Query 012190
Match_columns 468
No_of_seqs 374 out of 2265
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 00:00:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012190.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012190hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02824 hydrolase, alpha/beta 100.0 1.4E-27 3.1E-32 231.4 23.0 255 167-441 20-293 (294)
2 PRK10349 carboxylesterase BioH 100.0 9.1E-28 2E-32 228.0 19.6 242 168-441 5-255 (256)
3 TIGR02240 PHA_depoly_arom poly 100.0 3.2E-27 7E-32 226.8 20.8 239 178-445 24-269 (276)
4 PRK03592 haloalkane dehalogena 99.9 6.6E-27 1.4E-31 226.9 19.0 255 167-443 19-290 (295)
5 PRK00870 haloalkane dehalogena 99.9 3.1E-26 6.7E-31 222.9 22.2 246 167-441 36-300 (302)
6 TIGR03611 RutD pyrimidine util 99.9 1.4E-26 3.1E-31 218.5 19.1 243 169-435 3-253 (257)
7 PLN02679 hydrolase, alpha/beta 99.9 4.6E-26 9.9E-31 226.8 23.2 257 167-441 74-356 (360)
8 PLN02578 hydrolase 99.9 1.1E-25 2.5E-30 223.6 24.8 248 167-435 78-350 (354)
9 PRK03204 haloalkane dehalogena 99.9 1.3E-25 2.9E-30 216.6 23.4 244 158-439 20-285 (286)
10 TIGR03343 biphenyl_bphD 2-hydr 99.9 6.5E-26 1.4E-30 218.2 21.0 250 157-439 12-280 (282)
11 PLN02965 Probable pheophorbida 99.9 6.5E-26 1.4E-30 215.2 20.4 229 181-436 5-249 (255)
12 TIGR03056 bchO_mg_che_rel puta 99.9 1.6E-25 3.5E-30 214.5 23.2 248 167-436 18-276 (278)
13 PLN03087 BODYGUARD 1 domain co 99.9 1.4E-25 3E-30 227.0 23.4 261 168-443 189-480 (481)
14 PRK10673 acyl-CoA esterase; Pr 99.9 1.9E-25 4.2E-30 211.6 22.5 234 177-440 14-253 (255)
15 TIGR01738 bioH putative pimelo 99.9 1.4E-25 3.1E-30 209.6 20.1 229 179-435 4-243 (245)
16 PHA02857 monoglyceride lipase; 99.9 4.3E-25 9.3E-30 212.0 23.6 250 156-435 5-268 (276)
17 PLN02385 hydrolase; alpha/beta 99.9 2.9E-25 6.3E-30 220.4 23.1 256 156-434 66-339 (349)
18 TIGR02427 protocat_pcaD 3-oxoa 99.9 1.6E-25 3.5E-30 209.8 19.0 238 168-435 3-248 (251)
19 PF12697 Abhydrolase_6: Alpha/ 99.9 3E-25 6.5E-30 204.4 20.4 216 182-432 1-228 (228)
20 PRK10749 lysophospholipase L2; 99.9 8.7E-25 1.9E-29 215.2 24.0 264 154-434 33-323 (330)
21 KOG4178 Soluble epoxide hydrol 99.9 2.6E-25 5.6E-30 207.6 16.3 258 165-441 32-319 (322)
22 KOG4409 Predicted hydrolase/ac 99.9 1.1E-24 2.4E-29 203.8 20.3 255 161-435 74-359 (365)
23 PLN03084 alpha/beta hydrolase 99.9 1.3E-24 2.8E-29 215.9 22.1 244 168-440 118-382 (383)
24 KOG1454 Predicted hydrolase/ac 99.9 1E-25 2.2E-30 219.0 14.0 253 178-443 57-325 (326)
25 PRK06489 hypothetical protein; 99.9 1.9E-24 4.2E-29 215.4 22.1 257 167-443 52-358 (360)
26 PRK11126 2-succinyl-6-hydroxy- 99.9 6.8E-25 1.5E-29 206.2 17.6 224 179-439 2-239 (242)
27 PLN02298 hydrolase, alpha/beta 99.9 3.9E-24 8.4E-29 210.9 23.2 254 155-431 36-304 (330)
28 KOG2564 Predicted acetyltransf 99.9 1E-25 2.2E-30 202.9 9.8 270 143-443 40-328 (343)
29 TIGR03695 menH_SHCHC 2-succiny 99.9 1.2E-23 2.6E-28 196.7 19.0 234 179-435 1-248 (251)
30 TIGR01392 homoserO_Ac_trn homo 99.9 2E-23 4.4E-28 207.4 19.9 252 167-440 18-351 (351)
31 PRK07581 hypothetical protein; 99.9 1.6E-23 3.5E-28 207.2 18.7 258 167-441 28-335 (339)
32 PRK08775 homoserine O-acetyltr 99.9 5.7E-24 1.2E-28 210.6 15.0 255 167-442 48-339 (343)
33 TIGR01250 pro_imino_pep_2 prol 99.9 7E-23 1.5E-27 196.3 20.5 240 179-435 25-285 (288)
34 PRK00175 metX homoserine O-ace 99.9 3.9E-23 8.5E-28 207.0 19.4 263 167-443 35-375 (379)
35 PLN02652 hydrolase; alpha/beta 99.9 1.9E-22 4.2E-27 201.6 24.0 237 178-441 135-386 (395)
36 PLN02894 hydrolase, alpha/beta 99.9 3.7E-22 8E-27 201.0 25.5 247 178-441 104-388 (402)
37 COG2267 PldB Lysophospholipase 99.9 1.3E-22 2.9E-27 195.2 21.2 260 155-434 13-288 (298)
38 PLN02211 methyl indole-3-aceta 99.9 1.6E-22 3.4E-27 193.6 21.3 232 178-435 17-265 (273)
39 KOG1455 Lysophospholipase [Lip 99.9 6.7E-22 1.5E-26 181.9 21.1 226 178-433 53-302 (313)
40 PLN02980 2-oxoglutarate decarb 99.9 2.3E-22 5E-27 231.7 22.4 254 162-444 1355-1641(1655)
41 PRK14875 acetoin dehydrogenase 99.9 4.5E-22 9.7E-27 199.3 21.8 240 167-441 121-370 (371)
42 PLN02511 hydrolase 99.9 4.4E-22 9.5E-27 199.7 15.1 270 154-442 74-365 (388)
43 COG1647 Esterase/lipase [Gener 99.9 5.7E-21 1.2E-25 167.4 19.6 213 179-434 15-238 (243)
44 TIGR01249 pro_imino_pep_1 prol 99.9 5.8E-21 1.2E-25 186.2 21.4 113 156-278 9-131 (306)
45 TIGR01607 PST-A Plasmodium sub 99.9 7.2E-21 1.6E-25 187.1 20.5 251 157-436 3-329 (332)
46 KOG2382 Predicted alpha/beta h 99.9 1.4E-20 3E-25 176.2 18.0 243 177-441 50-312 (315)
47 PRK13604 luxD acyl transferase 99.9 6.3E-20 1.4E-24 173.8 22.4 256 157-459 15-285 (307)
48 PRK05855 short chain dehydroge 99.8 1.7E-20 3.6E-25 199.2 17.4 268 157-443 8-293 (582)
49 PRK10985 putative hydrolase; P 99.8 6.4E-20 1.4E-24 180.1 18.3 253 154-425 34-300 (324)
50 PRK06765 homoserine O-acetyltr 99.8 2.9E-19 6.3E-24 178.1 21.6 272 156-441 30-387 (389)
51 PRK05077 frsA fermentation/res 99.8 2E-18 4.3E-23 174.1 20.8 207 178-436 193-408 (414)
52 TIGR03100 hydr1_PEP hydrolase, 99.8 3.2E-18 7E-23 164.0 20.6 227 179-436 26-271 (274)
53 KOG2984 Predicted hydrolase [G 99.8 2.4E-19 5.3E-24 154.2 10.7 228 167-441 33-275 (277)
54 PF00561 Abhydrolase_1: alpha/ 99.8 1.4E-18 3.1E-23 161.2 15.0 208 206-434 1-229 (230)
55 PRK11071 esterase YqiA; Provis 99.8 4.1E-18 9E-23 153.7 16.2 180 180-435 2-186 (190)
56 PRK10566 esterase; Provisional 99.8 1.9E-17 4.2E-22 156.4 19.7 107 168-274 16-139 (249)
57 TIGR01836 PHA_synth_III_C poly 99.8 2.3E-17 5E-22 163.8 19.4 102 179-280 62-174 (350)
58 PF12695 Abhydrolase_5: Alpha/ 99.8 1.9E-17 4.2E-22 142.5 16.4 143 181-420 1-145 (145)
59 TIGR01838 PHA_synth_I poly(R)- 99.8 7.5E-17 1.6E-21 165.2 21.5 251 164-427 174-462 (532)
60 PLN02872 triacylglycerol lipas 99.7 5.4E-17 1.2E-21 161.8 15.7 274 151-441 44-388 (395)
61 COG0596 MhpC Predicted hydrola 99.7 2.9E-16 6.2E-21 146.9 18.8 247 167-435 12-277 (282)
62 KOG1552 Predicted alpha/beta h 99.7 1.7E-15 3.6E-20 137.2 14.0 179 179-434 60-246 (258)
63 TIGR03101 hydr2_PEP hydrolase, 99.6 6.4E-15 1.4E-19 139.0 14.3 98 179-277 25-134 (266)
64 PRK11460 putative hydrolase; P 99.6 2.3E-14 4.9E-19 133.7 17.9 164 178-434 15-206 (232)
65 COG0429 Predicted hydrolase of 99.6 2.6E-14 5.7E-19 133.8 16.7 247 154-424 52-319 (345)
66 PRK07868 acyl-CoA synthetase; 99.6 4.5E-14 9.8E-19 158.0 22.0 266 164-436 49-357 (994)
67 KOG4391 Predicted alpha/beta h 99.6 4.1E-15 9E-20 129.7 8.7 195 178-441 77-281 (300)
68 COG2021 MET2 Homoserine acetyl 99.6 6.6E-14 1.4E-18 133.3 16.7 257 164-440 35-366 (368)
69 KOG1838 Alpha/beta hydrolase [ 99.6 5.2E-14 1.1E-18 136.6 15.8 252 154-425 96-368 (409)
70 PLN00021 chlorophyllase 99.6 8.6E-14 1.9E-18 134.8 17.3 101 178-278 51-167 (313)
71 COG3208 GrsT Predicted thioest 99.6 3.8E-13 8.3E-18 121.2 19.2 210 178-435 6-231 (244)
72 PLN02442 S-formylglutathione h 99.6 5.3E-13 1.2E-17 128.3 21.7 113 166-278 34-179 (283)
73 TIGR02821 fghA_ester_D S-formy 99.5 3.5E-13 7.6E-18 129.2 19.1 100 178-278 41-174 (275)
74 KOG4667 Predicted esterase [Li 99.5 1.8E-13 4E-18 119.5 14.6 208 179-434 33-252 (269)
75 PF03096 Ndr: Ndr family; Int 99.5 3.9E-13 8.6E-18 125.1 14.1 242 168-440 12-277 (283)
76 PF06342 DUF1057: Alpha/beta h 99.5 5.3E-12 1.1E-16 116.1 21.0 95 179-278 35-138 (297)
77 PF02230 Abhydrolase_2: Phosph 99.5 6.7E-13 1.5E-17 122.6 15.2 169 178-434 13-213 (216)
78 COG1506 DAP2 Dipeptidyl aminop 99.5 4.8E-13 1E-17 142.1 14.9 217 154-434 368-607 (620)
79 PF00326 Peptidase_S9: Prolyl 99.5 3.9E-13 8.4E-18 123.9 12.4 185 195-441 3-208 (213)
80 KOG2931 Differentiation-relate 99.5 4.2E-12 9.1E-17 116.4 18.0 249 156-441 27-305 (326)
81 TIGR01840 esterase_phb esteras 99.5 2.7E-12 5.9E-17 118.1 16.8 100 178-277 12-130 (212)
82 PF06821 Ser_hydrolase: Serine 99.4 1.3E-12 2.9E-17 115.1 12.7 155 182-425 1-158 (171)
83 COG0400 Predicted esterase [Ge 99.4 9E-12 1.9E-16 112.5 15.8 167 177-435 16-204 (207)
84 PF01738 DLH: Dienelactone hyd 99.4 7.7E-12 1.7E-16 115.7 15.1 159 178-427 13-196 (218)
85 PF00975 Thioesterase: Thioest 99.4 5.8E-11 1.3E-15 110.5 20.3 95 180-277 1-104 (229)
86 TIGR03230 lipo_lipase lipoprot 99.4 5.1E-12 1.1E-16 126.2 13.4 100 178-277 40-154 (442)
87 TIGR01839 PHA_synth_II poly(R) 99.4 5E-11 1.1E-15 121.3 19.9 117 164-281 201-332 (560)
88 PF08538 DUF1749: Protein of u 99.4 1.3E-11 2.8E-16 116.2 14.4 100 179-278 33-149 (303)
89 cd00707 Pancreat_lipase_like P 99.3 9E-12 2E-16 119.0 11.5 101 178-278 35-148 (275)
90 PF05448 AXE1: Acetyl xylan es 99.3 1.3E-10 2.9E-15 112.8 19.2 205 178-434 82-318 (320)
91 PF06500 DUF1100: Alpha/beta h 99.3 7.2E-11 1.6E-15 115.8 16.5 212 158-422 172-395 (411)
92 PRK10115 protease 2; Provision 99.3 7E-11 1.5E-15 126.5 16.6 226 156-440 421-673 (686)
93 PRK10162 acetyl esterase; Prov 99.3 1.7E-10 3.8E-15 112.8 17.5 102 178-279 80-197 (318)
94 PF10230 DUF2305: Uncharacteri 99.3 2.5E-09 5.4E-14 101.6 23.8 100 179-278 2-123 (266)
95 TIGR00976 /NonD putative hydro 99.2 9.5E-11 2.1E-15 123.3 14.6 120 158-279 3-134 (550)
96 COG2945 Predicted hydrolase of 99.2 2.3E-10 5.1E-15 98.9 14.0 168 177-440 26-205 (210)
97 PF12740 Chlorophyllase2: Chlo 99.2 1.6E-09 3.4E-14 100.4 17.1 100 179-278 17-132 (259)
98 COG0412 Dienelactone hydrolase 99.2 2.3E-09 4.9E-14 99.9 17.5 155 179-425 27-207 (236)
99 TIGR03502 lipase_Pla1_cef extr 99.1 3.6E-10 7.7E-15 119.9 13.5 86 178-263 448-576 (792)
100 TIGR01849 PHB_depoly_PhaZ poly 99.1 3.7E-09 7.9E-14 104.8 19.8 112 165-281 87-212 (406)
101 KOG2565 Predicted hydrolases o 99.1 6.5E-10 1.4E-14 105.0 13.7 143 133-275 102-262 (469)
102 PF05728 UPF0227: Uncharacteri 99.1 2.4E-09 5.2E-14 95.5 16.1 87 182-279 2-93 (187)
103 COG4757 Predicted alpha/beta h 99.1 1.3E-09 2.8E-14 96.8 13.7 245 156-436 10-279 (281)
104 PF02273 Acyl_transf_2: Acyl t 99.1 7.1E-09 1.5E-13 93.0 17.3 235 177-460 28-279 (294)
105 COG3545 Predicted esterase of 99.1 2.9E-09 6.2E-14 91.2 14.1 155 180-423 3-159 (181)
106 PRK10252 entF enterobactin syn 99.1 7E-09 1.5E-13 120.5 20.4 96 179-277 1068-1171(1296)
107 KOG2624 Triglyceride lipase-ch 99.0 2.2E-09 4.7E-14 106.1 13.0 125 151-278 48-200 (403)
108 COG3458 Acetyl esterase (deace 99.0 3.7E-09 8E-14 96.2 12.4 191 178-423 82-303 (321)
109 PF07859 Abhydrolase_3: alpha/ 99.0 1.9E-09 4E-14 99.0 10.5 98 182-279 1-112 (211)
110 PF07819 PGAP1: PGAP1-like pro 99.0 4.7E-09 1E-13 97.0 12.0 100 178-277 3-123 (225)
111 PF10503 Esterase_phd: Esteras 99.0 5E-08 1.1E-12 89.2 18.2 110 168-277 5-132 (220)
112 PTZ00472 serine carboxypeptida 98.9 1.1E-07 2.3E-12 97.4 20.7 103 177-279 75-218 (462)
113 COG3571 Predicted hydrolase of 98.9 1.1E-07 2.4E-12 79.7 15.2 153 179-421 14-182 (213)
114 COG3243 PhaC Poly(3-hydroxyalk 98.9 4.3E-08 9.3E-13 95.1 14.5 237 178-425 106-375 (445)
115 PF03959 FSH1: Serine hydrolas 98.9 1.4E-08 3.1E-13 93.2 11.0 156 178-426 3-207 (212)
116 PF09752 DUF2048: Uncharacteri 98.9 1.5E-07 3.3E-12 90.2 17.3 232 178-435 91-344 (348)
117 PF03403 PAF-AH_p_II: Platelet 98.9 1.8E-08 4E-13 100.2 11.5 99 178-277 99-262 (379)
118 PF12146 Hydrolase_4: Putative 98.8 9E-09 1.9E-13 78.3 7.0 56 178-233 15-79 (79)
119 PF08840 BAAT_C: BAAT / Acyl-C 98.8 9.9E-09 2.1E-13 94.2 8.7 49 374-422 110-164 (213)
120 PF02129 Peptidase_S15: X-Pro 98.8 1.3E-07 2.7E-12 90.6 15.5 104 178-281 19-140 (272)
121 COG0657 Aes Esterase/lipase [L 98.8 2.4E-07 5.2E-12 90.5 16.8 105 177-281 77-195 (312)
122 KOG4627 Kynurenine formamidase 98.8 2.6E-08 5.7E-13 86.9 8.2 179 178-424 66-251 (270)
123 PF07224 Chlorophyllase: Chlor 98.8 2.6E-07 5.6E-12 84.1 14.7 114 163-280 34-160 (307)
124 COG3319 Thioesterase domains o 98.8 6E-08 1.3E-12 90.5 10.7 96 180-278 1-104 (257)
125 KOG3043 Predicted hydrolase re 98.7 7.7E-08 1.7E-12 85.5 10.0 150 180-423 40-212 (242)
126 PF06028 DUF915: Alpha/beta hy 98.7 1.7E-07 3.8E-12 87.6 13.0 99 179-277 11-143 (255)
127 KOG2112 Lysophospholipase [Lip 98.7 2.6E-07 5.6E-12 81.7 12.8 168 180-434 4-202 (206)
128 KOG3975 Uncharacterized conser 98.7 2.2E-06 4.8E-11 77.3 18.3 236 178-434 28-297 (301)
129 COG4188 Predicted dienelactone 98.7 1.2E-07 2.7E-12 91.1 10.8 199 178-429 70-303 (365)
130 KOG1515 Arylacetamide deacetyl 98.7 2E-06 4.3E-11 83.5 18.6 104 177-280 88-210 (336)
131 PRK05371 x-prolyl-dipeptidyl a 98.7 6.4E-07 1.4E-11 97.0 16.5 80 199-278 272-374 (767)
132 KOG2551 Phospholipase/carboxyh 98.6 8.2E-07 1.8E-11 79.1 14.1 55 376-434 160-214 (230)
133 PRK04940 hypothetical protein; 98.6 2.2E-06 4.7E-11 75.1 16.4 90 182-279 2-94 (180)
134 PF06057 VirJ: Bacterial virul 98.6 5.4E-07 1.2E-11 79.1 12.5 97 181-277 4-107 (192)
135 KOG2100 Dipeptidyl aminopeptid 98.6 7.2E-07 1.6E-11 96.3 15.9 189 177-434 524-741 (755)
136 smart00824 PKS_TE Thioesterase 98.6 1.8E-06 3.9E-11 78.5 15.4 91 184-277 2-102 (212)
137 KOG3847 Phospholipase A2 (plat 98.5 1.1E-06 2.3E-11 81.8 10.3 97 178-275 117-273 (399)
138 PF05990 DUF900: Alpha/beta hy 98.5 1.9E-06 4.1E-11 80.2 12.0 100 178-277 17-137 (233)
139 PF01674 Lipase_2: Lipase (cla 98.5 5.3E-07 1.2E-11 82.3 7.9 82 181-263 3-96 (219)
140 PLN02733 phosphatidylcholine-s 98.5 5.3E-07 1.1E-11 91.0 8.6 89 189-277 104-201 (440)
141 PF11339 DUF3141: Protein of u 98.4 3.3E-05 7.1E-10 77.2 20.1 82 198-280 93-178 (581)
142 PF00151 Lipase: Lipase; Inte 98.4 7.5E-07 1.6E-11 87.0 8.6 102 177-278 69-188 (331)
143 PF03583 LIP: Secretory lipase 98.3 8.6E-05 1.9E-09 71.5 18.6 80 198-277 19-113 (290)
144 KOG3253 Predicted alpha/beta h 98.3 9.8E-06 2.1E-10 81.6 11.9 163 177-424 174-349 (784)
145 PF00450 Peptidase_S10: Serine 98.2 5.4E-05 1.2E-09 77.0 16.7 104 176-279 37-183 (415)
146 COG4099 Predicted peptidase [G 98.2 2E-05 4.2E-10 73.1 11.8 114 160-275 170-302 (387)
147 KOG1553 Predicted alpha/beta h 98.2 6E-06 1.3E-10 77.8 8.6 93 179-275 243-343 (517)
148 KOG2281 Dipeptidyl aminopeptid 98.2 4.2E-05 9E-10 77.7 14.5 99 177-277 640-762 (867)
149 PF04301 DUF452: Protein of un 98.1 9.3E-05 2E-09 66.9 14.4 79 179-277 11-90 (213)
150 PF05677 DUF818: Chlamydia CHL 98.1 8.8E-05 1.9E-09 70.7 14.8 86 178-263 136-236 (365)
151 KOG4840 Predicted hydrolases o 98.1 3.6E-05 7.7E-10 68.4 10.8 100 180-279 37-146 (299)
152 PF05057 DUF676: Putative seri 98.1 9.8E-06 2.1E-10 74.7 7.7 84 178-261 3-97 (217)
153 COG4782 Uncharacterized protei 98.0 3.2E-05 7E-10 74.1 10.4 100 178-277 115-234 (377)
154 PRK10439 enterobactin/ferric e 98.0 0.00028 6.1E-09 71.3 17.4 113 165-277 195-323 (411)
155 COG4814 Uncharacterized protei 98.0 4.4E-05 9.6E-10 69.3 9.6 98 180-277 46-176 (288)
156 COG3509 LpqC Poly(3-hydroxybut 98.0 7.3E-05 1.6E-09 69.8 11.1 117 160-277 43-179 (312)
157 PF05705 DUF829: Eukaryotic pr 98.0 0.00044 9.6E-09 64.8 16.4 61 376-439 175-240 (240)
158 COG1075 LipA Predicted acetylt 97.9 2.5E-05 5.4E-10 76.8 7.9 99 179-277 59-164 (336)
159 PLN02606 palmitoyl-protein thi 97.9 0.00047 1E-08 65.3 15.6 96 179-277 26-132 (306)
160 PF12715 Abhydrolase_7: Abhydr 97.9 4.6E-05 9.9E-10 74.2 8.7 97 178-275 114-258 (390)
161 COG3150 Predicted esterase [Ge 97.8 0.0003 6.6E-09 59.9 11.6 86 182-278 2-92 (191)
162 PF00756 Esterase: Putative es 97.8 3.7E-05 7.9E-10 72.5 6.8 111 168-279 12-152 (251)
163 PF10340 DUF2424: Protein of u 97.8 0.00034 7.3E-09 68.6 12.6 115 165-280 108-238 (374)
164 PF05577 Peptidase_S28: Serine 97.7 0.00027 5.9E-09 72.4 11.3 99 178-277 28-148 (434)
165 KOG3724 Negative regulator of 97.6 0.00035 7.5E-09 72.9 10.3 99 178-277 88-220 (973)
166 PF02089 Palm_thioest: Palmito 97.5 0.003 6.5E-08 59.5 14.8 96 179-277 5-116 (279)
167 COG1770 PtrB Protease II [Amin 97.5 0.00098 2.1E-08 68.7 12.2 203 178-439 447-675 (682)
168 COG2936 Predicted acyl esteras 97.5 0.0016 3.5E-08 66.9 13.5 127 150-278 18-160 (563)
169 KOG1551 Uncharacterized conser 97.5 0.0029 6.3E-08 58.0 13.3 59 382-444 309-368 (371)
170 KOG2237 Predicted serine prote 97.4 0.00078 1.7E-08 69.0 9.2 126 148-277 438-584 (712)
171 PF12048 DUF3530: Protein of u 97.4 0.0023 5E-08 62.2 12.0 98 179-277 87-229 (310)
172 PLN02633 palmitoyl protein thi 97.4 0.0071 1.5E-07 57.5 14.7 96 179-277 25-131 (314)
173 PF08386 Abhydrolase_4: TAP-li 97.3 0.00052 1.1E-08 55.1 6.0 60 379-441 34-93 (103)
174 PF02450 LCAT: Lecithin:choles 97.3 0.00087 1.9E-08 67.4 8.6 82 194-277 66-160 (389)
175 KOG1282 Serine carboxypeptidas 97.3 0.027 6E-07 57.0 19.1 108 171-279 65-215 (454)
176 PF11144 DUF2920: Protein of u 97.3 0.0063 1.4E-07 60.0 13.8 36 242-277 184-219 (403)
177 KOG3101 Esterase D [General fu 97.2 0.0023 5E-08 56.7 9.1 107 178-284 43-183 (283)
178 cd00741 Lipase Lipase. Lipase 97.2 0.001 2.2E-08 57.6 6.9 56 222-277 8-67 (153)
179 PLN03016 sinapoylglucose-malat 97.2 0.082 1.8E-06 53.8 21.2 103 176-278 63-211 (433)
180 PF10142 PhoPQ_related: PhoPQ- 97.1 0.0022 4.8E-08 63.1 9.3 60 376-441 259-319 (367)
181 KOG2183 Prolylcarboxypeptidase 97.1 0.0021 4.6E-08 62.6 8.3 97 180-276 81-201 (492)
182 cd00312 Esterase_lipase Estera 97.0 0.0014 2.9E-08 68.4 6.7 98 177-277 93-213 (493)
183 COG1073 Hydrolases of the alph 96.7 0.02 4.3E-07 54.6 12.2 51 376-427 228-281 (299)
184 KOG1202 Animal-type fatty acid 96.7 0.036 7.7E-07 60.8 14.2 88 178-277 2122-2219(2376)
185 PF06259 Abhydrolase_8: Alpha/ 96.7 0.031 6.8E-07 49.3 11.7 106 172-277 12-144 (177)
186 PF07082 DUF1350: Protein of u 96.7 0.03 6.4E-07 51.6 11.8 95 180-274 18-122 (250)
187 KOG2541 Palmitoyl protein thio 96.7 0.014 3.1E-07 53.9 9.6 95 180-277 24-128 (296)
188 cd00519 Lipase_3 Lipase (class 96.4 0.0065 1.4E-07 56.4 6.2 56 221-276 107-167 (229)
189 PF01764 Lipase_3: Lipase (cla 96.4 0.0061 1.3E-07 51.6 5.5 37 226-262 48-84 (140)
190 KOG2182 Hydrolytic enzymes of 96.3 0.038 8.1E-07 55.6 10.8 98 178-277 85-207 (514)
191 COG2819 Predicted hydrolase of 96.2 0.035 7.6E-07 51.7 9.5 37 241-277 136-172 (264)
192 PF01083 Cutinase: Cutinase; 96.1 0.026 5.6E-07 50.2 8.1 85 193-277 25-122 (179)
193 KOG3967 Uncharacterized conser 96.0 0.067 1.5E-06 47.7 9.6 101 179-279 101-229 (297)
194 KOG2369 Lecithin:cholesterol a 95.9 0.018 3.8E-07 57.6 6.6 84 193-276 124-224 (473)
195 COG1505 Serine proteases of th 95.9 0.042 9.1E-07 56.4 9.3 113 157-275 400-533 (648)
196 COG0627 Predicted esterase [Ge 95.8 0.035 7.6E-07 53.8 8.0 38 243-280 153-190 (316)
197 PLN02517 phosphatidylcholine-s 95.8 0.016 3.5E-07 59.8 5.6 84 194-277 157-263 (642)
198 PF11187 DUF2974: Protein of u 95.7 0.038 8.1E-07 51.0 7.4 82 179-276 37-122 (224)
199 COG2272 PnbA Carboxylesterase 95.4 0.046 1E-06 55.1 7.2 101 176-278 91-218 (491)
200 PLN02209 serine carboxypeptida 95.4 0.13 2.8E-06 52.5 10.5 114 166-279 55-214 (437)
201 COG3946 VirJ Type IV secretory 95.3 0.049 1.1E-06 53.3 7.0 87 179-265 260-349 (456)
202 PLN02162 triacylglycerol lipas 95.0 0.067 1.5E-06 53.8 7.1 33 229-261 265-297 (475)
203 PLN02454 triacylglycerol lipas 94.9 0.091 2E-06 52.4 7.7 39 224-262 208-248 (414)
204 PLN00413 triacylglycerol lipas 94.6 0.099 2.2E-06 52.8 7.2 34 224-261 270-303 (479)
205 PLN02310 triacylglycerol lipas 94.4 0.11 2.4E-06 51.7 7.0 41 222-262 189-229 (405)
206 PLN02571 triacylglycerol lipas 94.0 0.083 1.8E-06 52.7 5.2 37 222-262 208-246 (413)
207 PLN02934 triacylglycerol lipas 93.8 0.095 2.1E-06 53.3 5.2 34 224-261 307-340 (515)
208 PF06441 EHN: Epoxide hydrolas 93.7 0.06 1.3E-06 43.7 2.9 65 131-198 46-111 (112)
209 PLN03037 lipase class 3 family 93.6 0.1 2.2E-06 53.2 5.1 40 223-262 299-338 (525)
210 COG2830 Uncharacterized protei 93.5 0.88 1.9E-05 38.9 9.6 77 181-277 13-90 (214)
211 PF11288 DUF3089: Protein of u 93.4 0.17 3.7E-06 45.7 5.6 40 221-263 77-116 (207)
212 PF05277 DUF726: Protein of un 93.4 0.11 2.4E-06 50.9 4.7 47 239-285 217-268 (345)
213 PF04083 Abhydro_lipase: Parti 93.3 0.062 1.3E-06 38.6 2.2 48 149-196 10-60 (63)
214 PLN02408 phospholipase A1 93.3 0.14 3E-06 50.5 5.2 21 242-262 200-220 (365)
215 PF00135 COesterase: Carboxyle 93.2 0.33 7.1E-06 51.0 8.5 99 178-277 124-245 (535)
216 PLN02847 triacylglycerol lipas 92.7 0.57 1.2E-05 48.7 8.8 39 224-262 233-271 (633)
217 PLN02324 triacylglycerol lipas 92.5 0.2 4.4E-06 49.9 5.3 35 224-262 199-235 (415)
218 COG2939 Carboxypeptidase C (ca 92.4 0.51 1.1E-05 47.9 7.9 102 176-277 98-236 (498)
219 PLN02802 triacylglycerol lipas 91.7 0.28 6.1E-06 50.0 5.2 21 242-262 330-350 (509)
220 PLN02753 triacylglycerol lipas 91.7 0.27 5.9E-06 50.3 5.1 22 241-262 311-332 (531)
221 KOG1283 Serine carboxypeptidas 91.2 1.4 3E-05 42.1 8.8 115 164-279 17-168 (414)
222 PLN02761 lipase class 3 family 91.1 0.33 7.2E-06 49.6 5.1 21 241-261 293-313 (527)
223 PLN02719 triacylglycerol lipas 90.9 0.36 7.8E-06 49.3 5.1 21 242-262 298-318 (518)
224 KOG4372 Predicted alpha/beta h 90.4 0.29 6.2E-06 48.3 3.8 78 177-258 78-166 (405)
225 TIGR03712 acc_sec_asp2 accesso 90.3 7.8 0.00017 39.5 13.7 102 166-275 278-388 (511)
226 PLN02213 sinapoylglucose-malat 89.7 1.1 2.5E-05 43.7 7.5 74 206-279 2-98 (319)
227 KOG4569 Predicted lipase [Lipi 89.1 1 2.3E-05 44.3 6.7 37 222-262 155-191 (336)
228 COG2382 Fes Enterochelin ester 88.7 0.61 1.3E-05 44.3 4.5 101 176-277 95-212 (299)
229 KOG4540 Putative lipase essent 88.5 0.85 1.8E-05 42.7 5.1 51 223-275 257-307 (425)
230 COG5153 CVT17 Putative lipase 88.5 0.85 1.8E-05 42.7 5.1 51 223-275 257-307 (425)
231 KOG1516 Carboxylesterase and r 85.3 1.7 3.7E-05 45.9 6.2 99 179-277 112-232 (545)
232 COG4947 Uncharacterized protei 85.3 3.6 7.9E-05 35.7 6.8 35 243-277 102-136 (227)
233 COG4553 DepA Poly-beta-hydroxy 85.0 36 0.00078 32.4 16.9 97 179-280 103-212 (415)
234 PF05576 Peptidase_S37: PS-10 83.4 1.7 3.7E-05 43.2 4.6 96 178-275 62-168 (448)
235 COG4287 PqaA PhoPQ-activated p 82.3 1.6 3.4E-05 42.6 3.8 47 376-423 326-373 (507)
236 KOG2521 Uncharacterized conser 82.2 20 0.00044 35.3 11.5 61 378-441 224-289 (350)
237 PF08237 PE-PPE: PE-PPE domain 82.0 5.5 0.00012 36.7 7.3 41 221-263 29-69 (225)
238 KOG2029 Uncharacterized conser 78.5 2.8 6.1E-05 43.5 4.4 36 226-261 508-545 (697)
239 PLN02213 sinapoylglucose-malat 78.4 5.6 0.00012 38.9 6.5 58 379-440 233-315 (319)
240 PF07519 Tannase: Tannase and 75.2 4.4 9.6E-05 41.9 5.0 79 198-278 52-151 (474)
241 PF09949 DUF2183: Uncharacteri 72.0 33 0.00071 27.2 8.1 64 205-272 24-97 (100)
242 KOG4388 Hormone-sensitive lipa 71.9 13 0.00027 38.8 7.0 100 180-279 397-510 (880)
243 PLN02209 serine carboxypeptida 67.5 15 0.00032 37.7 6.6 55 379-435 351-430 (437)
244 KOG2385 Uncharacterized conser 65.3 12 0.00025 38.4 5.1 47 239-285 444-495 (633)
245 COG1448 TyrB Aspartate/tyrosin 64.6 22 0.00047 35.2 6.7 83 180-275 172-263 (396)
246 PRK12467 peptide synthase; Pro 59.9 25 0.00055 46.6 8.2 93 179-274 3692-3792(3956)
247 PF03283 PAE: Pectinacetyleste 55.8 47 0.001 33.1 7.6 39 241-279 155-197 (361)
248 PF06850 PHB_depo_C: PHB de-po 55.6 15 0.00033 32.8 3.7 47 379-426 134-185 (202)
249 PF06309 Torsin: Torsin; Inte 54.3 65 0.0014 26.7 6.9 59 177-237 50-118 (127)
250 PF06792 UPF0261: Uncharacteri 51.6 1.8E+02 0.004 29.3 10.9 93 180-272 2-125 (403)
251 cd01714 ETF_beta The electron 51.1 43 0.00093 30.2 6.1 53 206-263 78-134 (202)
252 COG3673 Uncharacterized conser 49.1 1.7E+02 0.0036 28.6 9.6 85 178-262 30-142 (423)
253 PRK02399 hypothetical protein; 46.7 2.9E+02 0.0062 27.9 11.3 94 180-273 4-128 (406)
254 PF09994 DUF2235: Uncharacteri 36.3 99 0.0022 29.4 6.3 24 239-262 89-112 (277)
255 PF11770 GAPT: GRB2-binding ad 35.8 37 0.0008 28.7 2.8 19 34-52 9-27 (158)
256 PF07519 Tannase: Tannase and 34.0 50 0.0011 34.2 4.1 61 375-436 349-423 (474)
257 PF14606 Lipase_GDSL_3: GDSL-l 33.1 49 0.0011 29.2 3.4 29 220-248 72-100 (178)
258 PHA02655 hypothetical protein; 29.9 26 0.00056 25.3 0.9 17 38-54 67-83 (94)
259 KOG1752 Glutaredoxin and relat 29.1 3E+02 0.0064 21.9 7.4 78 178-263 13-90 (104)
260 PF05576 Peptidase_S37: PS-10 28.9 81 0.0018 31.8 4.4 56 378-436 350-410 (448)
261 PF03610 EIIA-man: PTS system 28.4 3.1E+02 0.0067 21.9 8.5 75 181-262 2-78 (116)
262 COG1576 Uncharacterized conser 27.8 1.7E+02 0.0037 25.1 5.6 58 196-259 58-115 (155)
263 cd07213 Pat17_PNPLA8_PNPLA9_li 27.3 1.7E+02 0.0037 27.9 6.4 19 245-263 37-55 (288)
264 cd07225 Pat_PNPLA6_PNPLA7 Pata 26.1 2.3E+02 0.0051 27.4 7.1 21 243-263 44-64 (306)
265 PF08484 Methyltransf_14: C-me 25.4 2E+02 0.0043 24.9 5.8 52 222-275 51-102 (160)
266 TIGR03131 malonate_mdcH malona 25.3 88 0.0019 29.9 4.0 21 240-260 74-94 (295)
267 PF10081 Abhydrolase_9: Alpha/ 24.8 1.3E+02 0.0028 28.8 4.7 36 242-277 109-147 (289)
268 PF00698 Acyl_transf_1: Acyl t 24.7 58 0.0013 31.6 2.7 22 239-260 81-102 (318)
269 PF01012 ETF: Electron transfe 24.4 2.5E+02 0.0055 24.0 6.4 59 200-263 52-113 (164)
270 TIGR03707 PPK2_P_aer polyphosp 24.3 1.1E+02 0.0024 28.3 4.2 68 179-254 30-101 (230)
271 smart00827 PKS_AT Acyl transfe 24.2 92 0.002 29.7 3.9 22 239-260 79-100 (298)
272 PRK03482 phosphoglycerate muta 24.2 2.2E+02 0.0047 25.7 6.2 42 217-260 118-159 (215)
273 COG0529 CysC Adenylylsulfate k 24.0 5.2E+02 0.011 23.1 8.2 35 178-212 21-58 (197)
274 COG3887 Predicted signaling pr 23.5 1.8E+02 0.0039 30.8 5.8 96 179-277 258-378 (655)
275 COG5023 Tubulin [Cytoskeleton] 23.4 1.9E+02 0.0042 28.7 5.7 57 221-277 109-173 (443)
276 TIGR03709 PPK2_rel_1 polyphosp 22.7 1.2E+02 0.0025 28.8 4.1 66 179-252 55-124 (264)
277 KOG3086 Predicted dioxygenase 22.7 2E+02 0.0044 26.7 5.4 60 220-279 18-81 (296)
278 cd07227 Pat_Fungal_NTE1 Fungal 21.7 1.1E+02 0.0024 29.0 3.8 21 243-263 39-59 (269)
279 PRK02910 light-independent pro 21.6 2.9E+02 0.0063 29.0 7.3 60 194-253 103-170 (519)
280 COG0031 CysK Cysteine synthase 21.4 7.5E+02 0.016 23.9 10.9 86 181-275 172-291 (300)
281 PRK05282 (alpha)-aspartyl dipe 21.2 2.9E+02 0.0064 25.5 6.4 36 179-214 31-70 (233)
282 COG2939 Carboxypeptidase C (ca 21.1 82 0.0018 32.5 2.9 60 379-439 425-490 (498)
283 cd07198 Patatin Patatin-like p 20.8 1.5E+02 0.0031 25.8 4.2 21 243-263 27-47 (172)
284 PF10605 3HBOH: 3HB-oligomer h 20.8 76 0.0016 33.5 2.6 43 379-421 555-604 (690)
285 PRK14194 bifunctional 5,10-met 20.8 1.5E+02 0.0033 28.6 4.5 42 222-263 140-183 (301)
286 PF03976 PPK2: Polyphosphate k 20.8 75 0.0016 29.4 2.4 36 179-214 30-68 (228)
287 KOG0341 DEAD-box protein abstr 20.8 1.7E+02 0.0038 29.1 4.8 78 380-458 446-531 (610)
288 PRK11613 folP dihydropteroate 20.6 5E+02 0.011 24.8 8.0 49 203-256 174-225 (282)
289 PF00004 AAA: ATPase family as 20.3 2.6E+02 0.0057 22.2 5.5 51 183-235 1-53 (132)
290 PF02882 THF_DHG_CYH_C: Tetrah 20.1 2E+02 0.0044 24.9 4.8 41 222-262 17-59 (160)
291 TIGR00128 fabD malonyl CoA-acy 20.1 1.2E+02 0.0026 28.7 3.8 21 241-261 82-102 (290)
No 1
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.96 E-value=1.4e-27 Score=231.42 Aligned_cols=255 Identities=18% Similarity=0.146 Sum_probs=159.6
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC--------------hHHHHHHHHHHH
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP--------------FEGLVKFVEETV 232 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss--------------~~~~~~dl~~~i 232 (468)
++|...|. ++|+|||+||++++...|..+++.|++.|+|+++|+||||.|+ ++++++++.+++
T Consensus 20 i~y~~~G~---~~~~vlllHG~~~~~~~w~~~~~~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l 96 (294)
T PLN02824 20 IRYQRAGT---SGPALVLVHGFGGNADHWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFC 96 (294)
T ss_pred EEEEEcCC---CCCeEEEECCCCCChhHHHHHHHHHHhCCeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHH
Confidence 45666664 2579999999999999999999999888999999999999873 578899999999
Q ss_pred HHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCC-CCcCcc-hHHHhhCchhHHh-hH-HHHhhh
Q 012190 233 RREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGR-SQLQPL-FPILKAMPDELHC-AV-PYLLSY 308 (468)
Q Consensus 233 ~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~-~~~~~~-~~~~~~~~~~~~~-~~-~~~~~~ 308 (468)
+++. .++++|+||||||.+++.+|.++|++|+++|++++...... ...... .+....+...+.. .. ..++..
T Consensus 97 ~~l~----~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (294)
T PLN02824 97 SDVV----GDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKS 172 (294)
T ss_pred HHhc----CCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHh
Confidence 9853 46899999999999999999999999999999998542111 100000 0111100000000 00 000000
Q ss_pred hcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHh-HHHhhhcccCCceEEEEEe
Q 012190 309 VMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSAS-AYANSRLHAVKAEVLVLAS 387 (468)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~l~~i~~PvLlI~G 387 (468)
............... .+.....+...+.+.. ..............+.... ......+.++++|+|+|+|
T Consensus 173 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G 242 (294)
T PLN02824 173 VATPETVKNILCQCY-HDDSAVTDELVEAILR---------PGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWG 242 (294)
T ss_pred hcCHHHHHHHHHHhc-cChhhccHHHHHHHHh---------ccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEe
Confidence 000000000000000 0000000111110000 0000111111111111000 0113456889999999999
Q ss_pred CCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 388 GKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 388 ~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
++|.+++.+ ..+.+.+..+++++++++++||++++|+|+++++.|. +|+.+
T Consensus 243 ~~D~~~~~~-~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl~~ 293 (294)
T PLN02824 243 EKDPWEPVE-LGRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIE--SFVAR 293 (294)
T ss_pred cCCCCCChH-HHHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHH--HHHhc
Confidence 999999998 6888888888899999999999999999999999999 66654
No 2
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.96 E-value=9.1e-28 Score=228.00 Aligned_cols=242 Identities=16% Similarity=0.200 Sum_probs=151.1
Q ss_pred eecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC------hHHHHHHHHHHHHHHhhcCCC
Q 012190 168 CPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP------FEGLVKFVEETVRREHASSPE 241 (468)
Q Consensus 168 ~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss------~~~~~~dl~~~i~~~~~~~~~ 241 (468)
+|...|+ +.|+|||+||++++...|..+++.|.+.|+|+++|+||||.|+ ++++++++. + ...
T Consensus 5 ~y~~~G~---g~~~ivllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~l~----~----~~~ 73 (256)
T PRK10349 5 WWQTKGQ---GNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALSLADMAEAVL----Q----QAP 73 (256)
T ss_pred chhhcCC---CCCeEEEECCCCCChhHHHHHHHHHhcCCEEEEecCCCCCCCCCCCCCCHHHHHHHHH----h----cCC
Confidence 4555665 3457999999999999999999999888999999999999883 444444433 2 234
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCC-CcCcch-HHHhhCchhHHhhHHHHhhhhcCChhhHHHH
Q 012190 242 KPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRS-QLQPLF-PILKAMPDELHCAVPYLLSYVMGDPIKMAMV 319 (468)
Q Consensus 242 ~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (468)
++++|+||||||.+|+.+|.++|++++++|++++....... .+.... .........+..........+.. .
T Consensus 74 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--- 146 (256)
T PRK10349 74 DKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLA----L--- 146 (256)
T ss_pred CCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHH----H---
Confidence 68999999999999999999999999999999885443211 111100 00000000000000000000000 0
Q ss_pred hhccCCChhHHhhhhhhhcchhcchhhhhhccCC-cchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHH
Q 012190 320 NIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIP-KDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDE 398 (468)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~ 398 (468)
..............+...+. ....+ ...+......+.. ......+.++++|+|+|+|++|.++|.+ .
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~--~~~~~~l~~i~~P~lii~G~~D~~~~~~-~ 214 (256)
T PRK10349 147 QTMGTETARQDARALKKTVL---------ALPMPEVDVLNGGLEILKT--VDLRQPLQNVSMPFLRLYGYLDGLVPRK-V 214 (256)
T ss_pred HHccCchHHHHHHHHHHHhh---------ccCCCcHHHHHHHHHHHHh--CccHHHHhhcCCCeEEEecCCCccCCHH-H
Confidence 00000000000001100000 00000 0111111111111 1234567889999999999999999998 6
Q ss_pred HHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 399 AKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 399 ~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
.+.+.+.++++++++++++||++++|+|+.|++.|. +|-+|
T Consensus 215 ~~~~~~~i~~~~~~~i~~~gH~~~~e~p~~f~~~l~--~~~~~ 255 (256)
T PRK10349 215 VPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLV--ALKQR 255 (256)
T ss_pred HHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHH--HHhcc
Confidence 899999999999999999999999999999999999 55443
No 3
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.95 E-value=3.2e-27 Score=226.85 Aligned_cols=239 Identities=22% Similarity=0.243 Sum_probs=156.8
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeC
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS 250 (468)
++++|||+||++++...|.++++.|.+.|+|+++|+||||.| +++++++++.++++++. .++++|+|||
T Consensus 24 ~~~plvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~l~----~~~~~LvG~S 99 (276)
T TIGR02240 24 GLTPLLIFNGIGANLELVFPFIEALDPDLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDYLD----YGQVNAIGVS 99 (276)
T ss_pred CCCcEEEEeCCCcchHHHHHHHHHhccCceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhC----cCceEEEEEC
Confidence 457899999999999999999999988999999999999998 37899999999999853 4589999999
Q ss_pred hhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHH
Q 012190 251 FGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIK 330 (468)
Q Consensus 251 ~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (468)
|||.+++.+|.++|++|+++|+++++.......... ........... .. ....................+. .
T Consensus 100 ~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~--~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~-~ 171 (276)
T TIGR02240 100 WGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKP--KVLMMMASPRR-YI----QPSHGIHIAPDIYGGAFRRDPE-L 171 (276)
T ss_pred HHHHHHHHHHHHCHHHhhheEEeccCCccccCCCch--hHHHHhcCchh-hh----ccccccchhhhhccceeeccch-h
Confidence 999999999999999999999999876432111100 00000000000 00 0000000000000000000000 0
Q ss_pred hhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcE
Q 012190 331 LEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCI 410 (468)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~ 410 (468)
....... ... .......+. ............+.++++|+|+|+|++|++++++ ..+.+.+.+++++
T Consensus 172 ~~~~~~~----------~~~-~~~~~~~~~--~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~-~~~~l~~~~~~~~ 237 (276)
T TIGR02240 172 AMAHASK----------VRS-GGKLGYYWQ--LFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLI-NMRLLAWRIPNAE 237 (276)
T ss_pred hhhhhhh----------ccc-CCCchHHHH--HHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHH-HHHHHHHhCCCCE
Confidence 0000000 000 000001111 1111111112456889999999999999999999 7999999999999
Q ss_pred EEEeCCCCccccccCcHHHHHHHHhcCcccccCCC
Q 012190 411 VRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSRKL 445 (468)
Q Consensus 411 ~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~~~~ 445 (468)
++++++ ||++++|+|+++++.|. +|+.+..+.
T Consensus 238 ~~~i~~-gH~~~~e~p~~~~~~i~--~fl~~~~~~ 269 (276)
T TIGR02240 238 LHIIDD-GHLFLITRAEAVAPIIM--KFLAEERQR 269 (276)
T ss_pred EEEEcC-CCchhhccHHHHHHHHH--HHHHHhhhh
Confidence 999985 99999999999999999 677776554
No 4
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.95 E-value=6.6e-27 Score=226.90 Aligned_cols=255 Identities=13% Similarity=0.091 Sum_probs=156.1
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-------ChHHHHHHHHHHHHHHhhcC
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASS 239 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-------s~~~~~~dl~~~i~~~~~~~ 239 (468)
++|...|. +|+|||+||++++...|..+++.|.+.++|+++|+||||.| +++++++++.++++++
T Consensus 19 i~y~~~G~----g~~vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~l---- 90 (295)
T PRK03592 19 MAYIETGE----GDPIVFLHGNPTSSYLWRNIIPHLAGLGRCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDAL---- 90 (295)
T ss_pred EEEEEeCC----CCEEEEECCCCCCHHHHHHHHHHHhhCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----
Confidence 45666665 67999999999999999999999988889999999999998 4788999999999985
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCC-CcCc-chHHHhhCchhH-Hh-hH---HHHhhhhcCC
Q 012190 240 PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRS-QLQP-LFPILKAMPDEL-HC-AV---PYLLSYVMGD 312 (468)
Q Consensus 240 ~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~-~~~~-~~~~~~~~~~~~-~~-~~---~~~~~~~~~~ 312 (468)
..++++++||||||.+|+.+|.++|++|+++|++++....... .... .......+.... .. .. ..........
T Consensus 91 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (295)
T PRK03592 91 GLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEENVFIERVLPG 170 (295)
T ss_pred CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccchhhHHhhcccC
Confidence 3458999999999999999999999999999999984322110 0000 000000000000 00 00 0000000000
Q ss_pred hhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhh---hccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCC
Q 012190 313 PIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVM---SDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGK 389 (468)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~ 389 (468)
......+++. ...+...+... ...... .............. .........+.++++|+|+|+|++
T Consensus 171 -------~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~i~~P~lii~G~~ 238 (295)
T PRK03592 171 -------SILRPLSDEE-MAVYRRPFPTP-ESRRPTLSWPRELPIDGEPADVV---ALVEEYAQWLATSDVPKLLINAEP 238 (295)
T ss_pred -------cccccCCHHH-HHHHHhhcCCc-hhhhhhhhhhhhcCCCCcchhhH---hhhhHhHHHhccCCCCeEEEeccC
Confidence 0000011110 01111100000 000000 00000000000000 000112345688999999999999
Q ss_pred CCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccccC
Q 012190 390 DNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSR 443 (468)
Q Consensus 390 D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~~ 443 (468)
|.++++....+.+.+..+++++++++++||++++|+|+++++.|. .|+.+..
T Consensus 239 D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~--~fl~~~~ 290 (295)
T PRK03592 239 GAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIA--AWLRRLR 290 (295)
T ss_pred CcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHH--HHHHHhc
Confidence 999965523344455678899999999999999999999999999 6776543
No 5
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.95 E-value=3.1e-26 Score=222.95 Aligned_cols=246 Identities=18% Similarity=0.174 Sum_probs=155.6
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhc-CCeEEEEecCCCCCCCC---------hHHHHHHHHHHHHHHh
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRTP---------FEGLVKFVEETVRREH 236 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~-~~~~V~~~D~~G~G~Ss---------~~~~~~dl~~~i~~~~ 236 (468)
++|.+.|.+ ++|+|||+||++++...|..+++.|. ++|+|+++|+||||.|+ ++++++++.++++++
T Consensus 36 i~y~~~G~~--~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l- 112 (302)
T PRK00870 36 MHYVDEGPA--DGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQL- 112 (302)
T ss_pred EEEEecCCC--CCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc-
Confidence 567777753 46899999999999999999999996 57999999999999883 578889999999874
Q ss_pred hcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHH-hhHHHHhhhhcCChhh
Q 012190 237 ASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELH-CAVPYLLSYVMGDPIK 315 (468)
Q Consensus 237 ~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 315 (468)
+.++++|+||||||.+|+.+|.++|++|.++|++++........................ ......+.....
T Consensus 113 ---~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 185 (302)
T PRK00870 113 ---DLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQYSPVLPVGRLVNGGTV---- 185 (302)
T ss_pred ---CCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhcccccCchhhHHHHhhcccc----
Confidence 455899999999999999999999999999999987532211100000000000000000 000000000000
Q ss_pred HHHHhhccCCChhHHhhhhhhhcch-----hcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCC
Q 012190 316 MAMVNIENRLPPRIKLEQLSNNLPA-----LLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKD 390 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D 390 (468)
.....+ ....+...... .......+........... ........+.++++|+++|+|++|
T Consensus 186 -------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~i~~P~lii~G~~D 250 (302)
T PRK00870 186 -------RDLSDA-VRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVA-------ANRAAWAVLERWDKPFLTAFSDSD 250 (302)
T ss_pred -------ccCCHH-HHHHhhcccCChhhhcchhhhhhcCCCCCCCcchH-------HHHHHHHhhhcCCCceEEEecCCC
Confidence 000000 01111000000 0000000000000000000 011112456889999999999999
Q ss_pred CCCCcHHHHHHHHHhCCCcE---EEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 391 NMLPSEDEAKRLNNSLQNCI---VRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 391 ~~v~~~~~~~~l~~~l~~~~---~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
.+++.. . +.+.+.+++++ +++++++||++++|+|+++++.|. .|+++
T Consensus 251 ~~~~~~-~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~--~fl~~ 300 (302)
T PRK00870 251 PITGGG-D-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVL--EFIRA 300 (302)
T ss_pred CcccCc-h-HHHHhhcccccccceeeecCCCccchhhChHHHHHHHH--HHHhc
Confidence 999987 4 88999998776 889999999999999999999999 55543
No 6
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.95 E-value=1.4e-26 Score=218.53 Aligned_cols=243 Identities=19% Similarity=0.213 Sum_probs=155.5
Q ss_pred ecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC--------ChHHHHHHHHHHHHHHhhcCC
Q 012190 169 PVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSP 240 (468)
Q Consensus 169 y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~~~~~~~~ 240 (468)
|...|.+.+++|+|||+||++++...|...++.|.++|+|+++|+||||.| +++++++++.++++++ .
T Consensus 3 ~~~~~~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~----~ 78 (257)
T TIGR03611 3 YELHGPPDADAPVVVLSSGLGGSGSYWAPQLDVLTQRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL----N 78 (257)
T ss_pred EEEecCCCCCCCEEEEEcCCCcchhHHHHHHHHHHhccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh----C
Confidence 344454444688999999999999999999999988999999999999988 4788899999999874 3
Q ss_pred CCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHh
Q 012190 241 EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVN 320 (468)
Q Consensus 241 ~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (468)
.++++++||||||.+|+.+|+++|+.++++|++++......... ...... ..++..............
T Consensus 79 ~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~----~~~~~~--------~~~~~~~~~~~~~~~~~~ 146 (257)
T TIGR03611 79 IERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTR----RCFDVR--------IALLQHAGPEAYVHAQAL 146 (257)
T ss_pred CCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHH----HHHHHH--------HHHHhccCcchhhhhhhh
Confidence 45899999999999999999999999999999987543211100 000000 000000000000000000
Q ss_pred hccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHH
Q 012190 321 IENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAK 400 (468)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~ 400 (468)
. ..+. .........+.. ..............+......+... .....+..+++|+++++|++|.++|++ ..+
T Consensus 147 ~--~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~P~l~i~g~~D~~~~~~-~~~ 218 (257)
T TIGR03611 147 F--LYPA-DWISENAARLAA--DEAHALAHFPGKANVLRRINALEAF--DVSARLDRIQHPVLLIANRDDMLVPYT-QSL 218 (257)
T ss_pred h--hccc-cHhhccchhhhh--hhhhcccccCccHHHHHHHHHHHcC--CcHHHhcccCccEEEEecCcCcccCHH-HHH
Confidence 0 0000 000000000000 0000000000111111111111111 122456788999999999999999999 789
Q ss_pred HHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 401 RLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 401 ~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
.+.+.+++++++.++++||++++++|+++++.|.+
T Consensus 219 ~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~ 253 (257)
T TIGR03611 219 RLAAALPNAQLKLLPYGGHASNVTDPETFNRALLD 253 (257)
T ss_pred HHHHhcCCceEEEECCCCCCccccCHHHHHHHHHH
Confidence 99999999999999999999999999999999993
No 7
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.95 E-value=4.6e-26 Score=226.77 Aligned_cols=257 Identities=14% Similarity=0.154 Sum_probs=155.5
Q ss_pred eeecCCCCC--CCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC--------ChHHHHHHHHHHHHHHh
Q 012190 167 FCPVDCGRP--LKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREH 236 (468)
Q Consensus 167 ~~y~~~g~~--~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~~~~ 236 (468)
++|...|+. .+++|+|||+||++++...|.+++..|.++|+|+++|+||||.| +++++++++.++++++
T Consensus 74 i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l- 152 (360)
T PLN02679 74 INYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLAKNYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEV- 152 (360)
T ss_pred EEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHh-
Confidence 466666641 11358999999999999999999999988999999999999987 3578899999999874
Q ss_pred hcCCCCcEEEEEeChhHHHHHHHHHh-CCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchh--HHh------hHHHHhh
Q 012190 237 ASSPEKPIYLVGDSFGGCLALAVAAR-NPTIDLILILSNPATSFGRSQLQPLFPILKAMPDE--LHC------AVPYLLS 307 (468)
Q Consensus 237 ~~~~~~~i~LvGhS~GG~ia~~~a~~-~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~--~~~------~~~~~~~ 307 (468)
..++++|+||||||.+++.+|++ +|++|+++|+++++..................+.. ... ....++.
T Consensus 153 ---~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (360)
T PLN02679 153 ---VQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFN 229 (360)
T ss_pred ---cCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHH
Confidence 34599999999999999988874 79999999999986533211110000000000000 000 0000000
Q ss_pred hhcCCh-hhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCC-cchhHHHHHHHHH-HhHHHhhhcccCCceEEE
Q 012190 308 YVMGDP-IKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIP-KDTLLWKLKLLKS-ASAYANSRLHAVKAEVLV 384 (468)
Q Consensus 308 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~-~~~~~~~~l~~i~~PvLl 384 (468)
...... +.......... .....+.+.+.+. .... ............. ........+.++++|+|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLi 297 (360)
T PLN02679 230 RVKQRDNLKNILLSVYGN--KEAVDDELVEIIR----------GPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILV 297 (360)
T ss_pred HhcCHHHHHHHHHHhccC--cccCCHHHHHHHH----------hhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEE
Confidence 000000 00000000000 0000000000000 0000 0111111111110 001112456789999999
Q ss_pred EEeCCCCCCCcHH----HHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 385 LASGKDNMLPSED----EAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 385 I~G~~D~~v~~~~----~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
|+|++|.++|+.. ..+.+.+.++++++++++++||++++|+|+++++.|. .|+.+
T Consensus 298 i~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~--~FL~~ 356 (360)
T PLN02679 298 LWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLL--PWLAQ 356 (360)
T ss_pred EEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHH--HHHHh
Confidence 9999999998861 1245667789999999999999999999999999999 56654
No 8
>PLN02578 hydrolase
Probab=99.94 E-value=1.1e-25 Score=223.56 Aligned_cols=248 Identities=16% Similarity=0.171 Sum_probs=156.6
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC-------hHHHHHHHHHHHHHHhhcC
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP-------FEGLVKFVEETVRREHASS 239 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss-------~~~~~~dl~~~i~~~~~~~ 239 (468)
++|...|+ +|+|||+||++++...|..+++.|+++|+|+++|+||||.|+ .+++++++.++++.+.
T Consensus 78 i~Y~~~g~----g~~vvliHG~~~~~~~w~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~~--- 150 (354)
T PLN02578 78 IHYVVQGE----GLPIVLIHGFGASAFHWRYNIPELAKKYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEVV--- 150 (354)
T ss_pred EEEEEcCC----CCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHhc---
Confidence 46666664 678999999999999999999999889999999999999983 6778889999998853
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcch------HHHhh-CchhHHhhHHHHhh----h
Q 012190 240 PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLF------PILKA-MPDELHCAVPYLLS----Y 308 (468)
Q Consensus 240 ~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~------~~~~~-~~~~~~~~~~~~~~----~ 308 (468)
.++++++||||||.+++.+|.++|++++++|+++++..+......... ..... .............. .
T Consensus 151 -~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (354)
T PLN02578 151 -KEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFW 229 (354)
T ss_pred -cCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHHH
Confidence 458999999999999999999999999999999986543322110000 00000 00000000000000 0
Q ss_pred hcCChhhHHH--HhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHH-----hHHHhhhcccCCce
Q 012190 309 VMGDPIKMAM--VNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA-----SAYANSRLHAVKAE 381 (468)
Q Consensus 309 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~l~~i~~P 381 (468)
....+..... ...... .....+.+.+.+. ...............+... .....+.+.++++|
T Consensus 230 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 298 (354)
T PLN02578 230 QAKQPSRIESVLKSVYKD--KSNVDDYLVESIT---------EPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCP 298 (354)
T ss_pred HhcCHHHHHHHHHHhcCC--cccCCHHHHHHHH---------hcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCC
Confidence 0000000000 000000 0000000000000 0000111100001111110 11123456889999
Q ss_pred EEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 382 VLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 382 vLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
+++|+|++|.+++.+ ..+.+.+.+++++++++ ++||+++.|+|+++++.|.+
T Consensus 299 vLiI~G~~D~~v~~~-~~~~l~~~~p~a~l~~i-~~GH~~~~e~p~~~~~~I~~ 350 (354)
T PLN02578 299 LLLLWGDLDPWVGPA-KAEKIKAFYPDTTLVNL-QAGHCPHDEVPEQVNKALLE 350 (354)
T ss_pred EEEEEeCCCCCCCHH-HHHHHHHhCCCCEEEEe-CCCCCccccCHHHHHHHHHH
Confidence 999999999999999 79999999999999999 58999999999999999994
No 9
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.94 E-value=1.3e-25 Score=216.56 Aligned_cols=244 Identities=13% Similarity=0.155 Sum_probs=152.5
Q ss_pred CCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC--------hHHHHHHHH
Q 012190 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP--------FEGLVKFVE 229 (468)
Q Consensus 158 ~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss--------~~~~~~dl~ 229 (468)
..+|.. ++|...|+ +|+|||+||++.+...|..+++.|.++|+|+++|+||||.|+ ++++++++.
T Consensus 20 ~~~~~~---i~y~~~G~----~~~iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~ 92 (286)
T PRK03204 20 DSSRGR---IHYIDEGT----GPPILLCHGNPTWSFLYRDIIVALRDRFRCVAPDYLGFGLSERPSGFGYQIDEHARVIG 92 (286)
T ss_pred EcCCcE---EEEEECCC----CCEEEEECCCCccHHHHHHHHHHHhCCcEEEEECCCCCCCCCCCCccccCHHHHHHHHH
Confidence 334444 46777775 678999999999999999999999888999999999999873 577888888
Q ss_pred HHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhh-Cch-hHHh-hH--HH
Q 012190 230 ETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKA-MPD-ELHC-AV--PY 304 (468)
Q Consensus 230 ~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~-~~~-~~~~-~~--~~ 304 (468)
++++++ +.++++++||||||.+++.+|.++|++|+++|++++..... ... ....... ... .... .. ..
T Consensus 93 ~~~~~~----~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~ 165 (286)
T PRK03204 93 EFVDHL----GLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPA-DTL--AMKAFSRVMSSPPVQYAILRRNF 165 (286)
T ss_pred HHHHHh----CCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCC-Cch--hHHHHHHHhccccchhhhhhhhH
Confidence 888774 45689999999999999999999999999999988754211 000 0000000 000 0000 00 00
Q ss_pred HhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHH----HHH---hHHHhhhcc-
Q 012190 305 LLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLL----KSA---SAYANSRLH- 376 (468)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~~---~~~~~~~l~- 376 (468)
....+.... .....+... ...+.. .............+ ... .......+.
T Consensus 166 ~~~~~~~~~-------~~~~~~~~~-~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (286)
T PRK03204 166 FVERLIPAG-------TEHRPSSAV-MAHYRA--------------VQPNAAARRGVAEMPKQILAARPLLARLAREVPA 223 (286)
T ss_pred HHHHhcccc-------ccCCCCHHH-HHHhcC--------------CCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhh
Confidence 000000000 000111100 000000 00000000000000 000 000001111
Q ss_pred -cCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcc
Q 012190 377 -AVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKY 439 (468)
Q Consensus 377 -~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~ 439 (468)
.+++|+|+|+|++|.++++....+.+.+.+|++++++++++||++++|+|+++++.|. +|+
T Consensus 224 ~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~--~~~ 285 (286)
T PRK03204 224 TLGTKPTLLVWGMKDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDAPDRIAAAII--ERF 285 (286)
T ss_pred hcCCCCeEEEecCCCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccCHHHHHHHHH--Hhc
Confidence 2389999999999999876524688999999999999999999999999999999999 453
No 10
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.94 E-value=6.5e-26 Score=218.21 Aligned_cols=250 Identities=18% Similarity=0.150 Sum_probs=154.1
Q ss_pred cCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHH---hHhhh-cCCeEEEEecCCCCCCCChH--------HH
Q 012190 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLIL---HHKPL-GKAFEVRCLHIPVYDRTPFE--------GL 224 (468)
Q Consensus 157 ~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~---~~~~L-~~~~~V~~~D~~G~G~Ss~~--------~~ 224 (468)
++.+|....-++|...|+ +|+|||+||++++...|.. .+..+ ..+|+|+++|+||||.|+.. .+
T Consensus 12 ~~~~~~~~~~~~y~~~g~----~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 87 (282)
T TIGR03343 12 INEKGLSNFRIHYNEAGN----GEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVN 87 (282)
T ss_pred cccccccceeEEEEecCC----CCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchh
Confidence 344555444467777665 6789999999988877754 34455 56799999999999999521 34
Q ss_pred HHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCC--CcC--cchHHHhhCchhHHh
Q 012190 225 VKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRS--QLQ--PLFPILKAMPDELHC 300 (468)
Q Consensus 225 ~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~--~~~--~~~~~~~~~~~~~~~ 300 (468)
++++.++++. ...++++++||||||.+++.+|.++|++++++|++++....... ... ...............
T Consensus 88 ~~~l~~~l~~----l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (282)
T TIGR03343 88 ARAVKGLMDA----LDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYE 163 (282)
T ss_pred HHHHHHHHHH----cCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHH
Confidence 6788888887 44569999999999999999999999999999999975321100 000 000000000000000
Q ss_pred hHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHH---HHhHHHhhhccc
Q 012190 301 AVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLK---SASAYANSRLHA 377 (468)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~l~~ 377 (468)
.....+.....++ ...+.. ..+....... . . ............ .........+.+
T Consensus 164 ~~~~~~~~~~~~~---------~~~~~~-~~~~~~~~~~---~--------~-~~~~~~~~~~~~~~~~~~~~~~~~l~~ 221 (282)
T TIGR03343 164 TLKQMLNVFLFDQ---------SLITEE-LLQGRWENIQ---R--------Q-PEHLKNFLISSQKAPLSTWDVTARLGE 221 (282)
T ss_pred HHHHHHhhCccCc---------ccCcHH-HHHhHHHHhh---c--------C-HHHHHHHHHhccccccccchHHHHHhh
Confidence 0000000000000 000000 0000000000 0 0 000000000000 000111345688
Q ss_pred CCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcc
Q 012190 378 VKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKY 439 (468)
Q Consensus 378 i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~ 439 (468)
+++|+|+|+|++|.+++++ ..+.+.+.++++++++++++||++++|+|+.+++.|. .|+
T Consensus 222 i~~Pvlli~G~~D~~v~~~-~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i~--~fl 280 (282)
T TIGR03343 222 IKAKTLVTWGRDDRFVPLD-HGLKLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLVI--DFL 280 (282)
T ss_pred CCCCEEEEEccCCCcCCch-hHHHHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHHH--HHh
Confidence 9999999999999999998 7999999999999999999999999999999999999 554
No 11
>PLN02965 Probable pheophorbidase
Probab=99.94 E-value=6.5e-26 Score=215.20 Aligned_cols=229 Identities=13% Similarity=0.111 Sum_probs=147.4
Q ss_pred eEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC--------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeCh
Q 012190 181 TLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLVGDSF 251 (468)
Q Consensus 181 ~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~ 251 (468)
.|||+||++.+...|..+++.| ..+|+|+++|+||||.| +++++++|+.++++.+. ..++++|+||||
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~---~~~~~~lvGhSm 81 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLP---PDHKVILVGHSI 81 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcC---CCCCEEEEecCc
Confidence 5999999999999999999999 77899999999999987 36888999999999842 125899999999
Q ss_pred hHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChh-------hHHHHhhccC
Q 012190 252 GGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPI-------KMAMVNIENR 324 (468)
Q Consensus 252 GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 324 (468)
||.+++.+|.++|++|.++|++++......... .......... ....+...+......+. ..........
T Consensus 82 GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (255)
T PLN02965 82 GGGSVTEALCKFTDKISMAIYVAAAMVKPGSII--SPRLKNVMEG-TEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQ 158 (255)
T ss_pred chHHHHHHHHhCchheeEEEEEccccCCCCCCc--cHHHHhhhhc-cccceeeeeccCCCCCcchhhcCHHHHHHHHhcC
Confidence 999999999999999999999998532111100 0000000000 00000000000000000 0000000000
Q ss_pred CChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHH
Q 012190 325 LPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNN 404 (468)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~ 404 (468)
..... ..... .......... .... ......+..+++|+++|+|++|.++|+. ..+.+.+
T Consensus 159 ~~~~~-~~~~~--------------~~~~~~~~~~-~~~~----~~~~~~~~~i~vP~lvi~g~~D~~~~~~-~~~~~~~ 217 (255)
T PLN02965 159 SPLED-YTLSS--------------KLLRPAPVRA-FQDL----DKLPPNPEAEKVPRVYIKTAKDNLFDPV-RQDVMVE 217 (255)
T ss_pred CCHHH-HHHHH--------------HhcCCCCCcc-hhhh----hhccchhhcCCCCEEEEEcCCCCCCCHH-HHHHHHH
Confidence 00000 00000 0000000000 0000 0111244578999999999999999999 7999999
Q ss_pred hCCCcEEEEeCCCCccccccCcHHHHHHHHhc
Q 012190 405 SLQNCIVRNFKDNGHTLLLEEGISLLTIIKGT 436 (468)
Q Consensus 405 ~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~ 436 (468)
.++++++++++++||++++|+|+++++.|.++
T Consensus 218 ~~~~a~~~~i~~~GH~~~~e~p~~v~~~l~~~ 249 (255)
T PLN02965 218 NWPPAQTYVLEDSDHSAFFSVPTTLFQYLLQA 249 (255)
T ss_pred hCCcceEEEecCCCCchhhcCHHHHHHHHHHH
Confidence 99999999999999999999999999999954
No 12
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.94 E-value=1.6e-25 Score=214.51 Aligned_cols=248 Identities=18% Similarity=0.204 Sum_probs=156.2
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC--------ChHHHHHHHHHHHHHHhhc
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHAS 238 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~~~~~~ 238 (468)
++|.+.|. .++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++++.++++++
T Consensus 18 ~~~~~~g~--~~~~~vv~~hG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~--- 92 (278)
T TIGR03056 18 WHVQDMGP--TAGPLLLLLHGTGASTHSWRDLMPPLARSFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAE--- 92 (278)
T ss_pred EEEEecCC--CCCCeEEEEcCCCCCHHHHHHHHHHHhhCcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHc---
Confidence 34555554 2468999999999999999999999988999999999999987 4788899999999874
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcC--ChhhH
Q 012190 239 SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMG--DPIKM 316 (468)
Q Consensus 239 ~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 316 (468)
..++++|+||||||.+++.+|.++|++++++|++++.............+........ ............. +....
