Query         012191
Match_columns 468
No_of_seqs    533 out of 2385
Neff          7.1 
Searched_HMMs 46136
Date          Fri Mar 29 00:01:03 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012191.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012191hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0600 Cdc2-related protein k 100.0 1.6E-51 3.6E-56  419.8  19.9  216    1-216   224-439 (560)
  2 KOG0663 Protein kinase PITSLRE 100.0 1.7E-41 3.8E-46  331.8  12.5  198    1-200   183-384 (419)
  3 KOG0659 Cdk activating kinase  100.0 3.3E-40 7.2E-45  314.6  12.4  194    1-197   107-301 (318)
  4 KOG0660 Mitogen-activated prot 100.0 2.9E-39 6.2E-44  319.7  10.2  188    1-188   131-321 (359)
  5 KOG0661 MAPK related serine/th 100.0 4.6E-39   1E-43  326.7  11.0  181    1-183   116-297 (538)
  6 KOG0593 Predicted protein kina 100.0 2.3E-38   5E-43  306.5  11.1  181    1-182   107-289 (396)
  7 KOG0594 Protein kinase PCTAIRE 100.0 1.4E-37 3.1E-42  307.9  13.2  185    1-186   126-311 (323)
  8 KOG0658 Glycogen synthase kina 100.0 2.3E-36 5.1E-41  299.6  12.0  182    1-184   131-313 (364)
  9 KOG0615 Serine/threonine prote 100.0 3.3E-36   7E-41  301.6   8.4  158    1-185   282-445 (475)
 10 KOG0033 Ca2+/calmodulin-depend 100.0 8.8E-35 1.9E-39  274.7   8.9  180    1-213   116-298 (355)
 11 KOG0575 Polo-like serine/threo 100.0 4.4E-34 9.6E-39  298.2  12.6  152    1-183   124-275 (592)
 12 KOG0666 Cyclin C-dependent kin 100.0 3.6E-34 7.8E-39  278.1   8.5  186    1-186   138-346 (438)
 13 KOG0599 Phosphorylase kinase g 100.0 5.7E-34 1.2E-38  272.6   7.1  157    1-184   129-290 (411)
 14 KOG0592 3-phosphoinositide-dep 100.0 3.4E-33 7.3E-38  287.8  12.2  156    2-187   181-348 (604)
 15 KOG0669 Cyclin T-dependent kin 100.0 2.6E-33 5.7E-38  265.6  10.0  185    1-186   130-324 (376)
 16 KOG0667 Dual-specificity tyros 100.0 6.9E-33 1.5E-37  291.7  14.2  181    2-187   296-512 (586)
 17 KOG0662 Cyclin-dependent kinas 100.0 9.2E-33   2E-37  250.8   9.8  180    1-182   107-288 (292)
 18 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2.6E-32 5.6E-37  270.5  12.1  178    1-180   109-288 (288)
 19 KOG0581 Mitogen-activated prot 100.0 3.1E-32 6.7E-37  270.8  11.2  152    2-184   185-342 (364)
 20 cd07862 STKc_CDK6 Catalytic do 100.0 1.3E-31 2.8E-36  264.4  13.1  175    1-180   116-290 (290)
 21 KOG0583 Serine/threonine prote 100.0 1.4E-31   3E-36  275.9  13.6  152    1-182   126-280 (370)
 22 PTZ00036 glycogen synthase kin 100.0 9.5E-32 2.1E-36  283.7  11.9  181    2-185   177-359 (440)
 23 KOG0588 Serine/threonine prote 100.0 1.4E-31 3.1E-36  280.8  12.1  155    1-186   118-272 (786)
 24 cd07845 STKc_CDK10 Catalytic d 100.0 3.7E-31 7.9E-36  264.3  14.2  195    1-196   114-309 (309)
 25 cd07848 STKc_CDKL5 Catalytic d 100.0 4.8E-31   1E-35  259.9  13.7  179    1-180   106-287 (287)
 26 KOG0598 Ribosomal protein S6 k 100.0 1.7E-31 3.6E-36  265.4  10.1  155    2-186   132-290 (357)
 27 cd07868 STKc_CDK8 Catalytic do 100.0 3.9E-31 8.4E-36  264.8  12.7  180    1-180   114-317 (317)
 28 cd07863 STKc_CDK4 Catalytic do 100.0   8E-31 1.7E-35  258.2  13.7  175    1-180   114-288 (288)
 29 cd07869 STKc_PFTAIRE1 Catalyti 100.0 5.8E-31 1.3E-35  262.4  12.5  183    1-184   109-295 (303)
 30 cd07875 STKc_JNK1 Catalytic do 100.0   7E-31 1.5E-35  269.1  13.1  183    1-186   132-327 (364)
 31 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.3E-30 2.8E-35  264.6  14.2  179    1-183   124-304 (343)
 32 cd07859 STKc_TDY_MAPK_plant Ca 100.0 6.8E-31 1.5E-35  264.8  11.8  185    1-185   109-298 (338)
 33 cd07853 STKc_NLK Catalytic dom 100.0 7.4E-31 1.6E-35  269.9  11.1  185    1-185   109-296 (372)
 34 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.2E-30 2.7E-35  260.8  12.1  183    1-184   110-293 (309)
 35 KOG0578 p21-activated serine/t 100.0   1E-30 2.2E-35  271.2  11.5  153    2-182   376-528 (550)
 36 KOG0605 NDR and related serine 100.0 1.3E-30 2.7E-35  268.8  11.3  169    2-197   248-465 (550)
 37 PHA03212 serine/threonine kina 100.0 1.1E-30 2.3E-35  271.7  10.8  185    1-186   188-385 (391)
 38 PTZ00284 protein kinase; Provi 100.0 1.1E-30 2.4E-35  277.1  10.7  182    1-187   237-448 (467)
 39 KOG0198 MEKK and related serin 100.0 1.8E-30   4E-35  260.0  11.5  155    2-183   124-282 (313)
 40 KOG0665 Jun-N-terminal kinase  100.0   1E-30 2.2E-35  255.1   8.5  180    1-183   124-316 (369)
 41 cd07876 STKc_JNK2 Catalytic do 100.0 2.6E-30 5.7E-35  264.4  11.8  181    1-184   129-322 (359)
 42 KOG0671 LAMMER dual specificit 100.0 3.8E-30 8.1E-35  256.2  11.2  177    2-183   199-412 (415)
 43 cd07874 STKc_JNK3 Catalytic do 100.0 4.3E-30 9.2E-35  262.2  11.9  181    1-184   125-318 (355)
 44 cd07867 STKc_CDC2L6 Catalytic  100.0 3.8E-30 8.2E-35  257.1  11.3  180    1-180   114-317 (317)
 45 KOG0664 Nemo-like MAPK-related 100.0   2E-30 4.4E-35  248.2   6.9  184    1-185   162-351 (449)
 46 cd07839 STKc_CDK5 Catalytic do 100.0 1.1E-29 2.4E-34  249.6  12.4  179    1-180   105-284 (284)
 47 KOG0604 MAP kinase-activated p 100.0 8.3E-30 1.8E-34  246.8  10.5  157    1-185   167-330 (400)
 48 cd07861 STKc_CDK1_euk Catalyti 100.0 9.5E-30 2.1E-34  249.9  11.1  177    1-180   107-285 (285)
 49 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.5E-29 3.2E-34  251.8  12.5  180    2-182   111-291 (301)
 50 cd05571 STKc_PKB Catalytic dom 100.0 1.4E-29   3E-34  255.6  12.5  153    2-185   102-259 (323)
 51 KOG0616 cAMP-dependent protein 100.0   5E-30 1.1E-34  248.2   8.2  151    2-186   151-306 (355)
 52 cd05614 STKc_MSK2_N N-terminal 100.0 1.3E-29 2.8E-34  256.2  11.5  160    1-185   111-275 (332)
 53 cd07832 STKc_CCRK Catalytic do 100.0 3.1E-29 6.7E-34  246.0  12.8  181    1-181   105-286 (286)
 54 cd05631 STKc_GRK4 Catalytic do 100.0 1.6E-29 3.5E-34  250.1  10.9  156    2-185   109-269 (285)
 55 cd05601 STKc_CRIK Catalytic do 100.0 3.5E-29 7.5E-34  252.8  12.1  160    1-186   108-272 (330)
 56 KOG0032 Ca2+/calmodulin-depend 100.0 3.6E-29 7.9E-34  258.5  12.3  159    1-187   141-303 (382)
 57 cd05585 STKc_YPK1_like Catalyt 100.0 6.8E-29 1.5E-33  249.2  12.8  152    1-183    99-253 (312)
 58 KOG0585 Ca2+/calmodulin-depend 100.0 1.6E-29 3.6E-34  257.0   8.3  156    1-183   216-378 (576)
 59 cd07831 STKc_MOK Catalytic dom 100.0 9.2E-29   2E-33  242.2  13.4  177    1-180   106-282 (282)
 60 cd05573 STKc_ROCK_NDR_like Cat 100.0 7.3E-29 1.6E-33  251.8  12.9  159    1-186   107-294 (350)
 61 cd05586 STKc_Sck1_like Catalyt 100.0 5.3E-29 1.1E-33  251.7  11.8  155    1-184   102-260 (330)
 62 cd07866 STKc_BUR1 Catalytic do 100.0 1.2E-28 2.7E-33  244.7  13.2  180    1-180   121-311 (311)
 63 KOG0582 Ste20-like serine/thre 100.0 6.3E-29 1.4E-33  251.4  10.8  164    1-183   132-299 (516)
 64 PTZ00263 protein kinase A cata 100.0 8.4E-29 1.8E-33  250.7  11.9  150    2-185   125-279 (329)
 65 cd05596 STKc_ROCK Catalytic do 100.0 1.2E-28 2.7E-33  253.9  13.3  160    2-186   149-313 (370)
 66 cd07841 STKc_CDK7 Catalytic do 100.0 1.7E-28 3.7E-33  243.1  13.7  185    1-188   108-293 (298)
 67 cd05612 STKc_PRKX_like Catalyt 100.0 6.8E-29 1.5E-33  246.6  10.8  151    1-185   107-262 (291)
 68 KOG0694 Serine/threonine prote 100.0 5.5E-29 1.2E-33  262.9  10.3  153    3-186   476-633 (694)
 69 cd07850 STKc_JNK Catalytic dom 100.0 1.4E-28   3E-33  251.1  13.0  183    1-186   124-320 (353)
 70 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.5E-28 3.2E-33  248.8  13.0  159    1-185   107-265 (333)
 71 cd05590 STKc_nPKC_eta Catalyti 100.0   1E-28 2.2E-33  249.1  11.6  154    1-185   102-261 (320)
 72 PHA03207 serine/threonine kina 100.0   1E-28 2.2E-33  256.4  11.7  183    1-186   191-384 (392)
 73 cd05593 STKc_PKB_gamma Catalyt 100.0 1.3E-28 2.9E-33  249.3  12.2  154    1-185   101-259 (328)
 74 cd05591 STKc_nPKC_epsilon Cata 100.0 1.5E-28 3.4E-33  247.6  12.5  154    1-185   102-262 (321)
 75 KOG0591 NIMA (never in mitosis 100.0 4.9E-29 1.1E-33  239.8   8.1  142    1-171   130-275 (375)
 76 cd07840 STKc_CDK9_like Catalyt 100.0 1.4E-28   3E-33  240.9  11.5  180    1-180   106-287 (287)
 77 PTZ00426 cAMP-dependent protei 100.0 1.3E-28 2.8E-33  251.1  11.6  152    1-186   137-293 (340)
 78 cd07843 STKc_CDC2L1 Catalytic  100.0 2.2E-28 4.9E-33  241.9  12.7  179    1-180   112-293 (293)
 79 PTZ00024 cyclin-dependent prot 100.0 2.7E-28 5.8E-33  246.6  13.5  191    1-193   125-329 (335)
 80 cd07860 STKc_CDK2_3 Catalytic  100.0 1.6E-28 3.4E-33  241.4  11.0  178    1-180   106-284 (284)
 81 cd05594 STKc_PKB_alpha Catalyt 100.0 1.9E-28 4.1E-33  247.3  11.9  153    2-185   102-260 (325)
 82 cd05621 STKc_ROCK2 Catalytic d 100.0 4.1E-28 8.8E-33  250.3  14.5  159    2-185   149-312 (370)
 83 cd05620 STKc_nPKC_delta Cataly 100.0 1.8E-28 3.9E-33  246.9  11.3  153    2-185   103-256 (316)
 84 cd05584 STKc_p70S6K Catalytic  100.0 2.9E-28 6.3E-33  245.9  12.7  154    1-185   106-264 (323)
 85 cd05592 STKc_nPKC_theta_delta  100.0 2.2E-28 4.7E-33  246.3  11.6  154    1-185   102-256 (316)
 86 cd05575 STKc_SGK Catalytic dom 100.0 2.3E-28   5E-33  246.5  11.8  154    1-185   102-259 (323)
 87 cd05599 STKc_NDR_like Catalyti 100.0 2.7E-28 5.9E-33  249.6  12.3  158    1-185   107-304 (364)
 88 KOG4717 Serine/threonine prote 100.0 8.2E-29 1.8E-33  253.3   8.3  152    1-183   124-276 (864)
 89 cd07849 STKc_ERK1_2_like Catal 100.0 4.2E-28 9.2E-33  245.7  12.6  185    1-185   112-300 (336)
 90 cd05616 STKc_cPKC_beta Catalyt 100.0 3.2E-28 6.8E-33  245.5  11.6  154    1-185   107-265 (323)
 91 cd05587 STKc_cPKC Catalytic do 100.0 2.7E-28 5.9E-33  246.1  11.1  154    1-185   107-265 (324)
 92 cd07864 STKc_CDK12 Catalytic d 100.0 5.8E-28 1.3E-32  239.5  13.2  180    1-180   122-302 (302)
 93 cd05589 STKc_PKN Catalytic dom 100.0 3.7E-28   8E-33  245.1  12.0  154    1-185   107-265 (324)
 94 cd05608 STKc_GRK1 Catalytic do 100.0   3E-28 6.4E-33  240.4  11.1  159    1-186   103-266 (280)
 95 cd05595 STKc_PKB_beta Catalyti 100.0   2E-28 4.4E-33  247.3  10.1  154    1-185   101-259 (323)
 96 cd07837 STKc_CdkB_plant Cataly  99.9 6.2E-28 1.3E-32  238.4  12.9  178    1-181   116-295 (295)
 97 cd07879 STKc_p38delta_MAPK13 C  99.9 6.4E-28 1.4E-32  245.3  13.3  181    1-185   123-305 (342)
 98 cd05628 STKc_NDR1 Catalytic do  99.9 3.8E-28 8.3E-33  249.1  11.7  159    1-186   107-302 (363)
 99 cd07851 STKc_p38 Catalytic dom  99.9 7.2E-28 1.6E-32  245.1  13.3  183    1-187   124-308 (343)
100 PHA03210 serine/threonine kina  99.9 2.3E-28   5E-33  262.0  10.1  180    1-184   273-461 (501)
101 cd07865 STKc_CDK9 Catalytic do  99.9 6.9E-28 1.5E-32  239.2  12.8  180    1-180   125-310 (310)
102 cd05625 STKc_LATS1 Catalytic d  99.9 6.3E-28 1.4E-32  249.0  13.0  158    1-185   107-313 (382)
103 KOG0670 U4/U6-associated splic  99.9 2.5E-28 5.5E-33  250.1   9.4  177    2-182   543-751 (752)
104 cd07844 STKc_PCTAIRE_like Cata  99.9 8.1E-28 1.8E-32  237.4  12.8  179    1-180   109-291 (291)
105 cd07847 STKc_CDKL1_4 Catalytic  99.9 1.2E-27 2.7E-32  234.7  13.9  178    1-180   106-286 (286)
106 cd07855 STKc_ERK5 Catalytic do  99.9 5.1E-28 1.1E-32  244.9  11.5  186    1-186   113-303 (334)
107 cd05622 STKc_ROCK1 Catalytic d  99.9 1.1E-27 2.3E-32  247.2  13.9  160    2-186   149-313 (371)
108 cd07829 STKc_CDK_like Catalyti  99.9 1.5E-27 3.3E-32  233.3  14.3  177    1-180   104-282 (282)
109 cd05602 STKc_SGK1 Catalytic do  99.9 5.8E-28 1.3E-32  243.8  11.6  154    1-185   102-259 (325)
110 cd07835 STKc_CDK1_like Catalyt  99.9 7.8E-28 1.7E-32  236.3  12.0  178    1-180   105-283 (283)
111 cd05626 STKc_LATS2 Catalytic d  99.9 1.1E-27 2.4E-32  247.5  13.6  159    1-185   107-313 (381)
112 cd05598 STKc_LATS Catalytic do  99.9 7.8E-28 1.7E-32  247.6  12.2  158    1-185   107-309 (376)
113 PLN00034 mitogen-activated pro  99.9 7.8E-28 1.7E-32  245.8  12.0  159    1-185   174-336 (353)
114 PLN00009 cyclin-dependent kina  99.9 1.1E-27 2.5E-32  237.0  12.5  181    2-184   109-291 (294)
115 KOG0597 Serine-threonine prote  99.9 2.5E-28 5.5E-33  252.2   8.1  153    2-185   107-259 (808)
116 cd05582 STKc_RSK_N N-terminal   99.9 7.5E-28 1.6E-32  242.0  11.4  153    1-184   104-261 (318)
117 cd07836 STKc_Pho85 Catalytic d  99.9   9E-28   2E-32  235.7  11.7  177    1-180   106-284 (284)
118 cd07834 STKc_MAPK Catalytic do  99.9 8.1E-28 1.8E-32  242.1  11.5  184    1-184   109-296 (330)
119 cd05604 STKc_SGK3 Catalytic do  99.9 7.1E-28 1.5E-32  243.1  11.1  154    1-185   102-259 (325)
120 cd05118 STKc_CMGC Catalytic do  99.9 9.9E-28 2.2E-32  234.7  11.7  179    1-180   104-283 (283)
121 KOG0603 Ribosomal protein S6 k  99.9 4.5E-28 9.7E-33  254.6   9.7  150    1-185   421-571 (612)
122 cd05629 STKc_NDR_like_fungal C  99.9 1.3E-27 2.9E-32  246.1  13.1  158    1-185   107-313 (377)
123 cd07858 STKc_TEY_MAPK_plant Ca  99.9 1.1E-27 2.4E-32  243.0  12.2  186    1-187   114-301 (337)
124 cd05627 STKc_NDR2 Catalytic do  99.9 9.4E-28   2E-32  245.8  11.7  159    1-186   107-302 (360)
125 cd05570 STKc_PKC Catalytic dom  99.9   7E-28 1.5E-32  242.7  10.6  154    1-185   102-260 (318)
126 KOG0986 G protein-coupled rece  99.9   6E-28 1.3E-32  244.4   9.7  182    2-211   294-483 (591)
127 cd05619 STKc_nPKC_theta Cataly  99.9 9.1E-28   2E-32  241.9  11.1  154    1-185   102-256 (316)
128 PHA03209 serine/threonine kina  99.9 5.6E-28 1.2E-32  247.7   9.6  179    1-182   163-356 (357)
129 cd05597 STKc_DMPK_like Catalyt  99.9 1.8E-27   4E-32  241.1  13.2  162    1-186   108-275 (331)
130 cd05623 STKc_MRCK_alpha Cataly  99.9 1.9E-27 4.1E-32  240.9  13.0  161    1-185   108-274 (332)
131 cd05618 STKc_aPKC_iota Catalyt  99.9 1.8E-27 3.8E-32  241.2  12.7  153    2-185   103-270 (329)
132 cd07833 STKc_CDKL Catalytic do  99.9 2.9E-27 6.2E-32  232.3  13.4  180    1-180   106-288 (288)
133 cd07857 STKc_MPK1 Catalytic do  99.9   2E-27 4.4E-32  240.3  12.3  182    1-183   111-298 (332)
134 cd07846 STKc_CDKL2_3 Catalytic  99.9 2.3E-27   5E-32  233.0  12.3  179    1-180   106-286 (286)
135 cd05605 STKc_GRK4_like Catalyt  99.9 1.7E-27 3.7E-32  235.6  11.3  158    1-186   108-270 (285)
136 cd05603 STKc_SGK2 Catalytic do  99.9 1.8E-27 3.9E-32  239.6  11.6  154    1-185   102-259 (321)
137 KOG0201 Serine/threonine prote  99.9   3E-28 6.6E-33  246.2   5.8  152    1-182   117-268 (467)
138 cd07870 STKc_PFTAIRE2 Catalyti  99.9 3.2E-27 6.9E-32  233.4  12.8  178    2-180   110-291 (291)
139 PHA03211 serine/threonine kina  99.9 1.2E-27 2.5E-32  253.9  10.3  179    1-182   266-460 (461)
140 cd07852 STKc_MAPK15 Catalytic   99.9   3E-27 6.6E-32  239.3  12.8  183    1-183   113-301 (337)
141 cd05588 STKc_aPKC Catalytic do  99.9 2.4E-27 5.1E-32  240.1  11.8  154    1-185   102-270 (329)
142 cd07842 STKc_CDK8_like Catalyt  99.9   2E-27 4.3E-32  236.8  10.9  179    2-180   115-316 (316)
143 cd07838 STKc_CDK4_6_like Catal  99.9   5E-27 1.1E-31  230.2  13.4  175    1-180   113-287 (287)
144 cd07880 STKc_p38gamma_MAPK12 C  99.9 3.3E-27 7.3E-32  240.3  12.6  180    1-184   124-305 (343)
145 cd05615 STKc_cPKC_alpha Cataly  99.9 3.3E-27 7.1E-32  238.5  12.2  154    1-185   107-265 (323)
146 cd06649 PKc_MEK2 Catalytic dom  99.9 3.3E-27 7.2E-32  239.0  12.1  178    2-183   110-307 (331)
147 cd07854 STKc_MAPK4_6 Catalytic  99.9 5.3E-27 1.1E-31  238.6  12.8  182    1-183   120-306 (342)
148 cd05607 STKc_GRK7 Catalytic do  99.9 2.7E-27 5.8E-32  233.3  10.3  157    2-185   102-262 (277)
149 cd07830 STKc_MAK_like Catalyti  99.9 1.1E-26 2.3E-31  228.0  13.9  177    2-180   106-283 (283)
150 cd05617 STKc_aPKC_zeta Catalyt  99.9 5.2E-27 1.1E-31  237.4  11.9  155    1-185   102-268 (327)
151 KOG0610 Putative serine/threon  99.9 4.4E-27 9.6E-32  236.3  11.1  166    2-195   186-410 (459)
152 PLN03225 Serine/threonine-prot  99.9 6.2E-27 1.3E-31  254.1  13.0  176    1-185   261-458 (566)
153 cd07877 STKc_p38alpha_MAPK14 C  99.9 8.6E-27 1.9E-31  237.5  13.3  181    1-185   126-308 (345)
154 PF00069 Pkinase:  Protein kina  99.9 3.2E-27 6.8E-32  228.0   9.1  157    1-180   104-260 (260)
155 cd05624 STKc_MRCK_beta Catalyt  99.9 1.1E-26 2.4E-31  235.3  13.3  161    1-185   108-274 (331)
156 KOG0596 Dual specificity; seri  99.9 4.4E-27 9.5E-32  242.9  10.3  156    2-185   467-635 (677)
157 cd05630 STKc_GRK6 Catalytic do  99.9 4.2E-27   9E-32  233.1   9.8  157    1-185   108-269 (285)
158 PTZ00283 serine/threonine prot  99.9 4.9E-27 1.1E-31  251.5  10.8  153    1-182   149-302 (496)
159 cd06625 STKc_MEKK3_like Cataly  99.9 7.5E-27 1.6E-31  226.4  11.1  152    1-180   110-263 (263)
160 KOG0668 Casein kinase II, alph  99.9 2.2E-27 4.8E-32  222.7   6.9  180    1-182   138-327 (338)
161 cd05632 STKc_GRK5 Catalytic do  99.9   9E-27   2E-31  230.5  11.6  157    1-185   108-269 (285)
162 KOG0595 Serine/threonine-prote  99.9 2.9E-27 6.3E-32  237.4   8.1  155    1-184   115-275 (429)
163 cd05574 STKc_phototropin_like   99.9 1.1E-26 2.3E-31  232.7  11.9  160    1-188   109-300 (316)
164 cd08223 STKc_Nek4 Catalytic do  99.9 1.6E-26 3.6E-31  223.2  12.2  150    1-180   108-257 (257)
