGI-------- 355 (469)
Q Consensus 297 i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~-------------~~~~~-------- 355 (469)
.+.+..++..++...+.||.|||+.+.+|.++++++.+..++...... .|+.. ...+.
T Consensus 76 ~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~-~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 154 (633)
T TIGR00805 76 SYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSG-RYSYSTTVSSTGNLSSANSFLCMENLTQALR 154 (633)
T ss_pred hhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcC-CccccccccccccccccccccccCCCCCCcc
Confidence 466677888888999999999999999999999988877665432210 00000 00000
Q ss_pred ---------CCc--hhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccce
Q 012185 356 ---------GAN--QAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWD 424 (469)
Q Consensus 356 ---------~~~--~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~ 424 (469)
... .......++.-.+.|++-+....+-.+++.|..|.+ .+|+++|+++....+...+..++.+.+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~--~~~~~~~i~~~~~~iG~~lG~llgg~l~ 232 (633)
T TIGR00805 155 PTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSK--NSPLYIGILESIAVFGPAFGYLLGSFCL 232 (633)
T ss_pred ccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCcc--ccHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 000 012344556777899999999999999999999876 7899999999999999988887777665
Q ss_pred ecccC--------------c------cchHHHHHHHHHHHHHHHhhhcccCC
Q 012185 425 ALFGG--------------G------NIPAFVLASLSALAGGVVATLKLPHL 456 (469)
Q Consensus 425 ~~~g~--------------~------~~~~f~~~~v~~liaai~~~~~vpet 456 (469)
+...+ + .+..|++.+++.++.++ .++++|++
T Consensus 233 ~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v-~l~~~p~~ 283 (633)
T TIGR00805 233 QIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSI-PFFFFPKA 283 (633)
T ss_pred hcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHH-HHHhCccc
Confidence 43210 0 11237777777777666 34555554
No 207
>PTZ00207 hypothetical protein; Provisional
Probab=97.43 E-value=0.0066 Score=66.09 Aligned_cols=34 Identities=15% Similarity=0.193 Sum_probs=28.3
Q ss_pred cchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHH
Q 012185 63 VQGPARALLADLSGPDQRNSANAIFCSWMAVGNIL 97 (469)
Q Consensus 63 ~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~il 97 (469)
...++...+.+..| ++|+++.++...+.++|+.+
T Consensus 137 ~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI 170 (591)
T PTZ00207 137 FDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAI 170 (591)
T ss_pred HHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHH
Confidence 34466778888875 78999999999999999975
No 208
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.42 E-value=0.0024 Score=70.21 Aligned_cols=111 Identities=17% Similarity=0.247 Sum_probs=76.8
Q ss_pred CCccchhhHHHHHHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhcccccc-----chh-hhhhc
Q 012185 40 GTRTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASG-----SWH-RWFPF 113 (469)
Q Consensus 40 ~~~~~~i~~~v~g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~-----~w~-~~~~~ 113 (469)
+.+.+...+.++|-.+..++.-..+..-..||-|.+.+++-..-.++...+..+|=++||++|++. |+. .-...
T Consensus 231 ~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~i 310 (735)
T KOG3626|consen 231 ESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGI 310 (735)
T ss_pred cCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCC
Confidence 334445567888999999999999999999999999999999999999999999999999999863 331 10000
Q ss_pred ccchhhhcccchhHHHHHHHHHHHHHHhhheeEEeeccC
Q 012185 114 LTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVP 152 (469)
Q Consensus 114 ~~~~~~~~~~~~~~~~f~i~~i~~~i~~~it~~~v~E~p 152 (469)
..++ .++. +.|-.=|+++..+.+++.+...++=+|.|
T Consensus 311 t~~D-PrWI-GAWWlGFLi~g~~~~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 311 TPTD-PRWI-GAWWLGFLICGALLLFSAVPLFFFPKELP 347 (735)
T ss_pred CCCC-cchh-hHHHHHHHHHHHHHHHHHHHHHhCcccCc
Confidence 1111 1112 23445577777777666655444333433
No 209
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.39 E-value=0.017 Score=59.89 Aligned_cols=112 Identities=8% Similarity=0.037 Sum_probs=72.1
Q ss_pred CeeehhHHHHHHHHHhhcchhhHhhhcCCCcccccccCCCccchhhHHHHHHHHHhcc---ccccchhHHHHHhcCCCcc
Q 012185 2 HIKVRKKTAIYSCRMSDDFCCYIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLA---NNTVQGPARALLADLSGPD 78 (469)
Q Consensus 2 pfi~~g~~~~~i~llll~~~~~i~~~l~d~~~~~~~~~~~~~~~i~~~v~g~~llD~a---~n~~~~p~rAli~D~~p~~ 78 (469)
|.|+.+++.-++..+++-|++.+... -++++. ..++.....+||=-.+|++
T Consensus 72 pviil~~~~~i~t~~lll~~~sv~~m--------------------------q~~q~~yg~~~a~evay~sYiys~v~~~ 125 (412)
T PF01770_consen 72 PVIILQALSYIITWLLLLFGTSVLAM--------------------------QLMQFFYGLATAAEVAYYSYIYSVVDKE 125 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHCcHHHH--------------------------HHHHHHHHHHHHHHHHHHHHheeecCHH
Confidence 55666777767777777766655221 122222 2334556778999999999
Q ss_pred chhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHHhhheeEEeeccCC
Q 012185 79 QRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPL 153 (469)
Q Consensus 79 qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~~~it~~~v~E~p~ 153 (469)
+-+++-++.....-+|..+|.++|-.. ..+ -..+++.+..++.....+++++.+ +.|-.+.
T Consensus 126 ~yq~vts~~raa~l~g~~~s~~lgQll-----vs~--------~~~sy~~L~~isl~~~~~a~~~~~-fLP~~~~ 186 (412)
T PF01770_consen 126 HYQKVTSYTRAATLVGRFISSLLGQLL-----VSF--------GGVSYFQLNYISLASVSLALLIAL-FLPMPKR 186 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHh--------cCCCHHHHHHHHHHHHHHHHHHHH-HcCCCCc
Confidence 999999988888888888888887531 111 023677777787776666665544 4665443
No 210
>PF13347 MFS_2: MFS/sugar transport protein
Probab=97.34 E-value=0.00055 Score=71.47 Aligned_cols=148 Identities=17% Similarity=0.159 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHHHhHHHhhh----hcCchHHHHH-HHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHH
Q 012185 294 GLLLNSVVLGVSSFLIEPMCR----WIGSRLVWAI-SNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVV 368 (469)
Q Consensus 294 ~l~i~~iv~~i~s~i~~~l~~----~ig~r~l~~~-s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (469)
.+.+.-+..++...+.+.++| |+||||.|+. |.+..++++..+..... .+. . +........+.
T Consensus 42 i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p---~~~--------~-~~~~~~~~~~~ 109 (428)
T PF13347_consen 42 ILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPP---AGL--------S-FTAKLVWLFVF 109 (428)
T ss_pred HHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhcccc---chh--------h-hhhHHHHHHHH
Confidence 334455666777778888999 7899998884 77888776655443310 000 0 00012223455
Q ss_pred HHHhccchhhhcccc-chhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCc-----cchHHHHHHHHH
Q 012185 369 FTLLGFPLAITYSVP-FAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGG-----NIPAFVLASLSA 442 (469)
Q Consensus 369 ~~~~Gi~~a~~~~vP-~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~-----~~~~f~~~~v~~ 442 (469)
..++.++|... .+| .++++|..++. +++..-.+.-+....++.++++.+.+.+++.+|++ ......+.++..
T Consensus 110 ~~l~~~~~t~~-~i~~~al~~~lt~~~-~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~ 187 (428)
T PF13347_consen 110 YILFDIAYTFV-QIPYNALIPELTPDP-DERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVG 187 (428)
T ss_pred HHHHHHhhhhc-cCchhhcCccccccH-hhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHH
Confidence 55568888854 666 47888888764 35667788888888888888888888888776643 234455566666
Q ss_pred HHHHHHhhhcccC
Q 012185 443 LAGGVVATLKLPH 455 (469)
Q Consensus 443 liaai~~~~~vpe 455 (469)
+++.+.+.+.++|
T Consensus 188 ~v~~~i~~~~~ke 200 (428)
T PF13347_consen 188 LVFFLITFFFVKE 200 (428)
T ss_pred HHHhhhhhheeee
Confidence 6677767778888
No 211
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.32 E-value=0.0036 Score=64.83 Aligned_cols=76 Identities=18% Similarity=0.120 Sum_probs=45.2
Q ss_pred CCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHHhhheeEEeeccCCC
Q 012185 75 SGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPLT 154 (469)
Q Consensus 75 ~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~~~it~~~v~E~p~~ 154 (469)
.|++||..|+....+-.-+|..+|+++..++ .|-..+. .........+|+....+..+.+..+.+..+|+|..
T Consensus 169 F~~~qra~A~~~~v~~n~LGvavg~llppil-----V~~~~~~--~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~t 241 (480)
T KOG2563|consen 169 FPPDQRAIATVLGVMGNPLGVAVGFLLPPIL-----VPSSKDS--EDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPT 241 (480)
T ss_pred CCcchhhhhhhHHHhcchHHHHHHhhcccee-----cCCCCCc--chhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 4789999999999887779999999888762 2211000 00111233345544444334445566677787765
Q ss_pred CCC
Q 012185 155 VNQ 157 (469)
Q Consensus 155 ~~~ 157 (469)
|..
T Consensus 242 Pps 244 (480)
T KOG2563|consen 242 PPS 244 (480)
T ss_pred CCc
Confidence 543
No 212
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=97.30 E-value=0.0038 Score=66.13 Aligned_cols=140 Identities=13% Similarity=0.124 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccch
Q 012185 297 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPL 376 (469)
Q Consensus 297 i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~ 376 (469)
++.+-.++.+++.+.+.||+|||..+.++.++..++.+.+.+.... + ...+.++.=.+.|+..
T Consensus 68 ~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~--~---------------~~e~li~GR~i~Gl~~ 130 (485)
T KOG0569|consen 68 IFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSA--P---------------SFEMLILGRLIVGLAC 130 (485)
T ss_pred HHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHh--h---------------hHHHHHHHHHHHHHHh
Confidence 4667788899999999999999999988887776665555544322 1 2445555556677777
Q ss_pred hhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchH--HHHHHHHHHHHHHHhhhccc
Q 012185 377 AITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPA--FVLASLSALAGGVVATLKLP 454 (469)
Q Consensus 377 a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~--f~~~~v~~liaai~~~~~vp 454 (469)
+....+-=..++|.-|++ -+|..-..+.+++.+...+..+...+ +.+|++..|. +.+..+.+++..+ .+.++|
T Consensus 131 gl~~~~~pmyl~E~sP~~--~RG~~g~~~~~~~~~g~ll~~~~~l~--~ilGt~~~W~~l~~~~~i~~~~~l~-~l~~~P 205 (485)
T KOG0569|consen 131 GLSTGLVPMYLTEISPKN--LRGALGTLLQIGVVIGILLGQVLGLP--SLLGTEDLWPYLLAFPLIPALLQLA-LLPFLP 205 (485)
T ss_pred HHHHHHHHHHHhhcChhh--hccHHHHHHHHHHHHHHHHHHHHccH--HhcCCCcchHHHHHHHHHHHHHHHH-HHhcCC
Confidence 766665556788999987 67877888888888888777443322 3345544332 3444444454444 778899
Q ss_pred CCCC
Q 012185 455 HLSS 458 (469)
Q Consensus 455 et~g 458 (469)
|+-.
T Consensus 206 ESPk 209 (485)
T KOG0569|consen 206 ESPK 209 (485)
T ss_pred CCcc
Confidence 9744
No 213
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=97.30 E-value=0.0058 Score=62.70 Aligned_cols=158 Identities=12% Similarity=0.080 Sum_probs=92.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCch
Q 012185 240 MHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSR 319 (469)
Q Consensus 240 l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r 319 (469)
.+.+++..|+-.+++-.+.-|.+.|..| ++-++ - .+| +.+.++.+...+...+.+++.||+|||
T Consensus 6 ~~~l~~~~~~~~~~~~~~~p~l~~~l~~--~g~s~---------~----~ig-~~~s~~~~~~~~~~~~~g~l~d~~~~~ 69 (382)
T TIGR00902 6 FRWLALGFFGYFCAYGIFLPFFPAWLKG--IGLGE---------E----MIG-LLIGAALIARFAGGLFFAPLIKDANHI 69 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCH---------H----HHH-HHHHHHHHHHHHHHHHHHHHHHhcCcH
Confidence 3445555555555666666677777754 23221 1 122 333356677788888899999999974
Q ss_pred HH----HHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCC
Q 012185 320 LV----WAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSG 395 (469)
Q Consensus 320 ~l----~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~ 395 (469)
.. ...+..++.+. ...+.. +.+..++...+.|..++....+..++..+. +
T Consensus 70 ~~~~~~~~~~~~l~~~~--~~~~~~--------------------~~~~l~~~~~l~~~~~~~~~p~~~al~~~~-~--- 123 (382)
T TIGR00902 70 IIALRLLALASAIFAAA--FSAGAH--------------------NAWLLFIAIGLFALFFSAGMPIGDALANTW-Q--- 123 (382)
T ss_pred HHHHHHHHHHHHHHHHH--HHHhhh--------------------hHHHHHHHHHHHHHHHccchhHHHHHHHHH-H---
Confidence 33 22222222211 011111 234444455556766666555555555443 2
Q ss_pred CCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHH
Q 012185 396 GGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLS 441 (469)
Q Consensus 396 ~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~ 441 (469)
+++|..+|.......++.++.+...+.+.+..|-. ..|.+.++.
T Consensus 124 ~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~--~~f~~~~~~ 167 (382)
T TIGR00902 124 KQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQ--NILAILTAG 167 (382)
T ss_pred HHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChh--HHHHHHHHH
Confidence 24678899999999999999998888888777633 455555443
No 214
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.25 E-value=0.023 Score=60.66 Aligned_cols=118 Identities=12% Similarity=0.092 Sum_probs=71.0
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcC--chH-----HHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHH
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIG--SRL-----VWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVAS 365 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig--~r~-----l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (469)
|--.++.+...+.+=++.++=.|.. +|. =+.+|.++.+++++.+.+......++ ..+ +.+..
T Consensus 312 ~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~g~~f~~l~~~~~~~~~~--~~~---------s~~wl 380 (493)
T PRK15462 312 MFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMY--GHS---------SLPLM 380 (493)
T ss_pred HHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCC--CCc---------CHHHH
Confidence 3334566655555555444434442 221 15678888888877666544322110 001 12334
Q ss_pred HHHHHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHH-HHHHHHHhhccccc
Q 012185 366 LVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAI-VIPQMIVSLGAGPW 423 (469)
Q Consensus 366 ~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i-~l~Qil~s~~~g~l 423 (469)
+....+.+++=-...-+-.++++++-|++ -+|.+||+..+.. .++|.+.+.+.+..
T Consensus 381 ~~~~~~~t~gEl~~sPvgls~~~~laP~~--~~g~~mg~w~l~~~~~~~~~~g~~~~~~ 437 (493)
T PRK15462 381 VLGLAVMGFAELFIDPVAMSQITRIEIPG--VTGVLTGIYMLLSGAIANYLAGVIADQT 437 (493)
T ss_pred HHHHHHHHHHHHHHChHHHHHHHHhChHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44555566666667777788999999975 7899999998744 78888877655543
No 215
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=97.20 E-value=0.001 Score=56.54 Aligned_cols=85 Identities=21% Similarity=0.303 Sum_probs=63.6
Q ss_pred HHHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHH
Q 012185 51 IGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAF 130 (469)
Q Consensus 51 ~g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f 130 (469)
+...+..++....+....+++.|..|+++|++++++.+....+|..++..++... .. ..+++..|
T Consensus 56 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-----~~----------~~~~~~~~ 120 (141)
T TIGR00880 56 IARFLQGFGAAFALVAGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVL-----AQ----------FLGWRAPF 120 (141)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHH-----hc----------ccchHHHH
Confidence 3456677777778888999999999999999999999999999999988777642 10 12466777
Q ss_pred HHHHHHHHHHhhheeEEeec
Q 012185 131 LVAVVFLTLCALVTIYFADE 150 (469)
Q Consensus 131 ~i~~i~~~i~~~it~~~v~E 150 (469)
.+..+..+++.....+..||
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 121 LFLAILALAAFILLAFLLPE 140 (141)
T ss_pred HHHHHHHHHHHHHHhhcCCC
Confidence 77766666665555555555
No 216
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=97.17 E-value=1.4e-05 Score=83.71 Aligned_cols=140 Identities=14% Similarity=0.091 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccch
Q 012185 297 LNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPL 376 (469)
Q Consensus 297 i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~ 376 (469)
...+...+.+++.+.+.||+|||+.+.++.+++.++.+...+.... .+.+...+.-.+.|++.