T Consensus 93 -~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 170 (278)
T TIGR03056 93 -GLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLAC-NPFTPPMMSRGAADQQRVER 170 (278)
T ss_pred -CCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhh-cccchHHHHhhcccCcchhH
Confidence 3458899999999999999999999999999999886532111100000000000000 0000000000000 00000
Q ss_pred HHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHh-HHHhhhcccCCceEEEEEeCCCCCCCc
Q 012190 317 AMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSAS-AYANSRLHAVKAEVLVLASGKDNMLPS 395 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~l~~i~~PvLlI~G~~D~~v~~ 395 (468)
............ ....... .. ............+.... ......+.++++|+++|+|++|..+|+
T Consensus 171 ~~~~~~~~~~~~--~~~~~~~----------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~ 236 (278)
T TIGR03056 171 LIRDTGSLLDKA--GMTYYGR----------LI--RSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPP 236 (278)
T ss_pred Hhhccccccccc--hhhHHHH----------hh--cCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCH
Confidence 000000000000 0000000 00 00000000000000000 011245678899999999999999999
Q ss_pred HHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhc
Q 012190 396 EDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGT 436 (468)
Q Consensus 396 ~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~ 436 (468)
+ ..+.+.+.+++++++.++++||++++|+|+++++.|.+|
T Consensus 237 ~-~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f 276 (278)
T TIGR03056 237 D-ESKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLILQA 276 (278)
T ss_pred H-HHHHHHHhccCCeEEEECCCCCcccccCHHHHHHHHHHH
Confidence 9 799999999999999999999999999999999999943
No 13
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.94 E-value=1.4e-25 Score=227.02 Aligned_cols=261 Identities=16% Similarity=0.178 Sum_probs=153.5
Q ss_pred eecCCCCCC-CCCCeEEEeCCCCCchhhHHH-hHhhhc----CCeEEEEecCCCCCCC--------ChHHHHHHHH-HHH
Q 012190 168 CPVDCGRPL-KGSPTLLFLPGIDGLGLGLIL-HHKPLG----KAFEVRCLHIPVYDRT--------PFEGLVKFVE-ETV 232 (468)
Q Consensus 168 ~y~~~g~~~-~~~p~lV~lHG~~~s~~~~~~-~~~~L~----~~~~V~~~D~~G~G~S--------s~~~~~~dl~-~~i 232 (468)
++...|.+. +.+|+|||+||++++...|.. +++.|. ++|+|+++|+||||.| +++++++++. .++
T Consensus 189 ~~~~~gp~~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~ll 268 (481)
T PLN03087 189 FVHVQQPKDNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERSVL 268 (481)
T ss_pred EEEEecCCCCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHHHH
Confidence 444444321 235799999999999999985 446654 6899999999999987 3677788874 677
Q ss_pred HHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhC-chh------HHhhHHHH
Q 012190 233 RREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAM-PDE------LHCAVPYL 305 (468)
Q Consensus 233 ~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~ 305 (468)
+. .+.++++++||||||.+++.+|.++|++|+++|+++|+.................. +.. .......+
T Consensus 269 ~~----lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 344 (481)
T PLN03087 269 ER----YKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWPPIAFGASVACW 344 (481)
T ss_pred HH----cCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccccCCccccchhHHHH
Confidence 76 44569999999999999999999999999999999985433221110000000000 000 00000000
Q ss_pred hhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchh--cchhh-hhhccCCcchhHHHHHHHH-H----HhHHHhhhccc
Q 012190 306 LSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPAL--LPRLS-VMSDIIPKDTLLWKLKLLK-S----ASAYANSRLHA 377 (468)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~l~~~~~~~~-~----~~~~~~~~l~~ 377 (468)
+... ...... ...... ...+.+...+... ..... .... .........+..+. . ....+...+.+
T Consensus 345 ~~~~-~~~~~~-----~~~~~~-~~~~~~~~l~~~~~~~~~l~~~~~~-~~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~ 416 (481)
T PLN03087 345 YEHI-SRTICL-----VICKNH-RLWEFLTRLLTRNRMRTFLIEGFFC-HTHNAAWHTLHNIICGSGSKLDGYLDHVRDQ 416 (481)
T ss_pred HHHH-Hhhhhc-----ccccch-HHHHHHHHHhhhhhhhHHHHHHHHh-ccchhhHHHHHHHHhchhhhhhhHHHHHHHh
Confidence 0000 000000 000000 0000000000000 00000 0000 00000000000000 0 01111223346
Q ss_pred CCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccc-cCcHHHHHHHHhcCcccccC
Q 012190 378 VKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLL-EEGISLLTIIKGTCKYRRSR 443 (468)
Q Consensus 378 i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~-e~p~~~~~~I~~~~F~~r~~ 443 (468)
+++|+|+|+|++|.++|++ ..+.+.+.+|++++++++++||++++ |+|+++++.|. +||+++.
T Consensus 417 I~vPtLII~Ge~D~ivP~~-~~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~--~F~~~~~ 480 (481)
T PLN03087 417 LKCDVAIFHGGDDELIPVE-CSYAVKAKVPRARVKVIDDKDHITIVVGRQKEFARELE--EIWRRSS 480 (481)
T ss_pred CCCCEEEEEECCCCCCCHH-HHHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHHHHHH--HHhhccC
Confidence 8999999999999999999 79999999999999999999999886 99999999999 7998863
No 14
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.94 E-value=1.9e-25 Score=211.61 Aligned_cols=234 Identities=13% Similarity=0.099 Sum_probs=152.9
Q ss_pred CCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeC
Q 012190 177 KGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT------PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS 250 (468)
.++|+|||+||++++...|..++..|.++|+|+++|+||||.| +++++++|+.++++.+ ..++++|+|||
T Consensus 14 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~l----~~~~~~lvGhS 89 (255)
T PRK10673 14 HNNSPIVLVHGLFGSLDNLGVLARDLVNDHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDAL----QIEKATFIGHS 89 (255)
T ss_pred CCCCCEEEECCCCCchhHHHHHHHHHhhCCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHc----CCCceEEEEEC
Confidence 4678999999999999999999999999999999999999988 5789999999999984 44589999999
Q ss_pred hhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHH
Q 012190 251 FGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIK 330 (468)
Q Consensus 251 ~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (468)
|||.+++.+|.++|++|+++|++++......... ....... +........... ................
T Consensus 90 ~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~--~~~~~~~--------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 158 (255)
T PRK10673 90 MGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRR--HDEIFAA--------INAVSEAGATTR-QQAAAIMRQHLNEEGV 158 (255)
T ss_pred HHHHHHHHHHHhCHhhcceEEEEecCCCCccchh--hHHHHHH--------HHHhhhcccccH-HHHHHHHHHhcCCHHH
Confidence 9999999999999999999999976432211100 0000000 000000000000 0000000000000000
Q ss_pred hhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcE
Q 012190 331 LEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCI 410 (468)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~ 410 (468)
.......+.. ....+.. ...+. ..... .....+..+++|+|+|+|++|..++++ ..+.+.+.+++++
T Consensus 159 ~~~~~~~~~~-------~~~~~~~-~~~~~--~~~~~--~~~~~~~~~~~P~l~i~G~~D~~~~~~-~~~~~~~~~~~~~ 225 (255)
T PRK10673 159 IQFLLKSFVD-------GEWRFNV-PVLWD--QYPHI--VGWEKIPAWPHPALFIRGGNSPYVTEA-YRDDLLAQFPQAR 225 (255)
T ss_pred HHHHHhcCCc-------ceeEeeH-HHHHH--hHHHH--hCCcccCCCCCCeEEEECCCCCCCCHH-HHHHHHHhCCCcE
Confidence 0000000000 0000000 00110 01000 012345778999999999999999998 7999999999999
Q ss_pred EEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 411 VRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 411 ~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
+++++++||++++|+|+++++.|. .|+.
T Consensus 226 ~~~~~~~gH~~~~~~p~~~~~~l~--~fl~ 253 (255)
T PRK10673 226 AHVIAGAGHWVHAEKPDAVLRAIR--RYLN 253 (255)
T ss_pred EEEeCCCCCeeeccCHHHHHHHHH--HHHh
Confidence 999999999999999999999999 4543
No 15
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.94 E-value=1.4e-25 Score=209.57 Aligned_cols=229 Identities=15% Similarity=0.211 Sum_probs=144.5
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC------hHHHHHHHHHHHHHHhhcCCCCcEEEEEeChh
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP------FEGLVKFVEETVRREHASSPEKPIYLVGDSFG 252 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss------~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~G 252 (468)
.|+|||+||++++...|..+++.|.++|+|+++|+||||.|+ ++++++++.+.+ .++++++|||||
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~--------~~~~~lvG~S~G 75 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEELSAHFTLHLVDLPGHGRSRGFGPLSLADAAEAIAAQA--------PDPAIWLGWSLG 75 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhhccCeEEEEecCCcCccCCCCCCcCHHHHHHHHHHhC--------CCCeEEEEEcHH
Confidence 478999999999999999999999888999999999999884 444444443321 258999999999
Q ss_pred HHHHHHHHHhCCCCceEEEEeCCCCCCCCCC-cC-cch-HHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhH
Q 012190 253 GCLALAVAARNPTIDLILILSNPATSFGRSQ-LQ-PLF-PILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRI 329 (468)
Q Consensus 253 G~ia~~~a~~~P~~v~~lVli~p~~~~~~~~-~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (468)
|.+++.+|.++|++++++|++++........ +. ... .....+...........+..+. .. ........ ..
T Consensus 76 g~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~-~~ 148 (245)
T TIGR01738 76 GLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFL----AL--QTLGTPTA-RQ 148 (245)
T ss_pred HHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHH----HH--HHhcCCcc-ch
Confidence 9999999999999999999998865432211 11 000 0000000000000000000000 00 00000000 00
Q ss_pred HhhhhhhhcchhcchhhhhhccCCc--chhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC
Q 012190 330 KLEQLSNNLPALLPRLSVMSDIIPK--DTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ 407 (468)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~ 407 (468)
....+...+. ..... ..+...+..+.. ......+.++++|+++++|++|.+++++ ..+.+.+.++
T Consensus 149 ~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~--~~~~~~l~~i~~Pvlii~g~~D~~~~~~-~~~~~~~~~~ 215 (245)
T TIGR01738 149 DARALKQTLL----------ARPTPNVQVLQAGLEILAT--VDLRQPLQNISVPFLRLYGYLDGLVPAK-VVPYLDKLAP 215 (245)
T ss_pred HHHHHHHHhh----------ccCCCCHHHHHHHHHHhhc--ccHHHHHhcCCCCEEEEeecCCcccCHH-HHHHHHHhCC
Confidence 0011111000 00000 111111111111 1123456789999999999999999999 6888999999
Q ss_pred CcEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 408 NCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 408 ~~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
++++++++++||++++|+|+++++.|.+
T Consensus 216 ~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 243 (245)
T TIGR01738 216 HSELYIFAKAAHAPFLSHAEAFCALLVA 243 (245)
T ss_pred CCeEEEeCCCCCCccccCHHHHHHHHHh
Confidence 9999999999999999999999999994
No 16
>PHA02857 monoglyceride lipase; Provisional
Probab=99.94 E-value=4.3e-25 Score=212.02 Aligned_cols=250 Identities=14% Similarity=0.138 Sum_probs=153.5
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCC--------hHHHHH
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP--------FEGLVK 226 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss--------~~~~~~ 226 (468)
+...||..+....+.+... ..+.|+++||++++...|..+++.| ..+|+|+++|+||||.|+ +.++++
T Consensus 5 ~~~~~g~~l~~~~~~~~~~---~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~ 81 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPITY---PKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVR 81 (276)
T ss_pred eecCCCCEEEEEeccCCCC---CCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHH
Confidence 4455666533322333222 3567777799999999999999999 558999999999999873 456667
Q ss_pred HHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHh
Q 012190 227 FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLL 306 (468)
Q Consensus 227 dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (468)
|+.+.++.+....+..+++|+||||||.+|+.+|.++|+.++++|+++|...... . .....+. .......
T Consensus 82 d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~--~-~~~~~~~-------~~~~~~~ 151 (276)
T PHA02857 82 DVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEA--V-PRLNLLA-------AKLMGIF 151 (276)
T ss_pred HHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEecccccccc--c-cHHHHHH-------HHHHHHh
Confidence 7777776655445567899999999999999999999999999999998653211 0 0000000 0000000
Q ss_pred -hhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEE
Q 012190 307 -SYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVL 385 (468)
Q Consensus 307 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI 385 (468)
.......+.. ....... .+....... + ... .......+..... .........+.++++|+|+|
T Consensus 152 ~~~~~~~~~~~------~~~~~~~-~~~~~~~~~------~-~~~-~~~~~~~~~~~~~-~~~~~~~~~l~~i~~Pvliv 215 (276)
T PHA02857 152 YPNKIVGKLCP------ESVSRDM-DEVYKYQYD------P-LVN-HEKIKAGFASQVL-KATNKVRKIIPKIKTPILIL 215 (276)
T ss_pred CCCCccCCCCH------hhccCCH-HHHHHHhcC------C-Ccc-CCCccHHHHHHHH-HHHHHHHHhcccCCCCEEEE
Confidence 0000000000 0000000 000000000 0 000 0001111111111 11222346778999999999
Q ss_pred EeCCCCCCCcHHHHHHHHHhC-CCcEEEEeCCCCccccccCcH---HHHHHHHh
Q 012190 386 ASGKDNMLPSEDEAKRLNNSL-QNCIVRNFKDNGHTLLLEEGI---SLLTIIKG 435 (468)
Q Consensus 386 ~G~~D~~v~~~~~~~~l~~~l-~~~~~~~i~~aGH~~~~e~p~---~~~~~I~~ 435 (468)
+|++|.++|++ ..+.+.+.+ +++++++++++||.++.|.++ ++.+.+.+
T Consensus 216 ~G~~D~i~~~~-~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~ 268 (276)
T PHA02857 216 QGTNNEISDVS-GAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIET 268 (276)
T ss_pred ecCCCCcCChH-HHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHH
Confidence 99999999999 799998877 478999999999999999874 45555553
No 17
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.94 E-value=2.9e-25 Score=220.42 Aligned_cols=256 Identities=18% Similarity=0.185 Sum_probs=156.6
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchh-hHHHhHhhhc-CCeEEEEecCCCCCCC--------ChHHHH
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGL-GLILHHKPLG-KAFEVRCLHIPVYDRT--------PFEGLV 225 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~-~~~~~~~~L~-~~~~V~~~D~~G~G~S--------s~~~~~ 225 (468)
+.+.+|....+....+.+. +.+++|||+||++++.. .|..+++.|. .+|+|+++|+||||.| ++++++
T Consensus 66 ~~~~~g~~l~~~~~~p~~~--~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~ 143 (349)
T PLN02385 66 EVNSRGVEIFSKSWLPENS--RPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLV 143 (349)
T ss_pred EEcCCCCEEEEEEEecCCC--CCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHH
Confidence 4455666532222222211 24678999999998866 4678888995 5899999999999987 467889
Q ss_pred HHHHHHHHHHhhc--CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHH
Q 012190 226 KFVEETVRREHAS--SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVP 303 (468)
Q Consensus 226 ~dl~~~i~~~~~~--~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (468)
+|+.++++.+... ....+++|+||||||.+++.+|.++|+.++++|+++|............ .............+
T Consensus 144 ~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~--~~~~~~~~~~~~~p 221 (349)
T PLN02385 144 DDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPP--LVLQILILLANLLP 221 (349)
T ss_pred HHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCch--HHHHHHHHHHHHCC
Confidence 9999998876542 2345899999999999999999999999999999998764322111100 00000000000000
Q ss_pred HHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEE
Q 012190 304 YLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVL 383 (468)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvL 383 (468)
.. ......... .............. +. . ........+......+... ......+.++++|+|
T Consensus 222 ~~-~~~~~~~~~-------~~~~~~~~~~~~~~-~~-------~-~~~~~~~~~~~~~~~l~~~-~~~~~~l~~i~~P~L 283 (349)
T PLN02385 222 KA-KLVPQKDLA-------ELAFRDLKKRKMAE-YN-------V-IAYKDKPRLRTAVELLRTT-QEIEMQLEEVSLPLL 283 (349)
T ss_pred Cc-eecCCCccc-------cccccCHHHHHHhh-cC-------c-ceeCCCcchHHHHHHHHHH-HHHHHhcccCCCCEE
Confidence 00 000000000 00000000000000 00 0 0000011122222222221 223456788999999
Q ss_pred EEEeCCCCCCCcHHHHHHHHHhC--CCcEEEEeCCCCccccccCcHH----HHHHHH
Q 012190 384 VLASGKDNMLPSEDEAKRLNNSL--QNCIVRNFKDNGHTLLLEEGIS----LLTIIK 434 (468)
Q Consensus 384 lI~G~~D~~v~~~~~~~~l~~~l--~~~~~~~i~~aGH~~~~e~p~~----~~~~I~ 434 (468)
+|+|++|.++++. ..+.+.+.+ +++++++++++||.+++|+|++ +.+.|.
T Consensus 284 ii~G~~D~vv~~~-~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~ 339 (349)
T PLN02385 284 ILHGEADKVTDPS-VSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDII 339 (349)
T ss_pred EEEeCCCCccChH-HHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHH
Confidence 9999999999999 689998887 4689999999999999999987 566666
No 18
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.94 E-value=1.6e-25 Score=209.81 Aligned_cols=238 Identities=20% Similarity=0.203 Sum_probs=155.3
Q ss_pred eecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-------ChHHHHHHHHHHHHHHhhcCC
Q 012190 168 CPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASSP 240 (468)
Q Consensus 168 ~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-------s~~~~~~dl~~~i~~~~~~~~ 240 (468)
+|...|.+ +++|+|||+||++++...|..+++.|.++|+|+++|+||||.| +++++++++.++++.+ .
T Consensus 3 ~~~~~g~~-~~~~~li~~hg~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~----~ 77 (251)
T TIGR02427 3 HYRLDGAA-DGAPVLVFINSLGTDLRMWDPVLPALTPDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHL----G 77 (251)
T ss_pred eEEeecCC-CCCCeEEEEcCcccchhhHHHHHHHhhcccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----C
Confidence 34444542 2578999999999999999999999988999999999999987 4788899999999874 3
Q ss_pred CCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhC-chhHHhhHHHHhhhhcCChhhHHHH
Q 012190 241 EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAM-PDELHCAVPYLLSYVMGDPIKMAMV 319 (468)
Q Consensus 241 ~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (468)
.++++++||||||.+++.+|.++|+.++++|++++........ ........+ ....................
T Consensus 78 ~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 150 (251)
T TIGR02427 78 IERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPE--SWNARIAAVRAEGLAALADAVLERWFTPGF----- 150 (251)
T ss_pred CCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchh--hHHHHHhhhhhccHHHHHHHHHHHHccccc-----
Confidence 4589999999999999999999999999999998754322110 000000000 00000000000000000000
Q ss_pred hhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHH
Q 012190 320 NIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEA 399 (468)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~ 399 (468)
...... ..+.+...+. .............+. .......+.++++|+++++|++|.++|.+ ..
T Consensus 151 ---~~~~~~-~~~~~~~~~~-----------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~Pvlii~g~~D~~~~~~-~~ 212 (251)
T TIGR02427 151 ---REAHPA-RLDLYRNMLV-----------RQPPDGYAGCCAAIR--DADFRDRLGAIAVPTLCIAGDQDGSTPPE-LV 212 (251)
T ss_pred ---ccCChH-HHHHHHHHHH-----------hcCHHHHHHHHHHHh--cccHHHHhhhcCCCeEEEEeccCCcCChH-HH
Confidence 000000 0000000000 000011111111111 11123456788999999999999999999 68
Q ss_pred HHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 400 KRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 400 ~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
+.+.+.+++.++++++++||++++++|+++.+.|.+
T Consensus 213 ~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~ 248 (251)
T TIGR02427 213 REIADLVPGARFAEIRGAGHIPCVEQPEAFNAALRD 248 (251)
T ss_pred HHHHHhCCCceEEEECCCCCcccccChHHHHHHHHH
Confidence 899999999999999999999999999999999983
No 19
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.94 E-value=3e-25 Score=204.43 Aligned_cols=216 Identities=23% Similarity=0.258 Sum_probs=145.9
Q ss_pred EEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC---------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChh
Q 012190 182 LLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT---------PFEGLVKFVEETVRREHASSPEKPIYLVGDSFG 252 (468)
Q Consensus 182 lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S---------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~G 252 (468)
|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++++.++++++. .++++++|||+|
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~----~~~~~lvG~S~G 76 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALG----IKKVILVGHSMG 76 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHHTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTT----TSSEEEEEETHH
T ss_pred eEEECCCCCCHHHHHHHHHHHhCCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccc----cccccccccccc
Confidence 79999999999999999999988999999999999988 36788999999999854 469999999999
Q ss_pred HHHHHHHHHhCCCCceEEEEeCCCCCCCCCCc-CcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHh
Q 012190 253 GCLALAVAARNPTIDLILILSNPATSFGRSQL-QPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKL 331 (468)
Q Consensus 253 G~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (468)
|.+++.++.++|++|+++|+++|......... .........+........ ..+....+. ....... .
T Consensus 77 g~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-------~~~~~~~-~ 144 (228)
T PF12697_consen 77 GMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSL----RRLASRFFY-------RWFDGDE-P 144 (228)
T ss_dssp HHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHH----HHHHHHHHH-------HHHTHHH-H
T ss_pred cccccccccccccccccceeecccccccccccccccchhhhhhhhcccccc----ccccccccc-------ccccccc-c
Confidence 99999999999999999999998663211100 000000000000000000 000000000 0000000 0
Q ss_pred hhhhhhcchhcchhhhhhccCCcchhHHHHHHHHH--HhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCc
Q 012190 332 EQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKS--ASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNC 409 (468)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~ 409 (468)
....+ .........+.. ........+..+++|+++++|++|.+++.+ ..+.+.+.++++
T Consensus 145 ~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~-~~~~~~~~~~~~ 205 (228)
T PF12697_consen 145 EDLIR------------------SSRRALAEYLRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPE-SAEELADKLPNA 205 (228)
T ss_dssp HHHHH------------------HHHHHHHHHHHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHH-HHHHHHHHSTTE
T ss_pred ccccc------------------ccccccccccccccccccccccccccCCCeEEeecCCCCCCCHH-HHHHHHHHCCCC
Confidence 00000 000111111111 222334566888999999999999999988 799999999999
Q ss_pred EEEEeCCCCccccccCcHHHHHH
Q 012190 410 IVRNFKDNGHTLLLEEGISLLTI 432 (468)
Q Consensus 410 ~~~~i~~aGH~~~~e~p~~~~~~ 432 (468)
++++++++||++++|+|++++++
T Consensus 206 ~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 206 ELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp EEEEETTSSSTHHHHSHHHHHHH
T ss_pred EEEEECCCCCccHHHCHHHHhcC
Confidence 99999999999999999999874
No 20
>PRK10749 lysophospholipase L2; Provisional
Probab=99.94 E-value=8.7e-25 Score=215.22 Aligned_cols=264 Identities=14% Similarity=0.122 Sum_probs=158.8
Q ss_pred cCccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC-------------
Q 012190 154 KEIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT------------- 219 (468)
Q Consensus 154 ~~~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S------------- 219 (468)
..++..+|.. ++|...+.+ .++++||++||++++...|..++..| ..+|+|+++|+||||.|
T Consensus 33 ~~~~~~~g~~---l~~~~~~~~-~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~ 108 (330)
T PRK10749 33 AEFTGVDDIP---IRFVRFRAP-HHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVE 108 (330)
T ss_pred eEEEcCCCCE---EEEEEccCC-CCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccc
Confidence 3445667765 345444321 24678999999999998999998877 77899999999999987
Q ss_pred ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHH
Q 012190 220 PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELH 299 (468)
Q Consensus 220 s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~ 299 (468)
+++++++|+..+++++....+..+++++||||||.+++.+|.++|+.++++|+++|........ ... ....+.....
T Consensus 109 ~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~-~~~--~~~~~~~~~~ 185 (330)
T PRK10749 109 RFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPL-PSW--MARRILNWAE 185 (330)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCC-CcH--HHHHHHHHHH
Confidence 3678899999999886544456799999999999999999999999999999999876432211 111 0000000000
Q ss_pred hhHHHHhhh--hcCChhhHHHHhhccCCC-hhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcc
Q 012190 300 CAVPYLLSY--VMGDPIKMAMVNIENRLP-PRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLH 376 (468)
Q Consensus 300 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 376 (468)
. .+..... .....+... .......+ ..+......+.+.. .+.. ........+....+.. ...+...+.
T Consensus 186 ~-~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~ 256 (330)
T PRK10749 186 G-HPRIRDGYAIGTGRWRPL-PFAINVLTHSRERYRRNLRFYAD----DPEL--RVGGPTYHWVRESILA-GEQVLAGAG 256 (330)
T ss_pred H-hcCCCCcCCCCCCCCCCC-CcCCCCCCCCHHHHHHHHHHHHh----CCCc--ccCCCcHHHHHHHHHH-HHHHHhhcc
Confidence 0 0000000 000000000 00000000 00000111111100 0000 0001112222222211 112335668
Q ss_pred cCCceEEEEEeCCCCCCCcHHHHHHHHHhC-------CCcEEEEeCCCCccccccCc---HHHHHHHH
Q 012190 377 AVKAEVLVLASGKDNMLPSEDEAKRLNNSL-------QNCIVRNFKDNGHTLLLEEG---ISLLTIIK 434 (468)
Q Consensus 377 ~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l-------~~~~~~~i~~aGH~~~~e~p---~~~~~~I~ 434 (468)
++++|+|+|+|++|++++++ ..+.+.+.+ +++++++++|+||.++.|.+ +.+.+.|.
T Consensus 257 ~i~~P~Lii~G~~D~vv~~~-~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~ 323 (330)
T PRK10749 257 DITTPLLLLQAEEERVVDNR-MHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIV 323 (330)
T ss_pred CCCCCEEEEEeCCCeeeCHH-HHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHH
Confidence 89999999999999999999 688888765 35689999999999999987 34445555
No 21
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.93 E-value=2.6e-25 Score=207.65 Aligned_cols=258 Identities=15% Similarity=0.085 Sum_probs=165.4
Q ss_pred eeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhc-CCeEEEEecCCCCCCC---------ChHHHHHHHHHHHHH
Q 012190 165 RWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRT---------PFEGLVKFVEETVRR 234 (468)
Q Consensus 165 ~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~-~~~~V~~~D~~G~G~S---------s~~~~~~dl~~~i~~ 234 (468)
.++++.+.|. .++|.++++||++.++..|+.++..|+ .+|+|+++|+||+|.| ++..++.|+..++++
T Consensus 32 I~~h~~e~g~--~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~ 109 (322)
T KOG4178|consen 32 IRLHYVEGGP--GDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDH 109 (322)
T ss_pred EEEEEEeecC--CCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHH
Confidence 4567777775 479999999999999999999999994 4599999999999999 478899999999999
Q ss_pred HhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhH-----------Hhh--
Q 012190 235 EHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDEL-----------HCA-- 301 (468)
Q Consensus 235 ~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~-----------~~~-- 301 (468)
+. .++++++||+|||.+|+.+|..+|++|+++|+++.....+... ..........+.. ...
T Consensus 110 Lg----~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~--~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s 183 (322)
T KOG4178|consen 110 LG----LKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLK--PLDSSKAIFGKSYYICLFQEPGKPETELS 183 (322)
T ss_pred hc----cceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccc--hhhhhccccCccceeEeccccCcchhhhc
Confidence 54 6699999999999999999999999999999998876521111 0000000000000 000
Q ss_pred ---HHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHH---Hhhhc
Q 012190 302 ---VPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAY---ANSRL 375 (468)
Q Consensus 302 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~l 375 (468)
...+...+........ ......+.. .+.+. ....+......+..+.+...+...+..... ....+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~w~-----t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~ 254 (322)
T KOG4178|consen 184 KDDTEMLVKTFRTRKTPGP--LIVPKQPNE--NPLWL-----TEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWAL 254 (322)
T ss_pred cchhHHhHHhhhccccCCc--cccCCCCCC--ccchh-----hHHHHHHHHhccccccccccchhhHHHhhCchhccccc
Confidence 0000000100000000 000000000 00000 001111111112222222222222222222 24567
Q ss_pred ccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCc-EEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 376 HAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNC-IVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 376 ~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~-~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
.++++|+++|+|+.|.+.+.....+.+.+..++. +.++++++||+++.|+|+++++.|. .|+..
T Consensus 255 ~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~--~f~~~ 319 (322)
T KOG4178|consen 255 AKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAIL--GFINS 319 (322)
T ss_pred cccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHH--HHHHh
Confidence 8999999999999999998875567777777866 7888999999999999999999999 56543
No 22
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.93 E-value=1.1e-24 Score=203.82 Aligned_cols=255 Identities=19% Similarity=0.146 Sum_probs=153.6
Q ss_pred CCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC-----------hHHHHHHHH
Q 012190 161 GGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP-----------FEGLVKFVE 229 (468)
Q Consensus 161 g~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss-----------~~~~~~dl~ 229 (468)
++.-.|..-....+ .+++++||+||+|++...|....+.|++.++|+++|+||+|+|+ .+.+++.++
T Consensus 74 ~~~~iw~~~~~~~~--~~~~plVliHGyGAg~g~f~~Nf~~La~~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE 151 (365)
T KOG4409|consen 74 NGIEIWTITVSNES--ANKTPLVLIHGYGAGLGLFFRNFDDLAKIRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIE 151 (365)
T ss_pred CCceeEEEeecccc--cCCCcEEEEeccchhHHHHHHhhhhhhhcCceEEecccCCCCCCCCCCCCCcccchHHHHHHHH
Confidence 33445554444433 46789999999999999999999999999999999999999994 456777777
Q ss_pred HHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCc-----CcchHHHhhCchhHHhhHHH
Q 012190 230 ETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQL-----QPLFPILKAMPDELHCAVPY 304 (468)
Q Consensus 230 ~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 304 (468)
++... .+..+.+|+|||+||.+|..||.+||++|+.|||++|+.-..+... .........+........|.
T Consensus 152 ~WR~~----~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl 227 (365)
T KOG4409|consen 152 QWRKK----MGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPL 227 (365)
T ss_pred HHHHH----cCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHH
Confidence 77776 4455999999999999999999999999999999999764432210 11101111111110000011
Q ss_pred HhhhhcC-------ChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHH----hHHHhh
Q 012190 305 LLSYVMG-------DPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA----SAYANS 373 (468)
Q Consensus 305 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~ 373 (468)
.+-..++ ..+.............+++..++..... ..+..--..++.+... ...+.+
T Consensus 228 ~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n------------~~~psgE~~fk~l~~~~g~Ar~Pm~~ 295 (365)
T KOG4409|consen 228 ALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCN------------AQNPSGETAFKNLFEPGGWARRPMIQ 295 (365)
T ss_pred HHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhc------------CCCCcHHHHHHHHHhccchhhhhHHH
Confidence 0000000 0000001000000001111000000000 0001111111122111 111234
Q ss_pred hcccCC--ceEEEEEeCCCCCCCcHHHHHHHHHh--CCCcEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 374 RLHAVK--AEVLVLASGKDNMLPSEDEAKRLNNS--LQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 374 ~l~~i~--~PvLlI~G~~D~~v~~~~~~~~l~~~--l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
++..++ ||+++|+|++|.+.... ..++.+. ...++.+++|++||.+++|+|+.|++.+.+
T Consensus 296 r~~~l~~~~pv~fiyG~~dWmD~~~--g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~ 359 (365)
T KOG4409|consen 296 RLRELKKDVPVTFIYGDRDWMDKNA--GLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLE 359 (365)
T ss_pred HHHhhccCCCEEEEecCcccccchh--HHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHH
Confidence 445555 99999999999887665 4555553 336899999999999999999999999984
No 23
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.93 E-value=1.3e-24 Score=215.93 Aligned_cols=244 Identities=15% Similarity=0.117 Sum_probs=153.7
Q ss_pred eecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-----------ChHHHHHHHHHHHHHHh
Q 012190 168 CPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----------PFEGLVKFVEETVRREH 236 (468)
Q Consensus 168 ~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-----------s~~~~~~dl~~~i~~~~ 236 (468)
+|.+.|. .++|+|||+||++++...|..+++.|+++|+|+++|+||||.| +++++++++.++++++.
T Consensus 118 ~y~~~G~--~~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~ 195 (383)
T PLN03084 118 FCVESGS--NNNPPVLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELK 195 (383)
T ss_pred EEEecCC--CCCCeEEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhC
Confidence 4666664 2468999999999999999999999988999999999999976 36788999999999854
Q ss_pred hcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhH
Q 012190 237 ASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKM 316 (468)
Q Consensus 237 ~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
.++++|+|||+||.+++.+|.++|++|+++|+++|+.......... .+..+... ....++. ..+...
T Consensus 196 ----~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~---~l~~~~~~---l~~~~~~---~~~~~~ 262 (383)
T PLN03084 196 ----SDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPS---TLSEFSNF---LLGEIFS---QDPLRA 262 (383)
T ss_pred ----CCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchH---HHHHHHHH---Hhhhhhh---cchHHH
Confidence 4589999999999999999999999999999999865321111110 00000000 0000000 000000
Q ss_pred HHHhhc----cCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHH----hHHHhhh--cccCCceEEEEE
Q 012190 317 AMVNIE----NRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA----SAYANSR--LHAVKAEVLVLA 386 (468)
Q Consensus 317 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~--l~~i~~PvLlI~ 386 (468)
...... ..... +....+...+.... .....+......+... ....... ...+++|+|+|+
T Consensus 263 ~~~~~~~~~~~~~~~-e~~~~~~~~~~~~~---------~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~ 332 (383)
T PLN03084 263 SDKALTSCGPYAMKE-DDAMVYRRPYLTSG---------SSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCW 332 (383)
T ss_pred HhhhhcccCccCCCH-HHHHHHhccccCCc---------chHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEe
Confidence 000000 00000 00001111000000 0000000001111100 0001111 146799999999
Q ss_pred eCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 387 SGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 387 G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
|++|.+++.+ ..+.+.+. .++++++++++||++++|+|+++++.|. .|++
T Consensus 333 G~~D~~v~~~-~~~~~a~~-~~a~l~vIp~aGH~~~~E~Pe~v~~~I~--~Fl~ 382 (383)
T PLN03084 333 GLRDRWLNYD-GVEDFCKS-SQHKLIELPMAGHHVQEDCGEELGGIIS--GILS 382 (383)
T ss_pred eCCCCCcCHH-HHHHHHHh-cCCeEEEECCCCCCcchhCHHHHHHHHH--HHhh
Confidence 9999999998 68888876 4889999999999999999999999999 5554
No 24
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.93 E-value=1e-25 Score=218.97 Aligned_cols=253 Identities=23% Similarity=0.258 Sum_probs=152.5
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcCC--eEEEEecCCCCCCC---------ChHHHHHHHHHHHHHHhhcCCCCcEEE
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGKA--FEVRCLHIPVYDRT---------PFEGLVKFVEETVRREHASSPEKPIYL 246 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~~--~~V~~~D~~G~G~S---------s~~~~~~dl~~~i~~~~~~~~~~~i~L 246 (468)
++|+||++|||+++...|..++..|.+. +.|+++|++|+|.+ +..++++.+..+..+ ...+++++
T Consensus 57 ~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~----~~~~~~~l 132 (326)
T KOG1454|consen 57 DKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKE----VFVEPVSL 132 (326)
T ss_pred CCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHh----hcCcceEE
Confidence 5789999999999999999999999766 99999999999944 256677777777666 55668999
Q ss_pred EEeChhHHHHHHHHHhCCCCceEEE---EeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcC-ChhhHHHHhhc
Q 012190 247 VGDSFGGCLALAVAARNPTIDLILI---LSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMG-DPIKMAMVNIE 322 (468)
Q Consensus 247 vGhS~GG~ia~~~a~~~P~~v~~lV---li~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 322 (468)
+|||+||.+|+.+|+.+|+.|+++| ++++...........................+........ -...+......
T Consensus 133 vghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 212 (326)
T KOG1454|consen 133 VGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKV 212 (326)
T ss_pred EEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhcceee
Confidence 9999999999999999999999999 5555443222221111111111111110000000000000 00000000000
Q ss_pred cCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCC-ceEEEEEeCCCCCCCcHHHHHH
Q 012190 323 NRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVK-AEVLVLASGKDNMLPSEDEAKR 401 (468)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~-~PvLlI~G~~D~~v~~~~~~~~ 401 (468)
.........+.....+.... ......+............+......+.++. ||+|+++|++|+++|.+ .+..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~-~~~~ 285 (326)
T KOG1454|consen 213 VYTDPSRLLEKLLHLLSRPV------KEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLE-LAEE 285 (326)
T ss_pred eccccccchhhhhhheeccc------ccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHH-HHHH
Confidence 00000000001000000000 0000000000000000000112223446666 99999999999999999 7999
Q ss_pred HHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccccC
Q 012190 402 LNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSR 443 (468)
Q Consensus 402 l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~~ 443 (468)
+.+.+|++++++++++||.+++|.|++++..|. .|+++..
T Consensus 286 ~~~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~--~Fi~~~~ 325 (326)
T KOG1454|consen 286 LKKKLPNAELVEIPGAGHLPHLERPEEVAALLR--SFIARLR 325 (326)
T ss_pred HHhhCCCceEEEeCCCCcccccCCHHHHHHHHH--HHHHHhc
Confidence 999999999999999999999999999999999 7887754
No 25
>PRK06489 hypothetical protein; Provisional
Probab=99.93 E-value=1.9e-24 Score=215.36 Aligned_cols=257 Identities=13% Similarity=0.097 Sum_probs=148.4
Q ss_pred eeecCCCCCC-----CCCCeEEEeCCCCCchhhHH--HhHhhh--------cCCeEEEEecCCCCCCCC-----------
Q 012190 167 FCPVDCGRPL-----KGSPTLLFLPGIDGLGLGLI--LHHKPL--------GKAFEVRCLHIPVYDRTP----------- 220 (468)
Q Consensus 167 ~~y~~~g~~~-----~~~p~lV~lHG~~~s~~~~~--~~~~~L--------~~~~~V~~~D~~G~G~Ss----------- 220 (468)
++|...|++. +.+|+|||+||++++...|. .+.+.| .++|+|+++|+||||.|+
T Consensus 52 i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~ 131 (360)
T PRK06489 52 LHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFP 131 (360)
T ss_pred EEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCC
Confidence 5666667521 01689999999999988775 444333 678999999999999883
Q ss_pred ---hHHHHHHHHHHH-HHHhhcCCCCcEE-EEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCC-CcCcch---HHH
Q 012190 221 ---FEGLVKFVEETV-RREHASSPEKPIY-LVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRS-QLQPLF---PIL 291 (468)
Q Consensus 221 ---~~~~~~dl~~~i-~~~~~~~~~~~i~-LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~-~~~~~~---~~~ 291 (468)
++++++++.+++ ++ .+.++++ |+||||||.+|+.+|.++|++|+++|++++....... .+.... ...
T Consensus 132 ~~~~~~~a~~~~~~l~~~----lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~~~ 207 (360)
T PRK06489 132 RYDYDDMVEAQYRLVTEG----LGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRMLIESI 207 (360)
T ss_pred cccHHHHHHHHHHHHHHh----cCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHHHHHH
Confidence 356666666644 44 3344664 8999999999999999999999999999875321110 000000 000
Q ss_pred hhCchhH-------HhhHHHHhhh--hcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHH
Q 012190 292 KAMPDEL-------HCAVPYLLSY--VMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLK 362 (468)
Q Consensus 292 ~~~~~~~-------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 362 (468)
....... .......... ........... ....... ......+... ..... .....+.....
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~------~~~~~-~~~~~~~~~~~ 277 (360)
T PRK06489 208 RNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQ--AQAPTRA-AADKLVDERL------AAPVT-ADANDFLYQWD 277 (360)
T ss_pred HhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHH--HhcCChH-HHHHHHHHHH------Hhhhh-cCHHHHHHHHH
Confidence 0000000 0000000000 00000000000 0000000 0001111000 00000 01111111111
Q ss_pred HHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHH--HHHHHhCCCcEEEEeCCC----CccccccCcHHHHHHHHhc
Q 012190 363 LLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEA--KRLNNSLQNCIVRNFKDN----GHTLLLEEGISLLTIIKGT 436 (468)
Q Consensus 363 ~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~--~~l~~~l~~~~~~~i~~a----GH~~~~e~p~~~~~~I~~~ 436 (468)
... .......+.++++|+|+|+|++|.++|++ .. +.+.+.+|++++++++++ ||.++ |+|+++++.|.
T Consensus 278 ~~~--~~d~~~~L~~I~~PvLvI~G~~D~~~p~~-~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~-- 351 (360)
T PRK06489 278 SSR--DYNPSPDLEKIKAPVLAINSADDERNPPE-TGVMEAALKRVKHGRLVLIPASPETRGHGTT-GSAKFWKAYLA-- 351 (360)
T ss_pred Hhh--ccChHHHHHhCCCCEEEEecCCCcccChh-hHHHHHHHHhCcCCeEEEECCCCCCCCcccc-cCHHHHHHHHH--
Confidence 111 11124567899999999999999999988 45 789999999999999996 99997 89999999999
Q ss_pred CcccccC
Q 012190 437 CKYRRSR 443 (468)
Q Consensus 437 ~F~~r~~ 443 (468)
.|+....
T Consensus 352 ~FL~~~~ 358 (360)
T PRK06489 352 EFLAQVP 358 (360)
T ss_pred HHHHhcc
Confidence 6776543
No 26
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.93 E-value=6.8e-25 Score=206.22 Aligned_cols=224 Identities=17% Similarity=0.181 Sum_probs=139.6
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChh
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT------PFEGLVKFVEETVRREHASSPEKPIYLVGDSFG 252 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~G 252 (468)
+|+|||+||++++...|..+++.|. +|+|+++|+||||.| +++++++++.+++++ .+.++++++|||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~----~~~~~~~lvG~S~G 76 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEALP-DYPRLYIDLPGHGGSAAISVDGFADVSRLLSQTLQS----YNILPYWLVGYSLG 76 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHcC-CCCEEEecCCCCCCCCCccccCHHHHHHHHHHHHHH----cCCCCeEEEEECHH
Confidence 6789999999999999999999995 799999999999988 588999999999998 34569999999999
Q ss_pred HHHHHHHHHhCCCC-ceEEEEeCCCCCCCCCCcCcchHHHhhCch-hHHh-----hHHHHhhhhcCChhhHHHHhhccCC
Q 012190 253 GCLALAVAARNPTI-DLILILSNPATSFGRSQLQPLFPILKAMPD-ELHC-----AVPYLLSYVMGDPIKMAMVNIENRL 325 (468)
Q Consensus 253 G~ia~~~a~~~P~~-v~~lVli~p~~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (468)
|.+|+.+|.++|+. +++++++++......... ........ .+.. .....+......+ .....
T Consensus 77 g~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ 145 (242)
T PRK11126 77 GRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEE----RQARWQNDRQWAQRFRQEPLEQVLADWYQQP-------VFASL 145 (242)
T ss_pred HHHHHHHHHhCCcccccEEEEeCCCCCCCCHHH----HHHHHhhhHHHHHHhccCcHHHHHHHHHhcc-------hhhcc
Confidence 99999999999765 999999887543221100 00000000 0000 0000000000000 00001
Q ss_pred ChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHH-HHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHH
Q 012190 326 PPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLK-SASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNN 404 (468)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~ 404 (468)
.... ...+..... . .............. .........+.++++|+++|+|++|..+. .+.+
T Consensus 146 ~~~~-~~~~~~~~~----------~-~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~------~~~~ 207 (242)
T PRK11126 146 NAEQ-RQQLVAKRS----------N-NNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ------ALAQ 207 (242)
T ss_pred CccH-HHHHHHhcc----------c-CCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH------HHHH
Confidence 0000 000000000 0 00000000000000 00112235678899999999999998542 2223
Q ss_pred hCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcc
Q 012190 405 SLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKY 439 (468)
Q Consensus 405 ~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~ 439 (468)
. .++++++++++||++++|+|+++++.|. .|+
T Consensus 208 ~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~--~fl 239 (242)
T PRK11126 208 Q-LALPLHVIPNAGHNAHRENPAAFAASLA--QIL 239 (242)
T ss_pred H-hcCeEEEeCCCCCchhhhChHHHHHHHH--HHH
Confidence 2 3789999999999999999999999999 454
No 27
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.93 E-value=3.9e-24 Score=210.87 Aligned_cols=254 Identities=16% Similarity=0.139 Sum_probs=153.1
Q ss_pred CccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchh-hHHHhHhhh-cCCeEEEEecCCCCCCCC--------hHHH
Q 012190 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGL-GLILHHKPL-GKAFEVRCLHIPVYDRTP--------FEGL 224 (468)
Q Consensus 155 ~~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~-~~~~~~~~L-~~~~~V~~~D~~G~G~Ss--------~~~~ 224 (468)
.+...||.......+.+.+. .+.+++|||+||++.+.. .|..+...| ..+|+|+++|+||||.|+ ++++
T Consensus 36 ~~~~~dg~~l~~~~~~~~~~-~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~ 114 (330)
T PLN02298 36 FFTSPRGLSLFTRSWLPSSS-SPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLV 114 (330)
T ss_pred eEEcCCCCEEEEEEEecCCC-CCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHHHH
Confidence 45566777643333322221 123678999999986643 566677778 468999999999999883 6778
Q ss_pred HHHHHHHHHHHhhc--CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhH
Q 012190 225 VKFVEETVRREHAS--SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAV 302 (468)
Q Consensus 225 ~~dl~~~i~~~~~~--~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (468)
++|+.++++.+... ....+++|+||||||.+++.++.++|++++++|+++|............ .... .... .
T Consensus 115 ~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~~-~~~~----~ 188 (330)
T PLN02298 115 VEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPW-PIPQ-ILTF----V 188 (330)
T ss_pred HHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCch-HHHH-HHHH----H
Confidence 99999999987653 2345899999999999999999999999999999998654322111000 0000 0000 0
Q ss_pred HHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCC-cchhHHHHHHHHHHhHHHhhhcccCCce
Q 012190 303 PYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIP-KDTLLWKLKLLKSASAYANSRLHAVKAE 381 (468)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~l~~i~~P 381 (468)
..+.......+... ......... ....+... . + ..+. .....+....+ .........+.++++|
T Consensus 189 ~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~~-~------~---~~~~~~~~~~~~~~~~-~~~~~~~~~l~~i~~P 253 (330)
T PLN02298 189 ARFLPTLAIVPTAD---LLEKSVKVP-AKKIIAKR-N------P---MRYNGKPRLGTVVELL-RVTDYLGKKLKDVSIP 253 (330)
T ss_pred HHHCCCCccccCCC---cccccccCH-HHHHHHHh-C------c---cccCCCccHHHHHHHH-HHHHHHHHhhhhcCCC
Confidence 00000000000000 000000000 00000000 0 0 0000 01111111111 1222234567889999
Q ss_pred EEEEEeCCCCCCCcHHHHHHHHHhCC--CcEEEEeCCCCccccccCcHHHHH
Q 012190 382 VLVLASGKDNMLPSEDEAKRLNNSLQ--NCIVRNFKDNGHTLLLEEGISLLT 431 (468)
Q Consensus 382 vLlI~G~~D~~v~~~~~~~~l~~~l~--~~~~~~i~~aGH~~~~e~p~~~~~ 431 (468)
+|+|+|++|.++|++ ..+.+++.++ ++++++++++||.+++++|+...+
T Consensus 254 vLii~G~~D~ivp~~-~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~ 304 (330)
T PLN02298 254 FIVLHGSADVVTDPD-VSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIE 304 (330)
T ss_pred EEEEecCCCCCCCHH-HHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHH
Confidence 999999999999999 7899888774 789999999999999999875443
No 28
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.93 E-value=1e-25 Score=202.92 Aligned_cols=270 Identities=16% Similarity=0.208 Sum_probs=177.1
Q ss_pred cchHHHHHHhccCccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcC--CeEEEEecCCCCCCC-
Q 012190 143 TDSVKDYLDAAKEIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGK--AFEVRCLHIPVYDRT- 219 (468)
Q Consensus 143 ~~~~~~y~~~~~~~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~--~~~V~~~D~~G~G~S- 219 (468)
...|++||++.+.+..+++.. .+..|... .+.+.+|.++++||+|.++..|..++++|.. ..+|+++|+||||+|
T Consensus 40 ~~pWs~yFdekedv~i~~~~~-t~n~Y~t~-~~~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk 117 (343)
T KOG2564|consen 40 PVPWSDYFDEKEDVSIDGSDL-TFNVYLTL-PSATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETK 117 (343)
T ss_pred CCchHHhhccccccccCCCcc-eEEEEEec-CCCCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccc
Confidence 455899999988876555442 34444433 2245699999999999999999999999933 478888999999998
Q ss_pred -------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHh--CCCCceEEEEeCCCCCCCCCCcCcchHH
Q 012190 220 -------PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPATSFGRSQLQPLFPI 290 (468)
Q Consensus 220 -------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~--~P~~v~~lVli~p~~~~~~~~~~~~~~~ 290 (468)
+.+.+++|+-.+++.+..+.+ .+|+||||||||+||...|.. -|. +.|+++++-.-+.....+..+..+
T Consensus 118 ~~~e~dlS~eT~~KD~~~~i~~~fge~~-~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVVEgtAmeAL~~m~~f 195 (343)
T KOG2564|consen 118 VENEDDLSLETMSKDFGAVIKELFGELP-PQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVVEGTAMEALNSMQHF 195 (343)
T ss_pred cCChhhcCHHHHHHHHHHHHHHHhccCC-CceEEEeccccchhhhhhhhhhhchh-hhceEEEEEechHHHHHHHHHHHH
Confidence 578899999999998875433 379999999999999888765 455 889999987665544444444555
Q ss_pred HhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCc-chhHHHHHHHHHHhH
Q 012190 291 LKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPK-DTLLWKLKLLKSASA 369 (468)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~ 369 (468)
+...|..+...-...-... ... ...+.. +..-.++........ ..+.|+.++....+.
T Consensus 196 L~~rP~~F~Si~~Ai~W~v-~sg------~~Rn~~--------------SArVsmP~~~~~~~eGh~yvwrtdL~kte~Y 254 (343)
T KOG2564|consen 196 LRNRPKSFKSIEDAIEWHV-RSG------QLRNRD--------------SARVSMPSQLKQCEEGHCYVWRTDLEKTEQY 254 (343)
T ss_pred HhcCCccccchhhHHHHHh-ccc------cccccc--------------cceEecchheeeccCCCcEEEEeeccccchh
Confidence 5555554332211110000 000 000000 000011111111111 123333222222111
Q ss_pred H------HhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccccC
Q 012190 370 Y------ANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSR 443 (468)
Q Consensus 370 ~------~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~~ 443 (468)
| +...+-...+|.++|.++.|++...- .+-++..+.++.+++.+||+.+.+.|.+++..+. .||.|++
T Consensus 255 W~gWF~gLS~~Fl~~p~~klLilAg~d~LDkdL----tiGQMQGk~Q~~vL~~~GH~v~ED~P~kva~~~~--~f~~Rn~ 328 (343)
T KOG2564|consen 255 WKGWFKGLSDKFLGLPVPKLLILAGVDRLDKDL----TIGQMQGKFQLQVLPLCGHFVHEDSPHKVAECLC--VFWIRNR 328 (343)
T ss_pred HHHHHhhhhhHhhCCCccceeEEecccccCcce----eeeeeccceeeeeecccCceeccCCcchHHHHHH--HHHhhhc
Confidence 1 23455677899999999999875332 3344445779999999999999999999999999 8999987
No 29
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.92 E-value=1.2e-23 Score=196.65 Aligned_cols=234 Identities=22% Similarity=0.288 Sum_probs=143.6
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC---------hHHHHHH-HHHHHHHHhhcCCCCcEEEEE
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP---------FEGLVKF-VEETVRREHASSPEKPIYLVG 248 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss---------~~~~~~d-l~~~i~~~~~~~~~~~i~LvG 248 (468)
+|+|||+||++++...|.++++.|+++|+|+++|+||||.|+ +++.+++ +..+++. .+.++++++|
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~G 76 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLGPHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQ----LGIEPFFLVG 76 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhcccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHH----cCCCeEEEEE
Confidence 368999999999999999999999989999999999999883 4555555 4444444 4566899999
Q ss_pred eChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHh--hCchhHH-hhHHHHhhhhcCChhhHHHHhhccCC
Q 012190 249 DSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILK--AMPDELH-CAVPYLLSYVMGDPIKMAMVNIENRL 325 (468)
Q Consensus 249 hS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (468)
|||||.+++.+|.++|+.+.+++++++............ .... .....+. .............+. .......
T Consensus 77 ~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 151 (251)
T TIGR03695 77 YSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAA-RRQNDEQLAQRFEQEGLEAFLDDWYQQPL----FASQKNL 151 (251)
T ss_pred eccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhh-hhhcchhhhhHHHhcCccHHHHHHhcCce----eeecccC
Confidence 999999999999999999999999988654322110000 0000 0000000 000000000000000 0000001
Q ss_pred ChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHH-HHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHH
Q 012190 326 PPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLK-SASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNN 404 (468)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~ 404 (468)
+... .+.+..... . .....+...+.... .........+..+++|+++|+|++|..++ . ..+.+.+
T Consensus 152 ~~~~-~~~~~~~~~----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~-~~~~~~~ 217 (251)
T TIGR03695 152 PPEQ-RQALRAKRL----------A-NNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-Q-IAKEMQK 217 (251)
T ss_pred ChHH-hHHHHHhcc----------c-ccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-H-HHHHHHh
Confidence 1100 111111000 0 00111111111110 01111224467899999999999998774 4 4777888
Q ss_pred hCCCcEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 405 SLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 405 ~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
..+++++++++++||++++|+|+++++.|.+
T Consensus 218 ~~~~~~~~~~~~~gH~~~~e~~~~~~~~i~~ 248 (251)
T TIGR03695 218 LLPNLTLVIIANAGHNIHLENPEAFAKILLA 248 (251)
T ss_pred cCCCCcEEEEcCCCCCcCccChHHHHHHHHH
Confidence 8899999999999999999999999999984
No 30
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.91 E-value=2e-23 Score=207.36 Aligned_cols=252 Identities=17% Similarity=0.182 Sum_probs=153.5
Q ss_pred eeecCCCCCC-CCCCeEEEeCCCCCchh-----------hHHHhH---hhh-cCCeEEEEecCCC--CCCC---------
Q 012190 167 FCPVDCGRPL-KGSPTLLFLPGIDGLGL-----------GLILHH---KPL-GKAFEVRCLHIPV--YDRT--------- 219 (468)
Q Consensus 167 ~~y~~~g~~~-~~~p~lV~lHG~~~s~~-----------~~~~~~---~~L-~~~~~V~~~D~~G--~G~S--------- 219 (468)
++|...|.+. .++|+|||+||++++.. .|..++ ..| .++|+|+++|+|| ||.|
T Consensus 18 ~~y~~~g~~~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~ 97 (351)
T TIGR01392 18 VAYETYGTLNAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGG 97 (351)
T ss_pred EEEEeccccCCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCC
Confidence 5777777531 24679999999999773 377775 244 7889999999999 5544
Q ss_pred ----------ChHHHHHHHHHHHHHHhhcCCCCc-EEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcch
Q 012190 220 ----------PFEGLVKFVEETVRREHASSPEKP-IYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLF 288 (468)
Q Consensus 220 ----------s~~~~~~dl~~~i~~~~~~~~~~~-i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~ 288 (468)
+++++++++.++++++ +.++ ++|+||||||.+++.+|.++|++++++|++++.......... ..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~-~~ 172 (351)
T TIGR01392 98 RPYGSDFPLITIRDDVKAQKLLLDHL----GIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIA-FN 172 (351)
T ss_pred CcCCCCCCCCcHHHHHHHHHHHHHHc----CCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHH-HH
Confidence 2578899999999884 3446 999999999999999999999999999999986543211100 00
Q ss_pred HHH-hhC---ch-------------hHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcch-----------
Q 012190 289 PIL-KAM---PD-------------ELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPA----------- 340 (468)
Q Consensus 289 ~~~-~~~---~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 340 (468)
... ..+ .. .... ....+... .....+.....+......
T Consensus 173 ~~~~~~~~~~~~~~~g~~~~~~~p~~~~~-~~~~~~~~-------------~~~~~~~~~~~f~~~~~~~~~~~~~~~~~ 238 (351)
T TIGR01392 173 EVQRQAILADPNWNDGDYYEDGQPDRGLA-LARMLAHL-------------TYRSEESMAERFGRAPQSGESPASGFDTR 238 (351)
T ss_pred HHHHHHHHhCCCCCCCCCCCCCChhhHHH-HHHHHHHH-------------hcCCHHHHHHHhCcCcccccccccccCcc
Confidence 000 000 00 0000 00000000 000000000000000000
Q ss_pred -----hcc-hhhhhhccCCcchhHHHHHHHHHHh-----HHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCc
Q 012190 341 -----LLP-RLSVMSDIIPKDTLLWKLKLLKSAS-----AYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNC 409 (468)
Q Consensus 341 -----~~~-~~~~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~ 409 (468)
... ....................+...+ ....+.+.++++|+|+|+|++|.++|+. ..+.+.+.++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~-~~~~~a~~i~~~ 317 (351)
T TIGR01392 239 FQVESYLRYQGDKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPA-ESRELAKALPAA 317 (351)
T ss_pred chHHHHHHHHHHHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHH-HHHHHHHHHhhc
Confidence 000 0000001111111111112222211 1124677899999999999999999999 799999999988
Q ss_pred EEE-----EeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 410 IVR-----NFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 410 ~~~-----~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
+++ +++++||++++|+|+++++.|. +|++
T Consensus 318 ~~~v~~~~i~~~~GH~~~le~p~~~~~~l~--~FL~ 351 (351)
T TIGR01392 318 GLRVTYVEIESPYGHDAFLVETDQVEELIR--GFLR 351 (351)
T ss_pred CCceEEEEeCCCCCcchhhcCHHHHHHHHH--HHhC
Confidence 765 5678999999999999999999 5653
No 31
>PRK07581 hypothetical protein; Validated
Probab=99.91 E-value=1.6e-23 Score=207.21 Aligned_cols=258 Identities=12% Similarity=0.017 Sum_probs=149.1
Q ss_pred eeecCCCCCC-CCCCeEEEeCCCCCchhhHHHhH---hhh-cCCeEEEEecCCCCCCCChH----------H-----HHH
Q 012190 167 FCPVDCGRPL-KGSPTLLFLPGIDGLGLGLILHH---KPL-GKAFEVRCLHIPVYDRTPFE----------G-----LVK 226 (468)
Q Consensus 167 ~~y~~~g~~~-~~~p~lV~lHG~~~s~~~~~~~~---~~L-~~~~~V~~~D~~G~G~Ss~~----------~-----~~~ 226 (468)
++|...|.+. .+.|+||++||++++...|..++ +.| .++|+|+++|+||||.|+.. + +++
T Consensus 28 l~y~~~G~~~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~ 107 (339)
T PRK07581 28 LAYKTYGTLNAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYD 107 (339)
T ss_pred EEEEecCccCCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHH
Confidence 5677777532 23567888888887766665543 467 46899999999999998521 1 466
Q ss_pred HHHH----HHHHHhhcCCCCc-EEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHH---hhCchh-
Q 012190 227 FVEE----TVRREHASSPEKP-IYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPIL---KAMPDE- 297 (468)
Q Consensus 227 dl~~----~i~~~~~~~~~~~-i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~---~~~~~~- 297 (468)
++.. ++++ ++.++ ++||||||||.+|+.+|.++|++|+++|++++................ ..-+.+
T Consensus 108 ~~~~~~~~l~~~----lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 183 (339)
T PRK07581 108 NVRAQHRLLTEK----FGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADPAFN 183 (339)
T ss_pred HHHHHHHHHHHH----hCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCCCCC
Confidence 6665 4444 44557 579999999999999999999999999999875532110000000000 000000
Q ss_pred --HH-----hhHHHHhhhhcCChhhHHHHhh--ccCCC---hhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHH
Q 012190 298 --LH-----CAVPYLLSYVMGDPIKMAMVNI--ENRLP---PRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLK 365 (468)
Q Consensus 298 --~~-----~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 365 (468)
.. ..................+... ..... .+........ ..............+..+.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~~~ 253 (339)
T PRK07581 184 GGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWE----------GNFLPRDPNNLLAMLWTWQ 253 (339)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHH----------HhhcccCcccHHHHHHHhh
Confidence 00 0000000000000000000000 00000 0000000000 0000011122222111111
Q ss_pred HH--------hHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCC-CCccccccCcHHHHHHHHhc
Q 012190 366 SA--------SAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKD-NGHTLLLEEGISLLTIIKGT 436 (468)
Q Consensus 366 ~~--------~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~-aGH~~~~e~p~~~~~~I~~~ 436 (468)
.. .......+.++++|+|+|+|++|..+|++ ..+.+.+.+++++++++++ +||+.++|+|++++..|.
T Consensus 254 ~~~~~~~~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~-~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~~~~~~~-- 330 (339)
T PRK07581 254 RGDISRNPAYGGDLAAALGSITAKTFVMPISTDLYFPPE-DCEAEAALIPNAELRPIESIWGHLAGFGQNPADIAFID-- 330 (339)
T ss_pred hcccccCcccCCCHHHHHhcCCCCEEEEEeCCCCCCCHH-HHHHHHHhCCCCeEEEeCCCCCccccccCcHHHHHHHH--
Confidence 10 01234567889999999999999999999 7899999999999999998 999999999999999999
Q ss_pred Ccccc
Q 012190 437 CKYRR 441 (468)
Q Consensus 437 ~F~~r 441 (468)
+|+++
T Consensus 331 ~~~~~ 335 (339)
T PRK07581 331 AALKE 335 (339)
T ss_pred HHHHH
Confidence 56543
No 32
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.91 E-value=5.7e-24 Score=210.65 Aligned_cols=255 Identities=15% Similarity=0.143 Sum_probs=148.3
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchh------------hHHHhHh---hh-cCCeEEEEecCCCCCCC-----ChHHHH
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGL------------GLILHHK---PL-GKAFEVRCLHIPVYDRT-----PFEGLV 225 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~------------~~~~~~~---~L-~~~~~V~~~D~~G~G~S-----s~~~~~ 225 (468)
++|...|. +++++||+||+.++.. .|.+++. .| +++|+|+++|+||||.| ++++++
T Consensus 48 l~y~~~G~---~~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~~~~~~~~a 124 (343)
T PRK08775 48 LRYELIGP---AGAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLDVPIDTADQA 124 (343)
T ss_pred EEEEEecc---CCCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCCCCCCHHHHH
Confidence 56776774 2334666666655554 6888886 57 57899999999999977 478899
Q ss_pred HHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhh---Cchh---HH
Q 012190 226 KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKA---MPDE---LH 299 (468)
Q Consensus 226 ~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~---~~~~---~~ 299 (468)
+++.+++++++.. +.++|+||||||++|+.+|.++|++|.++|++++........ ......... .... ..
T Consensus 125 ~dl~~ll~~l~l~---~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 200 (343)
T PRK08775 125 DAIALLLDALGIA---RLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYA-AAWRALQRRAVALGQLQCAEK 200 (343)
T ss_pred HHHHHHHHHcCCC---cceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHH-HHHHHHHHHHHHcCCCCCCch
Confidence 9999999985321 235799999999999999999999999999999864321100 000000000 0000 00
Q ss_pred h--hHHHHhhh-hcCChhhHHHHhhccCCC---h--hHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHH
Q 012190 300 C--AVPYLLSY-VMGDPIKMAMVNIENRLP---P--RIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYA 371 (468)
Q Consensus 300 ~--~~~~~~~~-~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 371 (468)
. ........ ....+..+ ......... . ......+.... ............... ...... ..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~~~---~~~~~~-~~ 269 (343)
T PRK08775 201 HGLALARQLAMLSYRTPEEF-EERFDAPPEVINGRVRVAAEDYLDAA------GAQYVARTPVNAYLR---LSESID-LH 269 (343)
T ss_pred hHHHHHHHHHHHHcCCHHHH-HHHhCCCccccCCCccchHHHHHHHH------HHHHHHhcChhHHHH---HHHHHh-hc
Confidence 0 00000000 00000000 000000000 0 00000000000 000000001111111 010000 00
Q ss_pred hhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhC-CCcEEEEeCC-CCccccccCcHHHHHHHHhcCccccc
Q 012190 372 NSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSL-QNCIVRNFKD-NGHTLLLEEGISLLTIIKGTCKYRRS 442 (468)
Q Consensus 372 ~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l-~~~~~~~i~~-aGH~~~~e~p~~~~~~I~~~~F~~r~ 442 (468)
...+.++++|+|+|+|++|.++|++ ..+.+.+.+ ++++++++++ +||++++|+|++|++.|. .|+.+.
T Consensus 270 ~~~l~~I~~PtLvi~G~~D~~~p~~-~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~--~FL~~~ 339 (343)
T PRK08775 270 RVDPEAIRVPTVVVAVEGDRLVPLA-DLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILT--TALRST 339 (343)
T ss_pred CCChhcCCCCeEEEEeCCCEeeCHH-HHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHH--HHHHhc
Confidence 1246789999999999999999988 688888887 6999999985 999999999999999999 677653
No 33
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.91 E-value=7e-23 Score=196.31 Aligned_cols=240 Identities=20% Similarity=0.213 Sum_probs=139.2
Q ss_pred CCeEEEeCCCCCchh-hHHHhHhhhcC-CeEEEEecCCCCCCCC----------hHHHHHHHHHHHHHHhhcCCCCcEEE
Q 012190 179 SPTLLFLPGIDGLGL-GLILHHKPLGK-AFEVRCLHIPVYDRTP----------FEGLVKFVEETVRREHASSPEKPIYL 246 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~-~~~~~~~~L~~-~~~V~~~D~~G~G~Ss----------~~~~~~dl~~~i~~~~~~~~~~~i~L 246 (468)
+++|||+||++++.. .|..+...+.+ +|+|+++|+||||.|+ ++++++++.++++++ ..+++++
T Consensus 25 ~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l 100 (288)
T TIGR01250 25 KIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKL----GLDKFYL 100 (288)
T ss_pred CCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHc----CCCcEEE
Confidence 678999999866655 44555556654 7999999999999873 567888888888874 4457999
Q ss_pred EEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhh-hcCChh-hHHHHhhc--
Q 012190 247 VGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSY-VMGDPI-KMAMVNIE-- 322 (468)
Q Consensus 247 vGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~-- 322 (468)
+||||||.+++.+|.++|++++++|++++........ .........++......+...... ...++. ........
T Consensus 101 iG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (288)
T TIGR01250 101 LGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYV-KELNRLRKELPPEVRAAIKRCEASGDYDNPEYQEAVEVFYHH 179 (288)
T ss_pred EEeehHHHHHHHHHHhCccccceeeEecccccchHHH-HHHHHHHhhcChhHHHHHHHHHhccCcchHHHHHHHHHHHHH
Confidence 9999999999999999999999999998754221100 000000111111000000000000 000000 00000000
Q ss_pred ----cCCChhHHhhhhhhhcchhcchhhhhhccC-CcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHH
Q 012190 323 ----NRLPPRIKLEQLSNNLPALLPRLSVMSDII-PKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSED 397 (468)
Q Consensus 323 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~ 397 (468)
....+.. ...+..... ......+ ....+.. ...+ ........+.++++|+++++|++|.+ ++.
T Consensus 180 ~~~~~~~~~~~-~~~~~~~~~------~~~~~~~~~~~~~~~-~~~~--~~~~~~~~l~~i~~P~lii~G~~D~~-~~~- 247 (288)
T TIGR01250 180 LLCRTRKWPEA-LKHLKSGMN------TNVYNIMQGPNEFTI-TGNL--KDWDITDKLSEIKVPTLLTVGEFDTM-TPE- 247 (288)
T ss_pred hhcccccchHH-HHHHhhccC------HHHHhcccCCccccc-cccc--cccCHHHHhhccCCCEEEEecCCCcc-CHH-
Confidence 0000000 000000000 0000000 0000000 0000 00112345678999999999999985 556
Q ss_pred HHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 398 EAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 398 ~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
..+.+.+.++++++++++++||++++|+|+++++.|.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~ 285 (288)
T TIGR01250 248 AAREMQELIAGSRLVVFPDGSHMTMIEDPEVYFKLLSD 285 (288)
T ss_pred HHHHHHHhccCCeEEEeCCCCCCcccCCHHHHHHHHHH
Confidence 68889999999999999999999999999999999983
No 34
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.91 E-value=3.9e-23 Score=207.04 Aligned_cols=263 Identities=14% Similarity=0.141 Sum_probs=157.3
Q ss_pred eeecCCCCCC-CCCCeEEEeCCCCCchhh-------------HHHhHh---hh-cCCeEEEEecCCCC-CCC--------
Q 012190 167 FCPVDCGRPL-KGSPTLLFLPGIDGLGLG-------------LILHHK---PL-GKAFEVRCLHIPVY-DRT-------- 219 (468)
Q Consensus 167 ~~y~~~g~~~-~~~p~lV~lHG~~~s~~~-------------~~~~~~---~L-~~~~~V~~~D~~G~-G~S-------- 219 (468)
++|...|.+. .++|+|||+||++++... |..++. .| .++|+|+++|+||+ |.|
T Consensus 35 ~~y~~~G~~~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~ 114 (379)
T PRK00175 35 LAYETYGTLNADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINP 114 (379)
T ss_pred EEEEeccccCCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCC
Confidence 5677777542 236899999999999984 666652 44 78999999999983 322
Q ss_pred -------------ChHHHHHHHHHHHHHHhhcCCCCc-EEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCc-
Q 012190 220 -------------PFEGLVKFVEETVRREHASSPEKP-IYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQL- 284 (468)
Q Consensus 220 -------------s~~~~~~dl~~~i~~~~~~~~~~~-i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~- 284 (468)
+++++++++.+++++++ .++ ++++||||||.+++.+|.++|++|+++|++++.........
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~----~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~ 190 (379)
T PRK00175 115 DTGKPYGSDFPVITIRDWVRAQARLLDALG----ITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNIA 190 (379)
T ss_pred CCCCcccCCCCcCCHHHHHHHHHHHHHHhC----CCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHHH
Confidence 37799999999999854 346 58999999999999999999999999999998653321100
Q ss_pred -Cc-chHHHhhCchh-------------HHhhHHHHhhh-hcCChhhHHHHhhccCCCh---------hHHhhhhhhhcc
Q 012190 285 -QP-LFPILKAMPDE-------------LHCAVPYLLSY-VMGDPIKMAMVNIENRLPP---------RIKLEQLSNNLP 339 (468)
Q Consensus 285 -~~-~~~~~~~~~~~-------------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~ 339 (468)
.. ........+.+ .......+... ......... ..+...... ....+.+....
T Consensus 191 ~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~-~~f~~~~~~~~~~~~~~~~~~~~~~l~~~- 268 (379)
T PRK00175 191 FNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELD-EKFGRELQSGELPFGFDVEFQVESYLRYQ- 268 (379)
T ss_pred HHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHH-hhcCccccccccccCCCccchHHHHHHHH-
Confidence 00 00000000000 00000000000 000000000 000000000 00000000000
Q ss_pred hhcchhhhhhccCCcchhHHHHHHHHHHh------HHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCc----
Q 012190 340 ALLPRLSVMSDIIPKDTLLWKLKLLKSAS------AYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNC---- 409 (468)
Q Consensus 340 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~------~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~---- 409 (468)
..........+........+...+ ......+.+|++|+|+|+|++|.++|++ ..+.+.+.++++
T Consensus 269 -----~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~-~~~~la~~i~~a~~~~ 342 (379)
T PRK00175 269 -----GDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPA-RSREIVDALLAAGADV 342 (379)
T ss_pred -----HHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHH-HHHHHHHHHHhcCCCe
Confidence 000011112222222222222211 1134677899999999999999999999 799999999877
Q ss_pred EEEEeC-CCCccccccCcHHHHHHHHhcCcccccC
Q 012190 410 IVRNFK-DNGHTLLLEEGISLLTIIKGTCKYRRSR 443 (468)
Q Consensus 410 ~~~~i~-~aGH~~~~e~p~~~~~~I~~~~F~~r~~ 443 (468)
++++++ ++||++++|+|+++++.|. .|+++..
T Consensus 343 ~l~~i~~~~GH~~~le~p~~~~~~L~--~FL~~~~ 375 (379)
T PRK00175 343 SYAEIDSPYGHDAFLLDDPRYGRLVR--AFLERAA 375 (379)
T ss_pred EEEEeCCCCCchhHhcCHHHHHHHHH--HHHHhhh
Confidence 777775 8999999999999999999 7887644
No 35
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.91 E-value=1.9e-22 Score=201.56 Aligned_cols=237 Identities=19% Similarity=0.226 Sum_probs=151.6
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCC--------hHHHHHHHHHHHHHHhhcCCCCcEEEEE
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP--------FEGLVKFVEETVRREHASSPEKPIYLVG 248 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss--------~~~~~~dl~~~i~~~~~~~~~~~i~LvG 248 (468)
..++|||+||++++...|..++..| .++|+|+++|+||||.|+ ++++++|+.++++.+....+..+++++|
T Consensus 135 ~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvG 214 (395)
T PLN02652 135 MRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFG 214 (395)
T ss_pred CceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 3678999999999998999999999 578999999999999873 5678899999999988766667899999
Q ss_pred eChhHHHHHHHHHhCCC---CceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCC
Q 012190 249 DSFGGCLALAVAARNPT---IDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRL 325 (468)
Q Consensus 249 hS~GG~ia~~~a~~~P~---~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (468)
|||||.+++.++. +|+ +++++|+.+|........ +.............+.+. ....... ......
T Consensus 215 hSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~-----~~~~~~~~l~~~~~p~~~-~~~~~~~-----~~~~s~ 282 (395)
T PLN02652 215 HSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAH-----PIVGAVAPIFSLVAPRFQ-FKGANKR-----GIPVSR 282 (395)
T ss_pred ECHHHHHHHHHHh-ccCcccccceEEEECcccccccch-----HHHHHHHHHHHHhCCCCc-ccCcccc-----cCCcCC
Confidence 9999999997664 564 899999999875332110 111000000000000000 0000000 000000
Q ss_pred ChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHh
Q 012190 326 PPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNS 405 (468)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~ 405 (468)
++......+.+.+. . .......+....+. ........+.++++|+|+++|++|.++|++ .++.+++.