165 PTZ00267 NIMA-related protein   99.9 9.7E-27 2.1E-31  248.0  11.3  153    1-182   175-328 (478)
166 cd06637 STKc_TNIK Catalytic do  99.9 1.5E-26 3.3E-31  225.6  10.9  152    1-180   117-272 (272)
167 cd06643 STKc_SLK Catalytic dom  99.9 2.4E-26 5.1E-31  226.2  12.2  155    2-183   110-268 (282)
168 KOG0612 Rho-associated, coiled  99.9 1.2E-26 2.6E-31  255.0  11.1  168    2-197   182-358 (1317)
169 KOG0580 Serine/threonine prote  99.9 8.3E-27 1.8E-31  220.1   7.9  149    1-182   130-278 (281)
170 cd06636 STKc_MAP4K4_6 Catalyti  99.9 2.3E-26 5.1E-31  226.0  10.8  152    1-180   127-282 (282)
171 KOG0983 Mitogen-activated prot  99.9   3E-26 6.6E-31  219.8  11.0  153    3-183   199-355 (391)
172 cd06658 STKc_PAK5 Catalytic do  99.9 2.8E-26 6.1E-31  228.1  11.1  157    1-185   124-280 (292)
173 cd05633 STKc_GRK3 Catalytic do  99.9   2E-26 4.3E-31  227.5   9.9  154    1-185   103-263 (279)
174 KOG0607 MAP kinase-interacting  99.9 1.6E-26 3.6E-31  225.5   8.8  163    1-188   182-372 (463)
175 KOG4279 Serine/threonine prote  99.9 2.2E-26 4.8E-31  241.8  10.2  155    2-183   682-838 (1226)
176 cd06610 STKc_OSR1_SPAK Catalyt  99.9 3.5E-26 7.7E-31  221.5  10.8  157    1-180   108-267 (267)
177 KOG0192 Tyrosine kinase specif  99.9 5.4E-26 1.2E-30  233.3  12.3  147    2-176   149-298 (362)
178 KOG0589 Serine/threonine prote  99.9 2.4E-26 5.1E-31  236.7   9.6  152    1-182   112-263 (426)
179 KOG0611 Predicted serine/threo  99.9 2.1E-26 4.5E-31  230.3   8.5  149    1-181   159-307 (668)
180 cd06616 PKc_MKK4 Catalytic dom  99.9 3.8E-26 8.2E-31  225.2  10.2  157    2-183   114-273 (288)
181 cd06628 STKc_MAPKKK_Byr2_like   99.9 6.5E-26 1.4E-30  220.5  11.5  151    1-180   112-267 (267)
182 cd06644 STKc_STK10_LOK Catalyt  99.9 7.4E-26 1.6E-30  224.0  11.8  157    1-184   116-276 (292)
183 cd05606 STKc_beta_ARK Catalyti  99.9 6.4E-26 1.4E-30  223.6  11.2  157    1-186   103-264 (278)
184 cd08216 PK_STRAD Pseudokinase   99.9 7.3E-26 1.6E-30  226.1  11.6  179    1-183   107-301 (314)
185 cd07856 STKc_Sty1_Hog1 Catalyt  99.9 6.6E-26 1.4E-30  229.6  11.4  179    1-183   114-294 (328)
186 cd05102 PTKc_VEGFR3 Catalytic   99.9   7E-26 1.5E-30  229.3  11.5  147    2-176   181-329 (338)
187 cd08529 STKc_FA2-like Catalyti  99.9   1E-25 2.2E-30  217.2  12.0  150    1-180   107-256 (256)
188 cd08227 PK_STRAD_alpha Pseudok  99.9 6.7E-26 1.4E-30  228.8  11.1  180    1-182   107-312 (327)
189 cd05611 STKc_Rim15_like Cataly  99.9 7.6E-26 1.6E-30  219.5  11.0  153    1-184   103-258 (260)
190 cd06654 STKc_PAK1 Catalytic do  99.9 6.2E-26 1.3E-30  225.9  10.4  155    1-183   122-276 (296)
191 cd06651 STKc_MEKK3 Catalytic d  99.9 8.5E-26 1.8E-30  220.4  10.9  152    1-181   112-265 (266)
192 cd06639 STKc_myosinIIIB Cataly  99.9   1E-25 2.2E-30  222.7  11.5  154    1-181   134-291 (291)
193 cd06655 STKc_PAK2 Catalytic do  99.9 7.7E-26 1.7E-30  225.4  10.8  155    1-183   121-275 (296)
194 cd05572 STKc_cGK_PKG Catalytic  99.9 1.3E-25 2.8E-30  218.2  12.0  154    2-185   100-260 (262)
195 cd06608 STKc_myosinIII_like Ca  99.9 7.2E-26 1.6E-30  220.0  10.2  152    2-180   120-275 (275)
196 cd06659 STKc_PAK6 Catalytic do  99.9 9.2E-26   2E-30  224.9  11.2  157    1-185   123-279 (297)
197 cd06648 STKc_PAK_II Catalytic   99.9 1.3E-25 2.7E-30  222.3  11.8  156    1-184   121-276 (285)
198 cd06609 STKc_MST3_like Catalyt  99.9   1E-25 2.2E-30  220.6  10.8  154    1-183   104-257 (274)
199 cd05609 STKc_MAST Catalytic do  99.9 1.3E-25 2.9E-30  224.1  11.8  160    1-187   107-283 (305)
200 KOG0690 Serine/threonine prote  99.9 7.6E-26 1.7E-30  221.2   9.7  153    3-186   276-433 (516)
201 cd06631 STKc_YSK4 Catalytic do  99.9   1E-25 2.3E-30  219.1  10.6  153    1-180   108-265 (265)
202 cd06650 PKc_MEK1 Catalytic dom  99.9 9.9E-26 2.1E-30  228.8  10.8  177    2-183   110-305 (333)
203 cd06612 STKc_MST1_2 Catalytic   99.9 9.2E-26   2E-30  217.6  10.0  152    1-180   105-256 (256)
204 cd05579 STKc_MAST_like Catalyt  99.9 1.5E-25 3.3E-30  216.2  11.1  156    1-184    99-264 (265)
205 PHA03390 pk1 serine/threonine-  99.9 1.1E-25 2.4E-30  220.9  10.1  150    1-182   115-267 (267)
206 cd06622 PKc_MAPKK_PBS2_like Ca  99.9 2.1E-25 4.7E-30  219.6  12.2  155    2-184   109-269 (286)
207 cd06619 PKc_MKK5 Catalytic dom  99.9 1.1E-25 2.5E-30  221.5  10.2  156    1-183   101-259 (279)
208 cd05580 STKc_PKA Catalytic dom  99.9 1.7E-25 3.7E-30  221.5  11.4  151    2-186   108-263 (290)
209 cd06645 STKc_MAP4K3 Catalytic   99.9 1.4E-25   3E-30  218.5  10.6  153    2-179   113-267 (267)
210 KOG0579 Ste20-like serine/thre  99.9 1.2E-25 2.6E-30  234.3   9.9  155    2-183   137-295 (1187)
211 cd05577 STKc_GRK Catalytic dom  99.9 1.4E-25   3E-30  220.4   9.7  156    2-185   102-262 (277)
212 cd06611 STKc_SLK_like Catalyti  99.9   2E-25 4.3E-30  219.2  10.7  156    1-183   109-268 (280)
213 KOG4645 MAPKKK (MAP kinase kin  99.9   8E-26 1.7E-30  251.2   8.6  158    2-186  1341-1503(1509)
214 cd06656 STKc_PAK3 Catalytic do  99.9 9.2E-26   2E-30  224.7   8.2  154    2-183   122-275 (297)
215 cd06617 PKc_MKK3_6 Catalytic d  99.9 2.7E-25 5.8E-30  218.0  11.2  155    1-184   109-268 (283)
216 cd06638 STKc_myosinIIIA Cataly  99.9 2.7E-25 5.8E-30  218.6  11.2  153    1-180   130-286 (286)
217 cd05048 PTKc_Ror Catalytic Dom  99.9 2.6E-25 5.6E-30  218.4  10.6  148    1-177   130-279 (283)
218 PHA02988 hypothetical protein;  99.9 3.7E-25   8E-30  219.4  11.2  144    2-176   129-274 (283)
219 cd06615 PKc_MEK Catalytic doma  99.9 3.2E-25 6.9E-30  222.0  10.6  178    1-183   105-293 (308)
220 cd06629 STKc_MAPKKK_Bck1_like   99.9 5.1E-25 1.1E-29  215.1  11.9  156    2-180   115-272 (272)
221 cd06917 STKc_NAK1_like Catalyt  99.9 2.7E-25   6E-30  217.6   9.8  156    1-184   107-262 (277)
222 PHA02882 putative serine/threo  99.9 3.4E-25 7.4E-30  220.5  10.4  154    1-176   132-291 (294)
223 cd06632 STKc_MEKK1_plant Catal  99.9 4.9E-25 1.1E-29  212.4  11.1  150    2-180   109-258 (258)
224 KOG0614 cGMP-dependent protein  99.9   2E-25 4.4E-30  228.4   8.7  155    3-187   528-687 (732)
225 cd08218 STKc_Nek1 Catalytic do  99.9 4.7E-25   1E-29  213.2  10.9  150    1-180   107-256 (256)
226 cd06657 STKc_PAK4 Catalytic do  99.9 5.5E-25 1.2E-29  219.0  11.6  157    1-185   122-278 (292)
227 cd06624 STKc_ASK Catalytic dom  99.9 5.6E-25 1.2E-29  214.6  11.2  152    2-180   115-268 (268)
228 cd06613 STKc_MAP4K3_like Catal  99.9 4.4E-25 9.6E-30  213.5  10.2  154    1-179   107-262 (262)
229 cd05052 PTKc_Abl Catalytic dom  99.9 7.2E-25 1.6E-29  213.5  11.6  148    1-177   110-258 (263)
230 cd06630 STKc_MEKK1 Catalytic d  99.9   5E-25 1.1E-29  214.2  10.4  156    1-181   109-268 (268)
231 cd06605 PKc_MAPKK Catalytic do  99.9 3.2E-25   7E-30  215.1   8.8  151    1-182   106-262 (265)
232 cd08220 STKc_Nek8 Catalytic do  99.9 7.2E-25 1.6E-29  211.3  11.2  149    1-180   107-256 (256)
233 cd08226 PK_STRAD_beta Pseudoki  99.9 3.9E-25 8.5E-30  223.3   9.4  180    1-183   107-314 (328)
234 cd05091 PTKc_Ror2 Catalytic do  99.9 6.5E-25 1.4E-29  215.8  10.8  147    2-177   131-279 (283)
235 cd06607 STKc_TAO Catalytic dom  99.9   1E-24 2.2E-29  217.8  12.3  151    1-183   121-273 (307)
236 cd08221 STKc_Nek9 Catalytic do  99.9 9.7E-25 2.1E-29  211.0  11.5  150    1-180   107-256 (256)
237 KOG0584 Serine/threonine prote  99.9 3.4E-25 7.4E-30  232.3   8.6  150    2-183   150-302 (632)
238 cd05581 STKc_PDK1 Catalytic do  99.9 7.2E-25 1.6E-29  213.8  10.4  150    1-180   108-280 (280)
239 cd06626 STKc_MEKK4 Catalytic d  99.9 1.2E-24 2.7E-29  210.6  12.0  155    1-180   105-264 (264)
240 cd06646 STKc_MAP4K5 Catalytic   99.9 3.7E-25   8E-30  215.5   8.3  154    1-179   112-267 (267)
241 PTZ00266 NIMA-related protein   99.9 6.1E-25 1.3E-29  246.7  10.9  153    1-183   124-301 (1021)
242 cd05122 PKc_STE Catalytic doma  99.9 1.1E-24 2.5E-29  207.7  11.0  150    1-179   104-253 (253)
243 cd05072 PTKc_Lyn Catalytic dom  99.9 1.3E-24 2.8E-29  210.9  11.4  146    2-176   110-256 (261)
244 cd05075 PTKc_Axl Catalytic dom  99.9 9.9E-25 2.1E-29  212.8  10.6  148    1-177   118-267 (272)
245 PLN00181 protein SPA1-RELATED;  99.9 3.3E-25 7.1E-30  249.8   8.2  152    1-183    86-271 (793)
246 cd05613 STKc_MSK1_N N-terminal  99.9 8.4E-25 1.8E-29  216.0  10.1  159    2-185   112-276 (290)
247 cd08217 STKc_Nek2 Catalytic do  99.9 1.2E-24 2.6E-29  209.9  10.8  149    2-180   112-265 (265)
248 cd05054 PTKc_VEGFR Catalytic d  99.9 1.1E-24 2.4E-29  221.8  11.0  148    2-177   180-329 (337)
249 cd06652 STKc_MEKK2 Catalytic d  99.9 1.2E-24 2.6E-29  211.9  10.6  152    1-181   112-265 (265)
250 cd08215 STKc_Nek Catalytic dom  99.9 1.2E-24 2.5E-29  208.9  10.3  150    1-180   109-258 (258)
251 cd06633 STKc_TAO3 Catalytic do  99.9 1.8E-24 3.9E-29  217.2  12.1  152    1-184   127-280 (313)
252 cd05049 PTKc_Trk Catalytic dom  99.9 1.5E-24 3.4E-29  212.3  11.2  147    1-176   128-276 (280)
253 KOG1035 eIF-2alpha kinase GCN2  99.9 6.4E-25 1.4E-29  243.1   9.4  153    1-181   703-875 (1351)
254 cd06618 PKc_MKK7 Catalytic dom  99.9 1.2E-24 2.6E-29  216.0  10.5  154    2-183   121-279 (296)
255 cd05578 STKc_Yank1 Catalytic d  99.9 1.5E-24 3.2E-29  210.2  10.8  149    1-180   106-258 (258)
256 cd06634 STKc_TAO2 Catalytic do  99.9 1.6E-24 3.6E-29  216.8  11.5  151    1-183   121-273 (308)
257 cd06640 STKc_MST4 Catalytic do  99.9 1.2E-24 2.5E-29  213.8   9.9  155    1-185   107-261 (277)
258 cd05035 PTKc_Axl_like Catalyti  99.9 2.2E-24 4.8E-29  209.9  11.7  148    1-177   119-268 (273)
259 cd06647 STKc_PAK_I Catalytic d  99.9 8.9E-25 1.9E-29  217.2   8.9  155    1-183   121-275 (293)
260 cd08225 STKc_Nek5 Catalytic do  99.9 1.7E-24 3.8E-29  208.8  10.6  149    2-180   108-257 (257)
261 cd05071 PTKc_Src Catalytic dom  99.9 2.1E-24 4.5E-29  210.6  11.2  146    2-176   109-255 (262)
262 cd05070 PTKc_Fyn_Yrk Catalytic  99.9 2.2E-24 4.8E-29  209.5  11.3  147    1-176   108-255 (260)
263 cd05123 STKc_AGC Catalytic dom  99.9 2.8E-24 6.1E-29  206.4  11.6  149    1-180    99-250 (250)
264 cd05106 PTKc_CSF-1R Catalytic   99.9 1.9E-24 4.1E-29  223.3  11.0  147    2-176   219-367 (374)
265 cd06642 STKc_STK25-YSK1 Cataly  99.9 1.3E-24 2.9E-29  213.2   9.3  153    1-183   107-259 (277)
266 cd05096 PTKc_DDR1 Catalytic do  99.9 2.3E-24   5E-29  214.8  11.0  154    1-176   144-300 (304)
267 cd05053 PTKc_FGFR Catalytic do  99.9 3.9E-24 8.5E-29  211.3  12.5  148    1-177   138-287 (293)
268 cd06614 STKc_PAK Catalytic dom  99.9 2.4E-24 5.1E-29  212.4  11.0  155    1-183   122-276 (286)
269 cd06623 PKc_MAPKK_plant_like C  99.9 1.9E-24 4.1E-29  209.0  10.1  152    1-182   105-261 (264)
270 cd06627 STKc_Cdc7_like Catalyt  99.9 2.8E-24   6E-29  206.4  11.1  150    1-180   105-254 (254)
271 cd08219 STKc_Nek3 Catalytic do  99.9 3.1E-24 6.7E-29  207.6  11.4  147    1-177   106-252 (255)
272 cd05061 PTKc_InsR Catalytic do  99.9   3E-24 6.5E-29  212.3  11.6  154    2-184   126-287 (288)
273 cd05059 PTKc_Tec_like Catalyti  99.9 2.5E-24 5.4E-29  208.9  10.8  147    2-177   107-254 (256)
274 cd00192 PTKc Catalytic domain   99.9 3.8E-24 8.2E-29  205.8  11.8  148    1-177   111-260 (262)
275 cd05069 PTKc_Yes Catalytic dom  99.9   3E-24 6.5E-29  208.8  11.2  146    2-176   109-255 (260)
276 cd05114 PTKc_Tec_Rlk Catalytic  99.9 2.7E-24 5.9E-29  208.3  10.8  146    2-176   107-253 (256)
277 cd05094 PTKc_TrkC Catalytic do  99.9 2.6E-24 5.6E-29  213.1  10.8  147    1-176   129-277 (291)
278 cd05093 PTKc_TrkB Catalytic do  99.9   3E-24 6.4E-29  212.4  11.1  147    1-176   126-274 (288)
279 cd05113 PTKc_Btk_Bmx Catalytic  99.9 2.7E-24 5.8E-29  209.1  10.6  148    1-177   106-254 (256)
280 cd06635 STKc_TAO1 Catalytic do  99.9 4.4E-24 9.5E-29  214.6  12.3  151    1-183   131-283 (317)
281 cd05062 PTKc_IGF-1R Catalytic   99.9 2.6E-24 5.7E-29  211.1  10.4  147    2-177   126-274 (277)
282 cd05089 PTKc_Tie1 Catalytic do  99.9 3.3E-24 7.2E-29  213.1  11.1  146    1-177   125-271 (297)
283 cd05583 STKc_MSK_N N-terminal   99.9 2.9E-24 6.4E-29  211.9  10.6  158    2-185   112-274 (288)
284 cd05068 PTKc_Frk_like Catalyti  99.9 3.9E-24 8.6E-29  207.8  11.3  147    1-176   109-256 (261)
285 cd06621 PKc_MAPKK_Pek1_like Ca  99.9 3.2E-24 6.9E-29  212.0  10.6  156    1-182   111-271 (287)
286 cd05576 STKc_RPK118_like Catal  99.9 7.7E-25 1.7E-29  210.9   5.9  142    1-180    91-237 (237)
287 cd05108 PTKc_EGFR Catalytic do  99.9 3.5E-24 7.6E-29  215.0  10.8  147    2-177   116-264 (316)
288 KOG0577 Serine/threonine prote  99.9 3.4E-24 7.3E-29  222.5  10.8  150    2-183   133-284 (948)
289 cd05109 PTKc_HER2 Catalytic do  99.9 3.9E-24 8.6E-29  210.1  10.8  147    1-176   115-263 (279)
290 cd08530 STKc_CNK2-like Catalyt  99.9 5.8E-24 1.3E-28  204.7  11.8  147    2-180   110-256 (256)
291 cd05064 PTKc_EphR_A10 Catalyti  99.9 3.6E-24 7.9E-29  209.3  10.4  147    1-176   113-260 (266)
292 KOG4236 Serine/threonine prote  99.9 8.8E-25 1.9E-29  224.3   6.2  152    1-183   670-825 (888)
293 cd06606 STKc_MAPKKK Catalytic   99.9 4.1E-24   9E-29  204.6  10.4  153    1-180   107-260 (260)
294 KOG0696 Serine/threonine prote  99.9 3.1E-24 6.7E-29  215.2   9.8  153    3-186   458-615 (683)
295 cd05116 PTKc_Syk Catalytic dom  99.9 4.6E-24   1E-28  207.1  10.8  146    2-176   102-250 (257)
296 cd05036 PTKc_ALK_LTK Catalytic  99.9 4.1E-24 8.9E-29  210.0  10.5  148    1-177   122-274 (277)
297 cd05067 PTKc_Lck_Blk Catalytic  99.9 6.5E-24 1.4E-28  206.2  11.4  147    1-176   108-255 (260)
298 cd05032 PTKc_InsR_like Catalyt  99.9 7.2E-24 1.6E-28  207.3  11.6  146    2-176   126-273 (277)
299 cd05092 PTKc_TrkA Catalytic do  99.9 5.3E-24 1.1E-28  209.7  10.7  146    2-176   129-276 (280)
300 KOG0197 Tyrosine kinases [Sign  99.9 7.1E-24 1.5E-28  219.4  12.0  145    2-175   310-455 (468)
301 cd05148 PTKc_Srm_Brk Catalytic  99.9 7.6E-24 1.7E-28  205.3  11.3  145    2-176   111-256 (261)
302 KOG0586 Serine/threonine prote  99.9 1.4E-24   3E-29  227.4   6.4  153    1-184   161-313 (596)
303 cd05082 PTKc_Csk Catalytic dom  99.9 6.6E-24 1.4E-28  205.7  10.6  142    2-176   109-251 (256)
304 cd05077 PTK_Jak1_rpt1 Pseudoki  99.9 5.9E-24 1.3E-28  207.8  10.3  142    1-177   111-260 (262)
305 cd05104 PTKc_Kit Catalytic dom  99.9 8.4E-24 1.8E-28  218.4  11.9  148    2-177   221-370 (375)
306 cd05090 PTKc_Ror1 Catalytic do  99.9 7.5E-24 1.6E-28  208.5  11.0  147    2-177   131-279 (283)
307 cd05033 PTKc_EphR Catalytic do  99.9 8.5E-24 1.8E-28  206.0  11.1  148    1-177   112-261 (266)
308 cd08222 STKc_Nek11 Catalytic d  99.9 9.1E-24   2E-28  204.9  11.0  149    1-180   112-260 (260)
309 cd05060 PTKc_Syk_like Catalyti  99.9 9.8E-24 2.1E-28  204.6  11.2  147    1-176   101-250 (257)
310 cd05034 PTKc_Src_like Catalyti  99.9 7.9E-24 1.7E-28  205.2  10.4  147    1-176   109-256 (261)
311 cd05056 PTKc_FAK Catalytic dom  99.9 9.6E-24 2.1E-28  206.1  11.0  147    2-177   114-261 (270)
312 cd05058 PTKc_Met_Ron Catalytic  99.9 8.2E-24 1.8E-28  205.2  10.4  147    2-177   105-255 (262)
313 cd05088 PTKc_Tie2 Catalytic do  99.9 8.7E-24 1.9E-28  211.1  10.8  145    2-177   131-276 (303)
314 cd05040 PTKc_Ack_like Catalyti  99.9 1.5E-23 3.2E-28  202.8  11.9  148    1-176   103-253 (257)
315 cd05111 PTK_HER3 Pseudokinase   99.9 1.2E-23 2.7E-28  207.2  11.6  147    1-176   115-263 (279)
316 smart00750 KIND kinase non-cat  99.9 4.7E-24   1E-28  195.6   8.0  145    1-182    23-170 (176)
317 cd06641 STKc_MST3 Catalytic do  99.9 8.2E-24 1.8E-28  207.8  10.1  153    1-183   107-259 (277)
318 cd05051 PTKc_DDR Catalytic dom  99.9 1.3E-23 2.8E-28  207.7  11.5  153    2-176   137-292 (296)
319 cd05101 PTKc_FGFR2 Catalytic d  99.9 1.1E-23 2.4E-28  209.9  11.1  147    2-177   144-292 (304)
320 cd05085 PTKc_Fer Catalytic dom  99.9 1.5E-23 3.3E-28  201.9  11.6  147    2-177   100-247 (250)
321 cd06653 STKc_MEKK3_like_1 Cata  99.9 1.3E-23 2.8E-28  204.8  10.9  150    2-180   113-264 (264)
322 cd05099 PTKc_FGFR4 Catalytic d  99.9 1.9E-23   4E-28  209.6  12.3  146    2-176   141-288 (314)
323 cd05073 PTKc_Hck Catalytic dom  99.9 2.1E-23 4.5E-28  202.9  12.2  147    1-176   108-255 (260)
324 cd05084 PTKc_Fes Catalytic dom  99.9 1.1E-23 2.5E-28  203.3  10.3  147    1-176   100-248 (252)
325 KOG0193 Serine/threonine prote  99.9 3.5E-24 7.6E-29  223.7   7.2  151    2-176   495-648 (678)
326 cd05045 PTKc_RET Catalytic dom  99.9 1.2E-23 2.6E-28  208.0  10.7  146    2-176   134-281 (290)
327 smart00219 TyrKc Tyrosine kina  99.9 1.8E-23 3.9E-28  201.3  11.6  147    1-176   109-256 (258)
328 cd06620 PKc_MAPKK_Byr1_like Ca  99.9 1.4E-23 2.9E-28  207.0  11.0  154    2-183   110-272 (284)
329 cd05112 PTKc_Itk Catalytic dom  99.9 1.2E-23 2.6E-28  203.3  10.2  147    2-177   107-254 (256)
330 cd05042 PTKc_Aatyk Catalytic d  99.9 1.2E-23 2.7E-28  205.2  10.4  151    2-176   107-265 (269)
331 cd05041 PTKc_Fes_like Catalyti  99.9 1.5E-23 3.3E-28  202.0  10.7  147    2-177   100-248 (251)
332 cd05115 PTKc_Zap-70 Catalytic   99.9 2.1E-23 4.5E-28  203.2  11.5  147    1-176   101-250 (257)