T Consensus 54 ~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~-----------------~~~~~~~~~R~~~G~~~ 116 (451)
T PF00083_consen 54 SFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSY-----------------NNFWMLLIGRFLIGFGI 116 (451)
T ss_pred HHHhhhcccccccccccccccccccccccccccccccccccccccc-----------------ccccccccccccccccc
Confidence 3445667778899999999999999999988887766555544310 02445556667789988
Q ss_pred hhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceeccc-CccchHHHHHHHHHHHHHHHhhhcccC
Q 012185 377 AITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFG-GGNIPAFVLASLSALAGGVVATLKLPH 455 (469)
Q Consensus 377 a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g-~~~~~~f~~~~v~~liaai~~~~~vpe 455 (469)
|....+-..++.|..|++ .+|....+.+++..+++++.....-.+-+..+ ......+.+.++.+++..+ ...++||
T Consensus 117 g~~~~~~~~~~~E~~~~~--~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~-~~~~~pE 193 (451)
T PF00083_consen 117 GGAYVVSPIYISEIAPPK--HRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLL-LRFFLPE 193 (451)
T ss_pred cccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccc
Confidence 888888888999999987 56888999999988888776654433311111 1123456667776665554 5578898
Q ss_pred C
Q 012185 456 L 456 (469)
Q Consensus 456 t 456 (469)
+
T Consensus 194 S 194 (451)
T PF00083_consen 194 S 194 (451)
T ss_pred c
Confidence 7
No 217
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=97.05 E-value=0.0076 Score=61.93 Aligned_cols=166 Identities=19% Similarity=0.193 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHH
Q 012185 244 LIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWA 323 (469)
Q Consensus 244 ~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~ 323 (469)
..+.|..|+-|-+...+.++ .|+=++ -|. + +-..+-.++..+.-++.+.+.||+|-|+.++
T Consensus 23 f~v~F~VW~l~s~l~~~i~~-----~~~LS~---------~q~----~-ll~aiPil~GallRl~~g~l~drfGgR~~~~ 83 (417)
T COG2223 23 FDVGFMVWTLFSPLGVFIKS-----DFGLSE---------GQK----G-LLVAIPILVGALLRLPYGFLTDRFGGRKWTI 83 (417)
T ss_pred HHHHHHHHHHHHHHHhhhcc-----ccCCCH---------HHH----H-HHHHHHHHHhHHHHHHHHhhhcccCchHHHH
Confidence 34566778888787777762 343221 011 1 1222344566777788899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCCccchhh
Q 012185 324 ISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIG 403 (469)
Q Consensus 324 ~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~g 403 (469)
++.++..+-.+.+++.... + +.+..+++-.++|++=+ ...+-.+.+++.+|++ ++|+.+|
T Consensus 84 ~s~~l~~IP~~~~~~a~~~---------------~--~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~--~qG~AlG 143 (417)
T COG2223 84 LSMLLLLIPCLGLAFAVTY---------------P--STWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKE--KQGLALG 143 (417)
T ss_pred HHHHHHHHHHHHHHHHccC---------------C--chHHHHHHHHHHhcccc-eehcccccccccCChh--hhhHHHH
Confidence 9999988877777666521 1 12334444444555444 3444556899999986 7899898
Q ss_pred HH---HHHHHHHHHHHhhccccceecccC-ccchHHHHHHHHHHHHHHHhhhc
Q 012185 404 VL---NLAIVIPQMIVSLGAGPWDALFGG-GNIPAFVLASLSALAGGVVATLK 452 (469)
Q Consensus 404 i~---n~~i~l~Qil~s~~~g~l~~~~g~-~~~~~f~~~~v~~liaai~~~~~ 452 (469)
|. |+-..+.|++.+. +....|. ....+..+..+..+++++..++.
T Consensus 144 I~g~GN~G~av~q~~~P~----v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~ 192 (417)
T COG2223 144 IAGAGNLGVAVAQLVAPL----VAVAFGFLAWRNVAGIYVVALAIAAVLAWLG 192 (417)
T ss_pred HhccccccHHHHHHHHHH----HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87 5556666666554 3333331 01123444444455555544444
No 218
>PRK09669 putative symporter YagG; Provisional
Probab=96.93 E-value=0.0048 Score=64.70 Aligned_cols=148 Identities=17% Similarity=0.152 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhh----cCchHHHHH-HHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHH
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRW----IGSRLVWAI-SNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLV 367 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~----ig~r~l~~~-s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (469)
..+.+.-+.-++...+.+.++|| +||||.|++ +.+.++++...+.... +. + ........++
T Consensus 49 ~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p-----~~--------~-~~~~~~~~~~ 114 (444)
T PRK09669 49 TMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTP-----DF--------G-ATGKIIYACV 114 (444)
T ss_pred HHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCC-----CC--------C-cchHHHHHHH
Confidence 45556667778888888999998 688777774 6677766544332221 00 0 0011222334
Q ss_pred HHHHhccchhhhccccc-hhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCcc-----chHHHHHHHH
Q 012185 368 VFTLLGFPLAITYSVPF-AITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGN-----IPAFVLASLS 441 (469)
Q Consensus 368 ~~~~~Gi~~a~~~~vP~-aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~-----~~~f~~~~v~ 441 (469)
...++++.+.. ..+|| ++.+|..++. ++++...+.-.....+...+.+....++...++.+. ...+.+.++.
T Consensus 115 ~~~l~~~~~t~-~~ip~~al~~~~t~~~-~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii 192 (444)
T PRK09669 115 TYILLSLVYTA-INVPYCAMPGAITNDP-RERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLL 192 (444)
T ss_pred HHHHHHHHHHh-hcchHHHhHHHhcCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHH
Confidence 44455666664 55666 5666766543 245555566666666666666655555554443211 1234444444
Q ss_pred HHHHHHHhhhcccCC
Q 012185 442 ALAGGVVATLKLPHL 456 (469)
Q Consensus 442 ~liaai~~~~~vpet 456 (469)
+++..+.+++..+|.
T Consensus 193 ~~v~~~~~~~~~~e~ 207 (444)
T PRK09669 193 GVVLFFCCFFMTKER 207 (444)
T ss_pred HHHHHHHHhCCeEEe
Confidence 444444455555543
No 219
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.92 E-value=0.0076 Score=63.92 Aligned_cols=137 Identities=16% Similarity=0.051 Sum_probs=104.4
Q ss_pred HHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchh
Q 012185 298 NSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLA 377 (469)
Q Consensus 298 ~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a 377 (469)
+..-..+..+..+.+.||+|.|+++..+.++-+++-+.+.+.... ..+.++++=.+.|++.+
T Consensus 82 ~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~------------------~~~~~~~~R~lqGl~~g 143 (466)
T KOG2532|consen 82 FFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASI------------------GFYLLLVLRFLQGLGQG 143 (466)
T ss_pred HHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHh------------------cchhhHHHHHHhHHHHh
Confidence 335567778888999999999999999888877655544444311 13355677778999999
Q ss_pred hhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceec-ccCccchHHHHHHHHHHHHHHHhhhcccCC
Q 012185 378 ITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDAL-FGGGNIPAFVLASLSALAGGVVATLKLPHL 456 (469)
Q Consensus 378 ~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~-~g~~~~~~f~~~~v~~liaai~~~~~vpet 456 (469)
+....=-.+.++..|.+ .+++..+++.+...+..++.-.+.|.+.+. .| ...+|++.|+++++-.+.-.+++.|.
T Consensus 144 ~~~pa~~~i~~~W~P~~--Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~G--W~sifY~~g~~g~i~~~~w~~~~~d~ 219 (466)
T KOG2532|consen 144 VLFPAIGSILAKWAPPN--ERSTFIAILTAGSQLGTIITMPVSGLLCESSLG--WPSIFYVFGIVGLIWFILWFLFYSDS 219 (466)
T ss_pred HHHhhhhceeeeECCHH--HHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCC--CchHHHHHHHHHHHHHHHHHHHhcCC
Confidence 88888888889999987 689999999999999999888888888877 55 34789998988887776333444443
No 220
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=96.90 E-value=0.012 Score=60.34 Aligned_cols=147 Identities=19% Similarity=0.127 Sum_probs=81.2
Q ss_pred HHHHH-HHHHHHHHHHHHHhHHH-hhhhcCchHHHHHHH-HHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHH
Q 012185 290 EGAFG-LLLNSVVLGVSSFLIEP-MCRWIGSRLVWAISN-FIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASL 366 (469)
Q Consensus 290 ~G~~~-l~i~~iv~~i~s~i~~~-l~~~ig~r~l~~~s~-~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (469)
+|.+. +.+..+...+.+-+.++ ..||.||||.|++.. ++.+++.....+.... . ....+. +
T Consensus 38 iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~--~-------------~~~~~~-~ 101 (390)
T TIGR02718 38 LAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPD--V-------------AGAGWA-V 101 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcc--h-------------hhHHHH-H
Confidence 45443 23445566666666655 678899999997654 3334333333322110 0 001111 2
Q ss_pred HHHHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHH
Q 012185 367 VVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGG 446 (469)
Q Consensus 367 ~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaa 446 (469)
......+...++....--++..|..+.+ ..+...++......+..++.+...+.+.+..| ....|.+.+++.++..
T Consensus 102 ~~~~~~~~~~a~~d~~~d~~~~~~~~~~--~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~g--w~~~f~~~a~l~~~~~ 177 (390)
T TIGR02718 102 GLLACASLASATQDIATDGMAAEHFNGR--TLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFG--QRPAFLLVACVPLASL 177 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHh--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--HHHHHHHHHHHHHHHH
Confidence 2222233444444333223444544433 45666777777777888888777777776665 3467888888887777
Q ss_pred HHhhhcccCC
Q 012185 447 VVATLKLPHL 456 (469)
Q Consensus 447 i~~~~~vpet 456 (469)
+..++..|++
T Consensus 178 ~~~~~~~~~~ 187 (390)
T TIGR02718 178 VCVLWLKDRA 187 (390)
T ss_pred HHHHHcCCCC
Confidence 7555555554
No 221
>PRK10429 melibiose:sodium symporter; Provisional
Probab=96.83 E-value=0.0065 Score=64.45 Aligned_cols=148 Identities=11% Similarity=0.141 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHHHhHHHhhh----hcCchHHHHH-HHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHH
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCR----WIGSRLVWAI-SNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLV 367 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~----~ig~r~l~~~-s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (469)
..+.+.-+.-++..-+.+.++| |+||||.|+. |.+.+++++..+.... + .+ +....+..++
T Consensus 46 ~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p----~---------~~-~~~~~~~~~~ 111 (473)
T PRK10429 46 TLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAH----L---------FE-GTAQYVFVCV 111 (473)
T ss_pred HHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCC----C---------CC-ccHHHHHHHH
Confidence 3445566777888888999999 5599888775 7766666543332110 0 00 1111222334
Q ss_pred HHHHhccchhhhccccc-hhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCcc-----chHHHHHHHH
Q 012185 368 VFTLLGFPLAITYSVPF-AITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGN-----IPAFVLASLS 441 (469)
Q Consensus 368 ~~~~~Gi~~a~~~~vP~-aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~-----~~~f~~~~v~ 441 (469)
...++++.++ ...+|| ++++|..++. +++....+.-.....+..++++....++++.+|+.. .....+.++.
T Consensus 112 ~~~l~~~~~t-~~~ip~~al~~~lt~~~-~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~ 189 (473)
T PRK10429 112 TYILWGMTYT-IMDIPFWSLVPTLTLDK-REREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAF 189 (473)
T ss_pred HHHHHHHHHH-HHcchHHhhhHHhCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHH
Confidence 4445677776 445677 6778877543 234444555444445555555544444433333211 1223344444
Q ss_pred HHHHHHHhhhcccCC
Q 012185 442 ALAGGVVATLKLPHL 456 (469)
Q Consensus 442 ~liaai~~~~~vpet 456 (469)
.+++.+.+++.+||.
T Consensus 190 ~~~~~~~~~~~~~e~ 204 (473)
T PRK10429 190 FIVSTIITLRNVHEV 204 (473)
T ss_pred HHHHHHHHHcCceec
Confidence 444455455556664
No 222
>PRK11462 putative transporter; Provisional
Probab=96.81 E-value=0.011 Score=62.63 Aligned_cols=119 Identities=13% Similarity=0.150 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHHhHHHhhhh----cCchHHHHH-HHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHH
Q 012185 294 GLLLNSVVLGVSSFLIEPMCRW----IGSRLVWAI-SNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVV 368 (469)
Q Consensus 294 ~l~i~~iv~~i~s~i~~~l~~~----ig~r~l~~~-s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (469)
.+++.=+.-++.--+++.++|| +||||.|+. |.+.+++++..+.... + .+......+ ..+.
T Consensus 50 i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p----~---------~s~~~~~~y-~~~~ 115 (460)
T PRK11462 50 MFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTP----D---------LSMNGKMIY-AAIT 115 (460)
T ss_pred HHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCC----C---------CCcchHHHH-HHHH
Confidence 3344445556667777888886 699999985 6677777654333221 0 000111223 3344
Q ss_pred HHHhccchhhhccccc-hhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceeccc
Q 012185 369 FTLLGFPLAITYSVPF-AITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFG 428 (469)
Q Consensus 369 ~~~~Gi~~a~~~~vP~-aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g 428 (469)
..++.+++...+ +|| +|.+|..++. +++....+.-.....+..++.+....++++..|
T Consensus 116 ~~~~~~~~t~~~-ipy~al~~~lt~d~-~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g 174 (460)
T PRK11462 116 YTLLTLLYTVVN-IPYCALGGVITNDP-TQRISLQSWRFVLATAGGMLSTVLMMPLVNLIG 174 (460)
T ss_pred HHHHHHHHHHHh-ccHHHHHHHhcCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 445677887544 687 6667777654 467777888888888887777776666665555
No 223
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=96.78 E-value=0.02 Score=60.66 Aligned_cols=138 Identities=20% Similarity=0.211 Sum_probs=101.8
Q ss_pred HHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhh
Q 012185 299 SVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAI 378 (469)
Q Consensus 299 ~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~ 378 (469)
++...+.+-.++.++||+|||..+....+..-+.-..+.+. .+..+++..+.| ++++
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~----------------------~~~~~~~~~l~g-~~~~ 128 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQ----------------------GYWFFLLLGLSG-GFSA 128 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHH----------------------HHHHhhhccccc-chhh
Confidence 35678888999999999999998887665443222211111 122233444444 5666
Q ss_pred hccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccCCCC
Q 012185 379 TYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSS 458 (469)
Q Consensus 379 ~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpet~g 458 (469)
+.+.-++.+++....+ .+-..+|+.+-+.+..-.+.+...+.+.+..|. ..+|.++....+++.++.+..+||+.-
T Consensus 129 ~~s~~~a~vadis~~~--~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~--a~~f~ia~~~~~~~~~y~~~~l~Esl~ 204 (463)
T KOG2816|consen 129 IFSVGFAYVADISSEE--ERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGI--ALVFLIAAASGILSLLYMLLFLPESLQ 204 (463)
T ss_pred hhhhhhhheeeccchh--HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCc--hHHHHHHHHHHHHHHHHHhhccccccC
Confidence 7888889999998876 456669999999999988888888888877653 367999999999999999999999987
Q ss_pred CCccC
Q 012185 459 NSFRS 463 (469)
Q Consensus 459 ~~~~~ 463 (469)
+.-++
T Consensus 205 ~~~~~ 209 (463)
T KOG2816|consen 205 EKERS 209 (463)
T ss_pred ccccc
Confidence 66554
No 224
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.77 E-value=0.00033 Score=75.59 Aligned_cols=63 Identities=17% Similarity=0.267 Sum_probs=2.9
Q ss_pred ccchhhHHHHHHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccc
Q 012185 42 RTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 104 (469)
Q Consensus 42 ~~~~i~~~v~g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~ 104 (469)
+....++.++|-++.-++....+.--.+||-|.+++++-..-.++...+..+|-.+||++|+.