T Consensus 283 ~~~~~~~~~~dp~~---------~--~g~i~~~~~~~~~~-~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~-~a~~l~~~ 349 (395)
T PLN02652 283 DPAALLAKYSDPLV---------Y--TGPIRVRTGHEILR-ISSYLTRNFKSVTVPFMVLHGTADRVTDPL-ASQDLYNE 349 (395)
T ss_pred CHHHHHHHhcCCCc---------c--cCCchHHHHHHHHH-HHHHHHhhcccCCCCEEEEEeCCCCCCCHH-HHHHHHHh
Confidence 00000000000000 0 00001111111111 112234667889999999999999999999 68988887
Q ss_pred CC--CcEEEEeCCCCcccccc-CcHHHHHHHHhcCcccc
Q 012190 406 LQ--NCIVRNFKDNGHTLLLE-EGISLLTIIKGTCKYRR 441 (468)
Q Consensus 406 l~--~~~~~~i~~aGH~~~~e-~p~~~~~~I~~~~F~~r 441 (468)
++ +++++++++++|.+++| +++++.+.|. +|+++
T Consensus 350 ~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~--~FL~~ 386 (395)
T PLN02652 350 AASRHKDIKLYDGFLHDLLFEPEREEVGRDII--DWMEK 386 (395)
T ss_pred cCCCCceEEEECCCeEEeccCCCHHHHHHHHH--HHHHH
Confidence 65 47899999999999887 7899999999 45554
No 36
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.90 E-value=3.7e-22 Score=200.97 Aligned_cols=247 Identities=18% Similarity=0.141 Sum_probs=142.8
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCCh--------H----HHHHHHHHHHHHHhhcCCCCcEE
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPF--------E----GLVKFVEETVRREHASSPEKPIY 245 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss~--------~----~~~~dl~~~i~~~~~~~~~~~i~ 245 (468)
++|+|||+||++++...|...+..|.++|+|+++|+||||.|+. + .+++++.++++. .+.++++
T Consensus 104 ~~p~vvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~----l~~~~~~ 179 (402)
T PLN02894 104 DAPTLVMVHGYGASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKA----KNLSNFI 179 (402)
T ss_pred CCCEEEEECCCCcchhHHHHHHHHHHhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHH----cCCCCeE
Confidence 57899999999999999999999998889999999999998841 1 234455555554 3455899
Q ss_pred EEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhH---------HHHhhhhcCC--h-
Q 012190 246 LVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAV---------PYLLSYVMGD--P- 313 (468)
Q Consensus 246 LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~--~- 313 (468)
|+||||||.+|+.+|.++|++++++|+++|.......... ................ +.......+. +
T Consensus 180 lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~ 258 (402)
T PLN02894 180 LLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDK-SEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGPN 258 (402)
T ss_pred EEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchh-HHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhHH
Confidence 9999999999999999999999999999986533221100 0000000000000000 0000000000 0
Q ss_pred hhHH-H-HhhccC-----CChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHH----HHhHHHhhhcccCCceE
Q 012190 314 IKMA-M-VNIENR-----LPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLK----SASAYANSRLHAVKAEV 382 (468)
Q Consensus 314 ~~~~-~-~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~~~~~~~~l~~i~~Pv 382 (468)
+... . ...... .+.+. ...+.+.+ .... .....-...+..+. .........+..+++|+
T Consensus 259 l~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~-------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~ 328 (402)
T PLN02894 259 LVRRYTTARFGAHSTGDILSEEE-SKLLTDYV-------YHTL--AAKASGELCLKYIFSFGAFARKPLLESASEWKVPT 328 (402)
T ss_pred HHHHHHHHHhhhcccccccCcch-hhHHHHHH-------HHhh--cCCCchHHHHHHhccCchhhcchHhhhcccCCCCE
Confidence 0000 0 000000 00000 00000000 0000 00000000001110 01122235678899999
Q ss_pred EEEEeCCCCCCCcHHHHHHHHHhCC-CcEEEEeCCCCccccccCcHHHHHHHHhc--Ccccc
Q 012190 383 LVLASGKDNMLPSEDEAKRLNNSLQ-NCIVRNFKDNGHTLLLEEGISLLTIIKGT--CKYRR 441 (468)
Q Consensus 383 LlI~G~~D~~v~~~~~~~~l~~~l~-~~~~~~i~~aGH~~~~e~p~~~~~~I~~~--~F~~r 441 (468)
++|+|++|.+.+ . ..+.+.+..+ .+++++++++||++++|+|++|++.|.+. .|+++
T Consensus 329 liI~G~~D~i~~-~-~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~~ 388 (402)
T PLN02894 329 TFIYGRHDWMNY-E-GAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLSP 388 (402)
T ss_pred EEEEeCCCCCCc-H-HHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhccC
Confidence 999999998776 4 3556666554 68999999999999999999999999954 44444
No 37
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.90 E-value=1.3e-22 Score=195.22 Aligned_cols=260 Identities=20% Similarity=0.197 Sum_probs=163.6
Q ss_pred CccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCC---------hHHH
Q 012190 155 EIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP---------FEGL 224 (468)
Q Consensus 155 ~~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss---------~~~~ 224 (468)
.+...||...++........ ...+||++||++.+..-|..++..| ..||.|+++|+||||.|. +.++
T Consensus 13 ~~~~~d~~~~~~~~~~~~~~---~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~ 89 (298)
T COG2267 13 YFTGADGTRLRYRTWAAPEP---PKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADY 89 (298)
T ss_pred eeecCCCceEEEEeecCCCC---CCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHH
Confidence 34455666633333332222 2368999999999999999999999 789999999999999995 8999
Q ss_pred HHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHH
Q 012190 225 VKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPY 304 (468)
Q Consensus 225 ~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (468)
.+|+..+++......+..+++|+||||||.|++.++.+++..++++||.+|...... ...................+
T Consensus 90 ~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~--~~~~~~~~~~~~~~~~~~~p- 166 (298)
T COG2267 90 VDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGG--AILRLILARLALKLLGRIRP- 166 (298)
T ss_pred HHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCCh--hHHHHHHHHHhccccccccc-
Confidence 999999999988766788999999999999999999999999999999999886653 00000000000000000011
Q ss_pred HhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEE
Q 012190 305 LLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLV 384 (468)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLl 384 (468)
.+..+. ...........+. .+...+.+.. .+.+ ........|....+.............+++|+|+
T Consensus 167 ---~~~~~~-~~~~~~~~~~~sr---~~~~~~~~~~----dP~~--~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLl 233 (298)
T COG2267 167 ---KLPVDS-NLLEGVLTDDLSR---DPAEVAAYEA----DPLI--GVGGPVSRWVDLALLAGRVPALRDAPAIALPVLL 233 (298)
T ss_pred ---ccccCc-ccccCcCcchhhc---CHHHHHHHhc----CCcc--ccCCccHHHHHHHHHhhcccchhccccccCCEEE
Confidence 000000 0000000000000 0111110000 0000 0122333443333333331223445788999999
Q ss_pred EEeCCCCCCC-cHHHHHHHHHhCC--CcEEEEeCCCCccccccCcH---HHHHHHH
Q 012190 385 LASGKDNMLP-SEDEAKRLNNSLQ--NCIVRNFKDNGHTLLLEEGI---SLLTIIK 434 (468)
Q Consensus 385 I~G~~D~~v~-~~~~~~~l~~~l~--~~~~~~i~~aGH~~~~e~p~---~~~~~I~ 434 (468)
++|++|++++ .+ ...++.+... ++++++++|+.|.++.|.+. ++.+.+.
T Consensus 234 l~g~~D~vv~~~~-~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~ 288 (298)
T COG2267 234 LQGGDDRVVDNVE-GLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDIL 288 (298)
T ss_pred EecCCCccccCcH-HHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHH
Confidence 9999999999 67 5777776664 67899999999999999665 4444444
No 38
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.90 E-value=1.6e-22 Score=193.58 Aligned_cols=232 Identities=14% Similarity=0.173 Sum_probs=144.3
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhc-CCeEEEEecCCCCCCC--------ChHHHHHHHHHHHHHHhhcCCCCcEEEEE
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLVG 248 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~-~~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~~~~~~~~~~~i~LvG 248 (468)
++|+|||+||++++...|.++...|. .+|+|+++|+||||.| +++++++++.++++.+. ..++++|+|
T Consensus 17 ~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~---~~~~v~lvG 93 (273)
T PLN02211 17 QPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLP---ENEKVILVG 93 (273)
T ss_pred CCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcC---CCCCEEEEE
Confidence 47899999999999999999999995 5899999999999965 57888888888888742 246899999
Q ss_pred eChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcC-ChhhHHHHhhccCCCh
Q 012190 249 DSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMG-DPIKMAMVNIENRLPP 327 (468)
Q Consensus 249 hS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 327 (468)
|||||.+++.++.++|++|+++|++++.... .............+.... ....+..... .+... ........
T Consensus 94 hS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~--~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~ 166 (273)
T PLN02211 94 HSAGGLSVTQAIHRFPKKICLAVYVAATMLK--LGFQTDEDMKDGVPDLSE--FGDVYELGFGLGPDQP---PTSAIIKK 166 (273)
T ss_pred ECchHHHHHHHHHhChhheeEEEEeccccCC--CCCCHHHHHhccccchhh--hccceeeeeccCCCCC---CceeeeCH
Confidence 9999999999999999999999999774321 110000001000000000 0000000000 00000 00000000
Q ss_pred hHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHH-----HH-hHHHhhhcccC-CceEEEEEeCCCCCCCcHHHHH
Q 012190 328 RIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLK-----SA-SAYANSRLHAV-KAEVLVLASGKDNMLPSEDEAK 400 (468)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~-~~~~~~~l~~i-~~PvLlI~G~~D~~v~~~~~~~ 400 (468)
+....+... ..+.+...+....+. .. .........++ ++|+++|.|++|..+|++ ..+
T Consensus 167 -~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~-~~~ 231 (273)
T PLN02211 167 -EFRRKILYQ-------------MSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPE-QQE 231 (273)
T ss_pred -HHHHHHHhc-------------CCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHH-HHH
Confidence 000000000 000000000000000 00 00001122344 789999999999999999 799
Q ss_pred HHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 401 RLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 401 ~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
.+.+.+++.+++.++ +||.+++++|++++++|.+
T Consensus 232 ~m~~~~~~~~~~~l~-~gH~p~ls~P~~~~~~i~~ 265 (273)
T PLN02211 232 AMIKRWPPSQVYELE-SDHSPFFSTPFLLFGLLIK 265 (273)
T ss_pred HHHHhCCccEEEEEC-CCCCccccCHHHHHHHHHH
Confidence 999999989999997 8999999999999999984
No 39
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.90 E-value=6.7e-22 Score=181.90 Aligned_cols=226 Identities=19% Similarity=0.212 Sum_probs=156.0
Q ss_pred CCCeEEEeCCCCCch-hhHHHhHhhh-cCCeEEEEecCCCCCCC--------ChHHHHHHHHHHHHHHh--hcCCCCcEE
Q 012190 178 GSPTLLFLPGIDGLG-LGLILHHKPL-GKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREH--ASSPEKPIY 245 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~-~~~~~~~~~L-~~~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~~~~--~~~~~~~i~ 245 (468)
....|+++||++... ..|..++..| ..+|.|+++|++|||.| +++..++|+..+++... .+..+.+.+
T Consensus 53 pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~F 132 (313)
T KOG1455|consen 53 PRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRF 132 (313)
T ss_pred CceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCee
Confidence 355899999999987 5777788888 67899999999999999 48999999999999744 445678999
Q ss_pred EEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHh--------hhhcCChhhHH
Q 012190 246 LVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLL--------SYVMGDPIKMA 317 (468)
Q Consensus 246 LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ 317 (468)
|+||||||++++.++.++|+..+|+|+++|........-... ....+...+...+|.+. .....++.
T Consensus 133 L~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p--~v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~--- 207 (313)
T KOG1455|consen 133 LFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHP--PVISILTLLSKLIPTWKIVPTKDIIDVAFKDPE--- 207 (313)
T ss_pred eeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCc--HHHHHHHHHHHhCCceeecCCccccccccCCHH---
Confidence 999999999999999999999999999999875544322111 11111112222222221 11111111
Q ss_pred HHhhccCCChhHHhhhhhhhcchhcchhhhhhccCC-cchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcH
Q 012190 318 MVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIP-KDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSE 396 (468)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~ 396 (468)
..+....+- ..+. ...+.....++ ....++.+.+.++.+|.+++||+.|.++.+.
T Consensus 208 ------------~r~~~~~np-----------l~y~g~pRl~T~~ElL-r~~~~le~~l~~vtvPflilHG~dD~VTDp~ 263 (313)
T KOG1455|consen 208 ------------KRKILRSDP-----------LCYTGKPRLKTAYELL-RVTADLEKNLNEVTVPFLILHGTDDKVTDPK 263 (313)
T ss_pred ------------HHHHhhcCC-----------ceecCCccHHHHHHHH-HHHHHHHHhcccccccEEEEecCCCcccCcH
Confidence 011111100 0011 11222222333 3334456788999999999999999999999
Q ss_pred HHHHHHHHhCC--CcEEEEeCCCCccccc-cCcHHHHHHH
Q 012190 397 DEAKRLNNSLQ--NCIVRNFKDNGHTLLL-EEGISLLTII 433 (468)
Q Consensus 397 ~~~~~l~~~l~--~~~~~~i~~aGH~~~~-e~p~~~~~~I 433 (468)
.++.+++..+ ++++.++||.-|.++. |.++.+....
T Consensus 264 -~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf 302 (313)
T KOG1455|consen 264 -VSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVF 302 (313)
T ss_pred -HHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHH
Confidence 6999998875 8899999999999998 4444444333
No 40
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.89 E-value=2.3e-22 Score=231.73 Aligned_cols=254 Identities=16% Similarity=0.155 Sum_probs=161.4
Q ss_pred CCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC---------------hHHHHH
Q 012190 162 GPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP---------------FEGLVK 226 (468)
Q Consensus 162 ~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss---------------~~~~~~ 226 (468)
+...|++|.+.|.. +++|+|||+||++++...|.+++..|.+.|+|+++|+||||.|+ ++++++
T Consensus 1355 ~~~~~i~~~~~G~~-~~~~~vVllHG~~~s~~~w~~~~~~L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~ 1433 (1655)
T PLN02980 1355 GFSCLIKVHEVGQN-AEGSVVLFLHGFLGTGEDWIPIMKAISGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVAD 1433 (1655)
T ss_pred ceEEEEEEEecCCC-CCCCeEEEECCCCCCHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHH
Confidence 45678888877752 34689999999999999999999999888999999999999873 456778
Q ss_pred HHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHh-----h
Q 012190 227 FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHC-----A 301 (468)
Q Consensus 227 dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 301 (468)
++.++++++ ..++++|+||||||.+++.+|.++|++|+++|++++.......... ............ .
T Consensus 1434 ~l~~ll~~l----~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~---~~~~~~~~~~~~~l~~~g 1506 (1655)
T PLN02980 1434 LLYKLIEHI----TPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVAR---KIRSAKDDSRARMLIDHG 1506 (1655)
T ss_pred HHHHHHHHh----CCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHH---HHHhhhhhHHHHHHHhhh
Confidence 888888773 4569999999999999999999999999999999875432211100 000000000000 0
Q ss_pred HHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHH-HHhHHHhhhcccCCc
Q 012190 302 VPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLK-SASAYANSRLHAVKA 380 (468)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~l~~i~~ 380 (468)
.............. .. ....+ ...+.+...+ .......+...+..+. .......+.+.++++
T Consensus 1507 ~~~~~~~~~~~~~~---~~--~~~~~-~~~~~~~~~~-----------~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~ 1569 (1655)
T PLN02980 1507 LEIFLENWYSGELW---KS--LRNHP-HFNKIVASRL-----------LHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDT 1569 (1655)
T ss_pred HHHHHHHhccHHHh---hh--hccCH-HHHHHHHHHH-----------hcCCHHHHHHHHHHhhhcccchHHHHHhhCCC
Confidence 00000000000000 00 00000 0000000000 0000111111111111 011223356789999
Q ss_pred eEEEEEeCCCCCCCcHHHHHHHHHhCCC------------cEEEEeCCCCccccccCcHHHHHHHHhcCcccccCC
Q 012190 381 EVLVLASGKDNMLPSEDEAKRLNNSLQN------------CIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSRK 444 (468)
Q Consensus 381 PvLlI~G~~D~~v~~~~~~~~l~~~l~~------------~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~~~ 444 (468)
|+|+|+|++|..++ . .++++.+.+++ +++++++++||++++|+|+++++.|. .|+++..+
T Consensus 1570 PtLlI~Ge~D~~~~-~-~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~--~FL~~~~~ 1641 (1655)
T PLN02980 1570 PLLLVVGEKDVKFK-Q-IAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALR--KFLTRLHN 1641 (1655)
T ss_pred CEEEEEECCCCccH-H-HHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHH--HHHHhccc
Confidence 99999999999875 4 46777777765 48999999999999999999999999 78887654
No 41
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.89 E-value=4.5e-22 Score=199.31 Aligned_cols=240 Identities=21% Similarity=0.224 Sum_probs=150.9
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-------ChHHHHHHHHHHHHHHhhcC
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASS 239 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-------s~~~~~~dl~~~i~~~~~~~ 239 (468)
++|...|. .++|+|||+||++++...|..+...|.++|+|+++|+||||.| +++++++++.++++. .
T Consensus 121 i~~~~~g~--~~~~~vl~~HG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~----~ 194 (371)
T PRK14875 121 VRYLRLGE--GDGTPVVLIHGFGGDLNNWLFNHAALAAGRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDA----L 194 (371)
T ss_pred EEEecccC--CCCCeEEEECCCCCccchHHHHHHHHhcCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHh----c
Confidence 35555554 2468999999999999999999999988899999999999988 478889999888887 4
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHH
Q 012190 240 PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMV 319 (468)
Q Consensus 240 ~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (468)
+..+++|+||||||.+++.+|.++|+++.++|+++|......... .....+... .....+..++.....++.
T Consensus 195 ~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~----- 266 (371)
T PRK14875 195 GIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEING-DYIDGFVAA--ESRRELKPVLELLFADPA----- 266 (371)
T ss_pred CCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccch-hHHHHhhcc--cchhHHHHHHHHHhcChh-----
Confidence 445899999999999999999999999999999987642211100 000000000 000001111111111110
Q ss_pred hhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHH---HhHHHhhhcccCCceEEEEEeCCCCCCCcH
Q 012190 320 NIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKS---ASAYANSRLHAVKAEVLVLASGKDNMLPSE 396 (468)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~ 396 (468)
..... ....+..... .. .....+......... ........+.++++|+|+++|++|.++|+.
T Consensus 267 ----~~~~~-~~~~~~~~~~-----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~ 331 (371)
T PRK14875 267 ----LVTRQ-MVEDLLKYKR-----LD-----GVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAA 331 (371)
T ss_pred ----hCCHH-HHHHHHHHhc-----cc-----cHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHH
Confidence 00000 0000000000 00 000000000000000 001122356788999999999999999987
Q ss_pred HHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 397 DEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 397 ~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
..+.+ .+++++.+++++||++++++|+++++.|. .|+++
T Consensus 332 -~~~~l---~~~~~~~~~~~~gH~~~~e~p~~~~~~i~--~fl~~ 370 (371)
T PRK14875 332 -HAQGL---PDGVAVHVLPGAGHMPQMEAAADVNRLLA--EFLGK 370 (371)
T ss_pred -HHhhc---cCCCeEEEeCCCCCChhhhCHHHHHHHHH--HHhcc
Confidence 45543 34689999999999999999999999998 55543
No 42
>PLN02511 hydrolase
Probab=99.88 E-value=4.4e-22 Score=199.66 Aligned_cols=270 Identities=12% Similarity=0.138 Sum_probs=154.7
Q ss_pred cCccCCCCCCc--eeeeecCCCCCCCCCCeEEEeCCCCCchh-hH-HHhHhhh-cCCeEEEEecCCCCCCCC-------h
Q 012190 154 KEIIKPDGGPP--RWFCPVDCGRPLKGSPTLLFLPGIDGLGL-GL-ILHHKPL-GKAFEVRCLHIPVYDRTP-------F 221 (468)
Q Consensus 154 ~~~~~~dg~~~--~~~~y~~~g~~~~~~p~lV~lHG~~~s~~-~~-~~~~~~L-~~~~~V~~~D~~G~G~Ss-------~ 221 (468)
+.+..+||+.. .|...... ....++|+||++||++++.. .| ..++..+ .++|+|+++|+||||.|+ .
T Consensus 74 e~l~~~DG~~~~ldw~~~~~~-~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~ 152 (388)
T PLN02511 74 ECLRTPDGGAVALDWVSGDDR-ALPADAPVLILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQFYS 152 (388)
T ss_pred EEEECCCCCEEEEEecCcccc-cCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCEEc
Confidence 34567788763 34432111 11235789999999977654 34 4455544 789999999999999984 2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCC--ceEEEEeCCCCCCCCCCcCcchHHHhhCchhHH
Q 012190 222 EGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTI--DLILILSNPATSFGRSQLQPLFPILKAMPDELH 299 (468)
Q Consensus 222 ~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~--v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~ 299 (468)
..+++|+.++++++....+..+++++||||||.+++.++.++|+. +.++++++++....... ..+...+.....
T Consensus 153 ~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~v~~~v~is~p~~l~~~~----~~~~~~~~~~y~ 228 (388)
T PLN02511 153 ASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCPLSGAVSLCNPFDLVIAD----EDFHKGFNNVYD 228 (388)
T ss_pred CCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCCceEEEEECCCcCHHHHH----HHHhccHHHHHH
Confidence 467889999999988877778999999999999999999999987 88888887654321000 000000000000
Q ss_pred hhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhcc-CCcchhHHHHHHHHHHhHHHhhhcccC
Q 012190 300 CAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDI-IPKDTLLWKLKLLKSASAYANSRLHAV 378 (468)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~l~~i 378 (468)
..+...+..+.... ...+.......... .+. ...........+... ....... ..+.. ......+.++
T Consensus 229 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~~----~~~-~~~~~~~fd~~~t~~~~gf~~~~---~yy~~--~s~~~~L~~I 297 (388)
T PLN02511 229 KALAKALRKIFAKH-ALLFEGLGGEYNIP----LVA-NAKTVRDFDDGLTRVSFGFKSVD---AYYSN--SSSSDSIKHV 297 (388)
T ss_pred HHHHHHHHHHHHHH-HHHHhhCCCccCHH----HHH-hCCCHHHHHHhhhhhcCCCCCHH---HHHHH--cCchhhhccC
Confidence 00000000000000 00000000000000 000 000000000000000 0000000 00110 1123567899
Q ss_pred CceEEEEEeCCCCCCCcHHHH-HHHHHhCCCcEEEEeCCCCccccccCcHH------HHHHHHhcCccccc
Q 012190 379 KAEVLVLASGKDNMLPSEDEA-KRLNNSLQNCIVRNFKDNGHTLLLEEGIS------LLTIIKGTCKYRRS 442 (468)
Q Consensus 379 ~~PvLlI~G~~D~~v~~~~~~-~~l~~~l~~~~~~~i~~aGH~~~~e~p~~------~~~~I~~~~F~~r~ 442 (468)
++|+|+|+|++|+++|+. .. ..+.+.++++++++++++||..++|.|+. +.+.+. +|++..
T Consensus 298 ~vPtLiI~g~dDpi~p~~-~~~~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~--~Fl~~~ 365 (388)
T PLN02511 298 RVPLLCIQAANDPIAPAR-GIPREDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVM--EFLEAL 365 (388)
T ss_pred CCCeEEEEcCCCCcCCcc-cCcHhHHhcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHH--HHHHHH
Confidence 999999999999999987 33 45677789999999999999999999875 467777 565543
No 43
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.88 E-value=5.7e-21 Score=167.42 Aligned_cols=213 Identities=17% Similarity=0.205 Sum_probs=150.1
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC-------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeC
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S-------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS 250 (468)
+..|+|+|||.|+....+.+.+.| .++|.|+++.+||||.. +.+||.+++.+..+++... +...|.++|-|
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~-gy~eI~v~GlS 93 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEA-GYDEIAVVGLS 93 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHc-CCCeEEEEeec
Confidence 468999999999999999999999 77899999999999965 6899999999999988743 45689999999
Q ss_pred hhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHH
Q 012190 251 FGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIK 330 (468)
Q Consensus 251 ~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (468)
|||.+|+.+|.++| ++++|.+|++..... +.. ++..+..... . +..+ ...+.+..
T Consensus 94 mGGv~alkla~~~p--~K~iv~m~a~~~~k~--~~~---iie~~l~y~~----~-~kk~-------------e~k~~e~~ 148 (243)
T COG1647 94 MGGVFALKLAYHYP--PKKIVPMCAPVNVKS--WRI---IIEGLLEYFR----N-AKKY-------------EGKDQEQI 148 (243)
T ss_pred chhHHHHHHHhhCC--ccceeeecCCccccc--chh---hhHHHHHHHH----H-hhhc-------------cCCCHHHH
Confidence 99999999999998 899999988664211 111 1111110000 0 0000 11111111
Q ss_pred hhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC--C
Q 012190 331 LEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ--N 408 (468)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~--~ 408 (468)
.+++.. +. ++.......+..........+..|..|++++.|.+|+++|.+ .++.+.+... +
T Consensus 149 ~~e~~~---------------~~-~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~-sA~~Iy~~v~s~~ 211 (243)
T COG1647 149 DKEMKS---------------YK-DTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAE-SANFIYDHVESDD 211 (243)
T ss_pred HHHHHH---------------hh-cchHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHH-HHHHHHHhccCCc
Confidence 111111 11 001111122223333345677899999999999999999999 6999988774 7
Q ss_pred cEEEEeCCCCccccccC-cHHHHHHHH
Q 012190 409 CIVRNFKDNGHTLLLEE-GISLLTIIK 434 (468)
Q Consensus 409 ~~~~~i~~aGH~~~~e~-p~~~~~~I~ 434 (468)
.++.+++++||.+..+. -+.+.+.+.
T Consensus 212 KeL~~~e~SgHVIt~D~Erd~v~e~V~ 238 (243)
T COG1647 212 KELKWLEGSGHVITLDKERDQVEEDVI 238 (243)
T ss_pred ceeEEEccCCceeecchhHHHHHHHHH
Confidence 79999999999998874 456666666
No 44
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.87 E-value=5.8e-21 Score=186.18 Aligned_cols=113 Identities=20% Similarity=0.226 Sum_probs=86.6
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCC---------hHHHH
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP---------FEGLV 225 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss---------~~~~~ 225 (468)
+...||.. ++|...|.+ ++++|||+||++++...+ .....+ .++|+|+++|+||||.|+ .++++
T Consensus 9 ~~~~~~~~---l~y~~~g~~--~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 82 (306)
T TIGR01249 9 LNVSDNHQ---LYYEQSGNP--DGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLV 82 (306)
T ss_pred EEcCCCcE---EEEEECcCC--CCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHH
Confidence 34445554 456666652 467899999988776543 333344 468999999999999883 45678
Q ss_pred HHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCC
Q 012190 226 KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (468)
Q Consensus 226 ~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~ 278 (468)
+++..+++++ +.++++++||||||.+++.++.++|++++++|++++...
T Consensus 83 ~dl~~l~~~l----~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~ 131 (306)
T TIGR01249 83 ADIEKLREKL----GIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLL 131 (306)
T ss_pred HHHHHHHHHc----CCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccC
Confidence 8888888773 445899999999999999999999999999999987553
No 45
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.87 E-value=7.2e-21 Score=187.06 Aligned_cols=251 Identities=15% Similarity=0.147 Sum_probs=149.4
Q ss_pred cCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchh-hH-------------------------HHhHhhh-cCCeEEE
Q 012190 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGL-GL-------------------------ILHHKPL-GKAFEVR 209 (468)
Q Consensus 157 ~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~-~~-------------------------~~~~~~L-~~~~~V~ 209 (468)
...||...++..+.+. . .+.+|+++||++.+.. .+ ..+++.| .++|.|+
T Consensus 3 ~~~~g~~l~~~~~~~~-~---~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~ 78 (332)
T TIGR01607 3 RNKDGLLLKTYSWIVK-N---AIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVY 78 (332)
T ss_pred cCCCCCeEEEeeeecc-C---CeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEE
Confidence 3456665444443332 2 2568999999999986 22 3567888 7789999
Q ss_pred EecCCCCCCCC-----------hHHHHHHHHHHHHHHhh-------------------cCC-CCcEEEEEeChhHHHHHH
Q 012190 210 CLHIPVYDRTP-----------FEGLVKFVEETVRREHA-------------------SSP-EKPIYLVGDSFGGCLALA 258 (468)
Q Consensus 210 ~~D~~G~G~Ss-----------~~~~~~dl~~~i~~~~~-------------------~~~-~~~i~LvGhS~GG~ia~~ 258 (468)
++|+||||+|+ ++++++|+..+++.... ..+ +.|++|+||||||.+++.
T Consensus 79 ~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~ 158 (332)
T TIGR01607 79 GLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALR 158 (332)
T ss_pred EecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHH
Confidence 99999999773 67788899988887653 233 679999999999999999
Q ss_pred HHHhCCC--------CceEEEEeCCCCCCCCCCcC---cchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCCh
Q 012190 259 VAARNPT--------IDLILILSNPATSFGRSQLQ---PLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPP 327 (468)
Q Consensus 259 ~a~~~P~--------~v~~lVli~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (468)
++.++++ .++|+|+++|+......... ........+...+....+.+ ....... ....+
T Consensus 159 ~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~---~~~~~~~-------~~~~~ 228 (332)
T TIGR01607 159 LLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTF---RISKKIR-------YEKSP 228 (332)
T ss_pred HHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcc---cccCccc-------cccCh
Confidence 9987643 58999999987643211100 00000000000000000000 0000000 00000
Q ss_pred hHHhhhhhh-hcchhcchhhhhhccCC-cchhHHHHHHHHHHhHHHhhhcccC--CceEEEEEeCCCCCCCcHHHHHHHH
Q 012190 328 RIKLEQLSN-NLPALLPRLSVMSDIIP-KDTLLWKLKLLKSASAYANSRLHAV--KAEVLVLASGKDNMLPSEDEAKRLN 403 (468)
Q Consensus 328 ~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~l~~i--~~PvLlI~G~~D~~v~~~~~~~~l~ 403 (468)
.. .+.+.. .+. +. .-+..+....+.. .......+..+ ++|+|+|+|++|.+++++ ..+.+.
T Consensus 229 ~~-~~~~~~Dp~~------------~~~~~s~~~~~~l~~~-~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~-~~~~~~ 293 (332)
T TIGR01607 229 YV-NDIIKFDKFR------------YDGGITFNLASELIKA-TDTLDCDIDYIPKDIPILFIHSKGDCVCSYE-GTVSFY 293 (332)
T ss_pred hh-hhHHhcCccc------------cCCcccHHHHHHHHHH-HHHHHhhHhhCCCCCCEEEEEeCCCCccCHH-HHHHHH
Confidence 00 111110 000 00 1112222222221 11222334455 799999999999999999 688887
Q ss_pred HhC--CCcEEEEeCCCCccccccC-cHHHHHHHHhc
Q 012190 404 NSL--QNCIVRNFKDNGHTLLLEE-GISLLTIIKGT 436 (468)
Q Consensus 404 ~~l--~~~~~~~i~~aGH~~~~e~-p~~~~~~I~~~ 436 (468)
+.. ++++++++++++|.++.|. .+++.+.|.+|
T Consensus 294 ~~~~~~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~w 329 (332)
T TIGR01607 294 NKLSISNKELHTLEDMDHVITIEPGNEEVLKKIIEW 329 (332)
T ss_pred HhccCCCcEEEEECCCCCCCccCCCHHHHHHHHHHH
Confidence 765 4789999999999999986 57788888754
No 46
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.86 E-value=1.4e-20 Score=176.17 Aligned_cols=243 Identities=17% Similarity=0.184 Sum_probs=159.8
Q ss_pred CCCCeEEEeCCCCCchhhHHHhHhhhcC--CeEEEEecCCCCCCC------ChHHHHHHHHHHHHHHhhcCCCCcEEEEE
Q 012190 177 KGSPTLLFLPGIDGLGLGLILHHKPLGK--AFEVRCLHIPVYDRT------PFEGLVKFVEETVRREHASSPEKPIYLVG 248 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~~~~L~~--~~~V~~~D~~G~G~S------s~~~~~~dl~~~i~~~~~~~~~~~i~LvG 248 (468)
...|+++++||+.|++..|+.+...|++ +..|+++|.|.||.| +.+.+++|+..+++..+......+++|+|
T Consensus 50 ~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~G 129 (315)
T KOG2382|consen 50 ERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFIDGVGGSTRLDPVVLLG 129 (315)
T ss_pred CCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCccccccCHHHHHHHHHHHHHHcccccccCCceecc
Confidence 3588999999999999999999999954 579999999999999 48999999999999976433456899999
Q ss_pred eChhH-HHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHH---hhCchh------HHhhHHHHhhhhcCChhhHHH
Q 012190 249 DSFGG-CLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPIL---KAMPDE------LHCAVPYLLSYVMGDPIKMAM 318 (468)
Q Consensus 249 hS~GG-~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~---~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 318 (468)
||||| .+++..+..+|+.+..+|+++-..............++ ...+.. .....+.+........
T Consensus 130 HsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~----- 204 (315)
T KOG2382|consen 130 HSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNL----- 204 (315)
T ss_pred cCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchH-----
Confidence 99999 88888888999999999998866531111111111111 111111 0111111111110000
Q ss_pred HhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhc--ccCCceEEEEEeCCCCCCCcH
Q 012190 319 VNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRL--HAVKAEVLVLASGKDNMLPSE 396 (468)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l--~~i~~PvLlI~G~~D~~v~~~ 396 (468)
..+-+..++.. ...-......++.+.+...+..+. ....+..+ .....|||++.|.++..++.+
T Consensus 205 -----------~~~fi~~nl~~-~~~~~s~~w~~nl~~i~~~~~~~~--~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~ 270 (315)
T KOG2382|consen 205 -----------VRQFILTNLKK-SPSDGSFLWRVNLDSIASLLDEYE--ILSYWADLEDGPYTGPVLFIKGLQSKFVPDE 270 (315)
T ss_pred -----------HHHHHHHhcCc-CCCCCceEEEeCHHHHHHHHHHHH--hhcccccccccccccceeEEecCCCCCcChh
Confidence 01111111110 000011111122222222222211 11112222 566899999999999999999
Q ss_pred HHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 397 DEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 397 ~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
...++.+.+|+++++.++++||++|.|+|+++.+.|.+ |+.+
T Consensus 271 -~~~~~~~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~--Fl~~ 312 (315)
T KOG2382|consen 271 -HYPRMEKIFPNVEVHELDEAGHWVHLEKPEEFIESISE--FLEE 312 (315)
T ss_pred -HHHHHHHhccchheeecccCCceeecCCHHHHHHHHHH--Hhcc
Confidence 79999999999999999999999999999999999995 7655
No 47
>PRK13604 luxD acyl transferase; Provisional
Probab=99.86 E-value=6.3e-20 Score=173.78 Aligned_cols=256 Identities=14% Similarity=0.087 Sum_probs=157.0
Q ss_pred cCCCCCCc-eeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCC-CCCC-------hHHHHH
Q 012190 157 IKPDGGPP-RWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVY-DRTP-------FEGLVK 226 (468)
Q Consensus 157 ~~~dg~~~-~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~-G~Ss-------~~~~~~ 226 (468)
...||..+ .|+.+..... .+..++||++||+++....+..+++.| .+||.|+.+|+||| |.|+ +.....
T Consensus 15 ~~~dG~~L~Gwl~~P~~~~-~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~s~g~~ 93 (307)
T PRK13604 15 CLENGQSIRVWETLPKENS-PKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTMSIGKN 93 (307)
T ss_pred EcCCCCEEEEEEEcCcccC-CCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCcccccHH
Confidence 34556554 4555543211 234679999999999988899999999 77999999999988 8873 344577
Q ss_pred HHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHh
Q 012190 227 FVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLL 306 (468)
Q Consensus 227 dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (468)
|+..+++.+... ...++.|+||||||.+|+..|+.. .++++|+.+|..... ..+..........++
T Consensus 94 Dl~aaid~lk~~-~~~~I~LiG~SmGgava~~~A~~~--~v~~lI~~sp~~~l~--------d~l~~~~~~~~~~~p--- 159 (307)
T PRK13604 94 SLLTVVDWLNTR-GINNLGLIAASLSARIAYEVINEI--DLSFLITAVGVVNLR--------DTLERALGYDYLSLP--- 159 (307)
T ss_pred HHHHHHHHHHhc-CCCceEEEEECHHHHHHHHHhcCC--CCCEEEEcCCcccHH--------HHHHHhhhcccccCc---
Confidence 888888887764 456899999999999997777643 389999999866421 111100000000000
Q ss_pred hhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEE
Q 012190 307 SYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLA 386 (468)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~ 386 (468)
...-+....+ ...... ...+.+... . +..... ....+.+..+++|+|+||
T Consensus 160 --~~~lp~~~d~----~g~~l~--~~~f~~~~~----------~-~~~~~~-----------~s~i~~~~~l~~PvLiIH 209 (307)
T PRK13604 160 --IDELPEDLDF----EGHNLG--SEVFVTDCF----------K-HGWDTL-----------DSTINKMKGLDIPFIAFT 209 (307)
T ss_pred --cccccccccc----cccccc--HHHHHHHHH----------h-cCcccc-----------ccHHHHHhhcCCCEEEEE
Confidence 0000000000 000000 000110000 0 000000 011233466789999999
Q ss_pred eCCCCCCCcHHHHHHHHHhCC--CcEEEEeCCCCccccccCcHH---HHHHHHhcCcccccCCCCCCCCCCCCCHHHH
Q 012190 387 SGKDNMLPSEDEAKRLNNSLQ--NCIVRNFKDNGHTLLLEEGIS---LLTIIKGTCKYRRSRKLDSVADFLPPSRQEF 459 (468)
Q Consensus 387 G~~D~~v~~~~~~~~l~~~l~--~~~~~~i~~aGH~~~~e~p~~---~~~~I~~~~F~~r~~~~~~v~~~~~~~~~~~ 459 (468)
|+.|.++|.+ .++.+.+.++ +++++.++|++|.+.. ++.- +-+.+.+...--.+...|...+++.|+.+++
T Consensus 210 G~~D~lVp~~-~s~~l~e~~~s~~kkl~~i~Ga~H~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (307)
T PRK13604 210 ANNDSWVKQS-EVIDLLDSIRSEQCKLYSLIGSSHDLGE-NLVVLRNFYQSVTKAAIALDNGSLDLDVDIIEPSFEDL 285 (307)
T ss_pred cCCCCccCHH-HHHHHHHHhccCCcEEEEeCCCccccCc-chHHHHHHHHHHHHHHheecCCcccccccccCCCHHHH
Confidence 9999999999 7999999875 7999999999999864 3322 2222222222334455688999999998875
No 48
>PRK05855 short chain dehydrogenase; Validated
Probab=99.85 E-value=1.7e-20 Score=199.18 Aligned_cols=268 Identities=15% Similarity=0.141 Sum_probs=149.5
Q ss_pred cCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC---------hHHHHHH
Q 012190 157 IKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP---------FEGLVKF 227 (468)
Q Consensus 157 ~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss---------~~~~~~d 227 (468)
...||.. ++|...|.+ ++|+|||+||++++...|.++++.|.++|+|+++|+||||.|+ ++++++|
T Consensus 8 ~~~~g~~---l~~~~~g~~--~~~~ivllHG~~~~~~~w~~~~~~L~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~d 82 (582)
T PRK05855 8 VSSDGVR---LAVYEWGDP--DRPTVVLVHGYPDNHEVWDGVAPLLADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADD 82 (582)
T ss_pred EeeCCEE---EEEEEcCCC--CCCeEEEEcCCCchHHHHHHHHHHhhcceEEEEecCCCCCCCCCCCcccccCHHHHHHH
Confidence 3445555 455556642 4789999999999999999999999889999999999999883 7889999
Q ss_pred HHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHh--CCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHH
Q 012190 228 VEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYL 305 (468)
Q Consensus 228 l~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~--~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (468)
+..+++.+. ..++++|+||||||.+++.++.+ .++.+..+++++++.......+... ......+..........
T Consensus 83 l~~~i~~l~---~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 158 (582)
T PRK05855 83 FAAVIDAVS---PDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRS-GLRRPTPRRLARALGQL 158 (582)
T ss_pred HHHHHHHhC---CCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhh-cccccchhhhhHHHHHH
Confidence 999999853 23469999999999999888776 2344544444443211000000000 00000000000000000
Q ss_pred hh----hhcCCh-hhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHH--hHHHhhhcccC
Q 012190 306 LS----YVMGDP-IKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA--SAYANSRLHAV 378 (468)
Q Consensus 306 ~~----~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~l~~i 378 (468)
.. .....+ +.... ...... .. .....+................ +........+... .......+..+
T Consensus 159 ~~~~~~~~~~~~~~~~~~--~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (582)
T PRK05855 159 LRSWYIYLFHLPVLPELL--WRLGLG-RA-WPRLLRRVEGTPVDPIPTQTTL--SDGAHGVKLYRANMIRSLSRPRERYT 232 (582)
T ss_pred hhhHHHHHHhCCCCcHHH--hccchh-hH-HHHhhhhccCCCcchhhhhhhh--ccccchHHHHHhhhhhhhccCccCCc
Confidence 00 000000 00000 000000 00 0000000000000000000000 0000000000000 00111234568
Q ss_pred CceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccccC
Q 012190 379 KAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSR 443 (468)
Q Consensus 379 ~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~~ 443 (468)
++|+|+|+|++|.++++. ..+.+.+.+++.++++++ +||++++|+|+++++.|. .|+.+..
T Consensus 233 ~~P~lii~G~~D~~v~~~-~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~--~fl~~~~ 293 (582)
T PRK05855 233 DVPVQLIVPTGDPYVRPA-LYDDLSRWVPRLWRREIK-AGHWLPMSHPQVLAAAVA--EFVDAVE 293 (582)
T ss_pred cCceEEEEeCCCcccCHH-HhccccccCCcceEEEcc-CCCcchhhChhHHHHHHH--HHHHhcc
Confidence 999999999999999998 688888888888888886 799999999999999999 5665543
No 49
>PRK10985 putative hydrolase; Provisional
Probab=99.84 E-value=6.4e-20 Score=180.11 Aligned_cols=253 Identities=15% Similarity=0.148 Sum_probs=141.9
Q ss_pred cCccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchh--hHHHhHhhh-cCCeEEEEecCCCCCCCCh-------HH
Q 012190 154 KEIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGL--GLILHHKPL-GKAFEVRCLHIPVYDRTPF-------EG 223 (468)
Q Consensus 154 ~~~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~--~~~~~~~~L-~~~~~V~~~D~~G~G~Ss~-------~~ 223 (468)
+.+..+||+... +.+...+....++|+||++||++++.. .+..+++.| ..+|+|+++|+||||.+.. ..
T Consensus 34 ~~~~~~dg~~~~-l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~ 112 (324)
T PRK10985 34 QRLELPDGDFVD-LAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSG 112 (324)
T ss_pred eEEECCCCCEEE-EecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCC
Confidence 345667776521 111111111234789999999988744 345577777 6789999999999997631 23
Q ss_pred HHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCC--ceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhh
Q 012190 224 LVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTI--DLILILSNPATSFGRSQLQPLFPILKAMPDELHCA 301 (468)
Q Consensus 224 ~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~--v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (468)
..+|+..+++.+....+..+++++||||||.+++.+++++++. +.++|+++++........ .+...........
T Consensus 113 ~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~----~~~~~~~~~~~~~ 188 (324)
T PRK10985 113 ETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSY----RMEQGFSRVYQRY 188 (324)
T ss_pred chHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHH----HHhhhHHHHHHHH
Confidence 4677777777776656677899999999999988888887654 889999888653211100 0000000000000
Q ss_pred HHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccC--CcchhHHHHHHHHHHhHHHhhhcccCC
Q 012190 302 VPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDII--PKDTLLWKLKLLKSASAYANSRLHAVK 379 (468)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~l~~i~ 379 (468)
+...+... ............... .+.+ .... .+....+.+ +...+......+.... ....+.+++
T Consensus 189 l~~~l~~~----~~~~~~~~~~~~~~~--~~~~-~~~~----~~~~fd~~~~~~~~g~~~~~~~y~~~~--~~~~l~~i~ 255 (324)
T PRK10985 189 LLNLLKAN----AARKLAAYPGTLPIN--LAQL-KSVR----RLREFDDLITARIHGFADAIDYYRQCS--ALPLLNQIR 255 (324)
T ss_pred HHHHHHHH----HHHHHHhccccccCC--HHHH-hcCC----cHHHHhhhheeccCCCCCHHHHHHHCC--hHHHHhCCC
Confidence 00000000 000000000000000 0000 0000 000000000 1001111111121111 235668999
Q ss_pred ceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccC
Q 012190 380 AEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEE 425 (468)
Q Consensus 380 ~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~ 425 (468)
+|+++|+|++|++++++ ..+.+.+..++.++++++++||+.++|.
T Consensus 256 ~P~lii~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 256 KPTLIIHAKDDPFMTHE-VIPKPESLPPNVEYQLTEHGGHVGFVGG 300 (324)
T ss_pred CCEEEEecCCCCCCChh-hChHHHHhCCCeEEEECCCCCceeeCCC
Confidence 99999999999999988 5777777888999999999999999985
No 50
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.84 E-value=2.9e-19 Score=178.07 Aligned_cols=272 Identities=14% Similarity=0.071 Sum_probs=164.4
Q ss_pred ccCCCCCCc--eeeeecCCCCCC-CCCCeEEEeCCCCCchhh-------------HHHhH---hhh-cCCeEEEEecCCC
Q 012190 156 IIKPDGGPP--RWFCPVDCGRPL-KGSPTLLFLPGIDGLGLG-------------LILHH---KPL-GKAFEVRCLHIPV 215 (468)
Q Consensus 156 ~~~~dg~~~--~~~~y~~~g~~~-~~~p~lV~lHG~~~s~~~-------------~~~~~---~~L-~~~~~V~~~D~~G 215 (468)
+....|..+ .-+.|...|... ...++||++|++.++... |..++ +.| ...|.|+|+|..|
T Consensus 30 f~l~~G~~l~~~~~~Y~t~G~ln~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG 109 (389)
T PRK06765 30 FTTEGGRTIPDVQMGYETYGTLNRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLC 109 (389)
T ss_pred EEccCCCCcCCceEEEEeccccCCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccC
Confidence 444444432 346788888753 346899999999986521 54444 445 5679999999987
Q ss_pred CCC--------C--------------------ChHHHHHHHHHHHHHHhhcCCCCcEE-EEEeChhHHHHHHHHHhCCCC
Q 012190 216 YDR--------T--------------------PFEGLVKFVEETVRREHASSPEKPIY-LVGDSFGGCLALAVAARNPTI 266 (468)
Q Consensus 216 ~G~--------S--------------------s~~~~~~dl~~~i~~~~~~~~~~~i~-LvGhS~GG~ia~~~a~~~P~~ 266 (468)
-|. + +++++++++..+++++ +.+++. ++||||||++|+.+|.++|++
T Consensus 110 ~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~l----gi~~~~~vvG~SmGG~ial~~a~~~P~~ 185 (389)
T PRK06765 110 NVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSL----GIARLHAVMGPSMGGMQAQEWAVHYPHM 185 (389)
T ss_pred CCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHc----CCCCceEEEEECHHHHHHHHHHHHChHh
Confidence 542 1 4789999999999884 444775 999999999999999999999
Q ss_pred ceEEEEeCCCCCCCCCCcCcchH----HHhhCchhHH----------hhH--HHHhhhhc-CChhhHHHHhhccC----C
Q 012190 267 DLILILSNPATSFGRSQLQPLFP----ILKAMPDELH----------CAV--PYLLSYVM-GDPIKMAMVNIENR----L 325 (468)
Q Consensus 267 v~~lVli~p~~~~~~~~~~~~~~----~~~~~~~~~~----------~~~--~~~~~~~~-~~~~~~~~~~~~~~----~ 325 (468)
++++|++++.............. .+..-+.+.. ..+ ...+.... ..+..+. ...... .
T Consensus 186 v~~lv~ia~~~~~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~-~~f~r~~~~~~ 264 (389)
T PRK06765 186 VERMIGVIGNPQNDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYE-TTFPRNASIEV 264 (389)
T ss_pred hheEEEEecCCCCChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHH-HHcCcCccccc
Confidence 99999998765322111001111 1111111000 000 00000000 0000000 000000 0
Q ss_pred C------hhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhH-----HHhhhcccCCceEEEEEeCCCCCCC
Q 012190 326 P------PRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASA-----YANSRLHAVKAEVLVLASGKDNMLP 394 (468)
Q Consensus 326 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~l~~i~~PvLlI~G~~D~~v~ 394 (468)
. .....+.+.+. ........+....+....+.+...+. ...+.+.++++|+|+|+|++|.++|
T Consensus 265 ~~~~~~~~~~~~e~yl~~------~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p 338 (389)
T PRK06765 265 DPYEKVSTLTSFEKEINK------ATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQP 338 (389)
T ss_pred cccccccchhhHHHHHHH------HHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCC
Confidence 0 00000011100 01112233444455555555544321 2356778999999999999999999
Q ss_pred cHHHHHHHHHhCC----CcEEEEeCC-CCccccccCcHHHHHHHHhcCcccc
Q 012190 395 SEDEAKRLNNSLQ----NCIVRNFKD-NGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 395 ~~~~~~~l~~~l~----~~~~~~i~~-aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
++ ..+.+.+.++ +++++++++ +||+.++|+|+++++.|. .|+.+
T Consensus 339 ~~-~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~--~FL~~ 387 (389)
T PRK06765 339 PR-YNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIY--EFLNR 387 (389)
T ss_pred HH-HHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHH--HHHcc
Confidence 99 6888998886 689999985 999999999999999999 66654
No 51
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.81 E-value=2e-18 Score=174.08 Aligned_cols=207 Identities=14% Similarity=0.081 Sum_probs=130.9
Q ss_pred CCCeEEEeCCCCCch-hhHHHhHhhh-cCCeEEEEecCCCCCCCCh----HHHHHHHHHHHHHHhhc--CCCCcEEEEEe
Q 012190 178 GSPTLLFLPGIDGLG-LGLILHHKPL-GKAFEVRCLHIPVYDRTPF----EGLVKFVEETVRREHAS--SPEKPIYLVGD 249 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~-~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss~----~~~~~dl~~~i~~~~~~--~~~~~i~LvGh 249 (468)
..|+||++||+++.. ..|..+++.| ..||.|+++|+||+|.|.- .+.......+++.+... ....+|.++||
T Consensus 193 ~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~ 272 (414)
T PRK05077 193 PFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQAVLNALPNVPWVDHTRVAAFGF 272 (414)
T ss_pred CccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCccccHHHHHHHHHHHHHhCcccCcccEEEEEE
Confidence 467888888877764 4677788888 6689999999999998832 22222223444443322 13468999999
Q ss_pred ChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhH
Q 012190 250 SFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRI 329 (468)
Q Consensus 250 S~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (468)
||||.+|+.+|..+|++++++|+++|........ ......++......+ ...++.+ ..+
T Consensus 273 S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~----~~~~~~~p~~~~~~l----a~~lg~~----------~~~--- 331 (414)
T PRK05077 273 RFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTD----PKRQQQVPEMYLDVL----ASRLGMH----------DAS--- 331 (414)
T ss_pred ChHHHHHHHHHHhCCcCceEEEEECCccchhhcc----hhhhhhchHHHHHHH----HHHhCCC----------CCC---
Confidence 9999999999999999999999998865311000 001111111100000 0000000 000
Q ss_pred HhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhc-ccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCC
Q 012190 330 KLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRL-HAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQN 408 (468)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l-~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~ 408 (468)
.+.+.. .+..+.... ...+ .++++|+|+|+|++|.++|++ ..+.+.+..++
T Consensus 332 -~~~l~~-----------------------~l~~~sl~~---~~~l~~~i~~PvLiI~G~~D~ivP~~-~a~~l~~~~~~ 383 (414)
T PRK05077 332 -DEALRV-----------------------ELNRYSLKV---QGLLGRRCPTPMLSGYWKNDPFSPEE-DSRLIASSSAD 383 (414)
T ss_pred -hHHHHH-----------------------Hhhhccchh---hhhhccCCCCcEEEEecCCCCCCCHH-HHHHHHHhCCC
Confidence 000000 000000000 0111 578999999999999999999 79999999999
Q ss_pred cEEEEeCCCCccccccCcHHHHHHHHhc
Q 012190 409 CIVRNFKDNGHTLLLEEGISLLTIIKGT 436 (468)
Q Consensus 409 ~~~~~i~~aGH~~~~e~p~~~~~~I~~~ 436 (468)
.++++++++ ++.+.++++.+.|.+|
T Consensus 384 ~~l~~i~~~---~~~e~~~~~~~~i~~w 408 (414)
T PRK05077 384 GKLLEIPFK---PVYRNFDKALQEISDW 408 (414)
T ss_pred CeEEEccCC---CccCCHHHHHHHHHHH
Confidence 999999986 5667999999999843
No 52
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.80 E-value=3.2e-18 Score=163.96 Aligned_cols=227 Identities=14% Similarity=0.069 Sum_probs=133.8
Q ss_pred CCeEEEeCCCCC----chhhHHHhHhhh-cCCeEEEEecCCCCCCC-----ChHHHHHHHHHHHHHHhhcC-CCCcEEEE
Q 012190 179 SPTLLFLPGIDG----LGLGLILHHKPL-GKAFEVRCLHIPVYDRT-----PFEGLVKFVEETVRREHASS-PEKPIYLV 247 (468)
Q Consensus 179 ~p~lV~lHG~~~----s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S-----s~~~~~~dl~~~i~~~~~~~-~~~~i~Lv 247 (468)
++.+|++||.++ +...+..+++.| ..+|.|+++|+||||.| +++++.+|+.++++.+.... +.++++++
T Consensus 26 ~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~ 105 (274)
T TIGR03100 26 TTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGENLGFEGIDADIAAAIDAFREAAPHLRRIVAW 105 (274)
T ss_pred CCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCCcEEEE
Confidence 456777777653 344567788888 56899999999999988 46778889999998876543 34579999
Q ss_pred EeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhH-HHHhhhhcCChhhHHHHhhccCCC
Q 012190 248 GDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAV-PYLLSYVMGDPIKMAMVNIENRLP 326 (468)
Q Consensus 248 GhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 326 (468)
||||||.+++.+|.. ++.++++|+++|........... ..... ...... ......+.. ..++
T Consensus 106 G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~-----------g~~~ 168 (274)
T TIGR03100 106 GLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAAS---RIRHY--YLGQLLSADFWRKLLS-----------GEVN 168 (274)
T ss_pred EECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHH---HHHHH--HHHHHhChHHHHHhcC-----------CCcc
Confidence 999999999988765 47899999999864321111100 00000 000000 000000000 1111
Q ss_pred hhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHH----HHH
Q 012190 327 PRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEA----KRL 402 (468)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~----~~l 402 (468)
.......+...+.... . ........ .....+...+..+++|+|+++|++|...+...+. ...
T Consensus 169 ~~~~~~~~~~~~~~~~---~-----~~~~~~~~------~~~~~~~~~l~~~~~P~ll~~g~~D~~~~~~~~~~~~~~~~ 234 (274)
T TIGR03100 169 LGSSLRGLGDALLKAR---Q-----KGDEVAHG------GLAERMKAGLERFQGPVLFILSGNDLTAQEFADSVLGEPAW 234 (274)
T ss_pred HHHHHHHHHHHHHhhh---h-----cCCCcccc------hHHHHHHHHHHhcCCcEEEEEcCcchhHHHHHHHhccChhh
Confidence 1111111111100000 0 00000000 0222234566778999999999999886422000 444
Q ss_pred HHhC--CCcEEEEeCCCCccccccC-cHHHHHHHHhc
Q 012190 403 NNSL--QNCIVRNFKDNGHTLLLEE-GISLLTIIKGT 436 (468)
Q Consensus 403 ~~~l--~~~~~~~i~~aGH~~~~e~-p~~~~~~I~~~ 436 (468)
.+.+ ++++++.+++++|++..|. ++++.+.|.+|
T Consensus 235 ~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~w 271 (274)
T TIGR03100 235 RGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEW 271 (274)
T ss_pred HHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHH
Confidence 4545 7899999999999995554 58899999943
No 53
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.80 E-value=2.4e-19 Score=154.21 Aligned_cols=228 Identities=17% Similarity=0.167 Sum_probs=151.3
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchh-hHHHhHhhhc--CCeEEEEecCCCCCCCC----------hHHHHHHHHHHHH
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGL-GLILHHKPLG--KAFEVRCLHIPVYDRTP----------FEGLVKFVEETVR 233 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~-~~~~~~~~L~--~~~~V~~~D~~G~G~Ss----------~~~~~~dl~~~i~ 233 (468)
+.|...|. +...|++++|.-|+.. .|.+.+..|. ..+.|+++|.||+|.|. +..-+++..++++
T Consensus 33 l~y~~~G~---G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~ 109 (277)
T KOG2984|consen 33 LGYCKYGH---GPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLME 109 (277)
T ss_pred eeeeecCC---CCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHH
Confidence 57888887 4568999999877665 7888887772 24999999999999993 3444555555556
Q ss_pred HHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCCh
Q 012190 234 REHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDP 313 (468)
Q Consensus 234 ~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (468)
. +..+++.++|+|=||..|+..|+++++.|.++|+.+..+-.+......+ ..+.+ ...|.. -...|
T Consensus 110 a----Lk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~----kgiRd-----v~kWs~-r~R~P 175 (277)
T KOG2984|consen 110 A----LKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAF----KGIRD-----VNKWSA-RGRQP 175 (277)
T ss_pred H----hCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHH----hchHH-----Hhhhhh-hhcch
Confidence 5 3456999999999999999999999999999999876553322211110 00000 000000 00111
Q ss_pred hhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHH--hHHHhhhcccCCceEEEEEeCCCC
Q 012190 314 IKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSA--SAYANSRLHAVKAEVLVLASGKDN 391 (468)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~l~~i~~PvLlI~G~~D~ 391 (468)
+. ....++ .+.+.+. .++.....+... ....+-.+.+++||+|++||++|+
T Consensus 176 ~e-------~~Yg~e----~f~~~wa----------------~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp 228 (277)
T KOG2984|consen 176 YE-------DHYGPE----TFRTQWA----------------AWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDP 228 (277)
T ss_pred HH-------HhcCHH----HHHHHHH----------------HHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCC
Confidence 00 000000 0000000 000011111111 011235678999999999999999
Q ss_pred CCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 392 MLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 392 ~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
+++.. ....+....+.+++.++|.++|.+++..+++|+..+. +|++.
T Consensus 229 ~~~~~-hv~fi~~~~~~a~~~~~peGkHn~hLrya~eFnklv~--dFl~~ 275 (277)
T KOG2984|consen 229 FCGDP-HVCFIPVLKSLAKVEIHPEGKHNFHLRYAKEFNKLVL--DFLKS 275 (277)
T ss_pred CCCCC-CccchhhhcccceEEEccCCCcceeeechHHHHHHHH--HHHhc
Confidence 99999 7999999999999999999999999999999999999 77765
No 54
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.79 E-value=1.4e-18 Score=161.15 Aligned_cols=208 Identities=20% Similarity=0.198 Sum_probs=122.5
Q ss_pred eEEEEecCCCCCCCC-----------hHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeC
Q 012190 206 FEVRCLHIPVYDRTP-----------FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSN 274 (468)
Q Consensus 206 ~~V~~~D~~G~G~Ss-----------~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~ 274 (468)
|+|+++|+||+|.|+ .+++++++..+++. .+.++++++||||||.+++.+|+++|++|+++|+++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~----l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~ 76 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREA----LGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLIS 76 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHH----HTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHH----hCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEe
Confidence 789999999999886 46777788888777 445579999999999999999999999999999998
Q ss_pred CCC----CCCCCCcCcchHHHhhCchhH----HhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhh
Q 012190 275 PAT----SFGRSQLQPLFPILKAMPDEL----HCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLS 346 (468)
Q Consensus 275 p~~----~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (468)
++. ......+.. ........... ................... .. .......... ..
T Consensus 77 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-----~~~~~~~~~~-----~~ 140 (230)
T PF00561_consen 77 PPPDLPDGLWNRIWPR-GNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYD-----RE-----FVEDFLKQFQ-----SQ 140 (230)
T ss_dssp ESSHHHHHHHHHCHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HH-----HHHTHHHHHH-----HH
T ss_pred eeccchhhhhHHHHhh-hhhhhhHHHhhhccccccchhhhhhhhhheeecc-----Cc-----cccchhhccc-----hh
Confidence 853 000000000 00000000000 0000000000000000000 00 0000000000 00
Q ss_pred hhhccCCcchhHHHHH--HHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCcccccc
Q 012190 347 VMSDIIPKDTLLWKLK--LLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLE 424 (468)
Q Consensus 347 ~~~~~~~~~~l~~~~~--~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e 424 (468)
................ ............+..+++|+|+++|++|.++|+. ....+.+.+|+.++++++++||+.+++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~-~~~~~~~~~~~~~~~~~~~~GH~~~~~ 219 (230)
T PF00561_consen 141 QYARFAETDAFDNMFWNALGYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPE-SSEQLAKLIPNSQLVLIEGSGHFAFLE 219 (230)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHH-HHHHHHHHSTTEEEEEETTCCSTHHHH
T ss_pred hhhHHHHHHHHhhhccccccccccccccccccccCCCeEEEEeCCCCCCCHH-HHHHHHHhcCCCEEEECCCCChHHHhc
Confidence 0000000000000000 0111111223566789999999999999999999 688899999999999999999999999
Q ss_pred CcHHHHHHHH
Q 012190 425 EGISLLTIIK 434 (468)
Q Consensus 425 ~p~~~~~~I~ 434 (468)
.|+++.+.|.
T Consensus 220 ~~~~~~~~i~ 229 (230)
T PF00561_consen 220 GPDEFNEIII 229 (230)
T ss_dssp SHHHHHHHHH
T ss_pred CHHhhhhhhc
Confidence 9999999886
No 55
>PRK11071 esterase YqiA; Provisional
Probab=99.78 E-value=4.1e-18 Score=153.68 Aligned_cols=180 Identities=19% Similarity=0.204 Sum_probs=118.9
Q ss_pred CeEEEeCCCCCchhhHHH--hHhhhc---CCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHH
Q 012190 180 PTLLFLPGIDGLGLGLIL--HHKPLG---KAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGC 254 (468)
Q Consensus 180 p~lV~lHG~~~s~~~~~~--~~~~L~---~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ 254 (468)
|+|||+||++++...|.. +...++ .+|+|+++|+|||+ ++.++++.+++++ .+.++++++||||||.
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~----~~~~~~l~~l~~~----~~~~~~~lvG~S~Gg~ 73 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP----ADAAELLESLVLE----HGGDPLGLVGSSLGGY 73 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH----HHHHHHHHHHHHH----cCCCCeEEEEECHHHH
Confidence 689999999999999884 334453 37999999999996 5788888888887 4456899999999999
Q ss_pred HHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhh
Q 012190 255 LALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQL 334 (468)
Q Consensus 255 ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (468)
+++.+|.++|. ++|+++|+..+. ..+.. ..+... +....
T Consensus 74 ~a~~~a~~~~~---~~vl~~~~~~~~--------~~~~~---------------~~~~~~--------~~~~~------- 112 (190)
T PRK11071 74 YATWLSQCFML---PAVVVNPAVRPF--------ELLTD---------------YLGENE--------NPYTG------- 112 (190)
T ss_pred HHHHHHHHcCC---CEEEECCCCCHH--------HHHHH---------------hcCCcc--------cccCC-------
Confidence 99999999983 468888854310 00000 000000 00000
Q ss_pred hhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEe
Q 012190 335 SNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNF 414 (468)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i 414 (468)
+.+. +....+ ....... ...+ ..++|+++|+|++|+++|++ .+.++.+ +++.+++
T Consensus 113 -~~~~------------~~~~~~----~d~~~~~---~~~i-~~~~~v~iihg~~De~V~~~-~a~~~~~---~~~~~~~ 167 (190)
T PRK11071 113 -QQYV------------LESRHI----YDLKVMQ---IDPL-ESPDLIWLLQQTGDEVLDYR-QAVAYYA---ACRQTVE 167 (190)
T ss_pred -CcEE------------EcHHHH----HHHHhcC---CccC-CChhhEEEEEeCCCCcCCHH-HHHHHHH---hcceEEE
Confidence 0000 000000 0000000 1122 36788999999999999999 7888887 4577788
Q ss_pred CCCCccccccCcHHHHHHHHh
Q 012190 415 KDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 415 ~~aGH~~~~e~p~~~~~~I~~ 435 (468)
+|++|.. ...++..+.+.+
T Consensus 168 ~ggdH~f--~~~~~~~~~i~~ 186 (190)
T PRK11071 168 EGGNHAF--VGFERYFNQIVD 186 (190)
T ss_pred CCCCcch--hhHHHhHHHHHH
Confidence 9999998 344777777773
No 56
>PRK10566 esterase; Provisional
Probab=99.77 E-value=1.9e-17 Score=156.36 Aligned_cols=107 Identities=19% Similarity=0.208 Sum_probs=78.1
Q ss_pred eecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCC-------hH-------HHHHHHHHHH
Q 012190 168 CPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP-------FE-------GLVKFVEETV 232 (468)
Q Consensus 168 ~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss-------~~-------~~~~dl~~~i 232 (468)
+|.+.+...+..|+||++||++++...|..+++.| .++|.|+++|+||||.+. +. +..+++.+++
T Consensus 16 ~~~p~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (249)
T PRK10566 16 HAFPAGQRDTPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLR 95 (249)
T ss_pred EEcCCCCCCCCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHH
Confidence 34444332234689999999999998899999999 568999999999998751 11 2245555566
Q ss_pred HHHhhc--CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeC
Q 012190 233 RREHAS--SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSN 274 (468)
Q Consensus 233 ~~~~~~--~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~ 274 (468)
+.+... ...++++++||||||.+++.+++++|+...++++++
T Consensus 96 ~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~ 139 (249)
T PRK10566 96 AAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMG 139 (249)
T ss_pred HHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeC
Confidence 655433 235689999999999999999999987554555443
No 57
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.77 E-value=2.3e-17 Score=163.80 Aligned_cols=102 Identities=20% Similarity=0.207 Sum_probs=84.6
Q ss_pred CCeEEEeCCCCCchhhH-----HHhHhhh-cCCeEEEEecCCCCCCC----ChHHHHH-HHHHHHHHHhhcCCCCcEEEE
Q 012190 179 SPTLLFLPGIDGLGLGL-----ILHHKPL-GKAFEVRCLHIPVYDRT----PFEGLVK-FVEETVRREHASSPEKPIYLV 247 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~-----~~~~~~L-~~~~~V~~~D~~G~G~S----s~~~~~~-dl~~~i~~~~~~~~~~~i~Lv 247 (468)
+++||++||+..+...+ ..+++.| .++|+|+++|++|+|.+ ++++++. ++.++++.+....+.++++++
T Consensus 62 ~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~~~~d~~~~~~~~~v~~l~~~~~~~~i~lv 141 (350)
T TIGR01836 62 KTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYLTLDDYINGYIDKCVDYICRTSKLDQISLL 141 (350)
T ss_pred CCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcCCHHHHHHHHHHHHHHHHHHHhCCCcccEE
Confidence 55799999986655544 5688888 66899999999999976 4677764 477777777766677899999
Q ss_pred EeChhHHHHHHHHHhCCCCceEEEEeCCCCCCC
Q 012190 248 GDSFGGCLALAVAARNPTIDLILILSNPATSFG 280 (468)
Q Consensus 248 GhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~ 280 (468)
||||||.+++.+++.+|++++++|+++++..+.
T Consensus 142 GhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~ 174 (350)
T TIGR01836 142 GICQGGTFSLCYAALYPDKIKNLVTMVTPVDFE 174 (350)
T ss_pred EECHHHHHHHHHHHhCchheeeEEEeccccccC
Confidence 999999999999999999999999999887654
No 58
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.76 E-value=1.9e-17 Score=142.54 Aligned_cols=143 Identities=24% Similarity=0.340 Sum_probs=113.8
Q ss_pred eEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHH
Q 012190 181 TLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAV 259 (468)
Q Consensus 181 ~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~ 259 (468)
+||++||++++...|..+.+.| .++|.|+++|+|++|.+...+.++++.+.+.... ....+++++|||+||.+++.+
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~ 78 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGADAVERVLADIRAGY--PDPDRIILIGHSMGGAIAANL 78 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHSHHHHHHHHHHHHHH--CTCCEEEEEEETHHHHHHHHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchhHHHHHHHHHHHhhc--CCCCcEEEEEEccCcHHHHHH
Confidence 5899999999999999999999 6789999999999999954444444444432212 245799999999999999999
Q ss_pred HHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcc
Q 012190 260 AARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLP 339 (468)
Q Consensus 260 a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (468)
+.++ ..++++|+++|.. .
T Consensus 79 ~~~~-~~v~~~v~~~~~~------------------~------------------------------------------- 96 (145)
T PF12695_consen 79 AARN-PRVKAVVLLSPYP------------------D------------------------------------------- 96 (145)
T ss_dssp HHHS-TTESEEEEESESS------------------G-------------------------------------------
T ss_pred hhhc-cceeEEEEecCcc------------------c-------------------------------------------
Confidence 9998 7899999998710 0
Q ss_pred hhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC-CcEEEEeCCCC
Q 012190 340 ALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ-NCIVRNFKDNG 418 (468)
Q Consensus 340 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~-~~~~~~i~~aG 418 (468)
.+.+...++|+++++|++|..++++ ..+.+.+.++ +.+++++++++
T Consensus 97 --------------------------------~~~~~~~~~pv~~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~i~g~~ 143 (145)
T PF12695_consen 97 --------------------------------SEDLAKIRIPVLFIHGENDPLVPPE-QVRRLYEALPGPKELYIIPGAG 143 (145)
T ss_dssp --------------------------------CHHHTTTTSEEEEEEETT-SSSHHH-HHHHHHHHHCSSEEEEEETTS-
T ss_pred --------------------------------hhhhhccCCcEEEEEECCCCcCCHH-HHHHHHHHcCCCcEEEEeCCCc
Confidence 0122456679999999999999998 7889888887 68999999999
Q ss_pred cc
Q 012190 419 HT 420 (468)
Q Consensus 419 H~ 420 (468)
|+
T Consensus 144 H~ 145 (145)
T PF12695_consen 144 HF 145 (145)
T ss_dssp TT
T ss_pred Cc
Confidence 96
No 59
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.75 E-value=7.5e-17 Score=165.18 Aligned_cols=251 Identities=18% Similarity=0.093 Sum_probs=149.8
Q ss_pred ceeeeecCCCCCCCCCCeEEEeCCCCCchhhHH-----HhHhhh-cCCeEEEEecCCCCCCC----ChHHHHH-HHHHHH
Q 012190 164 PRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLI-----LHHKPL-GKAFEVRCLHIPVYDRT----PFEGLVK-FVEETV 232 (468)
Q Consensus 164 ~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~-----~~~~~L-~~~~~V~~~D~~G~G~S----s~~~~~~-dl~~~i 232 (468)
...++|.+... ...+++||++||+......|. .+++.| .++|+|+++|++|+|.+ ++++++. .+.+.+
T Consensus 174 ~eLi~Y~P~t~-~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al 252 (532)
T TIGR01838 174 FQLIQYEPTTE-TVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAAL 252 (532)
T ss_pred EEEEEeCCCCC-cCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHH
Confidence 45677765543 124678999999988887775 688888 67899999999999977 3566664 467777
Q ss_pred HHHhhcCCCCcEEEEEeChhHHHHH----HHHHhC-CCCceEEEEeCCCCCCCCCCcCcch---H---HHhhCchh---H
Q 012190 233 RREHASSPEKPIYLVGDSFGGCLAL----AVAARN-PTIDLILILSNPATSFGRSQLQPLF---P---ILKAMPDE---L 298 (468)
Q Consensus 233 ~~~~~~~~~~~i~LvGhS~GG~ia~----~~a~~~-P~~v~~lVli~p~~~~~~~~~~~~~---~---~~~~~~~~---~ 298 (468)
+.+....+.++++++||||||.++. .+++.+ |++|++++++++...+......... . .++..... +
T Consensus 253 ~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~l 332 (532)
T TIGR01838 253 EVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYL 332 (532)
T ss_pred HHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCC
Confidence 7766556778999999999999852 345665 7899999999988776543211100 0 00000000 0
Q ss_pred -HhhHHHHhhhhcCChhhHH--HHhhccCCChhH-HhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHH----
Q 012190 299 -HCAVPYLLSYVMGDPIKMA--MVNIENRLPPRI-KLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAY---- 370 (468)
Q Consensus 299 -~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---- 370 (468)
...+...+..+..+.+.+. ...+.....+.. ....+.. -...++.....+.++.+.....-
T Consensus 333 pg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~-----------D~t~lP~~~~~~~lr~ly~~N~L~~G~ 401 (532)
T TIGR01838 333 DGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNS-----------DSTNLPGKMHNFYLRNLYLQNALTTGG 401 (532)
T ss_pred CHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhc-----------cCccchHHHHHHHHHHHHhcCCCcCCe
Confidence 0000111111111111100 000000000000 0000000 00012222222222222111110
Q ss_pred -----HhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcH
Q 012190 371 -----ANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGI 427 (468)
Q Consensus 371 -----~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~ 427 (468)
....+..+++|+|+|+|++|.++|++ .++.+.+.+++.+..+++++||.+++++|.
T Consensus 402 ~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~-sa~~l~~~i~~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 402 LEVCGVRLDLSKVKVPVYIIATREDHIAPWQ-SAYRGAALLGGPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred eEECCEecchhhCCCCEEEEeeCCCCcCCHH-HHHHHHHHCCCCEEEEECCCCCchHhhCCC
Confidence 12567889999999999999999999 689999999999999999999999999886
No 60
>PLN02872 triacylglycerol lipase
Probab=99.73 E-value=5.4e-17 Score=161.82 Aligned_cols=274 Identities=14% Similarity=0.129 Sum_probs=153.5
Q ss_pred HhccCccCCCCCCceeeeecCCCC--CCCCCCeEEEeCCCCCchhhHH------HhHhhh-cCCeEEEEecCCCCCCC--
Q 012190 151 DAAKEIIKPDGGPPRWFCPVDCGR--PLKGSPTLLFLPGIDGLGLGLI------LHHKPL-GKAFEVRCLHIPVYDRT-- 219 (468)
Q Consensus 151 ~~~~~~~~~dg~~~~~~~y~~~g~--~~~~~p~lV~lHG~~~s~~~~~------~~~~~L-~~~~~V~~~D~~G~G~S-- 219 (468)
.+...+.+.||..+...+....+. ...++|+|+|+||+++++..|. .+...| .++|+|+++|+||++.|
T Consensus 44 ~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~g 123 (395)
T PLN02872 44 CTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYG 123 (395)
T ss_pred ceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccC
Confidence 344567788998765444321111 1124688999999999988874 233456 56899999999998643
Q ss_pred --------------ChHHHH-HHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCC---CceEEEEeCCCCCCCC
Q 012190 220 --------------PFEGLV-KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPT---IDLILILSNPATSFGR 281 (468)
Q Consensus 220 --------------s~~~~~-~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~---~v~~lVli~p~~~~~~ 281 (468)
++++++ .|+.++++++... ..++++++||||||.+++.++ .+|+ +|+.+++++|......