333 cd08228 STKc_Nek6 Catalytic do  99.9 1.2E-23 2.6E-28  204.6   9.8  148    2-177   113-261 (267)
334 cd05047 PTKc_Tie Catalytic dom  99.9 1.5E-23 3.2E-28  205.2  10.4  145    1-176   118-263 (270)
335 KOG1290 Serine/threonine prote  99.9 9.7E-24 2.1E-28  215.6   9.2  147   34-186   393-559 (590)
336 cd05043 PTK_Ryk Pseudokinase d  99.9 2.1E-23 4.6E-28  204.7  10.7  146    2-176   124-271 (280)
337 cd05098 PTKc_FGFR1 Catalytic d  99.9 1.7E-23 3.8E-28  208.9  10.2  148    1-177   146-295 (307)
338 cd05063 PTKc_EphR_A2 Catalytic  99.9 2.7E-23 5.9E-28  202.5  11.0  147    1-176   113-262 (268)
339 cd08229 STKc_Nek7 Catalytic do  99.9 2.6E-23 5.6E-28  202.2  10.8  146    2-176   113-260 (267)
340 cd05100 PTKc_FGFR3 Catalytic d  99.9 2.7E-23 5.8E-28  210.4  11.2  147    2-177   141-289 (334)
341 cd05078 PTK_Jak2_Jak3_rpt1 Pse  99.9 2.6E-23 5.7E-28  202.1  10.6  142    1-177   106-256 (258)
342 cd05055 PTKc_PDGFR Catalytic d  99.9 2.9E-23 6.3E-28  207.4  10.7  147    2-176   148-296 (302)
343 KOG4721 Serine/threonine prote  99.9 4.4E-24 9.5E-29  220.9   4.8  146    2-177   219-364 (904)
344 cd05083 PTKc_Chk Catalytic dom  99.9 4.1E-23 8.9E-28  199.9  11.0  142    2-176   107-249 (254)
345 KOG1989 ARK protein kinase fam  99.9 4.8E-24   1E-28  231.2   4.6  148    1-179   150-309 (738)
346 cd05074 PTKc_Tyro3 Catalytic d  99.9   4E-23 8.7E-28  201.5  10.7  148    1-177   119-268 (273)
347 cd05050 PTKc_Musk Catalytic do  99.9 4.4E-23 9.6E-28  203.5  10.8  147    1-176   136-284 (288)
348 cd05097 PTKc_DDR_like Catalyti  99.9   5E-23 1.1E-27  204.3  11.2  153    2-176   136-291 (295)
349 smart00220 S_TKc Serine/Threon  99.9 5.1E-23 1.1E-27  194.5  10.8  152    1-180    93-244 (244)
350 KOG2345 Serine/threonine prote  99.9 2.7E-23 5.9E-28  197.3   8.7  152    1-177   133-296 (302)
351 cd05110 PTKc_HER4 Catalytic do  99.9 4.8E-23   1E-27  205.6  10.8  148    1-177   115-264 (303)
352 cd05044 PTKc_c-ros Catalytic d  99.9 6.2E-23 1.4E-27  199.8  11.3  146    2-176   113-265 (269)
353 cd05046 PTK_CCK4 Pseudokinase   99.9 4.7E-23   1E-27  201.6  10.4  149    1-177   123-272 (275)
354 cd05080 PTKc_Tyk2_rpt2 Catalyt  99.9 6.3E-23 1.4E-27  202.0  11.3  161    1-176   113-276 (283)
355 cd05610 STKc_MASTL Catalytic d  99.9 4.6E-23   1E-27  228.2  11.4  102   57-185   541-642 (669)
356 cd05095 PTKc_DDR2 Catalytic do  99.9 7.7E-23 1.7E-27  203.0  11.8  153    2-176   137-292 (296)
357 cd05086 PTKc_Aatyk2 Catalytic   99.9 8.3E-23 1.8E-27  199.9  11.9  151    2-176   106-264 (268)
358 cd05039 PTKc_Csk_like Catalyti  99.9 6.4E-23 1.4E-27  198.5  10.6  143    1-176   108-251 (256)
359 KOG0608 Warts/lats-like serine  99.9 1.5E-23 3.4E-28  218.9   6.5  158    2-186   736-937 (1034)
360 cd05103 PTKc_VEGFR2 Catalytic   99.9 6.6E-23 1.4E-27  208.8  11.0  148    2-177   186-335 (343)
361 cd05065 PTKc_EphR_B Catalytic   99.9 8.9E-23 1.9E-27  199.2  11.2  146    2-176   113-263 (269)
362 cd05076 PTK_Tyk2_rpt1 Pseudoki  99.9 6.3E-23 1.4E-27  202.0  10.2  142    1-177   123-272 (274)
363 cd05079 PTKc_Jak1_rpt2 Catalyt  99.9 1.1E-22 2.5E-27  200.4  12.0  163    1-177   115-279 (284)
364 cd05066 PTKc_EphR_A Catalytic   99.9 7.5E-23 1.6E-27  199.7  10.4  147    1-176   112-261 (267)
365 cd05037 PTK_Jak_rpt1 Pseudokin  99.9 6.5E-23 1.4E-27  198.0   9.8  141    1-176   107-256 (259)
366 cd08224 STKc_Nek6_Nek7 Catalyt  99.9 1.3E-22 2.8E-27  196.8  11.4  147    1-176   112-260 (267)
367 cd08528 STKc_Nek10 Catalytic d  99.9 8.8E-23 1.9E-27  199.0  10.3  146    2-177   120-266 (269)
368 cd05087 PTKc_Aatyk1_Aatyk3 Cat  99.9 1.6E-22 3.4E-27  197.7  11.7  151    2-176   107-265 (269)
369 KOG1027 Serine/threonine prote  99.9 6.1E-23 1.3E-27  220.6   9.4  153    1-182   612-772 (903)
370 KOG1167 Serine/threonine prote  99.9 1.3E-22 2.7E-27  204.8  10.9  182    1-182   138-386 (418)
371 cd05105 PTKc_PDGFR_alpha Catal  99.9 1.1E-22 2.4E-27  212.2  11.0  147    2-176   244-392 (400)
372 cd05057 PTKc_EGFR_like Catalyt  99.9 1.7E-22 3.8E-27  198.4  11.6  147    1-176   115-263 (279)
373 PLN03224 probable serine/threo  99.9 1.6E-22 3.5E-27  215.8  11.3  166    1-182   315-505 (507)
374 PF07714 Pkinase_Tyr:  Protein   99.9 5.8E-23 1.3E-27  200.6   6.7  147    1-176   109-257 (259)
375 PRK13184 pknD serine/threonine  99.9 1.2E-22 2.7E-27  227.2  10.0  149    2-177   120-285 (932)
376 KOG1006 Mitogen-activated prot  99.9 6.8E-23 1.5E-27  196.2   6.3  155    4-183   176-333 (361)
377 cd05081 PTKc_Jak2_Jak3_rpt2 Ca  99.9 3.2E-22 6.8E-27  196.8  10.8  164    1-177   114-279 (284)
378 KOG0574 STE20-like serine/thre  99.9 1.3E-23 2.7E-28  203.9   0.2  155    2-184   136-290 (502)
379 cd05038 PTKc_Jak_rpt2 Catalyti  99.9   6E-22 1.3E-26  193.9  10.9  151    1-176   115-278 (284)
380 cd05107 PTKc_PDGFR_beta Cataly  99.9 5.8E-22 1.2E-26  207.0  11.2  148    2-177   246-395 (401)
381 KOG0695 Serine/threonine prote  99.9 1.3E-21 2.8E-26  192.2   9.1  153    3-186   359-525 (593)
382 KOG0590 Checkpoint kinase and   99.8 3.1E-21 6.7E-26  210.0   7.7  164    1-184   426-592 (601)
383 KOG1151 Tousled-like protein k  99.8 2.6E-20 5.7E-25  188.4   9.9  156    1-182   574-746 (775)
384 KOG1095 Protein tyrosine kinas  99.8 2.5E-20 5.4E-25  208.1   9.7  146    2-176   809-956 (1025)
385 KOG0587 Traf2- and Nck-interac  99.8 2.4E-20 5.3E-25  201.6   8.4  155    2-183   130-288 (953)
386 KOG1026 Nerve growth factor re  99.8 5.4E-20 1.2E-24  199.3   8.9  145    2-175   610-756 (774)
387 KOG1187 Serine/threonine prote  99.8   1E-19 2.2E-24  187.5   9.9  157    2-176   181-347 (361)
388 KOG0984 Mitogen-activated prot  99.8 3.9E-20 8.4E-25  171.9   5.9  107    3-111   156-267 (282)
389 KOG4250 TANK binding protein k  99.8 3.6E-20 7.8E-25  196.9   6.3   96    2-99    127-226 (732)
390 KOG0194 Protein tyrosine kinas  99.8 1.3E-19 2.8E-24  189.9   9.6  146    2-176   269-415 (474)
391 KOG0196 Tyrosine kinase, EPH (  99.8 1.1E-19 2.4E-24  194.3   7.8  148    1-177   737-887 (996)
392 KOG4257 Focal adhesion tyrosin  99.8 5.9E-20 1.3E-24  192.2   4.5  145    2-175   498-643 (974)
393 KOG0200 Fibroblast/platelet-de  99.8   1E-18 2.2E-23  191.6  11.2  146    2-176   425-574 (609)
394 KOG0199 ACK and related non-re  99.8 6.9E-19 1.5E-23  186.2   9.1  151    2-181   219-372 (1039)
395 KOG0606 Microtubule-associated  99.8 6.6E-19 1.4E-23  193.8   6.3  157    3-186   151-324 (1205)
396 KOG1345 Serine/threonine kinas  99.7 1.6E-18 3.5E-23  166.8   7.1  141    2-168   128-275 (378)
397 KOG4278 Protein tyrosine kinas  99.7   3E-18 6.5E-23  179.2   8.6  146    2-176   372-518 (1157)
398 PLN00113 leucine-rich repeat r  99.7 4.4E-18 9.6E-23  195.7   8.0  157    1-177   786-947 (968)
399 cd00180 PKc Catalytic domain o  99.7 8.9E-18 1.9E-22  154.1   8.3  117    1-178    98-215 (215)
400 KOG1094 Discoidin domain recep  99.7 1.3E-17 2.8E-22  173.9   8.8  153    2-176   644-799 (807)
401 KOG1024 Receptor-like protein   99.7 2.3E-17 5.1E-22  165.3   9.2  146    2-176   403-550 (563)
402 KOG3653 Transforming growth fa  99.7 2.7E-17 5.9E-22  168.3   6.2  164    3-175   315-497 (534)
403 KOG0576 Mitogen-activated prot  99.7 7.6E-17 1.7E-21  170.3   8.4  156    2-182   119-276 (829)
404 KOG1152 Signal transduction se  99.7 3.3E-17 7.2E-22  170.7   3.5   95    1-98    676-770 (772)
405 COG0515 SPS1 Serine/threonine   99.6   1E-15 2.2E-20  147.6  11.5  163    1-183   107-281 (384)
406 PF14531 Kinase-like:  Kinase-l  99.6 2.8E-17 6.1E-22  163.1   0.2  130    2-168   152-288 (288)
407 KOG1025 Epidermal growth facto  99.6 7.7E-16 1.7E-20  165.7  10.2  146    2-176   805-952 (1177)
408 KOG0603 Ribosomal protein S6 k  99.6 1.4E-16   3E-21  168.3   4.2  143    3-186   105-252 (612)
409 smart00221 STYKc Protein kinas  99.6 4.9E-16 1.1E-20  145.9   7.0  109    1-109   104-214 (225)
410 KOG1240 Protein kinase contain  99.6 3.6E-16 7.9E-21  172.7   6.9  149    1-177   126-291 (1431)
411 KOG1033 eIF-2alpha kinase PEK/  99.6 2.5E-16 5.4E-21  163.6   1.6  145    1-180   365-515 (516)
412 KOG2052 Activin A type IB rece  99.6 1.3E-15 2.7E-20  155.2   6.5  150    2-174   315-496 (513)
413 KOG4158 BRPK/PTEN-induced prot  99.5 1.4E-14 2.9E-19  146.0   8.5  153    1-180   347-516 (598)
414 KOG1164 Casein kinase (serine/  99.4   3E-12 6.5E-17  129.9  11.2  150    2-176   129-292 (322)
415 KOG0590 Checkpoint kinase and   99.3 1.4E-13   3E-18  150.4   0.6  158    1-182   129-291 (601)
416 KOG1023 Natriuretic peptide re  99.2   8E-12 1.7E-16  131.9   6.7  154    1-176    54-219 (484)
417 PRK12274 serine/threonine prot  99.2 6.1E-12 1.3E-16  119.8   4.2  101    1-101    97-211 (218)
418 PRK09188 serine/threonine prot  99.2 2.6E-11 5.6E-16  125.0   6.5   88    1-88    117-218 (365)
419 KOG2137 Protein kinase [Signal  99.1 6.3E-11 1.4E-15  127.3   7.2  156    3-184   107-272 (700)
420 KOG1163 Casein kinase (serine/  99.1 1.4E-10   3E-15  110.8   8.3  147    2-170   118-273 (341)
421 KOG1165 Casein kinase (serine/  99.1 2.6E-10 5.7E-15  113.2   9.2  107    2-109   131-251 (449)
422 PRK10359 lipopolysaccharide co  99.1   9E-11 1.9E-15  113.5   4.2   75    2-91    142-216 (232)
423 KOG0606 Microtubule-associated  99.0 3.2E-10   7E-15  126.2   5.4  159    3-188   912-1103(1205)
424 KOG1166 Mitotic checkpoint ser  98.8 2.5E-09 5.3E-14  120.6   4.6   92    2-94    801-900 (974)
425 cd05147 RIO1_euk RIO kinase fa  98.8 3.6E-09 7.9E-14   99.5   4.2   45    1-46    123-168 (190)
426 cd05145 RIO1_like RIO kinase f  98.8 5.3E-09 1.2E-13   98.1   4.7   44    2-46    124-168 (190)
427 KOG0195 Integrin-linked kinase  98.8 7.7E-09 1.7E-13  100.4   5.7  138    3-175   297-440 (448)
428 KOG0601 Cyclin-dependent kinas  98.7 9.4E-09   2E-13  109.1   3.2  149    3-183   226-385 (524)
429 PRK01723 3-deoxy-D-manno-octul  98.6 3.4E-08 7.5E-13   96.3   4.8   43    2-44    149-191 (239)
430 smart00090 RIO RIO-like kinase  98.5 6.7E-08 1.4E-12   94.2   4.1   45    1-46    154-199 (237)
431 cd05144 RIO2_C RIO kinase fami  98.5 1.1E-07 2.3E-12   89.6   5.3   46    2-47    132-177 (198)
432 PRK10345 hypothetical protein;  98.4 1.5E-07 3.2E-12   90.2   4.0   42    1-42    110-156 (210)
433 cd05119 RIO RIO kinase family,  98.4 2.9E-07 6.3E-12   85.2   4.5   44    2-46    121-165 (187)
434 COG4248 Uncharacterized protei  98.3 2.6E-06 5.7E-11   87.7  10.6  156    2-173   124-292 (637)
435 KOG1266 Protein kinase [Signal  98.3 3.5E-07 7.6E-12   91.3   4.1  147    2-182   183-336 (458)
436 TIGR03724 arch_bud32 Kae1-asso  98.3 5.4E-07 1.2E-11   84.3   4.9   43    1-44     96-138 (199)
437 PRK14879 serine/threonine prot  98.3   9E-07 1.9E-11   83.5   4.9   42    2-44    102-143 (211)
438 PRK09605 bifunctional UGMP fam  98.2 9.6E-07 2.1E-11   96.0   4.2   44    1-45    434-477 (535)
439 KOG1243 Protein kinase [Genera  98.1 3.1E-06 6.8E-11   91.4   6.6   89    1-93    110-199 (690)
440 KOG0601 Cyclin-dependent kinas  98.1 1.6E-06 3.4E-11   92.5   4.0  144    2-181   373-518 (524)
441 cd05120 APH_ChoK_like Aminogly  98.0   7E-06 1.5E-10   71.4   4.0   44    2-45     93-139 (155)
442 cd05151 ChoK Choline Kinase (C  97.9 1.5E-05 3.2E-10   72.2   4.6   42    2-44     90-136 (170)
443 cd05146 RIO3_euk RIO kinase fa  97.9 1.4E-05 3.1E-10   75.7   4.4   44    2-46    131-175 (197)
444 COG3642 Mn2+-dependent serine/  97.6 5.8E-05 1.3E-09   70.5   4.7   42    3-45    100-141 (204)
445 PF06293 Kdo:  Lipopolysacchari  97.5 9.6E-05 2.1E-09   70.3   4.1   44    1-44    124-170 (206)
446 PRK15123 lipopolysaccharide co  97.5  0.0001 2.2E-09   73.2   4.4   43    1-43    144-193 (268)
447 TIGR01982 UbiB 2-polyprenylphe  97.4 0.00015 3.3E-09   77.0   5.5   40    7-46    269-308 (437)
448 KOG3087 Serine/threonine prote  97.2 0.00047   1E-08   64.5   4.8   42    2-43    120-164 (229)
449 PF01163 RIO1:  RIO1 family;  I  97.1 0.00049 1.1E-08   64.8   4.5   44    2-46    113-157 (188)
450 PF06176 WaaY:  Lipopolysacchar  96.7  0.0019 4.1E-08   62.3   4.8   40    3-43    143-182 (229)
451 PRK04750 ubiB putative ubiquin  96.5  0.0027 5.8E-08   69.1   4.3   38   10-47    275-316 (537)
452 PRK09902 hypothetical protein;  96.3  0.0041 8.9E-08   59.6   4.1   42    2-43    135-178 (216)
453 KOG1035 eIF-2alpha kinase GCN2  95.6   0.012 2.5E-07   68.0   4.5  140    2-183   293-440 (1351)
454 COG0478 RIO-like serine/threon  94.9   0.038 8.3E-07   54.8   5.0   42    3-44    210-251 (304)
455 KOG3741 Poly(A) ribonuclease s  94.5   0.088 1.9E-06   56.4   6.9  123    1-177   399-521 (655)
456 KOG0576 Mitogen-activated prot  94.3   0.057 1.2E-06   59.1   4.9  150    5-188   346-495 (829)
457 cd05154 ACAD10_11_like Acyl-Co  93.8   0.046 9.9E-07   51.2   2.9   31   14-44    174-206 (223)
458 TIGR00938 thrB_alt homoserine   93.7   0.086 1.9E-06   53.0   4.9   30   14-43    187-216 (307)
459 COG1718 RIO1 Serine/threonine   93.2    0.12 2.7E-06   50.7   4.9   44    2-46    173-217 (268)
460 KOG1093 Predicted protein kina  93.1   0.033 7.2E-07   59.7   0.8   92   74-182   108-199 (725)
461 cd05153 HomoserineK_II Homoser  92.9    0.12 2.6E-06   51.4   4.3   30   14-43    175-204 (296)
462 PRK05231 homoserine kinase; Pr  92.8   0.079 1.7E-06   53.4   3.0   30   14-43    187-216 (319)
463 cd05155 APH_ChoK_like_1 Unchar  92.6    0.09 1.9E-06   50.7   3.0   30   14-43    164-193 (235)
464 PF01636 APH:  Phosphotransfera  92.2   0.089 1.9E-06   49.3   2.3   30   14-43    166-196 (239)
465 TIGR02906 spore_CotS spore coa  92.0    0.18   4E-06   50.3   4.4   29   14-43    187-215 (313)
466 cd05156 ChoK_euk Choline Kinas  91.7    0.14 3.1E-06   51.1   3.2   29   15-43    180-212 (302)
467 cd05157 ETNK_euk Ethanolamine   91.7    0.13 2.9E-06   49.1   2.9   30   14-43    170-200 (235)
468 TIGR02172 Fb_sc_TIGR02172 Fibr  91.0    0.16 3.6E-06   49.0   2.7   28   15-43    154-181 (226)
469 KOG1826 Ras GTPase activating   91.0   0.034 7.3E-07   66.1  -2.3   91    5-97   1345-1440(2724)
470 cd05150 APH Aminoglycoside 3'-  90.8    0.18 3.9E-06   48.7   2.8   30   14-43    163-192 (244)
471 PRK10271 thiK thiamine kinase;  90.7     0.2 4.3E-06   47.2   2.9   28   16-44     79-106 (188)
472 COG0661 AarF Predicted unusual  90.3    0.27 5.8E-06   53.4   3.9   38   10-47    280-317 (517)
473 TIGR02721 ycfN_thiK thiamine k  90.3     0.2 4.3E-06   48.9   2.7   29   15-44    147-175 (256)
474 PF01633 Choline_kinase:  Choli  89.6    0.24 5.2E-06   46.8   2.5   29   15-43    144-173 (211)
475 COG0510 ycfN Thiamine kinase a  88.6    0.37 7.9E-06   48.0   3.2   29   15-43    154-182 (269)
476 TIGR02904 spore_ysxE spore coa  87.7    0.48   1E-05   47.7   3.4   30   15-44    197-226 (309)
477 smart00587 CHK ZnF_C4 abd HLH   87.4    0.48 1.1E-05   44.5   3.1   30   14-43    120-154 (196)
478 cd05152 MPH2' Macrolide 2'-Pho  86.9    0.41   9E-06   47.7   2.4   30   15-44    186-216 (276)
479 PLN02236 choline kinase         86.4    0.43 9.4E-06   49.1   2.3   29   15-43    201-230 (344)
480 COG2334 Putative homoserine ki  86.0    0.59 1.3E-05   48.0   3.0   28   16-43    199-227 (331)
481 PF07387 Seadorna_VP7:  Seadorn  85.7    0.69 1.5E-05   45.0   3.0   37    5-41    151-189 (308)
482 PF12260 PIP49_C:  Protein-kina  85.2       1 2.2E-05   42.4   3.9   44    2-45     66-112 (188)
483 PRK06148 hypothetical protein;  83.3    0.91   2E-05   53.5   3.3   30   14-43    203-235 (1013)
484 COG3173 Predicted aminoglycosi  82.8    0.95 2.1E-05   46.2   2.8   32   15-46    199-230 (321)
485 PRK11768 serine/threonine prot  81.6    0.92   2E-05   46.2   2.2   28   14-43    196-223 (325)
486 PLN02421 phosphotransferase, a  81.5     1.6 3.4E-05   44.7   3.9   28   16-43    184-212 (330)
487 KOG2268 Serine/threonine prote  79.4     2.6 5.6E-05   43.4   4.5   36    7-42    214-249 (465)
488 PF02958 EcKinase:  Ecdysteroid  77.3     1.4 3.1E-05   43.7   2.0   28   16-43    217-249 (294)
489 PF05445 Pox_ser-thr_kin:  Poxv  76.7     1.5 3.2E-05   45.2   1.9   16   14-29    298-313 (434)
490 PRK09550 mtnK methylthioribose  76.7     1.8   4E-05   45.5   2.7   28   14-42    223-250 (401)
491 KOG1235 Predicted unusual prot  75.7       3 6.4E-05   45.6   4.0   37   11-47    317-357 (538)
492 TIGR01767 MTRK 5-methylthiorib  74.9     1.8   4E-05   45.0   2.1   29   13-42    191-219 (370)
493 PRK06149 hypothetical protein;  74.0     2.2 4.8E-05   50.1   2.7   31   13-43    207-242 (972)
494 COG5072 ALK1 Serine/threonine   73.6     3.9 8.6E-05   42.7   4.0   29   15-44    342-370 (488)
495 PRK12396 5-methylribose kinase  70.3     3.3 7.1E-05   43.7   2.7   28   14-42    227-254 (409)
496 PLN02876 acyl-CoA dehydrogenas  63.4     5.4 0.00012   46.0   2.9   31   15-45    226-258 (822)
497 PF10707 YrbL-PhoP_reg:  PhoP r  61.9      12 0.00027   35.4   4.6   33    6-38    129-165 (199)
498 PHA03111 Ser/Thr kinase; Provi  61.5     6.4 0.00014   40.6   2.6   18   14-31    302-319 (444)
499 TIGR02457 TreS_Cterm trehalose  59.1     7.4 0.00016   42.5   2.9   24   17-41    382-405 (528)
500 PLN02756 S-methyl-5-thioribose  57.0     7.3 0.00016   41.3   2.3   28   14-42    230-257 (418)