T Consensus 137 ~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~ 199 (539)
T PF03137_consen 137 LSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSF 199 (539)
T ss_dssp ---------------SSS---------------------------------------------
T ss_pred chHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHH
Confidence 344567888999999999999999999999999999999999999999999999999999975
No 225
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=96.65 E-value=0.032 Score=58.12 Aligned_cols=81 Identities=12% Similarity=0.215 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC-ch
Q 012185 241 HVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG-SR 319 (469)
Q Consensus 241 ~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig-~r 319 (469)
.|++..+|+.|+.|-.+.-|.+.|+.+.-|.+ -+.|.- +.+-.++..++..+.+.+.||.+ +|
T Consensus 5 ~rLs~~~f~~f~~~G~~~p~~~~~L~~~G~s~-----------~qIG~l-----~a~~~~~~i~~~~~~g~~aDr~~~~~ 68 (400)
T PF03825_consen 5 FRLSLMYFLYFFAYGAFLPYLPLYLESRGFSG-----------TQIGIL-----LAVGPLARIVSPPFWGAIADRFGSAK 68 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCH-----------HHHHHH-----HHHHHHHHHHHHHHHHHHHhHhhhHH
Confidence 35777788888877788888888887644432 123332 33455677888888899999975 57
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 012185 320 LVWAISNFIVFACMATTA 337 (469)
Q Consensus 320 ~l~~~s~~~~ai~~~~~~ 337 (469)
|++.+.+++.++.+....
T Consensus 69 ~~l~~~~l~~~~~~~~~~ 86 (400)
T PF03825_consen 69 RILALLSLLSALALLLLA 86 (400)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 777777777666554443
No 226
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=96.65 E-value=0.033 Score=56.41 Aligned_cols=139 Identities=15% Similarity=0.135 Sum_probs=81.8
Q ss_pred HHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhh
Q 012185 300 VVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAIT 379 (469)
Q Consensus 300 iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~ 379 (469)
+.+.+...+.+.+.||+|||+..+.-.++.+++- +.... + +....++.=.+-|++.+.+
T Consensus 80 ~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~sc----l~k~~--~---------------~~~~L~~GRvlgGiaTSLL 138 (354)
T PF05631_consen 80 ASSAIFGTFVGSLADRYGRKKACLLFCILYSLSC----LTKHS--S---------------NYPVLLLGRVLGGIATSLL 138 (354)
T ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHH----HHHhc--c---------------ccHHHHHHHHHHHHHHHHH
Confidence 3567777888999999999999877666555433 23321 1 2445555556678887776
Q ss_pred ccccch-hhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccc----eecccCccchHHHHHHHHHHHHHHHhhhccc
Q 012185 380 YSVPFA-ITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPW----DALFGGGNIPAFVLASLSALAGGVVATLKLP 454 (469)
Q Consensus 380 ~~vP~a-Lise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l----~~~~g~~~~~~f~~~~v~~liaai~~~~~vp 454 (469)
.++.=+ ++.|. .+++-....--..+..+..+.+-++++..|.+ .+..|.+....|..+.++..+++++....=+
T Consensus 139 fS~FEsW~V~Eh-~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ 217 (354)
T PF05631_consen 139 FSAFESWMVHEH-NKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWP 217 (354)
T ss_pred HHHHHHHHHHHH-HHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhccc
Confidence 655433 44554 32210111111222222223344444444443 3344544567799999999999987777778
Q ss_pred CCCCCC
Q 012185 455 HLSSNS 460 (469)
Q Consensus 455 et~g~~ 460 (469)
|+.|+.
T Consensus 218 ENyg~~ 223 (354)
T PF05631_consen 218 ENYGDT 223 (354)
T ss_pred ccCCCc
Confidence 888863
No 227
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=96.65 E-value=0.022 Score=57.62 Aligned_cols=137 Identities=16% Similarity=0.115 Sum_probs=97.4
Q ss_pred HHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhc
Q 012185 301 VLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITY 380 (469)
Q Consensus 301 v~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~ 380 (469)
.-.+.+...+++.||+|.++....+.++.+++.. +.+. ......+....+.|.+.++.+
T Consensus 59 ~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~----iR~~-----------------~~~~~L~~gt~l~G~gIav~n 117 (395)
T COG2807 59 AFGLFAPAAPRLARRFGEERSLFLALLLIAAGIL----IRSL-----------------GGLPLLFLGTLLAGAGIAVIN 117 (395)
T ss_pred HHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHH----HHhc-----------------ccHHHHHHHHHHHHhhHHHHH
Confidence 3455677889999999999999888877665332 2211 125566777778888888888
Q ss_pred cccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccC-CCCC
Q 012185 381 SVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPH-LSSN 459 (469)
Q Consensus 381 ~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpe-t~g~ 459 (469)
.+-=.++-+.+|. +.|..+|++..+..+.+.+++....++.+..++ ....+.+=++.++++.+ . ++|. .|.+
T Consensus 118 VLLPslIK~~Fpk---~~~~mtglYs~sl~~~aaLaa~lavpla~~~~g-W~~aL~~WAl~allAl~-~--WlPq~~r~~ 190 (395)
T COG2807 118 VLLPSLIKRDFPK---RVGLMTGLYSTSLGAGAALAAALAVPLAQHSGG-WRGALGFWALLALLALL-I--WLPQALREQ 190 (395)
T ss_pred HhhhHHHHhhccc---chhhHHhHHHHHHHHHHHHHhhhhhHHHHhhcc-HHHHHHHHHHHHHHHHH-H--Hhhhccccc
Confidence 8766788888886 589999999999999999999888888776632 33556666666666655 4 3444 5554
Q ss_pred CccCCC
Q 012185 460 SFRSSG 465 (469)
Q Consensus 460 ~~~~~~ 465 (469)
.++.++
T Consensus 191 ~~~~~~ 196 (395)
T COG2807 191 AASIAT 196 (395)
T ss_pred cccccc
Confidence 444433
No 228
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.55 E-value=0.033 Score=50.08 Aligned_cols=96 Identities=13% Similarity=0.171 Sum_probs=62.5
Q ss_pred HHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHH
Q 012185 290 EGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVF 369 (469)
Q Consensus 290 ~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (469)
.|..++.+.-.+..+++++.|.+++++|.|+.+++|.+.+++-.+ .+... +.+..+...
T Consensus 38 ~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~--~~~~~-------------------~~~~l~~~s 96 (156)
T PF05978_consen 38 LGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIA--SFFYP-------------------NSYTLYPAS 96 (156)
T ss_pred ccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHH--HHHhh-------------------hHHHHHHHH
Confidence 355666666667788889999999999999999999888864222 22220 356667777
Q ss_pred HHhccchhhhccccchhhhccccCCCCCccchhhHHHHH
Q 012185 370 TLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLA 408 (469)
Q Consensus 370 ~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~ 408 (469)
++.|++-+.+-.---..+.++-.++ .+++..|+.-..
T Consensus 97 ~l~G~~~a~lW~aqg~ylt~~s~~~--~~~~~~~ifw~i 133 (156)
T PF05978_consen 97 ALLGFGAALLWTAQGTYLTSYSTEE--TIGRNTGIFWAI 133 (156)
T ss_pred HHHhhhhHHhhHhhhHHHHHcCCHH--HHhhHHHHHHHH
Confidence 7888888854444345556555443 445555544333
No 229
>PRK09848 glucuronide transporter; Provisional
Probab=96.35 E-value=0.045 Score=57.41 Aligned_cols=39 Identities=13% Similarity=0.069 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhc----CchHHHH-HHHHHHHH
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWI----GSRLVWA-ISNFIVFA 331 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~i----g~r~l~~-~s~~~~ai 331 (469)
..+.+..+..++.+.+.+.++||. ||||.|+ .+.+..++
T Consensus 48 ~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~ 91 (448)
T PRK09848 48 TMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMI 91 (448)
T ss_pred HHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHH
Confidence 445566778888899999999986 8888875 45554443
No 230
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=96.31 E-value=0.019 Score=61.30 Aligned_cols=143 Identities=18% Similarity=0.066 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhc
Q 012185 294 GLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLG 373 (469)
Q Consensus 294 ~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 373 (469)
...++.+..++.-++.+.+.||++..+......+..++-.+++..+. +....+++-.+.|
T Consensus 86 ~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~--------------------s~~~~ialr~llG 145 (495)
T KOG2533|consen 86 LDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVH--------------------SFPGLIALRFLLG 145 (495)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHh--------------------hhHHHHHHHHHHH
Confidence 33456667777888889999999966655554444433222333332 2445556666677
Q ss_pred cchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceeccc----CccchHHHHHHHHHHHHHHHh
Q 012185 374 FPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFG----GGNIPAFVLASLSALAGGVVA 449 (469)
Q Consensus 374 i~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g----~~~~~~f~~~~v~~liaai~~ 449 (469)
+..++..-.--++++..+..+ .+|+-+|+++.+..++|++.+++...+.+.-| .+..+.|++-|+.++..++++
T Consensus 146 l~es~~wP~~~~~lg~wy~~~--e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~ 223 (495)
T KOG2533|consen 146 LFESGGWPGVVAILGNWYGKS--ERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVV 223 (495)
T ss_pred HHhcccchHHHHHHHhhcChh--hhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheE
Confidence 777754444445778888765 78999999999999999999988877644222 123678999999999999988
Q ss_pred hhcccCCCC
Q 012185 450 TLKLPHLSS 458 (469)
Q Consensus 450 ~~~vpet~g 458 (469)
.+++|+...
T Consensus 224 f~~lp~~P~ 232 (495)
T KOG2533|consen 224 FFFLPDNPS 232 (495)
T ss_pred EEEecCChh
Confidence 888886544
No 231
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=96.27 E-value=0.03 Score=58.27 Aligned_cols=177 Identities=16% Similarity=0.135 Sum_probs=95.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcC
Q 012185 238 PAMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIG 317 (469)
Q Consensus 238 ~~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig 317 (469)
++.+++....|+-.+.|-.++-|.+-|+.|+. |- .+..+| .-+.+.++.+.+...+.+.+.||+|
T Consensus 7 ~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~--GL------------s~~~iG-~i~s~~~~~~l~~qp~~G~i~Dklg 71 (412)
T PF01306_consen 7 KNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVA--GL------------SGTEIG-IIFSAGSLFALLAQPVYGFISDKLG 71 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------HHHHH-HHHHHHHHHHHHTHHHHHHHHHHCT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHcccc--CC------------CHHHHH-HHHHHHHHHHHHHHHhHHHhcchhh
Confidence 45666666666555566666667788887621 10 122233 2222355666777777889999999
Q ss_pred chHH--HHHHHHHHHHHHHHH-HHHHhhhhcccCCCcccCCCCchhHH-HHHHHHHHHhccchhhhccccchhhhccccC
Q 012185 318 SRLV--WAISNFIVFACMATT-AIISVISVREYSGGIEHGIGANQAIK-VASLVVFTLLGFPLAITYSVPFAITAELTAD 393 (469)
Q Consensus 318 ~r~l--~~~s~~~~ai~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~ 393 (469)
.||- +.++.++...+-... .+..... . |. ..+++....+|+.+.+...+ .|.+-+
T Consensus 72 ~kK~Ll~~i~~l~~l~~pff~~v~~pll~-~---------------n~~lg~iig~i~l~~~f~~~~~~-----~Ea~~e 130 (412)
T PF01306_consen 72 LKKHLLWFIAILLLLFGPFFIYVFGPLLQ-S---------------NFWLGAIIGGIYLGLVFNAGVPL-----SEAYAE 130 (412)
T ss_dssp TCSHHHHHHHHHHHTCHHHHHHTHHHHHH-T---------------T-HHHHHHTTTTTTTTTTTHHHH-----HHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHH-H---------------HHHHHHHHHHHHHHHHHcccchH-----HHHHHH
Confidence 6653 334332221111111 1111100 0 12 22222223344444433332 233322
Q ss_pred -CCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcc
Q 012185 394 -SGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKL 453 (469)
Q Consensus 394 -~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~v 453 (469)
-.|..|.+.|=.=..-.++-.+++.+.|.+.+.. +...|+++++++++-.++.++.-
T Consensus 131 r~sr~~~feYG~~R~wGSig~ai~s~~~G~L~~i~---p~~~fwi~s~~~~il~lll~~~~ 188 (412)
T PF01306_consen 131 RVSRRNGFEYGRARMWGSIGFAIASLLAGILFNIN---PNIIFWIASAAAIILLLLLLLLK 188 (412)
T ss_dssp HHHHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHSS-
T ss_pred HHHHHhcCCcchHHHHhhHHHHHHHHHhheeeeeC---ccHHHHHHHHHHHHHHHHHHHcC
Confidence 1256788888889999999999999999888642 23568888877776666444443
No 232
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=96.23 E-value=0.034 Score=58.59 Aligned_cols=144 Identities=16% Similarity=0.221 Sum_probs=83.8
Q ss_pred HHHHHHHhHHHhhhh----cCchHHHHH-HHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccc
Q 012185 301 VLGVSSFLIEPMCRW----IGSRLVWAI-SNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFP 375 (469)
Q Consensus 301 v~~i~s~i~~~l~~~----ig~r~l~~~-s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~ 375 (469)
.-++.--+++.++|| +||+|.|+. +.+.+++....+.... +.+... ...-+++...++++.
T Consensus 60 iDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p-----~~~~~~---------k~~ya~vtY~l~~l~ 125 (467)
T COG2211 60 IDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITP-----DFSMTG---------KLIYALVTYMLLGLG 125 (467)
T ss_pred HHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCC-----CcccCc---------chHHHHHHHHHHHHH
Confidence 344444556666664 688898885 7677766433222221 100001 133345555567888
Q ss_pred hhhhccccc-hhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCcc--chHHHHHHHHHHHHHHHhhhc
Q 012185 376 LAITYSVPF-AITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGN--IPAFVLASLSALAGGVVATLK 452 (469)
Q Consensus 376 ~a~~~~vP~-aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~--~~~f~~~~v~~liaai~~~~~ 452 (469)
+. ..-+|| +|.+|..++. +.+-.-.+.=..+..+++++++...+++++.+|+++ ...+..+.++++++.+..++-
T Consensus 126 YT-~vniPy~al~~~iT~d~-~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~ 203 (467)
T COG2211 126 YT-LVNIPYGALGPEITQDP-QERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFC 203 (467)
T ss_pred HH-heeCchhhcchhhcCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHH
Confidence 87 566787 6667777654 345555666677777888888888888888777553 233555555555555444333
Q ss_pred ccCCCCCC
Q 012185 453 LPHLSSNS 460 (469)
Q Consensus 453 vpet~g~~ 460 (469)
+..+|+|-
T Consensus 204 ~~~v~ER~ 211 (467)
T COG2211 204 FFNVKERV 211 (467)
T ss_pred HHHhhccc
Confidence 33344433
No 233
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=95.89 E-value=0.074 Score=55.57 Aligned_cols=88 Identities=15% Similarity=0.183 Sum_probs=56.2
Q ss_pred HHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhcc
Q 012185 302 LGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYS 381 (469)
Q Consensus 302 ~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~ 381 (469)
.++--+..+++.||+|||++|...++++.+|-+++++-.. . ++|..-...+.+.=.++|++.|-=+-
T Consensus 97 ti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~---------~----~~~~~~m~~L~~~R~~LGiGIGGDYP 163 (538)
T KOG0252|consen 97 TIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVG---------T----TSPLGVMMTLCFFRFLLGIGIGGDYP 163 (538)
T ss_pred HHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCC---------C----CCCcchhhHHHHHHHHhhccccCCCc
Confidence 4455678899999999999999999988887653332211 0 11111122233344558888887666
Q ss_pred ccchhhhccccCCCCCccchhhH
Q 012185 382 VPFAITAELTADSGGGQGLAIGV 404 (469)
Q Consensus 382 vP~aLise~~p~~~~~~G~~~gi 404 (469)
..-+++||+-..+ .+|+.++.