T Consensus 124 h~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~-~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~~~~~ 201 (395)
T PLN02872 124 HVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSI-TNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPISYLDH 201 (395)
T ss_pred CCCCCccchhccCCcHHHHHHHHHHHHHHHHHhc-cCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchhhhcc
Confidence 356777 7999999987643 246899999999999998544 6776 6888899998764322
Q ss_pred CCcCcchHHHhh-CchhHH------------hhHHHHhhhhcCChh-hHHHHhhccCCChhHHhhhhhhhcchhcchhhh
Q 012190 282 SQLQPLFPILKA-MPDELH------------CAVPYLLSYVMGDPI-KMAMVNIENRLPPRIKLEQLSNNLPALLPRLSV 347 (468)
Q Consensus 282 ~~~~~~~~~~~~-~~~~~~------------~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (468)
.. ..+...+.. ....+. ..+..+...+..... .........+.+. ..... .++.
T Consensus 202 ~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~-~~n~~----------~~~~ 269 (395)
T PLN02872 202 VT-APLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNC-CFNAS----------RIDY 269 (395)
T ss_pred CC-CHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCc-ccchh----------hhhH
Confidence 11 111100000 000000 000000000000000 0000000000000 00000 0000
Q ss_pred hhccCCcch----hHHHHHHHH-------------HHhHH-----HhhhcccC--CceEEEEEeCCCCCCCcHHHHHHHH
Q 012190 348 MSDIIPKDT----LLWKLKLLK-------------SASAY-----ANSRLHAV--KAEVLVLASGKDNMLPSEDEAKRLN 403 (468)
Q Consensus 348 ~~~~~~~~~----l~~~~~~~~-------------~~~~~-----~~~~l~~i--~~PvLlI~G~~D~~v~~~~~~~~l~ 403 (468)
+....+..+ +......+. ....+ ....+.++ ++|+++++|++|.+++++ ..+.+.
T Consensus 270 ~~~~~pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~-dv~~l~ 348 (395)
T PLN02872 270 YLEYEPHPSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVT-DVEHTL 348 (395)
T ss_pred HHhcCCCcchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHH-HHHHHH
Confidence 001011111 000011110 00000 01345666 589999999999999999 699999
Q ss_pred HhCCC-cEEEEeCCCCcc---ccccCcHHHHHHHHhcCcccc
Q 012190 404 NSLQN-CIVRNFKDNGHT---LLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 404 ~~l~~-~~~~~i~~aGH~---~~~e~p~~~~~~I~~~~F~~r 441 (468)
+.+++ .+++.++++||. ...|.|+++.+.|. +|+++
T Consensus 349 ~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il--~fL~~ 388 (395)
T PLN02872 349 AELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMI--QFFRS 388 (395)
T ss_pred HHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHH--HHHHH
Confidence 99987 688899999996 44588999999998 56553
No 61
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.72 E-value=2.9e-16 Score=146.89 Aligned_cols=247 Identities=21% Similarity=0.215 Sum_probs=140.9
Q ss_pred eeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhcC---CeEEEEecCCCCCCCC-----hHHHHHHHHHHHHHHhhc
Q 012190 167 FCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLGK---AFEVRCLHIPVYDRTP-----FEGLVKFVEETVRREHAS 238 (468)
Q Consensus 167 ~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~~---~~~V~~~D~~G~G~Ss-----~~~~~~dl~~~i~~~~~~ 238 (468)
+.|...+.. +|+++++||++++...|......+.. .|+++.+|+||||.|+ ...+++++..+++++
T Consensus 12 ~~~~~~~~~---~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~--- 85 (282)
T COG0596 12 LAYREAGGG---GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSDPAGYSLSAYADDLAALLDAL--- 85 (282)
T ss_pred EEEeecCCC---CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCCcccccHHHHHHHHHHHHHHh---
Confidence 445544442 55899999999999999884333321 2999999999999994 445578888888874
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCc-------chHHHhhCchhH-HhhHHHHhhhhc
Q 012190 239 SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQP-------LFPILKAMPDEL-HCAVPYLLSYVM 310 (468)
Q Consensus 239 ~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~ 310 (468)
...+++++||||||.+++.++.++|+.+.++|++++........... ............ ............
T Consensus 86 -~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (282)
T COG0596 86 -GLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAALG 164 (282)
T ss_pred -CCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhhhhccc
Confidence 33469999999999999999999999999999999865411110000 000000000000 000000000000
Q ss_pred -CChhhHHHH-hhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeC
Q 012190 311 -GDPIKMAMV-NIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASG 388 (468)
Q Consensus 311 -~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~ 388 (468)
......... ...... ......... ..................... .....+..+++|+++++|+
T Consensus 165 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~l~i~g~ 230 (282)
T COG0596 165 LLAALAAAARAGLAEAL-----RAPLLGAAA-------AAFARAARADLAAALLALLDR--DLRAALARITVPTLIIHGE 230 (282)
T ss_pred ccccccccchhcccccc-----ccccchhHh-------hhhhhhcccccchhhhccccc--ccchhhccCCCCeEEEecC
Confidence 000000000 000000 000000000 000000000000000000000 1123457788999999999
Q ss_pred CCCCCCcHHHHHHHHHhCCC-cEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 389 KDNMLPSEDEAKRLNNSLQN-CIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 389 ~D~~v~~~~~~~~l~~~l~~-~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
+|.+.+.. ....+.+.+++ +++++++++||+.++++|+.+.+.+.+
T Consensus 231 ~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~ 277 (282)
T COG0596 231 DDPVVPAE-LARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLA 277 (282)
T ss_pred CCCcCCHH-HHHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHH
Confidence 99666666 46777778885 899999999999999999999988883
No 62
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.66 E-value=1.7e-15 Score=137.24 Aligned_cols=179 Identities=19% Similarity=0.189 Sum_probs=133.0
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhhcC--CeEEEEecCCCCCCCC----hHHHHHHHHHHHHHHhhcC-CCCcEEEEEeCh
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPLGK--AFEVRCLHIPVYDRTP----FEGLVKFVEETVRREHASS-PEKPIYLVGDSF 251 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~--~~~V~~~D~~G~G~Ss----~~~~~~dl~~~i~~~~~~~-~~~~i~LvGhS~ 251 (468)
.++++++||..........+...|+. +++|+++|+.|+|.|+ -....+|+.++.+.++... +.++|+|+|+|+
T Consensus 60 ~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y~Di~avye~Lr~~~g~~~~Iil~G~Si 139 (258)
T KOG1552|consen 60 HPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLYADIKAVYEWLRNRYGSPERIILYGQSI 139 (258)
T ss_pred ceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccccchhhHHHHHHHHHhhcCCCceEEEEEecC
Confidence 58999999997666666666667755 7999999999999983 3467788888888888777 478999999999
Q ss_pred hHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHh
Q 012190 252 GGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKL 331 (468)
Q Consensus 252 GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (468)
|+..++.+|++.| +.++||.+|..+.. +.+-. .. ..
T Consensus 140 Gt~~tv~Lasr~~--~~alVL~SPf~S~~-----------rv~~~---------------~~----------------~~ 175 (258)
T KOG1552|consen 140 GTVPTVDLASRYP--LAAVVLHSPFTSGM-----------RVAFP---------------DT----------------KT 175 (258)
T ss_pred CchhhhhHhhcCC--cceEEEeccchhhh-----------hhhcc---------------Cc----------------ce
Confidence 9999999999998 99999998844221 00000 00 00
Q ss_pred hhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCc-E
Q 012190 332 EQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNC-I 410 (468)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~-~ 410 (468)
..+.+. +.. .+....++||+|++||+.|.+++.. ....+.+..+++ +
T Consensus 176 ~~~~d~--------------f~~-----------------i~kI~~i~~PVLiiHgtdDevv~~s-Hg~~Lye~~k~~~e 223 (258)
T KOG1552|consen 176 TYCFDA--------------FPN-----------------IEKISKITCPVLIIHGTDDEVVDFS-HGKALYERCKEKVE 223 (258)
T ss_pred EEeecc--------------ccc-----------------cCcceeccCCEEEEecccCceeccc-ccHHHHHhccccCC
Confidence 000000 000 2456889999999999999999999 899999999865 8
Q ss_pred EEEeCCCCccccccCcHHHHHHHH
Q 012190 411 VRNFKDNGHTLLLEEGISLLTIIK 434 (468)
Q Consensus 411 ~~~i~~aGH~~~~e~p~~~~~~I~ 434 (468)
-.++.|+||.-..-.|+ +...++
T Consensus 224 pl~v~g~gH~~~~~~~~-yi~~l~ 246 (258)
T KOG1552|consen 224 PLWVKGAGHNDIELYPE-YIEHLR 246 (258)
T ss_pred CcEEecCCCcccccCHH-HHHHHH
Confidence 88899999997654444 444444
No 63
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.62 E-value=6.4e-15 Score=138.95 Aligned_cols=98 Identities=18% Similarity=0.188 Sum_probs=83.3
Q ss_pred CCeEEEeCCCCCc----hhhHHHhHhhh-cCCeEEEEecCCCCCCC-------ChHHHHHHHHHHHHHHhhcCCCCcEEE
Q 012190 179 SPTLLFLPGIDGL----GLGLILHHKPL-GKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASSPEKPIYL 246 (468)
Q Consensus 179 ~p~lV~lHG~~~s----~~~~~~~~~~L-~~~~~V~~~D~~G~G~S-------s~~~~~~dl~~~i~~~~~~~~~~~i~L 246 (468)
.|+|||+||+++. ...|..+++.| ..+|.|+++|+||||.| +++++++|+..+++.+... +.++++|
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~-~~~~v~L 103 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQ-GHPPVTL 103 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhc-CCCCEEE
Confidence 5789999999864 34567788888 57899999999999988 3677888888887776543 4579999
Q ss_pred EEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 247 VGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 247 vGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
+||||||.+++.+|.++|+.++++|+++|..
T Consensus 104 vG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~ 134 (266)
T TIGR03101 104 WGLRLGALLALDAANPLAAKCNRLVLWQPVV 134 (266)
T ss_pred EEECHHHHHHHHHHHhCccccceEEEecccc
Confidence 9999999999999999999999999999865
No 64
>PRK11460 putative hydrolase; Provisional
Probab=99.62 E-value=2.3e-14 Score=133.70 Aligned_cols=164 Identities=16% Similarity=0.166 Sum_probs=113.3
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcC-CeEEEEecCCCCC-------CC-------C-------hHHHHHHHHHHHHHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGK-AFEVRCLHIPVYD-------RT-------P-------FEGLVKFVEETVRRE 235 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~-~~~V~~~D~~G~G-------~S-------s-------~~~~~~dl~~~i~~~ 235 (468)
..|+||++||++++...|..+.+.|.+ .+.+..++.+|.. .+ + +.+..+.+.++++.+
T Consensus 15 ~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 94 (232)
T PRK11460 15 AQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRYW 94 (232)
T ss_pred CCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHHH
Confidence 478999999999999999999999953 3344444444431 10 0 122333344444444
Q ss_pred hhcC--CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCCh
Q 012190 236 HASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDP 313 (468)
Q Consensus 236 ~~~~--~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (468)
.... ..++|+|+|||+||.+++.++.++|+.+.++|++++... ..+
T Consensus 95 ~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~--------------~~~------------------ 142 (232)
T PRK11460 95 QQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA--------------SLP------------------ 142 (232)
T ss_pred HHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc--------------ccc------------------
Confidence 3332 346899999999999999999999988888877654110 000
Q ss_pred hhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCC
Q 012190 314 IKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNML 393 (468)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v 393 (468)
.....++|++++||++|+++
T Consensus 143 ------------------------------------------------------------~~~~~~~pvli~hG~~D~vv 162 (232)
T PRK11460 143 ------------------------------------------------------------ETAPTATTIHLIHGGEDPVI 162 (232)
T ss_pred ------------------------------------------------------------ccccCCCcEEEEecCCCCcc
Confidence 00123679999999999999
Q ss_pred CcHHHHHHHHHhCC----CcEEEEeCCCCccccccCcHHHHHHHH
Q 012190 394 PSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (468)
Q Consensus 394 ~~~~~~~~l~~~l~----~~~~~~i~~aGH~~~~e~p~~~~~~I~ 434 (468)
|.+ ..+.+.+.+. +++++.++++||.+..+.-+...+.|.
T Consensus 163 p~~-~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~ 206 (232)
T PRK11460 163 DVA-HAVAAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLR 206 (232)
T ss_pred CHH-HHHHHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHH
Confidence 999 6888877664 568888999999997655555555554
No 65
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.61 E-value=2.6e-14 Score=133.78 Aligned_cols=247 Identities=16% Similarity=0.210 Sum_probs=135.4
Q ss_pred cCccCCCCCC--ceeeeecCCCCCCCCCCeEEEeCCCCCchh--hHHHhHhhh-cCCeEEEEecCCCCCCCC-------h
Q 012190 154 KEIIKPDGGP--PRWFCPVDCGRPLKGSPTLLFLPGIDGLGL--GLILHHKPL-GKAFEVRCLHIPVYDRTP-------F 221 (468)
Q Consensus 154 ~~~~~~dg~~--~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~--~~~~~~~~L-~~~~~V~~~D~~G~G~Ss-------~ 221 (468)
+.+..+||+- ..|..... ....|.||++||+.|+.. ..+.+...+ .++|.|+++|+|||+++. -
T Consensus 52 e~v~~pdg~~~~ldw~~~p~----~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh 127 (345)
T COG0429 52 ERLETPDGGFIDLDWSEDPR----AAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYH 127 (345)
T ss_pred EEEEcCCCCEEEEeeccCcc----ccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceec
Confidence 4566777765 34444311 234789999999977765 344566777 778999999999999872 2
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCC--CceEEEEeCCCCCCCCCCcCcchHHHhhCchhHH
Q 012190 222 EGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPT--IDLILILSNPATSFGRSQLQPLFPILKAMPDELH 299 (468)
Q Consensus 222 ~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~--~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~ 299 (468)
..+.+|+..+++.+....+..|+..+|.|+||.+.+.+..+..+ .+.+.+.++.+..+. .....+.....
T Consensus 128 ~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~--------~~~~~l~~~~s 199 (345)
T COG0429 128 SGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLE--------ACAYRLDSGFS 199 (345)
T ss_pred ccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHH--------HHHHHhcCchh
Confidence 34458888888888887889999999999999544444443222 244445444333220 00000000000
Q ss_pred hhHHHHhhhhcCChhhHHHHh----hccCCChhHHhhhhhhhcchhcchhhhhhccCC--cchhHHHHHHHHHHhHHHhh
Q 012190 300 CAVPYLLSYVMGDPIKMAMVN----IENRLPPRIKLEQLSNNLPALLPRLSVMSDIIP--KDTLLWKLKLLKSASAYANS 373 (468)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~ 373 (468)
..++.....+.+...... .....+.. ..+..+.... +.+....+. .-.+....+.++.... ..
T Consensus 200 ---~~ly~r~l~~~L~~~~~~kl~~l~~~~p~~--~~~~ik~~~t----i~eFD~~~Tap~~Gf~da~dYYr~aSs--~~ 268 (345)
T COG0429 200 ---LRLYSRYLLRNLKRNAARKLKELEPSLPGT--VLAAIKRCRT----IREFDDLLTAPLHGFADAEDYYRQASS--LP 268 (345)
T ss_pred ---hhhhHHHHHHHHHHHHHHHHHhcCcccCcH--HHHHHHhhch----HHhccceeeecccCCCcHHHHHHhccc--cc
Confidence 011111111110000000 00001100 0011111110 011111111 1111122222222211 35
Q ss_pred hcccCCceEEEEEeCCCCCCCcHHHHHHHHH-hCCCcEEEEeCCCCcccccc
Q 012190 374 RLHAVKAEVLVLASGKDNMLPSEDEAKRLNN-SLQNCIVRNFKDNGHTLLLE 424 (468)
Q Consensus 374 ~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~-~l~~~~~~~i~~aGH~~~~e 424 (468)
.+.+|.+|+|+|++.+|++++++ ....... ..|+..+..-+.+||..++.
T Consensus 269 ~L~~Ir~PtLii~A~DDP~~~~~-~iP~~~~~~np~v~l~~t~~GGHvGfl~ 319 (345)
T COG0429 269 LLPKIRKPTLIINAKDDPFMPPE-VIPKLQEMLNPNVLLQLTEHGGHVGFLG 319 (345)
T ss_pred cccccccceEEEecCCCCCCChh-hCCcchhcCCCceEEEeecCCceEEecc
Confidence 77899999999999999999997 4555555 66788999999999999988
No 66
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.61 E-value=4.5e-14 Score=158.01 Aligned_cols=266 Identities=14% Similarity=0.085 Sum_probs=140.3
Q ss_pred ceeeeecCCCCC---CCCCCeEEEeCCCCCchhhHHHh-----Hhhh-cCCeEEEEecCCCCCC------CChHHHHHHH
Q 012190 164 PRWFCPVDCGRP---LKGSPTLLFLPGIDGLGLGLILH-----HKPL-GKAFEVRCLHIPVYDR------TPFEGLVKFV 228 (468)
Q Consensus 164 ~~~~~y~~~g~~---~~~~p~lV~lHG~~~s~~~~~~~-----~~~L-~~~~~V~~~D~~G~G~------Ss~~~~~~dl 228 (468)
.+.++|.+...+ ...+|+|||+||++.+...|... ++.| ..+|+|+++|+...+. .++.+++..+
T Consensus 49 ~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~G~~~~~~~~~~~~l~~~i~~l 128 (994)
T PRK07868 49 YRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDFGSPDKVEGGMERNLADHVVAL 128 (994)
T ss_pred EEEEEeCCCCccccccCCCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcCCCCChhHcCccCCHHHHHHHH
Confidence 355677544321 13568999999999999999875 7888 6689999999622111 1344555555
Q ss_pred HHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhC-CCCceEEEEeCCCCCCCCCCcCcch-HH----HhhCchhHH--h
Q 012190 229 EETVRREHASSPEKPIYLVGDSFGGCLALAVAARN-PTIDLILILSNPATSFGRSQLQPLF-PI----LKAMPDELH--C 300 (468)
Q Consensus 229 ~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~-P~~v~~lVli~p~~~~~~~~~~~~~-~~----~~~~~~~~~--~ 300 (468)
.+.++.+... ..++++|+||||||.+++.+|+.+ |++|+++|+++++..+......... .. .......+. .
T Consensus 129 ~~~l~~v~~~-~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (994)
T PRK07868 129 SEAIDTVKDV-TGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHVFNRL 207 (994)
T ss_pred HHHHHHHHHh-hCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhhhhcC
Confidence 5555543322 235899999999999999998855 5689999998887654322110000 00 000000000 0
Q ss_pred hHHHH---hhhhcCChhhHHH--HhhccCCChhHH--hhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHH---
Q 012190 301 AVPYL---LSYVMGDPIKMAM--VNIENRLPPRIK--LEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAY--- 370 (468)
Q Consensus 301 ~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--- 370 (468)
.++.+ ..+..-++..... ............ .++..+.+.....+. ..+..........+......
T Consensus 208 ~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~-----~~~g~~~~~~~~~~~~~n~~~~g 282 (994)
T PRK07868 208 DIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWI-----AWSGPAISELLKQFIAHNRMMTG 282 (994)
T ss_pred CCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhcc-----ccchHHHHHHHHHHHHhCcccCc
Confidence 00000 0011111111000 000000000000 000000000000000 01111111111111110000
Q ss_pred ---H---hhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEE-EEeCCCCcccccc---CcHHHHHHHHhc
Q 012190 371 ---A---NSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIV-RNFKDNGHTLLLE---EGISLLTIIKGT 436 (468)
Q Consensus 371 ---~---~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~-~~i~~aGH~~~~e---~p~~~~~~I~~~ 436 (468)
. ...+.++++|+|+|+|++|.++|++ ..+.+.+.++++++ .+++++||+.++- .++++-..|.+|
T Consensus 283 ~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~-~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~w 357 (994)
T PRK07868 283 GFAINGQMVTLADITCPVLAFVGEVDDIGQPA-SVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADW 357 (994)
T ss_pred eEEECCEEcchhhCCCCEEEEEeCCCCCCCHH-HHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHH
Confidence 0 0247899999999999999999999 79999999999987 6789999997664 455555555544
No 67
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.59 E-value=4.1e-15 Score=129.70 Aligned_cols=195 Identities=19% Similarity=0.203 Sum_probs=135.9
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh--cCCeEEEEecCCCCCCCC----hHHHHHHHHHHHHHHhhc--CCCCcEEEEEe
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL--GKAFEVRCLHIPVYDRTP----FEGLVKFVEETVRREHAS--SPEKPIYLVGD 249 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L--~~~~~V~~~D~~G~G~Ss----~~~~~~dl~~~i~~~~~~--~~~~~i~LvGh 249 (468)
+.|+++++||..|+-....+.+.-+ .-+.+|+.+++||+|.|+ -+.+.-|-+.+++++..+ +...+++|+|.
T Consensus 77 S~pTlLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~GL~lDs~avldyl~t~~~~dktkivlfGr 156 (300)
T KOG4391|consen 77 SRPTLLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGR 156 (300)
T ss_pred CCceEEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccccceeccHHHHHHHHhcCccCCcceEEEEec
Confidence 4889999999999988887777666 557899999999999983 345555666667666543 34678999999
Q ss_pred ChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhH
Q 012190 250 SFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRI 329 (468)
Q Consensus 250 S~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (468)
|+||++|+.+|+++.+++.++|+-+...+.+.....-..++. ...++.+
T Consensus 157 SlGGAvai~lask~~~ri~~~ivENTF~SIp~~~i~~v~p~~-------~k~i~~l------------------------ 205 (300)
T KOG4391|consen 157 SLGGAVAIHLASKNSDRISAIIVENTFLSIPHMAIPLVFPFP-------MKYIPLL------------------------ 205 (300)
T ss_pred ccCCeeEEEeeccchhheeeeeeechhccchhhhhheeccch-------hhHHHHH------------------------
Confidence 999999999999999999999998876544322111110000 0000000
Q ss_pred HhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC--
Q 012190 330 KLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ-- 407 (468)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~-- 407 (468)
. .+.... ....+..-++|.|+|.|.+|+++||. ..+.+.+.+|
T Consensus 206 -----c-------------------------~kn~~~----S~~ki~~~~~P~LFiSGlkDelVPP~-~Mr~Ly~~c~S~ 250 (300)
T KOG4391|consen 206 -----C-------------------------YKNKWL----SYRKIGQCRMPFLFISGLKDELVPPV-MMRQLYELCPSR 250 (300)
T ss_pred -----H-------------------------HHhhhc----chhhhccccCceEEeecCccccCCcH-HHHHHHHhCchh
Confidence 0 000000 01233566899999999999999999 7999999998
Q ss_pred CcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 408 NCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 408 ~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
.+++..||++.|.-.+- .+..-++|. +|+..
T Consensus 251 ~Krl~eFP~gtHNDT~i-~dGYfq~i~--dFlaE 281 (300)
T KOG4391|consen 251 TKRLAEFPDGTHNDTWI-CDGYFQAIE--DFLAE 281 (300)
T ss_pred hhhheeCCCCccCceEE-eccHHHHHH--HHHHH
Confidence 67899999999985442 233444555 44444
No 68
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.58 E-value=6.6e-14 Score=133.29 Aligned_cols=257 Identities=18% Similarity=0.169 Sum_probs=164.3
Q ss_pred ceeeeecCCCCCCC-CCCeEEEeCCCCCchhhH-----------HHhH---hhh-cCCeEEEEecCCCCC-CC-------
Q 012190 164 PRWFCPVDCGRPLK-GSPTLLFLPGIDGLGLGL-----------ILHH---KPL-GKAFEVRCLHIPVYD-RT------- 219 (468)
Q Consensus 164 ~~~~~y~~~g~~~~-~~p~lV~lHG~~~s~~~~-----------~~~~---~~L-~~~~~V~~~D~~G~G-~S------- 219 (468)
..|+.|...|.... ....|+++||+.++.... ..++ +.+ ...|.|+|.+-.|.+ .|
T Consensus 35 ~~~vay~T~Gtln~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~ 114 (368)
T COG2021 35 DARVAYETYGTLNAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSIN 114 (368)
T ss_pred CcEEEEEecccccccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcC
Confidence 35788888887532 356899999999965532 2222 334 457999999998865 33
Q ss_pred -------------ChHHHHHHHHHHHHHHhhcCCCCcEE-EEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCc-
Q 012190 220 -------------PFEGLVKFVEETVRREHASSPEKPIY-LVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQL- 284 (468)
Q Consensus 220 -------------s~~~~~~dl~~~i~~~~~~~~~~~i~-LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~- 284 (468)
++.|+++.-..+++++ +.+++. +||-||||+.|+.++..||++|..+|.++..........
T Consensus 115 p~g~~yg~~FP~~ti~D~V~aq~~ll~~L----GI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia 190 (368)
T COG2021 115 PGGKPYGSDFPVITIRDMVRAQRLLLDAL----GIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIA 190 (368)
T ss_pred CCCCccccCCCcccHHHHHHHHHHHHHhc----CcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHH
Confidence 3668887777777874 444665 899999999999999999999999999987553221110
Q ss_pred -Ccch-HHHhhCchhH------------HhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhh--------------
Q 012190 285 -QPLF-PILKAMPDEL------------HCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSN-------------- 336 (468)
Q Consensus 285 -~~~~-~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 336 (468)
.... +....-|.+- ...+...+..+ ...++.++.+++.+
T Consensus 191 ~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~l-------------tYrS~~~~~~rF~r~~~~~~~~~~~~~f 257 (368)
T COG2021 191 FNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHL-------------TYRSEEELDERFGRRLQADPLRGGGVRF 257 (368)
T ss_pred HHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHH-------------HccCHHHHHHHhcccccccccCCCchhH
Confidence 0000 1111111110 00011111111 11111111222222
Q ss_pred hcchhc-chhhhhhccCCcchhHHHHHHHHHHhHH-----HhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcE
Q 012190 337 NLPALL-PRLSVMSDIIPKDTLLWKLKLLKSASAY-----ANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCI 410 (468)
Q Consensus 337 ~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~ 410 (468)
...+++ .........+..+.+.+..+.+...+.. +...|.++++|+|++.-+.|.+.|++ +.+.+.+.++.+.
T Consensus 258 ~vESYL~~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~-~~~~~~~~L~~~~ 336 (368)
T COG2021 258 AVESYLDYQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPE-LQRALAEALPAAG 336 (368)
T ss_pred HHHHHHHHHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHH-HHHHHHHhccccC
Confidence 111111 1123444556777777777776654432 34568899999999999999999999 7999999998776
Q ss_pred -EEEeC-CCCccccccCcHHHHHHHHhcCccc
Q 012190 411 -VRNFK-DNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 411 -~~~i~-~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
+++++ ..||..++...+.+...|. .|++
T Consensus 337 ~~~~i~S~~GHDaFL~e~~~~~~~i~--~fL~ 366 (368)
T COG2021 337 ALREIDSPYGHDAFLVESEAVGPLIR--KFLA 366 (368)
T ss_pred ceEEecCCCCchhhhcchhhhhHHHH--HHhh
Confidence 65554 6899999999999988888 5554
No 69
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.57 E-value=5.2e-14 Score=136.57 Aligned_cols=252 Identities=20% Similarity=0.258 Sum_probs=142.0
Q ss_pred cCccCCCCCC--ceeeeecCC-C-CCCCCCCeEEEeCCCCCchh-hH-HHhHhhh-cCCeEEEEecCCCCCCCC------
Q 012190 154 KEIIKPDGGP--PRWFCPVDC-G-RPLKGSPTLLFLPGIDGLGL-GL-ILHHKPL-GKAFEVRCLHIPVYDRTP------ 220 (468)
Q Consensus 154 ~~~~~~dg~~--~~~~~y~~~-g-~~~~~~p~lV~lHG~~~s~~-~~-~~~~~~L-~~~~~V~~~D~~G~G~Ss------ 220 (468)
+.+..+||+. ..|+..... . ......|.+|++||+.+++. .| +.++... .+||+|++++.||+|++.
T Consensus 96 eii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~ 175 (409)
T KOG1838|consen 96 EIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRL 175 (409)
T ss_pred EEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCce
Confidence 4456788876 346533221 1 11235799999999976665 33 3444444 778999999999999884
Q ss_pred -hHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCC---CCceEEEEeCCCCCC--CCCCcCcch-HHHh-
Q 012190 221 -FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNP---TIDLILILSNPATSF--GRSQLQPLF-PILK- 292 (468)
Q Consensus 221 -~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P---~~v~~lVli~p~~~~--~~~~~~~~~-~~~~- 292 (468)
-..+.+|+.+++++++.++|..|++.+|.||||.+.+.|..+-. ..+.++.+.+|+-.+ ......... ..+.
T Consensus 176 f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~ 255 (409)
T KOG1838|consen 176 FTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLYRRFYNR 255 (409)
T ss_pred eecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccchHHHHH
Confidence 24577899999999999999999999999999999999998743 345566666664422 000000000 0000
Q ss_pred hCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHh
Q 012190 293 AMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYAN 372 (468)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 372 (468)
.+...+.......-..+..++..+.. ..+..+.+++.+.+... .+.-+... ..++.. ...
T Consensus 256 ~l~~~l~~~~~~~r~~~~~~~vd~d~--~~~~~SvreFD~~~t~~-------------~~gf~~~d---eYY~~a--Ss~ 315 (409)
T KOG1838|consen 256 ALTLNLKRIVLRHRHTLFEDPVDFDV--ILKSRSVREFDEALTRP-------------MFGFKSVD---EYYKKA--SSS 315 (409)
T ss_pred HHHHhHHHHHhhhhhhhhhccchhhh--hhhcCcHHHHHhhhhhh-------------hcCCCcHH---HHHhhc--chh
Confidence 00000000000000001111111100 00111111111111100 00111111 111111 113
Q ss_pred hhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccC
Q 012190 373 SRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEE 425 (468)
Q Consensus 373 ~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~ 425 (468)
..+.+|++|+|+|.+.+|+++|+..--....+..|++-+++-..+||..++|.
T Consensus 316 ~~v~~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg 368 (409)
T KOG1838|consen 316 NYVDKIKVPLLCINAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEG 368 (409)
T ss_pred hhcccccccEEEEecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeecc
Confidence 56789999999999999999999622334455667888888888999999987
No 70
>PLN00021 chlorophyllase
Probab=99.57 E-value=8.6e-14 Score=134.81 Aligned_cols=101 Identities=20% Similarity=0.121 Sum_probs=74.6
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhh----------cCCCCcEEE
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHA----------SSPEKPIYL 246 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~----------~~~~~~i~L 246 (468)
+.|+|||+||++.+...|..+++.| +.+|.|+++|++|++.++.....++..++++.+.. ....+++++
T Consensus 51 ~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l 130 (313)
T PLN00021 51 TYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLAL 130 (313)
T ss_pred CCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCchhhHHHHHHHHHHHHhhhhhhcccccccChhheEE
Confidence 4789999999999999999999999 46799999999987654222222222222222221 112358999
Q ss_pred EEeChhHHHHHHHHHhCCC-----CceEEEEeCCCCC
Q 012190 247 VGDSFGGCLALAVAARNPT-----IDLILILSNPATS 278 (468)
Q Consensus 247 vGhS~GG~ia~~~a~~~P~-----~v~~lVli~p~~~ 278 (468)
+||||||.+|+.+|.++++ .+.++|+++|...
T Consensus 131 ~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g 167 (313)
T PLN00021 131 AGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDG 167 (313)
T ss_pred EEECcchHHHHHHHhhccccccccceeeEEeeccccc
Confidence 9999999999999999874 5789999988653
No 71
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.56 E-value=3.8e-13 Score=121.25 Aligned_cols=210 Identities=18% Similarity=0.234 Sum_probs=135.2
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeC
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-------PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS 250 (468)
..+.++++|=.||++..|..+...|.....++++++||+|.- +++.+++.+...+.. ....+|+.++|||
T Consensus 6 ~~~~L~cfP~AGGsa~~fr~W~~~lp~~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~---~~~d~P~alfGHS 82 (244)
T COG3208 6 ARLRLFCFPHAGGSASLFRSWSRRLPADIELLAVQLPGRGDRFGEPLLTDIESLADELANELLP---PLLDAPFALFGHS 82 (244)
T ss_pred CCceEEEecCCCCCHHHHHHHHhhCCchhheeeecCCCcccccCCcccccHHHHHHHHHHHhcc---ccCCCCeeecccc
Confidence 356799999999999999999999988999999999999854 567777766666652 2456799999999
Q ss_pred hhHHHHHHHHHhCC---CCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCCh
Q 012190 251 FGGCLALAVAARNP---TIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPP 327 (468)
Q Consensus 251 ~GG~ia~~~a~~~P---~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (468)
|||++|.++|.+.. -...++.+.+.... ........ ....+. . +-..+..+.+.+ +
T Consensus 83 mGa~lAfEvArrl~~~g~~p~~lfisg~~aP-~~~~~~~i----~~~~D~--~-~l~~l~~lgG~p-------------~ 141 (244)
T COG3208 83 MGAMLAFEVARRLERAGLPPRALFISGCRAP-HYDRGKQI----HHLDDA--D-FLADLVDLGGTP-------------P 141 (244)
T ss_pred hhHHHHHHHHHHHHHcCCCcceEEEecCCCC-CCcccCCc----cCCCHH--H-HHHHHHHhCCCC-------------h
Confidence 99999999997741 12555666554332 11110100 000100 0 001111111111 1
Q ss_pred hHH-hhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHH----HhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHH
Q 012190 328 RIK-LEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKS----ASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRL 402 (468)
Q Consensus 328 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l 402 (468)
+.+ .+++.. ..+-.++. ...+-...-..+.||+.++.|++|..+..+ ....+
T Consensus 142 e~led~El~~----------------------l~LPilRAD~~~~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~-~~~~W 198 (244)
T COG3208 142 ELLEDPELMA----------------------LFLPILRADFRALESYRYPPPAPLACPIHAFGGEKDHEVSRD-ELGAW 198 (244)
T ss_pred HHhcCHHHHH----------------------HHHHHHHHHHHHhcccccCCCCCcCcceEEeccCcchhccHH-HHHHH
Confidence 000 111111 11111110 011111223678999999999999999998 68878
Q ss_pred HHhCC-CcEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 403 NNSLQ-NCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 403 ~~~l~-~~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
.+... ..++.+++| |||...++.+++...|.+
T Consensus 199 ~~~t~~~f~l~~fdG-gHFfl~~~~~~v~~~i~~ 231 (244)
T COG3208 199 REHTKGDFTLRVFDG-GHFFLNQQREEVLARLEQ 231 (244)
T ss_pred HHhhcCCceEEEecC-cceehhhhHHHHHHHHHH
Confidence 88776 779999995 999999999999998883
No 72
>PLN02442 S-formylglutathione hydrolase
Probab=99.56 E-value=5.3e-13 Score=128.32 Aligned_cols=113 Identities=14% Similarity=0.183 Sum_probs=78.8
Q ss_pred eeeecCCCCCCCCCCeEEEeCCCCCchhhHHHh---Hhhh-cCCeEEEEecCCCCC-----CC-----------------
Q 012190 166 WFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILH---HKPL-GKAFEVRCLHIPVYD-----RT----------------- 219 (468)
Q Consensus 166 ~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~---~~~L-~~~~~V~~~D~~G~G-----~S----------------- 219 (468)
+.-|.+.+.+..+.|+|+|+||++++...|... ...+ ..++.|+.+|..++| .+
T Consensus 34 ~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 113 (283)
T PLN02442 34 FSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQ 113 (283)
T ss_pred EEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeecccc
Confidence 333444333234579999999999998777542 2444 458999999987665 11
Q ss_pred ------C-hHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCC
Q 012190 220 ------P-FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (468)
Q Consensus 220 ------s-~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~ 278 (468)
. .+.+.+++...++........++++++||||||..|+.++.++|+++.++++++|...
T Consensus 114 ~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 179 (283)
T PLN02442 114 EKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIAN 179 (283)
T ss_pred CCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccC
Confidence 0 0223455555555543334556899999999999999999999999999999988654
No 73
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.55 E-value=3.5e-13 Score=129.19 Aligned_cols=100 Identities=16% Similarity=0.200 Sum_probs=73.5
Q ss_pred CCCeEEEeCCCCCchhhHHHh--Hhhh--cCCeEEEEecC--CCCCCCC----------------------------hHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILH--HKPL--GKAFEVRCLHI--PVYDRTP----------------------------FEG 223 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~--~~~L--~~~~~V~~~D~--~G~G~Ss----------------------------~~~ 223 (468)
+.|+|+|+||++++...|... +..+ ..++.|+++|. +|+|.+. ...
T Consensus 41 ~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~ 120 (275)
T TIGR02821 41 PVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSY 120 (275)
T ss_pred CCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHH
Confidence 478999999999998887542 3455 24799999998 5554211 122
Q ss_pred HHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCC
Q 012190 224 LVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (468)
Q Consensus 224 ~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~ 278 (468)
+++++..+++.... ...++++++||||||.+|+.++.++|+.+.++++++|...
T Consensus 121 ~~~~l~~~~~~~~~-~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 174 (275)
T TIGR02821 121 IVQELPALVAAQFP-LDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVA 174 (275)
T ss_pred HHHHHHHHHHhhCC-CCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccC
Confidence 34555555554211 2346899999999999999999999999999999988754
No 74
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.54 E-value=1.8e-13 Score=119.52 Aligned_cols=208 Identities=13% Similarity=0.164 Sum_probs=128.2
Q ss_pred CCeEEEeCCCCCchh--hHHHhHhhh-cCCeEEEEecCCCCCCCC-------hHHHHHHHHHHHHHHhhcCCCCcEEEEE
Q 012190 179 SPTLLFLPGIDGLGL--GLILHHKPL-GKAFEVRCLHIPVYDRTP-------FEGLVKFVEETVRREHASSPEKPIYLVG 248 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~--~~~~~~~~L-~~~~~V~~~D~~G~G~Ss-------~~~~~~dl~~~i~~~~~~~~~~~i~LvG 248 (468)
...+|++||+-++.. ....++.+| ..++.++-+|++|.|.|+ ....++|+..+++++......-+ +++|
T Consensus 33 ~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~nr~v~-vi~g 111 (269)
T KOG4667|consen 33 TEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSNRVVP-VILG 111 (269)
T ss_pred ceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCceEEE-EEEe
Confidence 568999999988866 456677888 568999999999999994 56677999999999764311112 4799
Q ss_pred eChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChh
Q 012190 249 DSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPR 328 (468)
Q Consensus 249 hS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (468)
||-||.+++.+|.++++ +.-+|-+++.... .. . +-..+.+. .+.++....+ ...++.
T Consensus 112 HSkGg~Vvl~ya~K~~d-~~~viNcsGRydl-~~----~--I~eRlg~~-------~l~~ike~Gf--------id~~~r 168 (269)
T KOG4667|consen 112 HSKGGDVVLLYASKYHD-IRNVINCSGRYDL-KN----G--INERLGED-------YLERIKEQGF--------IDVGPR 168 (269)
T ss_pred ecCccHHHHHHHHhhcC-chheEEcccccch-hc----c--hhhhhccc-------HHHHHHhCCc--------eecCcc
Confidence 99999999999999976 5555555442211 00 0 00000000 0000000000 000000
Q ss_pred HHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhc--ccCCceEEEEEeCCCCCCCcHHHHHHHHHhC
Q 012190 329 IKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRL--HAVKAEVLVLASGKDNMLPSEDEAKRLNNSL 406 (468)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l--~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l 406 (468)
..++. ..+..+.+...+. ...-+.. -..+||||-+||..|.++|.+ ++.++++.+
T Consensus 169 --kG~y~--------------~rvt~eSlmdrLn------td~h~aclkId~~C~VLTvhGs~D~IVPve-~AkefAk~i 225 (269)
T KOG4667|consen 169 --KGKYG--------------YRVTEESLMDRLN------TDIHEACLKIDKQCRVLTVHGSEDEIVPVE-DAKEFAKII 225 (269)
T ss_pred --cCCcC--------------ceecHHHHHHHHh------chhhhhhcCcCccCceEEEeccCCceeech-hHHHHHHhc
Confidence 00000 0011112211111 1111222 234799999999999999999 799999999
Q ss_pred CCcEEEEeCCCCccccccCcHHHHHHHH
Q 012190 407 QNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (468)
Q Consensus 407 ~~~~~~~i~~aGH~~~~e~p~~~~~~I~ 434 (468)
|+-++.+++|+.|.....+ .+......
T Consensus 226 ~nH~L~iIEgADHnyt~~q-~~l~~lgl 252 (269)
T KOG4667|consen 226 PNHKLEIIEGADHNYTGHQ-SQLVSLGL 252 (269)
T ss_pred cCCceEEecCCCcCccchh-hhHhhhcc
Confidence 9999999999999976543 34444444
No 75
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.49 E-value=3.9e-13 Score=125.08 Aligned_cols=242 Identities=17% Similarity=0.171 Sum_probs=137.5
Q ss_pred eecCCCCCCCCCCeEEEeCCCCCchhh-HHHh-----HhhhcCCeEEEEecCCCCCCC-----------ChHHHHHHHHH
Q 012190 168 CPVDCGRPLKGSPTLLFLPGIDGLGLG-LILH-----HKPLGKAFEVRCLHIPVYDRT-----------PFEGLVKFVEE 230 (468)
Q Consensus 168 ~y~~~g~~~~~~p~lV~lHG~~~s~~~-~~~~-----~~~L~~~~~V~~~D~~G~G~S-----------s~~~~~~dl~~ 230 (468)
+...+|.+..++|++|-.|..|.+... |..+ .+.+.+.|-++-+|.||+..- +++++++++.+
T Consensus 12 ~V~v~G~~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~ 91 (283)
T PF03096_consen 12 HVTVQGDPKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPE 91 (283)
T ss_dssp EEEEESS--TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----TT-----HHHHHCTHHH
T ss_pred EEEEEecCCCCCceEEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCcccccccccccCHHHHHHHHHH
Confidence 555567765569999999999999886 5554 356678999999999999753 68999999999
Q ss_pred HHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcch--HHHhh-Cch-hH-HhhHHHH
Q 012190 231 TVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLF--PILKA-MPD-EL-HCAVPYL 305 (468)
Q Consensus 231 ~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~--~~~~~-~~~-~~-~~~~~~~ 305 (468)
++++++. +.++.+|-..||.|.+.+|..||++|.|+||++|.... ..|..+. .+... +.. .+ ......+
T Consensus 92 Vl~~f~l----k~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~--~gw~Ew~~~K~~~~~L~~~gmt~~~~d~L 165 (283)
T PF03096_consen 92 VLDHFGL----KSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTA--AGWMEWFYQKLSSWLLYSYGMTSSVKDYL 165 (283)
T ss_dssp HHHHHT-------EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S-----HHHHHHHHHH-------CTTS-HHHHH
T ss_pred HHHhCCc----cEEEEEeeccchhhhhhccccCccceeEEEEEecCCCC--ccHHHHHHHHHhcccccccccccchHHhh
Confidence 9999654 48999999999999999999999999999999986532 2222211 00000 000 00 0011111
Q ss_pred hhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEE
Q 012190 306 LSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVL 385 (468)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI 385 (468)
+...++..... . ..++.+.+. ..+.+...+..+...++.+... .++...+....||+|++
T Consensus 166 l~h~Fg~~~~~------~-------n~Dlv~~yr------~~l~~~~Np~Nl~~f~~sy~~R-~DL~~~~~~~~c~vLlv 225 (283)
T PF03096_consen 166 LWHYFGKEEEE------N-------NSDLVQTYR------QHLDERINPKNLALFLNSYNSR-TDLSIERPSLGCPVLLV 225 (283)
T ss_dssp HHHHS-HHHHH------C-------T-HHHHHHH------HHHHT-TTHHHHHHHHHHHHT------SECTTCCS-EEEE
T ss_pred hhccccccccc------c-------cHHHHHHHH------HHHhcCCCHHHHHHHHHHHhcc-ccchhhcCCCCCCeEEE
Confidence 22222211100 0 011111111 1111222333343333333322 22344557778999999
Q ss_pred EeCCCCCCCcHHHHHHHHHhCC--CcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 386 ASGKDNMLPSEDEAKRLNNSLQ--NCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 386 ~G~~D~~v~~~~~~~~l~~~l~--~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
.|++.+... +...+...+. ++++..++++|=.+..|+|.++++.++ -|++
T Consensus 226 vG~~Sp~~~---~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~--lFlQ 277 (283)
T PF03096_consen 226 VGDNSPHVD---DVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFK--LFLQ 277 (283)
T ss_dssp EETTSTTHH---HHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHH--HHHH
T ss_pred EecCCcchh---hHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHH--HHHc
Confidence 999877643 4556766663 678999999999999999999999998 5544
No 76
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.49 E-value=5.3e-12 Score=116.09 Aligned_cols=95 Identities=22% Similarity=0.220 Sum_probs=83.3
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC--------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEe
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLVGD 249 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGh 249 (468)
..+||=+||.+||...|+.+.+.| ..+.+++++.+||+|.+ +-++....+.++++.+... ++++.+||
T Consensus 35 ~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~---~~~i~~gH 111 (297)
T PF06342_consen 35 LGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIK---GKLIFLGH 111 (297)
T ss_pred ceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCC---CceEEEEe
Confidence 348999999999999999999999 77899999999999988 3577788888888886543 58899999
Q ss_pred ChhHHHHHHHHHhCCCCceEEEEeCCCCC
Q 012190 250 SFGGCLALAVAARNPTIDLILILSNPATS 278 (468)
Q Consensus 250 S~GG~ia~~~a~~~P~~v~~lVli~p~~~ 278 (468)
|.||-.|+.+|..+| ..|+++++|..-
T Consensus 112 SrGcenal~la~~~~--~~g~~lin~~G~ 138 (297)
T PF06342_consen 112 SRGCENALQLAVTHP--LHGLVLINPPGL 138 (297)
T ss_pred ccchHHHHHHHhcCc--cceEEEecCCcc
Confidence 999999999999996 569999999663
No 77
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.49 E-value=6.7e-13 Score=122.57 Aligned_cols=169 Identities=20% Similarity=0.203 Sum_probs=104.7
Q ss_pred CCCeEEEeCCCCCchhhHHHhHh-hh-cCCeEEEEecCCC------CCC---C----------------ChHHHHHHHHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHK-PL-GKAFEVRCLHIPV------YDR---T----------------PFEGLVKFVEE 230 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~-~L-~~~~~V~~~D~~G------~G~---S----------------s~~~~~~dl~~ 230 (468)
..++|||+||+|++...+..... .+ .....+++++-|. .|. + .+++.++.+.+
T Consensus 13 ~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l~~ 92 (216)
T PF02230_consen 13 AKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERLDE 92 (216)
T ss_dssp -SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHHHH
T ss_pred CceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHHHH
Confidence 57899999999999977776655 22 3456666655431 122 1 13444556666
Q ss_pred HHHHHhhc-CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhh
Q 012190 231 TVRREHAS-SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYV 309 (468)
Q Consensus 231 ~i~~~~~~-~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (468)
+++.+... .+.++|+|+|+|.||++|+.++.++|+.+.++|++++.......
T Consensus 93 li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~--------------------------- 145 (216)
T PF02230_consen 93 LIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESE--------------------------- 145 (216)
T ss_dssp HHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCC---------------------------
T ss_pred HHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeecccccccc---------------------------
Confidence 66654432 35678999999999999999999999999999999874421000
Q ss_pred cCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCC
Q 012190 310 MGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGK 389 (468)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~ 389 (468)
.... .. ..-++|++++||+.
T Consensus 146 ------------------------~~~~----------------------------------~~--~~~~~pi~~~hG~~ 165 (216)
T PF02230_consen 146 ------------------------LEDR----------------------------------PE--ALAKTPILIIHGDE 165 (216)
T ss_dssp ------------------------CHCC----------------------------------HC--CCCTS-EEEEEETT
T ss_pred ------------------------cccc----------------------------------cc--ccCCCcEEEEecCC
Confidence 0000 00 11278999999999
Q ss_pred CCCCCcHHHHHHHHHhCC----CcEEEEeCCCCccccccCcHHHHHHHH
Q 012190 390 DNMLPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (468)
Q Consensus 390 D~~v~~~~~~~~l~~~l~----~~~~~~i~~aGH~~~~e~p~~~~~~I~ 434 (468)
|+++|.+ ..+...+.+. ++++..+++.||.+..+.=..+.+.|.
T Consensus 166 D~vvp~~-~~~~~~~~L~~~~~~v~~~~~~g~gH~i~~~~~~~~~~~l~ 213 (216)
T PF02230_consen 166 DPVVPFE-WAEKTAEFLKAAGANVEFHEYPGGGHEISPEELRDLREFLE 213 (216)
T ss_dssp -SSSTHH-HHHHHHHHHHCTT-GEEEEEETT-SSS--HHHHHHHHHHHH
T ss_pred CCcccHH-HHHHHHHHHHhcCCCEEEEEcCCCCCCCCHHHHHHHHHHHh
Confidence 9999988 5777766653 579999999999997555454444444
No 78
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.47 E-value=4.8e-13 Score=142.08 Aligned_cols=217 Identities=17% Similarity=0.192 Sum_probs=127.5
Q ss_pred cCccCCCCCC-ceeeeecCCCCCCCCCCeEEEeCCCCCchhh--HHHhHhhh-cCCeEEEEecCCCCCCC----------
Q 012190 154 KEIIKPDGGP-PRWFCPVDCGRPLKGSPTLLFLPGIDGLGLG--LILHHKPL-GKAFEVRCLHIPVYDRT---------- 219 (468)
Q Consensus 154 ~~~~~~dg~~-~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~--~~~~~~~L-~~~~~V~~~D~~G~G~S---------- 219 (468)
-.+...||.. ..|+.....-.+.++-|+||++||.+..... |....+.| ..+|.|+.+++||-+.-
T Consensus 368 ~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~ 447 (620)
T COG1506 368 VTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRG 447 (620)
T ss_pred EEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhh
Confidence 3445667744 3443332222222235899999999766554 56667777 78999999999975432
Q ss_pred -----ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhC
Q 012190 220 -----PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAM 294 (468)
Q Consensus 220 -----s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~ 294 (468)
+.+|+.+.+. ++.... ....+++.++|||+||.+++..+.+.| .+++.+...+............
T Consensus 448 ~~g~~~~~D~~~~~~-~l~~~~-~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~~~~~~~------- 517 (620)
T COG1506 448 DWGGVDLEDLIAAVD-ALVKLP-LVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLLYFGEST------- 517 (620)
T ss_pred ccCCccHHHHHHHHH-HHHhCC-CcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhhhccccc-------
Confidence 2444444444 332211 112458999999999999999999887 6666666555331100000000
Q ss_pred chhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhh
Q 012190 295 PDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSR 374 (468)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 374 (468)
..... ........+ ...... .....+ ...
T Consensus 518 ~~~~~-----~~~~~~~~~--------------------------------------~~~~~~-----~~~~sp---~~~ 546 (620)
T COG1506 518 EGLRF-----DPEENGGGP--------------------------------------PEDREK-----YEDRSP---IFY 546 (620)
T ss_pred hhhcC-----CHHHhCCCc--------------------------------------ccChHH-----HHhcCh---hhh
Confidence 00000 000000000 000000 000000 123
Q ss_pred cccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC----CcEEEEeCCCCccccccCcHHHHHHHH
Q 012190 375 LHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIK 434 (468)
Q Consensus 375 l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~----~~~~~~i~~aGH~~~~e~p~~~~~~I~ 434 (468)
..++++|+|+|||+.|..++.+ ++.++.+.+. +++++++|+.||.+-- |+...+.++
T Consensus 547 ~~~i~~P~LliHG~~D~~v~~~-q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~--~~~~~~~~~ 607 (620)
T COG1506 547 ADNIKTPLLLIHGEEDDRVPIE-QAEQLVDALKRKGKPVELVVFPDEGHGFSR--PENRVKVLK 607 (620)
T ss_pred hcccCCCEEEEeecCCccCChH-HHHHHHHHHHHcCceEEEEEeCCCCcCCCC--chhHHHHHH
Confidence 4789999999999999999999 7988888774 6799999999999876 444444443
No 79
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.47 E-value=3.9e-13 Score=123.91 Aligned_cols=185 Identities=18% Similarity=0.150 Sum_probs=111.8
Q ss_pred HHHhHhhh-cCCeEEEEecCCCCCCC----------C-hHHHHHHHHHHHHHHhhcC--CCCcEEEEEeChhHHHHHHHH
Q 012190 195 LILHHKPL-GKAFEVRCLHIPVYDRT----------P-FEGLVKFVEETVRREHASS--PEKPIYLVGDSFGGCLALAVA 260 (468)
Q Consensus 195 ~~~~~~~L-~~~~~V~~~D~~G~G~S----------s-~~~~~~dl~~~i~~~~~~~--~~~~i~LvGhS~GG~ia~~~a 260 (468)
|......| ++||.|+.+|+||.+.. . -...++|+.++++.+.... ..++|.++|||+||.+++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 34456677 78999999999998754 1 1345667777777765442 346899999999999999999
Q ss_pred HhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcch
Q 012190 261 ARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPA 340 (468)
Q Consensus 261 ~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (468)
.++|++++++|..+|............ . .... . .... ..+ .. ...
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~~~~~~~~-------~--~~~~--~-~~~~-~~~-----------~~----~~~------- 127 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLFSYYGTTD-------I--YTKA--E-YLEY-GDP-----------WD----NPE------- 127 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTTCSBHHTC-------C--HHHG--H-HHHH-SST-----------TT----SHH-------
T ss_pred cccceeeeeeeccceecchhccccccc-------c--cccc--c-cccc-Ccc-----------ch----hhh-------
Confidence 999999999999988654322110000 0 0000 0 0000 000 00 000
Q ss_pred hcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhccc--CCceEEEEEeCCCCCCCcHHHHHHHHHhCC----CcEEEEe
Q 012190 341 LLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHA--VKAEVLVLASGKDNMLPSEDEAKRLNNSLQ----NCIVRNF 414 (468)
Q Consensus 341 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~--i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~----~~~~~~i 414 (468)
.+..... ...+.+ +++|+|++||++|..+|+. .+.++.+.+. +++++++
T Consensus 128 ----------------------~~~~~s~--~~~~~~~~~~~P~li~hG~~D~~Vp~~-~s~~~~~~L~~~g~~~~~~~~ 182 (213)
T PF00326_consen 128 ----------------------FYRELSP--ISPADNVQIKPPVLIIHGENDPRVPPS-QSLRLYNALRKAGKPVELLIF 182 (213)
T ss_dssp ----------------------HHHHHHH--GGGGGGCGGGSEEEEEEETTBSSSTTH-HHHHHHHHHHHTTSSEEEEEE
T ss_pred ----------------------hhhhhcc--ccccccccCCCCEEEEccCCCCccCHH-HHHHHHHHHHhcCCCEEEEEc
Confidence 0000000 123344 8899999999999999999 7888877663 5899999
Q ss_pred CCCCccccc-cCcHHHHHHHHhcCcccc
Q 012190 415 KDNGHTLLL-EEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 415 ~~aGH~~~~-e~p~~~~~~I~~~~F~~r 441 (468)
|++||.+.. +...+..+.+. .|+++
T Consensus 183 p~~gH~~~~~~~~~~~~~~~~--~f~~~ 208 (213)
T PF00326_consen 183 PGEGHGFGNPENRRDWYERIL--DFFDK 208 (213)
T ss_dssp TT-SSSTTSHHHHHHHHHHHH--HHHHH
T ss_pred CcCCCCCCCchhHHHHHHHHH--HHHHH
Confidence 999995543 23333444444 45443
No 80
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.46 E-value=4.2e-12 Score=116.44 Aligned_cols=249 Identities=14% Similarity=0.121 Sum_probs=157.8
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhh-HHHh-----HhhhcCCeEEEEecCCCCCCC----------
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLG-LILH-----HKPLGKAFEVRCLHIPVYDRT---------- 219 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~-~~~~-----~~~L~~~~~V~~~D~~G~G~S---------- 219 (468)
+.+..|.. +...+|.+..++|++|=.|.++.+... |..+ +..+...|-|+-+|.|||..-
T Consensus 27 V~T~~G~v----~V~V~Gd~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~fcv~HV~~PGqe~gAp~~p~~y~y 102 (326)
T KOG2931|consen 27 VETAHGVV----HVTVYGDPKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEHFCVYHVDAPGQEDGAPSFPEGYPY 102 (326)
T ss_pred eccccccE----EEEEecCCCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhheEEEecCCCccccCCccCCCCCCC
Confidence 44555443 667778876678999999999999886 5543 456666799999999998532
Q ss_pred -ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCch--
Q 012190 220 -PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPD-- 296 (468)
Q Consensus 220 -s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~-- 296 (468)
+++++++++..++++ +..+.|+-+|...||.|..++|..||++|.|+||+++... ...|..+. ...+..
T Consensus 103 Psmd~LAd~l~~VL~~----f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~--a~gwiew~--~~K~~s~~ 174 (326)
T KOG2931|consen 103 PSMDDLADMLPEVLDH----FGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPC--AKGWIEWA--YNKVSSNL 174 (326)
T ss_pred CCHHHHHHHHHHHHHh----cCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCC--CchHHHHH--HHHHHHHH
Confidence 699999999999999 5566899999999999999999999999999999998542 22222221 111110
Q ss_pred ----hH-HhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHH
Q 012190 297 ----EL-HCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYA 371 (468)
Q Consensus 297 ----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 371 (468)
.+ ......++...++.... .. ..++.+.+. ..+.+......+.-.+..+....+ +
T Consensus 175 l~~~Gmt~~~~d~ll~H~Fg~e~~---------~~----~~diVq~Yr------~~l~~~~N~~Nl~~fl~ayn~R~D-L 234 (326)
T KOG2931|consen 175 LYYYGMTQGVKDYLLAHHFGKEEL---------GN----NSDIVQEYR------QHLGERLNPKNLALFLNAYNGRRD-L 234 (326)
T ss_pred HHhhchhhhHHHHHHHHHhccccc---------cc----cHHHHHHHH------HHHHhcCChhHHHHHHHHhcCCCC-c
Confidence 00 01112222222222210 00 122222222 111122233333333333322211 1
Q ss_pred hhhc----ccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC--CcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 372 NSRL----HAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ--NCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 372 ~~~l----~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~--~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
.... ..++||+|++.|++.+.+.. .......+. ++.+..+.++|-.+..++|.++++.++ -|++.
T Consensus 235 ~~~r~~~~~tlkc~vllvvGd~Sp~~~~---vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~--~FlqG 305 (326)
T KOG2931|consen 235 SIERPKLGTTLKCPVLLVVGDNSPHVSA---VVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFK--YFLQG 305 (326)
T ss_pred cccCCCcCccccccEEEEecCCCchhhh---hhhhhcccCcccceEEEEcccCCcccccCchHHHHHHH--HHHcc
Confidence 1111 25679999999998877543 344444443 678888999999999999999999998 55544
No 81
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.46 E-value=2.7e-12 Score=118.14 Aligned_cols=100 Identities=14% Similarity=0.153 Sum_probs=74.2
Q ss_pred CCCeEEEeCCCCCchhhHH---HhHhhh-cCCeEEEEecCCCCCCCC--h-----------HHHHHHHHHHHHHHhhcC-
Q 012190 178 GSPTLLFLPGIDGLGLGLI---LHHKPL-GKAFEVRCLHIPVYDRTP--F-----------EGLVKFVEETVRREHASS- 239 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~---~~~~~L-~~~~~V~~~D~~G~G~Ss--~-----------~~~~~dl~~~i~~~~~~~- 239 (468)
..|+||++||.+++...+. .+.... ..+|.|+++|++|++.+. + .....++.++++.+....
T Consensus 12 ~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 91 (212)
T TIGR01840 12 PRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYS 91 (212)
T ss_pred CCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcC
Confidence 4789999999999888765 233333 357999999999986431 0 123445555555554433
Q ss_pred -CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 240 -PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 240 -~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
..++++|+|||+||.+++.++.++|+.+.+++.+++..
T Consensus 92 id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~ 130 (212)
T TIGR01840 92 IDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLP 130 (212)
T ss_pred cChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCc
Confidence 34589999999999999999999999999998887644
No 82
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.44 E-value=1.3e-12 Score=115.11 Aligned_cols=155 Identities=19% Similarity=0.240 Sum_probs=102.6
Q ss_pred EEEeCCCCCchh-hHHHh-HhhhcCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHH
Q 012190 182 LLFLPGIDGLGL-GLILH-HKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAV 259 (468)
Q Consensus 182 lV~lHG~~~s~~-~~~~~-~~~L~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~ 259 (468)
|+++||++++.. .|.+. .+.|...++|...++ ..-+.++|.+.+.+.+.. ..++++|||||+|+..++.+
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~~~V~~~~~---~~P~~~~W~~~l~~~i~~-----~~~~~ilVaHSLGc~~~l~~ 72 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENSVRVEQPDW---DNPDLDEWVQALDQAIDA-----IDEPTILVAHSLGCLTALRW 72 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTSEEEEEC-----TS--HHHHHHHHHHCCHC------TTTEEEEEETHHHHHHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCCeEEecccc---CCCCHHHHHHHHHHHHhh-----cCCCeEEEEeCHHHHHHHHH
Confidence 689999999866 56654 455665577777666 344677888777777764 24579999999999999999
Q ss_pred H-HhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhc
Q 012190 260 A-ARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNL 338 (468)
Q Consensus 260 a-~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (468)
+ ...+.+|.|++|++|+......... +. ...+
T Consensus 73 l~~~~~~~v~g~lLVAp~~~~~~~~~~---------~~----------------------------------~~~f---- 105 (171)
T PF06821_consen 73 LAEQSQKKVAGALLVAPFDPDDPEPFP---------PE----------------------------------LDGF---- 105 (171)
T ss_dssp HHHTCCSSEEEEEEES--SCGCHHCCT---------CG----------------------------------GCCC----
T ss_pred HhhcccccccEEEEEcCCCcccccchh---------hh----------------------------------cccc----
Confidence 9 7788899999999985421000000 00 0000
Q ss_pred chhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCC
Q 012190 339 PALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNG 418 (468)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aG 418 (468)
. ......+++|.++|.+++|+++|.+ .++.+++.+ +++++.++++|
T Consensus 106 --------------~------------------~~p~~~l~~~~~viaS~nDp~vp~~-~a~~~A~~l-~a~~~~~~~~G 151 (171)
T PF06821_consen 106 --------------T------------------PLPRDPLPFPSIVIASDNDPYVPFE-RAQRLAQRL-GAELIILGGGG 151 (171)
T ss_dssp --------------T------------------TSHCCHHHCCEEEEEETTBSSS-HH-HHHHHHHHH-T-EEEEETS-T
T ss_pred --------------c------------------cCcccccCCCeEEEEcCCCCccCHH-HHHHHHHHc-CCCeEECCCCC
Confidence 0 0011334567799999999999999 799999998 89999999999
Q ss_pred ccccccC
Q 012190 419 HTLLLEE 425 (468)
Q Consensus 419 H~~~~e~ 425 (468)
|+.-.+-
T Consensus 152 Hf~~~~G 158 (171)
T PF06821_consen 152 HFNAASG 158 (171)
T ss_dssp TSSGGGT
T ss_pred CcccccC
Confidence 9987653
No 83
>COG0400 Predicted esterase [General function prediction only]
Probab=99.40 E-value=9e-12 Score=112.46 Aligned_cols=167 Identities=20% Similarity=0.194 Sum_probs=116.2
Q ss_pred CCCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCC--CC---------CC--ChHHH---HHHHHHHHHHHhhcC-
Q 012190 177 KGSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPV--YD---------RT--PFEGL---VKFVEETVRREHASS- 239 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G--~G---------~S--s~~~~---~~dl~~~i~~~~~~~- 239 (468)
+..|+||++||+|++...+.+....+..++.++.+.-+- .| .. +.+++ ...+.++++....+.
T Consensus 16 p~~~~iilLHG~Ggde~~~~~~~~~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~~g 95 (207)
T COG0400 16 PAAPLLILLHGLGGDELDLVPLPELILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEEYG 95 (207)
T ss_pred CCCcEEEEEecCCCChhhhhhhhhhcCCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHHhC
Confidence 467799999999999999999776666666666543210 11 11 12222 223333333333223
Q ss_pred -CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHH
Q 012190 240 -PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAM 318 (468)
Q Consensus 240 -~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (468)
+..+++++|+|-||.+++.+..++|+.++++|+.+|........
T Consensus 96 i~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~~----------------------------------- 140 (207)
T COG0400 96 IDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPEL----------------------------------- 140 (207)
T ss_pred CChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCcc-----------------------------------
Confidence 34799999999999999999999999999999988754321100
Q ss_pred HhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHH
Q 012190 319 VNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDE 398 (468)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~ 398 (468)
.-..-.+|++++||+.|+++|.. .
T Consensus 141 -------------------------------------------------------~~~~~~~pill~hG~~Dpvvp~~-~ 164 (207)
T COG0400 141 -------------------------------------------------------LPDLAGTPILLSHGTEDPVVPLA-L 164 (207)
T ss_pred -------------------------------------------------------ccccCCCeEEEeccCcCCccCHH-H
Confidence 00233579999999999999999 6
Q ss_pred HHHHHHhCC----CcEEEEeCCCCccccccCcHHHHHHHHh
Q 012190 399 AKRLNNSLQ----NCIVRNFKDNGHTLLLEEGISLLTIIKG 435 (468)
Q Consensus 399 ~~~l~~~l~----~~~~~~i~~aGH~~~~e~p~~~~~~I~~ 435 (468)
+.++.+.+. +++...++ .||.+..|.-+...+.+.+
T Consensus 165 ~~~l~~~l~~~g~~v~~~~~~-~GH~i~~e~~~~~~~wl~~ 204 (207)
T COG0400 165 AEALAEYLTASGADVEVRWHE-GGHEIPPEELEAARSWLAN 204 (207)
T ss_pred HHHHHHHHHHcCCCEEEEEec-CCCcCCHHHHHHHHHHHHh
Confidence 888877664 67888888 8999987766666665553
No 84
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.39 E-value=7.7e-12 Score=115.69 Aligned_cols=159 Identities=21% Similarity=0.200 Sum_probs=110.1
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCC---CC---------------hHHHHHHHHHHHHHHhhc
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDR---TP---------------FEGLVKFVEETVRREHAS 238 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~---Ss---------------~~~~~~dl~~~i~~~~~~ 238 (468)
+.|.||++|+..|-....+.++..| +.||.|+++|+-+-.. ++ .+...+++...++.+...
T Consensus 13 ~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~ 92 (218)
T PF01738_consen 13 PRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQ 92 (218)
T ss_dssp SEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhc
Confidence 3789999999999888888889999 7789999999754433 21 234567777778877755
Q ss_pred C--CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhH
Q 012190 239 S--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKM 316 (468)
Q Consensus 239 ~--~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
. ...+|.++|+|+||.+++.+|.+. +.+++.|...|....
T Consensus 93 ~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg~~~~------------------------------------- 134 (218)
T PF01738_consen 93 PEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYGGSPP------------------------------------- 134 (218)
T ss_dssp TTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-SSSG-------------------------------------
T ss_pred cccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEEcCCCCC-------------------------------------
Confidence 3 357999999999999999999887 678888887651000
Q ss_pred HHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcH
Q 012190 317 AMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSE 396 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~ 396 (468)
... .....++++|+++++|++|+.++.+
T Consensus 135 --------------~~~--------------------------------------~~~~~~~~~P~l~~~g~~D~~~~~~ 162 (218)
T PF01738_consen 135 --------------PPP--------------------------------------LEDAPKIKAPVLILFGENDPFFPPE 162 (218)
T ss_dssp --------------GGH--------------------------------------HHHGGG--S-EEEEEETT-TTS-HH
T ss_pred --------------Ccc--------------------------------------hhhhcccCCCEeecCccCCCCCChH
Confidence 000 0123678899999999999999998
Q ss_pred HHHHHHHHhC----CCcEEEEeCCCCccccccCcH
Q 012190 397 DEAKRLNNSL----QNCIVRNFKDNGHTLLLEEGI 427 (468)
Q Consensus 397 ~~~~~l~~~l----~~~~~~~i~~aGH~~~~e~p~ 427 (468)
..+.+.+.+ ...++++++|++|........
T Consensus 163 -~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~ 196 (218)
T PF01738_consen 163 -EVEALEEALKAAGVDVEVHVYPGAGHGFANPSRP 196 (218)
T ss_dssp -HHHHHHHHHHCTTTTEEEEEETT--TTTTSTTST
T ss_pred -HHHHHHHHHHhcCCcEEEEECCCCcccccCCCCc
Confidence 577777665 478999999999998776544
No 85
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.38 E-value=5.8e-11 Score=110.53 Aligned_cols=95 Identities=26% Similarity=0.311 Sum_probs=79.5
Q ss_pred CeEEEeCCCCCchhhHHHhHhhhcCC-eEEEEecCCCCCCC-----ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhH
Q 012190 180 PTLLFLPGIDGLGLGLILHHKPLGKA-FEVRCLHIPVYDRT-----PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGG 253 (468)
Q Consensus 180 p~lV~lHG~~~s~~~~~~~~~~L~~~-~~V~~~D~~G~G~S-----s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG 253 (468)
++|+|+|+.+|+...|.++++.|... +.|++++.||.+.. +++++++...+.|... .+..|++|+|||+||
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~~~~si~~la~~y~~~I~~~---~~~gp~~L~G~S~Gg 77 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEPPPDSIEELASRYAEAIRAR---QPEGPYVLAGWSFGG 77 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSHEESSHHHHHHHHHHHHHHH---TSSSSEEEEEETHHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHhhhh---CCCCCeeehccCccH
Confidence 37999999999999999999999886 99999999999733 6888888877777664 344599999999999
Q ss_pred HHHHHHHHhC---CCCceEEEEeCCCC
Q 012190 254 CLALAVAARN---PTIDLILILSNPAT 277 (468)
Q Consensus 254 ~ia~~~a~~~---P~~v~~lVli~p~~ 277 (468)
.+|..+|.+. ...+..++++++..
T Consensus 78 ~lA~E~A~~Le~~G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 78 ILAFEMARQLEEAGEEVSRLILIDSPP 104 (229)
T ss_dssp HHHHHHHHHHHHTT-SESEEEEESCSS
T ss_pred HHHHHHHHHHHHhhhccCceEEecCCC
Confidence 9999999763 45688999999644
No 86
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.37 E-value=5.1e-12 Score=126.25 Aligned_cols=100 Identities=16% Similarity=0.059 Sum_probs=80.2
Q ss_pred CCCeEEEeCCCCCch--hhHHH-hHhhhc---CCeEEEEecCCCCCCCC-------hHHHHHHHHHHHHHHhhc--CCCC
Q 012190 178 GSPTLLFLPGIDGLG--LGLIL-HHKPLG---KAFEVRCLHIPVYDRTP-------FEGLVKFVEETVRREHAS--SPEK 242 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~--~~~~~-~~~~L~---~~~~V~~~D~~G~G~Ss-------~~~~~~dl~~~i~~~~~~--~~~~ 242 (468)
+.|++|++||++++. ..|.+ +.+.|. ..++|+++|++|+|.+. ....++++.++++.+... .+.+
T Consensus 40 ~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l~ 119 (442)
T TIGR03230 40 ETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPWD 119 (442)
T ss_pred CCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 578999999998764 45765 555552 36999999999999873 345567777778776432 3457
Q ss_pred cEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 243 PIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 243 ~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
+++||||||||.+|..++.++|++|.++++++|+.
T Consensus 120 ~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAg 154 (442)
T TIGR03230 120 NVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAG 154 (442)
T ss_pred cEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCC
Confidence 99999999999999999999999999999999975
No 87
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.36 E-value=5e-11 Score=121.28 Aligned_cols=117 Identities=14% Similarity=0.009 Sum_probs=94.6
Q ss_pred ceeeeecCCCCCCCCCCeEEEeCCCCCchhhH-----HHhHhhh-cCCeEEEEecCCCCCCC----ChHHHHHHHHHHHH
Q 012190 164 PRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGL-----ILHHKPL-GKAFEVRCLHIPVYDRT----PFEGLVKFVEETVR 233 (468)
Q Consensus 164 ~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~-----~~~~~~L-~~~~~V~~~D~~G~G~S----s~~~~~~dl~~~i~ 233 (468)
...++|.+... ..-+++||++|.+-.....+ ..+++.| .+||+|+++|+++-+.. +++|+++.+.+.++
T Consensus 201 ~eLiqY~P~te-~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r~~~ldDYv~~i~~Ald 279 (560)
T TIGR01839 201 LELIQYKPITE-QQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHREWGLSTYVDALKEAVD 279 (560)
T ss_pred eEEEEeCCCCC-CcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhcCCCHHHHHHHHHHHHH
Confidence 45667755432 13466899999998666655 3577888 88999999999887655 58999999999999
Q ss_pred HHhhcCCCCcEEEEEeChhHHHHHH----HHHhCCC-CceEEEEeCCCCCCCC
Q 012190 234 REHASSPEKPIYLVGDSFGGCLALA----VAARNPT-IDLILILSNPATSFGR 281 (468)
Q Consensus 234 ~~~~~~~~~~i~LvGhS~GG~ia~~----~a~~~P~-~v~~lVli~p~~~~~~ 281 (468)
.+....+.+++.++||||||.+++. +++++++ +|++++++.+...+..