No 1  
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=1.6e-51  Score=419.75  Aligned_cols=216  Identities=72%  Similarity=1.236  Sum_probs=210.0

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      |+|||.||+|||.+||+|||||.+|||||++|.+||+|||+|+++.......+|..+.|+||+|||+|+|...|+.++|+
T Consensus       224 mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDl  303 (560)
T KOG0600|consen  224 MKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDL  303 (560)
T ss_pred             HHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceee
Confidence            78999999999999999999999999999999999999999999998888889999999999999999999999999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||+||||.||+.|+|+|+|.++++|+++|+++||.|.+++|+..++++...|++..+|.+.+.+.+..+++.+++||..|
T Consensus       304 WS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~l  383 (560)
T KOG0600|consen  304 WSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKL  383 (560)
T ss_pred             hhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCcCHHHHHhcccccCCCCCCCCCCCCCCCCChhHHHhhHHHHHHhhhcC
Q 012191          161 LSVEPYKRATASAALASEYFSTKPYACDLSSLPIYPPSKEIDAKHREDARRKKVGG  216 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F~~~p~~~~~~~~p~~~p~~e~~~k~~~~~~r~~~~~  216 (468)
                      |.+||.+|+||.++|+|+||.+.|++|+++.+|.|++++|+++|.+.+.++...+.
T Consensus       384 L~ldP~kR~tA~~aL~seyF~t~p~~~~p~~Lp~y~~s~E~~~K~r~e~~r~~~~~  439 (560)
T KOG0600|consen  384 LSLDPDKRGTASSALQSEYFTTEPLPCDPSSLPKYPPSHELDAKRRREQKRRNKGG  439 (560)
T ss_pred             hccCccccccHHHHhcCcccccCCCCCCcccCCCCCcchhHHHHHHHHHhhccccc
Confidence            99999999999999999999999999999999999999999999999888766543