T Consensus 164 lSAtI~SE~an~~--~RGa~iaa 184 (538)
T KOG0252|consen 164 LSATIMSESANKK--TRGAFIAA 184 (538)
T ss_pred chHHHhhhhhhhc--cccceeEE
Confidence 6667899998776 44544433
No 234
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=95.87 E-value=0.039 Score=59.27 Aligned_cols=138 Identities=15% Similarity=0.114 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
|-.-+...+..++.-+...+.||+|.|.+-+.|.++.+++++...+.+.. +...+..-...
T Consensus 85 ~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i-------------------~~l~lt~gvi~ 145 (509)
T KOG2504|consen 85 WIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSL-------------------WQLYLTFGVIG 145 (509)
T ss_pred HHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhH-------------------HHHHHHHHHHh
Confidence 33333444566666677788999999999999999999999888877631 22233333446
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhc
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLK 452 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~ 452 (469)
|++.+..+.--..+++.|+++ +++...|+..+-.-+..++-+...-.+++..|-. ..+..-+..++-.+++....
T Consensus 146 G~G~~~~~~paiviv~~YF~k---kR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r--~~~l~~~~~~l~~~~~~~~~ 220 (509)
T KOG2504|consen 146 GLGLGLIYLPAVVILGTYFEK---KRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWR--GALLIFGGISLNVLVAGALL 220 (509)
T ss_pred hccchhhhcchhhhhhhHhHH---HHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcH--HHHHHHHHHHHHHHHHHHHc
Confidence 666664444444677888875 4787888888887777777666666666666633 34444444444444434444
Q ss_pred cc
Q 012185 453 LP 454 (469)
Q Consensus 453 vp 454 (469)
-|
T Consensus 221 rp 222 (509)
T KOG2504|consen 221 RP 222 (509)
T ss_pred CC
Confidence 44
No 235
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=95.79 E-value=0.96 Score=47.97 Aligned_cols=32 Identities=16% Similarity=0.223 Sum_probs=20.5
Q ss_pred HHHHhcCCCccchhhHHHHHHHHHHhhhHHhhcccc
Q 012185 68 RALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGA 103 (469)
Q Consensus 68 rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~ 103 (469)
...-.-+..+|..+.|...+ .+|.-+||.++.
T Consensus 140 DGWALT~Ls~~n~~~ASTcq----tvG~~~Gyfls~ 171 (544)
T PF13000_consen 140 DGWALTMLSPENVGYASTCQ----TVGQTAGYFLSF 171 (544)
T ss_pred ehhhhhhcChhhcchHHHHH----HhHhhhhHHHHH
Confidence 34445566788888887777 556666665553
No 236
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=95.24 E-value=0.14 Score=54.31 Aligned_cols=88 Identities=14% Similarity=0.001 Sum_probs=56.4
Q ss_pred HHHHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHH
Q 012185 367 VVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGG 446 (469)
Q Consensus 367 ~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaa 446 (469)
+++.+.+++.+.....-=+++.|..+++++..+......-.+..+..++.+.+.|.+.+..+ ...+|.+.++..++.
T Consensus 125 ~~~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~--~~~~f~~~a~l~ll~- 201 (468)
T TIGR00788 125 AFIFLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTL--TRILFLITAALLLLQ- 201 (468)
T ss_pred HHHHHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcC--cchHHHHHHHHHHHH-
Confidence 35556677777776666688889888433223333333333345677777777777776655 235777777777766
Q ss_pred HHhhhcccCCC
Q 012185 447 VVATLKLPHLS 457 (469)
Q Consensus 447 i~~~~~vpet~ 457 (469)
++...++||.+
T Consensus 202 ~~~~~~~~E~~ 212 (468)
T TIGR00788 202 LFVSNLSKERR 212 (468)
T ss_pred HHHHHhccccc
Confidence 44677889975
No 237
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=94.56 E-value=1.2 Score=46.26 Aligned_cols=59 Identities=12% Similarity=0.124 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccc
Q 012185 361 IKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAG 421 (469)
Q Consensus 361 ~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g 421 (469)
+.+..++++..-|+.=|..+.--|..++|..|++ ++...||+..++..+.-.+++++.-
T Consensus 334 si~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~--~REFslg~vsvsds~GI~lAgll~l 392 (402)
T PF02487_consen 334 SIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPE--DREFSLGAVSVSDSLGILLAGLLGL 392 (402)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHH--HHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 3566777777788888888888889999988776 5566699999998888877776543
No 238
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=94.53 E-value=0.53 Score=50.19 Aligned_cols=155 Identities=15% Similarity=0.072 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHH-HHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHH
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVF-ACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTL 371 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~a-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (469)
+...+..++.++.+-+++.++|+-++||.+.....+.+ ++.+.+.++. . +. .+...++..+
T Consensus 74 ~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~----~------------~~--~~~~~~l~ii 135 (477)
T PF11700_consen 74 YANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVS----P------------GQ--WWLALVLFII 135 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhC----c------------ch--HHHHHHHHHH
Confidence 33444555666667778889999988887776444333 3333333332 1 11 2333333333
Q ss_pred hccchhhhccccchhhhccccCCC----------------------------CCccchhhHHHHHHHHHHHHHhhccccc
Q 012185 372 LGFPLAITYSVPFAITAELTADSG----------------------------GGQGLAIGVLNLAIVIPQMIVSLGAGPW 423 (469)
Q Consensus 372 ~Gi~~a~~~~vP~aLise~~p~~~----------------------------~~~G~~~gi~n~~i~l~Qil~s~~~g~l 423 (469)
.-+++......=-+++.|..+++. |-.|...++-++...+++++.-...-..
T Consensus 136 a~v~~~~~~vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~ 215 (477)
T PF11700_consen 136 ANVGYEASNVFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISP 215 (477)
T ss_pred HHHHHHHHHHHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 334444333332356666554431 2234445555555555555433211111
Q ss_pred eec--ccCccchHHHHHHHHHHHHHHHhhhcccCCCCCCccCCC
Q 012185 424 DAL--FGGGNIPAFVLASLSALAGGVVATLKLPHLSSNSFRSSG 465 (469)
Q Consensus 424 ~~~--~g~~~~~~f~~~~v~~liaai~~~~~vpet~g~~~~~~~ 465 (469)
-+. -......++.+.|+.-++-++-..+++||.++.....++
T Consensus 216 ~~~~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~ 259 (477)
T PF11700_consen 216 GSTASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSG 259 (477)
T ss_pred CCccccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcc
Confidence 111 001124567788888777777777889998874443333
No 239
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=94.12 E-value=0.75 Score=47.47 Aligned_cols=144 Identities=12% Similarity=0.003 Sum_probs=86.5
Q ss_pred HHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhc
Q 012185 301 VLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITY 380 (469)
Q Consensus 301 v~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~ 380 (469)
...+.++..+++.||+|.|+-.+.|..+++++.....=.... ......++..-..|.+.+...
T Consensus 60 gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~-----------------~~y~~FL~~lFila~Gi~~Le 122 (422)
T COG0738 60 GYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASS-----------------KSYGFFLVALFILASGIGLLE 122 (422)
T ss_pred HHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhh-----------------hhHHHHHHHHHHHHhhhHHHH
Confidence 567788999999999999999999999998865433211110 023334443344455555544
Q ss_pred cccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceec--------------cc---CccchH-HHHHHHHH
Q 012185 381 SVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDAL--------------FG---GGNIPA-FVLASLSA 442 (469)
Q Consensus 381 ~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~--------------~g---~~~~~~-f~~~~v~~ 442 (469)
+--=.+++..-+++ ....-|.+...+.-+.+++.+++.+.++.. .+ ...... ..+++++.
T Consensus 123 taaNp~v~~lg~~~--~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lv 200 (422)
T COG0738 123 TAANPYVTLLGKPE--SAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLV 200 (422)
T ss_pred hccchHHHHhCCch--hHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 44334566666553 334447777778888888877766654431 00 001122 34455566
Q ss_pred HHHHHHhhhcccCCCCCCccC
Q 012185 443 LAGGVVATLKLPHLSSNSFRS 463 (469)
Q Consensus 443 liaai~~~~~vpet~g~~~~~ 463 (469)
+++......+.|+.+....+.
T Consensus 201 ll~v~~~~~k~p~~~~~~~~~ 221 (422)
T COG0738 201 LLAVLILLSKLPDLQVAAPSL 221 (422)
T ss_pred HHHHHHHhccCCcCCcccccc
Confidence 666666667788877665543
No 240
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=93.90 E-value=0.37 Score=49.76 Aligned_cols=115 Identities=10% Similarity=0.106 Sum_probs=82.2
Q ss_pred HhHHHhhhhcC-----chHHHHH-HHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhc
Q 012185 307 FLIEPMCRWIG-----SRLVWAI-SNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITY 380 (469)
Q Consensus 307 ~i~~~l~~~ig-----~r~l~~~-s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~ 380 (469)
...+..+|+.+ ||..|+. |.+.++.+...+.+......+... ....+.+.....+.+.+.++|++.....
T Consensus 32 ~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~----~~~~~~~~g~~~a~l~F~l~G~G~~~s~ 107 (403)
T PF03209_consen 32 VWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQ----QSSGPFWLGLALAALAFLLYGLGVHASG 107 (403)
T ss_pred HHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccc----ccccccHHHHHHHHHHHHHHHhhHhHhH
Confidence 44567789888 8999986 777777666655554433211000 0011233445567778888999999888
Q ss_pred cccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecc
Q 012185 381 SVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALF 427 (469)
Q Consensus 381 ~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~ 427 (469)
+-=.+|+++..|++ ++++..++.-+..-+.-++.+.+.|.+++-+
T Consensus 108 T~~lALl~D~~~e~--~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~ 152 (403)
T PF03209_consen 108 TSFLALLADLAPEE--RRPRVVAIVWVMLIVGIIVSAIVFGRLLDPF 152 (403)
T ss_pred HHHHHHHHhcCCHh--hhhhhHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 88889999999987 6778899999999999888888888777644
No 241
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=93.72 E-value=1.8 Score=45.88 Aligned_cols=108 Identities=13% Similarity=0.108 Sum_probs=71.6
Q ss_pred eehhHHHHHHHHHhhcchhhHhhhcCCCcccccccCCCccchhhHHHHHHHHHhccccccchhHHHHHhcCCCccc--hh
Q 012185 4 KVRKKTAIYSCRMSDDFCCYIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQ--RN 81 (469)
Q Consensus 4 i~~g~~~~~i~llll~~~~~i~~~l~d~~~~~~~~~~~~~~~i~~~v~g~~llD~a~n~~~~p~rAli~D~~p~~q--r~ 81 (469)
|+.|+++.++|-++++.+... +.....++..+.-++....=+-.-.++.|+.|++| |+
T Consensus 95 I~lGail~~iGh~~L~~~~~~--------------------~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD 154 (498)
T COG3104 95 IVLGAILMAIGHLVLAISSVS--------------------GPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRD 154 (498)
T ss_pred HHHHHHHHHHHHHHHhccccc--------------------cccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccC
Confidence 345666666666666655400 01123345555556677777778899999999755 68
Q ss_pred hHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHHhhheeE
Q 012185 82 SANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIY 146 (469)
Q Consensus 82 ~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~~~it~~ 146 (469)
.+++++=+-.++|++++-++... +.. ...|+..|.++++-+.+.+++..+
T Consensus 155 ~gFt~fY~~iNiGsl~~p~i~~~--~~~-------------~~g~~~gF~~aavGm~~gl~~f~~ 204 (498)
T COG3104 155 GGFTLFYMGINIGSLIAPIITGL--LAI-------------NYGWHVGFGLAAVGMIIGLVIFLL 204 (498)
T ss_pred CCccEEEEEeehHHHHHHHHHHH--HHH-------------hhCHHHHHHHHHHHHHHHHHHHHH
Confidence 89988888888888887766543 111 124788899999888887776543
No 242
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=92.31 E-value=7 Score=43.48 Aligned_cols=94 Identities=16% Similarity=0.131 Sum_probs=65.0
Q ss_pred chhhHHHHHHHHHhccccccchhHHHHHhcCCCccc---hhhHHHHHHHHHHhhhHHhhccccccchhh-hhhcccchhh
Q 012185 44 RAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQ---RNSANAIFCSWMAVGNILGFSAGASGSWHR-WFPFLTSRAC 119 (469)
Q Consensus 44 ~~i~~~v~g~~llD~a~n~~~~p~rAli~D~~p~~q---r~~a~~~~~~~~glG~ilgyl~g~~~~w~~-~~~~~~~~~~ 119 (469)
+...+..+|+.+.-++...+-...-++..|..+++| +.+.+.|+-..+++|++++..+-..+ .+ ...+
T Consensus 83 ~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l--~~~~~~f------ 154 (654)
T TIGR00926 83 LHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPIL--RGDVGCF------ 154 (654)
T ss_pred hHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhhccc------
Confidence 344556789999999999999999999999998654 56777777778888888776444321 10 0000
Q ss_pred hcccchhHHHHHHHHHHHHHHhhheeE
Q 012185 120 CAACGNLKAAFLVAVVFLTLCALVTIY 146 (469)
Q Consensus 120 ~~~~~~~~~~f~i~~i~~~i~~~it~~ 146 (469)
+. -..|...|.++++.+++++++...
T Consensus 155 g~-~~~~~~aF~i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 155 GC-QDCYPLAFGVPAILMILALIVFMA 180 (654)
T ss_pred cc-CcchHHHHHHHHHHHHHHHHHHHH
Confidence 00 013778899999888877766543
No 243
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=92.00 E-value=0.62 Score=48.99 Aligned_cols=82 Identities=21% Similarity=0.179 Sum_probs=57.2
Q ss_pred hccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhh
Q 012185 372 LGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATL 451 (469)
Q Consensus 372 ~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~ 451 (469)
..++.+....+-=+++.|....+.+.+|.-.+....+..+..++.+...|++.+..+. ...|.+++.+.++..+.+..