T Consensus 280 ~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~ 332 (560)
T TIGR01839 280 AVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTM 332 (560)
T ss_pred HHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCC
Confidence 9888888899999999999999986 8889986 7999999888777654
No 88
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.36 E-value=1.3e-11 Score=116.15 Aligned_cols=100 Identities=18% Similarity=0.157 Sum_probs=71.7
Q ss_pred CCeEEEeCCCCCchh---hHHHhHhhhc-CCeEEEEecC----CCCCCCChHHHHHHHHHHHHHHhhcC----CCCcEEE
Q 012190 179 SPTLLFLPGIDGLGL---GLILHHKPLG-KAFEVRCLHI----PVYDRTPFEGLVKFVEETVRREHASS----PEKPIYL 246 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~---~~~~~~~~L~-~~~~V~~~D~----~G~G~Ss~~~~~~dl~~~i~~~~~~~----~~~~i~L 246 (468)
...|||+.|++.... +...+++.|. .+|.|+-+-+ .|+|.++++.-+++|.+++++++... ..++|+|
T Consensus 33 ~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVL 112 (303)
T PF08538_consen 33 PNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSLDRDVEEIAQLVEYLRSEKGGHFGREKIVL 112 (303)
T ss_dssp SSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--HHHHHHHHHHHHHHHHHHS------S-EEE
T ss_pred CcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchhhhHHHHHHHHHHHHHHhhccccCCccEEE
Confidence 558999999987655 5677888884 5799888764 79999999999999999999988763 4679999
Q ss_pred EEeChhHHHHHHHHHhCC-----CCceEEEEeCCCCC
Q 012190 247 VGDSFGGCLALAVAARNP-----TIDLILILSNPATS 278 (468)
Q Consensus 247 vGhS~GG~ia~~~a~~~P-----~~v~~lVli~p~~~ 278 (468)
+|||.|+.-+++|+.... ..|+|+||-+|...
T Consensus 113 mGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSD 149 (303)
T PF08538_consen 113 MGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSD 149 (303)
T ss_dssp EEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---
T ss_pred EecCCCcHHHHHHHhccCccccccceEEEEEeCCCCC
Confidence 999999999999998752 67999999998663
No 89
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.33 E-value=9e-12 Score=119.00 Aligned_cols=101 Identities=15% Similarity=0.069 Sum_probs=79.8
Q ss_pred CCCeEEEeCCCCCch-hhHHHh-Hhhh-c-CCeEEEEecCCCCCCCC-------hHHHHHHHHHHHHHHhhc--CCCCcE
Q 012190 178 GSPTLLFLPGIDGLG-LGLILH-HKPL-G-KAFEVRCLHIPVYDRTP-------FEGLVKFVEETVRREHAS--SPEKPI 244 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~-~~~~~~-~~~L-~-~~~~V~~~D~~G~G~Ss-------~~~~~~dl~~~i~~~~~~--~~~~~i 244 (468)
++|++|++||++++. ..|... ...+ . .+++|+++|+++++.+. .+.+.+++..+++.+... .+.+++
T Consensus 35 ~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~i 114 (275)
T cd00707 35 SRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLENV 114 (275)
T ss_pred CCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHHE
Confidence 478999999999988 566554 3434 3 57999999999986543 344556777777776543 345689
Q ss_pred EEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCC
Q 012190 245 YLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (468)
Q Consensus 245 ~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~ 278 (468)
+||||||||.+|..++.++|+++.++++++|+..
T Consensus 115 ~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 115 HLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred EEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 9999999999999999999999999999999764
No 90
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.32 E-value=1.3e-10 Score=112.81 Aligned_cols=205 Identities=16% Similarity=0.083 Sum_probs=116.7
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCC-C--------------------C------hHHHHHHHHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDR-T--------------------P------FEGLVKFVEE 230 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~-S--------------------s------~~~~~~dl~~ 230 (468)
.-|.||.+||.++....+...+..-..+|-|+.+|.||+|. + + +..+..|...
T Consensus 82 ~~Pavv~~hGyg~~~~~~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~r 161 (320)
T PF05448_consen 82 KLPAVVQFHGYGGRSGDPFDLLPWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVR 161 (320)
T ss_dssp SEEEEEEE--TT--GGGHHHHHHHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHH
T ss_pred CcCEEEEecCCCCCCCCcccccccccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHH
Confidence 47899999999999877777666558899999999999993 2 0 2334566666
Q ss_pred HHHHHhhcC--CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCc-hhHHhhHHHHhh
Q 012190 231 TVRREHASS--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMP-DELHCAVPYLLS 307 (468)
Q Consensus 231 ~i~~~~~~~--~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 307 (468)
.++.+.... ..++|.+.|.|+||.+++.+|+..| +|+++++..|...- ....+.... ......+..++.
T Consensus 162 avd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d-------~~~~~~~~~~~~~y~~~~~~~~ 233 (320)
T PF05448_consen 162 AVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCD-------FRRALELRADEGPYPEIRRYFR 233 (320)
T ss_dssp HHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSS-------HHHHHHHT--STTTHHHHHHHH
T ss_pred HHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccc-------hhhhhhcCCccccHHHHHHHHh
Confidence 666665432 3578999999999999999999885 69999998875532 111111111 000011111111
Q ss_pred hhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEe
Q 012190 308 YVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLAS 387 (468)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G 387 (468)
..-..+ +..+++. ..+...+. ......|+||+++-.|
T Consensus 234 ~~d~~~---------------~~~~~v~--------------------------~~L~Y~D~--~nfA~ri~~pvl~~~g 270 (320)
T PF05448_consen 234 WRDPHH---------------EREPEVF--------------------------ETLSYFDA--VNFARRIKCPVLFSVG 270 (320)
T ss_dssp HHSCTH---------------CHHHHHH--------------------------HHHHTT-H--HHHGGG--SEEEEEEE
T ss_pred ccCCCc---------------ccHHHHH--------------------------HHHhhhhH--HHHHHHcCCCEEEEEe
Confidence 000000 0011111 11111111 1233789999999999
Q ss_pred CCCCCCCcHHHHHHHHHhCC-CcEEEEeCCCCccccccC-cHHHHHHHH
Q 012190 388 GKDNMLPSEDEAKRLNNSLQ-NCIVRNFKDNGHTLLLEE-GISLLTIIK 434 (468)
Q Consensus 388 ~~D~~v~~~~~~~~l~~~l~-~~~~~~i~~aGH~~~~e~-p~~~~~~I~ 434 (468)
-.|+++||. ..-..++.++ .+++.++|..||....+. .++..+.++
T Consensus 271 l~D~~cPP~-t~fA~yN~i~~~K~l~vyp~~~He~~~~~~~~~~~~~l~ 318 (320)
T PF05448_consen 271 LQDPVCPPS-TQFAAYNAIPGPKELVVYPEYGHEYGPEFQEDKQLNFLK 318 (320)
T ss_dssp TT-SSS-HH-HHHHHHCC--SSEEEEEETT--SSTTHHHHHHHHHHHHH
T ss_pred cCCCCCCch-hHHHHHhccCCCeeEEeccCcCCCchhhHHHHHHHHHHh
Confidence 999999999 6888888886 789999999999876655 454554444
No 91
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.30 E-value=7.2e-11 Score=115.77 Aligned_cols=212 Identities=17% Similarity=0.161 Sum_probs=114.8
Q ss_pred CCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhH-hhh-cCCeEEEEecCCCCCCCC-------hHHHHHHH
Q 012190 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHH-KPL-GKAFEVRCLHIPVYDRTP-------FEGLVKFV 228 (468)
Q Consensus 158 ~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~-~~L-~~~~~V~~~D~~G~G~Ss-------~~~~~~dl 228 (468)
..++..+.+++... +. ...|+||++.|+.+....+..+. ..| ..|+.++++|+||.|.|. .+.+.+.+
T Consensus 172 ~eg~~I~g~LhlP~-~~--~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~l~~aV 248 (411)
T PF06500_consen 172 FEGKTIPGYLHLPS-GE--KPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSRLHQAV 248 (411)
T ss_dssp ETTCEEEEEEEESS-SS--S-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCHHHHHH
T ss_pred eCCcEEEEEEEcCC-CC--CCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHHHHHHHH
Confidence 34444455665444 32 34789999999999987765554 566 789999999999999872 33444445
Q ss_pred HHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhh
Q 012190 229 EETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSY 308 (468)
Q Consensus 229 ~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (468)
.+.+.... .....+|.++|.|+||.+|..+|..++++++++|..+++...--. -.......|......+ ..
T Consensus 249 Ld~L~~~p-~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft----~~~~~~~~P~my~d~L----A~ 319 (411)
T PF06500_consen 249 LDYLASRP-WVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFT----DPEWQQRVPDMYLDVL----AS 319 (411)
T ss_dssp HHHHHHST-TEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-----HHHHTTS-HHHHHHH----HH
T ss_pred HHHHhcCC-ccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhc----cHHHHhcCCHHHHHHH----HH
Confidence 44444421 123568999999999999999999999999999999986522100 0011222222111111 11
Q ss_pred hcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhc--ccCCceEEEEE
Q 012190 309 VMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRL--HAVKAEVLVLA 386 (468)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l--~~i~~PvLlI~ 386 (468)
.++.. ..+ .+.+...+..++ +.. ...+ .+.++|+|.+.
T Consensus 320 rlG~~----------~~~----~~~l~~el~~~S---------Lk~-----------------qGlL~~rr~~~plL~i~ 359 (411)
T PF06500_consen 320 RLGMA----------AVS----DESLRGELNKFS---------LKT-----------------QGLLSGRRCPTPLLAIN 359 (411)
T ss_dssp HCT-S----------CE-----HHHHHHHGGGGS---------TTT-----------------TTTTTSS-BSS-EEEEE
T ss_pred HhCCc----------cCC----HHHHHHHHHhcC---------cch-----------------hccccCCCCCcceEEee
Confidence 10000 000 111111110000 000 1122 67889999999
Q ss_pred eCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCC-cccc
Q 012190 387 SGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNG-HTLL 422 (468)
Q Consensus 387 G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aG-H~~~ 422 (468)
|++|.++|.+ +.+.++..-.+.+...++... |..+
T Consensus 360 ~~~D~v~P~e-D~~lia~~s~~gk~~~~~~~~~~~gy 395 (411)
T PF06500_consen 360 GEDDPVSPIE-DSRLIAESSTDGKALRIPSKPLHMGY 395 (411)
T ss_dssp ETT-SSS-HH-HHHHHHHTBTT-EEEEE-SSSHHHHH
T ss_pred cCCCCCCCHH-HHHHHHhcCCCCceeecCCCccccch
Confidence 9999999999 788888887778888887544 4443
No 92
>PRK10115 protease 2; Provisional
Probab=99.28 E-value=7e-11 Score=126.52 Aligned_cols=226 Identities=17% Similarity=0.121 Sum_probs=139.1
Q ss_pred ccCCCCCC-ceeeeecCCCCCCCCCCeEEEeCCCCCchh--hHHHhHhhh-cCCeEEEEecCCCCCCC------------
Q 012190 156 IIKPDGGP-PRWFCPVDCGRPLKGSPTLLFLPGIDGLGL--GLILHHKPL-GKAFEVRCLHIPVYDRT------------ 219 (468)
Q Consensus 156 ~~~~dg~~-~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~--~~~~~~~~L-~~~~~V~~~D~~G~G~S------------ 219 (468)
+...||.. +.|+.|.+........|+||++||..+... .|......| ++||.|...+.||-|+-
T Consensus 421 ~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~ 500 (686)
T PRK10115 421 ITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLK 500 (686)
T ss_pred EECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhc
Confidence 44567765 456666553222234699999999877764 455555555 88999999999986532
Q ss_pred ---ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCch
Q 012190 220 ---PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPD 296 (468)
Q Consensus 220 ---s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~ 296 (468)
+++|+.+.+..+++.-. ....++.+.|.|.||.++..++.++|++++++|+..|.......... ..++.
T Consensus 501 k~~~~~D~~a~~~~Lv~~g~--~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~------~~~p~ 572 (686)
T PRK10115 501 KKNTFNDYLDACDALLKLGY--GSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLD------ESIPL 572 (686)
T ss_pred CCCcHHHHHHHHHHHHHcCC--CChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhccc------CCCCC
Confidence 45666666655554411 13568999999999999999999999999999998875532111000 00000
Q ss_pred hHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcc
Q 012190 297 ELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLH 376 (468)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~ 376 (468)
... . ....++|.. + .....+..... ...+.
T Consensus 573 ~~~-----~-~~e~G~p~~----------------~--------------------------~~~~~l~~~SP--~~~v~ 602 (686)
T PRK10115 573 TTG-----E-FEEWGNPQD----------------P--------------------------QYYEYMKSYSP--YDNVT 602 (686)
T ss_pred Chh-----H-HHHhCCCCC----------------H--------------------------HHHHHHHHcCc--hhccC
Confidence 000 0 000111100 0 00011111111 12446
Q ss_pred cCCce-EEEEEeCCCCCCCcHHHHHHHHHhCC----CcEEEEe---CCCCccccccCcHHHHHHHHhcCccc
Q 012190 377 AVKAE-VLVLASGKDNMLPSEDEAKRLNNSLQ----NCIVRNF---KDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 377 ~i~~P-vLlI~G~~D~~v~~~~~~~~l~~~l~----~~~~~~i---~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
+++.| +|+++|.+|..||+. ++.++.+.+. +.+++++ +++||..--.+-+.+.+.-..+.|+.
T Consensus 603 ~~~~P~lLi~~g~~D~RV~~~-~~~k~~a~Lr~~~~~~~~vl~~~~~~~GHg~~~~r~~~~~~~A~~~aFl~ 673 (686)
T PRK10115 603 AQAYPHLLVTTGLHDSQVQYW-EPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGRFKSYEGVAMEYAFLI 673 (686)
T ss_pred ccCCCceeEEecCCCCCcCch-HHHHHHHHHHhcCCCCceEEEEecCCCCCCCCcCHHHHHHHHHHHHHHHH
Confidence 67899 567799999999999 7888887774 4567777 89999955545555555555555654
No 93
>PRK10162 acetyl esterase; Provisional
Probab=99.27 E-value=1.7e-10 Score=112.83 Aligned_cols=102 Identities=20% Similarity=0.071 Sum_probs=75.4
Q ss_pred CCCeEEEeCCCC---CchhhHHHhHhhhc--CCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhh---cC--CCCcEEEE
Q 012190 178 GSPTLLFLPGID---GLGLGLILHHKPLG--KAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHA---SS--PEKPIYLV 247 (468)
Q Consensus 178 ~~p~lV~lHG~~---~s~~~~~~~~~~L~--~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~---~~--~~~~i~Lv 247 (468)
+.|+||++||.+ ++...|..++..|. .++.|+.+|+|...+..+....+|+.+.++.+.. .. ..++|+|+
T Consensus 80 ~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~ 159 (318)
T PRK10162 80 SQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFA 159 (318)
T ss_pred CCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEE
Confidence 368999999976 55667778888884 4799999999988776655455555544444321 12 34689999
Q ss_pred EeChhHHHHHHHHHhC------CCCceEEEEeCCCCCC
Q 012190 248 GDSFGGCLALAVAARN------PTIDLILILSNPATSF 279 (468)
Q Consensus 248 GhS~GG~ia~~~a~~~------P~~v~~lVli~p~~~~ 279 (468)
|+|+||.+|+.++.+. +..+.++|++.|....
T Consensus 160 G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 160 GDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred EECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCC
Confidence 9999999999988753 3678999999886643
No 94
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.26 E-value=2.5e-09 Score=101.58 Aligned_cols=100 Identities=22% Similarity=0.306 Sum_probs=85.4
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhh----cCCeEEEEecCCCCCCC-------------ChHHHHHHHHHHHHHHhhcC--
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPL----GKAFEVRCLHIPVYDRT-------------PFEGLVKFVEETVRREHASS-- 239 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L----~~~~~V~~~D~~G~G~S-------------s~~~~~~dl~~~i~~~~~~~-- 239 (468)
++.+||++|.+|-...|..+++.| ...+.|+++.+.||..+ ++++.++...+++++.....
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 457999999999999999988777 25799999999999643 46778888888888777643
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCC---CCceEEEEeCCCCC
Q 012190 240 PEKPIYLVGDSFGGCLALAVAARNP---TIDLILILSNPATS 278 (468)
Q Consensus 240 ~~~~i~LvGhS~GG~ia~~~a~~~P---~~v~~lVli~p~~~ 278 (468)
+..+++|+|||.|+.++++++.+++ .+|.+++++-|...
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIE 123 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccc
Confidence 5779999999999999999999999 78999999998763
No 95
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.24 E-value=9.5e-11 Score=123.28 Aligned_cols=120 Identities=12% Similarity=-0.025 Sum_probs=89.9
Q ss_pred CCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchh---hH-HHhHhhh-cCCeEEEEecCCCCCCCC-----h-HHHHH
Q 012190 158 KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGL---GL-ILHHKPL-GKAFEVRCLHIPVYDRTP-----F-EGLVK 226 (468)
Q Consensus 158 ~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~---~~-~~~~~~L-~~~~~V~~~D~~G~G~Ss-----~-~~~~~ 226 (468)
..||..+....|.+.+. ...|+||++||++.+.. .+ ......| .++|.|+++|+||+|.|+ + ...++
T Consensus 3 ~~DG~~L~~~~~~P~~~--~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~~~~~~ 80 (550)
T TIGR00976 3 MRDGTRLAIDVYRPAGG--GPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLGSDEAA 80 (550)
T ss_pred CCCCCEEEEEEEecCCC--CCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecCcccch
Confidence 45666654434444432 24789999999997653 12 2233455 789999999999999994 2 56788
Q ss_pred HHHHHHHHHhhc-CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCC
Q 012190 227 FVEETVRREHAS-SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSF 279 (468)
Q Consensus 227 dl~~~i~~~~~~-~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~ 279 (468)
|+.++++.+..+ ....+|.++|||+||.+++.+|+++|+.++++|..++....
T Consensus 81 D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~ 134 (550)
T TIGR00976 81 DGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDL 134 (550)
T ss_pred HHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccch
Confidence 888888887644 23468999999999999999999999999999998876543
No 96
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.23 E-value=2.3e-10 Score=98.88 Aligned_cols=168 Identities=20% Similarity=0.224 Sum_probs=117.4
Q ss_pred CCCCeEEEeCCCC-----CchhhHHHhHhhh-cCCeEEEEecCCCCCCCC--hH---HHHHHHHHHHHHHhhcCCCCcE-
Q 012190 177 KGSPTLLFLPGID-----GLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP--FE---GLVKFVEETVRREHASSPEKPI- 244 (468)
Q Consensus 177 ~~~p~lV~lHG~~-----~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss--~~---~~~~dl~~~i~~~~~~~~~~~i- 244 (468)
+..|..|++|-.+ .+......+...| ..+|.++-+|+||-|+|. ++ .-.+|....++.++.+.+..+.
T Consensus 26 ~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~hp~s~~~ 105 (210)
T COG2945 26 PAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHPDSASC 105 (210)
T ss_pred CCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHHHHHHHHHHHHhhCCCchhh
Confidence 4577788888543 2233455566777 778999999999999993 21 2244556666666666776665
Q ss_pred EEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccC
Q 012190 245 YLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENR 324 (468)
Q Consensus 245 ~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (468)
.|.|+|+||.|++.+|.+.|+. ...+.+.|....
T Consensus 106 ~l~GfSFGa~Ia~~la~r~~e~-~~~is~~p~~~~--------------------------------------------- 139 (210)
T COG2945 106 WLAGFSFGAYIAMQLAMRRPEI-LVFISILPPINA--------------------------------------------- 139 (210)
T ss_pred hhcccchHHHHHHHHHHhcccc-cceeeccCCCCc---------------------------------------------
Confidence 7899999999999999999763 344444432210
Q ss_pred CChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHH
Q 012190 325 LPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNN 404 (468)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~ 404 (468)
+. ...+....+|.++|+|+.|.+++.. ...+..+
T Consensus 140 ----------------------------------~d-----------fs~l~P~P~~~lvi~g~~Ddvv~l~-~~l~~~~ 173 (210)
T COG2945 140 ----------------------------------YD-----------FSFLAPCPSPGLVIQGDADDVVDLV-AVLKWQE 173 (210)
T ss_pred ----------------------------------hh-----------hhhccCCCCCceeEecChhhhhcHH-HHHHhhc
Confidence 00 0123566889999999999999888 5666666
Q ss_pred hCCCcEEEEeCCCCccccccCcHHHHHHHHhcCccc
Q 012190 405 SLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYR 440 (468)
Q Consensus 405 ~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~ 440 (468)
. ...+++++++++||.+- +-..+.+.|. +|+.
T Consensus 174 ~-~~~~~i~i~~a~HFF~g-Kl~~l~~~i~--~~l~ 205 (210)
T COG2945 174 S-IKITVITIPGADHFFHG-KLIELRDTIA--DFLE 205 (210)
T ss_pred C-CCCceEEecCCCceecc-cHHHHHHHHH--HHhh
Confidence 6 46788999999999975 4455666666 5663
No 97
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.17 E-value=1.6e-09 Score=100.36 Aligned_cols=100 Identities=19% Similarity=0.172 Sum_probs=73.4
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC----ChHHHHHHHHHHHHHHhhcC------CCCcEEEE
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT----PFEGLVKFVEETVRREHASS------PEKPIYLV 247 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S----s~~~~~~dl~~~i~~~~~~~------~~~~i~Lv 247 (468)
-|++||+||+......|..+++++ +.||-|+++|+...+.. +.+...+.+..+.+.+...+ ...++.|.
T Consensus 17 yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~ 96 (259)
T PF12740_consen 17 YPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGLESKLPLGVKPDFSKLALA 96 (259)
T ss_pred cCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcchhHHHHHHHHHHHHhcchhhccccccccccceEEe
Confidence 789999999998888899999999 77899999996543332 22222222222222222121 23589999
Q ss_pred EeChhHHHHHHHHHhC-----CCCceEEEEeCCCCC
Q 012190 248 GDSFGGCLALAVAARN-----PTIDLILILSNPATS 278 (468)
Q Consensus 248 GhS~GG~ia~~~a~~~-----P~~v~~lVli~p~~~ 278 (468)
|||-||-+|..++..+ +.+++++|+++|..+
T Consensus 97 GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG 132 (259)
T PF12740_consen 97 GHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDG 132 (259)
T ss_pred eeCCCCHHHHHHHhhhcccccccceeEEEEeccccc
Confidence 9999999999999887 568999999999764
No 98
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.15 E-value=2.3e-09 Score=99.89 Aligned_cols=155 Identities=19% Similarity=0.212 Sum_probs=120.9
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCC-CCC------------------ChHHHHHHHHHHHHHHhhc
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVY-DRT------------------PFEGLVKFVEETVRREHAS 238 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~-G~S------------------s~~~~~~dl~~~i~~~~~~ 238 (468)
.|.||++|+..|-....+...+.| ..||.|+++|+-+. |.+ +..+...|+...++.+...
T Consensus 27 ~P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~ 106 (236)
T COG0412 27 FPGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQ 106 (236)
T ss_pred CCEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhC
Confidence 389999999999999999999999 77899999998652 222 1356778888888887754
Q ss_pred C--CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhH
Q 012190 239 S--PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKM 316 (468)
Q Consensus 239 ~--~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
. ..++|.++|+||||.+++.++.+.| .+++.+..-+.......
T Consensus 107 ~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~~~~~~---------------------------------- 151 (236)
T COG0412 107 PQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGLIADDT---------------------------------- 151 (236)
T ss_pred CCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCCCCCcc----------------------------------
Confidence 3 3567999999999999999999887 78888886553210000
Q ss_pred HHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcH
Q 012190 317 AMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSE 396 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~ 396 (468)
....++++|+|+++|+.|..+|..
T Consensus 152 --------------------------------------------------------~~~~~~~~pvl~~~~~~D~~~p~~ 175 (236)
T COG0412 152 --------------------------------------------------------ADAPKIKVPVLLHLAGEDPYIPAA 175 (236)
T ss_pred --------------------------------------------------------cccccccCcEEEEecccCCCCChh
Confidence 011578999999999999999998
Q ss_pred HHHHHHHHhCC----CcEEEEeCCCCccccccC
Q 012190 397 DEAKRLNNSLQ----NCIVRNFKDNGHTLLLEE 425 (468)
Q Consensus 397 ~~~~~l~~~l~----~~~~~~i~~aGH~~~~e~ 425 (468)
..+.+.+.+. +.++.+++++.|..+-+.
T Consensus 176 -~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~ 207 (236)
T COG0412 176 -DVDALAAALEDAGVKVDLEIYPGAGHGFANDR 207 (236)
T ss_pred -HHHHHHHHHHhcCCCeeEEEeCCCccccccCC
Confidence 6777777663 568899999989988553
No 99
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.15 E-value=3.6e-10 Score=119.88 Aligned_cols=86 Identities=15% Similarity=0.216 Sum_probs=72.4
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhc-CCeEEEEecCCCCCCCC------------------------------hHHHHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLG-KAFEVRCLHIPVYDRTP------------------------------FEGLVK 226 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~-~~~~V~~~D~~G~G~Ss------------------------------~~~~~~ 226 (468)
+.|+|||+||++++...|..+++.|. .+|+|+++|+||||+|. +++.+.
T Consensus 448 g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~ 527 (792)
T TIGR03502 448 GWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSIL 527 (792)
T ss_pred CCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHH
Confidence 35789999999999999999999994 78999999999999882 456677
Q ss_pred HHHHHHHHHh------hc------CCCCcEEEEEeChhHHHHHHHHHhC
Q 012190 227 FVEETVRREH------AS------SPEKPIYLVGDSFGGCLALAVAARN 263 (468)
Q Consensus 227 dl~~~i~~~~------~~------~~~~~i~LvGhS~GG~ia~~~a~~~ 263 (468)
|+..+...+. .. .+..+++++||||||.+++.++...
T Consensus 528 Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 528 DLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred HHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 8887777776 22 3467999999999999999999763
No 100
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.15 E-value=3.7e-09 Score=104.79 Aligned_cols=112 Identities=15% Similarity=0.062 Sum_probs=82.5
Q ss_pred eeeeecCCCCCC-CCCCeEEEeCCCCCchhhH-HHhHhhhcCCeEEEEecCCCCC-------CCChHHHHHHHHHHHHHH
Q 012190 165 RWFCPVDCGRPL-KGSPTLLFLPGIDGLGLGL-ILHHKPLGKAFEVRCLHIPVYD-------RTPFEGLVKFVEETVRRE 235 (468)
Q Consensus 165 ~~~~y~~~g~~~-~~~p~lV~lHG~~~s~~~~-~~~~~~L~~~~~V~~~D~~G~G-------~Ss~~~~~~dl~~~i~~~ 235 (468)
+.++|.+..... ...|+||++..+.+....+ +.+++.|-.++.|+..|+.--+ .=+++|+++.+.++++++
T Consensus 87 ~L~~y~~~~~~~~~~~~pvLiV~Pl~g~~~~L~RS~V~~Ll~g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~ 166 (406)
T TIGR01849 87 RLIHFKRQGFRAELPGPAVLIVAPMSGHYATLLRSTVEALLPDHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFL 166 (406)
T ss_pred EEEEECCCCcccccCCCcEEEEcCCchHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHh
Confidence 345565443211 1136899999888776654 4577888449999999985544 337899999999999874
Q ss_pred hhcCCCCcEEEEEeChhHHHHHHHHHhC-----CCCceEEEEeCCCCCCCC
Q 012190 236 HASSPEKPIYLVGDSFGGCLALAVAARN-----PTIDLILILSNPATSFGR 281 (468)
Q Consensus 236 ~~~~~~~~i~LvGhS~GG~ia~~~a~~~-----P~~v~~lVli~p~~~~~~ 281 (468)
+. +++++|+|+||..++.+++.+ |..++.++++.++..+..
T Consensus 167 ----G~-~v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~ 212 (406)
T TIGR01849 167 ----GP-DIHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARA 212 (406)
T ss_pred ----CC-CCcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCC
Confidence 33 389999999999977766664 677999999998887654
No 101
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.15 E-value=6.5e-10 Score=105.00 Aligned_cols=143 Identities=19% Similarity=0.179 Sum_probs=98.4
Q ss_pred HHHHhhcCCC--cchHHHHHHhccCccCC-CCCCceeeeecCCCCC-CCCCCeEEEeCCCCCchhhHHHhHhhhcC----
Q 012190 133 LEVLWDDGYG--TDSVKDYLDAAKEIIKP-DGGPPRWFCPVDCGRP-LKGSPTLLFLPGIDGLGLGLILHHKPLGK---- 204 (468)
Q Consensus 133 ~~~~~~~~~~--~~~~~~y~~~~~~~~~~-dg~~~~~~~y~~~g~~-~~~~p~lV~lHG~~~s~~~~~~~~~~L~~---- 204 (468)
...+|.+.|. .+..+.++..-..+.+. .|...-++|..+...+ .+.--+++++||++|+-..|..+++.|.+
T Consensus 102 vv~ywr~~y~~~W~e~e~~ln~f~qykTeIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~h 181 (469)
T KOG2565|consen 102 VVEYWRDLYLPKWKEREEFLNQFKQYKTEIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRH 181 (469)
T ss_pred HHHHHHHhhcccHHHHHHHHHhhhhhhhhhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCcccc
Confidence 5567778887 23333455544444433 4555455554433221 12233799999999999999999988832
Q ss_pred ------CeEEEEecCCCCCCCCh----HHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeC
Q 012190 205 ------AFEVRCLHIPVYDRTPF----EGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSN 274 (468)
Q Consensus 205 ------~~~V~~~D~~G~G~Ss~----~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~ 274 (468)
.|+|+|+.+||+|.|+- .--+...+.+++.+-.+++-.++++-|-.||+.|+..+|..+|+.|.|+-+-.
T Consensus 182 g~~~d~~FEVI~PSlPGygwSd~~sk~GFn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm 261 (469)
T KOG2565|consen 182 GNESDYAFEVIAPSLPGYGWSDAPSKTGFNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNM 261 (469)
T ss_pred CCccceeEEEeccCCCCcccCcCCccCCccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhcc
Confidence 38999999999998841 11122334444555555777899999999999999999999999999987744
Q ss_pred C
Q 012190 275 P 275 (468)
Q Consensus 275 p 275 (468)
+
T Consensus 262 ~ 262 (469)
T KOG2565|consen 262 C 262 (469)
T ss_pred c
Confidence 4
No 102
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.13 E-value=2.4e-09 Score=95.51 Aligned_cols=87 Identities=22% Similarity=0.353 Sum_probs=64.0
Q ss_pred EEEeCCCCCchhhHHH--hHhhhc---CCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHH
Q 012190 182 LLFLPGIDGLGLGLIL--HHKPLG---KAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLA 256 (468)
Q Consensus 182 lV~lHG~~~s~~~~~~--~~~~L~---~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia 256 (468)
|+++|||.++....+. +.+.++ ....+.++|++.+ .++..+.+.++++. .....+.|||.||||..|
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~~----p~~a~~~l~~~i~~----~~~~~~~liGSSlGG~~A 73 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPPF----PEEAIAQLEQLIEE----LKPENVVLIGSSLGGFYA 73 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCcC----HHHHHHHHHHHHHh----CCCCCeEEEEEChHHHHH
Confidence 7999999999986654 233443 3467888887744 35566777777776 344458999999999999
Q ss_pred HHHHHhCCCCceEEEEeCCCCCC
Q 012190 257 LAVAARNPTIDLILILSNPATSF 279 (468)
Q Consensus 257 ~~~a~~~P~~v~~lVli~p~~~~ 279 (468)
..+|.+++ +.+ ||++|+..+
T Consensus 74 ~~La~~~~--~~a-vLiNPav~p 93 (187)
T PF05728_consen 74 TYLAERYG--LPA-VLINPAVRP 93 (187)
T ss_pred HHHHHHhC--CCE-EEEcCCCCH
Confidence 99999984 333 999997643
No 103
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.12 E-value=1.3e-09 Score=96.80 Aligned_cols=245 Identities=16% Similarity=0.099 Sum_probs=133.6
Q ss_pred ccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCC----------hHHH
Q 012190 156 IIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTP----------FEGL 224 (468)
Q Consensus 156 ~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss----------~~~~ 224 (468)
+..+||....--++...+. ...-++.-.+.+-....|++++... ..+|+|+++|+||.|.|+ +.|+
T Consensus 10 l~~~DG~~l~~~~~pA~~~---~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~Dw 86 (281)
T COG4757 10 LPAPDGYSLPGQRFPADGK---ASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDW 86 (281)
T ss_pred cccCCCccCccccccCCCC---CCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhh
Confidence 4566766532223322222 1223444455555555777788888 668999999999999983 5666
Q ss_pred H-HHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCch-----hH
Q 012190 225 V-KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPD-----EL 298 (468)
Q Consensus 225 ~-~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~-----~~ 298 (468)
+ .|+...++.++...+..|.+.||||+||.+.-.+. .+| +..+....+..... ..+......+..+.- ..
T Consensus 87 A~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~-~~~-k~~a~~vfG~gagw--sg~m~~~~~l~~~~l~~lv~p~ 162 (281)
T COG4757 87 ARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLG-QHP-KYAAFAVFGSGAGW--SGWMGLRERLGAVLLWNLVGPP 162 (281)
T ss_pred hhcchHHHHHHHHhhCCCCceEEeeccccceeecccc-cCc-ccceeeEecccccc--ccchhhhhcccceeeccccccc
Confidence 6 48888888888777888999999999999866444 444 44444444433321 111111000000000 00
Q ss_pred HhhHH-HHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhccc
Q 012190 299 HCAVP-YLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHA 377 (468)
Q Consensus 299 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~ 377 (468)
-..++ .+-..+.+.. ..+ .....+++..+.+. +...+.. -......+..+.
T Consensus 163 lt~w~g~~p~~l~G~G---------~d~-----p~~v~RdW~RwcR~--------p~y~fdd------p~~~~~~q~yaa 214 (281)
T COG4757 163 LTFWKGYMPKDLLGLG---------SDL-----PGTVMRDWARWCRH--------PRYYFDD------PAMRNYRQVYAA 214 (281)
T ss_pred hhhccccCcHhhcCCC---------ccC-----cchHHHHHHHHhcC--------ccccccC------hhHhHHHHHHHH
Confidence 00000 0001111111 111 11111111111000 0000000 000111345588
Q ss_pred CCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEE--eCC----CCccccccCc-HHHHHHHHhc
Q 012190 378 VKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRN--FKD----NGHTLLLEEG-ISLLTIIKGT 436 (468)
Q Consensus 378 i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~--i~~----aGH~~~~e~p-~~~~~~I~~~ 436 (468)
+.+|++.+...+|+.+|+. ..+.+.+..+++.+.. ++. -||+-..-+| |.+-+.+.+|
T Consensus 215 VrtPi~~~~~~DD~w~P~A-s~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w 279 (281)
T COG4757 215 VRTPITFSRALDDPWAPPA-SRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGW 279 (281)
T ss_pred hcCceeeeccCCCCcCCHH-HHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHh
Confidence 9999999999999999999 6999999888775443 443 5999988887 6666666543
No 104
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.10 E-value=7.1e-09 Score=93.02 Aligned_cols=235 Identities=15% Similarity=0.130 Sum_probs=116.3
Q ss_pred CCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCC-CCC-------ChHHHHHHHHHHHHHHhhcCCCCcEEEE
Q 012190 177 KGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVY-DRT-------PFEGLVKFVEETVRREHASSPEKPIYLV 247 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~-G~S-------s~~~~~~dl~~~i~~~~~~~~~~~i~Lv 247 (468)
+..++||+.+||+-....|..++.+| ..||+|+-||--.| |.| ++....+++..+++.+.. .+..++.|+
T Consensus 28 ~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftms~g~~sL~~V~dwl~~-~g~~~~GLI 106 (294)
T PF02273_consen 28 KRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTMSIGKASLLTVIDWLAT-RGIRRIGLI 106 (294)
T ss_dssp --S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B-------------HHHHHHHHHHHHHHHHH-TT---EEEE
T ss_pred ccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCChhhcchHHhHHHHHHHHHHHHh-cCCCcchhh
Confidence 45689999999999999999999999 78999999998766 666 477888889988888884 466789999
Q ss_pred EeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCCh
Q 012190 248 GDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPP 327 (468)
Q Consensus 248 GhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (468)
.-|+.|-+|+..|++- .+.-+|.+-+.... ...++..... . +.+.+
T Consensus 107 AaSLSaRIAy~Va~~i--~lsfLitaVGVVnl--------r~TLe~al~~--D--------yl~~~-------------- 152 (294)
T PF02273_consen 107 AASLSARIAYEVAADI--NLSFLITAVGVVNL--------RDTLEKALGY--D--------YLQLP-------------- 152 (294)
T ss_dssp EETTHHHHHHHHTTTS----SEEEEES--S-H--------HHHHHHHHSS-----------GGGS---------------
T ss_pred hhhhhHHHHHHHhhcc--CcceEEEEeeeeeH--------HHHHHHHhcc--c--------hhhcc--------------
Confidence 9999999999999964 46667776543211 1111110000 0 00000
Q ss_pred hHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHh---HHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHH
Q 012190 328 RIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSAS---AYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNN 404 (468)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~ 404 (468)
.+++-..+. . ....-+...+..+.+...- ......+..+.+|++.+++++|.++... +...+..
T Consensus 153 ---i~~lp~dld-------f--eGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~-eV~~~~~ 219 (294)
T PF02273_consen 153 ---IEQLPEDLD-------F--EGHNLGAEVFVTDCFEHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQS-EVEELLD 219 (294)
T ss_dssp ---GGG--SEEE-------E--TTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HH-HHHHHHT
T ss_pred ---hhhCCCccc-------c--cccccchHHHHHHHHHcCCccchhHHHHHhhCCCCEEEEEeCCCccccHH-HHHHHHH
Confidence 000000000 0 0011112222222222111 1113455788999999999999999998 6888887
Q ss_pred hCC--CcEEEEeCCCCccccccCcHHHH---HHHHhcCcccccCCCCCCCCCCCCCHHHHH
Q 012190 405 SLQ--NCIVRNFKDNGHTLLLEEGISLL---TIIKGTCKYRRSRKLDSVADFLPPSRQEFK 460 (468)
Q Consensus 405 ~l~--~~~~~~i~~aGH~~~~e~p~~~~---~~I~~~~F~~r~~~~~~v~~~~~~~~~~~~ 460 (468)
.+. .++++.++|++|.+- |++.... +.+.+...--.....|...+++.|+.+.+-
T Consensus 220 ~~~s~~~klysl~Gs~HdL~-enl~vlrnfy~svtkaaiald~~~~~l~~~~~ep~fe~lt 279 (294)
T PF02273_consen 220 NINSNKCKLYSLPGSSHDLG-ENLVVLRNFYQSVTKAAIALDSGSLDLDIDIIEPTFEDLT 279 (294)
T ss_dssp T-TT--EEEEEETT-SS-TT-SSHHHHHHHHHHHHHHHHHHHTT------------HHHHH
T ss_pred hcCCCceeEEEecCccchhh-hChHHHHHHHHHHHHHHHhhcCCceeeeccccCCCHHHHH
Confidence 554 789999999999985 4443322 222222222234446888899999988753
No 105
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.10 E-value=2.9e-09 Score=91.16 Aligned_cols=155 Identities=18% Similarity=0.188 Sum_probs=108.2
Q ss_pred CeEEEeCCCCCchh-hHHHhH-hhhcCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHH
Q 012190 180 PTLLFLPGIDGLGL-GLILHH-KPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLAL 257 (468)
Q Consensus 180 p~lV~lHG~~~s~~-~~~~~~-~~L~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~ 257 (468)
+.+|++||+.+|+. .|.... ..|. .+..++++--..-..++|++.+...+... .++++||+||+|+..++
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we~~l~---~a~rveq~~w~~P~~~dWi~~l~~~v~a~-----~~~~vlVAHSLGc~~v~ 74 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWESALP---NARRVEQDDWEAPVLDDWIARLEKEVNAA-----EGPVVLVAHSLGCATVA 74 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHHhhCc---cchhcccCCCCCCCHHHHHHHHHHHHhcc-----CCCeEEEEecccHHHHH
Confidence 46899999988875 454433 2222 24445555555557888888888888762 45799999999999999
Q ss_pred HHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhh
Q 012190 258 AVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNN 337 (468)
Q Consensus 258 ~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (468)
.++.+....|.|++|++|+..-....... ....
T Consensus 75 h~~~~~~~~V~GalLVAppd~~~~~~~~~-----------------------------------------------~~~t 107 (181)
T COG3545 75 HWAEHIQRQVAGALLVAPPDVSRPEIRPK-----------------------------------------------HLMT 107 (181)
T ss_pred HHHHhhhhccceEEEecCCCccccccchh-----------------------------------------------hccc
Confidence 99999878999999999854221100000 0000
Q ss_pred cchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCC
Q 012190 338 LPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDN 417 (468)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~a 417 (468)
+. ........-|.+++++.+|++++++ .++.+++.. ++.++.+.++
T Consensus 108 --------------f~------------------~~p~~~lpfps~vvaSrnDp~~~~~-~a~~~a~~w-gs~lv~~g~~ 153 (181)
T COG3545 108 --------------FD------------------PIPREPLPFPSVVVASRNDPYVSYE-HAEDLANAW-GSALVDVGEG 153 (181)
T ss_pred --------------cC------------------CCccccCCCceeEEEecCCCCCCHH-HHHHHHHhc-cHhheecccc
Confidence 00 0112455679999999999999999 799999888 5777888888
Q ss_pred Cccccc
Q 012190 418 GHTLLL 423 (468)
Q Consensus 418 GH~~~~ 423 (468)
||+--.
T Consensus 154 GHiN~~ 159 (181)
T COG3545 154 GHINAE 159 (181)
T ss_pred cccchh
Confidence 997543
No 106
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.06 E-value=7e-09 Score=120.54 Aligned_cols=96 Identities=23% Similarity=0.318 Sum_probs=84.0
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-----ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhH
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGG 253 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-----s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG 253 (468)
+|+++|+||++++...|..+.+.|..++.|++++.||+|.. +++++++++.+.++... +..+++++||||||
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~~l~~~~~v~~~~~~g~~~~~~~~~~l~~la~~~~~~i~~~~---~~~p~~l~G~S~Gg 1144 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSRYLDPQWSIYGIQSPRPDGPMQTATSLDEVCEAHLATLLEQQ---PHGPYHLLGYSLGG 1144 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHHhcCCCCcEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHhhC---CCCCEEEEEechhh
Confidence 57899999999999999999999988999999999999865 68899999888887642 34589999999999
Q ss_pred HHHHHHHHh---CCCCceEEEEeCCCC
Q 012190 254 CLALAVAAR---NPTIDLILILSNPAT 277 (468)
Q Consensus 254 ~ia~~~a~~---~P~~v~~lVli~p~~ 277 (468)
.+|..+|.+ .++.+..++++++..
T Consensus 1145 ~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1145 TLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred HHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 999999986 578899999998743
No 107
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.04 E-value=2.2e-09 Score=106.14 Aligned_cols=125 Identities=14% Similarity=0.098 Sum_probs=97.7
Q ss_pred HhccCccCCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhH-----h-hh-cCCeEEEEecCCCCCCC----
Q 012190 151 DAAKEIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHH-----K-PL-GKAFEVRCLHIPVYDRT---- 219 (468)
Q Consensus 151 ~~~~~~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~-----~-~L-~~~~~V~~~D~~G~G~S---- 219 (468)
.|...+.+.||-.+.+.+....+ .++|+|++.||+.+++..|.... . .| ..||+|+.-..||.--|
T Consensus 48 ~E~h~V~T~DgYiL~lhRIp~~~---~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~ 124 (403)
T KOG2624|consen 48 VEEHEVTTEDGYILTLHRIPRGK---KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHK 124 (403)
T ss_pred eEEEEEEccCCeEEEEeeecCCC---CCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhc
Confidence 45567788999876666554443 35899999999999999887543 2 22 56899999999996544
Q ss_pred -------------ChHHHH-HHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCC---CceEEEEeCCCCC
Q 012190 220 -------------PFEGLV-KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPT---IDLILILSNPATS 278 (468)
Q Consensus 220 -------------s~~~~~-~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~---~v~~lVli~p~~~ 278 (468)
++++++ -|+-+.|+.+....+.++++.+|||.|+.....+++..|+ +|+.+++++|+..
T Consensus 125 ~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~ 200 (403)
T KOG2624|consen 125 KLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAF 200 (403)
T ss_pred ccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhh
Confidence 366654 4788888887777778899999999999999988888875 7999999999873
No 108
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.02 E-value=3.7e-09 Score=96.17 Aligned_cols=191 Identities=16% Similarity=0.092 Sum_probs=120.3
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC----------------------------hHHHHHHHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP----------------------------FEGLVKFVE 229 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss----------------------------~~~~~~dl~ 229 (468)
.-|.||-.||+++++..|......=..+|.|+.+|-||.|.|+ +.....|+.
T Consensus 82 ~~P~vV~fhGY~g~~g~~~~~l~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~ 161 (321)
T COG3458 82 KLPAVVQFHGYGGRGGEWHDMLHWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAV 161 (321)
T ss_pred ccceEEEEeeccCCCCCccccccccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHH
Confidence 3789999999999999887777666889999999999999761 122333444
Q ss_pred HHHHHHhh--cCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhh
Q 012190 230 ETVRREHA--SSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLS 307 (468)
Q Consensus 230 ~~i~~~~~--~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (468)
.+++.+.. ....++|.+.|.|.||.+++.+|+.. .++++++++-|..+.-...+ +......+..+...+.
T Consensus 162 ~ave~~~sl~~vde~Ri~v~G~SqGGglalaaaal~-~rik~~~~~~Pfl~df~r~i-------~~~~~~~ydei~~y~k 233 (321)
T COG3458 162 RAVEILASLDEVDEERIGVTGGSQGGGLALAAAALD-PRIKAVVADYPFLSDFPRAI-------ELATEGPYDEIQTYFK 233 (321)
T ss_pred HHHHHHhccCccchhheEEeccccCchhhhhhhhcC-hhhhcccccccccccchhhe-------eecccCcHHHHHHHHH
Confidence 44443332 12467899999999999999888887 47999998877553311111 1100000101111000
Q ss_pred hhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEe
Q 012190 308 YVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLAS 387 (468)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G 387 (468)
.. .+. .++.. ..+...+. ....+++++|+|+..|
T Consensus 234 ~h----------------~~~--e~~v~--------------------------~TL~yfD~--~n~A~RiK~pvL~svg 267 (321)
T COG3458 234 RH----------------DPK--EAEVF--------------------------ETLSYFDI--VNLAARIKVPVLMSVG 267 (321)
T ss_pred hc----------------Cch--HHHHH--------------------------HHHhhhhh--hhHHHhhccceEEeec
Confidence 00 000 01111 11111111 1233789999999999
Q ss_pred CCCCCCCcHHHHHHHHHhCC-CcEEEEeCCCCccccc
Q 012190 388 GKDNMLPSEDEAKRLNNSLQ-NCIVRNFKDNGHTLLL 423 (468)
Q Consensus 388 ~~D~~v~~~~~~~~l~~~l~-~~~~~~i~~aGH~~~~ 423 (468)
-.|+++||. ..-.+++.++ .+++.+++.-+|.-.-
T Consensus 268 L~D~vcpPs-tqFA~yN~l~~~K~i~iy~~~aHe~~p 303 (321)
T COG3458 268 LMDPVCPPS-TQFAAYNALTTSKTIEIYPYFAHEGGP 303 (321)
T ss_pred ccCCCCCCh-hhHHHhhcccCCceEEEeeccccccCc
Confidence 999999999 6878888886 5677888877776543
No 109
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.01 E-value=1.9e-09 Score=99.04 Aligned_cols=98 Identities=24% Similarity=0.298 Sum_probs=72.2
Q ss_pred EEEeCCCCCc---hhhHHHhHhhh-c-CCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhc-----CCCCcEEEEEeCh
Q 012190 182 LLFLPGIDGL---GLGLILHHKPL-G-KAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHAS-----SPEKPIYLVGDSF 251 (468)
Q Consensus 182 lV~lHG~~~s---~~~~~~~~~~L-~-~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~-----~~~~~i~LvGhS~ 251 (468)
||++||.+.. .......+..+ . .++.|+++|+|=..+.++.+..+|+.+.++.+... ....+|+|+|+|.
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SA 80 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAPFPAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSA 80 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSSTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETH
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccccccccccccccceeeeccccccccccccceEEeeccc
Confidence 6899998644 33445556666 2 68999999999888888888888888888887765 4567999999999
Q ss_pred hHHHHHHHHHhCCC----CceEEEEeCCCCCC
Q 012190 252 GGCLALAVAARNPT----IDLILILSNPATSF 279 (468)
Q Consensus 252 GG~ia~~~a~~~P~----~v~~lVli~p~~~~ 279 (468)
||.+|+.++.+..+ .++++++++|....
T Consensus 81 Gg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 81 GGHLALSLALRARDRGLPKPKGIILISPWTDL 112 (211)
T ss_dssp HHHHHHHHHHHHHHTTTCHESEEEEESCHSST
T ss_pred ccchhhhhhhhhhhhcccchhhhhcccccccc
Confidence 99999999975432 48999999996544
No 110
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.98 E-value=4.7e-09 Score=97.03 Aligned_cols=100 Identities=17% Similarity=0.202 Sum_probs=73.3
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh---------cCCeEEEEecCCCCCC----CChHHHHHHHHHHHHHHhhcC-----
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL---------GKAFEVRCLHIPVYDR----TPFEGLVKFVEETVRREHASS----- 239 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L---------~~~~~V~~~D~~G~G~----Ss~~~~~~dl~~~i~~~~~~~----- 239 (468)
++.+|||+||..|+...++.+...+ ...++++++|+..... ..+.+..+.+.+.++.+....
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~~~~ 82 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKSNRP 82 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhhccC
Confidence 4678999999999999887776555 1258899999876431 245555555555555554333
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCC---CCceEEEEeCCCC
Q 012190 240 PEKPIYLVGDSFGGCLALAVAARNP---TIDLILILSNPAT 277 (468)
Q Consensus 240 ~~~~i~LvGhS~GG~ia~~~a~~~P---~~v~~lVli~p~~ 277 (468)
+.++|+||||||||.+|-.++...+ +.|+.+|.++.+.
T Consensus 83 ~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 83 PPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPH 123 (225)
T ss_pred CCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCC
Confidence 6789999999999999987776543 5799999988755
No 111
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=98.98 E-value=5e-08 Score=89.16 Aligned_cols=110 Identities=20% Similarity=0.173 Sum_probs=71.5
Q ss_pred eecCCCCCCCCCCeEEEeCCCCCchhhHHHh--Hhhh--cCCeEEEEecCCCC--CCCC----------hHHHHHHHHHH
Q 012190 168 CPVDCGRPLKGSPTLLFLPGIDGLGLGLILH--HKPL--GKAFEVRCLHIPVY--DRTP----------FEGLVKFVEET 231 (468)
Q Consensus 168 ~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~--~~~L--~~~~~V~~~D~~G~--G~Ss----------~~~~~~dl~~~ 231 (468)
-|.+.+.+..+.|.||++||.+++...+... ...| ..+|-|+.++.... .... -.+-+..|..+
T Consensus 5 lYvP~~~~~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~l 84 (220)
T PF10503_consen 5 LYVPPGAPRGPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAAL 84 (220)
T ss_pred EecCCCCCCCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHH
Confidence 4455554333578999999999999987653 3455 34577777764311 0000 01112233344
Q ss_pred HHHHhhc--CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 232 VRREHAS--SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 232 i~~~~~~--~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
++++... ....+|++.|+|.||+.+..++..+|+.+.++...++..
T Consensus 85 v~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~ 132 (220)
T PF10503_consen 85 VDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVP 132 (220)
T ss_pred HHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccc
Confidence 4433322 235699999999999999999999999999988876643
No 112
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.93 E-value=1.1e-07 Score=97.37 Aligned_cols=103 Identities=20% Similarity=0.157 Sum_probs=75.9
Q ss_pred CCCCeEEEeCCCCCchhhHHHhH------------------hhhcCCeEEEEecCC-CCCCC---------ChHHHHHHH
Q 012190 177 KGSPTLLFLPGIDGLGLGLILHH------------------KPLGKAFEVRCLHIP-VYDRT---------PFEGLVKFV 228 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~~~------------------~~L~~~~~V~~~D~~-G~G~S---------s~~~~~~dl 228 (468)
++.|++|+++|.+|+...+..+. -.+.+..+++.+|.| |+|.| +.++.++|+
T Consensus 75 ~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~ 154 (462)
T PTZ00472 75 PEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYADKADYDHNESEVSEDM 154 (462)
T ss_pred CCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccCCCCCCCCChHHHHHHH
Confidence 56899999999999887542221 012345789999986 78776 246788888
Q ss_pred HHHHHHHhhcCC---CCcEEEEEeChhHHHHHHHHHhC----------CCCceEEEEeCCCCCC
Q 012190 229 EETVRREHASSP---EKPIYLVGDSFGGCLALAVAARN----------PTIDLILILSNPATSF 279 (468)
Q Consensus 229 ~~~i~~~~~~~~---~~~i~LvGhS~GG~ia~~~a~~~----------P~~v~~lVli~p~~~~ 279 (468)
.++++......+ ..+++|+|||+||.++..+|.+- +-.++|+++-++....
T Consensus 155 ~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp 218 (462)
T PTZ00472 155 YNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDP 218 (462)
T ss_pred HHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccCh
Confidence 888887654444 48999999999999998888652 1247899998887644
No 113
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.88 E-value=1.1e-07 Score=79.74 Aligned_cols=153 Identities=18% Similarity=0.155 Sum_probs=106.2
Q ss_pred CCeEEEeCCCCCchh--hHHHhHhhh-cCCeEEEEecCCCC-----CCC-------C-hHHHHHHHHHHHHHHhhcCCCC
Q 012190 179 SPTLLFLPGIDGLGL--GLILHHKPL-GKAFEVRCLHIPVY-----DRT-------P-FEGLVKFVEETVRREHASSPEK 242 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~--~~~~~~~~L-~~~~~V~~~D~~G~-----G~S-------s-~~~~~~dl~~~i~~~~~~~~~~ 242 (468)
.-+||+.||.+++.+ .+...+..| ..++.|.-|++|-. |+- + ...+...+.++-.. ....
T Consensus 14 ~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~----l~~g 89 (213)
T COG3571 14 PVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAG----LAEG 89 (213)
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhc----ccCC
Confidence 337899999998877 566677888 67899999987643 211 1 34444444444433 5556
Q ss_pred cEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhc
Q 012190 243 PIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIE 322 (468)
Q Consensus 243 ~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (468)
|.++-|+||||-++..+|......|+++++++=++..+-.+
T Consensus 90 pLi~GGkSmGGR~aSmvade~~A~i~~L~clgYPfhppGKP--------------------------------------- 130 (213)
T COG3571 90 PLIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFHPPGKP--------------------------------------- 130 (213)
T ss_pred ceeeccccccchHHHHHHHhhcCCcceEEEecCccCCCCCc---------------------------------------
Confidence 89999999999999988887666799999976333211100
Q ss_pred cCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHH
Q 012190 323 NRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRL 402 (468)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l 402 (468)
+ .+. .+.|..+++|+|+.+|+.|.+-..+ +...
T Consensus 131 ---------e-----------------------~~R-------------t~HL~gl~tPtli~qGtrD~fGtr~-~Va~- 163 (213)
T COG3571 131 ---------E-----------------------QLR-------------TEHLTGLKTPTLITQGTRDEFGTRD-EVAG- 163 (213)
T ss_pred ---------c-----------------------cch-------------hhhccCCCCCeEEeecccccccCHH-HHHh-
Confidence 0 000 2467889999999999999998777 3422
Q ss_pred HHhCCCcEEEEeCCCCccc
Q 012190 403 NNSLQNCIVRNFKDNGHTL 421 (468)
Q Consensus 403 ~~~l~~~~~~~i~~aGH~~ 421 (468)
+...+..+++.+.++.|.+
T Consensus 164 y~ls~~iev~wl~~adHDL 182 (213)
T COG3571 164 YALSDPIEVVWLEDADHDL 182 (213)
T ss_pred hhcCCceEEEEeccCcccc
Confidence 2233578999999999986
No 114
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.88 E-value=4.3e-08 Score=95.12 Aligned_cols=237 Identities=16% Similarity=0.114 Sum_probs=135.6
Q ss_pred CCCeEEEeCCCCCchhhHH-----HhHhhh-cCCeEEEEecCCCCCCC----ChHHHH-HHHHHHHHHHhhcCCCCcEEE
Q 012190 178 GSPTLLFLPGIDGLGLGLI-----LHHKPL-GKAFEVRCLHIPVYDRT----PFEGLV-KFVEETVRREHASSPEKPIYL 246 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~-----~~~~~L-~~~~~V~~~D~~G~G~S----s~~~~~-~dl~~~i~~~~~~~~~~~i~L 246 (468)
-+++++++|-+-.....+. .++..| .+++.|+.+++++-+.+ .++|+. +.+.+.++......+.++|.+
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg~~~Inl 185 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITGQKDINL 185 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhCccccce
Confidence 3567888898766655432 345555 78999999999865544 688887 888888888877777789999
Q ss_pred EEeChhHHHHHHHHHhCCCC-ceEEEEeCCCCCCCCCCcCcch---HHHhhCchhHH-------hhHHHHhhhhcCChhh
Q 012190 247 VGDSFGGCLALAVAARNPTI-DLILILSNPATSFGRSQLQPLF---PILKAMPDELH-------CAVPYLLSYVMGDPIK 315 (468)
Q Consensus 247 vGhS~GG~ia~~~a~~~P~~-v~~lVli~p~~~~~~~~~~~~~---~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 315 (468)
+|||.||.++..+++.++.+ |+.++++.+...+......... ..+..+..... ......+..+..+.+.
T Consensus 186 iGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~mLrpndli 265 (445)
T COG3243 186 IGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMAIVFFLLRPNDLI 265 (445)
T ss_pred eeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHHHHHHhcCccccc
Confidence 99999999999999998887 9999998776655443211111 11111111000 0011111112111111
Q ss_pred HH--HHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHH---------HhhhcccCCceEEE
Q 012190 316 MA--MVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAY---------ANSRLHAVKAEVLV 384 (468)
Q Consensus 316 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---------~~~~l~~i~~PvLl 384 (468)
+. ...+..+..+.. .+-..... -.-.++.....+.++.+...... ..-.|..|+||++.
T Consensus 266 w~~fV~nyl~ge~pl~-fdllyWn~---------dst~~~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~~It~pvy~ 335 (445)
T COG3243 266 WNYFVNNYLDGEQPLP-FDLLYWNA---------DSTRLPGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGDITCPVYN 335 (445)
T ss_pred hHHHHHHhcCCCCCCc-hhHHHhhC---------CCccCchHHHHHHHHHHHHhChhhccceEECCEEechhhcccceEE
Confidence 11 001111111100 00000000 00112222333333221111110 12356789999999
Q ss_pred EEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccC
Q 012190 385 LASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEE 425 (468)
Q Consensus 385 I~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~ 425 (468)
+.|+.|.++|.. ......+.+++-...+.-++||....=.
T Consensus 336 ~a~~~DhI~P~~-Sv~~g~~l~~g~~~f~l~~sGHIa~vVN 375 (445)
T COG3243 336 LAAEEDHIAPWS-SVYLGARLLGGEVTFVLSRSGHIAGVVN 375 (445)
T ss_pred EeecccccCCHH-HHHHHHHhcCCceEEEEecCceEEEEeC
Confidence 999999999999 5888888888743344445899866544
No 115
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.88 E-value=1.4e-08 Score=93.21 Aligned_cols=156 Identities=16% Similarity=0.159 Sum_probs=85.5
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh----cC-CeEEEEecCCC-----CCC-----------------------------
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL----GK-AFEVRCLHIPV-----YDR----------------------------- 218 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L----~~-~~~V~~~D~~G-----~G~----------------------------- 218 (468)
.++-||||||++.++..|......| .+ .++.+.+|-|- -|-
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 3678999999999999988765444 55 78888777431 110
Q ss_pred -CChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhC--------CCCceEEEEeCCCCCCCCCCcCcchH
Q 012190 219 -TPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARN--------PTIDLILILSNPATSFGRSQLQPLFP 289 (468)
Q Consensus 219 -Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~--------P~~v~~lVli~p~~~~~~~~~~~~~~ 289 (468)
..+++..+.+.+.++..+ + =..|+|+|.||.+|..++... ...++-+|++++.......
T Consensus 83 ~~~~~~sl~~l~~~i~~~G---P--fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~------- 150 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENG---P--FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD------- 150 (212)
T ss_dssp G---HHHHHHHHHHHHHH--------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE--------
T ss_pred ccCHHHHHHHHHHHHHhcC---C--eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh-------
Confidence 014455555555555532 1 246999999999998888542 2246778887764321000
Q ss_pred HHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhH
Q 012190 290 ILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASA 369 (468)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 369 (468)
. .+. +
T Consensus 151 ------------~----------------------------~~~------------------~----------------- 155 (212)
T PF03959_consen 151 ------------Y----------------------------QEL------------------Y----------------- 155 (212)
T ss_dssp ------------G----------------------------TTT------------------T-----------------
T ss_pred ------------h----------------------------hhh------------------h-----------------
Confidence 0 000 0
Q ss_pred HHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCC-cEEEEeCCCCccccccCc
Q 012190 370 YANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQN-CIVRNFKDNGHTLLLEEG 426 (468)
Q Consensus 370 ~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~-~~~~~i~~aGH~~~~e~p 426 (468)
.-..+++|+|-|+|++|.+++++ ..+.+.+.+.+ .+++..+ +||.+....+
T Consensus 156 ----~~~~i~iPtlHv~G~~D~~~~~~-~s~~L~~~~~~~~~v~~h~-gGH~vP~~~~ 207 (212)
T PF03959_consen 156 ----DEPKISIPTLHVIGENDPVVPPE-RSEALAEMFDPDARVIEHD-GGHHVPRKKE 207 (212)
T ss_dssp ------TT---EEEEEEETT-SSS-HH-HHHHHHHHHHHHEEEEEES-SSSS----HH
T ss_pred ----ccccCCCCeEEEEeCCCCCcchH-HHHHHHHhccCCcEEEEEC-CCCcCcCChh
Confidence 01567999999999999999998 68999998877 7878787 5999876543
No 116
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.85 E-value=1.5e-07 Score=90.19 Aligned_cols=232 Identities=16% Similarity=0.154 Sum_probs=127.2
Q ss_pred CCCeEEEeCCCCCchhhHHHh--Hhhh-cCCeEEEEecCCCCCCC--------C---h-------HHHHHHHHHHHHHHh
Q 012190 178 GSPTLLFLPGIDGLGLGLILH--HKPL-GKAFEVRCLHIPVYDRT--------P---F-------EGLVKFVEETVRREH 236 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~--~~~L-~~~~~V~~~D~~G~G~S--------s---~-------~~~~~dl~~~i~~~~ 236 (468)
.+|.+|.++|.|......+.. +..| .+++..+.+..|-||.- . . ...+.+...++..+.
T Consensus 91 ~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~ 170 (348)
T PF09752_consen 91 YRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWLE 170 (348)
T ss_pred CCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHHH
Confidence 488999999999977655442 4555 66899999999999843 1 1 223344445555555
Q ss_pred hcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhH
Q 012190 237 ASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKM 316 (468)
Q Consensus 237 ~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (468)
.+ +..++.+.|.||||.+|...|+..|..+..+-++++..... .+ ....+..... |..+...+ .+....
T Consensus 171 ~~-G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~--vF--t~Gvls~~i~-----W~~L~~q~-~~~~~~ 239 (348)
T PF09752_consen 171 RE-GYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASV--VF--TEGVLSNSIN-----WDALEKQF-EDTVYE 239 (348)
T ss_pred hc-CCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCc--ch--hhhhhhcCCC-----HHHHHHHh-cccchh
Confidence 45 66699999999999999999999999877666666544210 00 0001110000 11111110 000000
Q ss_pred HHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcH
Q 012190 317 AMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSE 396 (468)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~ 396 (468)
................ .........+.+......+.......+-....-.-.+.++.+++|.++|..
T Consensus 240 ---~~~~~~~~~~~~~~~~----------~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~~DaYVPr~ 306 (348)
T PF09752_consen 240 ---EEISDIPAQNKSLPLD----------SMEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAKNDAYVPRH 306 (348)
T ss_pred ---hhhcccccCcccccch----------hhccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEecCceEechh
Confidence 0000000000000000 000000111122111111111111101111222345889999999999998
Q ss_pred HHHHHHHHhCCCcEEEEeCCCCcc-ccccCcHHHHHHHHh
Q 012190 397 DEAKRLNNSLQNCIVRNFKDNGHT-LLLEEGISLLTIIKG 435 (468)
Q Consensus 397 ~~~~~l~~~l~~~~~~~i~~aGH~-~~~e~p~~~~~~I~~ 435 (468)
....+.+..|++++..+++ ||. .++-+.+.+.++|.+
T Consensus 307 -~v~~Lq~~WPGsEvR~l~g-GHVsA~L~~q~~fR~AI~D 344 (348)
T PF09752_consen 307 -GVLSLQEIWPGSEVRYLPG-GHVSAYLLHQEAFRQAIYD 344 (348)
T ss_pred -hcchHHHhCCCCeEEEecC-CcEEEeeechHHHHHHHHH
Confidence 6889999999999999986 997 455677888888874
No 117
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.85 E-value=1.8e-08 Score=100.24 Aligned_cols=99 Identities=20% Similarity=0.179 Sum_probs=59.7
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC-------------C-----------------------
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------------P----------------------- 220 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S-------------s----------------------- 220 (468)
.-|+|||-||++++...|..++..| +.||-|+++|+|..-.. +
T Consensus 99 ~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (379)
T PF03403_consen 99 KFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEF 178 (379)
T ss_dssp -EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHH
T ss_pred CCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHH
Confidence 4789999999999999999999999 88999999999854211 0
Q ss_pred ------hHHHHHHHHHHHHHHhh----------------------cCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEE
Q 012190 221 ------FEGLVKFVEETVRREHA----------------------SSPEKPIYLVGDSFGGCLALAVAARNPTIDLILIL 272 (468)
Q Consensus 221 ------~~~~~~dl~~~i~~~~~----------------------~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVl 272 (468)
++.-+.++..+++.+.. ++...+|.++|||+||+.++..+.+. .++++.|+
T Consensus 179 ~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~ 257 (379)
T PF03403_consen 179 ELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGIL 257 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEEE
Confidence 11123334444433321 01124699999999999999888776 77999999
Q ss_pred eCCCC
Q 012190 273 SNPAT 277 (468)
Q Consensus 273 i~p~~ 277 (468)
++|+.
T Consensus 258 LD~W~ 262 (379)
T PF03403_consen 258 LDPWM 262 (379)
T ss_dssp ES---
T ss_pred eCCcc
Confidence 98853
No 118
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.85 E-value=9e-09 Score=78.27 Aligned_cols=56 Identities=11% Similarity=0.128 Sum_probs=50.6
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC--------ChHHHHHHHHHHHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVR 233 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~ 233 (468)
.+.+|+++||++.+...|..+++.| .++|.|+++|+||||+| +++++++|+..+++
T Consensus 15 ~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 15 PKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred CCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHhC
Confidence 3679999999999999999999999 77899999999999999 48899999888763
No 119
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.85 E-value=9.9e-09 Score=94.24 Aligned_cols=49 Identities=20% Similarity=0.453 Sum_probs=31.0
Q ss_pred hcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC------CcEEEEeCCCCcccc
Q 012190 374 RLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ------NCIVRNFKDNGHTLL 422 (468)
Q Consensus 374 ~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~------~~~~~~i~~aGH~~~ 422 (468)
.+.++++|+|+|.|++|.+.|....++.+.+++. +.+++.++++||++.
T Consensus 110 pvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i~ 164 (213)
T PF08840_consen 110 PVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLIE 164 (213)
T ss_dssp -GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S---
T ss_pred cHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCceec
Confidence 4578899999999999999998855656655542 468888999999974
No 120
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.81 E-value=1.3e-07 Score=90.62 Aligned_cols=104 Identities=15% Similarity=0.075 Sum_probs=75.6
Q ss_pred CCCeEEEeCCCCCchh---hHHHhHh--------hhcCCeEEEEecCCCCCCCC------hHHHHHHHHHHHHHHhhcC-
Q 012190 178 GSPTLLFLPGIDGLGL---GLILHHK--------PLGKAFEVRCLHIPVYDRTP------FEGLVKFVEETVRREHASS- 239 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~---~~~~~~~--------~L~~~~~V~~~D~~G~G~Ss------~~~~~~dl~~~i~~~~~~~- 239 (468)
.-|+||..|+++.... ....... ...++|.|+..|.||.|.|+ ...-++|..++|+.+..+.
T Consensus 19 ~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~~~~e~~D~~d~I~W~~~Qpw 98 (272)
T PF02129_consen 19 PFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPMSPNEAQDGYDTIEWIAAQPW 98 (272)
T ss_dssp SEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TTSHHHHHHHHHHHHHHHHCTT
T ss_pred cccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccCChhHHHHHHHHHHHHHhCCC
Confidence 4789999999997541 1111111 33789999999999999993 5567778888887776541
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCC
Q 012190 240 PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGR 281 (468)
Q Consensus 240 ~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~ 281 (468)
.+.+|.++|.|++|..++.+|+..|..+++++...+......
T Consensus 99 s~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 99 SNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp EEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCC
T ss_pred CCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccc
Confidence 245899999999999999999989999999999887665544
No 121
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.78 E-value=2.4e-07 Score=90.54 Aligned_cols=105 Identities=22% Similarity=0.197 Sum_probs=76.7
Q ss_pred CCCCeEEEeCCCCCchh---hHHHhHhhh--cCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhc-----CCCCcEEE
Q 012190 177 KGSPTLLFLPGIDGLGL---GLILHHKPL--GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHAS-----SPEKPIYL 246 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~~---~~~~~~~~L--~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~-----~~~~~i~L 246 (468)
...|+||++||.+-... .....+..+ ..++.|+.+|+|-.-+-.+....+|+.+.++.+... ...++|.+
T Consensus 77 ~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v 156 (312)
T COG0657 77 ATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAPEHPFPAALEDAYAAYRWLRANAAELGIDPSRIAV 156 (312)
T ss_pred CCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCCCCCCCchHHHHHHHHHHHHhhhHhhCCCccceEE
Confidence 35899999999854433 343444444 678999999999877777777777666666655533 23578999
Q ss_pred EEeChhHHHHHHHHHhCCC----CceEEEEeCCCCCCCC
Q 012190 247 VGDSFGGCLALAVAARNPT----IDLILILSNPATSFGR 281 (468)
Q Consensus 247 vGhS~GG~ia~~~a~~~P~----~v~~lVli~p~~~~~~ 281 (468)
+|+|.||.+++.++..-.+ ...+.+++.|......
T Consensus 157 ~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 157 AGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS 195 (312)
T ss_pred EecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc
Confidence 9999999999988876443 4678999998875543
No 122
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.77 E-value=2.6e-08 Score=86.88 Aligned_cols=179 Identities=18% Similarity=0.175 Sum_probs=110.1
Q ss_pred CCCeEEEeCCC----CCchhhHHHhHhhhcCCeEEEEecCCCCCCC-ChHHHHHHHHHHHHHHhhcCCC-CcEEEEEeCh
Q 012190 178 GSPTLLFLPGI----DGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-PFEGLVKFVEETVRREHASSPE-KPIYLVGDSF 251 (468)
Q Consensus 178 ~~p~lV~lHG~----~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-s~~~~~~dl~~~i~~~~~~~~~-~~i~LvGhS~ 251 (468)
..+.+||+||. +.-..........+..+|+|..+++--+-+- +++....++...++......++ +.+.+-|||.
T Consensus 66 ~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~l~~q~htL~qt~~~~~~gv~filk~~~n~k~l~~gGHSa 145 (270)
T KOG4627|consen 66 QAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYNLCPQVHTLEQTMTQFTHGVNFILKYTENTKVLTFGGHSA 145 (270)
T ss_pred CccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccCcCcccccHHHHHHHHHHHHHHHHHhcccceeEEEcccch
Confidence 47799999996 3333345555666788999998875433332 3444444444444333333443 4566778999
Q ss_pred hHHHHHHHHHh-CCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccCCChhHH
Q 012190 252 GGCLALAVAAR-NPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENRLPPRIK 330 (468)
Q Consensus 252 GG~ia~~~a~~-~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (468)
|+.+|+.+..| +..+|.|+++.++...... +. +...++. .+++.++
T Consensus 146 GAHLa~qav~R~r~prI~gl~l~~GvY~l~E---------L~--------------~te~g~d---------lgLt~~~- 192 (270)
T KOG4627|consen 146 GAHLAAQAVMRQRSPRIWGLILLCGVYDLRE---------LS--------------NTESGND---------LGLTERN- 192 (270)
T ss_pred HHHHHHHHHHHhcCchHHHHHHHhhHhhHHH---------Hh--------------CCccccc---------cCcccch-
Confidence 99999887766 4568999998876442100 00 0000000 0000000
Q ss_pred hhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcE
Q 012190 331 LEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCI 410 (468)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~ 410 (468)
.+ ...... ..+..++.|+|++.|++|.---.+ ..+.+...+.+++
T Consensus 193 ae--------------------~~Scdl--------------~~~~~v~~~ilVv~~~~espklie-Qnrdf~~q~~~a~ 237 (270)
T KOG4627|consen 193 AE--------------------SVSCDL--------------WEYTDVTVWILVVAAEHESPKLIE-QNRDFADQLRKAS 237 (270)
T ss_pred hh--------------------hcCccH--------------HHhcCceeeeeEeeecccCcHHHH-hhhhHHHHhhhcc
Confidence 00 000111 244778999999999999766666 6788888888999
Q ss_pred EEEeCCCCcccccc
Q 012190 411 VRNFKDNGHTLLLE 424 (468)
Q Consensus 411 ~~~i~~aGH~~~~e 424 (468)
+..|++.+|+-.++
T Consensus 238 ~~~f~n~~hy~I~~ 251 (270)
T KOG4627|consen 238 FTLFKNYDHYDIIE 251 (270)
T ss_pred eeecCCcchhhHHH
Confidence 99999999997665
No 123
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.76 E-value=2.6e-07 Score=84.05 Aligned_cols=114 Identities=19% Similarity=0.140 Sum_probs=80.0
Q ss_pred CceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhh----
Q 012190 163 PPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHA---- 237 (468)
Q Consensus 163 ~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~---- 237 (468)
++..+.+.+.|. -|.|+|+||+.-....|..++.++ +.+|-|+++++-.--..+-.+-+++..++++.+..