No 2  
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00  E-value=1.7e-41  Score=331.79  Aligned_cols=198  Identities=47%  Similarity=0.841  Sum_probs=175.9

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      |.|||.||+|||.+.|+|||||++|+|++..|.+||+|||+|+.++.. ..+++..+.|+||+|||+|+|...|+.++|+
T Consensus       183 ~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp-~k~~T~lVVTLWYRaPELLLG~~tyst~iDM  261 (419)
T KOG0663|consen  183 MLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSP-LKPYTPLVVTLWYRAPELLLGAKTYSTAVDM  261 (419)
T ss_pred             HHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCC-cccCcceEEEeeecCHHHhcCCcccCcchhh
Confidence            579999999999999999999999999999999999999999988754 4578899999999999999999999999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCc-cccCC-CCCCCCchhhhhcCC--CcHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH-ATLFK-PQQPYDSSLRETFKD--LPTTAVNL  156 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~-~~~~~-~~~~~~~~l~~~~~~--~s~~l~dL  156 (468)
                      ||+|||+.||++++|.|+|..+.+|+.+|+..+|.|.+..|+...... ...+. +..+| ..+...|..  +++...+|
T Consensus       262 WSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~py-n~lr~kF~~~~lse~g~~L  340 (419)
T KOG0663|consen  262 WSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPY-NNLRKKFGALSLSEQGFDL  340 (419)
T ss_pred             hhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCc-hhhhhhccccccchhHHHH
Confidence            999999999999999999999999999999999999999999855443 32222 33333 355666655  45999999