T Consensus 96 a~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~--~~~f~i~~~~~~l~~~~~~~ 173 (433)
T PF03092_consen 96 ASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGP--QGVFLISAALPLLMLIVALF 173 (433)
T ss_pred HHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCC--eEEehHHHHHHHHHHHHHHH
Confidence 3444444455545677777765544466667777777788888888888888877653 36788888888888776666
Q ss_pred cccC
Q 012185 452 KLPH 455 (469)
Q Consensus 452 ~vpe 455 (469)
..+|
T Consensus 174 ~~~e 177 (433)
T PF03092_consen 174 LLEE 177 (433)
T ss_pred hhhh
Confidence 6666
No 244
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=91.72 E-value=0.59 Score=47.85 Aligned_cols=114 Identities=12% Similarity=0.050 Sum_probs=81.4
Q ss_pred eehhHHHHHHHHHhhcchhhHhhhcCCCcccccccCCCccchhhHHHHHHHHHhccccccchhHHHHHhcCCCcc---ch
Q 012185 4 KVRKKTAIYSCRMSDDFCCYIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPD---QR 80 (469)
Q Consensus 4 i~~g~~~~~i~llll~~~~~i~~~l~d~~~~~~~~~~~~~~~i~~~v~g~~llD~a~n~~~~p~rAli~D~~p~~---qr 80 (469)
|+.|+++.++|.+++..+..-.. .++.....+..+|+.++-++....-.-..+++.|..+++ +|
T Consensus 4 I~~g~~~~~~G~~ll~l~~~~~~-------------~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~ 70 (372)
T PF00854_consen 4 ILLGSIVYLLGHVLLTLSAIPPS-------------LPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRR 70 (372)
T ss_dssp HHHHHHHHHHHHHH--HHHTSSS-------------C------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHH
T ss_pred hhHHHHHHHHHHHHhHHHHhcch-------------hhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhh
Confidence 56788888888888776542211 123345667888999999999999999999999999875 46
Q ss_pred hhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHHhhhee
Q 012185 81 NSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTI 145 (469)
Q Consensus 81 ~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~~~it~ 145 (469)
++.++|+=...++|..+++....+. ++ ...|.+.|.++.+.+++++++.+
T Consensus 71 ~~~F~~fY~~in~G~~~~~~~~~~i--~~-------------~~~~~~~f~i~~~~~~~~~~~f~ 120 (372)
T PF00854_consen 71 DSFFNWFYWGINIGSLFSPTLVPYI--QQ-------------NYGWFLGFGIPAIGMLLALIVFL 120 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCHH--HH-------------CS-HHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHhhhhHhhcccchhh--cc-------------ccchhhhhhHHHHHHHHHHHHHH
Confidence 7899999999999999998776642 11 12567789999988877776543
No 245
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=91.50 E-value=2.1 Score=44.85 Aligned_cols=129 Identities=12% Similarity=0.112 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHH
Q 012185 246 VMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAIS 325 (469)
Q Consensus 246 ~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s 325 (469)
++-++|+.|-+..-|...|.| + . ...-|-.++|-++++...+..-++.|+.|.|....++
T Consensus 56 SN~~qWI~ya~i~n~~~~~Yg------s-----------~---~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llg 115 (480)
T KOG2563|consen 56 SNGMQWIQYAPINNYVNSFYG------S-----------S---SAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLG 115 (480)
T ss_pred cCcchheeehhHHHHHHHHhc------c-----------h---HHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHH
Confidence 445789998888888877543 2 1 2234778889999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCCccchhhHH
Q 012185 326 NFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVL 405 (469)
Q Consensus 326 ~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~ 405 (469)
..+.+++-.. =.+.+.. .+. +..-.......-.+.+.+..-++.+|--+-+-.+|.++|......|++
T Consensus 116 t~ln~iGa~I-r~iss~p------~v~-----~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~ 183 (480)
T KOG2563|consen 116 TVLNGIGAWI-RLISSLP------FVP-----PLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVM 183 (480)
T ss_pred HHHHHHHHHH-hhhccCc------ccc-----ccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHh
Confidence 8777664321 1122110 010 100112455666677888888889998888888988766666555555
Q ss_pred H
Q 012185 406 N 406 (469)
Q Consensus 406 n 406 (469)
.
T Consensus 184 ~ 184 (480)
T KOG2563|consen 184 G 184 (480)
T ss_pred c
Confidence 4
No 246
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=91.27 E-value=5.5 Score=40.59 Aligned_cols=148 Identities=12% Similarity=0.044 Sum_probs=78.1
Q ss_pred hhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchH--HHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCc
Q 012185 281 VKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRL--VWAISNFIVFACMATTAIISVISVREYSGGIEHGIGAN 358 (469)
Q Consensus 281 ~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~--l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (469)
...||-++.. +.....++.++..+.+--+..|.. +..++.+..| +..+.... .
T Consensus 269 ~~vyNG~veA------v~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~a----gllf~m~~--t------------- 323 (433)
T KOG3810|consen 269 ANVYNGAVEA------VSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQA----GLLFIMAQ--T------------- 323 (433)
T ss_pred hhhhcCHHHH------HHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhh----hhhhhhhc--c-------------
Confidence 4567655542 223455677777777754444442 2333433333 22333211 1
Q ss_pred hhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceeccc--Cc------
Q 012185 359 QAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFG--GG------ 430 (469)
Q Consensus 359 ~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g--~~------ 430 (469)
.+.+...+...+++..+.-+.+|--+-+++-+.++ ..|...|+-+...-+=|-+.. -.+++..| -+
T Consensus 324 -~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e--~~gLvFGiNTFvAl~lQsilT---~iVvd~~g~~L~ir~Q~~ 397 (433)
T KOG3810|consen 324 -QHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSE--LFGLVFGINTFVALILQSILT---LIVVDDRGLGLDIRTQFV 397 (433)
T ss_pred -cceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhh--hheeeeehHHHHHHHHHHhhe---EEEEcccccCCCcceeEE
Confidence 02556667777777777777777655666666554 789999986555555554444 33344222 11
Q ss_pred -cchHHHHHHHHHHHHHHHhhhcccCCCCCCc
Q 012185 431 -NIPAFVLASLSALAGGVVATLKLPHLSSNSF 461 (469)
Q Consensus 431 -~~~~f~~~~v~~liaai~~~~~vpet~g~~~ 461 (469)
...-|.+-|+..++++...+. .+.|++..
T Consensus 398 ~Y~~Yf~v~~~i~~~~~~~~~~--~~~~~~~~ 427 (433)
T KOG3810|consen 398 VYSSYFIVLGVIFLIGFGIEYL--MCRRNKVP 427 (433)
T ss_pred EEeehHHHHHHHHHHHHHHHHH--HhhcCCCC
Confidence 112366667777777653333 34444443
No 247
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=90.78 E-value=2.4 Score=44.73 Aligned_cols=113 Identities=8% Similarity=0.074 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
+-.+...+.+++..+....+..|+..|.=...++++..+..+.+..+... + . +.+...+..++.+.+.
T Consensus 49 ~~~~~~~v~~l~~~~~~~~~~~~i~~~~Ri~~~lv~~~~~~~~~~~l~~~--~-----~-----~~~~~f~~~~~~v~~~ 116 (437)
T TIGR00939 49 YYTLASQLPSLLFNSLNLFLIFRIPVTVRLLGGLVILLVVVILVMVLVKV--Q-----T-----SETGFFVTTMASVVII 116 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCccchhHHHHHHHHHHHHHHhheeee--c-----C-----CcchHHHHHHHHHHHH
Confidence 33344445556666666777777765322334444333333333322110 0 0 0122355566777778
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHh
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVS 417 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s 417 (469)
|++-+....--|++.+..-|+-....-...|+.-+...+.|++.-
T Consensus 117 g~~~~~~q~s~~gla~~fp~~~~~a~~~G~g~aGv~~s~~~ii~~ 161 (437)
T TIGR00939 117 NSGMALLQGSLFGLAGVFPSTYSSAVMSGQGLAGVLTSLAMILVK 161 (437)
T ss_pred HhhhhhhcccchhhcccCCHHHHHHHHhcchhHHHHHHHHHHHHH
Confidence 888888888878887754432111111124444455555566644
No 248
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=90.55 E-value=6.1 Score=40.79 Aligned_cols=78 Identities=14% Similarity=0.122 Sum_probs=47.4
Q ss_pred HHHHhhcchhhHhhhcCCCcccccccCCCccchhhHHHHHHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHH
Q 012185 13 SCRMSDDFCCYIGYILGDTKEHCSKFRGTRTRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMA 92 (469)
Q Consensus 13 i~llll~~~~~i~~~l~d~~~~~~~~~~~~~~~i~~~v~g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~g 92 (469)
+|+.++..+-.+-.++|++. ..|-. .+....+.+++|-.-+-.-.....-.-+..+|+-+-|+..+ .
T Consensus 109 lG~~mllLs~~v~~~~g~ng--------~~p~v-~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q----~ 175 (510)
T KOG3574|consen 109 LGLFMLLLSYLVDRGLGGNG--------GLPNV-VALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQ----S 175 (510)
T ss_pred HHHHHHHHhhCCCcccccCC--------CCcch-HHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHH----H
Confidence 34444444445555555432 12222 23444556677766666666778888889999999999888 5
Q ss_pred hhhHHhhcccc
Q 012185 93 VGNILGFSAGA 103 (469)
Q Consensus 93 lG~ilgyl~g~ 103 (469)
+|.-+||.+|.
T Consensus 176 Vg~~~GyfL~~ 186 (510)
T KOG3574|consen 176 VGQTAGYFLGN 186 (510)
T ss_pred HHHhhhHHhhc
Confidence 55555555554
No 249
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=90.44 E-value=0.89 Score=42.79 Aligned_cols=112 Identities=21% Similarity=0.178 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHh
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLL 372 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (469)
+....+.+...+.+.+.+++.||.|||+.+..+...+.++.....+... ......++.....
T Consensus 43 ~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~ 104 (338)
T COG0477 43 LLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPN------------------VGLALLLILRLLQ 104 (338)
T ss_pred HHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCcc------------------chHHHHHHHHHHH
Confidence 4444555566666688999999999998888877654443222222221 0133334444447
Q ss_pred ccchhhhccccchhhhccccCCCCCccchhhHHHH-HHHHHHHHHhhccccc
Q 012185 373 GFPLAITYSVPFAITAELTADSGGGQGLAIGVLNL-AIVIPQMIVSLGAGPW 423 (469)
Q Consensus 373 Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~-~i~l~Qil~s~~~g~l 423 (469)
|+..+.......++++|..|. .+.++...+.... ...++.++.+...+.+
T Consensus 105 g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (338)
T COG0477 105 GLGGGGLLPVASALLSEWFPE-ATERGLAVGLVTLGAGALGLALGPLLAGLL 155 (338)
T ss_pred HhhhHHHHHHHHHHHHHhcCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888888899999986 1146777777777 4666666666444443
No 250
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=90.33 E-value=2 Score=44.16 Aligned_cols=127 Identities=19% Similarity=0.040 Sum_probs=79.2
Q ss_pred HHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccc
Q 012185 303 GVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSV 382 (469)
Q Consensus 303 ~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~v 382 (469)
.+.+..-+.+.|++|||+.+.+..+... ..+++.-+. | +....+++-++.|.+.|. ..+
T Consensus 127 llga~~w~l~~d~~grr~~f~~T~l~t~----v~~~is~~s--------------p--nf~~L~~f~~l~~~g~gg-~pv 185 (528)
T KOG0253|consen 127 LVGAMVWGLSADTIGRRKGFNLTFLVTG----VFGVISGAS--------------P--NFASLCVFRALWGFGVGG-LPV 185 (528)
T ss_pred hhhhhhhheehhhhhcchhhhhhHHHHH----HHHHhhcCC--------------C--CeehhhHHHHHHhccCCC-ccH
Confidence 3445666778999999998877554432 233443211 1 345566777778888887 566
Q ss_pred cchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHHhhhcccCC
Q 012185 383 PFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVVATLKLPHL 456 (469)
Q Consensus 383 P~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpet 456 (469)
.-++=.|..|.. ++++-+=+. .+-.+.|+...++.=.+...+| ..+.+...++-..+.++ ..+++||.
T Consensus 186 ~~~~yle~lp~~--~r~~~~V~~-~~waig~v~ea~law~vm~~~g--wr~~l~~~~~pl~~~a~-f~~w~~ES 253 (528)
T KOG0253|consen 186 DSAIYLEFLPSS--HRWLLTVMS-FFWAIGQVFEALLAWGVMSNFG--WRYLLFTSSTPLMFAAR-FLVWVYES 253 (528)
T ss_pred hHHHHHHhccCc--CCCcchhHH-HHHHHHHHHHHHHHHHHHHhhh--HHHHHHHHHhHHHHHHH-HHhhcccC
Confidence 667888999987 344434333 6666677776655544444555 34566666677777777 44567764
No 251
>PF12832 MFS_1_like: MFS_1 like family
Probab=88.84 E-value=2.6 Score=32.98 Aligned_cols=69 Identities=9% Similarity=0.012 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHH
Q 012185 242 VVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLV 321 (469)
Q Consensus 242 ~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l 321 (469)
.+....|+-+.+.-++.-|.+-|..+.-++ ..+-|+ ...+..++..+++.+.+.++||.++++.
T Consensus 4 ~lk~~yf~~f~~~g~~~Pfl~~~~~~~Gl~-----------~~~iGi-----l~~i~~~~~~~~~pl~g~laDk~~~~~~ 67 (77)
T PF12832_consen 4 PLKAFYFFYFAALGCLYPFLPLYLKQLGLS-----------PSQIGI-----LSAIRPLIRFLAPPLWGFLADKFGKRKV 67 (77)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHhhhhcCCC-----------HHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHCccHH
Confidence 344555556666677777888776652222 112232 2334556788889999999999999887
Q ss_pred HHHHH
Q 012185 322 WAISN 326 (469)
Q Consensus 322 ~~~s~ 326 (469)
.....
T Consensus 68 ~l~~~ 72 (77)
T PF12832_consen 68 ILLGS 72 (77)
T ss_pred HHHHH
Confidence 66543
No 252
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=88.59 E-value=6.5 Score=38.19 Aligned_cols=104 Identities=12% Similarity=0.036 Sum_probs=64.3
Q ss_pred HHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccc
Q 012185 305 SSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPF 384 (469)
Q Consensus 305 ~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~ 384 (469)
.+++.+.+.|+.|.+.+..+|.+...+++..+..... ++ ++++ ..+...+++.+.|.+.+-.++.-.
T Consensus 52 ~G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~----~~-------i~~~--~~~~~~~~~~l~~~s~~~~~ta~l 118 (250)
T PF06813_consen 52 FGILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVS----GR-------IPSL--PVWLMCLFLFLGGNSSCWFNTASL 118 (250)
T ss_pred ccHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHh----Cc-------cCcc--chHHHHHHHHHHcccHHHhhhHHH
Confidence 3677899999999999999988888788776655431 11 1111 133333444444444333334322
Q ss_pred hhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccce
Q 012185 385 AITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWD 424 (469)
Q Consensus 385 aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~ 424 (469)
....+-+|+ .+|+..|+.-.+.-+.-.+-+.+.-.+.
T Consensus 119 vt~~~NFP~---~RG~vvgilk~~~GLSaai~t~i~~~~f 155 (250)
T PF06813_consen 119 VTCVRNFPR---SRGTVVGILKGFFGLSAAIFTQIYSAFF 155 (250)
T ss_pred HHHHHhCcc---ccCceehhhhHHHHhHHHHHHHHHHHHc
Confidence 233355664 5799999999998888777666554444
No 253
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=88.51 E-value=18 Score=38.60 Aligned_cols=53 Identities=15% Similarity=0.128 Sum_probs=41.9
Q ss_pred HHHHHHHHhccccccch-hHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhcc
Q 012185 49 FVIGFWLLDLANNTVQG-PARALLADLSGPDQRNSANAIFCSWMAVGNILGFSA 101 (469)
Q Consensus 49 ~v~g~~llD~a~n~~~~-p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~ 101 (469)
..+-++...+-.+.+-+ -.-++..|++.++|-.|-++..+...++|.++|-.+
T Consensus 131 ~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~ 184 (472)
T TIGR00769 131 FALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRT 184 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33445556676777776 789999999999999999999988888888886533
No 254
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=84.79 E-value=29 Score=36.27 Aligned_cols=146 Identities=14% Similarity=0.077 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHH-HHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhcc
Q 012185 296 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFA-CMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGF 374 (469)
Q Consensus 296 ~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi 374 (469)
.+..+..++-+-+++.++|+-|+||-++......++ +++++.++. + .-.++..+++.++..+
T Consensus 65 aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~----~-------------~s~~~~~l~~~il~~i 127 (438)
T COG2270 65 AIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIP----P-------------GSYLLLLLLFLILASI 127 (438)
T ss_pred HHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhC----C-------------CchHHHHHHHHHHHHH
Confidence 344556666777889999999998887764444433 333334333 1 0136666677777777
Q ss_pred chhhhccccchhhhccccCC--CCCccchhhHHHHHHHHHHHHH--hhcc----cc---ce---ecccCccchHHHHHHH
Q 012185 375 PLAITYSVPFAITAELTADS--GGGQGLAIGVLNLAIVIPQMIV--SLGA----GP---WD---ALFGGGNIPAFVLASL 440 (469)
Q Consensus 375 ~~a~~~~vP~aLise~~p~~--~~~~G~~~gi~n~~i~l~Qil~--s~~~----g~---l~---~~~g~~~~~~f~~~~v 440 (469)
++...+..=-+++.+..+++ +|..|..-+.-+.-..++-+.+ .... +. ++ ++.+.+..-++.++++
T Consensus 128 ~~~~s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~ 207 (438)
T COG2270 128 GFEFSNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAAL 207 (438)
T ss_pred hcchhheehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHH
Confidence 77755555557888887764 1222222222222222332221 1111 11 11 1233333456777777
Q ss_pred HHHHHHHHhhhcccCCCC
Q 012185 441 SALAGGVVATLKLPHLSS 458 (469)
Q Consensus 441 ~~liaai~~~~~vpet~g 458 (469)
--++-++=.++.+|+...