T Consensus 34 pLlI~tP~~~G~----yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~p~~~~Ei~~aa~V~~WL~~gL~~ 109 (307)
T PF07224_consen 34 PLLIVTPSEAGT----YPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFPPDGQDEIKSAASVINWLPEGLQH 109 (307)
T ss_pred CeEEecCCcCCC----ccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccCCCchHHHHHHHHHHHHHHhhhhh
Confidence 345566667766 899999999999999999999999 77899999997543222222222222222222221
Q ss_pred cC------CCCcEEEEEeChhHHHHHHHHHhCC--CCceEEEEeCCCCCCC
Q 012190 238 SS------PEKPIYLVGDSFGGCLALAVAARNP--TIDLILILSNPATSFG 280 (468)
Q Consensus 238 ~~------~~~~i~LvGhS~GG~ia~~~a~~~P--~~v~~lVli~p~~~~~ 280 (468)
.+ ...++.|+|||.||-.|..+|..+. -.+.+||-++|..+..
T Consensus 110 ~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~ 160 (307)
T PF07224_consen 110 VLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTS 160 (307)
T ss_pred hCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCC
Confidence 11 2468999999999999999998773 3578899999977543
No 124
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.75 E-value=6e-08 Score=90.46 Aligned_cols=96 Identities=27% Similarity=0.364 Sum_probs=82.0
Q ss_pred CeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC-----ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHH
Q 012190 180 PTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGC 254 (468)
Q Consensus 180 p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-----s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ 254 (468)
|+|+++|+.+|....|.++...|.....|+.++.||.+.- +++++++...+.|... .+..|++|+|||+||.
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~~~v~~l~a~g~~~~~~~~~~l~~~a~~yv~~Ir~~---QP~GPy~L~G~S~GG~ 77 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPLLPVYGLQAPGYGAGEQPFASLDDMAAAYVAAIRRV---QPEGPYVLLGWSLGGA 77 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccCceeeccccCcccccccccCCHHHHHHHHHHHHHHh---CCCCCEEEEeeccccH
Confidence 5799999999999999999999988899999999999732 5777777777776664 4566999999999999
Q ss_pred HHHHHHHh---CCCCceEEEEeCCCCC
Q 012190 255 LALAVAAR---NPTIDLILILSNPATS 278 (468)
Q Consensus 255 ia~~~a~~---~P~~v~~lVli~p~~~ 278 (468)
+|..+|.+ ..+.|.-++++++...
T Consensus 78 vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 78 VAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 99999976 3467899999998775
No 125
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.73 E-value=7.7e-08 Score=85.50 Aligned_cols=150 Identities=17% Similarity=0.212 Sum_probs=109.2
Q ss_pred CeEEEeCCCCCchhh-HHHhHhhh-cCCeEEEEecC-CCCCCC---------------ChHHHHHHHHHHHHHHhhcCCC
Q 012190 180 PTLLFLPGIDGLGLG-LILHHKPL-GKAFEVRCLHI-PVYDRT---------------PFEGLVKFVEETVRREHASSPE 241 (468)
Q Consensus 180 p~lV~lHG~~~s~~~-~~~~~~~L-~~~~~V~~~D~-~G~G~S---------------s~~~~~~dl~~~i~~~~~~~~~ 241 (468)
..||++--..|.... -+..+..+ ..+|.|+++|+ +|--.+ +.+-.-+++..+++.+......
T Consensus 40 ~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~ 119 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDS 119 (242)
T ss_pred eEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCc
Confidence 456666655555443 66677777 56899999997 553222 2344566777777777766668
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhh
Q 012190 242 KPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNI 321 (468)
Q Consensus 242 ~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (468)
++|-++|.+|||.++..+.+..| .+.+.+..-|...-
T Consensus 120 kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~hps~~d------------------------------------------ 156 (242)
T KOG3043|consen 120 KKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSFHPSFVD------------------------------------------ 156 (242)
T ss_pred ceeeEEEEeecceEEEEeeccch-hheeeeEecCCcCC------------------------------------------
Confidence 89999999999999998888877 67777776552200
Q ss_pred ccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHH
Q 012190 322 ENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKR 401 (468)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~ 401 (468)
......+++|+|++.|+.|.++|+. ....
T Consensus 157 --------------------------------------------------~~D~~~vk~Pilfl~ae~D~~~p~~-~v~~ 185 (242)
T KOG3043|consen 157 --------------------------------------------------SADIANVKAPILFLFAELDEDVPPK-DVKA 185 (242)
T ss_pred --------------------------------------------------hhHHhcCCCCEEEEeecccccCCHH-HHHH
Confidence 0223678899999999999999999 6777
Q ss_pred HHHhCC-----CcEEEEeCCCCccccc
Q 012190 402 LNNSLQ-----NCIVRNFKDNGHTLLL 423 (468)
Q Consensus 402 l~~~l~-----~~~~~~i~~aGH~~~~ 423 (468)
+.+.+. +.++.++++.+|...-
T Consensus 186 ~ee~lk~~~~~~~~v~~f~g~~HGf~~ 212 (242)
T KOG3043|consen 186 WEEKLKENPAVGSQVKTFSGVGHGFVA 212 (242)
T ss_pred HHHHHhcCcccceeEEEcCCccchhhh
Confidence 776664 3479999999998763
No 126
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.73 E-value=1.7e-07 Score=87.62 Aligned_cols=99 Identities=16% Similarity=0.117 Sum_probs=70.4
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhhc-C-C--eEEEE--ecCCCC----C------------------C-CChHHHHHHHH
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPLG-K-A--FEVRC--LHIPVY----D------------------R-TPFEGLVKFVE 229 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~-~-~--~~V~~--~D~~G~----G------------------~-Ss~~~~~~dl~ 229 (468)
..|.||+||++++...+..++..+. + + -.++. ++--|+ | + .+....++.+.
T Consensus 11 ~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~ 90 (255)
T PF06028_consen 11 TTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLK 90 (255)
T ss_dssp -EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHH
T ss_pred CCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHH
Confidence 4579999999999999999998885 3 2 22322 222221 1 1 13678899999
Q ss_pred HHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCC-----CceEEEEeCCCC
Q 012190 230 ETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPT-----IDLILILSNPAT 277 (468)
Q Consensus 230 ~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~-----~v~~lVli~p~~ 277 (468)
.++..+.....-+++.+|||||||..++.++..+.. .+.++|.+++++
T Consensus 91 ~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pf 143 (255)
T PF06028_consen 91 KVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPF 143 (255)
T ss_dssp HHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--T
T ss_pred HHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEecccc
Confidence 999999999889999999999999999999988532 588999998765
No 127
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.71 E-value=2.6e-07 Score=81.68 Aligned_cols=168 Identities=21% Similarity=0.201 Sum_probs=114.7
Q ss_pred CeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC-------------------------ChHHHHHHHHHHHH
Q 012190 180 PTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-------------------------PFEGLVKFVEETVR 233 (468)
Q Consensus 180 p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S-------------------------s~~~~~~dl~~~i~ 233 (468)
.+||++||.+.++..|..+++.| -++..-+|+..|-.--+ ++...++.+..+++
T Consensus 4 atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li~ 83 (206)
T KOG2112|consen 4 ATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLID 83 (206)
T ss_pred EEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHHH
Confidence 47999999999999999888888 45566677654422111 35566777777777
Q ss_pred HHhhcC-CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCC
Q 012190 234 REHASS-PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGD 312 (468)
Q Consensus 234 ~~~~~~-~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (468)
++-... +..+|.+-|.||||++|+..+..+|..+.+.+...+.......
T Consensus 84 ~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~------------------------------ 133 (206)
T KOG2112|consen 84 NEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASI------------------------------ 133 (206)
T ss_pred HHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchh------------------------------
Confidence 765432 3456899999999999999999998888777775542211000
Q ss_pred hhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCC
Q 012190 313 PIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNM 392 (468)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~ 392 (468)
.+ +.-. .. .+ ..|++..||+.|++
T Consensus 134 --------------------~~------------------~~~~----------------~~-~~-~~~i~~~Hg~~d~~ 157 (206)
T KOG2112|consen 134 --------------------GL------------------PGWL----------------PG-VN-YTPILLCHGTADPL 157 (206)
T ss_pred --------------------hc------------------cCCc----------------cc-cC-cchhheecccCCce
Confidence 00 0000 00 11 67999999999999
Q ss_pred CCcHHHHHHHHHhC----CCcEEEEeCCCCccccccCcHHHHHHHH
Q 012190 393 LPSEDEAKRLNNSL----QNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (468)
Q Consensus 393 v~~~~~~~~l~~~l----~~~~~~~i~~aGH~~~~e~p~~~~~~I~ 434 (468)
+|.. ..+.-.+.+ ..+++..+++.+|...-+.=+++...|.
T Consensus 158 vp~~-~g~~s~~~l~~~~~~~~f~~y~g~~h~~~~~e~~~~~~~~~ 202 (206)
T KOG2112|consen 158 VPFR-FGEKSAQFLKSLGVRVTFKPYPGLGHSTSPQELDDLKSWIK 202 (206)
T ss_pred eehH-HHHHHHHHHHHcCCceeeeecCCccccccHHHHHHHHHHHH
Confidence 9987 454444443 3578889999999987666565555554
No 128
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.69 E-value=2.2e-06 Score=77.30 Aligned_cols=236 Identities=13% Similarity=0.130 Sum_probs=132.0
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh----cCCeEEEEecCCCCCCC----------------ChHHHHHHHHHHHHHHhh
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL----GKAFEVRCLHIPVYDRT----------------PFEGLVKFVEETVRREHA 237 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L----~~~~~V~~~D~~G~G~S----------------s~~~~~~dl~~~i~~~~~ 237 (468)
+++.+++++|.+|....|.+++.+| .+.+.++.+...||..- ++++.++--.++++....
T Consensus 28 ~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~P 107 (301)
T KOG3975|consen 28 DKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYVP 107 (301)
T ss_pred CceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhCC
Confidence 5889999999999999998888777 33466898888887532 467788877788877543
Q ss_pred cCCCCcEEEEEeChhHHHHHHHHHhCC--CCceEEEEeCCCCCC-CCCC-cCcchHHHhhCchh-------HHhhHHHHh
Q 012190 238 SSPEKPIYLVGDSFGGCLALAVAARNP--TIDLILILSNPATSF-GRSQ-LQPLFPILKAMPDE-------LHCAVPYLL 306 (468)
Q Consensus 238 ~~~~~~i~LvGhS~GG~ia~~~a~~~P--~~v~~lVli~p~~~~-~~~~-~~~~~~~~~~~~~~-------~~~~~~~~~ 306 (468)
+ +.+++++|||-|+.+.+.+..... -.|++++++=|...- ..++ ...+...+..++-. +....|.+.
T Consensus 108 k--~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~~~lp~~i 185 (301)
T KOG3975|consen 108 K--DRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYWILLPGFI 185 (301)
T ss_pred C--CCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeeeeeecChHHH
Confidence 3 679999999999999999887432 257788887765411 1111 01111111111100 000111111
Q ss_pred hhhcCChhhHHHHhhccCCChhHHh-hhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEE
Q 012190 307 SYVMGDPIKMAMVNIENRLPPRIKL-EQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVL 385 (468)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI 385 (468)
+.+.-.- .......+++.. ..+.-.- +..-.-...+..+.+. .....+ .+-+.+-.+-+-+.
T Consensus 186 r~~Li~~------~l~~~n~p~e~l~tal~l~h----~~v~rn~v~la~qEm~----eV~~~d---~e~~een~d~l~Fy 248 (301)
T KOG3975|consen 186 RFILIKF------MLCGSNGPQEFLSTALFLTH----PQVVRNSVGLAAQEME----EVTTRD---IEYCEENLDSLWFY 248 (301)
T ss_pred HHHHHHH------hcccCCCcHHHHhhHHHhhc----HHHHHHHhhhchHHHH----HHHHhH---HHHHHhcCcEEEEE
Confidence 1110000 000000000000 0000000 0000000000000000 000111 12234445678899
Q ss_pred EeCCCCCCCcHHHHHHHHHhCCCc--EEEEeCCCCccccccCcHHHHHHHH
Q 012190 386 ASGKDNMLPSEDEAKRLNNSLQNC--IVRNFKDNGHTLLLEEGISLLTIIK 434 (468)
Q Consensus 386 ~G~~D~~v~~~~~~~~l~~~l~~~--~~~~i~~aGH~~~~e~p~~~~~~I~ 434 (468)
+|..|.++|.+ ....+.+.+|.- ++-+ ++..|.....+.+..+..+.
T Consensus 249 ygt~DgW~p~~-~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~ 297 (301)
T KOG3975|consen 249 YGTNDGWVPSH-YYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVF 297 (301)
T ss_pred ccCCCCCcchH-HHHHHhhhcchhceeecc-ccCCcceeecccHHHHHHHH
Confidence 99999999999 799999999854 4444 77999999999999988887
No 129
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.69 E-value=1.2e-07 Score=91.09 Aligned_cols=199 Identities=19% Similarity=0.200 Sum_probs=119.7
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCC--CCC-------------ChHHHHHHHHHHHHHHhhc---
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVY--DRT-------------PFEGLVKFVEETVRREHAS--- 238 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~--G~S-------------s~~~~~~dl~~~i~~~~~~--- 238 (468)
.-|.||+-||.+++...|..+.+.| +.+|-|.++|.||- |+. .+-+...|+..+++.+...
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~s 149 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTAS 149 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcC
Confidence 4789999999999999999999999 77899999999983 222 1224444555555444332
Q ss_pred ------CCCCcEEEEEeChhHHHHHHHHHhCCCCceE--------EEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHH
Q 012190 239 ------SPEKPIYLVGDSFGGCLALAVAARNPTIDLI--------LILSNPATSFGRSQLQPLFPILKAMPDELHCAVPY 304 (468)
Q Consensus 239 ------~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~--------lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (468)
....+|.++|||+||..++..+.-..+.... .++..+..... ..+...... . .+
T Consensus 150 P~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~~~~~~~~~--------~~l~q~~av-~--~~- 217 (365)
T COG4188 150 PALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRICLDPPGLNG--------RLLNQCAAV-W--LP- 217 (365)
T ss_pred cccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcccCCCCcCh--------hhhcccccc-c--cc-
Confidence 3456899999999999999888654332110 11111111000 000000000 0 00
Q ss_pred HhhhhcCChhhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEE
Q 012190 305 LLSYVMGDPIKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLV 384 (468)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLl 384 (468)
.......++ .. .......+...... -...+.+++.|+++
T Consensus 218 ~~~~~~rDp--------------------ri----------ravvA~~p~~~~~F-----------g~tgl~~v~~P~~~ 256 (365)
T COG4188 218 RQAYDLRDP--------------------RI----------RAVVAINPALGMIF-----------GTTGLVKVTDPVLL 256 (365)
T ss_pred hhhhccccc--------------------cc----------eeeeeccCCccccc-----------ccccceeeecceee
Confidence 000000000 00 00000001100000 02456889999999
Q ss_pred EEeCCCCCCCcHHHHHHHHHhCCCc--EEEEeCCCCccccccCcHHH
Q 012190 385 LASGKDNMLPSEDEAKRLNNSLQNC--IVRNFKDNGHTLLLEEGISL 429 (468)
Q Consensus 385 I~G~~D~~v~~~~~~~~l~~~l~~~--~~~~i~~aGH~~~~e~p~~~ 429 (468)
+.|..|...|+..+.......+++. -+..++++.|+-++|...+.
T Consensus 257 ~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 257 AAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred ecccccccCCcccccccccccCCcchhheeecCCCccccccccCccc
Confidence 9999999888876677778888866 67889999999999988875
No 130
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=98.66 E-value=2e-06 Score=83.54 Aligned_cols=104 Identities=18% Similarity=0.138 Sum_probs=76.3
Q ss_pred CCCCeEEEeCCCCCc-----hhhHHHhHhhh--cCCeEEEEecCCCCCCCC----hHHHHHHHHHHHHH--HhhcCCCCc
Q 012190 177 KGSPTLLFLPGIDGL-----GLGLILHHKPL--GKAFEVRCLHIPVYDRTP----FEGLVKFVEETVRR--EHASSPEKP 243 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s-----~~~~~~~~~~L--~~~~~V~~~D~~G~G~Ss----~~~~~~dl~~~i~~--~~~~~~~~~ 243 (468)
...|.|||+||.|.. ...|..+...+ ..+.-|+.+|+|=.-+.. ++|..+.+..+.++ +......++
T Consensus 88 ~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~r 167 (336)
T KOG1515|consen 88 TKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLAPEHPFPAAYDDGWAALKWVLKNSWLKLGADPSR 167 (336)
T ss_pred cCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccCCCCCCCccchHHHHHHHHHHHhHHHHhCCCccc
Confidence 468999999998543 33677777777 346888889998766654 56666666666553 222234567
Q ss_pred EEEEEeChhHHHHHHHHHhC------CCCceEEEEeCCCCCCC
Q 012190 244 IYLVGDSFGGCLALAVAARN------PTIDLILILSNPATSFG 280 (468)
Q Consensus 244 i~LvGhS~GG~ia~~~a~~~------P~~v~~lVli~p~~~~~ 280 (468)
|+|+|-|.||.+|..+|.+. +.+++|.|++.|.+...
T Consensus 168 v~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~ 210 (336)
T KOG1515|consen 168 VFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGT 210 (336)
T ss_pred EEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCC
Confidence 99999999999999888662 46799999999987543
No 131
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.65 E-value=6.4e-07 Score=97.00 Aligned_cols=80 Identities=14% Similarity=0.051 Sum_probs=63.4
Q ss_pred Hhhh-cCCeEEEEecCCCCCCCC-----h-HHHHHHHHHHHHHHhhc----------------CCCCcEEEEEeChhHHH
Q 012190 199 HKPL-GKAFEVRCLHIPVYDRTP-----F-EGLVKFVEETVRREHAS----------------SPEKPIYLVGDSFGGCL 255 (468)
Q Consensus 199 ~~~L-~~~~~V~~~D~~G~G~Ss-----~-~~~~~dl~~~i~~~~~~----------------~~~~~i~LvGhS~GG~i 255 (468)
...+ .+||.|+..|.||+|.|+ . .+-.+|..++|+.+..+ -.+.+|.++|.|+||.+
T Consensus 272 ~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~ 351 (767)
T PRK05371 272 NDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTL 351 (767)
T ss_pred HHHHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHH
Confidence 3455 779999999999999983 2 45566777777776522 12569999999999999
Q ss_pred HHHHHHhCCCCceEEEEeCCCCC
Q 012190 256 ALAVAARNPTIDLILILSNPATS 278 (468)
Q Consensus 256 a~~~a~~~P~~v~~lVli~p~~~ 278 (468)
++.+|+..|+.++++|..++...
T Consensus 352 ~~~aAa~~pp~LkAIVp~a~is~ 374 (767)
T PRK05371 352 PNAVATTGVEGLETIIPEAAISS 374 (767)
T ss_pred HHHHHhhCCCcceEEEeeCCCCc
Confidence 99999999999999999877543
No 132
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=98.65 E-value=8.2e-07 Score=79.05 Aligned_cols=55 Identities=20% Similarity=0.332 Sum_probs=46.5
Q ss_pred ccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHH
Q 012190 376 HAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIK 434 (468)
Q Consensus 376 ~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~ 434 (468)
..+++|.|-|.|+.|.+++.. .++.+++.+++..+..-+ +||++.-.+ ...+.|.
T Consensus 160 ~~i~~PSLHi~G~~D~iv~~~-~s~~L~~~~~~a~vl~Hp-ggH~VP~~~--~~~~~i~ 214 (230)
T KOG2551|consen 160 RPLSTPSLHIFGETDTIVPSE-RSEQLAESFKDATVLEHP-GGHIVPNKA--KYKEKIA 214 (230)
T ss_pred cCCCCCeeEEecccceeecch-HHHHHHHhcCCCeEEecC-CCccCCCch--HHHHHHH
Confidence 678999999999999999999 799999999999777777 599998655 4445555
No 133
>PRK04940 hypothetical protein; Provisional
Probab=98.64 E-value=2.2e-06 Score=75.14 Aligned_cols=90 Identities=13% Similarity=0.111 Sum_probs=56.1
Q ss_pred EEEeCCCCCchhh--HHHh-HhhhcCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHH
Q 012190 182 LLFLPGIDGLGLG--LILH-HKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALA 258 (468)
Q Consensus 182 lV~lHG~~~s~~~--~~~~-~~~L~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~ 258 (468)
||++|||.+|+.+ .+.. .+.+....+++ +++ .- ...+..+.+.+.+..+......+++.|||+|+||..|..
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~~~~p~~~~~--~l~--~~-~P~~a~~~l~~~i~~~~~~~~~~~~~liGSSLGGyyA~~ 76 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQFIDPDVRLI--SYS--TL-HPKHDMQHLLKEVDKMLQLSDDERPLICGVGLGGYWAER 76 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhheeeCCCCeEE--ECC--CC-CHHHHHHHHHHHHHHhhhccCCCCcEEEEeChHHHHHHH
Confidence 7999999999887 5332 22333334444 443 11 223333445555543221111247899999999999999
Q ss_pred HHHhCCCCceEEEEeCCCCCC
Q 012190 259 VAARNPTIDLILILSNPATSF 279 (468)
Q Consensus 259 ~a~~~P~~v~~lVli~p~~~~ 279 (468)
+|.++. + ..||+||+..+
T Consensus 77 La~~~g--~-~aVLiNPAv~P 94 (180)
T PRK04940 77 IGFLCG--I-RQVIFNPNLFP 94 (180)
T ss_pred HHHHHC--C-CEEEECCCCCh
Confidence 999983 3 68899997643
No 134
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.64 E-value=5.4e-07 Score=79.13 Aligned_cols=97 Identities=21% Similarity=0.160 Sum_probs=81.4
Q ss_pred eEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCC--CCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHH
Q 012190 181 TLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYD--RTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLAL 257 (468)
Q Consensus 181 ~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G--~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~ 257 (468)
.+||+-|=+|-...-..++..| .+|+.|+.+|-+-|= +-+.++.+.|+..++++...+...++++|+|+|+|+-+.-
T Consensus 4 ~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~rtP~~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvlP 83 (192)
T PF06057_consen 4 LAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSERTPEQTAADLARIIRHYRARWGRKRVVLIGYSFGADVLP 83 (192)
T ss_pred EEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhhCCHHHHHHHHHHHHHHHHHHhCCceEEEEeecCCchhHH
Confidence 5788888888776666788899 778999999976543 3378999999999999998888889999999999999988
Q ss_pred HHHHhCC----CCceEEEEeCCCC
Q 012190 258 AVAARNP----TIDLILILSNPAT 277 (468)
Q Consensus 258 ~~a~~~P----~~v~~lVli~p~~ 277 (468)
....+.| ++|..++|++|..
T Consensus 84 ~~~nrLp~~~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 84 FIYNRLPAALRARVAQVVLLSPST 107 (192)
T ss_pred HHHhhCCHHHHhheeEEEEeccCC
Confidence 8887776 5789999998855
No 135
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.62 E-value=7.2e-07 Score=96.33 Aligned_cols=189 Identities=16% Similarity=0.126 Sum_probs=120.0
Q ss_pred CCCCeEEEeCCCCCchh-------hHHHhHhhhcCCeEEEEecCCCCCCC---------------ChHHHHHHHHHHHHH
Q 012190 177 KGSPTLLFLPGIDGLGL-------GLILHHKPLGKAFEVRCLHIPVYDRT---------------PFEGLVKFVEETVRR 234 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~~-------~~~~~~~~L~~~~~V~~~D~~G~G~S---------------s~~~~~~dl~~~i~~ 234 (468)
+.-|.+|.+||.+++.. .|... -.-..++-|+.+|.||-|.. +.+|....+..+++.
T Consensus 524 ~kyPllv~~yGGP~sq~v~~~~~~~~~~~-~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~ 602 (755)
T KOG2100|consen 524 KKYPLLVVVYGGPGSQSVTSKFSVDWNEV-VVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKL 602 (755)
T ss_pred CCCCEEEEecCCCCcceeeeeEEecHHHH-hhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhc
Confidence 35688899999997443 23322 11156899999999998754 356666666666665
Q ss_pred HhhcCCCCcEEEEEeChhHHHHHHHHHhCCCC-ceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCCh
Q 012190 235 EHASSPEKPIYLVGDSFGGCLALAVAARNPTI-DLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDP 313 (468)
Q Consensus 235 ~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~-v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (468)
.. ...+++.++|+|.||.+++.++...|+. ++..+.++|.+.+....-....+. ++.+
T Consensus 603 ~~--iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~~yds~~tery-------------------mg~p 661 (755)
T KOG2100|consen 603 PF--IDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWLYYDSTYTERY-------------------MGLP 661 (755)
T ss_pred cc--ccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeeeeecccccHhh-------------------cCCC
Confidence 53 3467999999999999999999999854 555599999775421110000000 0000
Q ss_pred hhHHHHhhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceE-EEEEeCCCCC
Q 012190 314 IKMAMVNIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEV-LVLASGKDNM 392 (468)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~Pv-LlI~G~~D~~ 392 (468)
.+..... .. ......+..++.|. |+|||+.|..
T Consensus 662 ----------------------------------------~~~~~~y----~e--~~~~~~~~~~~~~~~LliHGt~Ddn 695 (755)
T KOG2100|consen 662 ----------------------------------------SENDKGY----EE--SSVSSPANNIKTPKLLLIHGTEDDN 695 (755)
T ss_pred ----------------------------------------ccccchh----hh--ccccchhhhhccCCEEEEEcCCcCC
Confidence 0000000 00 00012335556665 9999999999
Q ss_pred CCcHHHHHHHHHhCC----CcEEEEeCCCCccccccCc-HHHHHHHH
Q 012190 393 LPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLEEG-ISLLTIIK 434 (468)
Q Consensus 393 v~~~~~~~~l~~~l~----~~~~~~i~~aGH~~~~e~p-~~~~~~I~ 434 (468)
+..+ +...+.+.+. ..++.++|+..|.+-.-.. ..+...+.
T Consensus 696 Vh~q-~s~~~~~aL~~~gv~~~~~vypde~H~is~~~~~~~~~~~~~ 741 (755)
T KOG2100|consen 696 VHFQ-QSAILIKALQNAGVPFRLLVYPDENHGISYVEVISHLYEKLD 741 (755)
T ss_pred cCHH-HHHHHHHHHHHCCCceEEEEeCCCCcccccccchHHHHHHHH
Confidence 9988 7888887664 4789999999999876443 44444444
No 136
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.59 E-value=1.8e-06 Score=78.46 Aligned_cols=91 Identities=27% Similarity=0.306 Sum_probs=69.7
Q ss_pred EeCCCC--CchhhHHHhHhhhcCCeEEEEecCCCCCCC-----ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHH
Q 012190 184 FLPGID--GLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLA 256 (468)
Q Consensus 184 ~lHG~~--~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-----s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia 256 (468)
++|+.+ ++...|..+...|...+.|+++|.+|++.+ +++++++.....+.. ..+..+++++|||+||.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~l~g~s~Gg~~a 78 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRGRRDVSALPLPGFGPGEPLPASADALVEAQAEAVLR---AAGGRPFVLVGHSSGGLLA 78 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCCCccEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHH---hcCCCCeEEEEECHHHHHH
Confidence 455544 677789999999988899999999999865 356666655544443 2346689999999999999
Q ss_pred HHHHHh---CCCCceEEEEeCCCC
Q 012190 257 LAVAAR---NPTIDLILILSNPAT 277 (468)
Q Consensus 257 ~~~a~~---~P~~v~~lVli~p~~ 277 (468)
..++.+ .++.+.+++++++..
T Consensus 79 ~~~a~~l~~~~~~~~~l~~~~~~~ 102 (212)
T smart00824 79 HAVAARLEARGIPPAAVVLLDTYP 102 (212)
T ss_pred HHHHHHHHhCCCCCcEEEEEccCC
Confidence 988876 456789999887643
No 137
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.47 E-value=1.1e-06 Score=81.84 Aligned_cols=97 Identities=16% Similarity=0.182 Sum_probs=66.9
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC----------------------C-----------hHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT----------------------P-----------FEG 223 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S----------------------s-----------~~~ 223 (468)
+-|.+||-||++++...|..+...| +.||-|.+++.|-+..+ + -+.
T Consensus 117 k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNeq 196 (399)
T KOG3847|consen 117 KYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNEQ 196 (399)
T ss_pred CccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCHH
Confidence 4789999999999999999999999 77899999999866432 0 011
Q ss_pred H---HHHHHH---HHHHHh--------------------hcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCC
Q 012190 224 L---VKFVEE---TVRREH--------------------ASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNP 275 (468)
Q Consensus 224 ~---~~dl~~---~i~~~~--------------------~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p 275 (468)
. ++.... +++++. ..+.-.++.++|||+||+.++...+.+ ..++..|+++.
T Consensus 197 v~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~-t~FrcaI~lD~ 273 (399)
T KOG3847|consen 197 VGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSH-TDFRCAIALDA 273 (399)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccc-cceeeeeeeee
Confidence 1 111111 111111 112223588999999999999877776 45777777665
No 138
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.46 E-value=1.9e-06 Score=80.19 Aligned_cols=100 Identities=16% Similarity=0.074 Sum_probs=72.3
Q ss_pred CCCeEEEeCCCCCchhhHHH----hHhhhcCCeEEEEecCCCCCCC--------ChHHHHHHHHHHHHHHhhcCCCCcEE
Q 012190 178 GSPTLLFLPGIDGLGLGLIL----HHKPLGKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIY 245 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~----~~~~L~~~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~~~~~~~~~~~i~ 245 (468)
++..+||+||+..+...-.. +...+.-...++++.+|+.|.. +...-...+.++++.+....+.++|+
T Consensus 17 ~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ 96 (233)
T PF05990_consen 17 DKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRIH 96 (233)
T ss_pred CCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceEE
Confidence 36699999999999764333 2233333348999999998854 24455667777777776666788999
Q ss_pred EEEeChhHHHHHHHHHh----CC-----CCceEEEEeCCCC
Q 012190 246 LVGDSFGGCLALAVAAR----NP-----TIDLILILSNPAT 277 (468)
Q Consensus 246 LvGhS~GG~ia~~~a~~----~P-----~~v~~lVli~p~~ 277 (468)
|++||||+.+.+..... .+ ..+..+|+++|-.
T Consensus 97 ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDi 137 (233)
T PF05990_consen 97 ILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDI 137 (233)
T ss_pred EEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCC
Confidence 99999999998877644 21 3677889988744
No 139
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.45 E-value=5.3e-07 Score=82.33 Aligned_cols=82 Identities=17% Similarity=0.147 Sum_probs=56.2
Q ss_pred eEEEeCCCCC-chhhHHHhHhhh-cCCeE---EEEecCCCCCCCC-------hHHHHHHHHHHHHHHhhcCCCCcEEEEE
Q 012190 181 TLLFLPGIDG-LGLGLILHHKPL-GKAFE---VRCLHIPVYDRTP-------FEGLVKFVEETVRREHASSPEKPIYLVG 248 (468)
Q Consensus 181 ~lV~lHG~~~-s~~~~~~~~~~L-~~~~~---V~~~D~~G~G~Ss-------~~~~~~dl~~~i~~~~~~~~~~~i~LvG 248 (468)
||||+||.++ ....|..+.+.| +++|. |+++++-...... ..+.++.+.++++.+...-+. +|-|||
T Consensus 3 PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIVg 81 (219)
T PF01674_consen 3 PVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIVG 81 (219)
T ss_dssp -EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEEE
T ss_pred CEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEEE
Confidence 6999999999 667899999999 78888 8999985554422 223446788888887766667 999999
Q ss_pred eChhHHHHHHHHHhC
Q 012190 249 DSFGGCLALAVAARN 263 (468)
Q Consensus 249 hS~GG~ia~~~a~~~ 263 (468)
|||||.++-.+....
T Consensus 82 HS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 82 HSMGGTIARYYIKGG 96 (219)
T ss_dssp ETCHHHHHHHHHHHC
T ss_pred cCCcCHHHHHHHHHc
Confidence 999999988777544
No 140
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.45 E-value=5.3e-07 Score=91.05 Aligned_cols=89 Identities=10% Similarity=-0.069 Sum_probs=70.5
Q ss_pred CCchhhHHHhHhhhcCCeEEEEecCCCCCCC-----ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhC
Q 012190 189 DGLGLGLILHHKPLGKAFEVRCLHIPVYDRT-----PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARN 263 (468)
Q Consensus 189 ~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S-----s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~ 263 (468)
......|..+++.|.+...+...|++|+|.+ ..++..+++.++++......+.++++|+||||||.++..++..+
T Consensus 104 ~~~~~~~~~li~~L~~~GY~~~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~ 183 (440)
T PLN02733 104 LDEVYYFHDMIEQLIKWGYKEGKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLH 183 (440)
T ss_pred cchHHHHHHHHHHHHHcCCccCCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHC
Confidence 3556789999999944333448899999875 25666777777777776667788999999999999999999988
Q ss_pred CC----CceEEEEeCCCC
Q 012190 264 PT----IDLILILSNPAT 277 (468)
Q Consensus 264 P~----~v~~lVli~p~~ 277 (468)
|+ .|+++|.++++.
T Consensus 184 p~~~~k~I~~~I~la~P~ 201 (440)
T PLN02733 184 SDVFEKYVNSWIAIAAPF 201 (440)
T ss_pred CHhHHhHhccEEEECCCC
Confidence 86 478889988765
No 141
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.43 E-value=3.3e-05 Score=77.18 Aligned_cols=82 Identities=21% Similarity=0.267 Sum_probs=63.6
Q ss_pred hHhhhcCCeEEEEecC---CCCCCCChHHHHHHHHHHHHHHhhcCCCC-cEEEEEeChhHHHHHHHHHhCCCCceEEEEe
Q 012190 198 HHKPLGKAFEVRCLHI---PVYDRTPFEGLVKFVEETVRREHASSPEK-PIYLVGDSFGGCLALAVAARNPTIDLILILS 273 (468)
Q Consensus 198 ~~~~L~~~~~V~~~D~---~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~-~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli 273 (468)
+...|..|+.||.+.+ |--|+ +++|.......+++.+...++.. +.+|+|-+.||..++.+|+.+|+.+.-+|+.
T Consensus 93 vG~AL~~GHPvYFV~F~p~P~pgQ-Tl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvla 171 (581)
T PF11339_consen 93 VGVALRAGHPVYFVGFFPEPEPGQ-TLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLA 171 (581)
T ss_pred HHHHHHcCCCeEEEEecCCCCCCC-cHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeec
Confidence 4566767777776554 33333 68888888888888888777644 7889999999999999999999999888887
Q ss_pred CCCCCCC
Q 012190 274 NPATSFG 280 (468)
Q Consensus 274 ~p~~~~~ 280 (468)
+.+.+..
T Consensus 172 GaPlsyw 178 (581)
T PF11339_consen 172 GAPLSYW 178 (581)
T ss_pred CCCcccc
Confidence 7766443
No 142
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.42 E-value=7.5e-07 Score=86.99 Aligned_cols=102 Identities=18% Similarity=0.132 Sum_probs=65.6
Q ss_pred CCCCeEEEeCCCCCch--hhHHH-hHhhh-c---CCeEEEEecCCCCCCCC-------hHHHHHHHHHHHHHHhh--cCC
Q 012190 177 KGSPTLLFLPGIDGLG--LGLIL-HHKPL-G---KAFEVRCLHIPVYDRTP-------FEGLVKFVEETVRREHA--SSP 240 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~--~~~~~-~~~~L-~---~~~~V~~~D~~G~G~Ss-------~~~~~~dl~~~i~~~~~--~~~ 240 (468)
.+.|++|++||+.++. ..|.. +.+.+ . ..++|+++|+....... .....+.+..++..+.. ..+
T Consensus 69 ~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~ 148 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFGVP 148 (331)
T ss_dssp TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH---
T ss_pred CCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcCCC
Confidence 3588999999999988 34544 44544 4 47999999995432221 34445555555555542 234
Q ss_pred CCcEEEEEeChhHHHHHHHHHhCCC--CceEEEEeCCCCC
Q 012190 241 EKPIYLVGDSFGGCLALAVAARNPT--IDLILILSNPATS 278 (468)
Q Consensus 241 ~~~i~LvGhS~GG~ia~~~a~~~P~--~v~~lVli~p~~~ 278 (468)
..+++|||||+||.+|-.++..... ++..+..++|+..
T Consensus 149 ~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 149 PENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred hhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 6799999999999999988888777 8999999999764
No 143
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.26 E-value=8.6e-05 Score=71.51 Aligned_cols=80 Identities=20% Similarity=0.138 Sum_probs=51.2
Q ss_pred hHhhhcCCeEEEEecCCCCCCC--ChHHHHHHHHHHHHHHhhcC------CCCcEEEEEeChhHHHHHHHHHh----CCC
Q 012190 198 HHKPLGKAFEVRCLHIPVYDRT--PFEGLVKFVEETVRREHASS------PEKPIYLVGDSFGGCLALAVAAR----NPT 265 (468)
Q Consensus 198 ~~~~L~~~~~V~~~D~~G~G~S--s~~~~~~dl~~~i~~~~~~~------~~~~i~LvGhS~GG~ia~~~a~~----~P~ 265 (468)
+...|.+||.|++.|+.|.|.. .-...+..+.+.++..+... ...++.++|||-||.-++..|.. -||
T Consensus 19 l~~~L~~GyaVv~pDY~Glg~~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~YApe 98 (290)
T PF03583_consen 19 LAAWLARGYAVVAPDYEGLGTPYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPSYAPE 98 (290)
T ss_pred HHHHHHCCCEEEecCCCCCCCcccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHHhCcc
Confidence 4456699999999999999863 11233333333333333111 24689999999999988766643 355
Q ss_pred C---ceEEEEeCCCC
Q 012190 266 I---DLILILSNPAT 277 (468)
Q Consensus 266 ~---v~~lVli~p~~ 277 (468)
. +.+.++.+++.
T Consensus 99 L~~~l~Gaa~gg~~~ 113 (290)
T PF03583_consen 99 LNRDLVGAAAGGPPA 113 (290)
T ss_pred cccceeEEeccCCcc
Confidence 4 56777666544
No 144
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.25 E-value=9.8e-06 Score=81.62 Aligned_cols=163 Identities=17% Similarity=0.183 Sum_probs=109.3
Q ss_pred CCCCeEEEeCCCCC--chh----hHHHhHhhhcCCeEEEEecCCC-CCCCChHHHHHHHHHH----HHHHhhcCCCCcEE
Q 012190 177 KGSPTLLFLPGIDG--LGL----GLILHHKPLGKAFEVRCLHIPV-YDRTPFEGLVKFVEET----VRREHASSPEKPIY 245 (468)
Q Consensus 177 ~~~p~lV~lHG~~~--s~~----~~~~~~~~L~~~~~V~~~D~~G-~G~Ss~~~~~~dl~~~----i~~~~~~~~~~~i~ 245 (468)
+..|.+|++||.+. ... .|........+...|-++|++. .|.-.+...++.+..+ +.++..+++..+|+
T Consensus 174 ~~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG~nI~h~ae~~vSf~r~kvlei~gefpha~Ii 253 (784)
T KOG3253|consen 174 PASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGGANIKHAAEYSVSFDRYKVLEITGEFPHAPII 253 (784)
T ss_pred cCCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCCcchHHHHHHHHHHhhhhhhhhhccCCCCceE
Confidence 45788999999981 111 3344444446667888888864 4545544444444444 44555567889999
Q ss_pred EEEeChhHHHHHHHHHhCC-CCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHHhhccC
Q 012190 246 LVGDSFGGCLALAVAARNP-TIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMVNIENR 324 (468)
Q Consensus 246 LvGhS~GG~ia~~~a~~~P-~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (468)
|+|.|||+.++.+....+- ..|+++|+++=+......+
T Consensus 254 LvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdgp----------------------------------------- 292 (784)
T KOG3253|consen 254 LVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDGP----------------------------------------- 292 (784)
T ss_pred EEecccCceeeEEeccccCCceEEEEEEecccccCCCcc-----------------------------------------
Confidence 9999999998888776653 2377777765221100000
Q ss_pred CChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhcccCCceEEEEEeCCCCCCCcHHHHHHHHH
Q 012190 325 LPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRLHAVKAEVLVLASGKDNMLPSEDEAKRLNN 404 (468)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~ 404 (468)
+. .+ .+.+-.++.|+|++.|.+|..++++ ..+.+.+
T Consensus 293 -------rg------------------ir------------------DE~Lldmk~PVLFV~Gsnd~mcspn-~ME~vre 328 (784)
T KOG3253|consen 293 -------RG------------------IR------------------DEALLDMKQPVLFVIGSNDHMCSPN-SMEEVRE 328 (784)
T ss_pred -------cC------------------Cc------------------chhhHhcCCceEEEecCCcccCCHH-HHHHHHH
Confidence 00 00 1334567899999999999999999 6999988
Q ss_pred hCC-CcEEEEeCCCCcccccc
Q 012190 405 SLQ-NCIVRNFKDNGHTLLLE 424 (468)
Q Consensus 405 ~l~-~~~~~~i~~aGH~~~~e 424 (468)
.+. ..+++++.+++|.+-.-
T Consensus 329 KMqA~~elhVI~~adhsmaip 349 (784)
T KOG3253|consen 329 KMQAEVELHVIGGADHSMAIP 349 (784)
T ss_pred HhhccceEEEecCCCccccCC
Confidence 775 67899999999987553
No 145
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.20 E-value=5.4e-05 Score=77.03 Aligned_cols=104 Identities=19% Similarity=0.197 Sum_probs=70.3
Q ss_pred CCCCCeEEEeCCCCCchhhHHHhHh-------------------hhcCCeEEEEecCC-CCCCC----------ChHHHH
Q 012190 176 LKGSPTLLFLPGIDGLGLGLILHHK-------------------PLGKAFEVRCLHIP-VYDRT----------PFEGLV 225 (468)
Q Consensus 176 ~~~~p~lV~lHG~~~s~~~~~~~~~-------------------~L~~~~~V~~~D~~-G~G~S----------s~~~~~ 225 (468)
.++.|++|.+.|.+|++..+..+.+ .+.+..+++-+|.| |.|.| +.++.+
T Consensus 37 ~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a 116 (415)
T PF00450_consen 37 PEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAA 116 (415)
T ss_dssp GCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHH
T ss_pred CCCccEEEEecCCceeccccccccccCceEEeecccccccccccccccccceEEEeecCceEEeeccccccccchhhHHH
Confidence 3568999999999999887643321 11235789999966 88877 356777
Q ss_pred HHHHHHHHHHhhcCC---CCcEEEEEeChhHHHHHHHHHh----C------CCCceEEEEeCCCCCC
Q 012190 226 KFVEETVRREHASSP---EKPIYLVGDSFGGCLALAVAAR----N------PTIDLILILSNPATSF 279 (468)
Q Consensus 226 ~dl~~~i~~~~~~~~---~~~i~LvGhS~GG~ia~~~a~~----~------P~~v~~lVli~p~~~~ 279 (468)
+++.++++......+ ..+++|.|.|+||..+-.+|.. . +-.++|+++.+|....
T Consensus 117 ~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 117 EDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp HHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBH
T ss_pred HHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccccc
Confidence 787777777665544 5699999999999987766643 3 3458899999987743
No 146
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.20 E-value=2e-05 Score=73.09 Aligned_cols=114 Identities=18% Similarity=0.201 Sum_probs=67.1
Q ss_pred CCCCceeeeecCCC-CCCCCC-CeEEEeCCCCCchhhHH-HhHhhh--------cCCeEEEEecC-CCCCCCC------h
Q 012190 160 DGGPPRWFCPVDCG-RPLKGS-PTLLFLPGIDGLGLGLI-LHHKPL--------GKAFEVRCLHI-PVYDRTP------F 221 (468)
Q Consensus 160 dg~~~~~~~y~~~g-~~~~~~-p~lV~lHG~~~s~~~~~-~~~~~L--------~~~~~V~~~D~-~G~G~Ss------~ 221 (468)
-|..+.+.-|.+.+ +|.++- |.+||+||.|..+..-. .+...+ ..++-|+++.+ +-+..++ .
T Consensus 170 tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~~t~~~l 249 (387)
T COG4099 170 TGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEEKTLLYL 249 (387)
T ss_pred cCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEcccccccccccccccchhH
Confidence 34444444444322 222344 89999999988877432 222221 12344555542 1122221 2
Q ss_pred HHHHHHHHHHHH-HHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCC
Q 012190 222 EGLVKFVEETVR-REHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNP 275 (468)
Q Consensus 222 ~~~~~dl~~~i~-~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p 275 (468)
....+.+.+.+. +-+ ....+|+++|.|+||.-++.++.++|+.+.+.+++++
T Consensus 250 ~~~idli~~vlas~yn--ID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG 302 (387)
T COG4099 250 IEKIDLILEVLASTYN--IDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAG 302 (387)
T ss_pred HHHHHHHHHHHhhccC--cccceEEEEeecCcchhhHHHHHhCchhhheeeeecC
Confidence 223333332222 211 2356899999999999999999999999999999886
No 147
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.19 E-value=6e-06 Score=77.75 Aligned_cols=93 Identities=16% Similarity=0.153 Sum_probs=64.4
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCC-------hHHHHHHHHH-HHHHHhhcCCCCcEEEEEeC
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTP-------FEGLVKFVEE-TVRREHASSPEKPIYLVGDS 250 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss-------~~~~~~dl~~-~i~~~~~~~~~~~i~LvGhS 250 (468)
...|||.-|..|-.+. --....++.+|.|+.+++||++.|+ -...++.+.+ .|+.++ .+.+.|+|.|+|
T Consensus 243 q~LvIC~EGNAGFYEv-G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lg--f~~edIilygWS 319 (517)
T KOG1553|consen 243 QDLVICFEGNAGFYEV-GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLG--FRQEDIILYGWS 319 (517)
T ss_pred ceEEEEecCCccceEe-eeecChHHhCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHcC--CCccceEEEEee
Confidence 4577888876554331 1123445679999999999999995 1112222222 233322 567789999999
Q ss_pred hhHHHHHHHHHhCCCCceEEEEeCC
Q 012190 251 FGGCLALAVAARNPTIDLILILSNP 275 (468)
Q Consensus 251 ~GG~ia~~~a~~~P~~v~~lVli~p 275 (468)
.||.-++.+|..+|+ |+++||-+.
T Consensus 320 IGGF~~~waAs~YPd-VkavvLDAt 343 (517)
T KOG1553|consen 320 IGGFPVAWAASNYPD-VKAVVLDAT 343 (517)
T ss_pred cCCchHHHHhhcCCC-ceEEEeecc
Confidence 999999999999986 888888654
No 148
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.17 E-value=4.2e-05 Score=77.72 Aligned_cols=99 Identities=23% Similarity=0.224 Sum_probs=76.0
Q ss_pred CCCCeEEEeCCCCCchh---hH-----HHhHhhh-cCCeEEEEecCCCCCC---------------CChHHHHHHHHHHH
Q 012190 177 KGSPTLLFLPGIDGLGL---GL-----ILHHKPL-GKAFEVRCLHIPVYDR---------------TPFEGLVKFVEETV 232 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~~---~~-----~~~~~~L-~~~~~V~~~D~~G~G~---------------Ss~~~~~~dl~~~i 232 (468)
++-|+++++=|.++... .| .++ ..| +.||-|+++|-||--. -+++|.++-+.-+.
T Consensus 640 kkYptvl~VYGGP~VQlVnnsfkgi~ylR~-~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~La 718 (867)
T KOG2281|consen 640 KKYPTVLNVYGGPGVQLVNNSFKGIQYLRF-CRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLA 718 (867)
T ss_pred CCCceEEEEcCCCceEEeeccccceehhhh-hhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHH
Confidence 35789999999877644 22 222 234 6799999999998532 25889999888888
Q ss_pred HHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 233 RREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 233 ~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
++.+ -..-.+|.+-|+|+||.+++...+++|+.++..|.-+|.+
T Consensus 719 eq~g-fidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT 762 (867)
T KOG2281|consen 719 EQTG-FIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVT 762 (867)
T ss_pred HhcC-cccchheeEeccccccHHHHHHhhcCcceeeEEeccCcce
Confidence 8764 1234589999999999999999999999998888766644
No 149
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.12 E-value=9.3e-05 Score=66.95 Aligned_cols=79 Identities=22% Similarity=0.116 Sum_probs=53.8
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhhcCCeE-EEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHH
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFE-VRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLAL 257 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~~~~-V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~ 257 (468)
+..|||..|+|.....+.++. +..++. ++|+|+|..... . + + ...+.|.|||+|||-.+|.
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~--~~~~~D~l~~yDYr~l~~d----~--~----~------~~y~~i~lvAWSmGVw~A~ 72 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLI--LPENYDVLICYDYRDLDFD----F--D----L------SGYREIYLVAWSMGVWAAN 72 (213)
T ss_pred CeEEEEEecCCCChHHhhhcc--CCCCccEEEEecCcccccc----c--c----c------ccCceEEEEEEeHHHHHHH
Confidence 458999999999998887654 233444 467888854321 0 1 1 1345899999999999988
Q ss_pred HHHHhCCCCceEEEEeCCCC
Q 012190 258 AVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 258 ~~a~~~P~~v~~lVli~p~~ 277 (468)
.+.... .++..|.+++..
T Consensus 73 ~~l~~~--~~~~aiAINGT~ 90 (213)
T PF04301_consen 73 RVLQGI--PFKRAIAINGTP 90 (213)
T ss_pred HHhccC--CcceeEEEECCC
Confidence 876654 356677777644
No 150
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.12 E-value=8.8e-05 Score=70.71 Aligned_cols=86 Identities=19% Similarity=0.127 Sum_probs=66.8
Q ss_pred CCCeEEEeCCCCCchhhHH------HhHhhh--cCCeEEEEecCCCCCCC----ChHHHHHHHHHHHHHHhhcC---CCC
Q 012190 178 GSPTLLFLPGIDGLGLGLI------LHHKPL--GKAFEVRCLHIPVYDRT----PFEGLVKFVEETVRREHASS---PEK 242 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~------~~~~~L--~~~~~V~~~D~~G~G~S----s~~~~~~dl~~~i~~~~~~~---~~~ 242 (468)
+...||+.-|.++.-+... ..+..+ ..+.+|+.+.+||.|.| +.++++++-.+.++.+..+. ..+
T Consensus 136 ~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G~~s~~dLv~~~~a~v~yL~d~~~G~ka~ 215 (365)
T PF05677_consen 136 PQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTGPPSRKDLVKDYQACVRYLRDEEQGPKAK 215 (365)
T ss_pred CCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCCCCCHHHHHHHHHHHHHHHHhcccCCChh
Confidence 4679999999887776511 223333 34689999999999988 47899999999999887532 347
Q ss_pred cEEEEEeChhHHHHHHHHHhC
Q 012190 243 PIYLVGDSFGGCLALAVAARN 263 (468)
Q Consensus 243 ~i~LvGhS~GG~ia~~~a~~~ 263 (468)
.|++.|||+||.++...+.++
T Consensus 216 ~Ii~yG~SLGG~Vqa~AL~~~ 236 (365)
T PF05677_consen 216 NIILYGHSLGGGVQAEALKKE 236 (365)
T ss_pred eEEEeeccccHHHHHHHHHhc
Confidence 899999999999999866665
No 151
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.09 E-value=3.6e-05 Score=68.40 Aligned_cols=100 Identities=14% Similarity=0.109 Sum_probs=77.2
Q ss_pred CeEEEeCCCCCchh---hHHHhHhhh-cCCeEEEEecC----CCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeCh
Q 012190 180 PTLLFLPGIDGLGL---GLILHHKPL-GKAFEVRCLHI----PVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSF 251 (468)
Q Consensus 180 p~lV~lHG~~~s~~---~~~~~~~~L-~~~~~V~~~D~----~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~ 251 (468)
-.|||+-|++..-. ....+..+| ..+|.++-+-+ -|+|.+++.+-++|+..+++++....-...|+|+|||.
T Consensus 37 ~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~slk~D~edl~~l~~Hi~~~~fSt~vVL~GhST 116 (299)
T KOG4840|consen 37 VKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSLKDDVEDLKCLLEHIQLCGFSTDVVLVGHST 116 (299)
T ss_pred EEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccccccccccccHHHHHHHHHHhhccCcccceEEEecCc
Confidence 46899999887755 345566777 66788887765 48899999999999999999876544456899999999
Q ss_pred hHHHHHHHHHh--CCCCceEEEEeCCCCCC
Q 012190 252 GGCLALAVAAR--NPTIDLILILSNPATSF 279 (468)
Q Consensus 252 GG~ia~~~a~~--~P~~v~~lVli~p~~~~ 279 (468)
|+.=.+.+..+ .|..+.+.|+.+|....
T Consensus 117 GcQdi~yYlTnt~~~r~iraaIlqApVSDr 146 (299)
T KOG4840|consen 117 GCQDIMYYLTNTTKDRKIRAAILQAPVSDR 146 (299)
T ss_pred cchHHHHHHHhccchHHHHHHHHhCccchh
Confidence 99988888733 45678888888876643
No 152
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.09 E-value=9.8e-06 Score=74.68 Aligned_cols=84 Identities=17% Similarity=0.216 Sum_probs=49.9
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcC---CeEEEEecCCCC---C-CC--ChHHHHHHHHHHHHHHhhcCCC--CcEEE
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGK---AFEVRCLHIPVY---D-RT--PFEGLVKFVEETVRREHASSPE--KPIYL 246 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~---~~~V~~~D~~G~---G-~S--s~~~~~~dl~~~i~~~~~~~~~--~~i~L 246 (468)
+...|||+||+.|+...|..+...+.. .+.-..+...++ . .+ +++..++.+.+-+......... .+|.+
T Consensus 3 ~~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~Isf 82 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFKTFDGIDVCGERLAEEILEHIKDYESKIRKISF 82 (217)
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccccchhhHHHHHHHHHHHHHhccccccccccceE
Confidence 355899999999999998877666633 221111111111 1 11 3555555544433333322333 48999
Q ss_pred EEeChhHHHHHHHHH
Q 012190 247 VGDSFGGCLALAVAA 261 (468)
Q Consensus 247 vGhS~GG~ia~~~a~ 261 (468)
|||||||.++-.+..
T Consensus 83 IgHSLGGli~r~al~ 97 (217)
T PF05057_consen 83 IGHSLGGLIARYALG 97 (217)
T ss_pred EEecccHHHHHHHHH
Confidence 999999999764443
No 153
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.05 E-value=3.2e-05 Score=74.09 Aligned_cols=100 Identities=19% Similarity=0.174 Sum_probs=75.0
Q ss_pred CCCeEEEeCCCCCchhh----HHHhHhhhcCCeEEEEecCCCCCCC--------ChHHHHHHHHHHHHHHhhcCCCCcEE
Q 012190 178 GSPTLLFLPGIDGLGLG----LILHHKPLGKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIY 245 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~----~~~~~~~L~~~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~~~~~~~~~~~i~ 245 (468)
++..+||+||+..+-.. ...+..........+.+.+|..|.- +.+.-..+++.+++.+....+.++|+
T Consensus 115 ~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I~ 194 (377)
T COG4782 115 AKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRIY 194 (377)
T ss_pred CCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceEE
Confidence 57799999999887663 2233344455678888999877643 46666778888888888777789999
Q ss_pred EEEeChhHHHHHHHHHh--------CCCCceEEEEeCCCC
Q 012190 246 LVGDSFGGCLALAVAAR--------NPTIDLILILSNPAT 277 (468)
Q Consensus 246 LvGhS~GG~ia~~~a~~--------~P~~v~~lVli~p~~ 277 (468)
|++||||..++++.... .+.+++-+||.+|-.
T Consensus 195 ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDi 234 (377)
T COG4782 195 LLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDI 234 (377)
T ss_pred EEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCC
Confidence 99999999999877754 245677788877644
No 154
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.02 E-value=0.00028 Score=71.27 Aligned_cols=113 Identities=15% Similarity=0.060 Sum_probs=66.6
Q ss_pred eeeeecCCCCCCCCCCeEEEeCCCCCchh-hHHHhHhhh-cCC----eEEEEecCCC-CCCC----C----hHHHHHHHH
Q 012190 165 RWFCPVDCGRPLKGSPTLLFLPGIDGLGL-GLILHHKPL-GKA----FEVRCLHIPV-YDRT----P----FEGLVKFVE 229 (468)
Q Consensus 165 ~~~~y~~~g~~~~~~p~lV~lHG~~~s~~-~~~~~~~~L-~~~----~~V~~~D~~G-~G~S----s----~~~~~~dl~ 229 (468)
+..-|.+.+-..+.-|+|+++||-.-... .....+..| ..+ .-++.+|... ..++ . .+.+++++.
T Consensus 195 ~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~~~~~f~~~l~~eLl 274 (411)
T PRK10439 195 RVWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELPCNADFWLAVQQELL 274 (411)
T ss_pred EEEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCCchHHHHHHHHHHHH
Confidence 34444444321235789999999542111 112223333 332 3456676532 1121 1 233445555
Q ss_pred HHHHHHhh-cCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 230 ETVRREHA-SSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 230 ~~i~~~~~-~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
-++++... ....++.+|.|+||||..|+.++.++|+.+.+++.+++..
T Consensus 275 P~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 275 PQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 55555321 1234578899999999999999999999999999998754
No 155
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.99 E-value=4.4e-05 Score=69.33 Aligned_cols=98 Identities=12% Similarity=0.018 Sum_probs=75.1
Q ss_pred CeEEEeCCCCCchhhHHHhHhhhcCCeE------EEEecCCCC----------------------CCCChHHHHHHHHHH
Q 012190 180 PTLLFLPGIDGLGLGLILHHKPLGKAFE------VRCLHIPVY----------------------DRTPFEGLVKFVEET 231 (468)
Q Consensus 180 p~lV~lHG~~~s~~~~~~~~~~L~~~~~------V~~~D~~G~----------------------G~Ss~~~~~~dl~~~ 231 (468)
-|.||+||++|+...+...+..|...++ +..+|--|- ++.+..++...+..+
T Consensus 46 iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ 125 (288)
T COG4814 46 IPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKA 125 (288)
T ss_pred cceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHH
Confidence 3689999999999999999988855442 334444431 122467788889999
Q ss_pred HHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCC-----CceEEEEeCCCC
Q 012190 232 VRREHASSPEKPIYLVGDSFGGCLALAVAARNPT-----IDLILILSNPAT 277 (468)
Q Consensus 232 i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~-----~v~~lVli~p~~ 277 (468)
+..+.....-.++.++||||||.-...++..+.. .+..+|.++..+
T Consensus 126 msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpf 176 (288)
T COG4814 126 MSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPF 176 (288)
T ss_pred HHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccc
Confidence 9998888888899999999999999999987532 477888887655
No 156
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.98 E-value=7.3e-05 Score=69.76 Aligned_cols=117 Identities=22% Similarity=0.208 Sum_probs=79.3
Q ss_pred CCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhH--hhh--cCCeEEEEecC-C------CCCCC----C---h
Q 012190 160 DGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHH--KPL--GKAFEVRCLHI-P------VYDRT----P---F 221 (468)
Q Consensus 160 dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~--~~L--~~~~~V~~~D~-~------G~G~S----s---~ 221 (468)
+|..+.+..|.+.+.+ .+.|.||++||.++++..+.... ..| ..+|-|..+|- + +++.+ + -
T Consensus 43 ~g~~r~y~l~vP~g~~-~~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g 121 (312)
T COG3509 43 NGLKRSYRLYVPPGLP-SGAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRG 121 (312)
T ss_pred CCCccceEEEcCCCCC-CCCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccCC
Confidence 3444455556666664 34589999999999999877655 666 34688888752 1 22222 1 1
Q ss_pred HHHHHHHHHHHHHHhhcCC--CCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 222 EGLVKFVEETVRREHASSP--EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 222 ~~~~~dl~~~i~~~~~~~~--~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
-+-+..|.+++..+..+.. ..+|++.|.|-||.++..++..+|+.+.++..++...
T Consensus 122 ~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 122 VDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred ccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 1233444444444444343 4589999999999999999999999999888877644
No 157
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=97.96 E-value=0.00044 Score=64.76 Aligned_cols=61 Identities=15% Similarity=0.209 Sum_probs=49.9
Q ss_pred ccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC----CcEEEEeCCCCcccccc-CcHHHHHHHHhcCcc
Q 012190 376 HAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLE-EGISLLTIIKGTCKY 439 (468)
Q Consensus 376 ~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~----~~~~~~i~~aGH~~~~e-~p~~~~~~I~~~~F~ 439 (468)
...++|-|+|+++.|.+++.+ +.++..+... +++.+.+++++|..|+. +|++..+++. +||
T Consensus 175 ~~~~~p~lylYS~~D~l~~~~-~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~--~fw 240 (240)
T PF05705_consen 175 SPSRCPRLYLYSKADPLIPWR-DVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVD--EFW 240 (240)
T ss_pred CCCCCCeEEecCCCCcCcCHH-HHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHH--hhC
Confidence 455799999999999999998 6777765543 46788899999998885 8999999998 554
No 158
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.94 E-value=2.5e-05 Score=76.82 Aligned_cols=99 Identities=14% Similarity=0.059 Sum_probs=72.4
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhh-cCCeE---EEEecCCCCCCC-ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhH
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFE---VRCLHIPVYDRT-PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGG 253 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~---V~~~D~~G~G~S-s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG 253 (468)
.-++|++||++.+...|..+...+ ..++. ++++++++-... +.....+.+...++......+.+++.|+||||||
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ql~~~V~~~l~~~ga~~v~LigHS~GG 138 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGDGTYSLAVRGEQLFAYVDEVLAKTGAKKVNLIGHSMGG 138 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccCCCccccccHHHHHHHHHHHHhhcCCCceEEEeecccc
Confidence 337999999988888888877777 34455 888888855222 3333344444444444444666799999999999
Q ss_pred HHHHHHHHhCC--CCceEEEEeCCCC
Q 012190 254 CLALAVAARNP--TIDLILILSNPAT 277 (468)
Q Consensus 254 ~ia~~~a~~~P--~~v~~lVli~p~~ 277 (468)
.++..++...+ .+|+.++.++++-
T Consensus 139 ~~~ry~~~~~~~~~~V~~~~tl~tp~ 164 (336)
T COG1075 139 LDSRYYLGVLGGANRVASVVTLGTPH 164 (336)
T ss_pred hhhHHHHhhcCccceEEEEEEeccCC
Confidence 99999999888 8899999988754
No 159
>PLN02606 palmitoyl-protein thioesterase
Probab=97.92 E-value=0.00047 Score=65.32 Aligned_cols=96 Identities=10% Similarity=0.071 Sum_probs=66.3
Q ss_pred CCeEEEeCCCC--CchhhHHHhHhhhc--CCeEEEEecCCCCCC-C----ChHHHHHHHHHHHHHHhhcCCCCcEEEEEe
Q 012190 179 SPTLLFLPGID--GLGLGLILHHKPLG--KAFEVRCLHIPVYDR-T----PFEGLVKFVEETVRREHASSPEKPIYLVGD 249 (468)
Q Consensus 179 ~p~lV~lHG~~--~s~~~~~~~~~~L~--~~~~V~~~D~~G~G~-S----s~~~~~~dl~~~i~~~~~~~~~~~i~LvGh 249 (468)
..|||+.||++ ++...+..+.+.+. .++.+.++. .|-|. + .+.+.++.+.+.+..... + ..-++++|+
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~~s~~~~~~~Qv~~vce~l~~~~~-L-~~G~naIGf 102 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQDSLFMPLRQQASIACEKIKQMKE-L-SEGYNIVAE 102 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCcccccccCHHHHHHHHHHHHhcchh-h-cCceEEEEE
Confidence 44799999999 55556767666664 255444444 33344 2 345666666666665222 2 236999999
Q ss_pred ChhHHHHHHHHHhCCC--CceEEEEeCCCC
Q 012190 250 SFGGCLALAVAARNPT--IDLILILSNPAT 277 (468)
Q Consensus 250 S~GG~ia~~~a~~~P~--~v~~lVli~p~~ 277 (468)
|.||.++-.++.+.|+ .|+.+|-++++.
T Consensus 103 SQGglflRa~ierc~~~p~V~nlISlggph 132 (306)
T PLN02606 103 SQGNLVARGLIEFCDNAPPVINYVSLGGPH 132 (306)
T ss_pred cchhHHHHHHHHHCCCCCCcceEEEecCCc
Confidence 9999999999999877 599999988754
No 160
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=97.90 E-value=4.6e-05 Score=74.18 Aligned_cols=97 Identities=15% Similarity=0.008 Sum_probs=57.0
Q ss_pred CCCeEEEeCCCCCchhhHH------------------HhHhhh-cCCeEEEEecCCCCCCCC------------h-----
Q 012190 178 GSPTLLFLPGIDGLGLGLI------------------LHHKPL-GKAFEVRCLHIPVYDRTP------------F----- 221 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~------------------~~~~~L-~~~~~V~~~D~~G~G~Ss------------~----- 221 (468)
.-|.||++||-++...... .....| .+||-|+++|.+|+|+.. .
T Consensus 114 p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~ 193 (390)
T PF12715_consen 114 PFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALAR 193 (390)
T ss_dssp -EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHH
T ss_pred CCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHH
Confidence 4789999999988764321 123455 568999999999998541 0
Q ss_pred ----------HHHHHHHHHHHHHHhhc--CCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCC
Q 012190 222 ----------EGLVKFVEETVRREHAS--SPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNP 275 (468)
Q Consensus 222 ----------~~~~~dl~~~i~~~~~~--~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p 275 (468)
...+-|....++.+... ...++|.++|+||||..++.+|+.. ++|++.|..+-
T Consensus 194 ~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~ 258 (390)
T PF12715_consen 194 NLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANGY 258 (390)
T ss_dssp HHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-
T ss_pred HHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhhh
Confidence 11122223344444322 2356899999999999999999987 68888877653
No 161
>COG3150 Predicted esterase [General function prediction only]
Probab=97.85 E-value=0.0003 Score=59.92 Aligned_cols=86 Identities=21% Similarity=0.234 Sum_probs=61.2
Q ss_pred EEEeCCCCCchhhHHHhH--hhhcCC---eEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHH
Q 012190 182 LLFLPGIDGLGLGLILHH--KPLGKA---FEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLA 256 (468)
Q Consensus 182 lV~lHG~~~s~~~~~~~~--~~L~~~---~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia 256 (468)
||++|||.+|........ +.+... ....++.+| .+....++.++.++.+. ..+...|+|-|+||..|
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~~~~i~y~~p~l~----h~p~~a~~ele~~i~~~----~~~~p~ivGssLGGY~A 73 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDEDVRDIEYSTPHLP----HDPQQALKELEKAVQEL----GDESPLIVGSSLGGYYA 73 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhccccceeeecCCCC----CCHHHHHHHHHHHHHHc----CCCCceEEeecchHHHH
Confidence 799999999988776532 344332 344444444 34678888888888874 44457899999999999
Q ss_pred HHHHHhCCCCceEEEEeCCCCC
Q 012190 257 LAVAARNPTIDLILILSNPATS 278 (468)
Q Consensus 257 ~~~a~~~P~~v~~lVli~p~~~ 278 (468)
.+++.++ .++ .|+++|+..
T Consensus 74 t~l~~~~--Gir-av~~NPav~ 92 (191)
T COG3150 74 TWLGFLC--GIR-AVVFNPAVR 92 (191)
T ss_pred HHHHHHh--CCh-hhhcCCCcC
Confidence 9999997 343 566677553
No 162
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.83 E-value=3.7e-05 Score=72.49 Aligned_cols=111 Identities=20% Similarity=0.182 Sum_probs=68.1
Q ss_pred eecCCC-CCCCCCCeEEEeCCCCCchhhH--HHhHhhh-cC----CeEEEEecCCCCC-----------------CC---
Q 012190 168 CPVDCG-RPLKGSPTLLFLPGIDGLGLGL--ILHHKPL-GK----AFEVRCLHIPVYD-----------------RT--- 219 (468)
Q Consensus 168 ~y~~~g-~~~~~~p~lV~lHG~~~s~~~~--~~~~~~L-~~----~~~V~~~D~~G~G-----------------~S--- 219 (468)
-|.+.+ .+.+.-|+|+++||.......+ ...+..+ .+ ..-+++++..+.+ ..
T Consensus 12 VylP~~y~~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (251)
T PF00756_consen 12 VYLPPGYDPSKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRRADDSGGG 91 (251)
T ss_dssp EEECTTGGTTTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCBCTSTTTH
T ss_pred EEECCCCCCCCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccccccCCCC
Confidence 344443 2334578999999982222222 2223333 22 1445666654444 00
Q ss_pred -Ch-HHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCC
Q 012190 220 -PF-EGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSF 279 (468)
Q Consensus 220 -s~-~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~ 279 (468)
.+ +.+.++|...|+......+.+ ..++|+||||..|+.++.+||+.+.++++++|....
T Consensus 92 ~~~~~~l~~el~p~i~~~~~~~~~~-~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 92 DAYETFLTEELIPYIEANYRTDPDR-RAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDP 152 (251)
T ss_dssp HHHHHHHHTHHHHHHHHHSSEEECC-EEEEEETHHHHHHHHHHHHSTTTESEEEEESEESET
T ss_pred cccceehhccchhHHHHhcccccce-eEEeccCCCcHHHHHHHHhCccccccccccCccccc
Confidence 12 334456666666644322222 799999999999999999999999999999986543
No 163
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.78 E-value=0.00034 Score=68.55 Aligned_cols=115 Identities=22% Similarity=0.175 Sum_probs=76.0
Q ss_pred eeeeecCCCCCCCCCCeEEEeCCCCCchhhHH-------HhHhhhcCCeEEEEecCCCCC----CCChHHHHHHHHHHHH
Q 012190 165 RWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLI-------LHHKPLGKAFEVRCLHIPVYD----RTPFEGLVKFVEETVR 233 (468)
Q Consensus 165 ~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~-------~~~~~L~~~~~V~~~D~~G~G----~Ss~~~~~~dl~~~i~ 233 (468)
.|+.-.+.....++.|+||++||.|....... .+...|. ...++++|+.-.. ...+.....++.+..+
T Consensus 108 ~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~ 186 (374)
T PF10340_consen 108 YWLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYD 186 (374)
T ss_pred EEEEeCCcccCCCCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccccccCCCcCchHHHHHHHHHH
Confidence 67654333321234699999999876654222 2223344 5588888886444 3345666666666666
Q ss_pred HHhhcCCCCcEEEEEeChhHHHHHHHHHhCC-----CCceEEEEeCCCCCCC
Q 012190 234 REHASSPEKPIYLVGDSFGGCLALAVAARNP-----TIDLILILSNPATSFG 280 (468)
Q Consensus 234 ~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P-----~~v~~lVli~p~~~~~ 280 (468)
++....+.+.|+|+|-|.||.+++.+..... ..-+++||++|+....
T Consensus 187 ~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 187 YLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred HHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 6664457789999999999999998775421 2246899999988665
No 164
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.71 E-value=0.00027 Score=72.41 Aligned_cols=99 Identities=22% Similarity=0.231 Sum_probs=67.6
Q ss_pred CCCeEEEeCCCCCchhh-H--HHhHhhhcC--CeEEEEecCCCCCCC--------------ChHHHHHHHHHHHHHHhhc
Q 012190 178 GSPTLLFLPGIDGLGLG-L--ILHHKPLGK--AFEVRCLHIPVYDRT--------------PFEGLVKFVEETVRREHAS 238 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~-~--~~~~~~L~~--~~~V~~~D~~G~G~S--------------s~~~~~~dl~~~i~~~~~~ 238 (468)
++|++|++ |.-+.... + ..++..|++ +--++++++|-+|.| +.++..+|+..+++++...
T Consensus 28 ~gpifl~~-ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~ 106 (434)
T PF05577_consen 28 GGPIFLYI-GGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKK 106 (434)
T ss_dssp TSEEEEEE---SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEE-CCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHh
Confidence 35655555 44444432 2 224445533 578999999999998 4788889999999888854
Q ss_pred C---CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 239 S---PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 239 ~---~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
. ...|++++|-|+||++|..+-.+||+.+.|.+..+++.
T Consensus 107 ~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv 148 (434)
T PF05577_consen 107 YNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPV 148 (434)
T ss_dssp TTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--C
T ss_pred hcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEecccee
Confidence 3 35699999999999999999999999999999988766
No 165
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.61 E-value=0.00035 Score=72.91 Aligned_cols=99 Identities=16% Similarity=0.165 Sum_probs=62.5
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhh-----------------cCCeEEEEecCCC-----CCCCChHHHHHHHHHHHHHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPL-----------------GKAFEVRCLHIPV-----YDRTPFEGLVKFVEETVRRE 235 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L-----------------~~~~~V~~~D~~G-----~G~Ss~~~~~~dl~~~i~~~ 235 (468)
++-||+|++|..|+....+.++..- ...|+.++.|+-+ ||+ ++.+.++.+.+.|+..
T Consensus 88 sGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~tAm~G~-~l~dQtEYV~dAIk~I 166 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFTAMHGH-ILLDQTEYVNDAIKYI 166 (973)
T ss_pred CCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhhhhccH-hHHHHHHHHHHHHHHH
Confidence 3557999999999988766554322 1246777777643 333 4666666666666654
Q ss_pred hhcCC---------CCcEEEEEeChhHHHHHHHHHh---CCCCceEEEEeCCCC
Q 012190 236 HASSP---------EKPIYLVGDSFGGCLALAVAAR---NPTIDLILILSNPAT 277 (468)
Q Consensus 236 ~~~~~---------~~~i~LvGhS~GG~ia~~~a~~---~P~~v~~lVli~p~~ 277 (468)
..... .+.|+|+||||||.+|...+.. .+..|.-++..+.+.