Q ss_pred             HHHhcCCCCCCCcCHHHHHhcccccCCCCCCCCCCCCCCCCChh
Q 012191          157 IETLLSVEPYKRATASAALASEYFSTKPYACDLSSLPIYPPSKE  200 (468)
Q Consensus       157 L~~mL~~DP~kRpTa~e~L~Hp~F~~~p~~~~~~~~p~~~p~~e  200 (468)
                      |..+|.+||.+|+||.++|+|+||...|.++++..+|.+|...+
T Consensus       341 ln~llt~dP~kR~tA~~~L~h~~F~e~P~p~~P~~~Pt~P~k~~  384 (419)
T KOG0663|consen  341 LNKLLTYDPGKRITAEDGLKHEYFRETPLPIDPSMFPTWPAKSE  384 (419)
T ss_pred             HHHHhccCccccccHHHhhcccccccCCCCCChhhcCCCccccc
Confidence            99999999999999999999999999999999999999987443


No 3  
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00  E-value=3.3e-40  Score=314.57  Aligned_cols=194  Identities=44%  Similarity=0.797  Sum_probs=169.9

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      |.|+|.||+|||.+.|+||||||.|+||+.+|.+||+|||+|+.+.+.. ...+..+.|.||+|||++.|...|+..+||
T Consensus       107 ~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~-~~~~~~V~TRWYRAPELLfGsr~Yg~~VDm  185 (318)
T KOG0659|consen  107 MLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPN-RIQTHQVVTRWYRAPELLFGSRQYGTGVDM  185 (318)
T ss_pred             HHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCC-cccccceeeeeccChHHhccchhcCCcchh
Confidence            4689999999999999999999999999999999999999999887654 344555899999999999999999999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhcc-CCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKS-KLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      ||+|||++||+.|.|.|+|.++.+|+..|+..+|.|.++.|+.. .++....+. +.|. ..+...|...+.++.|||.+
T Consensus       186 WavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~-~~P~-~~~~~lf~aas~d~ldLl~~  263 (318)
T KOG0659|consen  186 WAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQ-QFPK-PPLNNLFPAASSDALDLLSK  263 (318)
T ss_pred             hhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHh-cCCC-CccccccccccHHHHHHHHh
Confidence            99999999999999999999999999999999999999999874 455544433 1111 12334788899999999999


Q ss_pred             hcCCCCCCCcCHHHHHhcccccCCCCCCCCCCCCCCCC
Q 012191          160 LLSVEPYKRATASAALASEYFSTKPYACDLSSLPIYPP  197 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~Hp~F~~~p~~~~~~~~p~~~p  197 (468)
                      ||.+||.+|+|+.|+|+|+||++.|.+++++.+|....
T Consensus       264 m~~ynP~~Rita~qaL~~~yf~~~P~pt~~~~lp~p~~  301 (318)
T KOG0659|consen  264 MLTYNPKKRITASQALKHPYFKSLPLPTPPSKLPIPST  301 (318)
T ss_pred             hhccCchhcccHHHHhcchhhhcCCCCCChhhCcCCcc
Confidence            99999999999999999999999999999888776543


No 4  
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=2.9e-39  Score=319.73  Aligned_cols=188  Identities=39%  Similarity=0.675  Sum_probs=162.0

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCC-CCCCccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG-HRQPLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~-~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      |+|||.||.|+|+.||+||||||.|||++.++.+||||||+|+..... ....++.++.|.||+|||+++....|+.++|
T Consensus       131 ~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiD  210 (359)
T KOG0660|consen  131 LYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAID  210 (359)
T ss_pred             HHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhh
Confidence            589999999999999999999999999999999999999999877532 2345689999999999999999899999999


Q ss_pred             eeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCC--CCchhhhhcCCCcHHHHHHH
Q 012191           80 LWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQP--YDSSLRETFKDLPTTAVNLI  157 (468)
Q Consensus        80 IWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~s~~l~dLL  157 (468)
                      |||+||||+||++|++.|+|.+...|+..|...+|.|+++......-..+..+....+  -...+...|+..++.+.+||
T Consensus       211 iWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLl  290 (359)
T KOG0660|consen  211 IWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLL  290 (359)
T ss_pred             hhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHH
Confidence            9999999999999999999999999999999999999988776544333222222111  12346788899999999999


Q ss_pred             HHhcCCCCCCCcCHHHHHhcccccCCCCCCC
Q 012191          158 ETLLSVEPYKRATASAALASEYFSTKPYACD  188 (468)
Q Consensus       158 ~~mL~~DP~kRpTa~e~L~Hp~F~~~p~~~~  188 (468)
                      ++||.+||.+|+|++|+|.||||.....+.+
T Consensus       291 ekmL~fdP~kRita~eAL~hPYl~~~hdp~d  321 (359)
T KOG0660|consen  291 EKMLVFDPKKRITAEEALAHPYLAPYHDPED  321 (359)
T ss_pred             HHHhccCccccCCHHHHhcChhhhhhcCCcc
Confidence            9999999999999999999999998655543