T Consensus 208 W~li~~iPm~~~v~~~~~ 225 (438)
T COG2270 208 WWLLFALPMILNVHDAEK 225 (438)
T ss_pred HHHHHHhHHHhccccccc
Confidence 777777767778887663
No 255
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=83.19 E-value=14 Score=41.20 Aligned_cols=137 Identities=8% Similarity=-0.001 Sum_probs=77.5
Q ss_pred HHHHHHHHHHhHHHhhhh-cCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccch
Q 012185 298 NSVVLGVSSFLIEPMCRW-IGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPL 376 (469)
Q Consensus 298 ~~iv~~i~s~i~~~l~~~-ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~ 376 (469)
+...+.+..++.+.+.|+ +|+++...++.+++.++++.+.+... ... . ........++.+++..++.
T Consensus 32 f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~-~~~-----~------~~~~~~~~l~gLaLia~G~ 99 (654)
T TIGR00926 32 FTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAI-PSS-----G------HPLHDLLDLLGLALIALGT 99 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccC-ccc-----c------cchHHHHHHHHHHHHHhhc
Confidence 334556677788888876 59999888888888877765554221 000 0 0012333555666667777
Q ss_pred hhhccccchhhhccccCCCCCccchhhHHHHHHHHHH---HHHhhccccceecc---cC--ccchHHHHHHHHHHHHHHH
Q 012185 377 AITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQ---MIVSLGAGPWDALF---GG--GNIPAFVLASLSALAGGVV 448 (469)
Q Consensus 377 a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Q---il~s~~~g~l~~~~---g~--~~~~~f~~~~v~~liaai~ 448 (469)
+..-...-++.++.+++++ .-.-...+|.+++.-+ +++..+.+.+.+.. |. .....|.+.+++++++.+.
T Consensus 100 GgiKp~vsaf~gdqf~~~~--~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lv 177 (654)
T TIGR00926 100 GGIKPCVSAFGGDQFEERQ--LSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIV 177 (654)
T ss_pred cccccCchhhhHhhcCccc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHH
Confidence 7777777778888876532 2223444555544444 44444444443222 10 1234577777777766653
No 256
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=83.12 E-value=12 Score=40.03 Aligned_cols=146 Identities=13% Similarity=0.053 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHHHhHHHhhhhcCc-hHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHH
Q 012185 293 FGLLLNSVVLGVSSFLIEPMCRWIGS-RLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTL 371 (469)
Q Consensus 293 ~~l~i~~iv~~i~s~i~~~l~~~ig~-r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (469)
|....+++..++.+.+.+....|.+. |+.+++|.++..++-+.-..+...+ ...++..++.=.+
T Consensus 75 ~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~---------------~~~~y~mL~~R~l 139 (488)
T KOG2325|consen 75 LVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVP---------------NGVKYLMLVARIL 139 (488)
T ss_pred HHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcc---------------cchHHHHHHHHHH
Confidence 44445888889999999988888774 6777788877777655443333221 1147778888888
Q ss_pred hccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhc---cccce-e---ccc----CccchHHHHHHH
Q 012185 372 LGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLG---AGPWD-A---LFG----GGNIPAFVLASL 440 (469)
Q Consensus 372 ~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~---~g~l~-~---~~g----~~~~~~f~~~~v 440 (469)
.|++.+.. ++--+.++...-.+ ++-+.++..+....+++++-+.+ ++++- + ... +.++..-++.++
T Consensus 140 ~Gvg~~n~-a~lR~Y~a~~s~~~--dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i 216 (488)
T KOG2325|consen 140 TGVGVGNF-AVLRAYIADASTVE--DRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAI 216 (488)
T ss_pred cCcCcccH-HHHHHHHHhccCcc--chHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHH
Confidence 99987743 33233444433233 34444777777667777664321 22221 1 111 012344566777
Q ss_pred HHHHHHHHhhhcccCC
Q 012185 441 SALAGGVVATLKLPHL 456 (469)
Q Consensus 441 ~~liaai~~~~~vpet 456 (469)
..++..++.....+|.
T Consensus 217 ~~i~~~v~i~~~f~E~ 232 (488)
T KOG2325|consen 217 LWIIYIVIILFFFKEV 232 (488)
T ss_pred HHHHHHHHHHhheeec
Confidence 7888887777666654
No 257
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=81.36 E-value=76 Score=33.45 Aligned_cols=106 Identities=16% Similarity=0.122 Sum_probs=60.0
Q ss_pred HHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHH--hccc
Q 012185 298 NSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTL--LGFP 375 (469)
Q Consensus 298 ~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~Gi~ 375 (469)
-++......++.|++.+|+|..|.=..|.....+|+... +...+...+ |.+.......+..+++ +|.
T Consensus 302 gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~-v~~~~~~~~---------~~~~~s~~~l~~gi~~SR~GL- 370 (432)
T PF06963_consen 302 GAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALC-VVSFWAPGS---------PFSSISAYLLLGGIALSRIGL- 370 (432)
T ss_pred HHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHH-HHHHhcCCC---------CchhhHHHHHHHHHHHHHHHH-
Confidence 445667778899999999999887777777776665433 222222110 0012223333333332 221
Q ss_pred hhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHh
Q 012185 376 LAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVS 417 (469)
Q Consensus 376 ~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s 417 (469)
|+ +.-.--.++=|..|++ .+|...|+.+....+-.++.-
T Consensus 371 W~-fDL~~~qi~Qe~V~~~--~Rg~v~gvq~sl~~lf~ll~~ 409 (432)
T PF06963_consen 371 WS-FDLAVTQIMQENVPES--ERGAVSGVQNSLQSLFELLSF 409 (432)
T ss_pred Hh-hhHHHHHhhcccCCHH--HhhHHHHHHHHHHHHHHHHHH
Confidence 11 1111123556667765 688888888888877776643
No 258
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=80.41 E-value=2.7 Score=45.14 Aligned_cols=115 Identities=15% Similarity=0.076 Sum_probs=70.5
Q ss_pred HHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhc
Q 012185 310 EPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAE 389 (469)
Q Consensus 310 ~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise 389 (469)
.++++|+|+-+++..++..+++=++...... |+|.++-+=.+-|+..+...|.--+.++.
T Consensus 427 ~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~--------------------n~W~vLPieilqgit~aliWaa~~sY~s~ 486 (618)
T KOG3762|consen 427 FKLIEKIGHVNVMYLGLACNVGRFLYYSYLQ--------------------NPWMVLPIEILQGITHALIWAAIISYASH 486 (618)
T ss_pred HHHHHHhcccceeeehhhHHHHHHHHHHHhc--------------------CchheeeHHHHHHHHHHHHHHHHHHHHHh
Confidence 3566788888888777766655333222222 47777777778888888777766667777
Q ss_pred cccCCCCCccchhhHHHHH-HHHHHHHHhhccccceecccCccchHHHHHHHHHHHHHHH
Q 012185 390 LTADSGGGQGLAIGVLNLA-IVIPQMIVSLGAGPWDALFGGGNIPAFVLASLSALAGGVV 448 (469)
Q Consensus 390 ~~p~~~~~~G~~~gi~n~~-i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~~liaai~ 448 (469)
..|+. -+.+..|++... --+.--+-+++.|.+++.+|. ...|..+++.+++..++
T Consensus 487 vaPp~--l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~--~ttf~~~giAcl~~l~~ 542 (618)
T KOG3762|consen 487 VAPPG--LRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGA--RTTFRIFGIACLVTLAL 542 (618)
T ss_pred hCCCc--chHHHHHHHHHHhcccCcchhhhhhhhhheeehh--HHHHHHHHHHHHHHHHH
Confidence 77765 222223332211 112222346677888888874 36788877777666553
No 259
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=78.51 E-value=97 Score=32.96 Aligned_cols=95 Identities=16% Similarity=0.096 Sum_probs=53.3
Q ss_pred HHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhccc---CCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchh
Q 012185 310 EPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREY---SGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAI 386 (469)
Q Consensus 310 ~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aL 386 (469)
.+-+|++||+++..++..+--++.++..+.. + ++. +++....+.++ ....+++.-.++|++-+++++.=+.+
T Consensus 303 ~~rir~fg~~~~~~~~~~~~~~~~~li~l~~--p-~dap~~~t~~~~~~~~~--~~~~~~ii~~l~G~~D~~~~t~~~~i 377 (461)
T KOG3098|consen 303 SKRIRGFGRKPTVLIGIIIHLIGFLLIHLSF--P-NDAPLRPTDSPPLLFTP--SYYLALIIGFLLGFGDACFNTQRYVI 377 (461)
T ss_pred hhhhhhcccCcchhHHHHHHHHHHHHHhccc--c-ccCCCCCCccccccccc--chhHHHHHHHHHhhHHHHHHHHHHHH
Confidence 3445667888887776555443332222211 1 111 11111111112 24567777788999999999999999
Q ss_pred hhccccCCCCCccchhhHHHHHHHHH
Q 012185 387 TAELTADSGGGQGLAIGVLNLAIVIP 412 (469)
Q Consensus 387 ise~~p~~~~~~G~~~gi~n~~i~l~ 412 (469)
++.+.|++ +-....+.-....++
T Consensus 378 i~~~~~~~---~~~~fsi~kfyq~~~ 400 (461)
T KOG3098|consen 378 IALLYPDD---RAQAFSLFKFYQSVA 400 (461)
T ss_pred HHHHhcCc---hHHHHHHHHHHHHHH
Confidence 99999764 333344444443333
No 260
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=72.54 E-value=66 Score=33.68 Aligned_cols=105 Identities=10% Similarity=-0.007 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCc
Q 012185 239 AMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGS 318 (469)
Q Consensus 239 ~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~ 318 (469)
+...+|+-.||.++ -|--=|.|+|+.+ |..|-++++.+++=--++. |+ ..+..++.-.+.|.+|-
T Consensus 6 ~~~llc~~gf~~~f--rPsEPfl~~yL~~------~~kn~T~~qv~~~i~Pv~t-----YS--yl~~l~~vflltd~l~Y 70 (412)
T PF01770_consen 6 ITLLLCLFGFFKEF--RPSEPFLTPYLTG------PDKNFTEEQVNNEIYPVWT-----YS--YLAFLLPVFLLTDYLRY 70 (412)
T ss_pred HHHHHHHHHHHHhc--CCCCccchHHHcC------CccCCCHHHHHHhhhhHHH-----HH--HHHHHHHHHHHHHHhhh
Confidence 34456777776654 2444455665533 1112223334433222221 22 23344556678899999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhh
Q 012185 319 RLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAI 378 (469)
Q Consensus 319 r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~ 378 (469)
|++.+++.+...+....+.+.. .+...-+.-.+.|+..++
T Consensus 71 kpviil~~~~~i~t~~lll~~~--------------------sv~~mq~~q~~yg~~~a~ 110 (412)
T PF01770_consen 71 KPVIILQALSYIITWLLLLFGT--------------------SVLAMQLMQFFYGLATAA 110 (412)
T ss_pred hHHHHHHHHHHHHHHHHHHHHC--------------------cHHHHHHHHHHHHHHHHH
Confidence 9999887666554444333322 255666677777877774
No 261
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=70.43 E-value=1.1e+02 Score=32.03 Aligned_cols=93 Identities=24% Similarity=0.264 Sum_probs=56.3
Q ss_pred cchhhHHHHHHHHHhccccccchhHHHHHhcCCCccchh--hHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhh
Q 012185 43 TRAAFVFVIGFWLLDLANNTVQGPARALLADLSGPDQRN--SANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACC 120 (469)
Q Consensus 43 ~~~i~~~v~g~~llD~a~n~~~~p~rAli~D~~p~~qr~--~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~ 120 (469)
.+.-+++...+++++++....|+....+.++..++=-|+ .+.++.+.+.++-.++.-.+.. |
T Consensus 114 ~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~P~~ytqavm~G~a~aG~l~Sl~~i~tka~~~--~-------------- 177 (406)
T KOG1479|consen 114 NGFFLVTLIIVVLLNLANAVVQGSLYGLAGLFPSEYTQAVMSGQALAGTLTSLLRILTKAAFS--D-------------- 177 (406)
T ss_pred chhHHHHHHHHHHHhhhhhhhccchhhhhhcCCHHHHHHHHhcchhHhHHHHHHHHHHHHhcC--C--------------
Confidence 345567788899999999999999999999986553343 3333333333332222211110 0
Q ss_pred cccchhHHHHHHHHHHHHHHhhheeEEeeccCC
Q 012185 121 AACGNLKAAFLVAVVFLTLCALVTIYFADEVPL 153 (469)
Q Consensus 121 ~~~~~~~~~f~i~~i~~~i~~~it~~~v~E~p~ 153 (469)
....-..-|.++.++.++|++.-. ..|-.|.
T Consensus 178 -~~~sA~~yF~~s~~~~llC~i~y~-~l~~lpf 208 (406)
T KOG1479|consen 178 -SRTSALIYFITSTVILLLCFVLYL-VLPKLPF 208 (406)
T ss_pred -CCceeehhHHHHHHHHHHHHHHHH-HhhcchH
Confidence 012334558888888888887655 4444443
No 262
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=69.00 E-value=48 Score=35.20 Aligned_cols=96 Identities=11% Similarity=0.068 Sum_probs=60.3
Q ss_pred HHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhcc
Q 012185 295 LLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGF 374 (469)
Q Consensus 295 l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi 374 (469)
+.+.-....++.++.|.+++++|.|..+++|...++...++ ++.. |.+..+..-++.|+
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~g--fl~~-------------------N~y~~yfssallG~ 114 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLG--FLFP-------------------NSYYLYFSSALLGF 114 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHH--HHhc-------------------chHHHHHHHHHhhh
Confidence 33333456777889999999999999999998888764443 3321 46778888889999
Q ss_pred chhhhccccc-hhhhccccCC--CCCccchhhHHHHHHHHH
Q 012185 375 PLAITYSVPF-AITAELTADS--GGGQGLAIGVLNLAIVIP 412 (469)
Q Consensus 375 ~~a~~~~vP~-aLise~~p~~--~~~~G~~~gi~n~~i~l~ 412 (469)
+.| +.|.-. ..++|...++ +|.-+.--+++++...+.
T Consensus 115 Gaa-llw~GqG~ylt~~st~~tie~Nisi~Wai~~~~li~G 154 (461)
T KOG3098|consen 115 GAA-LLWTGQGGYLTSNSTRETIERNISIFWAIGQSSLIIG 154 (461)
T ss_pred hHH-heecccceehhhcCChhhHHHHHHHHHHHHHHHHHhh
Confidence 988 445422 2333333322 123444445555554444
No 263
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=65.94 E-value=1.9e+02 Score=30.98 Aligned_cols=89 Identities=8% Similarity=-0.021 Sum_probs=51.7
Q ss_pred HHHHHHHHHhhcchhhHhhh-cCCCcccccccCCCccchh-----hHHHHHHHHHhccccccch-hHHHHHhcCCCccch
Q 012185 8 KTAIYSCRMSDDFCCYIGYI-LGDTKEHCSKFRGTRTRAA-----FVFVIGFWLLDLANNTVQG-PARALLADLSGPDQR 80 (469)
Q Consensus 8 ~~~~~i~llll~~~~~i~~~-l~d~~~~~~~~~~~~~~~i-----~~~v~g~~llD~a~n~~~~-p~rAli~D~~p~~qr 80 (469)
+...+.++.+.|+.+-+.-- ..|++. .....+-.|-+ |...+-.++-++--+.+.+ -.-.+..|+++.+|-
T Consensus 101 ~fF~~f~~vlyP~~~~lhp~~~~~~~~--~~~~~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eA 178 (491)
T PF03219_consen 101 GFFALFAFVLYPNRDILHPDAFADKLL--AILPPGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEA 178 (491)
T ss_pred HHHHHHHHHHhhchhhcCCCHHHHHhh--hhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHH
Confidence 45667788888888776311 111110 00011111111 1222333333555555544 468888999999999
Q ss_pred hhHHHHHHHHHHhhhHHh
Q 012185 81 NSANAIFCSWMAVGNILG 98 (469)
Q Consensus 81 ~~a~~~~~~~~glG~ilg 98 (469)
.|-+.......++|.+++
T Consensus 179 KRfYpl~g~ganigli~s 196 (491)
T PF03219_consen 179 KRFYPLFGLGANIGLIFS 196 (491)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999988888887764
No 264
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=64.33 E-value=22 Score=38.40 Aligned_cols=47 Identities=15% Similarity=0.261 Sum_probs=39.1
Q ss_pred ccccccchhHHHHHhcCCCccchhhHHHHHH-HHHHhhhHHhhccccc
Q 012185 58 LANNTVQGPARALLADLSGPDQRNSANAIFC-SWMAVGNILGFSAGAS 104 (469)
Q Consensus 58 ~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~-~~~glG~ilgyl~g~~ 104 (469)
++..++.+.+-+|+.+.+||+-+..+.++.+ .+-|+|--+|.++|+.