T Consensus 167 LslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH 220 (973)
T KOG3724|consen 167 LSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPH 220 (973)
T ss_pred HHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcc
Confidence 43211 3459999999999999865543 234454455555443
No 166
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=97.55 E-value=0.003 Score=59.48 Aligned_cols=96 Identities=16% Similarity=0.057 Sum_probs=53.9
Q ss_pred CCeEEEeCCCCCchh---hHHH---hHhhhcCCeEEEEecCCCCCCC---------ChHHHHHHHHHHHHHHhhcCCCCc
Q 012190 179 SPTLLFLPGIDGLGL---GLIL---HHKPLGKAFEVRCLHIPVYDRT---------PFEGLVKFVEETVRREHASSPEKP 243 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~---~~~~---~~~~L~~~~~V~~~D~~G~G~S---------s~~~~~~dl~~~i~~~~~~~~~~~ 243 (468)
..|||+.||+|.+.. .+.. +++..-.+--|.+++. |.+.+ .+.+.++.+.+.++..... ..-
T Consensus 5 ~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~i-g~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L--~~G 81 (279)
T PF02089_consen 5 PLPVVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEI-GNDPSEDVENSFFGNVNDQVEQVCEQLANDPEL--ANG 81 (279)
T ss_dssp S--EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--S-SSSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGG--TT-
T ss_pred CCcEEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEE-CCCcchhhhhhHHHHHHHHHHHHHHHHhhChhh--hcc
Confidence 447999999997642 3333 4444445677777776 33321 2456666666666652221 246
Q ss_pred EEEEEeChhHHHHHHHHHhCCC-CceEEEEeCCCC
Q 012190 244 IYLVGDSFGGCLALAVAARNPT-IDLILILSNPAT 277 (468)
Q Consensus 244 i~LvGhS~GG~ia~~~a~~~P~-~v~~lVli~p~~ 277 (468)
++++|+|.||.++-.++.+.|+ .|..+|.++++.
T Consensus 82 ~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph 116 (279)
T PF02089_consen 82 FNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPH 116 (279)
T ss_dssp EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--T
T ss_pred eeeeeeccccHHHHHHHHHCCCCCceeEEEecCcc
Confidence 9999999999999999999864 699999988754
No 167
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=97.54 E-value=0.00098 Score=68.73 Aligned_cols=203 Identities=20% Similarity=0.239 Sum_probs=116.1
Q ss_pred CCCeEEEeCCCCCchh--hHHHhHhhh-cCCeEEEEecCCCCCCC---------------ChHHHHHHHHHHHHHHhhcC
Q 012190 178 GSPTLLFLPGIDGLGL--GLILHHKPL-GKAFEVRCLHIPVYDRT---------------PFEGLVKFVEETVRREHASS 239 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~--~~~~~~~~L-~~~~~V~~~D~~G~G~S---------------s~~~~~~dl~~~i~~~~~~~ 239 (468)
++|+++..=|.-|... .|....-.| .+|+---.-+.||=|.- ++.|+.+....++++-..
T Consensus 447 ~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~-- 524 (682)
T COG1770 447 SAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGYT-- 524 (682)
T ss_pred CCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHHHHHcCcC--
Confidence 4676666555544433 233222233 55554444566776532 688888887777776321
Q ss_pred CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCcCcchHHHhhCchhHHhhHHHHhhhhcCChhhHHHH
Q 012190 240 PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQLQPLFPILKAMPDELHCAVPYLLSYVMGDPIKMAMV 319 (468)
Q Consensus 240 ~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (468)
..+.++++|-|.||+++-..+...|+.+.++|+--|...+-...+....++-. ..+ ...++|..
T Consensus 525 ~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~slPLT~-------~E~-----~EWGNP~d---- 588 (682)
T COG1770 525 SPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSLPLTV-------TEW-----DEWGNPLD---- 588 (682)
T ss_pred CccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCCCCCc-------cch-----hhhCCcCC----
Confidence 24589999999999999999999999999999987765443222211111000 000 01122211
Q ss_pred hhccCCChhHHhhhhhhhcchhcchhhhhhccCCcchhHHHHHHHHHHhHHHhhhc-ccCCceEEEEEeCCCCCCCcHHH
Q 012190 320 NIENRLPPRIKLEQLSNNLPALLPRLSVMSDIIPKDTLLWKLKLLKSASAYANSRL-HAVKAEVLVLASGKDNMLPSEDE 398 (468)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l-~~i~~PvLlI~G~~D~~v~~~~~ 398 (468)
++. ...+++...+ +.+ ++---|+|++.|.+|+.|... +
T Consensus 589 ------------~e~--------------------------y~yikSYSPY--dNV~a~~YP~ilv~~Gl~D~rV~Yw-E 627 (682)
T COG1770 589 ------------PEY--------------------------YDYIKSYSPY--DNVEAQPYPAILVTTGLNDPRVQYW-E 627 (682)
T ss_pred ------------HHH--------------------------HHHHhhcCch--hccccCCCCceEEEccccCCccccc-h
Confidence 011 1111111111 111 223357999999999999988 4
Q ss_pred HHHHHHhCC----Cc---EEEEeCCCCccccccCcHHHHHHHHhcCcc
Q 012190 399 AKRLNNSLQ----NC---IVRNFKDNGHTLLLEEGISLLTIIKGTCKY 439 (468)
Q Consensus 399 ~~~l~~~l~----~~---~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~ 439 (468)
..++.+.+. +. -+.+=.++||...-.+.+...+.-.+..|.
T Consensus 628 pAKWvAkLR~~~td~~plLlkt~M~aGHgG~SgRf~~lee~A~eYaF~ 675 (682)
T COG1770 628 PAKWVAKLRELKTDGNPLLLKTNMDAGHGGASGRFQRLEEIAFEYAFL 675 (682)
T ss_pred HHHHHHHHhhcccCCCcEEEEecccccCCCCCCchHHHHHHHHHHHHH
Confidence 555555442 22 222225799988888877777766655554
No 168
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=97.51 E-value=0.0016 Score=66.88 Aligned_cols=127 Identities=13% Similarity=-0.018 Sum_probs=84.2
Q ss_pred HHhccCccCCCCCCceeeeecCCCCCCCCCCeEEEeC--CCCCch---hhHHHhHh---hh-cCCeEEEEecCCCCCCCC
Q 012190 150 LDAAKEIIKPDGGPPRWFCPVDCGRPLKGSPTLLFLP--GIDGLG---LGLILHHK---PL-GKAFEVRCLHIPVYDRTP 220 (468)
Q Consensus 150 ~~~~~~~~~~dg~~~~~~~y~~~g~~~~~~p~lV~lH--G~~~s~---~~~~~~~~---~L-~~~~~V~~~D~~G~G~Ss 220 (468)
.+....++..||..+..-.|.+.+. ...|+++..+ -+.-.. ..-....+ .+ +.+|.|+..|.||.|.|.
T Consensus 18 ~~~~v~V~MRDGvrL~~dIy~Pa~~--g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~Se 95 (563)
T COG2936 18 IERDVMVPMRDGVRLAADIYRPAGA--GPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGGSE 95 (563)
T ss_pred eeeeeeEEecCCeEEEEEEEccCCC--CCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEecccccccCC
Confidence 3344556788998877666776644 2478888888 332221 11111223 34 789999999999999993
Q ss_pred ------hHHHHHHHHHHHHHHhh-cCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCC
Q 012190 221 ------FEGLVKFVEETVRREHA-SSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATS 278 (468)
Q Consensus 221 ------~~~~~~dl~~~i~~~~~-~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~ 278 (468)
..+-++|-.++|+.+.. .-.+.+|..+|.|++|...+.+|+..|..+++++...+...
T Consensus 96 G~~~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 96 GVFDPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred cccceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 11123333333333322 23467999999999999999999999998988888776554
No 169
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.50 E-value=0.0029 Score=58.00 Aligned_cols=59 Identities=22% Similarity=0.331 Sum_probs=48.5
Q ss_pred EEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCcc-ccccCcHHHHHHHHhcCcccccCC
Q 012190 382 VLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHT-LLLEEGISLLTIIKGTCKYRRSRK 444 (468)
Q Consensus 382 vLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~-~~~e~p~~~~~~I~~~~F~~r~~~ 444 (468)
+.++.+++|.++|.. ....+.+..|++++..++ .||. .++-+.+.+...|. +-++|..+
T Consensus 309 ~ivv~A~~D~Yipr~-gv~~lQ~~WPg~eVr~~e-gGHVsayl~k~dlfRR~I~--d~L~R~~k 368 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRT-GVRSLQEIWPGCEVRYLE-GGHVSAYLFKQDLFRRAIV--DGLDRLDK 368 (371)
T ss_pred EEEEEecCCcccccc-CcHHHHHhCCCCEEEEee-cCceeeeehhchHHHHHHH--HHHHhhhh
Confidence 678889999999998 789999999999999999 6887 45557777888887 66666554
No 170
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=97.38 E-value=0.00078 Score=68.97 Aligned_cols=126 Identities=19% Similarity=0.260 Sum_probs=78.6
Q ss_pred HHHHhccCccCCCCCC-ceeeeecCCCCCCCCCCeEEEeCCCCCchhh----HHHhHhhh-cCCeEEEEecCCCCCCC--
Q 012190 148 DYLDAAKEIIKPDGGP-PRWFCPVDCGRPLKGSPTLLFLPGIDGLGLG----LILHHKPL-GKAFEVRCLHIPVYDRT-- 219 (468)
Q Consensus 148 ~y~~~~~~~~~~dg~~-~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~----~~~~~~~L-~~~~~V~~~D~~G~G~S-- 219 (468)
+|-.+...+...||.. |-++-|...-.-..+.|.+|. |+|+-+.. |..--..| ..|+-...-|.||=|+-
T Consensus 438 ~y~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLy--gYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~ 515 (712)
T KOG2237|consen 438 DYVVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLY--GYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGE 515 (712)
T ss_pred ceEEEEEEEecCCCCccceEEEEechhhhcCCCceEEE--EecccceeeccccccceeEEEecceEEEEEeeccCccccc
Confidence 3434444556667765 555555332221224675555 44444443 33222233 44555555688987643
Q ss_pred -------------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 220 -------------PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 220 -------------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
+++|+....+.+++.--. ...+..+.|.|.||.++.+++..+|+.+.++|+--|..
T Consensus 516 ~WHk~G~lakKqN~f~Dfia~AeyLve~gyt--~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~Vpfm 584 (712)
T KOG2237|consen 516 QWHKDGRLAKKQNSFDDFIACAEYLVENGYT--QPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFM 584 (712)
T ss_pred chhhccchhhhcccHHHHHHHHHHHHHcCCC--CccceeEecccCccchhHHHhccCchHhhhhhhcCcce
Confidence 477777777777765221 24688999999999999999999999999998866543
No 171
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.36 E-value=0.0023 Score=62.19 Aligned_cols=98 Identities=19% Similarity=0.217 Sum_probs=70.6
Q ss_pred CCeEEEeCCCCCchh---hHHHhHhhh-cCCeEEEEecCCCC--C-------------------CC-C------------
Q 012190 179 SPTLLFLPGIDGLGL---GLILHHKPL-GKAFEVRCLHIPVY--D-------------------RT-P------------ 220 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~---~~~~~~~~L-~~~~~V~~~D~~G~--G-------------------~S-s------------ 220 (468)
...||++||.+.+.+ ...++-..| ..|+.++++.+|.- . .+ +
T Consensus 87 ~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 166 (310)
T PF12048_consen 87 QGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEA 166 (310)
T ss_pred ceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHh
Confidence 558999999998864 455666777 67899999888761 1 00 0
Q ss_pred ------hHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCC-CceEEEEeCCCC
Q 012190 221 ------FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPT-IDLILILSNPAT 277 (468)
Q Consensus 221 ------~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~-~v~~lVli~p~~ 277 (468)
-+.+...+...+..... .+.++++|+||+.|+..++.+.+..+. .++++|++++..
T Consensus 167 ~~~~~~~~~~~ari~Aa~~~~~~-~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~ 229 (310)
T PF12048_consen 167 EAREAYEERLFARIEAAIAFAQQ-QGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYW 229 (310)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHh-cCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCC
Confidence 12344455555555443 356669999999999999999998764 589999999843
No 172
>PLN02633 palmitoyl protein thioesterase family protein
Probab=97.35 E-value=0.0071 Score=57.55 Aligned_cols=96 Identities=18% Similarity=0.098 Sum_probs=65.6
Q ss_pred CCeEEEeCCCCCchh--hHHHhHhhhc--CCeEEEEecCCCCCC-C----ChHHHHHHHHHHHHHHhhcCCCCcEEEEEe
Q 012190 179 SPTLLFLPGIDGLGL--GLILHHKPLG--KAFEVRCLHIPVYDR-T----PFEGLVKFVEETVRREHASSPEKPIYLVGD 249 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~--~~~~~~~~L~--~~~~V~~~D~~G~G~-S----s~~~~~~dl~~~i~~~~~~~~~~~i~LvGh 249 (468)
..|+|+.||+|.+.. ....+.+.+. .+..+.++.. |-+. + .+.+.++.+.+.+..... + ..-+++||+
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i-g~~~~~s~~~~~~~Qve~vce~l~~~~~-l-~~G~naIGf 101 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI-GNGVGDSWLMPLTQQAEIACEKVKQMKE-L-SQGYNIVGR 101 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE-CCCccccceeCHHHHHHHHHHHHhhchh-h-hCcEEEEEE
Confidence 446999999988876 3333444442 2455556554 2222 2 366777777777766322 2 236999999
Q ss_pred ChhHHHHHHHHHhCCC--CceEEEEeCCCC
Q 012190 250 SFGGCLALAVAARNPT--IDLILILSNPAT 277 (468)
Q Consensus 250 S~GG~ia~~~a~~~P~--~v~~lVli~p~~ 277 (468)
|.||.++-.++.+.|+ .|+.+|-+++..
T Consensus 102 SQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 102 SQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred ccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 9999999999999987 599999988754
No 173
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.33 E-value=0.00052 Score=55.07 Aligned_cols=60 Identities=17% Similarity=0.209 Sum_probs=49.6
Q ss_pred CceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 379 KAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 379 ~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
..|+|+|.++.|+.+|.+ .++.+.+.+++++++.+++.||..+.....=+.+++. +|+..
T Consensus 34 ~~piL~l~~~~Dp~TP~~-~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~--~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYE-GARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVD--DYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHH-HHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHH--HHHHc
Confidence 589999999999999999 7999999999999999999999999733344445555 45543
No 174
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.30 E-value=0.00087 Score=67.41 Aligned_cols=82 Identities=11% Similarity=0.062 Sum_probs=60.7
Q ss_pred hHHHhHhhhc-CCeE----EE--EecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCC-
Q 012190 194 GLILHHKPLG-KAFE----VR--CLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPT- 265 (468)
Q Consensus 194 ~~~~~~~~L~-~~~~----V~--~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~- 265 (468)
.|..+++.|. .||. +. -+|+|---. ..+++...+...|+...... ++||+||||||||.++..+....+.
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~-~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~fl~~~~~~ 143 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSPA-ERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYFLQWMPQE 143 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhchh-hHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHHHHhccch
Confidence 7889998883 3332 22 278874332 34566677777777766555 7899999999999999999988743
Q ss_pred -----CceEEEEeCCCC
Q 012190 266 -----IDLILILSNPAT 277 (468)
Q Consensus 266 -----~v~~lVli~p~~ 277 (468)
.|+++|.++++.
T Consensus 144 ~W~~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 144 EWKDKYIKRFISIGTPF 160 (389)
T ss_pred hhHHhhhhEEEEeCCCC
Confidence 599999999876
No 175
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=97.30 E-value=0.027 Score=57.04 Aligned_cols=108 Identities=19% Similarity=0.145 Sum_probs=71.3
Q ss_pred CCCCCCCCCCeEEEeCCCCCchhhHHHhHhhh-------------------cCCeEEEEecCC-CCCCC----------C
Q 012190 171 DCGRPLKGSPTLLFLPGIDGLGLGLILHHKPL-------------------GKAFEVRCLHIP-VYDRT----------P 220 (468)
Q Consensus 171 ~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L-------------------~~~~~V~~~D~~-G~G~S----------s 220 (468)
+.-......|.||.|.|.+|++... .+..++ .+..+++-+|.| |-|.| +
T Consensus 65 eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~~ 143 (454)
T KOG1282|consen 65 ESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKTG 143 (454)
T ss_pred EccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCCcCCccccCCCCcCcCC
Confidence 3333335689999999999887644 333333 123567788887 66655 2
Q ss_pred hHHHHHHHHHHHHHHhhcCC---CCcEEEEEeChhHHHHHHHHHh----C------CCCceEEEEeCCCCCC
Q 012190 221 FEGLVKFVEETVRREHASSP---EKPIYLVGDSFGGCLALAVAAR----N------PTIDLILILSNPATSF 279 (468)
Q Consensus 221 ~~~~~~dl~~~i~~~~~~~~---~~~i~LvGhS~GG~ia~~~a~~----~------P~~v~~lVli~p~~~~ 279 (468)
-+..++|+..++.....++| .++++|.|.|++|...-.+|.+ + +-.++|+++-+|....
T Consensus 144 D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~ 215 (454)
T KOG1282|consen 144 DDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDP 215 (454)
T ss_pred cHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCcccCc
Confidence 34556666666665554444 6899999999999776666643 2 1357889988887643
No 176
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.27 E-value=0.0063 Score=60.01 Aligned_cols=36 Identities=28% Similarity=0.248 Sum_probs=31.1
Q ss_pred CcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 242 KPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 242 ~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
.|++++|+|.||.+|..+|.-.|..+++++=-+++.
T Consensus 184 lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~ 219 (403)
T PF11144_consen 184 LPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYA 219 (403)
T ss_pred CcEEEEecCcHHHHHHHHHhhCccceeEEEecCccc
Confidence 589999999999999999999999998887655443
No 177
>KOG3101 consensus Esterase D [General function prediction only]
Probab=97.22 E-value=0.0023 Score=56.73 Aligned_cols=107 Identities=16% Similarity=0.196 Sum_probs=72.8
Q ss_pred CCCeEEEeCCCCCchhhHHH--hHhhh--cCCeEEEEecC--CCCC-----CC-------------C----------hHH
Q 012190 178 GSPTLLFLPGIDGLGLGLIL--HHKPL--GKAFEVRCLHI--PVYD-----RT-------------P----------FEG 223 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~--~~~~L--~~~~~V~~~D~--~G~G-----~S-------------s----------~~~ 223 (468)
.-|++.++-|+.+....|.. -.+.. ..++.|+.+|- ||.. +| + .+.
T Consensus 43 ~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdY 122 (283)
T KOG3101|consen 43 RCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDY 122 (283)
T ss_pred cCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHH
Confidence 36899999999999886643 22222 44688888884 4431 12 1 344
Q ss_pred HHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCc
Q 012190 224 LVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFGRSQL 284 (468)
Q Consensus 224 ~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~~~~~ 284 (468)
.++.+-+++..-.......++.+.||||||.=|+-.+.++|.+.+++-..+|...+..-+|
T Consensus 123 v~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~cpW 183 (283)
T KOG3101|consen 123 VVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINCPW 183 (283)
T ss_pred HHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcccCcc
Confidence 4555555555433333455789999999999999999999999999888887654443333
No 178
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.20 E-value=0.001 Score=57.60 Aligned_cols=56 Identities=21% Similarity=0.232 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCC----CceEEEEeCCCC
Q 012190 222 EGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPT----IDLILILSNPAT 277 (468)
Q Consensus 222 ~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~----~v~~lVli~p~~ 277 (468)
..+.+.+...++......+..+++++|||+||.+|..++...+. ....++..+++.
T Consensus 8 ~~~~~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 8 RSLANLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 34455566666655544577899999999999999998887654 456677766644
No 179
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=97.17 E-value=0.082 Score=53.84 Aligned_cols=103 Identities=26% Similarity=0.268 Sum_probs=66.3
Q ss_pred CCCCCeEEEeCCCCCchhhHHH---hHh-------------hh-------cCCeEEEEecCC-CCCCCC---------hH
Q 012190 176 LKGSPTLLFLPGIDGLGLGLIL---HHK-------------PL-------GKAFEVRCLHIP-VYDRTP---------FE 222 (468)
Q Consensus 176 ~~~~p~lV~lHG~~~s~~~~~~---~~~-------------~L-------~~~~~V~~~D~~-G~G~Ss---------~~ 222 (468)
....|+|+.+.|.+|++..+.. ..+ .| .+..+++-+|.| |.|.|. -+
T Consensus 63 ~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~~d~ 142 (433)
T PLN03016 63 PKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKTGDI 142 (433)
T ss_pred cccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCccCCH
Confidence 3568999999999888773321 111 11 234788889954 777661 11
Q ss_pred HHHHHHHHHHHHHhhcC---CCCcEEEEEeChhHHHHHHHHHh----C------CCCceEEEEeCCCCC
Q 012190 223 GLVKFVEETVRREHASS---PEKPIYLVGDSFGGCLALAVAAR----N------PTIDLILILSNPATS 278 (468)
Q Consensus 223 ~~~~dl~~~i~~~~~~~---~~~~i~LvGhS~GG~ia~~~a~~----~------P~~v~~lVli~p~~~ 278 (468)
+.++++.++++...... ...+++|.|.|+||..+-.+|.. + +-.++|+++-+|...
T Consensus 143 ~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~ 211 (433)
T PLN03016 143 SEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTY 211 (433)
T ss_pred HHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcC
Confidence 23355665555544333 35789999999999877666643 2 225789999888653
No 180
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.15 E-value=0.0022 Score=63.11 Aligned_cols=60 Identities=13% Similarity=0.300 Sum_probs=49.9
Q ss_pred ccCCceEEEEEeCCCCCCCcHHHHHHHHHhCC-CcEEEEeCCCCccccccCcHHHHHHHHhcCcccc
Q 012190 376 HAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQ-NCIVRNFKDNGHTLLLEEGISLLTIIKGTCKYRR 441 (468)
Q Consensus 376 ~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~-~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r 441 (468)
.++++|.++|.|..|.+..++ ....+...+| .+.+..+||++|.+.. ..+.+.|. .|+++
T Consensus 259 ~rL~~PK~ii~atgDeFf~pD-~~~~y~d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~--~f~~~ 319 (367)
T PF10142_consen 259 DRLTMPKYIINATGDEFFVPD-SSNFYYDKLPGEKYLRYVPNAGHSLIG---SDVVQSLR--AFYNR 319 (367)
T ss_pred HhcCccEEEEecCCCceeccC-chHHHHhhCCCCeeEEeCCCCCcccch---HHHHHHHH--HHHHH
Confidence 456899999999999999999 6999999998 5678899999999876 55666666 46655
No 181
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.09 E-value=0.0021 Score=62.61 Aligned_cols=97 Identities=18% Similarity=0.149 Sum_probs=73.9
Q ss_pred CeEEEeCCCCCchhhHHH---hHhhhcC--CeEEEEecCCCCCCC-----------------ChHHHHHHHHHHHHHHhh
Q 012190 180 PTLLFLPGIDGLGLGLIL---HHKPLGK--AFEVRCLHIPVYDRT-----------------PFEGLVKFVEETVRREHA 237 (468)
Q Consensus 180 p~lV~lHG~~~s~~~~~~---~~~~L~~--~~~V~~~D~~G~G~S-----------------s~~~~~~dl~~~i~~~~~ 237 (468)
.+|+|--|.-|+.+.|.. ++-.++. +--++-.++|-+|+| +.++...|..+++..++.
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~ 160 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKR 160 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhh
Confidence 468888999888886654 2333322 346777899999988 356677777888887775
Q ss_pred cCC--CCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCC
Q 012190 238 SSP--EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPA 276 (468)
Q Consensus 238 ~~~--~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~ 276 (468)
... ..+|+.+|-|+||++|..+=.+||+.+.|.+..+.+
T Consensus 161 ~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAP 201 (492)
T KOG2183|consen 161 DLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAP 201 (492)
T ss_pred ccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCc
Confidence 532 568999999999999999999999999988775544
No 182
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=96.99 E-value=0.0014 Score=68.45 Aligned_cols=98 Identities=11% Similarity=0.053 Sum_probs=58.2
Q ss_pred CCCCeEEEeCCCCCc---hhh--HHHhHhhhcCCeEEEEecCC-C---CCCC---------ChHHHHHH---HHHHHHHH
Q 012190 177 KGSPTLLFLPGIDGL---GLG--LILHHKPLGKAFEVRCLHIP-V---YDRT---------PFEGLVKF---VEETVRRE 235 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s---~~~--~~~~~~~L~~~~~V~~~D~~-G---~G~S---------s~~~~~~d---l~~~i~~~ 235 (468)
++.|+||++||.+.. ... ...++.... ++-|+++++| | +..+ .+.|.... +.+-+...
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~~~~~~~~~~~-~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~f 171 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLYPGDGLAREGD-NVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAF 171 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCCChHHHHhcCC-CEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHh
Confidence 357999999996322 111 222222222 4889999998 2 3222 12333222 22223322
Q ss_pred hhcCCCCcEEEEEeChhHHHHHHHHHh--CCCCceEEEEeCCCC
Q 012190 236 HASSPEKPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPAT 277 (468)
Q Consensus 236 ~~~~~~~~i~LvGhS~GG~ia~~~a~~--~P~~v~~lVli~p~~ 277 (468)
+ ....+|.|+|+|.||..+..++.. .+..++++|+.++..
T Consensus 172 g--gd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 172 G--GDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred C--CCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 2 235689999999999998877765 345788889887655
No 183
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=96.74 E-value=0.02 Score=54.61 Aligned_cols=51 Identities=18% Similarity=0.291 Sum_probs=41.0
Q ss_pred ccCC-ceEEEEEeCCCCCCCcHHHHHHHHHhCCC--cEEEEeCCCCccccccCcH
Q 012190 376 HAVK-AEVLVLASGKDNMLPSEDEAKRLNNSLQN--CIVRNFKDNGHTLLLEEGI 427 (468)
Q Consensus 376 ~~i~-~PvLlI~G~~D~~v~~~~~~~~l~~~l~~--~~~~~i~~aGH~~~~e~p~ 427 (468)
..+. +|+|+++|.+|..+|.. ....+.+.... .+...+++++|......+.
T Consensus 228 ~~i~~~P~l~~~G~~D~~vp~~-~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~ 281 (299)
T COG1073 228 EKISPRPVLLVHGERDEVVPLR-DAEDLYEAARERPKKLLFVPGGGHIDLYDNPP 281 (299)
T ss_pred hhcCCcceEEEecCCCcccchh-hhHHHHhhhccCCceEEEecCCccccccCccH
Confidence 3444 79999999999999999 68888777655 5788889999998875544
No 184
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=96.70 E-value=0.036 Score=60.81 Aligned_cols=88 Identities=31% Similarity=0.519 Sum_probs=65.0
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC--------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEe
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT--------PFEGLVKFVEETVRREHASSPEKPIYLVGD 249 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S--------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGh 249 (468)
..|++.|+|..-|....+..++..| ..|.||.- ++++.++....-+++ -.|..|..|+|+
T Consensus 2122 e~~~~Ffv~pIEG~tt~l~~la~rl---------e~PaYglQ~T~~vP~dSies~A~~yirqirk---vQP~GPYrl~GY 2189 (2376)
T KOG1202|consen 2122 EEPPLFFVHPIEGFTTALESLASRL---------EIPAYGLQCTEAVPLDSIESLAAYYIRQIRK---VQPEGPYRLAGY 2189 (2376)
T ss_pred cCCceEEEeccccchHHHHHHHhhc---------CCcchhhhccccCCcchHHHHHHHHHHHHHh---cCCCCCeeeecc
Confidence 5788999999999999888888887 34555532 466666655544444 346679999999
Q ss_pred ChhHHHHHHHHHhCC--CCceEEEEeCCCC
Q 012190 250 SFGGCLALAVAARNP--TIDLILILSNPAT 277 (468)
Q Consensus 250 S~GG~ia~~~a~~~P--~~v~~lVli~p~~ 277 (468)
|+|++++..+|.... +-...+|+++++.
T Consensus 2190 SyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2190 SYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred chhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 999999999986532 3345588888765
No 185
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.68 E-value=0.031 Score=49.31 Aligned_cols=106 Identities=14% Similarity=0.148 Sum_probs=68.2
Q ss_pred CCCCCCCCCeEEEeCCCCCchhhHHH--------hH----hh---hcC--CeEEEE---ecCCCCCCC------ChHHHH
Q 012190 172 CGRPLKGSPTLLFLPGIDGLGLGLIL--------HH----KP---LGK--AFEVRC---LHIPVYDRT------PFEGLV 225 (468)
Q Consensus 172 ~g~~~~~~p~lV~lHG~~~s~~~~~~--------~~----~~---L~~--~~~V~~---~D~~G~G~S------s~~~~~ 225 (468)
.|++.....+.++++|.+.+...+.. +. .. ... .-.+++ ||-|.-+.. --+.-+
T Consensus 12 ~GD~d~A~~Vav~VPG~~t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vAvV~WlgYdaP~~~~~~a~~~~~A~~ga 91 (177)
T PF06259_consen 12 VGDPDTADHVAVLVPGTGTTLDSFLGGMDDEARALRAAAARAARAAGPGGSVAVVAWLGYDAPAGGLPDAASPGYARAGA 91 (177)
T ss_pred ECCcCCcCeeEEEcCCCCCCcccccchhHHHHHHHHHHHHHHHHhhcCCCCeEEEEEcCCCCCCCccccccCchHHHHHH
Confidence 34443446688999999877652211 11 11 112 233333 555621111 145667
Q ss_pred HHHHHHHHHHhhcC-CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 226 KFVEETVRREHASS-PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 226 ~dl~~~i~~~~~~~-~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
.++..+++.+.... +..++.++|||+|+.++-..+...+..++.+|+++++.
T Consensus 92 ~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG 144 (177)
T PF06259_consen 92 PRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCC
Confidence 77788887777655 56789999999999999887777677899999988754
No 186
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=96.67 E-value=0.03 Score=51.63 Aligned_cols=95 Identities=18% Similarity=0.163 Sum_probs=56.3
Q ss_pred CeEEEeCCCC--Cchh-hHHHhHhhh-cCCeEEEEecC-CCCCCCC-hHHHHHHHHHHHHHHhhcC----CCCcEEEEEe
Q 012190 180 PTLLFLPGID--GLGL-GLILHHKPL-GKAFEVRCLHI-PVYDRTP-FEGLVKFVEETVRREHASS----PEKPIYLVGD 249 (468)
Q Consensus 180 p~lV~lHG~~--~s~~-~~~~~~~~L-~~~~~V~~~D~-~G~G~Ss-~~~~~~dl~~~i~~~~~~~----~~~~i~LvGh 249 (468)
.+|=|+-|.. .... .|..+.+.| .+||.|++.-+ .|+.--. ..+..+.....++.+.... ..-|++-+||
T Consensus 18 gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vGH 97 (250)
T PF07082_consen 18 GVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVVTFDHQAIAREVWERFERCLRALQKRGGLDPAYLPVYGVGH 97 (250)
T ss_pred EEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCeeeeec
Confidence 3556666642 2222 788889999 67899999665 2332111 1112222222233222211 1247889999
Q ss_pred ChhHHHHHHHHHhCCCCceEEEEeC
Q 012190 250 SFGGCLALAVAARNPTIDLILILSN 274 (468)
Q Consensus 250 S~GG~ia~~~a~~~P~~v~~lVli~ 274 (468)
|||+-+-+.+...++..-.+-|+++
T Consensus 98 SlGcklhlLi~s~~~~~r~gniliS 122 (250)
T PF07082_consen 98 SLGCKLHLLIGSLFDVERAGNILIS 122 (250)
T ss_pred ccchHHHHHHhhhccCcccceEEEe
Confidence 9999999888888765556667754
No 187
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=96.66 E-value=0.014 Score=53.88 Aligned_cols=95 Identities=20% Similarity=0.135 Sum_probs=67.3
Q ss_pred CeEEEeCCCCCchhh--HHHhHhhhc--CCeEEEEecCCCCC--CC---ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeC
Q 012190 180 PTLLFLPGIDGLGLG--LILHHKPLG--KAFEVRCLHIPVYD--RT---PFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (468)
Q Consensus 180 p~lV~lHG~~~s~~~--~~~~~~~L~--~~~~V~~~D~~G~G--~S---s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS 250 (468)
-++|++||++++... +..+.+.+. .+..|+|+|. |-| .| ...+.++.+.+.++..... .+-++++|.|
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~~~s~l~pl~~Qv~~~ce~v~~m~~l--sqGynivg~S 100 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGIKDSSLMPLWEQVDVACEKVKQMPEL--SQGYNIVGYS 100 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCcchhhhccHHHHHHHHHHHHhcchhc--cCceEEEEEc
Confidence 368899999988875 666666663 3678888885 444 44 3567777777777743322 4578999999
Q ss_pred hhHHHHHHHHHhCC-CCceEEEEeCCCC
Q 012190 251 FGGCLALAVAARNP-TIDLILILSNPAT 277 (468)
Q Consensus 251 ~GG~ia~~~a~~~P-~~v~~lVli~p~~ 277 (468)
.||.++-.++..-| ..|..+|-++++.
T Consensus 101 QGglv~Raliq~cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 101 QGGLVARALIQFCDNPPVKNFISLGGPH 128 (296)
T ss_pred cccHHHHHHHHhCCCCCcceeEeccCCc
Confidence 99999998887754 3567777766543
No 188
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.42 E-value=0.0065 Score=56.39 Aligned_cols=56 Identities=21% Similarity=0.317 Sum_probs=37.8
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhC-----CCCceEEEEeCCC
Q 012190 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARN-----PTIDLILILSNPA 276 (468)
Q Consensus 221 ~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~-----P~~v~~lVli~p~ 276 (468)
+..+.+++...++....+.+..++++.||||||++|..++... +..+..+..-+|.
T Consensus 107 ~~~~~~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~ 167 (229)
T cd00519 107 YKSLYNQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPR 167 (229)
T ss_pred HHHHHHHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCC
Confidence 4445555555555555556788999999999999999888753 3345555554443
No 189
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.42 E-value=0.0061 Score=51.63 Aligned_cols=37 Identities=27% Similarity=0.422 Sum_probs=26.5
Q ss_pred HHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHh
Q 012190 226 KFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 226 ~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~ 262 (468)
+.+.+.++.+....+..++++.|||+||++|..++..
T Consensus 48 ~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 48 DQILDALKELVEKYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHh
Confidence 3444444444434666799999999999999988866
No 190
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.29 E-value=0.038 Score=55.58 Aligned_cols=98 Identities=16% Similarity=0.196 Sum_probs=76.5
Q ss_pred CCCeEEEeCCCCCchhhH--------HHhHhhhcCCeEEEEecCCCCCCC--------------ChHHHHHHHHHHHHHH
Q 012190 178 GSPTLLFLPGIDGLGLGL--------ILHHKPLGKAFEVRCLHIPVYDRT--------------PFEGLVKFVEETVRRE 235 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~--------~~~~~~L~~~~~V~~~D~~G~G~S--------------s~~~~~~dl~~~i~~~ 235 (468)
++|..|+|-|=+.-...| ...++++ +-.|+.+++|-+|.| +.+....|+.++|+++
T Consensus 85 ~gPiFLmIGGEgp~~~~wv~~~~~~~~~~Akkf--gA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~ 162 (514)
T KOG2182|consen 85 GGPIFLMIGGEGPESDKWVGNENLTWLQWAKKF--GATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAM 162 (514)
T ss_pred CCceEEEEcCCCCCCCCccccCcchHHHHHHHh--CCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHH
Confidence 577788887766555333 3334443 467888999999977 3677889999999998
Q ss_pred hhcCC---CCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 236 HASSP---EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 236 ~~~~~---~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
..+.+ ..|.+.+|-|+-|.++..+=..+||.+.|.|..+.+.
T Consensus 163 n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv 207 (514)
T KOG2182|consen 163 NAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPV 207 (514)
T ss_pred HhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccce
Confidence 87753 2389999999999999999999999999988876654
No 191
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.21 E-value=0.035 Score=51.73 Aligned_cols=37 Identities=22% Similarity=0.250 Sum_probs=33.6
Q ss_pred CCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 241 EKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 241 ~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
..+..++|||+||.+++.....+|+.+...++++|..
T Consensus 136 ~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 136 SERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred cccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 4568899999999999999999999999999999854
No 192
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=96.13 E-value=0.026 Score=50.19 Aligned_cols=85 Identities=14% Similarity=0.076 Sum_probs=54.5
Q ss_pred hhHHHhHhhh--cCCeEEEEecCCCCCCC-----ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHh---
Q 012190 193 LGLILHHKPL--GKAFEVRCLHIPVYDRT-----PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR--- 262 (468)
Q Consensus 193 ~~~~~~~~~L--~~~~~V~~~D~~G~G~S-----s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~--- 262 (468)
..+...++.. .....+..+++|--... +...=+..+...++......|+.+++|+|+|.||.++..++..
T Consensus 25 ~~~~~~l~~~~g~~~~~~~~V~YpA~~~~~~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l 104 (179)
T PF01083_consen 25 PPFADALQAQPGGTSVAVQGVEYPASLGPNSYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGL 104 (179)
T ss_dssp HHHHHHHHHHCTTCEEEEEE--S---SCGGSCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHhhcCCCeeEEEecCCCCCCCcccccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccC
Confidence 3444434333 34577877888865433 3445556666666666666888999999999999999988877
Q ss_pred ---CCCCceEEEEeCCCC
Q 012190 263 ---NPTIDLILILSNPAT 277 (468)
Q Consensus 263 ---~P~~v~~lVli~p~~ 277 (468)
..++|.++++++-+.
T Consensus 105 ~~~~~~~I~avvlfGdP~ 122 (179)
T PF01083_consen 105 PPDVADRIAAVVLFGDPR 122 (179)
T ss_dssp SHHHHHHEEEEEEES-TT
T ss_pred ChhhhhhEEEEEEecCCc
Confidence 235788988876544
No 193
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.96 E-value=0.067 Score=47.68 Aligned_cols=101 Identities=16% Similarity=0.277 Sum_probs=61.7
Q ss_pred CCeEEEeCCCCCchh-hHHHh---------------H-hhhcCCeEEEEecCCC---CCCC---C---hHHHHHHHHHHH
Q 012190 179 SPTLLFLPGIDGLGL-GLILH---------------H-KPLGKAFEVRCLHIPV---YDRT---P---FEGLVKFVEETV 232 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~-~~~~~---------------~-~~L~~~~~V~~~D~~G---~G~S---s---~~~~~~dl~~~i 232 (468)
...+|++||.|-... .|.+- + ++.+.||.|+....-- +-.+ + +..-++.+..+.
T Consensus 101 ~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~yvw 180 (297)
T KOG3967|consen 101 QKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKYVW 180 (297)
T ss_pred cceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHHHH
Confidence 448999999886654 45441 1 2335689998876421 1000 0 111122222333
Q ss_pred HHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCC--CceEEEEeCCCCCC
Q 012190 233 RREHASSPEKPIYLVGDSFGGCLALAVAARNPT--IDLILILSNPATSF 279 (468)
Q Consensus 233 ~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~--~v~~lVli~p~~~~ 279 (468)
...-.....+.++++.||+||...+.+..++|+ .|.++.+-+++...
T Consensus 181 ~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~~~~ 229 (297)
T KOG3967|consen 181 KNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSAMGS 229 (297)
T ss_pred HHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeecccccC
Confidence 332222345689999999999999999999884 57777777766443
No 194
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=95.93 E-value=0.018 Score=57.59 Aligned_cols=84 Identities=12% Similarity=0.100 Sum_probs=60.0
Q ss_pred hhHHHhHhhh-cCCeE----E--EEecCCC-CCCC-ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhC
Q 012190 193 LGLILHHKPL-GKAFE----V--RCLHIPV-YDRT-PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARN 263 (468)
Q Consensus 193 ~~~~~~~~~L-~~~~~----V--~~~D~~G-~G~S-s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~ 263 (468)
..|..+++.| .-||. + ..+|+|- +-.+ ..+++...+...++......+.+||+||+|||||.+.+.+...+
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~ 203 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRLSYHNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWV 203 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhhccCChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcc
Confidence 5788888888 44554 3 3488874 2222 35666677777777766667779999999999999999999888
Q ss_pred CC--------CceEEEEeCCC
Q 012190 264 PT--------IDLILILSNPA 276 (468)
Q Consensus 264 P~--------~v~~lVli~p~ 276 (468)
++ .|++++-++++
T Consensus 204 ~~~~~~W~~k~I~sfvnig~p 224 (473)
T KOG2369|consen 204 EAEGPAWCDKYIKSFVNIGAP 224 (473)
T ss_pred cccchhHHHHHHHHHHccCch
Confidence 76 35555555443
No 195
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=95.91 E-value=0.042 Score=56.41 Aligned_cols=113 Identities=19% Similarity=0.255 Sum_probs=72.6
Q ss_pred cCCCCCC-ceeeeecCCCCCCCCCCeEEEeCCCCCchh----hHHHhH-hhhcCCeEEEEecCCCCCCC-----------
Q 012190 157 IKPDGGP-PRWFCPVDCGRPLKGSPTLLFLPGIDGLGL----GLILHH-KPLGKAFEVRCLHIPVYDRT----------- 219 (468)
Q Consensus 157 ~~~dg~~-~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~----~~~~~~-~~L~~~~~V~~~D~~G~G~S----------- 219 (468)
...||.. |.++.. .|-..+++|++|+ |+||-.- .|.+.. ..|.+|...+.-.+||=|+-
T Consensus 400 tSkDGT~IPYFiv~--K~~~~d~~pTll~--aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~ 475 (648)
T COG1505 400 TSKDGTRIPYFIVR--KGAKKDENPTLLY--AYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKE 475 (648)
T ss_pred EcCCCccccEEEEe--cCCcCCCCceEEE--eccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhh
Confidence 4557765 444433 3322235777665 4444332 344444 33477877777899997754
Q ss_pred ----ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCC
Q 012190 220 ----PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNP 275 (468)
Q Consensus 220 ----s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p 275 (468)
-++|+..-.+++++.--. ..+++.+.|-|-||.+.-.+..++||.+.++|+--|
T Consensus 476 nrq~vfdDf~AVaedLi~rgit--spe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evP 533 (648)
T COG1505 476 NKQNVFDDFIAVAEDLIKRGIT--SPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVP 533 (648)
T ss_pred cchhhhHHHHHHHHHHHHhCCC--CHHHhhhccCCCCceEEEeeeccChhhhCceeeccc
Confidence 256666666666654211 134788999999999999889999999988887655
No 196
>COG0627 Predicted esterase [General function prediction only]
Probab=95.81 E-value=0.035 Score=53.84 Aligned_cols=38 Identities=24% Similarity=0.121 Sum_probs=34.2
Q ss_pred cEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCCCCC
Q 012190 243 PIYLVGDSFGGCLALAVAARNPTIDLILILSNPATSFG 280 (468)
Q Consensus 243 ~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~~~~ 280 (468)
...++||||||.=|+.+|++||+++..+...+|...+.
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 67899999999999999999999999999988877554
No 197
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=95.75 E-value=0.016 Score=59.77 Aligned_cols=84 Identities=10% Similarity=-0.024 Sum_probs=56.8
Q ss_pred hHHHhHhhh-cCCeE-----EEEecCCCCCCC--ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCC-
Q 012190 194 GLILHHKPL-GKAFE-----VRCLHIPVYDRT--PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNP- 264 (468)
Q Consensus 194 ~~~~~~~~L-~~~~~-----V~~~D~~G~G~S--s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P- 264 (468)
.|..+++.| ..+|. ...+|+|=-... .-+++...+...|+.......++||+|+||||||.+++.+.....
T Consensus 157 vw~kLIe~L~~iGY~~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~ 236 (642)
T PLN02517 157 VWAVLIANLARIGYEEKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEA 236 (642)
T ss_pred eHHHHHHHHHHcCCCCCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccc
Confidence 568888888 44453 333676632211 235566667777776655555789999999999999998876321
Q ss_pred --------------CCceEEEEeCCCC
Q 012190 265 --------------TIDLILILSNPAT 277 (468)
Q Consensus 265 --------------~~v~~lVli~p~~ 277 (468)
..|++.|.++++.
T Consensus 237 ~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 237 PAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred cccccCCcchHHHHHHHHHheeccccc
Confidence 2478889988865
No 198
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=95.70 E-value=0.038 Score=50.98 Aligned_cols=82 Identities=17% Similarity=0.111 Sum_probs=48.8
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHH
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALA 258 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~ 258 (468)
+..+|-.=|-..+...|..-+.- +++.. .... +...+.++......+. ++++.|||.||.+|..
T Consensus 37 ~~~~vaFRGTd~t~~~W~ed~~~-------------~~~~~-~~~q-~~A~~yl~~~~~~~~~-~i~v~GHSkGGnLA~y 100 (224)
T PF11187_consen 37 GEYVVAFRGTDDTLVDWKEDFNM-------------SFQDE-TPQQ-KSALAYLKKIAKKYPG-KIYVTGHSKGGNLAQY 100 (224)
T ss_pred CeEEEEEECCCCchhhHHHHHHh-------------hcCCC-CHHH-HHHHHHHHHHHHhCCC-CEEEEEechhhHHHHH
Confidence 44677777887776677653311 11110 1111 2222333333333444 5999999999999998
Q ss_pred HHHhC----CCCceEEEEeCCC
Q 012190 259 VAARN----PTIDLILILSNPA 276 (468)
Q Consensus 259 ~a~~~----P~~v~~lVli~p~ 276 (468)
.|+.. .++|.++...+++
T Consensus 101 aa~~~~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 101 AAANCDDEIQDRISKVYSFDGP 122 (224)
T ss_pred HHHHccHHHhhheeEEEEeeCC
Confidence 88773 3578888887764
No 199
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=95.36 E-value=0.046 Score=55.10 Aligned_cols=101 Identities=18% Similarity=0.222 Sum_probs=60.7
Q ss_pred CCCCCeEEEeCCCC---CchhhHHHhHhhh-cCC-eEEEEecCC----C------CC--CC-----ChHHH---HHHHHH
Q 012190 176 LKGSPTLLFLPGID---GLGLGLILHHKPL-GKA-FEVRCLHIP----V------YD--RT-----PFEGL---VKFVEE 230 (468)
Q Consensus 176 ~~~~p~lV~lHG~~---~s~~~~~~~~~~L-~~~-~~V~~~D~~----G------~G--~S-----s~~~~---~~dl~~ 230 (468)
.++.|++|++||.+ |++.....--..| .++ +-|+++++| | .+ +. -+.|+ .+.+.+
T Consensus 91 a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~ 170 (491)
T COG2272 91 AEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRD 170 (491)
T ss_pred CCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHH
Confidence 34679999999973 3333322334556 344 777777775 1 12 11 12232 344445
Q ss_pred HHHHHhhcCCCCcEEEEEeChhHHHHHHHHHh--CCCCceEEEEeCCCCC
Q 012190 231 TVRREHASSPEKPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPATS 278 (468)
Q Consensus 231 ~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~--~P~~v~~lVli~p~~~ 278 (468)
-|++.+- ....|.|+|+|.||+.++.+.+- ....+.++|+.++...
T Consensus 171 NIe~FGG--Dp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 171 NIEAFGG--DPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHhCC--CccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 5555442 24589999999999887766553 2246778888887765
No 200
>PLN02209 serine carboxypeptidase
Probab=95.35 E-value=0.13 Score=52.48 Aligned_cols=114 Identities=24% Similarity=0.332 Sum_probs=73.0
Q ss_pred eeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhH---h-------------hh-------cCCeEEEEecCC-CCCCC--
Q 012190 166 WFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHH---K-------------PL-------GKAFEVRCLHIP-VYDRT-- 219 (468)
Q Consensus 166 ~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~---~-------------~L-------~~~~~V~~~D~~-G~G~S-- 219 (468)
|+.+.+......+.|+++.+.|.+|++..+..+. + .| .+..+++-+|.| |.|.|
T Consensus 55 f~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~ 134 (437)
T PLN02209 55 FYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYS 134 (437)
T ss_pred EEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCC
Confidence 3444443333356899999999988887543211 0 11 234678889965 67765
Q ss_pred -------ChHHHHHHHHHHHHHHhhcCC---CCcEEEEEeChhHHHHHHHHHh----C------CCCceEEEEeCCCCCC
Q 012190 220 -------PFEGLVKFVEETVRREHASSP---EKPIYLVGDSFGGCLALAVAAR----N------PTIDLILILSNPATSF 279 (468)
Q Consensus 220 -------s~~~~~~dl~~~i~~~~~~~~---~~~i~LvGhS~GG~ia~~~a~~----~------P~~v~~lVli~p~~~~ 279 (468)
+-++.++++.++++......+ ..+++|.|.|+||..+-.+|.. + +-.++|+++.++....
T Consensus 135 ~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~ 214 (437)
T PLN02209 135 KTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHI 214 (437)
T ss_pred CCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccCh
Confidence 123445677777666554443 4689999999999877666643 2 1256799998886643
No 201
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=95.34 E-value=0.049 Score=53.29 Aligned_cols=87 Identities=18% Similarity=0.098 Sum_probs=69.8
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCC--CChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHH
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDR--TPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCL 255 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~--Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~i 255 (468)
...-||..|=||-...=+....+| ..++.|+.+|-.-|=. -+.+..++|+..+++....+.+.+++.|+|+|+|+-+
T Consensus 260 d~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~rtPe~~a~Dl~r~i~~y~~~w~~~~~~liGySfGADv 339 (456)
T COG3946 260 DTVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSERTPEQIAADLSRLIRFYARRWGAKRVLLIGYSFGADV 339 (456)
T ss_pred ceEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhccCCHHHHHHHHHHHHHHHHHhhCcceEEEEeecccchh
Confidence 446688888888777777888899 6789999999544332 3789999999999999888788899999999999988
Q ss_pred HHHHHHhCCC
Q 012190 256 ALAVAARNPT 265 (468)
Q Consensus 256 a~~~a~~~P~ 265 (468)
.-..-.+.|.
T Consensus 340 lP~~~n~L~~ 349 (456)
T COG3946 340 LPFAYNRLPP 349 (456)
T ss_pred hHHHHHhCCH
Confidence 7655555553
No 202
>PLN02162 triacylglycerol lipase
Probab=94.99 E-value=0.067 Score=53.84 Aligned_cols=33 Identities=30% Similarity=0.425 Sum_probs=24.1
Q ss_pred HHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHH
Q 012190 229 EETVRREHASSPEKPIYLVGDSFGGCLALAVAA 261 (468)
Q Consensus 229 ~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~ 261 (468)
.+.++....+.+..++++.|||+||++|+.+|+
T Consensus 265 ~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 265 RQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 333333333467779999999999999998765
No 203
>PLN02454 triacylglycerol lipase
Probab=94.91 E-value=0.091 Score=52.41 Aligned_cols=39 Identities=21% Similarity=0.212 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHhhcCCCCc--EEEEEeChhHHHHHHHHHh
Q 012190 224 LVKFVEETVRREHASSPEKP--IYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 224 ~~~dl~~~i~~~~~~~~~~~--i~LvGhS~GG~ia~~~a~~ 262 (468)
..+++...++.+....+..+ |++.||||||++|+..|..
T Consensus 208 ~r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 208 ARSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 44455555555544455444 9999999999999988854
No 204
>PLN00413 triacylglycerol lipase
Probab=94.63 E-value=0.099 Score=52.79 Aligned_cols=34 Identities=29% Similarity=0.605 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHH
Q 012190 224 LVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAA 261 (468)
Q Consensus 224 ~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~ 261 (468)
+.+.+.++++. .+..++++.|||+||++|..+|+
T Consensus 270 i~~~Lk~ll~~----~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 270 ILRHLKEIFDQ----NPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHH----CCCCeEEEEecCHHHHHHHHHHH
Confidence 34444444443 67789999999999999998875
No 205
>PLN02310 triacylglycerol lipase
Probab=94.43 E-value=0.11 Score=51.74 Aligned_cols=41 Identities=29% Similarity=0.357 Sum_probs=26.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHh
Q 012190 222 EGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 222 ~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~ 262 (468)
+++.+.+..+++.........+|.+.|||+||++|+..|..
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 34445555555543222234589999999999999988743
No 206
>PLN02571 triacylglycerol lipase
Probab=94.03 E-value=0.083 Score=52.72 Aligned_cols=37 Identities=24% Similarity=0.330 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHHHhhcCCC--CcEEEEEeChhHHHHHHHHHh
Q 012190 222 EGLVKFVEETVRREHASSPE--KPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 222 ~~~~~dl~~~i~~~~~~~~~--~~i~LvGhS~GG~ia~~~a~~ 262 (468)
+++.+++..+++. .+. .+|++.||||||++|+..|..
T Consensus 208 ~qvl~eV~~L~~~----y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEK----YKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHh----cCcccccEEEeccchHHHHHHHHHHH
Confidence 4455555555554 333 378999999999999988864
No 207
>PLN02934 triacylglycerol lipase
Probab=93.82 E-value=0.095 Score=53.34 Aligned_cols=34 Identities=18% Similarity=0.373 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHH
Q 012190 224 LVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAA 261 (468)
Q Consensus 224 ~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~ 261 (468)
..+.+.++++ ..+..++++.|||+||++|..+|.
T Consensus 307 v~~~lk~ll~----~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 307 VRSKLKSLLK----EHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHH----HCCCCeEEEeccccHHHHHHHHHH
Confidence 3444444444 477889999999999999998874
No 208
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=93.66 E-value=0.06 Score=43.69 Aligned_cols=65 Identities=18% Similarity=0.203 Sum_probs=35.9
Q ss_pred hhHHHHhhcCCCcchHHHHHHhccCcc-CCCCCCceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHh
Q 012190 131 EELEVLWDDGYGTDSVKDYLDAAKEII-KPDGGPPRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILH 198 (468)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~y~~~~~~~~-~~dg~~~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~ 198 (468)
+.+-..|.++|.-...++.+..-..+. .-+|...-+++-...+ ++..+|||+||++||-..|.++
T Consensus 46 ~~L~~yW~~~fDWr~~E~~lN~~phf~t~I~g~~iHFih~rs~~---~~aiPLll~HGWPgSf~Ef~~v 111 (112)
T PF06441_consen 46 KELVDYWRNEFDWRKHEARLNSFPHFKTEIDGLDIHFIHVRSKR---PNAIPLLLLHGWPGSFLEFLKV 111 (112)
T ss_dssp HHHHHHHHHT--HHHHHHHHTTS-EEEEEETTEEEEEEEE--S----TT-EEEEEE--SS--GGGGHHH
T ss_pred HHHHHHHhhcCChHHHHHHHHcCCCeeEEEeeEEEEEEEeeCCC---CCCeEEEEECCCCccHHhHHhh
Confidence 357788999998777776665444443 3456654445444332 3577899999999998877654
No 209
>PLN03037 lipase class 3 family protein; Provisional
Probab=93.62 E-value=0.1 Score=53.25 Aligned_cols=40 Identities=28% Similarity=0.322 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHh
Q 012190 223 GLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 223 ~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~ 262 (468)
+..++|..+++.........+|++.|||+||++|+..|..
T Consensus 299 QVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 299 QVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 3445555666543322224579999999999999988754
No 210
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.51 E-value=0.88 Score=38.89 Aligned_cols=77 Identities=16% Similarity=0.040 Sum_probs=51.0
Q ss_pred eEEEeCCCCCchhhHHHhHhhhcCCe-EEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHH
Q 012190 181 TLLFLPGIDGLGLGLILHHKPLGKAF-EVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAV 259 (468)
Q Consensus 181 ~lV~lHG~~~s~~~~~~~~~~L~~~~-~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~ 259 (468)
.||+.-|++.....+.+++ +.+.+ -++|+|+...... + |+. .-+.+.||++|||-.+|-.+
T Consensus 13 LIvyFaGwgtpps~v~HLi--lpeN~dl~lcYDY~dl~ld-f-----Dfs----------Ay~hirlvAwSMGVwvAeR~ 74 (214)
T COG2830 13 LIVYFAGWGTPPSAVNHLI--LPENHDLLLCYDYQDLNLD-F-----DFS----------AYRHIRLVAWSMGVWVAERV 74 (214)
T ss_pred EEEEEecCCCCHHHHhhcc--CCCCCcEEEEeehhhcCcc-c-----chh----------hhhhhhhhhhhHHHHHHHHH
Confidence 7888899999887765543 34444 4578897644321 0 111 11246799999999999888
Q ss_pred HHhCCCCceEEEEeCCCC
Q 012190 260 AARNPTIDLILILSNPAT 277 (468)
Q Consensus 260 a~~~P~~v~~lVli~p~~ 277 (468)
.... +.+..+.+++..
T Consensus 75 lqg~--~lksatAiNGTg 90 (214)
T COG2830 75 LQGI--RLKSATAINGTG 90 (214)
T ss_pred Hhhc--cccceeeecCCC
Confidence 8776 466677777643
No 211
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=93.39 E-value=0.17 Score=45.67 Aligned_cols=40 Identities=15% Similarity=0.234 Sum_probs=30.1
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhC
Q 012190 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARN 263 (468)
Q Consensus 221 ~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~ 263 (468)
+.|..+....++++. ..++|++|+|||.|+.+...+..++
T Consensus 77 y~DV~~AF~~yL~~~---n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 77 YSDVRAAFDYYLANY---NNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred HHHHHHHHHHHHHhc---CCCCCEEEEEeChHHHHHHHHHHHH
Confidence 455555556666652 3567999999999999999998764
No 212
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=93.39 E-value=0.11 Score=50.88 Aligned_cols=47 Identities=17% Similarity=0.239 Sum_probs=34.7
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHhCCC-----CceEEEEeCCCCCCCCCCcC
Q 012190 239 SPEKPIYLVGDSFGGCLALAVAARNPT-----IDLILILSNPATSFGRSQLQ 285 (468)
Q Consensus 239 ~~~~~i~LvGhS~GG~ia~~~a~~~P~-----~v~~lVli~p~~~~~~~~~~ 285 (468)
.+.+||.|||||+|+-+...+.....+ .|+.+++++.+.......|.
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~~~~W~ 268 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSDPEEWR 268 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCCHHHHH
Confidence 367899999999999998777655433 48899999876655444443
No 213
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=93.32 E-value=0.062 Score=38.62 Aligned_cols=48 Identities=17% Similarity=0.092 Sum_probs=24.4
Q ss_pred HHHhccCccCCCCCCceeeeecCCC---CCCCCCCeEEEeCCCCCchhhHH
Q 012190 149 YLDAAKEIIKPDGGPPRWFCPVDCG---RPLKGSPTLLFLPGIDGLGLGLI 196 (468)
Q Consensus 149 y~~~~~~~~~~dg~~~~~~~y~~~g---~~~~~~p~lV~lHG~~~s~~~~~ 196 (468)
|--+...+.+.||-.+...+-.... ...+.+|+|++.||+.+++..|.
T Consensus 10 Y~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 10 YPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp ---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGGC
T ss_pred CCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHHH
Confidence 3345556788898775544433222 12456889999999999998873
No 214
>PLN02408 phospholipase A1
Probab=93.27 E-value=0.14 Score=50.46 Aligned_cols=21 Identities=29% Similarity=0.392 Sum_probs=18.3
Q ss_pred CcEEEEEeChhHHHHHHHHHh
Q 012190 242 KPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 242 ~~i~LvGhS~GG~ia~~~a~~ 262 (468)
.+|++.|||+||++|+.+|..
T Consensus 200 ~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 200 LSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred ceEEEeccchHHHHHHHHHHH
Confidence 369999999999999988865
No 215
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=93.25 E-value=0.33 Score=50.98 Aligned_cols=99 Identities=12% Similarity=0.028 Sum_probs=51.9
Q ss_pred CCCeEEEeCCCCCc---h--hhHHHhHhhhcCCeEEEEecCC----CC---CCCC-------hHHHHHHHHHHHHHHhhc
Q 012190 178 GSPTLLFLPGIDGL---G--LGLILHHKPLGKAFEVRCLHIP----VY---DRTP-------FEGLVKFVEETVRREHAS 238 (468)
Q Consensus 178 ~~p~lV~lHG~~~s---~--~~~~~~~~~L~~~~~V~~~D~~----G~---G~Ss-------~~~~~~dl~~~i~~~~~~ 238 (468)
.-|++|++||.+.. + ..+....-...++.-|+++.+| |+ +... +.|....+.-+-+.+ ..
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI-~~ 202 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNI-AA 202 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHG-GG
T ss_pred ccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhh-hh
Confidence 46999999996332 2 1222222122567888888887 22 1111 223333322222222 22
Q ss_pred CC--CCcEEEEEeChhHHHHHHHHHh--CCCCceEEEEeCCCC
Q 012190 239 SP--EKPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPAT 277 (468)
Q Consensus 239 ~~--~~~i~LvGhS~GG~ia~~~a~~--~P~~v~~lVli~p~~ 277 (468)
.+ ..+|.|+|||.||..+...+.. ....++++|+.++..
T Consensus 203 FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~ 245 (535)
T PF00135_consen 203 FGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSA 245 (535)
T ss_dssp GTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--T
T ss_pred cccCCcceeeeeecccccccceeeecccccccccccccccccc
Confidence 22 3579999999998887655544 236899999998854
No 216
>PLN02847 triacylglycerol lipase
Probab=92.68 E-value=0.57 Score=48.69 Aligned_cols=39 Identities=23% Similarity=0.325 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHh
Q 012190 224 LVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 224 ~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~ 262 (468)
+.+.+...+.......++-+++++|||+||++|..++..
T Consensus 233 I~~~i~~~L~kal~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 233 IAKLSTPCLLKALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHHHHHHHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 333444444444445677799999999999999887764
No 217
>PLN02324 triacylglycerol lipase
Probab=92.54 E-value=0.2 Score=49.93 Aligned_cols=35 Identities=17% Similarity=0.235 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHhhcCCC--CcEEEEEeChhHHHHHHHHHh
Q 012190 224 LVKFVEETVRREHASSPE--KPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 224 ~~~dl~~~i~~~~~~~~~--~~i~LvGhS~GG~ia~~~a~~ 262 (468)
+.+.|..+++. .+. .+|++.|||+||++|+..|..
T Consensus 199 Vl~eV~~L~~~----Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 199 VQGELKRLLEL----YKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHH----CCCCCceEEEecCcHHHHHHHHHHHH
Confidence 34445555544 443 469999999999999988854
No 218
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=92.36 E-value=0.51 Score=47.92 Aligned_cols=102 Identities=19% Similarity=0.128 Sum_probs=66.3
Q ss_pred CCCCCeEEEeCCCCCchhhHHHhHh----hh---------------cCCeEEEEecCC-CCCCC---------ChHHHHH
Q 012190 176 LKGSPTLLFLPGIDGLGLGLILHHK----PL---------------GKAFEVRCLHIP-VYDRT---------PFEGLVK 226 (468)
Q Consensus 176 ~~~~p~lV~lHG~~~s~~~~~~~~~----~L---------------~~~~~V~~~D~~-G~G~S---------s~~~~~~ 226 (468)
..+.|.++.+.|.+|++..+..+.+ .+ ...-.++-+|+| |.|.| +++...+
T Consensus 98 p~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~ 177 (498)
T COG2939 98 PANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGK 177 (498)
T ss_pred CCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccch
Confidence 3468999999999999987765531 11 112467889954 66655 3555555
Q ss_pred HHHHHHHHHhhcC---CC--CcEEEEEeChhHHHHHHHHHhCCC---CceEEEEeCCCC
Q 012190 227 FVEETVRREHASS---PE--KPIYLVGDSFGGCLALAVAARNPT---IDLILILSNPAT 277 (468)
Q Consensus 227 dl~~~i~~~~~~~---~~--~~i~LvGhS~GG~ia~~~a~~~P~---~v~~lVli~p~~ 277 (468)
|+..+.+.....+ .. .+.+|+|.|+||.-+..+|..--+ ..++++++.+..
T Consensus 178 D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvl 236 (498)
T COG2939 178 DVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVL 236 (498)
T ss_pred hHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeee
Confidence 5555555444322 22 489999999999998888865433 356666665544
No 219
>PLN02802 triacylglycerol lipase
Probab=91.66 E-value=0.28 Score=50.03 Aligned_cols=21 Identities=43% Similarity=0.574 Sum_probs=18.2
Q ss_pred CcEEEEEeChhHHHHHHHHHh
Q 012190 242 KPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 242 ~~i~LvGhS~GG~ia~~~a~~ 262 (468)
.+|++.|||+||++|+..|..
T Consensus 330 ~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 330 LSITVTGHSLGAALALLVADE 350 (509)
T ss_pred ceEEEeccchHHHHHHHHHHH
Confidence 478999999999999987764
No 220
>PLN02753 triacylglycerol lipase
Probab=91.65 E-value=0.27 Score=50.31 Aligned_cols=22 Identities=36% Similarity=0.557 Sum_probs=19.1
Q ss_pred CCcEEEEEeChhHHHHHHHHHh
Q 012190 241 EKPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 241 ~~~i~LvGhS~GG~ia~~~a~~ 262 (468)
..+|++.|||+||++|+..|..
T Consensus 311 ~~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 311 DLSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred CceEEEEccCHHHHHHHHHHHH
Confidence 4689999999999999988853
No 221
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=91.15 E-value=1.4 Score=42.11 Aligned_cols=115 Identities=17% Similarity=0.165 Sum_probs=75.8
Q ss_pred ceeeeecCCCCCCCCCCeEEEeCCCCCchhhHHHhHhhhc--------------CCeEEEEecCC-CCCCC---------
Q 012190 164 PRWFCPVDCGRPLKGSPTLLFLPGIDGLGLGLILHHKPLG--------------KAFEVRCLHIP-VYDRT--------- 219 (468)
Q Consensus 164 ~~~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~~~~~L~--------------~~~~V~~~D~~-G~G~S--------- 219 (468)
.-|+.|..... ....|..+.+.|.++....-....+++. +.-.++-+|-| |.|.|
T Consensus 17 F~wly~~~~~~-ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGfSyVdg~~~Y~ 95 (414)
T KOG1283|consen 17 FWWLYYATANV-KSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGFSYVDGSSAYT 95 (414)
T ss_pred EEEEeeecccc-ccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhccEEEecCCCcCceeeecCccccc
Confidence 35666654433 1346778888888666552222222221 23566777876 66655
Q ss_pred -ChHHHHHHHHHHHHHHhhcC---CCCcEEEEEeChhHHHHHHHHHhCC---------CCceEEEEeCCCCCC
Q 012190 220 -PFEGLVKFVEETVRREHASS---PEKPIYLVGDSFGGCLALAVAARNP---------TIDLILILSNPATSF 279 (468)
Q Consensus 220 -s~~~~~~dl~~~i~~~~~~~---~~~~i~LvGhS~GG~ia~~~a~~~P---------~~v~~lVli~p~~~~ 279 (468)
+.++.+.|+.++++.+...+ ...|++++..|+||-+|..++...- -...+++|-++++++
T Consensus 96 ~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWISP 168 (414)
T KOG1283|consen 96 TNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWISP 168 (414)
T ss_pred ccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccCh
Confidence 47888889998888876543 3579999999999999988885432 245678888887754
No 222
>PLN02761 lipase class 3 family protein
Probab=91.10 E-value=0.33 Score=49.65 Aligned_cols=21 Identities=43% Similarity=0.539 Sum_probs=18.2
Q ss_pred CCcEEEEEeChhHHHHHHHHH
Q 012190 241 EKPIYLVGDSFGGCLALAVAA 261 (468)
Q Consensus 241 ~~~i~LvGhS~GG~ia~~~a~ 261 (468)
..+|++.|||+||++|+..|.
T Consensus 293 ~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 293 EISITVTGHSLGASLALVSAY 313 (527)
T ss_pred CceEEEeccchHHHHHHHHHH
Confidence 347999999999999998774
No 223
>PLN02719 triacylglycerol lipase
Probab=90.92 E-value=0.36 Score=49.31 Aligned_cols=21 Identities=38% Similarity=0.525 Sum_probs=18.4
Q ss_pred CcEEEEEeChhHHHHHHHHHh
Q 012190 242 KPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 242 ~~i~LvGhS~GG~ia~~~a~~ 262 (468)
.+|.+.|||+||++|+..|..
T Consensus 298 ~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred ceEEEecCcHHHHHHHHHHHH
Confidence 479999999999999988753
No 224
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=90.44 E-value=0.29 Score=48.30 Aligned_cols=78 Identities=21% Similarity=0.146 Sum_probs=46.6
Q ss_pred CCCCeEEEeCCCCC-chhhHHHhHhhhcCCeEEEEecCCCCCCC---C-------hHHHHHHHHHHHHHHhhcCCCCcEE
Q 012190 177 KGSPTLLFLPGIDG-LGLGLILHHKPLGKAFEVRCLHIPVYDRT---P-------FEGLVKFVEETVRREHASSPEKPIY 245 (468)
Q Consensus 177 ~~~p~lV~lHG~~~-s~~~~~~~~~~L~~~~~V~~~D~~G~G~S---s-------~~~~~~dl~~~i~~~~~~~~~~~i~ 245 (468)
+++..+|+.||+-+ +...|...+....+.+.-..+..+|+-.. + -+.+++++.+.+.. ....+|-
T Consensus 78 k~~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~----~si~kIS 153 (405)
T KOG4372|consen 78 KPKHLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYD----YSIEKIS 153 (405)
T ss_pred CCceEEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccccchhhccccceeeecccHHHHhhhhhc----cccceee
Confidence 34568999999988 56678777766644322223333333221 1 13344444444333 2245899
Q ss_pred EEEeChhHHHHHH
Q 012190 246 LVGDSFGGCLALA 258 (468)
Q Consensus 246 LvGhS~GG~ia~~ 258 (468)
.+|||+||.++..
T Consensus 154 fvghSLGGLvar~ 166 (405)
T KOG4372|consen 154 FVGHSLGGLVARY 166 (405)
T ss_pred eeeeecCCeeeeE
Confidence 9999999998753
No 225
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=90.33 E-value=7.8 Score=39.50 Aligned_cols=102 Identities=20% Similarity=0.261 Sum_probs=63.6
Q ss_pred eeeecCCCCCCCCCCeEEEeCCCCCchhhHHH--hHhhhcCCeEEEEecCCCCCCC------ChH-HHHHHHHHHHHHHh
Q 012190 166 WFCPVDCGRPLKGSPTLLFLPGIDGLGLGLIL--HHKPLGKAFEVRCLHIPVYDRT------PFE-GLVKFVEETVRREH 236 (468)
Q Consensus 166 ~~~y~~~g~~~~~~p~lV~lHG~~~s~~~~~~--~~~~L~~~~~V~~~D~~G~G~S------s~~-~~~~dl~~~i~~~~ 236 (468)
+++|...|+- ..|..|+.-|+-. .+.|.. .++.|..-| .+.-|.|=.|.+ .+| ...+-|.+.++.++
T Consensus 278 i~yYFnPGD~--KPPL~VYFSGyR~-aEGFEgy~MMk~Lg~Pf-LL~~DpRleGGaFYlGs~eyE~~I~~~I~~~L~~Lg 353 (511)
T TIGR03712 278 FIYYFNPGDF--KPPLNVYFSGYRP-AEGFEGYFMMKRLGAPF-LLIGDPRLEGGAFYLGSDEYEQGIINVIQEKLDYLG 353 (511)
T ss_pred eEEecCCcCC--CCCeEEeeccCcc-cCcchhHHHHHhcCCCe-EEeeccccccceeeeCcHHHHHHHHHHHHHHHHHhC
Confidence 3455555652 4567799999866 454443 345553322 233477777766 233 33445555666654
Q ss_pred hcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCC
Q 012190 237 ASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNP 275 (468)
Q Consensus 237 ~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p 275 (468)
.....++|-|-|||..-|+.+++... -.++|+.-|
T Consensus 354 --F~~~qLILSGlSMGTfgAlYYga~l~--P~AIiVgKP 388 (511)
T TIGR03712 354 --FDHDQLILSGLSMGTFGALYYGAKLS--PHAIIVGKP 388 (511)
T ss_pred --CCHHHeeeccccccchhhhhhcccCC--CceEEEcCc
Confidence 33567999999999999999999862 235666544
No 226
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=89.74 E-value=1.1 Score=43.70 Aligned_cols=74 Identities=26% Similarity=0.288 Sum_probs=49.9
Q ss_pred eEEEEecCC-CCCCCC---------hHHHHHHHHHHHHHHhhcC---CCCcEEEEEeChhHHHHHHHHHh----C-----
Q 012190 206 FEVRCLHIP-VYDRTP---------FEGLVKFVEETVRREHASS---PEKPIYLVGDSFGGCLALAVAAR----N----- 263 (468)
Q Consensus 206 ~~V~~~D~~-G~G~Ss---------~~~~~~dl~~~i~~~~~~~---~~~~i~LvGhS~GG~ia~~~a~~----~----- 263 (468)
.+++-+|.| |-|.|- -+..++++..+++...... ...+++|.|.|+||..+-.+|.. +
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 367888988 777661 1233466666666554434 46799999999999987777654 2
Q ss_pred -CCCceEEEEeCCCCCC
Q 012190 264 -PTIDLILILSNPATSF 279 (468)
Q Consensus 264 -P~~v~~lVli~p~~~~ 279 (468)
+=.++|+++-+|....
T Consensus 82 ~~inLkGi~IGNg~t~~ 98 (319)
T PLN02213 82 PPINLQGYMLGNPVTYM 98 (319)
T ss_pred CceeeeEEEeCCCCCCc
Confidence 1257799998887644
No 227
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=89.08 E-value=1 Score=44.29 Aligned_cols=37 Identities=30% Similarity=0.451 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHh
Q 012190 222 EGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 222 ~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~ 262 (468)
..+.+++..++.. .++-+|.+-|||+||++|..+|..
T Consensus 155 ~~~~~~~~~L~~~----~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIEL----YPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHh----cCCcEEEEecCChHHHHHHHHHHH
Confidence 4566666666665 677799999999999999988764
No 228
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=88.72 E-value=0.61 Score=44.29 Aligned_cols=101 Identities=18% Similarity=0.100 Sum_probs=57.3
Q ss_pred CCCCCeEEEeCCCCCchh--hHHHhHhhh-cC----CeEEEEecCCC-------CCCC--ChHHHHHHHHHHHHHHhhcC
Q 012190 176 LKGSPTLLFLPGIDGLGL--GLILHHKPL-GK----AFEVRCLHIPV-------YDRT--PFEGLVKFVEETVRREHASS 239 (468)
Q Consensus 176 ~~~~p~lV~lHG~~~s~~--~~~~~~~~L-~~----~~~V~~~D~~G-------~G~S--s~~~~~~dl~~~i~~~~~~~ 239 (468)
..+-|++++.||-..... .+. ++..| .. .--++.+|.-- ++.. .+..+++++.=.++..-...