No 5  
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=4.6e-39  Score=326.66  Aligned_cols=181  Identities=41%  Similarity=0.725  Sum_probs=166.8

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      |+||++||+|+|.+|+.||||||+|||+..+..|||+|||+|+.....  .++|.++.|.||+|||+|+....|+.++||
T Consensus       116 m~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Sk--pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~  193 (538)
T KOG0661|consen  116 MYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSK--PPYTEYVSTRWYRAPEVLLRSGYYSSPVDM  193 (538)
T ss_pred             HHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccC--CCcchhhhcccccchHHhhhccccCCchHH
Confidence            689999999999999999999999999999999999999999877643  688999999999999999999999999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhc-cCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKK-SKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |++|||++|+++-+|+|+|.++.+++.+|...+|.|..+.|.. ..+.....|....-....+..+++..+.++.+||.+
T Consensus       194 wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~  273 (538)
T KOG0661|consen  194 WAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIER  273 (538)
T ss_pred             HHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHH
Confidence            9999999999999999999999999999999999999999986 556666666655555667888888999999999999


Q ss_pred             hcCCCCCCCcCHHHHHhcccccCC
Q 012191          160 LLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      ||.|||.+||||.++|+||||+..
T Consensus       274 ll~WDP~kRpTA~~al~~pffq~~  297 (538)
T KOG0661|consen  274 LLAWDPDKRPTASQALQHPFFQVG  297 (538)
T ss_pred             HhcCCCccCccHHHHhcCcccccc
Confidence            999999999999999999999874


No 6  
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00  E-value=2.3e-38  Score=306.54  Aligned_cols=181  Identities=35%  Similarity=0.649  Sum_probs=156.7

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      ++|++.|+.|||+++||||||||+||||+.+|.+||||||+|+.+.. ....++.++.|.||+|||++.|...|+.++||
T Consensus       107 l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~-pgd~YTDYVATRWYRaPELLvGDtqYG~pVDi  185 (396)
T KOG0593|consen  107 LYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSA-PGDNYTDYVATRWYRAPELLVGDTQYGKPVDI  185 (396)
T ss_pred             HHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcC-CcchhhhhhhhhhccChhhhcccCcCCCcccc
Confidence            47999999999999999999999999999999999999999998773 33678899999999999999999999999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhc--cCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKK--SKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |++||++.||++|.+.|+|..+.+++..|.+.+|........-  ........-.|...-...+...++.++..+.||+.
T Consensus       186 WAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k  265 (396)
T KOG0593|consen  186 WAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLK  265 (396)
T ss_pred             hhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHH
Confidence            9999999999999999999999999999999999876442211  11111122234445556788899999999999999


Q ss_pred             HhcCCCCCCCcCHHHHHhcccccC
Q 012191          159 TLLSVEPYKRATASAALASEYFST  182 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~Hp~F~~  182 (468)
                      +||..||.+|++.+++|.|+||..
T Consensus       266 ~cL~~dP~~R~sc~qll~H~yFd~  289 (396)
T KOG0593|consen  266 KCLKMDPDDRLSCEQLLHHPYFDG  289 (396)
T ss_pred             HHhcCCccccccHHHHhcChHHHH
Confidence            999999999999999999999943


No 7  
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00  E-value=1.4e-37  Score=307.86  Aligned_cols=185  Identities=45%  Similarity=0.806  Sum_probs=160.3

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      |+||+.||+|||+++|+||||||.||||+.+|.+||+|||+|..+.-.. ..++..++|.||+|||+++|...|+..+||
T Consensus       126 m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~-~~yt~evvTlWYRaPEvLlGs~~Ys~~vDi  204 (323)
T KOG0594|consen  126 MRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPM-RTYTPEVVTLWYRAPEVLLGSTSYSTSVDI  204 (323)
T ss_pred             HHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCc-ccccccEEEeeccCHHHhcCCCcCCCCcch
Confidence            6899999999999999999999999999999999999999998665332 346788999999999999999899999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhcc-CCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKS-KLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      ||+|||++||+++++.|+|..+.+++..|+..+|.|.+..|+.. .++.....-+...-...+...++...++..+|+.+
T Consensus       205 Ws~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~  284 (323)
T KOG0594|consen  205 WSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSK  284 (323)
T ss_pred             HhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHH
Confidence            99999999999999999999999999999999999999999873 34433322222222345566667777899999999


Q ss_pred             hcCCCCCCCcCHHHHHhcccccCCCCC
Q 012191          160 LLSVEPYKRATASAALASEYFSTKPYA  186 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~Hp~F~~~p~~  186 (468)
                      ||+++|.+|+||..+|.||||...+..
T Consensus       285 ~L~y~p~~R~Sa~~al~h~yf~~~~~~  311 (323)
T KOG0594|consen  285 LLQYDPAKRISAKGALTHPYFSELPEK  311 (323)
T ss_pred             HhccCcccCcCHHHHhcChhhcccccc
Confidence            999999999999999999999986543


No 8  
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00  E-value=2.3e-36  Score=299.57  Aligned_cols=182  Identities=42%  Similarity=0.686  Sum_probs=156.1

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCC-CcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNE-GVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~-g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      ++||++||.|||+.||+||||||.|||+|.+ |.+||||||.|+....+  .+..++..|..|+|||++.|...|+.++|
T Consensus       131 t~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~--epniSYicSRyYRaPELifga~~Yt~~ID  208 (364)
T KOG0658|consen  131 TYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKG--EPNISYICSRYYRAPELIFGATEYTTSID  208 (364)
T ss_pred             HHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeeccC--CCceeEEEeccccCHHHHcCccccCceeE
Confidence            4799999999999999999999999999987 89999999999988766  44578889999999999999999999999


Q ss_pred             eeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           80 LWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        80 IWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||.|||++||+.|++.|+|.+..+|+..|++.+|.|..+....++.......-++..-.....-.....++++.+|+.+
T Consensus       209 iWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~  288 (364)
T KOG0658|consen  209 IWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSK  288 (364)
T ss_pred             EhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHH
Confidence            99999999999999999999999999999999999999887766554432222222211111122456789999999999


Q ss_pred             hcCCCCCCCcCHHHHHhcccccCCC
Q 012191          160 LLSVEPYKRATASAALASEYFSTKP  184 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~Hp~F~~~p  184 (468)
                      +|.++|.+|.|+.|+|.||||....
T Consensus       289 ~L~Y~P~~R~~~~~~l~h~fFdelr  313 (364)
T KOG0658|consen  289 LLQYSPSKRLSALEALAHPFFDELR  313 (364)
T ss_pred             HhccChhhcCCHHHHhcchhhHHhh
Confidence            9999999999999999999998753


No 9  
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=3.3e-36  Score=301.55  Aligned_cols=158  Identities=34%  Similarity=0.532  Sum_probs=132.0

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCC---CcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCC--CCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNE---GVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGA--TDYG   75 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~---g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~--~~~s   75 (468)
                      ++|||.||.|||++||+||||||+|||++.+   ..+||+|||+|++.+..  ..+...|||+.|.|||++.+.  ..|.
T Consensus       282 f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~--sfm~TlCGTpsYvAPEVl~~kg~~~~~  359 (475)
T KOG0615|consen  282 FKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEG--SFMKTLCGTPSYVAPEVLASKGVEYYP  359 (475)
T ss_pred             HHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccccc--eehhhhcCCccccChhheecCCeeccc
Confidence            5899999999999999999999999999876   67999999999988643  567889999999999999643  3455


Q ss_pred             CCcceeeeehhhhhhhhcCCCCCCCchHH-HHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHH
Q 012191           76 PSVDLWSVGCVFAELLIGKPILQGRTEVE-QLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAV  154 (468)
Q Consensus        76 ~~sDIWSLG~ILyeLltG~~pf~g~~~~e-~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~  154 (468)
                      .++||||+|||||.+|+|.+||.+..... ...+|.+.-...-.                         ..|..++++++
T Consensus       360 ~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p-------------------------~~w~~Iseea~  414 (475)
T KOG0615|consen  360 SKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGP-------------------------LQWDRISEEAL  414 (475)
T ss_pred             chheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccC-------------------------hhhhhhhHHHH
Confidence            68999999999999999999998765544 55555442222211                         23457899999


Q ss_pred             HHHHHhcCCCCCCCcCHHHHHhcccccCCCC
Q 012191          155 NLIETLLSVEPYKRATASAALASEYFSTKPY  185 (468)
Q Consensus       155 dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~p~  185 (468)
                      +||.+||.+||++|||+.|+|+||||+..|.
T Consensus       415 dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~  445 (475)
T KOG0615|consen  415 DLINWMLVVDPENRPSADEALNHPWFKDAPC  445 (475)
T ss_pred             HHHHHhhEeCcccCcCHHHHhcChhhhcccc
Confidence            9999999999999999999999999997654


No 10 
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00  E-value=8.8e-35  Score=274.65  Aligned_cols=180  Identities=32%  Similarity=0.511  Sum_probs=148.6

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCC---CcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNE---GVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPS   77 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~---g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~   77 (468)
                      |+|||.||.|||.+||||||+||+|+|+...   .-+||+|||+|.....+  .....++|||.|+|||++.. ..|+..
T Consensus       116 ~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g--~~~~G~~GtP~fmaPEvvrk-dpy~kp  192 (355)
T KOG0033|consen  116 IQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDG--EAWHGFAGTPGYLSPEVLKK-DPYSKP  192 (355)
T ss_pred             HHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCc--cccccccCCCcccCHHHhhc-CCCCCc
Confidence            5899999999999999999999999999543   35999999999877733  55678899999999999976 579999


Q ss_pred             cceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHH
Q 012191           78 VDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLI  157 (468)
Q Consensus        78 sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL  157 (468)
                      +|||+.|+|||.||.|.+||.+.+....++.|++.-...+..+|                         +.+++++++||
T Consensus       193 vDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w-------------------------~~is~~Ak~Lv  247 (355)
T KOG0033|consen  193 VDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEW-------------------------DTVTPEAKSLI  247 (355)
T ss_pred             chhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCccc-------------------------CcCCHHHHHHH
Confidence            99999999999999999999999999999999875544444333                         57899999999


Q ss_pred             HHhcCCCCCCCcCHHHHHhcccccCCCCCCCCCCCCCCCCChhHHHhhHHHHHHhh
Q 012191          158 ETLLSVEPYKRATASAALASEYFSTKPYACDLSSLPIYPPSKEIDAKHREDARRKK  213 (468)
Q Consensus       158 ~~mL~~DP~kRpTa~e~L~Hp~F~~~p~~~~~~~~p~~~p~~e~~~k~~~~~~r~~  213 (468)
                      ++||..||.+|+|+.|+|+|||+.+..--.     -...-+..++...+.+++|+-
T Consensus       248 rrML~~dP~kRIta~EAL~HpWi~~r~~~A-----s~~H~~dtvd~lrkfNarRKL  298 (355)
T KOG0033|consen  248 RRMLTVNPKKRITADEALKHPWICNRERVA-----SAIHRQDTVDCLKKFNARRKL  298 (355)
T ss_pred             HHHhccChhhhccHHHHhCCchhcchHHHH-----HHhhhHHHHHHHHHhhHHHHH
Confidence            999999999999999999999998742110     112334456666666766653


No 11 
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=4.4e-34  Score=298.20  Aligned_cols=152  Identities=34%  Similarity=0.515  Sum_probs=135.3

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      |+||+.||.|||+++|+|||||..|||++++.+|||+|||+|..+.... ......||||.|+|||++.+ ...+..+||
T Consensus       124 l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~-Erk~TlCGTPNYIAPEVl~k-~gHsfEvDi  201 (592)
T KOG0575|consen  124 LRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG-ERKKTLCGTPNYIAPEVLNK-SGHSFEVDI  201 (592)
T ss_pred             HHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcc-cccceecCCCcccChhHhcc-CCCCCchhh
Confidence            5899999999999999999999999999999999999999999887543 33456799999999999985 568999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||+|||||.||+|+|||...+-.+.+.+|...-...|                             ..++.++++||.+|
T Consensus       202 WSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P-----------------------------~~ls~~A~dLI~~l  252 (592)
T KOG0575|consen  202 WSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMP-----------------------------SHLSAEAKDLIRKL  252 (592)
T ss_pred             hhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccc-----------------------------cccCHHHHHHHHHH
Confidence            9999999999999999999999999999865432222                             26889999999999


Q ss_pred             cCCCCCCCcCHHHHHhcccccCC
Q 012191          161 LSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      |..||.+|||++++|.|+||++.
T Consensus       253 L~~~P~~Rpsl~~vL~h~Ff~~g  275 (592)
T KOG0575|consen  253 LRPNPSERPSLDEVLDHPFFKSG  275 (592)
T ss_pred             hcCCcccCCCHHHHhcCHhhhCC
Confidence            99999999999999999999553


No 12 
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00  E-value=3.6e-34  Score=278.13  Aligned_cols=186  Identities=43%  Similarity=0.781  Sum_probs=151.7

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCC----CcEEEEecCCccccCCCCCC--CccccccCCcccChhhhcCCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNE----GVLKLADFGLANFSNTGHRQ--PLTSRVVTLWYRPPELLLGATDY   74 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~----g~vKL~DFGla~~~~~~~~~--~~~~~~gt~~Y~APE~l~g~~~~   74 (468)
                      |+|||.||.|||++-|+||||||.|||+..+    |.|||+|||+++.+...-..  .....+.|.||+|||+++|...|
T Consensus       138 lwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hY  217 (438)
T KOG0666|consen  138 LWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHY  217 (438)
T ss_pred             HHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccc
Confidence            5799999999999999999999999999877    89999999999987754332  23456789999999999999999