T Consensus 471 it~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~ 518 (618)
T KOG3762|consen 471 ITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGF 518 (618)
T ss_pred HHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhh
Confidence 3455677888999999999999999988765 4678999999999876
No 265
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=58.16 E-value=1.5e+02 Score=29.07 Aligned_cols=25 Identities=12% Similarity=0.265 Sum_probs=17.3
Q ss_pred cchhHHHHHHHHHHHHHHhhheeEE
Q 012185 123 CGNLKAAFLVAVVFLTLCALVTIYF 147 (469)
Q Consensus 123 ~~~~~~~f~i~~i~~~i~~~it~~~ 147 (469)
..+|+.++.+.++..++.+++-.++
T Consensus 37 ~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 37 TNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4589999888877766665554444
No 266
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=51.28 E-value=24 Score=35.14 Aligned_cols=94 Identities=17% Similarity=0.075 Sum_probs=59.4
Q ss_pred HHHHHHHHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccceeccc--------------
Q 012185 363 VASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFG-------------- 428 (469)
Q Consensus 363 ~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g-------------- 428 (469)
...++...+.|.+.+...+.-=+++++.-+++ +....+++...+..+..++.+.+.+.++....
T Consensus 11 ~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~--~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~ 88 (310)
T TIGR01272 11 VLFLGALFVLASGLTILQVAANPYVSILGPIE--TAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEA 88 (310)
T ss_pred HHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcc--hHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHH
Confidence 34455555677777777776666777777664 56777889998888888888877776552210
Q ss_pred CccchHHH-HHHHHHHHHHHHhhhcccCCCC
Q 012185 429 GGNIPAFV-LASLSALAGGVVATLKLPHLSS 458 (469)
Q Consensus 429 ~~~~~~f~-~~~v~~liaai~~~~~vpet~g 458 (469)
.+....+. ++++..+++.++.....||.+.
T Consensus 89 ~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~ 119 (310)
T TIGR01272 89 AKVHTPYLLLAGALAVLAIIFAFLPLPELQE 119 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCCCc
Confidence 01123344 5666666665555556776543
No 267
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=50.79 E-value=53 Score=31.88 Aligned_cols=73 Identities=12% Similarity=0.199 Sum_probs=44.6
Q ss_pred hhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHHhhhe
Q 012185 65 GPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVT 144 (469)
Q Consensus 65 ~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~~~it 144 (469)
..+-.--....| ++||.+.++..-+.|+++.+=-.+... .+ . ++..+.+++++..+.+++++ .
T Consensus 115 ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~-----~f---~-------~~~~~fll~la~~~~~v~l~-~ 177 (250)
T PF06813_consen 115 TASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSA-----FF---G-------DDPSSFLLFLAVLPAVVCLV-A 177 (250)
T ss_pred hHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHH-----Hc---C-------CChHHHHHHHHHHHHHHHHH-H
Confidence 343344445565 689999999999999887763322211 11 1 12345666777777766654 5
Q ss_pred eEEeeccCCC
Q 012185 145 IYFADEVPLT 154 (469)
Q Consensus 145 ~~~v~E~p~~ 154 (469)
+.++|+.|..
T Consensus 178 ~~~vr~~~~~ 187 (250)
T PF06813_consen 178 MFFVRPVPPS 187 (250)
T ss_pred hhheeccCCc
Confidence 6678877643
No 268
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=50.67 E-value=11 Score=38.75 Aligned_cols=51 Identities=16% Similarity=0.178 Sum_probs=42.4
Q ss_pred hHHHHHHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccc
Q 012185 47 FVFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 104 (469)
Q Consensus 47 ~~~v~g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~ 104 (469)
+.+=+|+|++|+++ .-.+-|.+|++||..+++.+..+...=.++.++++-+
T Consensus 394 aaaR~GLW~fDlAV-------tqimQe~VpEseR~vv~gvqnsL~~~ldll~~ilvIi 444 (503)
T KOG2601|consen 394 AAARLGLWMFDLAV-------TQIMQETVPESERCVVFGVQNSLNSALDLLKDILVII 444 (503)
T ss_pred HHHHhhHHhccHHH-------HHHHHHhcchhhhhhhHhHHHHHHHHHHHHHHhEEEE
Confidence 34448999999986 3345599999999999999999999999999988854
No 269
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=50.17 E-value=46 Score=33.79 Aligned_cols=85 Identities=9% Similarity=0.004 Sum_probs=55.2
Q ss_pred HHHHHHHHHhccchhhhccccchhhhccccCC-CCCccchhhHHHHHHHHHHHHHhhccccceecccCccchHHHHHHHH
Q 012185 363 VASLVVFTLLGFPLAITYSVPFAITAELTADS-GGGQGLAIGVLNLAIVIPQMIVSLGAGPWDALFGGGNIPAFVLASLS 441 (469)
Q Consensus 363 ~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~-~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~~~~g~~~~~~f~~~~v~ 441 (469)
....+...+.+++.|..=..--+++++.++++ ++.+-.....+...+.+.-+++....+.+-+..| ....|.+.+++
T Consensus 34 ~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~~~~--~~~~f~i~~~~ 111 (372)
T PF00854_consen 34 GLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQNYG--WFLGFGIPAIG 111 (372)
T ss_dssp CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCS---HHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhccccc--hhhhhhHHHHH
Confidence 34455555667777777777777999998876 3344444556666666666666666666665554 23568888888
Q ss_pred HHHHHHHh
Q 012185 442 ALAGGVVA 449 (469)
Q Consensus 442 ~liaai~~ 449 (469)
.+++.+..
T Consensus 112 ~~~~~~~f 119 (372)
T PF00854_consen 112 MLLALIVF 119 (372)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88777633
No 270
>PRK10692 hypothetical protein; Provisional
Probab=49.72 E-value=24 Score=28.20 Aligned_cols=55 Identities=9% Similarity=-0.042 Sum_probs=37.1
Q ss_pred CchHHHHHHHHHHHHHHHHHHH--HHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccc
Q 012185 317 GSRLVWAISNFIVFACMATTAI--ISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSV 382 (469)
Q Consensus 317 g~r~l~~~s~~~~ai~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~v 382 (469)
-||....+|+++|+++|+.+.. ..+.. ++ + |..+....+.-.+++||..+++.|+
T Consensus 2 KRk~a~~~GN~lMglGmv~Mv~gigysi~-~~----i------~~L~Lp~~~~~gal~~IFiGAllWL 58 (92)
T PRK10692 2 KRKNASLLGNVLMGLGLVVMVVGVGYSIL-NQ----L------PQLNLPQFFAHGALLSIFVGALLWL 58 (92)
T ss_pred cchhhHHHhhHHHHHHHHHHHHHHHHHHH-Hh----c------ccCCchHHHHhhHHHHHHHHHHHHH
Confidence 3788889999999999876543 11111 10 1 2334556777788899999999995
No 271
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=48.82 E-value=31 Score=26.98 Aligned_cols=55 Identities=16% Similarity=0.226 Sum_probs=37.0
Q ss_pred cchhhHHHHHHHHHHhhhHHhhccccccchhhhhhcccchhhhcccchhHHHHHHHHHHHHHHhhheeEEeeccCC
Q 012185 78 DQRNSANAIFCSWMAVGNILGFSAGASGSWHRWFPFLTSRACCAACGNLKAAFLVAVVFLTLCALVTIYFADEVPL 153 (469)
Q Consensus 78 ~qr~~a~~~~~~~~glG~ilgyl~g~~~~w~~~~~~~~~~~~~~~~~~~~~~f~i~~i~~~i~~~it~~~v~E~p~ 153 (469)
+-|.++.-+.+....++++++++.|.+. .+++.++.+-++-.+++.++ .+|+=|.
T Consensus 4 ~gQ~~ae~l~~~il~~~~iisfi~Gy~~------------------q~~~~~~~~~~~g~~~~~lv---~vP~Wp~ 58 (76)
T PF06645_consen 4 KGQRLAEKLMQYILIISAIISFIVGYIT------------------QSFSYTFYIYGAGVVLTLLV---VVPPWPF 58 (76)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------HHHHHHHHHHHHHHHHHHhh---eeCCcHh
Confidence 3467888888888999999999888641 25566666655555555543 4666554
No 272
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=46.93 E-value=31 Score=27.98 Aligned_cols=25 Identities=24% Similarity=0.384 Sum_probs=22.2
Q ss_pred chhhHHHHHHHHHHhhhHHhhcccc
Q 012185 79 QRNSANAIFCSWMAVGNILGFSAGA 103 (469)
Q Consensus 79 qr~~a~~~~~~~~glG~ilgyl~g~ 103 (469)
-|.++--+++....+|+++|++.|+
T Consensus 20 gQkkaEr~~q~ilti~aiVg~i~Gf 44 (101)
T KOG4112|consen 20 GQKKAERFQQLILTIGAIVGFIYGF 44 (101)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3678899999999999999998886
No 273
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=40.82 E-value=79 Score=31.75 Aligned_cols=54 Identities=15% Similarity=0.052 Sum_probs=41.2
Q ss_pred HHHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccc
Q 012185 51 IGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 104 (469)
Q Consensus 51 ~g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~ 104 (469)
++..++.++-..+....--.++-++|++|.|.|++..+...++|-.+-..+.++
T Consensus 357 ~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~ 410 (459)
T KOG4686|consen 357 TSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGF 410 (459)
T ss_pred HHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhhe
Confidence 345566666666666566678888999999999999999999997776655544
No 274
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=38.76 E-value=4.9e+02 Score=27.41 Aligned_cols=79 Identities=10% Similarity=-0.009 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhH-HHHHHHHHHHHHHHHHHHhHHHhhhhcC
Q 012185 239 AMHVVLIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVR-EGAFGLLLNSVVLGVSSFLIEPMCRWIG 317 (469)
Q Consensus 239 ~l~~l~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~-~G~~~l~i~~iv~~i~s~i~~~l~~~ig 317 (469)
..+++++.||++-.+-=.+-|-.+-|+.+ +|.++ .. .+.+++. -++..++.+-.+++++||..
T Consensus 3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~-i~p~s--------------Ll~~siygl~-~~~~~~~f~~~vG~~iD~~~ 66 (432)
T PF06963_consen 3 ALWRLYLSHFLSTWGDRMWEFAVPLFLIS-IFPGS--------------LLPVSIYGLV-RSLSAILFGPWVGRWIDRSP 66 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCC--------------cHHHHHHHHH-HHHHHHHhhHHHHHHHhCCc
Confidence 46778999999865555555555555554 66542 12 2333432 33455666667889999999
Q ss_pred chHHHHHHHHHHHHHH
Q 012185 318 SRLVWAISNFIVFACM 333 (469)
Q Consensus 318 ~r~l~~~s~~~~ai~~ 333 (469)
|.+..-.+.+..-++.
T Consensus 67 Rl~~~~~~l~~Qn~sv 82 (432)
T PF06963_consen 67 RLKVIRTSLVVQNLSV 82 (432)
T ss_pred chhhHHHHHHHHHHHH
Confidence 8877666655444433
No 275
>PF10762 DUF2583: Protein of unknown function (DUF2583) ; InterPro: IPR019698 Some members in this entry are annotated as YchH however currently no function is known.
Probab=37.96 E-value=36 Score=27.01 Aligned_cols=54 Identities=13% Similarity=-0.031 Sum_probs=34.7
Q ss_pred chHHHHHHHHHHHHHHHHHHH--HHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccc
Q 012185 318 SRLVWAISNFIVFACMATTAI--ISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSV 382 (469)
Q Consensus 318 ~r~l~~~s~~~~ai~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~v 382 (469)
||....+|+.+|+++|+.+.. ..+.. +. + |..+....+.-.+++||..+++.|+
T Consensus 3 Rk~a~~~GN~lMglGmv~Mv~gigysi~-~~----~------~~L~Lp~~~~~gal~~IFiGAllWL 58 (89)
T PF10762_consen 3 RKNAFLLGNVLMGLGMVVMVGGIGYSIL-SQ----I------PQLGLPQFLAHGALFSIFIGALLWL 58 (89)
T ss_pred chhhHHHhhHHHHHhHHHHHHhHHHHHH-Hh----c------ccCCCcHHHHhhHHHHHHHHHHHHH
Confidence 788888999999998875532 11111 10 1 1223445666777888888888885
No 276
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=34.90 E-value=2.4e+02 Score=30.14 Aligned_cols=116 Identities=7% Similarity=-0.002 Sum_probs=65.5
Q ss_pred HHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCc------ccCCCCc---------hhHHHHHHH
Q 012185 303 GVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIISVISVREYSGGI------EHGIGAN---------QAIKVASLV 367 (469)
Q Consensus 303 ~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~~~~~~~~~~~~------~~~~~~~---------~~~~~~~~~ 367 (469)
++...+..++++|++|++++-+-...|...++..+++.. +.+++.+.. ....|+. .|.-...++
T Consensus 58 ~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~-p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv 136 (472)
T TIGR00769 58 VIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIY-PLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYV 136 (472)
T ss_pred HHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHh-cchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHH
Confidence 333566788999999999988877777766655555421 111110000 0000100 011112333
Q ss_pred HHHHhccchhhhcc-ccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccce
Q 012185 368 VFTLLGFPLAITYS-VPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWD 424 (469)
Q Consensus 368 ~~~~~Gi~~a~~~~-vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~ 424 (469)
..-++|-- ..+ +=|+.+.|....+ ...+..+++...-.++.++.+.....+.
T Consensus 137 ~~elw~~~---vvS~lFW~fandi~t~~--qakRfy~l~~~ganlg~i~sg~~~~~~~ 189 (472)
T TIGR00769 137 MAELWGSV---VLSLLFWGFANQITTID--EAKRFYALFGLGANVALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHH---HHHHHHHHHHHhcCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333322 222 3345888888765 5778899999999999998886665543
No 277
>KOG4812 consensus Golgi-associated protein/Nedd4 WW domain-binding protein [General function prediction only]
Probab=33.88 E-value=1.2e+02 Score=29.07 Aligned_cols=29 Identities=17% Similarity=0.537 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhc
Q 012185 239 AMHVVLIVMALTWLSWFPFFLFDTDWMGR 267 (469)
Q Consensus 239 ~l~~l~~~~f~~w~g~~~~~~y~t~~vg~ 267 (469)
-||-+|++.+|.|+|++--....|+-.|+
T Consensus 163 F~~af~vAflFnwIGFlltycl~tT~agR 191 (262)
T KOG4812|consen 163 FMWAFIVAFLFNWIGFLLTYCLTTTHAGR 191 (262)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHhhh
Confidence 36778999999999988877777776665
No 278
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=32.60 E-value=2.4e+02 Score=23.76 Aligned_cols=50 Identities=12% Similarity=-0.092 Sum_probs=30.7
Q ss_pred hhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhc-CchHHHHHHHHHHHHHHH
Q 012185 280 EVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWI-GSRLVWAISNFIVFACMA 334 (469)
Q Consensus 280 ~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~i-g~r~l~~~s~~~~ai~~~ 334 (469)
+.+.|.++++..+= -+..++....++++.||+ |-++...+..++.+.|..