T Consensus 95 ~~k~pvl~~~DG~~~~~~g~i~~-~~dsli~~g~i~pai~vgid~~d~~~R~~~~~~n~~~~~~L~~eLlP~v~~~yp~~ 173 (299)
T COG2382 95 LEKYPVLYLQDGQDWFRSGRIPR-ILDSLIAAGEIPPAILVGIDYIDVKKRREELHCNEAYWRFLAQELLPYVEERYPTS 173 (299)
T ss_pred cccccEEEEeccHHHHhcCChHH-HHHHHHHcCCCCCceEEecCCCCHHHHHHHhcccHHHHHHHHHHhhhhhhccCccc
Confidence 446789999997432221 122 22233 22 24445555321 0111 13344444444444322111
Q ss_pred -CCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 240 -PEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 240 -~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
....-+|.|.|+||.+++..+.+||+.+..++..+|..
T Consensus 174 ~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~ 212 (299)
T COG2382 174 ADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSF 212 (299)
T ss_pred ccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCcc
Confidence 12345699999999999999999999998888877654
No 229
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=88.45 E-value=0.85 Score=42.72 Aligned_cols=51 Identities=20% Similarity=0.313 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCC
Q 012190 223 GLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNP 275 (468)
Q Consensus 223 ~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p 275 (468)
.+-.+..+++..++...+...+.|-|||+||++|..+..++. +-.+..-+|
T Consensus 257 ryySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T KOG4540|consen 257 RYYSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred chhHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 334444555555555678889999999999999999988873 333444444
No 230
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=88.45 E-value=0.85 Score=42.72 Aligned_cols=51 Identities=20% Similarity=0.313 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCC
Q 012190 223 GLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNP 275 (468)
Q Consensus 223 ~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p 275 (468)
.+-.+..+++..++...+...+.|-|||+||++|..+..++. +-.+..-+|
T Consensus 257 ryySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesP 307 (425)
T COG5153 257 RYYSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESP 307 (425)
T ss_pred chhHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCc
Confidence 334444555555555678889999999999999999988873 333444444
No 231
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=85.34 E-value=1.7 Score=45.87 Aligned_cols=99 Identities=10% Similarity=-0.006 Sum_probs=51.6
Q ss_pred CCeEEEeCCCCCchhh---HHH-hHhhh--cCCeEEEEecCC----CC---CCC------ChHHHHHHHHHHHHHHhhc-
Q 012190 179 SPTLLFLPGIDGLGLG---LIL-HHKPL--GKAFEVRCLHIP----VY---DRT------PFEGLVKFVEETVRREHAS- 238 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~---~~~-~~~~L--~~~~~V~~~D~~----G~---G~S------s~~~~~~dl~~~i~~~~~~- 238 (468)
-|++|++||.+-.... +.. ....+ .+..-|+.+.+| |+ |.+ .+.|+...+..+-+++..-
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~gl~Dq~~AL~wv~~~I~~FG 191 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNLGLFDQLLALRWVKDNIPSFG 191 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 6899999998543332 211 11222 223555555554 22 111 2334443333332222211
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHh--CCCCceEEEEeCCCC
Q 012190 239 SPEKPIYLVGDSFGGCLALAVAAR--NPTIDLILILSNPAT 277 (468)
Q Consensus 239 ~~~~~i~LvGhS~GG~ia~~~a~~--~P~~v~~lVli~p~~ 277 (468)
...++|.|+|||.||+.+..+... ....+.++|..++..
T Consensus 192 Gdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 192 GDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNA 232 (545)
T ss_pred CCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccc
Confidence 235789999999999998655532 113555666655543
No 232
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=85.33 E-value=3.6 Score=35.71 Aligned_cols=35 Identities=20% Similarity=0.180 Sum_probs=31.3
Q ss_pred cEEEEEeChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 243 PIYLVGDSFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 243 ~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
.-++-|-||||..|..+.-++|+...++|.+++..
T Consensus 102 s~~~sgcsmGayhA~nfvfrhP~lftkvialSGvY 136 (227)
T COG4947 102 STIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVY 136 (227)
T ss_pred CccccccchhhhhhhhhheeChhHhhhheeeccee
Confidence 34578999999999999999999999999988755
No 233
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=85.04 E-value=36 Score=32.43 Aligned_cols=97 Identities=11% Similarity=0.071 Sum_probs=68.0
Q ss_pred CCeEEEeCCCCCchh-hHHHhHhhhcCCeEEEEecCC-------CCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeC
Q 012190 179 SPTLLFLPGIDGLGL-GLILHHKPLGKAFEVRCLHIP-------VYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~-~~~~~~~~L~~~~~V~~~D~~-------G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS 250 (468)
.|.|+++-.+.|+.. ..+..++.|-....|+.-|+- +-|.-+++|+.+.+.+++..++. .+++++.+
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alLp~~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~Gp-----~~hv~aVC 177 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALLPYHDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFLGP-----DAHVMAVC 177 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhccccceeEeeccccceeecccCCccHHHHHHHHHHHHHHhCC-----CCcEEEEe
Confidence 455666666655554 556678888777788888873 44666899999999999998643 35667766
Q ss_pred hh-----HHHHHHHHHhCCCCceEEEEeCCCCCCC
Q 012190 251 FG-----GCLALAVAARNPTIDLILILSNPATSFG 280 (468)
Q Consensus 251 ~G-----G~ia~~~a~~~P~~v~~lVli~p~~~~~ 280 (468)
.- +++++..+...|..-..+++++++....
T Consensus 178 QP~vPvLAAisLM~~~~~p~~PssMtlmGgPIDaR 212 (415)
T COG4553 178 QPTVPVLAAISLMEEDGDPNVPSSMTLMGGPIDAR 212 (415)
T ss_pred cCCchHHHHHHHHHhcCCCCCCceeeeecCccccc
Confidence 54 4555555556777888999998877443
No 234
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=83.39 E-value=1.7 Score=43.17 Aligned_cols=96 Identities=15% Similarity=0.020 Sum_probs=73.9
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCC----------ChHHHHHHHHHHHHHHhhcCCCCcEEEE
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRT----------PFEGLVKFVEETVRREHASSPEKPIYLV 247 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~S----------s~~~~~~dl~~~i~~~~~~~~~~~i~Lv 247 (468)
+.|+|+..-|++.+..-...-...|- +-+-+.+.+|-+|.| ++++-+.|...+++.++.-.++ +-+--
T Consensus 62 drPtV~~T~GY~~~~~p~r~Ept~Ll-d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~-kWIST 139 (448)
T PF05576_consen 62 DRPTVLYTEGYNVSTSPRRSEPTQLL-DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPG-KWIST 139 (448)
T ss_pred CCCeEEEecCcccccCccccchhHhh-ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccC-Cceec
Confidence 57899999999886543322222221 345677899999988 5788899999999998876554 67789
Q ss_pred EeChhHHHHHHHHHhCCCCceEEEE-eCC
Q 012190 248 GDSFGGCLALAVAARNPTIDLILIL-SNP 275 (468)
Q Consensus 248 GhS~GG~ia~~~a~~~P~~v~~lVl-i~p 275 (468)
|-|-||+.++.+=.-||+.|++.|. ++|
T Consensus 140 G~SKGGmTa~y~rrFyP~DVD~tVaYVAP 168 (448)
T PF05576_consen 140 GGSKGGMTAVYYRRFYPDDVDGTVAYVAP 168 (448)
T ss_pred CcCCCceeEEEEeeeCCCCCCeeeeeecc
Confidence 9999999999888889999999888 444
No 235
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=82.33 E-value=1.6 Score=42.55 Aligned_cols=47 Identities=13% Similarity=0.231 Sum_probs=40.3
Q ss_pred ccCCceEEEEEeCCCCCCCcHHHHHHHHHhCCC-cEEEEeCCCCccccc
Q 012190 376 HAVKAEVLVLASGKDNMLPSEDEAKRLNNSLQN-CIVRNFKDNGHTLLL 423 (468)
Q Consensus 376 ~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~-~~~~~i~~aGH~~~~ 423 (468)
.++..|..++.|..|.+.+++ .+..+...+|+ +-+..+|+..|...-
T Consensus 326 ~RLalpKyivnaSgDdff~pD-sa~lYyd~LPG~kaLrmvPN~~H~~~n 373 (507)
T COG4287 326 LRLALPKYIVNASGDDFFVPD-SANLYYDDLPGEKALRMVPNDPHNLIN 373 (507)
T ss_pred hhccccceeecccCCcccCCC-ccceeeccCCCceeeeeCCCCcchhhH
Confidence 567889999999999999999 68889999985 467889999998754
No 236
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=82.22 E-value=20 Score=35.26 Aligned_cols=61 Identities=23% Similarity=0.244 Sum_probs=45.7
Q ss_pred CCceEEEEEeCCCCCCCcHHHHHHHHHhCC----CcEEEEeCCCCcccccc-CcHHHHHHHHhcCcccc
Q 012190 378 VKAEVLVLASGKDNMLPSEDEAKRLNNSLQ----NCIVRNFKDNGHTLLLE-EGISLLTIIKGTCKYRR 441 (468)
Q Consensus 378 i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~----~~~~~~i~~aGH~~~~e-~p~~~~~~I~~~~F~~r 441 (468)
...+.+.+.+..|.++|.+ +.+++.+... +.+.+-+.++-|..++. .|....+... +|++.
T Consensus 224 ~~~~~ly~~s~~d~v~~~~-~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~--~Fl~~ 289 (350)
T KOG2521|consen 224 LPWNQLYLYSDNDDVLPAD-EIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCS--EFLRS 289 (350)
T ss_pred ccccceeecCCccccccHH-HHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHH--HHHHh
Confidence 3568889999999999999 6887755442 45666678899998775 7888777777 56544
No 237
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=81.96 E-value=5.5 Score=36.72 Aligned_cols=41 Identities=24% Similarity=0.268 Sum_probs=27.6
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhC
Q 012190 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARN 263 (468)
Q Consensus 221 ~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~ 263 (468)
..+=++.+.+.++.... ...+++++|+|+|+.++...+.+.
T Consensus 29 v~~G~~~L~~ai~~~~~--~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 29 VAEGVANLDAAIRAAIA--AGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred HHHHHHHHHHHHHhhcc--CCCCEEEEEECHHHHHHHHHHHHH
Confidence 34444455555554222 466899999999999998777653
No 238
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=78.51 E-value=2.8 Score=43.45 Aligned_cols=36 Identities=28% Similarity=0.424 Sum_probs=23.2
Q ss_pred HHHHHHHHHHhhc-CC-CCcEEEEEeChhHHHHHHHHH
Q 012190 226 KFVEETVRREHAS-SP-EKPIYLVGDSFGGCLALAVAA 261 (468)
Q Consensus 226 ~dl~~~i~~~~~~-~~-~~~i~LvGhS~GG~ia~~~a~ 261 (468)
....++++++... .+ .++|+.+||||||.++=.+..
T Consensus 508 ~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLl 545 (697)
T KOG2029|consen 508 ARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLL 545 (697)
T ss_pred HHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHH
Confidence 3333444444322 23 689999999999988765543
No 239
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=78.40 E-value=5.6 Score=38.88 Aligned_cols=58 Identities=17% Similarity=0.147 Sum_probs=45.2
Q ss_pred CceEEEEEeCCCCCCCcHHHHHHHHHhCC------------------------C-cEEEEeCCCCccccccCcHHHHHHH
Q 012190 379 KAEVLVLASGKDNMLPSEDEAKRLNNSLQ------------------------N-CIVRNFKDNGHTLLLEEGISLLTII 433 (468)
Q Consensus 379 ~~PvLlI~G~~D~~v~~~~~~~~l~~~l~------------------------~-~~~~~i~~aGH~~~~e~p~~~~~~I 433 (468)
.++||+..|+.|.+++.. ..+.+.+.+. + .+++.+.+|||++. ++|+...+.+
T Consensus 233 ~i~VliY~Gd~D~icn~~-g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~ 310 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFL-ATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMF 310 (319)
T ss_pred CceEEEEECCcCeeCCcH-hHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHH
Confidence 479999999999999987 5666655442 2 45667779999996 6999999999
Q ss_pred HhcCccc
Q 012190 434 KGTCKYR 440 (468)
Q Consensus 434 ~~~~F~~ 440 (468)
. .|+.
T Consensus 311 ~--~fi~ 315 (319)
T PLN02213 311 Q--RWIS 315 (319)
T ss_pred H--HHHc
Confidence 8 4553
No 240
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=75.23 E-value=4.4 Score=41.93 Aligned_cols=79 Identities=16% Similarity=0.149 Sum_probs=54.2
Q ss_pred hHhhhcCCeEEEEecCCCCCCC---------------------ChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHH
Q 012190 198 HHKPLGKAFEVRCLHIPVYDRT---------------------PFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLA 256 (468)
Q Consensus 198 ~~~~L~~~~~V~~~D~~G~G~S---------------------s~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia 256 (468)
....+.++|.+..=|- ||..+ .+.+.+..-.++++..-.+ +.+.-+..|.|-||--+
T Consensus 52 ~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~-~p~~sY~~GcS~GGRqg 129 (474)
T PF07519_consen 52 MATALARGYATASTDS-GHQGSAGSDDASFGNNPEALLDFAYRALHETTVVAKALIEAFYGK-APKYSYFSGCSTGGRQG 129 (474)
T ss_pred cchhhhcCeEEEEecC-CCCCCcccccccccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCC-CCCceEEEEeCCCcchH
Confidence 4556788888888773 33222 1222233333344433222 34567899999999999
Q ss_pred HHHHHhCCCCceEEEEeCCCCC
Q 012190 257 LAVAARNPTIDLILILSNPATS 278 (468)
Q Consensus 257 ~~~a~~~P~~v~~lVli~p~~~ 278 (468)
+..|.++|+..+|+|.-+|+..
T Consensus 130 l~~AQryP~dfDGIlAgaPA~~ 151 (474)
T PF07519_consen 130 LMAAQRYPEDFDGILAGAPAIN 151 (474)
T ss_pred HHHHHhChhhcCeEEeCCchHH
Confidence 9999999999999999999873
No 241
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=72.01 E-value=33 Score=27.17 Aligned_cols=64 Identities=25% Similarity=0.271 Sum_probs=41.4
Q ss_pred CeEEEEecCCCCCCC-------Ch-HHHHHHHHHHHHHHhhcCCCCcEEEEEeChh--HHHHHHHHHhCCCCceEEEE
Q 012190 205 AFEVRCLHIPVYDRT-------PF-EGLVKFVEETVRREHASSPEKPIYLVGDSFG--GCLALAVAARNPTIDLILIL 272 (468)
Q Consensus 205 ~~~V~~~D~~G~G~S-------s~-~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~G--G~ia~~~a~~~P~~v~~lVl 272 (468)
++..-.+.++..|.+ .. +.=...+..+++. .+..+++|||-|-- --+-..+|.++|++|.++.+
T Consensus 24 ~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~----fP~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~ai~I 97 (100)
T PF09949_consen 24 GFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRD----FPERKFILIGDSGQHDPEIYAEIARRFPGRILAIYI 97 (100)
T ss_pred CCCCCceEcccCCccccccccCCchhHHHHHHHHHHHH----CCCCcEEEEeeCCCcCHHHHHHHHHHCCCCEEEEEE
Confidence 354444555555433 11 2334445555554 89999999998865 44556788999999987754
No 242
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=71.93 E-value=13 Score=38.78 Aligned_cols=100 Identities=21% Similarity=0.185 Sum_probs=58.9
Q ss_pred CeEEEeCCCCCchhhHHH---hHhhh--cCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHh---h--cCCCCcEEEEEe
Q 012190 180 PTLLFLPGIDGLGLGLIL---HHKPL--GKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREH---A--SSPEKPIYLVGD 249 (468)
Q Consensus 180 p~lV~lHG~~~s~~~~~~---~~~~L--~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~---~--~~~~~~i~LvGh 249 (468)
-.|+-+||.|.....-+. ..+.+ +-+..|+.+|+-=.-+..+..-.+.+....-.+. . ....++|+++|.
T Consensus 397 sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSLAPEaPFPRaleEv~fAYcW~inn~allG~TgEriv~aGD 476 (880)
T KOG4388|consen 397 SLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSLAPEAPFPRALEEVFFAYCWAINNCALLGSTGERIVLAGD 476 (880)
T ss_pred eEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeeccCCCCCCCcHHHHHHHHHHHHhcCHHHhCcccceEEEecc
Confidence 366778998766553222 22222 2368899999865555555444444333222211 1 123679999999
Q ss_pred ChhHHHHHHHHHh----CCCCceEEEEeCCCCCC
Q 012190 250 SFGGCLALAVAAR----NPTIDLILILSNPATSF 279 (468)
Q Consensus 250 S~GG~ia~~~a~~----~P~~v~~lVli~p~~~~ 279 (468)
|.||.+++..|.+ .=..-+|+++.-+++-+
T Consensus 477 SAGgNL~~~VaLr~i~~gvRvPDGl~laY~ptl~ 510 (880)
T KOG4388|consen 477 SAGGNLCFTVALRAIAYGVRVPDGLMLAYPPTLL 510 (880)
T ss_pred CCCcceeehhHHHHHHhCCCCCCceEEecChhhc
Confidence 9999876655543 22334688888776643
No 243
>PLN02209 serine carboxypeptidase
Probab=67.53 E-value=15 Score=37.69 Aligned_cols=55 Identities=18% Similarity=0.187 Sum_probs=44.5
Q ss_pred CceEEEEEeCCCCCCCcHHHHHHHHHhCC------------------------C-cEEEEeCCCCccccccCcHHHHHHH
Q 012190 379 KAEVLVLASGKDNMLPSEDEAKRLNNSLQ------------------------N-CIVRNFKDNGHTLLLEEGISLLTII 433 (468)
Q Consensus 379 ~~PvLlI~G~~D~~v~~~~~~~~l~~~l~------------------------~-~~~~~i~~aGH~~~~e~p~~~~~~I 433 (468)
.++||+..|+.|-+++.. ..+.+.+.+. + .+++.+.+|||++. ++|++..+.+
T Consensus 351 girVLiY~GD~D~icn~~-Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~ 428 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQ-ATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMF 428 (437)
T ss_pred CceEEEEECCccccCCcH-hHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHH
Confidence 479999999999999988 5666665542 2 45677889999996 6999999999
Q ss_pred Hh
Q 012190 434 KG 435 (468)
Q Consensus 434 ~~ 435 (468)
.+
T Consensus 429 ~~ 430 (437)
T PLN02209 429 QR 430 (437)
T ss_pred HH
Confidence 94
No 244
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=65.28 E-value=12 Score=38.42 Aligned_cols=47 Identities=19% Similarity=0.171 Sum_probs=34.8
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHh-----CCCCceEEEEeCCCCCCCCCCcC
Q 012190 239 SPEKPIYLVGDSFGGCLALAVAAR-----NPTIDLILILSNPATSFGRSQLQ 285 (468)
Q Consensus 239 ~~~~~i~LvGhS~GG~ia~~~a~~-----~P~~v~~lVli~p~~~~~~~~~~ 285 (468)
.+.+||.|||+|+|+-+...+... .-..|..+++++.+.......|.
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~~~w~ 495 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKAKLWL 495 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCHHHHH
Confidence 468899999999999997766642 23578889998877655544443
No 245
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=64.59 E-value=22 Score=35.20 Aligned_cols=83 Identities=14% Similarity=0.055 Sum_probs=59.0
Q ss_pred CeEEEeCCC-------CCchhhHHHhHhhhcCCeEEEEecC--CCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeC
Q 012190 180 PTLLFLPGI-------DGLGLGLILHHKPLGKAFEVRCLHI--PVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDS 250 (468)
Q Consensus 180 p~lV~lHG~-------~~s~~~~~~~~~~L~~~~~V~~~D~--~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS 250 (468)
..||++||- .-+...|..++..+.+.-.+-.+|+ -|+|.- +++-+.-+..++.. .+ + +++..|
T Consensus 172 ~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~G-leeDa~~lR~~a~~----~~--~-~lva~S 243 (396)
T COG1448 172 GSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADG-LEEDAYALRLFAEV----GP--E-LLVASS 243 (396)
T ss_pred CCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccc-hHHHHHHHHHHHHh----CC--c-EEEEeh
Confidence 358999964 4455689999988865555555665 455433 78777777777775 22 2 788999
Q ss_pred hhHHHHHHHHHhCCCCceEEEEeCC
Q 012190 251 FGGCLALAVAARNPTIDLILILSNP 275 (468)
Q Consensus 251 ~GG~ia~~~a~~~P~~v~~lVli~p 275 (468)
+.=..++ |.++|-++.+++.
T Consensus 244 ~SKnfgL-----YgERVGa~~vva~ 263 (396)
T COG1448 244 FSKNFGL-----YGERVGALSVVAE 263 (396)
T ss_pred hhhhhhh-----hhhccceeEEEeC
Confidence 8776665 6789999999865
No 246
>PRK12467 peptide synthase; Provisional
Probab=59.94 E-value=25 Score=46.56 Aligned_cols=93 Identities=20% Similarity=0.099 Sum_probs=66.5
Q ss_pred CCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCC-----CCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhH
Q 012190 179 SPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYD-----RTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGG 253 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G-----~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG 253 (468)
.+.+++.|...+....+.++...|.....++.+..++.- ..+++.++....+.+... .+..+..+.|+|+||
T Consensus 3692 ~~~l~~~h~~~r~~~~~~~l~~~l~~~~~~~~l~~~~~~~d~~~~~~~~~~~~~y~~~~~~~---~~~~p~~l~g~s~g~ 3768 (3956)
T PRK12467 3692 FPALFCRHEGLGTVFDYEPLAVILEGDRHVLGLTCRHLLDDGWQDTSLQAMAVQYADYILWQ---QAKGPYGLLGWSLGG 3768 (3956)
T ss_pred ccceeeechhhcchhhhHHHHHHhCCCCcEEEEeccccccccCCccchHHHHHHHHHHHHHh---ccCCCeeeeeeecch
Confidence 356999999999988888888888777788887766542 235666666666666553 344578999999999
Q ss_pred HHHHHHHHh---CCCCceEEEEeC
Q 012190 254 CLALAVAAR---NPTIDLILILSN 274 (468)
Q Consensus 254 ~ia~~~a~~---~P~~v~~lVli~ 274 (468)
.++..++.. ..+.+.-+.+++
T Consensus 3769 ~~a~~~~~~l~~~g~~~~~~~~~~ 3792 (3956)
T PRK12467 3769 TLARLVAELLEREGESEAFLGLFD 3792 (3956)
T ss_pred HHHHHHHHHHHHcCCceeEEEEEe
Confidence 999887764 345555555553
No 247
>PF03283 PAE: Pectinacetylesterase
Probab=55.77 E-value=47 Score=33.08 Aligned_cols=39 Identities=31% Similarity=0.301 Sum_probs=27.7
Q ss_pred CCcEEEEEeChhHHHHHHHH----HhCCCCceEEEEeCCCCCC
Q 012190 241 EKPIYLVGDSFGGCLALAVA----ARNPTIDLILILSNPATSF 279 (468)
Q Consensus 241 ~~~i~LvGhS~GG~ia~~~a----~~~P~~v~~lVli~p~~~~ 279 (468)
.++|+|-|.|.||.-++..+ ...|..++...+.++...+
T Consensus 155 a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f~ 197 (361)
T PF03283_consen 155 AKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFFL 197 (361)
T ss_pred cceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccccccc
Confidence 46899999999998887554 4467666666666665433
No 248
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=55.57 E-value=15 Score=32.75 Aligned_cols=47 Identities=13% Similarity=0.147 Sum_probs=35.2
Q ss_pred CceEEEEEeCCCCCCCcHHHHHHHHHh---CC--CcEEEEeCCCCccccccCc
Q 012190 379 KAEVLVLASGKDNMLPSEDEAKRLNNS---LQ--NCIVRNFKDNGHTLLLEEG 426 (468)
Q Consensus 379 ~~PvLlI~G~~D~~v~~~~~~~~l~~~---l~--~~~~~~i~~aGH~~~~e~p 426 (468)
++++|-|-|+.|.++.+. ..+..... +| ....++.+|+||+..+.-+
T Consensus 134 ~taLlTVEGe~DDIsg~G-QT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~ 185 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPG-QTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGS 185 (202)
T ss_pred cceeEEeecCcccCCcch-HHHHHHHHhcCCCHHHhhhcccCCCCeeecccch
Confidence 467888999999999987 45554444 44 3467788999999887644
No 249
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=54.27 E-value=65 Score=26.71 Aligned_cols=59 Identities=15% Similarity=0.227 Sum_probs=38.5
Q ss_pred CCCCeEEEeCCCCCchhhHHH--hHhhh-cCC-------eEEEEecCCCCCCCChHHHHHHHHHHHHHHhh
Q 012190 177 KGSPTLLFLPGIDGLGLGLIL--HHKPL-GKA-------FEVRCLHIPVYDRTPFEGLVKFVEETVRREHA 237 (468)
Q Consensus 177 ~~~p~lV~lHG~~~s~~~~~~--~~~~L-~~~-------~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~ 237 (468)
+.+|.|+-+||..|.+..|.. +++.| .++ .-+-..|+|- .+.++++-+++...|...-.
T Consensus 50 p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G~~S~~V~~f~~~~hFP~--~~~v~~Yk~~L~~~I~~~v~ 118 (127)
T PF06309_consen 50 PRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSGMKSPFVHQFIATHHFPH--NSNVDEYKEQLKSWIRGNVS 118 (127)
T ss_pred CCCCEEEEeecCCCCcHHHHHHHHHHHHHhcccCCCceeeecccccCCC--chHHHHHHHHHHHHHHHHHH
Confidence 468899999999999997754 44554 221 1223456662 24677777777777776443
No 250
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=51.61 E-value=1.8e+02 Score=29.27 Aligned_cols=93 Identities=17% Similarity=0.164 Sum_probs=64.3
Q ss_pred CeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCCC-----------------C-------------hHHHHHHH
Q 012190 180 PTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDRT-----------------P-------------FEGLVKFV 228 (468)
Q Consensus 180 p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~S-----------------s-------------~~~~~~dl 228 (468)
|+|+++--+..-...+..+...+ +.+.+++.+|.--.|.. + ++.+.+.+
T Consensus 2 ~tI~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga 81 (403)
T PF06792_consen 2 KTIAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGA 81 (403)
T ss_pred CEEEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHH
Confidence 45666666666666777777777 67899999986333322 0 45556666
Q ss_pred HHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEE
Q 012190 229 EETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILIL 272 (468)
Q Consensus 229 ~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVl 272 (468)
..++..+..+..-.-|+-+|-|.|..++.......|=-+=++++
T Consensus 82 ~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPiG~PKlmV 125 (403)
T PF06792_consen 82 ARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPIGFPKLMV 125 (403)
T ss_pred HHHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCCCCCeEEE
Confidence 66666665544445688899999999999999888866666665
No 251
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=51.14 E-value=43 Score=30.24 Aligned_cols=53 Identities=9% Similarity=0.027 Sum_probs=44.5
Q ss_pred eEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeCh----hHHHHHHHHHhC
Q 012190 206 FEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSF----GGCLALAVAARN 263 (468)
Q Consensus 206 ~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~----GG~ia~~~a~~~ 263 (468)
-+|+..|.++....+.+.+++.+.++++... -.++|+|+|. |..++..+|++.
T Consensus 78 d~V~~~~~~~~~~~~~e~~a~al~~~i~~~~-----p~lVL~~~t~~~~~grdlaprlAarL 134 (202)
T cd01714 78 DRAILVSDRAFAGADTLATAKALAAAIKKIG-----VDLILTGKQSIDGDTGQVGPLLAELL 134 (202)
T ss_pred CEEEEEecccccCCChHHHHHHHHHHHHHhC-----CCEEEEcCCcccCCcCcHHHHHHHHh
Confidence 4788889888888888999999999887632 3689999999 889999999885
No 252
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=49.13 E-value=1.7e+02 Score=28.56 Aligned_cols=85 Identities=20% Similarity=0.147 Sum_probs=51.7
Q ss_pred CCCeEEEeCCCC----Cch-hhHHHhHhhh--cCCeEEEEecCCCCCCCCh--------------------HHHHHHHHH
Q 012190 178 GSPTLLFLPGID----GLG-LGLILHHKPL--GKAFEVRCLHIPVYDRTPF--------------------EGLVKFVEE 230 (468)
Q Consensus 178 ~~p~lV~lHG~~----~s~-~~~~~~~~~L--~~~~~V~~~D~~G~G~Ss~--------------------~~~~~dl~~ 230 (468)
.+..|+|+-|.. ... .....+...| +++-+++++-.+|-|.-.+ ..+.+-|..
T Consensus 30 ~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~~ 109 (423)
T COG3673 30 MKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIRE 109 (423)
T ss_pred cceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHHH
Confidence 355788887752 222 2444555666 3568888888888775411 122333333
Q ss_pred HHHHHhhc-CCCCcEEEEEeChhHHHHHHHHHh
Q 012190 231 TVRREHAS-SPEKPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 231 ~i~~~~~~-~~~~~i~LvGhS~GG~ia~~~a~~ 262 (468)
+...+... .++..|+++|+|-|+.+|--+|..
T Consensus 110 AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 110 AYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 33322211 367899999999999998777754
No 253
>PRK02399 hypothetical protein; Provisional
Probab=46.70 E-value=2.9e+02 Score=27.94 Aligned_cols=94 Identities=16% Similarity=0.119 Sum_probs=61.0
Q ss_pred CeEEEeCCCCCchhhHHHhHhhh-cCCeEEEEecCCCCCC-------C----------C-------------hHHHHHHH
Q 012190 180 PTLLFLPGIDGLGLGLILHHKPL-GKAFEVRCLHIPVYDR-------T----------P-------------FEGLVKFV 228 (468)
Q Consensus 180 p~lV~lHG~~~s~~~~~~~~~~L-~~~~~V~~~D~~G~G~-------S----------s-------------~~~~~~dl 228 (468)
+.|+++--+..-+..+..+...+ ..+..|+.+|.-..|. | + ++.+.+-.
T Consensus 4 ~~I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga 83 (406)
T PRK02399 4 KRIYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGA 83 (406)
T ss_pred CEEEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHH
Confidence 45555555555555666666666 5579999999733321 1 1 34455555
Q ss_pred HHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEe
Q 012190 229 EETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILS 273 (468)
Q Consensus 229 ~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli 273 (468)
..++..+..+..-.-++-+|-|.|..++.......|=-+=++++.
T Consensus 84 ~~~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlmVS 128 (406)
T PRK02399 84 AAFVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLMVS 128 (406)
T ss_pred HHHHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEEEE
Confidence 556655544444556888999999999999988888766666653
No 254
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=36.32 E-value=99 Score=29.44 Aligned_cols=24 Identities=42% Similarity=0.445 Sum_probs=20.3
Q ss_pred CCCCcEEEEEeChhHHHHHHHHHh
Q 012190 239 SPEKPIYLVGDSFGGCLALAVAAR 262 (468)
Q Consensus 239 ~~~~~i~LvGhS~GG~ia~~~a~~ 262 (468)
.+..+|+++|.|-||..|-.+|..
T Consensus 89 ~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 89 EPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred CCcceEEEEecCccHHHHHHHHHH
Confidence 356789999999999999888854
No 255
>PF11770 GAPT: GRB2-binding adapter (GAPT); InterPro: IPR021082 This entry represents a family of transmembrane proteins which bind the growth factor receptor-bound protein 2 (GRB2) in B cells []. In contrast to other transmembrane adaptor proteins, GAPT, which this entry represents, is not phosphorylated upon BCR ligation. It associates with GRB2 constitutively through its proline-rich region [].
Probab=35.84 E-value=37 Score=28.70 Aligned_cols=19 Identities=37% Similarity=0.223 Sum_probs=13.6
Q ss_pred CCcEEeehHHHHHHhhhhh
Q 012190 34 SGKILIFIPLLFKTMASVI 52 (468)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~ 52 (468)
+..+++-|.||++++.||+
T Consensus 9 sv~i~igi~Ll~lLl~cgi 27 (158)
T PF11770_consen 9 SVAISIGISLLLLLLLCGI 27 (158)
T ss_pred hHHHHHHHHHHHHHHHHhc
Confidence 3455667788888888884
No 256
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=33.98 E-value=50 Score=34.24 Aligned_cols=61 Identities=11% Similarity=0.072 Sum_probs=44.0
Q ss_pred cccCCceEEEEEeCCCCCCCcHHHHHHHHHhC----C--------CcEEEEeCCCCcccccc--CcHHHHHHHHhc
Q 012190 375 LHAVKAEVLVLASGKDNMLPSEDEAKRLNNSL----Q--------NCIVRNFKDNGHTLLLE--EGISLLTIIKGT 436 (468)
Q Consensus 375 l~~i~~PvLlI~G~~D~~v~~~~~~~~l~~~l----~--------~~~~~~i~~aGH~~~~e--~p~~~~~~I~~~ 436 (468)
+++-.-.+++.||..|.++++. ....+++.. + -.++..+||.+|+.--. .+-.....|.+|
T Consensus 349 F~~~GGKLI~~HG~aD~~I~p~-~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~W 423 (474)
T PF07519_consen 349 FRARGGKLILYHGWADPLIPPQ-GTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDW 423 (474)
T ss_pred HHhcCCeEEEEecCCCCccCCC-cHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHH
Confidence 3444678999999999999998 565555433 2 14889999999996544 455666677755
No 257
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=33.07 E-value=49 Score=29.21 Aligned_cols=29 Identities=24% Similarity=0.385 Sum_probs=16.2
Q ss_pred ChHHHHHHHHHHHHHHhhcCCCCcEEEEE
Q 012190 220 PFEGLVKFVEETVRREHASSPEKPIYLVG 248 (468)
Q Consensus 220 s~~~~~~dl~~~i~~~~~~~~~~~i~LvG 248 (468)
+.+.+.+.+..+++.++..+|..||+++-
T Consensus 72 ~~~~~~~~~~~fv~~iR~~hP~tPIllv~ 100 (178)
T PF14606_consen 72 SPEEFRERLDGFVKTIREAHPDTPILLVS 100 (178)
T ss_dssp CTTTHHHHHHHHHHHHHTT-SSS-EEEEE
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCEEEEe
Confidence 44556666666666666666666665554
No 258
>PHA02655 hypothetical protein; Provisional
Probab=29.85 E-value=26 Score=25.28 Aligned_cols=17 Identities=12% Similarity=0.454 Sum_probs=13.9
Q ss_pred EeehHHHHHHhhhhhcC
Q 012190 38 LIFIPLLFKTMASVINF 54 (468)
Q Consensus 38 ~~~~~~~~~~~~~~~~~ 54 (468)
+.+||+.|+|.+|.++-
T Consensus 67 iylipfvivmisciflv 83 (94)
T PHA02655 67 IYLIPFVIVMISCIFLV 83 (94)
T ss_pred hhHHHHHHHHHHHHHhh
Confidence 35789999999999753
No 259
>KOG1752 consensus Glutaredoxin and related proteins [Posttranslational modification, protein turnover, chaperones]
Probab=29.12 E-value=3e+02 Score=21.93 Aligned_cols=78 Identities=14% Similarity=0.114 Sum_probs=48.6
Q ss_pred CCCeEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHH
Q 012190 178 GSPTLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLAL 257 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~ 257 (468)
..|+|||.--+-........+...+.-.+.|+-+|...+|. ++.+.+..+ .....-..|++-|...||.--+
T Consensus 13 ~~~VVifSKs~C~~c~~~k~ll~~~~v~~~vvELD~~~~g~----eiq~~l~~~----tg~~tvP~vFI~Gk~iGG~~dl 84 (104)
T KOG1752|consen 13 ENPVVIFSKSSCPYCHRAKELLSDLGVNPKVVELDEDEDGS----EIQKALKKL----TGQRTVPNVFIGGKFIGGASDL 84 (104)
T ss_pred cCCEEEEECCcCchHHHHHHHHHhCCCCCEEEEccCCCCcH----HHHHHHHHh----cCCCCCCEEEECCEEEcCHHHH
Confidence 46788887744433334444555556678899999887764 333333333 2112334788999999998877
Q ss_pred HHHHhC
Q 012190 258 AVAARN 263 (468)
Q Consensus 258 ~~a~~~ 263 (468)
......
T Consensus 85 ~~lh~~ 90 (104)
T KOG1752|consen 85 MALHKS 90 (104)
T ss_pred HHHHHc
Confidence 655554
No 260
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=28.90 E-value=81 Score=31.77 Aligned_cols=56 Identities=13% Similarity=0.083 Sum_probs=37.1
Q ss_pred CCceEEEEEeCCCCCCCcHHHHHHHHHhCCCcEEEEeCCCCcccccc-----CcHHHHHHHHhc
Q 012190 378 VKAEVLVLASGKDNMLPSEDEAKRLNNSLQNCIVRNFKDNGHTLLLE-----EGISLLTIIKGT 436 (468)
Q Consensus 378 i~~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~~~~~i~~aGH~~~~e-----~p~~~~~~I~~~ 436 (468)
-.-.+|+|+|++|++.... -.+.+.-.++.+.+.||+.|..-+. .-.+....|.+|
T Consensus 350 ~~~rmlFVYG~nDPW~A~~---f~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~W 410 (448)
T PF05576_consen 350 NGPRMLFVYGENDPWSAEP---FRLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRW 410 (448)
T ss_pred CCCeEEEEeCCCCCcccCc---cccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHH
Confidence 3457999999999996543 1122222367888899999985543 344556666666
No 261
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=28.37 E-value=3.1e+02 Score=21.90 Aligned_cols=75 Identities=16% Similarity=0.216 Sum_probs=51.2
Q ss_pred eEEEeCCCCCchhhHHHhHhhh-cC-CeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHH
Q 012190 181 TLLFLPGIDGLGLGLILHHKPL-GK-AFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALA 258 (468)
Q Consensus 181 ~lV~lHG~~~s~~~~~~~~~~L-~~-~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~ 258 (468)
.||..|| .-+..+...++.+ .. ...+.++++.- ..+.+++.+.+.+.++... ..+.++++--=+||.....
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G~~~~~i~~~~~~~--~~~~~~~~~~l~~~i~~~~---~~~~vlil~Dl~ggsp~n~ 74 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILGEDQDNIEAVDLYP--DESIEDFEEKLEEAIEELD---EGDGVLILTDLGGGSPFNE 74 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHTSTCSSEEEEEETT--TSCHHHHHHHHHHHHHHCC---TTSEEEEEESSTTSHHHHH
T ss_pred EEEEECc--HHHHHHHHHHHHHcCCCcccEEEEECcC--CCCHHHHHHHHHHHHHhcc---CCCcEEEEeeCCCCccchH
Confidence 4788899 6666777777777 44 34677777542 2467888888888886632 3557878877777776655
Q ss_pred HHHh
Q 012190 259 VAAR 262 (468)
Q Consensus 259 ~a~~ 262 (468)
++..
T Consensus 75 a~~~ 78 (116)
T PF03610_consen 75 AARL 78 (116)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 262
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=27.84 E-value=1.7e+02 Score=25.13 Aligned_cols=58 Identities=19% Similarity=0.122 Sum_probs=38.8
Q ss_pred HHhHhhhcCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHH
Q 012190 196 ILHHKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAV 259 (468)
Q Consensus 196 ~~~~~~L~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~ 259 (468)
..+.+.+.++-.|+++|.+|--.|+ +++++.+..+-+. +..=.++||-|.|=.-++.-
T Consensus 58 ~~il~~i~~~~~vi~Ld~~Gk~~sS-e~fA~~l~~~~~~-----G~~i~f~IGG~~Gl~~~~~~ 115 (155)
T COG1576 58 EAILAAIPKGSYVVLLDIRGKALSS-EEFADFLERLRDD-----GRDISFLIGGADGLSEAVKA 115 (155)
T ss_pred HHHHHhcCCCCeEEEEecCCCcCCh-HHHHHHHHHHHhc-----CCeEEEEEeCcccCCHHHHH
Confidence 3456777788899999999877664 4555555555442 23345789999995555543
No 263
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=27.26 E-value=1.7e+02 Score=27.93 Aligned_cols=19 Identities=32% Similarity=0.429 Sum_probs=16.6
Q ss_pred EEEEeChhHHHHHHHHHhC
Q 012190 245 YLVGDSFGGCLALAVAARN 263 (468)
Q Consensus 245 ~LvGhS~GG~ia~~~a~~~ 263 (468)
.+.|-|.||.+|+.+|...
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 6899999999999998654
No 264
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=26.12 E-value=2.3e+02 Score=27.38 Aligned_cols=21 Identities=19% Similarity=0.188 Sum_probs=18.2
Q ss_pred cEEEEEeChhHHHHHHHHHhC
Q 012190 243 PIYLVGDSFGGCLALAVAARN 263 (468)
Q Consensus 243 ~i~LvGhS~GG~ia~~~a~~~ 263 (468)
.=.++|-|+||.++..+|+.+
T Consensus 44 ~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 44 VDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred CCEEEEECHHHHHHHHHHcCC
Confidence 447899999999999999875
No 265
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=25.35 E-value=2e+02 Score=24.87 Aligned_cols=52 Identities=19% Similarity=0.091 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHHHhCCCCceEEEEeCC
Q 012190 222 EGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVAARNPTIDLILILSNP 275 (468)
Q Consensus 222 ~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a~~~P~~v~~lVli~p 275 (468)
+...+.+.++++.+... +++|.++|-|..|..-+.++-..++.+..++=.+|
T Consensus 51 ~~~~~~l~~~L~~~~~~--gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np 102 (160)
T PF08484_consen 51 EQSKAELREFLEKLKAE--GKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNP 102 (160)
T ss_dssp HHHHHHHHHHHHHHHHT--T--EEEE---SHHHHHHHHHT--TTTS--EEES-G
T ss_pred HHHHHHHHHHHHHHHHc--CCEEEEECcchHHHHHHHHhCCCcceeEEEEeCCh
Confidence 34444555555554433 57899999999999988888776677776665554
No 266
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=25.32 E-value=88 Score=29.91 Aligned_cols=21 Identities=33% Similarity=0.362 Sum_probs=17.0
Q ss_pred CCCcEEEEEeChhHHHHHHHH
Q 012190 240 PEKPIYLVGDSFGGCLALAVA 260 (468)
Q Consensus 240 ~~~~i~LvGhS~GG~ia~~~a 260 (468)
+.+|..++|||+|-..|+.++
T Consensus 74 g~~P~~v~GhS~GE~aAa~~a 94 (295)
T TIGR03131 74 LPRPSAVAGYSVGEYAAAVVA 94 (295)
T ss_pred CCCCcEEeecCHHHHHHHHHh
Confidence 456889999999988777655
No 267
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=24.82 E-value=1.3e+02 Score=28.76 Aligned_cols=36 Identities=19% Similarity=0.128 Sum_probs=26.3
Q ss_pred CcEEEEEeChhHHHHHHHH---HhCCCCceEEEEeCCCC
Q 012190 242 KPIYLVGDSFGGCLALAVA---ARNPTIDLILILSNPAT 277 (468)
Q Consensus 242 ~~i~LvGhS~GG~ia~~~a---~~~P~~v~~lVli~p~~ 277 (468)
-+++|.|.|+|+.-+.... ...-+.++|.++.+|+.
T Consensus 109 PkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 109 PKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPF 147 (289)
T ss_pred CeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCC
Confidence 4799999999976654332 23346799999998865
No 268
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=24.74 E-value=58 Score=31.59 Aligned_cols=22 Identities=36% Similarity=0.401 Sum_probs=16.9
Q ss_pred CCCCcEEEEEeChhHHHHHHHH
Q 012190 239 SPEKPIYLVGDSFGGCLALAVA 260 (468)
Q Consensus 239 ~~~~~i~LvGhS~GG~ia~~~a 260 (468)
.+.+|-+++|||+|=..|+.++
T Consensus 81 ~Gi~P~~v~GhSlGE~aA~~aa 102 (318)
T PF00698_consen 81 WGIKPDAVIGHSLGEYAALVAA 102 (318)
T ss_dssp TTHCESEEEESTTHHHHHHHHT
T ss_pred cccccceeeccchhhHHHHHHC
Confidence 3456889999999988777544
No 269
>PF01012 ETF: Electron transfer flavoprotein domain; InterPro: IPR014730 Electron transfer flavoproteins (ETFs) serve as specific electron acceptors for primary dehydrogenases, transferring the electrons to terminal respiratory systems. They can be functionally classified into constitutive, "housekeeping" ETFs, mainly involved in the oxidation of fatty acids (Group I), and ETFs produced by some prokaryotes under specific growth conditions, receiving electrons only from the oxidation of specific substrates (Group II) []. ETFs are heterodimeric proteins composed of an alpha and beta subunit, and contain an FAD cofactor and AMP [, , , , ]. ETF consists of three domains: domains I and II are formed by the N- and C-terminal portions of the alpha subunit, respectively, while domain III is formed by the beta subunit. Domains I and III share an almost identical alpha-beta-alpha sandwich fold, while domain II forms an alpha-beta-alpha sandwich similar to that of bacterial flavodoxins. FAD is bound in a cleft between domains II and III, while domain III binds the AMP molecule. Interactions between domains I and III stabilise the protein, forming a shallow bowl where domain II resides. This entry represents the N-terminal domain of both the alpha and beta subunits from Group I and Group II ETFs.; PDB: 1EFP_B 3FET_B 3IH5_B 2A1T_S 1EFV_B 1T9G_S 2A1U_B 1O96_E 1O94_C 3CLU_C ....
Probab=24.44 E-value=2.5e+02 Score=23.97 Aligned_cols=59 Identities=25% Similarity=0.265 Sum_probs=42.7
Q ss_pred hhhc-CCe-EEEEecCCCCCCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeCh-hHHHHHHHHHhC
Q 012190 200 KPLG-KAF-EVRCLHIPVYDRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSF-GGCLALAVAARN 263 (468)
Q Consensus 200 ~~L~-~~~-~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~-GG~ia~~~a~~~ 263 (468)
..+. .+. +|+.++.+.....+.+.+++.+.+++++... .++|+|++. |.-++..+|++.
T Consensus 52 ~~l~~~G~d~v~~~~~~~~~~~~~~~~a~~l~~~~~~~~~-----~lVl~~~t~~g~~la~~lA~~L 113 (164)
T PF01012_consen 52 KALAKYGADKVYHIDDPALAEYDPEAYADALAELIKEEGP-----DLVLFGSTSFGRDLAPRLAARL 113 (164)
T ss_dssp HHHHSTTESEEEEEE-GGGTTC-HHHHHHHHHHHHHHHT------SEEEEESSHHHHHHHHHHHHHH
T ss_pred hhhhhcCCcEEEEecCccccccCHHHHHHHHHHHHHhcCC-----CEEEEcCcCCCCcHHHHHHHHh
Confidence 3444 554 7888998888878889999999999998332 478899875 677777777764
No 270
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=24.28 E-value=1.1e+02 Score=28.32 Aligned_cols=68 Identities=16% Similarity=0.184 Sum_probs=45.3
Q ss_pred CCeEEEeCCCCCchh--hHHHhHhhh-cCCeEEEEecCCCCCCCChHHHHH-HHHHHHHHHhhcCCCCcEEEEEeChhHH
Q 012190 179 SPTLLFLPGIDGLGL--GLILHHKPL-GKAFEVRCLHIPVYDRTPFEGLVK-FVEETVRREHASSPEKPIYLVGDSFGGC 254 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~--~~~~~~~~L-~~~~~V~~~D~~G~G~Ss~~~~~~-dl~~~i~~~~~~~~~~~i~LvGhS~GG~ 254 (468)
.|+||++.|+.+++. .-..+...| .++++|.++.-|-. ++... .+-.+.+.+ .....|.++=-|+=+-
T Consensus 30 ~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~pt~-----eE~~~p~lwRfw~~l---P~~G~i~IF~rSwY~~ 101 (230)
T TIGR03707 30 ARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKPSD-----RERTQWYFQRYVQHL---PAAGEIVLFDRSWYNR 101 (230)
T ss_pred CCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCCCH-----HHHcChHHHHHHHhC---CCCCeEEEEeCchhhh
Confidence 579999999998887 456778888 77899999876632 33332 233444442 2345777877777444
No 271
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=24.21 E-value=92 Score=29.67 Aligned_cols=22 Identities=36% Similarity=0.338 Sum_probs=17.2
Q ss_pred CCCCcEEEEEeChhHHHHHHHH
Q 012190 239 SPEKPIYLVGDSFGGCLALAVA 260 (468)
Q Consensus 239 ~~~~~i~LvGhS~GG~ia~~~a 260 (468)
.+.+|-.++|||+|-..|+.++
T Consensus 79 ~Gi~p~~~~GhSlGE~aA~~~a 100 (298)
T smart00827 79 WGVRPDAVVGHSLGEIAAAYVA 100 (298)
T ss_pred cCCcccEEEecCHHHHHHHHHh
Confidence 3456789999999988887655
No 272
>PRK03482 phosphoglycerate mutase; Provisional
Probab=24.19 E-value=2.2e+02 Score=25.68 Aligned_cols=42 Identities=14% Similarity=0.125 Sum_probs=28.0
Q ss_pred CCCChHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHHHHH
Q 012190 217 DRTPFEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLALAVA 260 (468)
Q Consensus 217 G~Ss~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~~~a 260 (468)
|.-++.++.+.+..+++.+......+.+.+|+| ||.+.+.++
T Consensus 118 ~gEs~~~~~~Rv~~~l~~~~~~~~~~~vliVsH--g~~i~~l~~ 159 (215)
T PRK03482 118 EGESMQELSDRMHAALESCLELPQGSRPLLVSH--GIALGCLVS 159 (215)
T ss_pred CCccHHHHHHHHHHHHHHHHHhCCCCeEEEEeC--cHHHHHHHH
Confidence 345678888888888877654444567889999 455544333
No 273
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=24.05 E-value=5.2e+02 Score=23.05 Aligned_cols=35 Identities=23% Similarity=0.444 Sum_probs=27.5
Q ss_pred CCCeEEEeCCCCCchhhHH--HhHhhh-cCCeEEEEec
Q 012190 178 GSPTLLFLPGIDGLGLGLI--LHHKPL-GKAFEVRCLH 212 (468)
Q Consensus 178 ~~p~lV~lHG~~~s~~~~~--~~~~~L-~~~~~V~~~D 212 (468)
.+|.+|.+-|+.|++..-. .+.+.| ..+++++.+|
T Consensus 21 ~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LD 58 (197)
T COG0529 21 QKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLD 58 (197)
T ss_pred CCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEec
Confidence 3678999999999988533 344556 8899999999
No 274
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=23.49 E-value=1.8e+02 Score=30.75 Aligned_cols=96 Identities=13% Similarity=0.145 Sum_probs=52.4
Q ss_pred CCeEEEeCCCCCchhhHHHhH--------hhhcCCe-EEEEecC----CCCCCCC------hHHHHHHHHHHHHHHhhcC
Q 012190 179 SPTLLFLPGIDGLGLGLILHH--------KPLGKAF-EVRCLHI----PVYDRTP------FEGLVKFVEETVRREHASS 239 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~~~~~~--------~~L~~~~-~V~~~D~----~G~G~Ss------~~~~~~dl~~~i~~~~~~~ 239 (468)
.-++=+--|++.+......+. .+|.+|- +|..-.- +-+|.-+ -..-++.+...++.....
T Consensus 258 ~ipLTLSiGvg~g~~~~~elg~vA~~~L~lAlgRGGDQVvIke~~~k~~fyGG~s~~~ekrTRvRaRvis~al~d~i~e- 336 (655)
T COG3887 258 NIPLTLSIGVGYGENNLIELGEVAQSNLDLALGRGGDQVVIKENNGKVRFYGGKSNPMEKRTRVRARVISTALSDIIKE- 336 (655)
T ss_pred CcceEEEEEeccCcccHHHHHHHHHHhHHHHhccCCceEEEEcCCCceeeeCCCcchhHHhHHHHHHHHHHHHHHHHhh-
Confidence 345666667666655433322 2334443 3333322 2344332 223344444444444333
Q ss_pred CCCcEEEEEe------ChhHHHHHHHHHhCCCCceEEEEeCCCC
Q 012190 240 PEKPIYLVGD------SFGGCLALAVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 240 ~~~~i~LvGh------S~GG~ia~~~a~~~P~~v~~lVli~p~~ 277 (468)
.++|+++|| ++|+++++..-+..-.+ .+.++++|..
T Consensus 337 -~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~~ 378 (655)
T COG3887 337 -SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPED 378 (655)
T ss_pred -cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECccc
Confidence 558999999 78999998766655444 5677777643
No 275
>COG5023 Tubulin [Cytoskeleton]
Probab=23.38 E-value=1.9e+02 Score=28.66 Aligned_cols=57 Identities=19% Similarity=0.194 Sum_probs=39.0
Q ss_pred hHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHHH--------HHHHhCCCCceEEEEeCCCC
Q 012190 221 FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLAL--------AVAARNPTIDLILILSNPAT 277 (468)
Q Consensus 221 ~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia~--------~~a~~~P~~v~~lVli~p~~ 277 (468)
-.++.+++.+.|+.+......-.=+++=||+||..+. .+..++|+++..-..+-|+.
T Consensus 109 G~e~~ddvmd~IrreAd~cD~LqGF~l~HS~gGGTGSG~GslLLerl~~eypkK~~~tfSV~P~p 173 (443)
T COG5023 109 GKEIIDDVMDMIRREADGCDGLQGFLLLHSLGGGTGSGLGSLLLERLREEYPKKIKLTFSVFPAP 173 (443)
T ss_pred hHHHHHHHHHHHHHHhhcCccccceeeeeeccCcCcccHHHHHHHHHHHhcchhheeEEEeccCC
Confidence 3677888888888776555444556888888765432 44566898887766676654
No 276
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=22.75 E-value=1.2e+02 Score=28.79 Aligned_cols=66 Identities=18% Similarity=0.170 Sum_probs=43.2
Q ss_pred CCeEEEeCCCCCchh--hHHHhHhhh-cCCeEEEEecCCCCCCCChHHHH-HHHHHHHHHHhhcCCCCcEEEEEeChh
Q 012190 179 SPTLLFLPGIDGLGL--GLILHHKPL-GKAFEVRCLHIPVYDRTPFEGLV-KFVEETVRREHASSPEKPIYLVGDSFG 252 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~--~~~~~~~~L-~~~~~V~~~D~~G~G~Ss~~~~~-~dl~~~i~~~~~~~~~~~i~LvGhS~G 252 (468)
.|+||++.|+.+++. .-..++..| .++++|.++..|. -++.. ..+-.+...+ .....|.++=-|+=
T Consensus 55 ~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~Pt-----~eE~~~p~lWRfw~~l---P~~G~i~IF~RSWY 124 (264)
T TIGR03709 55 RSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAPS-----AEELDHDFLWRIHKAL---PERGEIGIFNRSHY 124 (264)
T ss_pred CcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCCC-----HHHHcCchHHHHHHhC---CCCCeEEEEcCccc
Confidence 579999999998877 456788888 7789999996552 22222 2333444442 22446777766663
No 277
>KOG3086 consensus Predicted dioxygenase [General function prediction only]
Probab=22.71 E-value=2e+02 Score=26.70 Aligned_cols=60 Identities=13% Similarity=0.133 Sum_probs=44.0
Q ss_pred ChHHHHHHHHHHHHHHhhcCCCCcEEE---EEeChhHHH-HHHHHHhCCCCceEEEEeCCCCCC
Q 012190 220 PFEGLVKFVEETVRREHASSPEKPIYL---VGDSFGGCL-ALAVAARNPTIDLILILSNPATSF 279 (468)
Q Consensus 220 s~~~~~~dl~~~i~~~~~~~~~~~i~L---vGhS~GG~i-a~~~a~~~P~~v~~lVli~p~~~~ 279 (468)
+-.++.+++..++.+.....+..++++ .|+++-|.. |..++.-.|..++++.+++|...+
T Consensus 18 ~~~~Ls~QL~~wL~~~~~~~~paRaiIaPHAGY~YcG~~Aa~ay~qvdps~v~RIFILGPSHHv 81 (296)
T KOG3086|consen 18 SGPQLSAQLEGWLSQVTLTKGPARAIIAPHAGYTYCGSCAAYAYKQVDPSNVQRIFILGPSHHV 81 (296)
T ss_pred CHHHHHHHHHHHHhccCCCCCCceEEEcCCCCcccchHHHHHHHhhcChhHeeEEEEecCccee
Confidence 467888999999988765544445555 578885554 556667778899999999997644
No 278
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=21.68 E-value=1.1e+02 Score=29.01 Aligned_cols=21 Identities=19% Similarity=0.072 Sum_probs=18.0
Q ss_pred cEEEEEeChhHHHHHHHHHhC
Q 012190 243 PIYLVGDSFGGCLALAVAARN 263 (468)
Q Consensus 243 ~i~LvGhS~GG~ia~~~a~~~ 263 (468)
.=.+.|-|+|+.++..+|...
T Consensus 39 ~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 39 IDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred ccEEEEECHHHHHHHHHHcCC
Confidence 337899999999999999864
No 279
>PRK02910 light-independent protochlorophyllide reductase subunit B; Provisional
Probab=21.62 E-value=2.9e+02 Score=29.01 Aligned_cols=60 Identities=18% Similarity=0.083 Sum_probs=40.2
Q ss_pred hHHHhHhhhcCCeEEEEecCCCCCCCChHHHHHHHHHHHHHHhh--------cCCCCcEEEEEeChhH
Q 012190 194 GLILHHKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRREHA--------SSPEKPIYLVGDSFGG 253 (468)
Q Consensus 194 ~~~~~~~~L~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~~~--------~~~~~~i~LvGhS~GG 253 (468)
....+++.+..+..|+.++.+|+..+....+...+..+++++.. ......|.|+|.+..|
T Consensus 103 Di~~v~~~~~~~~~Vi~v~t~gf~~~~~~G~~~al~~lv~~~~~~~~~~~~~~~~~~~VNIiG~~~l~ 170 (519)
T PRK02910 103 DLGGLAKHAGLPIPVLPLELNAYRVKENWAADETFYQLVRALAKKAAELPQPKTARPSVNLLGPTALG 170 (519)
T ss_pred CHHHHHHHhCCCCCEEEEecCCcccccchHHHHHHHHHHHHHhhhcccccccCCCCCeEEEEecCccC
Confidence 44555666655778999999999887665565666666665432 1123469999987554
No 280
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=21.37 E-value=7.5e+02 Score=23.91 Aligned_cols=86 Identities=20% Similarity=0.162 Sum_probs=51.1
Q ss_pred eEEEeCCCCCchhhHHHhHhhhcCCeEEEEecCCC---------------CCCC-----------------ChHHHHHHH
Q 012190 181 TLLFLPGIDGLGLGLILHHKPLGKAFEVRCLHIPV---------------YDRT-----------------PFEGLVKFV 228 (468)
Q Consensus 181 ~lV~lHG~~~s~~~~~~~~~~L~~~~~V~~~D~~G---------------~G~S-----------------s~~~~~~dl 228 (468)
.+|.--|.+|+...-...++.-....++++.|.-| -|.+ +-++-....
T Consensus 172 ~fVagvGTGGTitGvar~Lk~~~p~i~iv~vdP~~S~~~~~G~g~~~i~GIG~~~ip~~~~~~~iD~v~~V~d~~A~~~~ 251 (300)
T COG0031 172 AFVAGVGTGGTITGVARYLKERNPNVRIVAVDPEGSVLLSGGEGPHKIEGIGAGFVPENLDLDLIDEVIRVSDEEAIATA 251 (300)
T ss_pred EEEEeCCcchhHHHHHHHHHhhCCCcEEEEECCCCCcccCCCCCCcccCCCCCCcCCcccccccCceEEEECHHHHHHHH
Confidence 56676777777777666666666668899988653 2222 123333334
Q ss_pred HHHHHHHhhcCCCCcEEEEEeChhHHHH--HHHHHhCCCCceEEEEeCC
Q 012190 229 EETVRREHASSPEKPIYLVGDSFGGCLA--LAVAARNPTIDLILILSNP 275 (468)
Q Consensus 229 ~~~i~~~~~~~~~~~i~LvGhS~GG~ia--~~~a~~~P~~v~~lVli~p 275 (468)
..+.+. .+ +++|-|-|+.++ +.+|.+.+. -+.+|.+-|
T Consensus 252 r~La~~----eG----ilvG~SsGA~~~aa~~~a~~~~~-g~~IVti~p 291 (300)
T COG0031 252 RRLARE----EG----LLVGISSGAALAAALKLAKELPA-GKTIVTILP 291 (300)
T ss_pred HHHHHH----hC----eeecccHHHHHHHHHHHHHhcCC-CCeEEEEEC
Confidence 444443 22 699999998874 456666653 233444444
No 281
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=21.25 E-value=2.9e+02 Score=25.54 Aligned_cols=36 Identities=17% Similarity=0.075 Sum_probs=22.2
Q ss_pred CCeEEEeCCCCCc--hhhHHH-hHhhh-cCCeEEEEecCC
Q 012190 179 SPTLLFLPGIDGL--GLGLIL-HHKPL-GKAFEVRCLHIP 214 (468)
Q Consensus 179 ~p~lV~lHG~~~s--~~~~~~-~~~~L-~~~~~V~~~D~~ 214 (468)
+|.|+|++-.... ...|.. ..+.+ ..++.+..++.+
T Consensus 31 ~~~v~fIPtAs~~~~~~~y~~~~~~af~~lG~~v~~l~~~ 70 (233)
T PRK05282 31 RRKAVFIPYAGVTQSWDDYTAKVAEALAPLGIEVTGIHRV 70 (233)
T ss_pred CCeEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEeccc
Confidence 4579999987743 444333 44444 446777777765
No 282
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=21.12 E-value=82 Score=32.48 Aligned_cols=60 Identities=15% Similarity=0.016 Sum_probs=38.4
Q ss_pred CceEEEEEeCCCCCCCcHHHHHHHHHhCC------CcEEEEeCCCCccccccCcHHHHHHHHhcCcc
Q 012190 379 KAEVLVLASGKDNMLPSEDEAKRLNNSLQ------NCIVRNFKDNGHTLLLEEGISLLTIIKGTCKY 439 (468)
Q Consensus 379 ~~PvLlI~G~~D~~v~~~~~~~~l~~~l~------~~~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~ 439 (468)
+.+++..+|=.|..+++. ....-.+.++ +.....+-.+||++.+++|+...+.+..|.+.
T Consensus 425 ~Lkw~~~~g~~d~~~~~~-~~~~t~e~~~~~~s~~n~~~~r~y~aGHMvp~d~P~~~~~~~~~~~~~ 490 (498)
T COG2939 425 KLKWLGASGYFDASTPFF-WSRLTLEEMGGYKSYRNLTFLRIYEAGHMVPYDRPESSLEMVNLWING 490 (498)
T ss_pred cceEeeecchhhhcCCCc-ccccchhhcccccccCCceEEEEecCcceeecCChHHHHHHHHHHHhh
Confidence 456666666677766665 2322222222 23333344489999999999999999987554
No 283
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=20.84 E-value=1.5e+02 Score=25.77 Aligned_cols=21 Identities=24% Similarity=0.235 Sum_probs=18.4
Q ss_pred cEEEEEeChhHHHHHHHHHhC
Q 012190 243 PIYLVGDSFGGCLALAVAARN 263 (468)
Q Consensus 243 ~i~LvGhS~GG~ia~~~a~~~ 263 (468)
.-.+.|-|.|+.+|..++...
T Consensus 27 ~d~v~GtSaGAi~aa~~a~g~ 47 (172)
T cd07198 27 IDIIAGTSAGAIVAALLASGR 47 (172)
T ss_pred CCEEEEECHHHHHHHHHHcCC
Confidence 557999999999999998865
No 284
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=20.83 E-value=76 Score=33.54 Aligned_cols=43 Identities=9% Similarity=0.112 Sum_probs=30.8
Q ss_pred CceEEEEEeCCCCCCCcHHHHHHHHHhC-------CCcEEEEeCCCCccc
Q 012190 379 KAEVLVLASGKDNMLPSEDEAKRLNNSL-------QNCIVRNFKDNGHTL 421 (468)
Q Consensus 379 ~~PvLlI~G~~D~~v~~~~~~~~l~~~l-------~~~~~~~i~~aGH~~ 421 (468)
..|.+++||..|.++|..-.++-+..+. ...+++.+.++-|+=
T Consensus 555 GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHfD 604 (690)
T PF10605_consen 555 GKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHFD 604 (690)
T ss_pred CCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeech
Confidence 6899999999999999872233333322 135778888988874
No 285
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.81 E-value=1.5e+02 Score=28.64 Aligned_cols=42 Identities=12% Similarity=0.036 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcEEEEEeC--hhHHHHHHHHHhC
Q 012190 222 EGLVKFVEETVRREHASSPEKPIYLVGDS--FGGCLALAVAARN 263 (468)
Q Consensus 222 ~~~~~dl~~~i~~~~~~~~~~~i~LvGhS--~GG~ia~~~a~~~ 263 (468)
.-.+..+.+++++.+....++++.++|.| ||..+|..+..+.
T Consensus 140 PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~g 183 (301)
T PRK14194 140 PCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAH 183 (301)
T ss_pred CCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCC
Confidence 44567788888888777789999999997 8999998887653
No 286
>PF03976 PPK2: Polyphosphate kinase 2 (PPK2); InterPro: IPR022488 This presumed domain is found in one or two copies per protein. The domain is about 230 amino acids in length and has many conserved motifs, it has polyphosphate kinase activity [, ].; PDB: 3CZP_A 3RHF_D 3CZQ_B.
Probab=20.77 E-value=75 Score=29.35 Aligned_cols=36 Identities=28% Similarity=0.451 Sum_probs=28.0
Q ss_pred CCeEEEeCCCCCchhh--HHHhHhhh-cCCeEEEEecCC
Q 012190 179 SPTLLFLPGIDGLGLG--LILHHKPL-GKAFEVRCLHIP 214 (468)
Q Consensus 179 ~p~lV~lHG~~~s~~~--~~~~~~~L-~~~~~V~~~D~~ 214 (468)
.|+||++.|+.+++.+ -..+...| .++++|.++.-|
T Consensus 30 ~~vlIl~eG~d~sGKg~~I~~l~~~lDPR~~~v~~~~~p 68 (228)
T PF03976_consen 30 IPVLILFEGWDASGKGGTINRLIEWLDPRGFRVHAFGKP 68 (228)
T ss_dssp HEEEEEEEESTTSSHHHHHHHHHCCS-GGGEEEEE-SS-
T ss_pred CcEEEEEeccccCCchHHHHHHHHhCCCCeeEEEeCCCC
Confidence 5589999999999874 45677777 778999999876
No 287
>KOG0341 consensus DEAD-box protein abstrakt [RNA processing and modification]
Probab=20.76 E-value=1.7e+02 Score=29.14 Aligned_cols=78 Identities=15% Similarity=0.190 Sum_probs=53.6
Q ss_pred ceEEEEEeCCCCCCCcHHHHHHHHHhCCCc--------EEEEeCCCCccccccCcHHHHHHHHhcCcccccCCCCCCCCC
Q 012190 380 AEVLVLASGKDNMLPSEDEAKRLNNSLQNC--------IVRNFKDNGHTLLLEEGISLLTIIKGTCKYRRSRKLDSVADF 451 (468)
Q Consensus 380 ~PvLlI~G~~D~~v~~~~~~~~l~~~l~~~--------~~~~i~~aGH~~~~e~p~~~~~~I~~~~F~~r~~~~~~v~~~ 451 (468)
+....|||++|+--... ..+.+...-+++ +-.-||+--|.+.++-|+++.+.+-+..-.-|+-+.-..+.|
T Consensus 446 VEavaIHGGKDQedR~~-ai~afr~gkKDVLVATDVASKGLDFp~iqHVINyDMP~eIENYVHRIGRTGRsg~~GiATTf 524 (610)
T KOG0341|consen 446 VEAVAIHGGKDQEDRHY-AIEAFRAGKKDVLVATDVASKGLDFPDIQHVINYDMPEEIENYVHRIGRTGRSGKTGIATTF 524 (610)
T ss_pred ceeEEeecCcchhHHHH-HHHHHhcCCCceEEEecchhccCCCccchhhccCCChHHHHHHHHHhcccCCCCCcceeeee
Confidence 55667888888764443 223332221221 122368888999999999999999988888888777888888
Q ss_pred CCCCHHH
Q 012190 452 LPPSRQE 458 (468)
Q Consensus 452 ~~~~~~~ 458 (468)
|-.+-+|
T Consensus 525 INK~~~e 531 (610)
T KOG0341|consen 525 INKNQEE 531 (610)
T ss_pred ecccchH
Confidence 8766554
No 288
>PRK11613 folP dihydropteroate synthase; Provisional
Probab=20.63 E-value=5e+02 Score=24.83 Aligned_cols=49 Identities=14% Similarity=0.072 Sum_probs=23.1
Q ss_pred cCCeE--EEEecCCCCCCCC-hHHHHHHHHHHHHHHhhcCCCCcEEEEEeChhHHHH
Q 012190 203 GKAFE--VRCLHIPVYDRTP-FEGLVKFVEETVRREHASSPEKPIYLVGDSFGGCLA 256 (468)
Q Consensus 203 ~~~~~--V~~~D~~G~G~Ss-~~~~~~dl~~~i~~~~~~~~~~~i~LvGhS~GG~ia 256 (468)
..|.. =+.+|. |.|.+. .++-.+ +..-++.++. + +.| +++|+|-=.++.
T Consensus 174 ~~GI~~~~IilDP-GiGF~k~~~~n~~-ll~~l~~l~~-l-g~P-ilvg~SRKsfig 225 (282)
T PRK11613 174 AAGIAKEKLLLDP-GFGFGKNLSHNYQ-LLARLAEFHH-F-NLP-LLVGMSRKSMIG 225 (282)
T ss_pred HcCCChhhEEEeC-CCCcCCCHHHHHH-HHHHHHHHHh-C-CCC-EEEEecccHHHH
Confidence 45553 567774 555442 222222 2222333321 1 234 489999554443
No 289
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport. Some of them function as molecular chaperones, subunits of proteolytic complexes or independent proteases (FtsH, Lon). They also act as DNA helicases and transcription factors []. AAA ATPases belong to the AAA+ superfamily of ringshaped P-loop NTPases, which act via the energy-dependent unfolding of macromolecules [, ]. There are six major clades of AAA domains (proteasome subunits, metalloproteases, domains D1 and D2 of ATPases with two AAA domains, the MSP1/katanin/spastin group and BCS1 and it homologues), as well as a number of deeply branching minor clades []. They assemble into oligomeric assemblies (often hexamers) that form a ring-shaped structure with a central pore. These proteins produce a molecular motor that couples ATP binding and hydrolysis to changes in conformational states that act upon a target substrate, either translocating or remodelling it []. They are found in all living organisms and share the common feature of the presence of a highly conserved AAA domain called the AAA module. This domain is responsible for ATP binding and hydrolysis. It contains 200-250 residues, among them there are two classical motifs, Walker A (GX4GKT) and Walker B (HyDE) []. The functional variety seen between AAA ATPases is in part due to their extensive number of accessory domains and factors, and to their variable organisation within oligomeric assemblies, in addition to changes in key functional residues within the ATPase domain itself. More information about these proteins can be found at Protein of the Month: AAA ATPases [].; GO: 0005524 ATP binding; PDB: 3H4M_A 1NSF_A 1D2N_A 1HQY_E 1DO0_E 1DO2_C 1G4B_E 1HT1_F 1G4A_F 1HT2_G ....
Probab=20.27 E-value=2.6e+02 Score=22.19 Aligned_cols=51 Identities=12% Similarity=0.092 Sum_probs=31.5
Q ss_pred EEeCCCCCchhhHH--HhHhhhcCCeEEEEecCCCCCCCChHHHHHHHHHHHHHH
Q 012190 183 LFLPGIDGLGLGLI--LHHKPLGKAFEVRCLHIPVYDRTPFEGLVKFVEETVRRE 235 (468)
Q Consensus 183 V~lHG~~~s~~~~~--~~~~~L~~~~~V~~~D~~G~G~Ss~~~~~~dl~~~i~~~ 235 (468)
|++||-.|++.... .+++.+ ++.++-+|..-.......+..+.+..++++.
T Consensus 1 ill~G~~G~GKT~l~~~la~~l--~~~~~~i~~~~~~~~~~~~~~~~i~~~~~~~ 53 (132)
T PF00004_consen 1 ILLHGPPGTGKTTLARALAQYL--GFPFIEIDGSELISSYAGDSEQKIRDFFKKA 53 (132)
T ss_dssp EEEESSTTSSHHHHHHHHHHHT--TSEEEEEETTHHHTSSTTHHHHHHHHHHHHH
T ss_pred CEEECcCCCCeeHHHHHHHhhc--ccccccccccccccccccccccccccccccc
Confidence 68899988887442 234444 4677777766555444555556666666653
No 290
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=20.08 E-value=2e+02 Score=24.87 Aligned_cols=41 Identities=20% Similarity=0.141 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHhhcCCCCcEEEEEeC--hhHHHHHHHHHh
Q 012190 222 EGLVKFVEETVRREHASSPEKPIYLVGDS--FGGCLALAVAAR 262 (468)
Q Consensus 222 ~~~~~dl~~~i~~~~~~~~~~~i~LvGhS--~GG~ia~~~a~~ 262 (468)
.-.+..+.+++++......++++.++|.| .|-.+++.+..+
T Consensus 17 PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~ 59 (160)
T PF02882_consen 17 PCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNK 59 (160)
T ss_dssp -HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhC
Confidence 45677888888887777788999999999 488887777665
No 291
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=20.07 E-value=1.2e+02 Score=28.71 Aligned_cols=21 Identities=38% Similarity=0.510 Sum_probs=16.9
Q ss_pred CCcEEEEEeChhHHHHHHHHH
Q 012190 241 EKPIYLVGDSFGGCLALAVAA 261 (468)
Q Consensus 241 ~~~i~LvGhS~GG~ia~~~a~ 261 (468)
..|-.++|||+|=..|+.++.
T Consensus 82 i~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 82 LKPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred CCCCEEeecCHHHHHHHHHhC
Confidence 568899999999987776653
Done!