T Consensus 38 s~k~~~~a~klsse-----fIsGilVGa~iG~llD~~agTsPwglIv~lllGf~AG 88 (116)
T COG5336 38 SIKGYAQAFKLSSE-----FISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAG 88 (116)
T ss_pred hhhhhhhhHHHHHH-----HHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 34556666654311 134566677889999997 666666666666655443
No 279
>PRK03612 spermidine synthase; Provisional
Probab=30.70 E-value=2.7e+02 Score=30.05 Aligned_cols=33 Identities=12% Similarity=-0.044 Sum_probs=24.2
Q ss_pred ccchhhHHHHHHHHHHHHHhhccccce-ecccCc
Q 012185 398 QGLAIGVLNLAIVIPQMIVSLGAGPWD-ALFGGG 430 (469)
Q Consensus 398 ~G~~~gi~n~~i~l~Qil~s~~~g~l~-~~~g~~ 430 (469)
.|...|-+..+.++.-++.++..+.++ ..+|..
T Consensus 143 ~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~ 176 (521)
T PRK03612 143 LGHNVATVLAADYLGALVGGLAFPFLLLPRLGLI 176 (521)
T ss_pred hhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchH
Confidence 566788888888888888888777654 466643
No 280
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=29.05 E-value=1.4e+02 Score=26.35 Aligned_cols=35 Identities=17% Similarity=0.046 Sum_probs=24.1
Q ss_pred HHHhcCCCccchhhHHHHHHHHHHhhhHHhhcccc
Q 012185 69 ALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGA 103 (469)
Q Consensus 69 Ali~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~ 103 (469)
.=+-|+.||.+|....+..+.......-+....|.
T Consensus 56 ~ALkDm~Pp~~R~~i~~~~s~t~s~~ks~~sfsGk 90 (145)
T TIGR00986 56 YALKDIVPPTTRGWIYHKYSTTTNFVKSTLSFAGR 90 (145)
T ss_pred HHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence 34679999999998888776665554444444443
No 281
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=27.03 E-value=21 Score=35.38 Aligned_cols=167 Identities=16% Similarity=0.109 Sum_probs=0.0
Q ss_pred HH-HHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHH
Q 012185 251 WL-SWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIV 329 (469)
Q Consensus 251 w~-g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ 329 (469)
|. |=+.+-+|.|+++++ || +|.+-.+.++ .+.+...+.+.+.||.|||+..+.=.+.+
T Consensus 54 WLQgPYvYyLYstYgFgk----G~----------------IgqLfiaGfg-SsmLFGtivgSLaDkqGRKracvtycitY 112 (454)
T KOG4332|consen 54 WLQGPYVYYLYSTYGFGK----GD----------------IGQLFIAGFG-SSMLFGTIVGSLADKQGRKRACVTYCITY 112 (454)
T ss_pred hhcCceeeeeehhcCccC----Cc----------------cceeeecccc-hHHHHHHHHHHHHhhhccccceeeehHHH
Q ss_pred HHHHHHHHHHHhhhhcccCCCcccCCCCchhHHHHHHHHHHHhccchhhhccccchhhhcccc-CCCCCccchhhHHHHH
Q 012185 330 FACMATTAIISVISVREYSGGIEHGIGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTA-DSGGGQGLAIGVLNLA 408 (469)
Q Consensus 330 ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p-~~~~~~G~~~gi~n~~ 408 (469)
.+|.+.-.--. .-..++.=++-|++.+...+.==+-.-..|. .++=.+-..-.-+.=+
T Consensus 113 iLsCiTKhSpq---------------------YkVLmVGR~LGGiaTsLLFSaFEsWliaEHnekr~FeqqWls~TFskA 171 (454)
T KOG4332|consen 113 ILSCITKHSPQ---------------------YKVLMVGRVLGGIATSLLFSAFESWLIAEHNEKRGFEQQWLSVTFSKA 171 (454)
T ss_pred HHHHHhhcCCc---------------------eEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhccCChHhhhhHHHHHH
Q ss_pred HHHHHHHHhhcccc----ceecccCccchHHHHHHHHHHHHHHHhhhcccCCCCC
Q 012185 409 IVIPQMIVSLGAGP----WDALFGGGNIPAFVLASLSALAGGVVATLKLPHLSSN 459 (469)
Q Consensus 409 i~l~Qil~s~~~g~----l~~~~g~~~~~~f~~~~v~~liaai~~~~~vpet~g~ 459 (469)
+++.|-+++++.|. +++.++-+++..|..++.+-.++.-....--.|.-|+
T Consensus 172 ~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil~~W~ENygd 226 (454)
T KOG4332|consen 172 VFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVILSSWSENYGD 226 (454)
T ss_pred HHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHhhhhhccCC
No 282
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=26.48 E-value=3.2e+02 Score=21.83 Aligned_cols=45 Identities=16% Similarity=0.098 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHhHHHhhhhcCchHHHHHHHHHHHHHHHHHHHHH
Q 012185 296 LLNSVVLGVSSFLIEPMCRWIGSRLVWAISNFIVFACMATTAIIS 340 (469)
Q Consensus 296 ~i~~iv~~i~s~i~~~l~~~ig~r~l~~~s~~~~ai~~~~~~~~~ 340 (469)
..|.+-..+-++...++.++.++++++..+.+..+++.+.+++..
T Consensus 34 saNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 34 SANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred HHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 445555666677777777777778888888887777766666554
No 283
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=25.68 E-value=24 Score=38.35 Aligned_cols=156 Identities=13% Similarity=0.088 Sum_probs=2.9
Q ss_pred HHHHHHHHHHHhHHHhhhhcCchHHHH-HHHHHHHHHHHHHHHHHhhhhcccCCC------------c-cc---------
Q 012185 297 LNSVVLGVSSFLIEPMCRWIGSRLVWA-ISNFIVFACMATTAIISVISVREYSGG------------I-EH--------- 353 (469)
Q Consensus 297 i~~iv~~i~s~i~~~l~~~ig~r~l~~-~s~~~~ai~~~~~~~~~~~~~~~~~~~------------~-~~--------- 353 (469)
.|-+...+..+++..+-.| +.|+-|+ +|.++++++.++.++=+.... .|+.. . ..
T Consensus 46 ~~di~~~~~~~~vsy~g~~-~hrprwig~g~~~~~~g~~l~~lPhf~~~-~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~ 123 (539)
T PF03137_consen 46 SYDIGSLVVVLFVSYFGGR-GHRPRWIGIGALLMGLGSLLFALPHFLSG-PYSYEEASNSNGNSSISSNLCDSSSSSQAS 123 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHhhh-cCCcceeeecHHHHHHHHHHHhccHhhcC-CCcccccccccccccccccccccccccccc
Confidence 4555666666666666666 4555555 688888888776665332211 11000 0 00
Q ss_pred -------C--CCCchhHHHHHHHHHHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccce
Q 012185 354 -------G--IGANQAIKVASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWD 424 (469)
Q Consensus 354 -------~--~~~~~~~~~~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~ 424 (469)
. ....+.-.+..++.-.+.|++-++++++-.+.+=|-.+++ ..+.|+|++.....+...+--+..+..+
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~--~splYiGi~~~~~~lGPa~Gf~lg~~~L 201 (539)
T PF03137_consen 124 SDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKK--NSPLYIGILYAMSILGPALGFLLGSFCL 201 (539)
T ss_dssp ----------------------------SSS-------------------------------------------------
T ss_pred CccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccc--cCccchhhhhHHhhccHHHHHHHHHHHH
Confidence 0 0001112345556677799999999998888888887765 7899999999998887665444444333
Q ss_pred ec----c-------c---Cc-----cchH-HHHHHHHHHHHHHHhhhc---ccCC
Q 012185 425 AL----F-------G---GG-----NIPA-FVLASLSALAGGVVATLK---LPHL 456 (469)
Q Consensus 425 ~~----~-------g---~~-----~~~~-f~~~~v~~liaai~~~~~---vpet 456 (469)
+. . + .+ .+|. |++.|++.++.++-...+ +|++
T Consensus 202 ~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~ 256 (539)
T PF03137_consen 202 RIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGT 256 (539)
T ss_dssp -------------------------------------------------------
T ss_pred hceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCc
Confidence 21 1 0 01 1233 777888888888755433 4555
No 284
>PF10997 DUF2837: Protein of unknown function (DUF2837); InterPro: IPR021260 This bacterial family of proteins has no known function.
Probab=24.87 E-value=6.5e+02 Score=24.50 Aligned_cols=63 Identities=16% Similarity=0.071 Sum_probs=44.8
Q ss_pred ccchhhHHHHHHHHH-hccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhccccc
Q 012185 42 RTRAAFVFVIGFWLL-DLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGAS 104 (469)
Q Consensus 42 ~~~~i~~~v~g~~ll-D~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~~ 104 (469)
++.+..++..++..+ -=..|..|+|.-+-+.|..+++++....-..-++.-+++-+|.++|.+
T Consensus 23 ~kiA~a~SLfni~~LvSRtan~~QaPllg~lvd~~~~~~~~~~l~~~~r~vi~~at~gtl~g~l 86 (254)
T PF10997_consen 23 GKIATAFSLFNIIVLVSRTANMFQAPLLGSLVDTAISQGQLSDLLNQFRLVILAATVGTLLGIL 86 (254)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHHH
Confidence 345666666666553 446799999999999999999666655555555566677777777755
No 285
>PF08229 SHR3_chaperone: ER membrane protein SH3 ; InterPro: IPR013248 This family of proteins are membrane localised chaperones that are required for correct plasma membrane localisation of amino acid permeases (AAPs) []. Shr3 prevents AAPs proteins from aggregating and assists in their correct folding. In the absence of Shr3, AAPs are retained in the ER.
Probab=24.82 E-value=5.2e+02 Score=24.11 Aligned_cols=93 Identities=15% Similarity=0.241 Sum_probs=47.8
Q ss_pred HHHHHhccCCHHHHHH-HHHHHHHHHHHHHHhhhhhhhhhceeecCCCCCCChhhhhHHHHhHHHHHHHHHHHHHHHHHH
Q 012185 228 NLLTSLRHLPPAMHVV-LIVMALTWLSWFPFFLFDTDWMGREVYHGDPKGNDHEVKFYDQGVREGAFGLLLNSVVLGVSS 306 (469)
Q Consensus 228 ~l~~~~~~mP~~l~~l-~~~~f~~w~g~~~~~~y~t~~vg~~vf~g~~~~~~~~~~~y~~gv~~G~~~l~i~~iv~~i~s 306 (469)
..|+.+.+.|+.+.++ -.+..++.+|.+. -+|..++ +...+ + -||++|.+.+++-.++.
T Consensus 49 ~hY~~l~~sP~~v~~~Lh~v~~lglig~~i-----------Kl~kp~e-----~~~lF-d---g~SL~Ly~~~i~vYltn 108 (196)
T PF08229_consen 49 THYQTLHNSPPIVKYILHIVIGLGLIGLLI-----------KLYKPSE-----SNKLF-D---GASLVLYVFGICVYLTN 108 (196)
T ss_pred HHHHHHHhCChHHHHHHHHHHHHHHHHHHH-----------HHcCCcH-----Hhhcc-c---chhHHHHHHHHHHHhHh
Confidence 3455666788877763 4444444444211 1455432 22333 2 35677776666666655
Q ss_pred HhHHHhh---------hhcCchHHHHHHHHHHHHHHHHHHHHH
Q 012185 307 FLIEPMC---------RWIGSRLVWAISNFIVFACMATTAIIS 340 (469)
Q Consensus 307 ~i~~~l~---------~~ig~r~l~~~s~~~~ai~~~~~~~~~ 340 (469)
+.-+... +|-..-+++..|+.+.++++.+..+..
T Consensus 109 i~~gi~~~~~~~~~~v~r~~~l~VlAASn~Ii~~~LvGVLvLQ 151 (196)
T PF08229_consen 109 IVPGIRSVSSGNWGEVDREDGLRVLAASNTIIALVLVGVLVLQ 151 (196)
T ss_pred hHhHHHhcCCCCcccccHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 5433221 222223455667877777665555443
No 286
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=23.95 E-value=1.6e+02 Score=25.82 Aligned_cols=31 Identities=19% Similarity=0.045 Sum_probs=21.5
Q ss_pred HHHhcCCCccchhhHHHHHHHHHHhhhHHhh
Q 012185 69 ALLADLSGPDQRNSANAIFCSWMAVGNILGF 99 (469)
Q Consensus 69 Ali~D~~p~~qr~~a~~~~~~~~glG~ilgy 99 (469)
.=+-|++||..|....+..+.......-+..
T Consensus 58 ~aLkdi~P~~~R~~i~~~~~~~~~~~k~~~~ 88 (137)
T PF04281_consen 58 WALKDIFPPSVRNWISSTVSTTSSAVKSLFS 88 (137)
T ss_pred HHHhccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467999999999888877655544444333
No 287
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=21.99 E-value=2.5e+02 Score=31.81 Aligned_cols=95 Identities=15% Similarity=0.120 Sum_probs=59.9
Q ss_pred HHHHHHHHhccchhhhccccchhhhccccCCCCCccchhhHHHHHHHHHHHHHhhccccce----ec-c---c---Ccc-
Q 012185 364 ASLVVFTLLGFPLAITYSVPFAITAELTADSGGGQGLAIGVLNLAIVIPQMIVSLGAGPWD----AL-F---G---GGN- 431 (469)
Q Consensus 364 ~~~~~~~~~Gi~~a~~~~vP~aLise~~p~~~~~~G~~~gi~n~~i~l~Qil~s~~~g~l~----~~-~---g---~~~- 431 (469)
..++.-.+.||+-.+..++-.+++=|-..++ ....++|++...-.+.=++-=++.+... +. . + .++
T Consensus 239 lff~~q~l~GIG~Tpi~tlGisYiDDnvk~~--~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPr 316 (735)
T KOG3626|consen 239 LFFLGQLLLGIGATPIFTLGISYIDDNVKKK--NSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPR 316 (735)
T ss_pred HHHHHHHHhhcCCCCCccCCCcccccccccc--CCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcc
Confidence 4455566688888887777666666666554 6889999999877666544333333222 22 1 1 111
Q ss_pred ----chH-HHHHHHHHHHHHHHhhhcccCCCCCCc
Q 012185 432 ----IPA-FVLASLSALAGGVVATLKLPHLSSNSF 461 (469)
Q Consensus 432 ----~~~-f~~~~v~~liaai~~~~~vpet~g~~~ 461 (469)
+|. |++.|.+++++++ .+++.|.+..++-
T Consensus 317 WIGAWWlGFLi~g~~~~~~a~-p~f~fPk~lp~~~ 350 (735)
T KOG3626|consen 317 WIGAWWLGFLICGALLLFSAV-PLFFFPKELPKSQ 350 (735)
T ss_pred hhhHHHHHHHHHHHHHHHHHH-HHHhCcccCcccc
Confidence 222 8888999999998 5566676666543
No 288
>KOG2082 consensus K+/Cl- cotransporter KCC1 and related transporters [Inorganic ion transport and metabolism]
Probab=21.88 E-value=3e+02 Score=31.17 Aligned_cols=20 Identities=25% Similarity=0.404 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 012185 320 LVWAISNFIVFACMATTAII 339 (469)
Q Consensus 320 ~l~~~s~~~~ai~~~~~~~~ 339 (469)
.-|..|.+.+++|++.|...
T Consensus 606 yHW~LSflG~sLC~~iMF~~ 625 (1075)
T KOG2082|consen 606 YHWSLSFLGASLCLAIMFIS 625 (1075)
T ss_pred hhhHHHHHHHHHHHHHHHHH
Confidence 45778999999988766644
No 289
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=21.51 E-value=1e+02 Score=32.45 Aligned_cols=56 Identities=23% Similarity=0.345 Sum_probs=47.4
Q ss_pred HHHHHHHHHhccccccchhHHHHHhcCCCccchhhHHHHHHHHHHhhhHHhhcccc
Q 012185 48 VFVIGFWLLDLANNTVQGPARALLADLSGPDQRNSANAIFCSWMAVGNILGFSAGA 103 (469)
Q Consensus 48 ~~v~g~~llD~a~n~~~~p~rAli~D~~p~~qr~~a~~~~~~~~glG~ilgyl~g~ 103 (469)
..++...++-+++.-+.+-+-.|-++.+++++|..+..+.+++..+|..+|-+++.
T Consensus 374 ~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~ 429 (437)
T TIGR00939 374 YFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSF 429 (437)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455677888888888899999999999999999999999999999888876664
Done!