Q ss_pred             CCCcceeeeehhhhhhhhcCCCCCCCc---------hHHHHHHHHHHcCCCCchhhhcc-CCCcc-ccCC-CC-CCCCc-
Q 012191           75 GPSVDLWSVGCVFAELLIGKPILQGRT---------EVEQLHKIFKLCGSPPDDYWKKS-KLPHA-TLFK-PQ-QPYDS-  140 (468)
Q Consensus        75 s~~sDIWSLG~ILyeLltG~~pf~g~~---------~~e~l~~i~~~~g~p~~~~~~~~-~~~~~-~~~~-~~-~~~~~-  140 (468)
                      +.++|||++|||+.|||+-.|+|.|..         ..+++.+|++++|.|.+..|+.. +.|+. .... .. ..+.. 
T Consensus       218 T~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~  297 (438)
T KOG0666|consen  218 TKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNV  297 (438)
T ss_pred             cchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcc
Confidence            999999999999999999999998753         36789999999999999999874 34443 1111 01 11111 


Q ss_pred             hh---hhhcCCCcHHHHHHHHHhcCCCCCCCcCHHHHHhcccccCCCCC
Q 012191          141 SL---RETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYA  186 (468)
Q Consensus       141 ~l---~~~~~~~s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~p~~  186 (468)
                      +|   ....+.-++.+.+||.+||++||.+|+|++++|+|+||+..+.+
T Consensus       298 sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~lp  346 (438)
T KOG0666|consen  298 SLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDPLP  346 (438)
T ss_pred             hHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCCCC
Confidence            12   22334456669999999999999999999999999999998665


No 13 
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00  E-value=5.7e-34  Score=272.64  Aligned_cols=157  Identities=33%  Similarity=0.496  Sum_probs=139.9

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcC-----CCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLG-----ATDYG   75 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g-----~~~~s   75 (468)
                      |+||+.|++|||.++||||||||+|||++++..++|+|||+++.+.++  ..+...|||+.|+|||.+..     ...|+
T Consensus       129 MrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~G--ekLrelCGTPgYLAPEtikC~m~e~~pGYs  206 (411)
T KOG0599|consen  129 MRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPG--EKLRELCGTPGYLAPETIKCSMYENHPGYS  206 (411)
T ss_pred             HHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCCc--hhHHHhcCCCcccChhheeeecccCCCCcc
Confidence            789999999999999999999999999999999999999999988776  46788899999999999853     45689


Q ss_pred             CCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHH
Q 012191           76 PSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVN  155 (468)
Q Consensus        76 ~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~d  155 (468)
                      ..+|+|++|+|+|.||.|.+||..+...-.+..|+..-.....+.                         |.+++...+|
T Consensus       207 ~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~spe-------------------------Wadis~~~Kd  261 (411)
T KOG0599|consen  207 KEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPE-------------------------WADISATVKD  261 (411)
T ss_pred             chhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcc-------------------------hhhccccHHH
Confidence            999999999999999999999999888888888877544443333                         4688999999


Q ss_pred             HHHHhcCCCCCCCcCHHHHHhcccccCCC
Q 012191          156 LIETLLSVEPYKRATASAALASEYFSTKP  184 (468)
Q Consensus       156 LL~~mL~~DP~kRpTa~e~L~Hp~F~~~p  184 (468)
                      ||.+||+.||.+|+|+.|+|.||||....
T Consensus       262 LIsrlLqVdp~~Ritake~LaHpff~q~~  290 (411)
T KOG0599|consen  262 LISRLLQVDPTKRITAKEALAHPFFIQIA  290 (411)
T ss_pred             HHHHHHeeCchhcccHHHHhcChHHHHHH
Confidence            99999999999999999999999997643


No 14 
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00  E-value=3.4e-33  Score=287.80  Aligned_cols=156  Identities=34%  Similarity=0.582  Sum_probs=138.1

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC------------CccccccCCcccChhhhc
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ------------PLTSRVVTLWYRPPELLL   69 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~------------~~~~~~gt~~Y~APE~l~   69 (468)
                      -||+.||+|||++|||||||||+||||+.++.++|+|||.|..+.+....            ...+.+||..|.+||+|.
T Consensus       181 AeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~  260 (604)
T KOG0592|consen  181 AEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLN  260 (604)
T ss_pred             HHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhc
Confidence            48999999999999999999999999999999999999999876643221            114579999999999997


Q ss_pred             CCCCCCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCC
Q 012191           70 GATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDL  149 (468)
Q Consensus        70 g~~~~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  149 (468)
                      . ...+..+|||+||||||.|+.|.|||.+.++.-.+++|+++....+                             +.+
T Consensus       261 ~-~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp-----------------------------~~f  310 (604)
T KOG0592|consen  261 D-SPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFP-----------------------------EGF  310 (604)
T ss_pred             C-CCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCC-----------------------------CCC
Confidence            6 4678999999999999999999999999999999999998765444                             357


Q ss_pred             cHHHHHHHHHhcCCCCCCCcCHHHHHhcccccCCCCCC
Q 012191          150 PTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYAC  187 (468)
Q Consensus       150 s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~p~~~  187 (468)
                      ++.+.+||.++|..||.+|+|+.+|-+||||....|..
T Consensus       311 p~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vdw~n  348 (604)
T KOG0592|consen  311 PEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVDWEN  348 (604)
T ss_pred             CHHHHHHHHHHHccCccccccHHHHhhCcccccCChhh
Confidence            89999999999999999999999999999999876653


No 15 
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=2.6e-33  Score=265.60  Aligned_cols=185  Identities=43%  Similarity=0.810  Sum_probs=153.7

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCC---CCCCccccccCCcccChhhhcCCCCCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG---HRQPLTSRVVTLWYRPPELLLGATDYGPS   77 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~---~~~~~~~~~gt~~Y~APE~l~g~~~~s~~   77 (468)
                      |++|+.||.|+|...|+|||+|+.|+||+.+|.+||+|||+++.+...   ....++.++.|+||++||+++|...|+++
T Consensus       130 Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~  209 (376)
T KOG0669|consen  130 MKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPP  209 (376)
T ss_pred             HHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCc
Confidence            678999999999999999999999999999999999999999755432   23346788999999999999999999999


Q ss_pred             cceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccC-CCccccC--CC--CCCCCchhhhhcC--CCc
Q 012191           78 VDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSK-LPHATLF--KP--QQPYDSSLRETFK--DLP  150 (468)
Q Consensus        78 sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~-~~~~~~~--~~--~~~~~~~l~~~~~--~~s  150 (468)
                      .|||..|||+.||+++.++|+|+++..+++.|..+||....+.|+... ++.....  .|  ...+ +.+....+  .-.
T Consensus       210 iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~-rkv~n~~kp~~kd  288 (376)
T KOG0669|consen  210 IDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQK-RKVKNRLKPYVKD  288 (376)
T ss_pred             chhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchh-hhhhhhcccccCC
Confidence            999999999999999999999999999999999999999999998743 3222111  11  1111 11222222  125


Q ss_pred             HHHHHHHHHhcCCCCCCCcCHHHHHhcccccCCCCC
Q 012191          151 TTAVNLIETLLSVEPYKRATASAALASEYFSTKPYA  186 (468)
Q Consensus       151 ~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~p~~  186 (468)
                      +++.+||++||.+||.+|++++++|+|.||...|.+
T Consensus       289 ~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp~p  324 (376)
T KOG0669|consen  289 DEALDLLEKLLKLDPTKRIDADQALNHDFFWKDPMP  324 (376)
T ss_pred             hhHHHHHHHHhccCcccCcchHhhhchhhhhcCCcc
Confidence            679999999999999999999999999999987765


No 16 
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00  E-value=6.9e-33  Score=291.74  Aligned_cols=181  Identities=28%  Similarity=0.568  Sum_probs=143.9

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCC--cEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcc
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEG--VLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g--~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +|||.||.+||+.||||+||||+||||...+  .|||+|||.+++....    ...++.+..|+|||+++| ..|+.++|
T Consensus       296 ~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~----vytYiQSRfYRAPEVILG-lpY~~~ID  370 (586)
T KOG0667|consen  296 QQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQR----VYTYIQSRFYRAPEVILG-LPYDTAID  370 (586)
T ss_pred             HHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCc----ceeeeeccccccchhhcc-CCCCCccc
Confidence            7999999999999999999999999997554  6999999999876642    337788999999999999 57999999


Q ss_pred             eeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCC--------------------------
Q 012191           80 LWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFK--------------------------  133 (468)
Q Consensus        80 IWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~--------------------------  133 (468)
                      |||||||++||++|.|+|+|.++.+++..|++.+|.|+..+....+-.+..+-.                          
T Consensus       371 mWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~  450 (586)
T KOG0667|consen  371 MWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYY  450 (586)
T ss_pred             eeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhh
Confidence            999999999999999999999999999999999999987754432211100000                          


Q ss_pred             ------CCCC-CCchhhhhcC-CCcHHHHHHHHHhcCCCCCCCcCHHHHHhcccccCCCCCC
Q 012191          134 ------PQQP-YDSSLRETFK-DLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYAC  187 (468)
Q Consensus       134 ------~~~~-~~~~l~~~~~-~~s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~p~~~  187 (468)
                            ...+ -...+...+. .-...+.|||.+||.+||.+|+|+.++|+||||+......
T Consensus       451 ~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~~~~~  512 (586)
T KOG0667|consen  451 RKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGTSLER  512 (586)
T ss_pred             hhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCcccccccccc
Confidence                  0011 1122222222 2335579999999999999999999999999999765543


No 17 
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.98  E-value=9.2e-33  Score=250.75  Aligned_cols=180  Identities=47%  Similarity=0.832  Sum_probs=157.6

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      |.|++.||.|||+++++||||||.|+||+.+|.+||+|||+++.++-.. ..+...+.|+||++|.++.|..-|+.+.|+
T Consensus       107 mlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipv-rcysaevvtlwyrppdvlfgakly~tsidm  185 (292)
T KOG0662|consen  107 MLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV-RCYSAEVVTLWYRPPDVLFGAKLYSTSIDM  185 (292)
T ss_pred             HHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCce-EeeeceeeeeeccCcceeeeeehhccchHh
Confidence            5799999999999999999999999999999999999999998776532 233455789999999999999999999999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhcc-CCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKS-KLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      ||.|||+.|+.. |.|.|+|.+..+++.+|+..+|.|.++.|+.. +++....+ |..+...++....+.+...-++|++
T Consensus       186 wsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~y-p~ypattswsqivp~lns~grdllq  264 (292)
T KOG0662|consen  186 WSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPY-PIYPATTSWSQIVPKLNSTGRDLLQ  264 (292)
T ss_pred             hhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCccc-CCccccchHHHHhhhhcchhHHHHH
Confidence            999999999986 89999999999999999999999999999864 44433222 3334445667777888999999999


Q ss_pred             HhcCCCCCCCcCHHHHHhcccccC
Q 012191          159 TLLSVEPYKRATASAALASEYFST  182 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~Hp~F~~  182 (468)
                      ++|.-+|..|++|+++|+||||..
T Consensus       265 kll~cnp~qrisaeaalqhpyf~d  288 (292)
T KOG0662|consen  265 KLLKCNPAQRISAEAALQHPYFSD  288 (292)
T ss_pred             HHhccCcccccCHHHHhcCccccc
Confidence            999999999999999999999986


No 18 
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.97  E-value=2.6e-32  Score=270.47  Aligned_cols=178  Identities=43%  Similarity=0.797  Sum_probs=145.0

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||+|||++||+||||||+|||++.++.+||+|||++....... .......+++.|+|||++.+...++.++||
T Consensus       109 ~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di  187 (288)
T cd07871         109 MFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPT-KTYSNEVVTLWYRPPDVLLGSTEYSTPIDM  187 (288)
T ss_pred             HHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCC-ccccCceecccccChHHhcCCcccCcHHHH
Confidence            3699999999999999999999999999999999999999987543221 223445779999999999876678999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCc--cccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH--ATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      ||+||++|+|++|.+||.+.+..+.+..+....+.++.+.|+......  .....+... ...+......++.++++||.
T Consensus       188 wslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~dll~  266 (288)
T cd07871         188 WGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYR-AQPLINHAPRLDTDGIDLLS  266 (288)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccC-CCchHHhCCCCCHHHHHHHH
Confidence            999999999999999999999999999999999999998887633211  111111111 11222344568899999999


Q ss_pred             HhcCCCCCCCcCHHHHHhcccc
Q 012191          159 TLLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      +||++||.+|||+.|+|+||||
T Consensus       267 ~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         267 SLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             HhcCcCcccCCCHHHHhcCCCC
Confidence            9999999999999999999998


No 19 
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.97  E-value=3.1e-32  Score=270.77  Aligned_cols=152  Identities=32%  Similarity=0.500  Sum_probs=128.1

Q ss_pred             HHHHHHHHHHHh-CCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHS-RGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs-~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +|||+||.|||+ ++||||||||+|||++..|.|||||||.+......   ...+.+||..|||||.+.+ ..|+.++||
T Consensus       185 ~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS---~a~tfvGT~~YMsPERi~g-~~Ys~~sDI  260 (364)
T KOG0581|consen  185 RAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS---IANTFVGTSAYMSPERISG-ESYSVKSDI  260 (364)
T ss_pred             HHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh---hcccccccccccChhhhcC-CcCCcccce
Confidence            689999999996 99999999999999999999999999999766543   5578899999999999988 579999999


Q ss_pred             eeeehhhhhhhhcCCCCCCC-----chHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGR-----TEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVN  155 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~-----~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~d  155 (468)
                      ||||++++||.+|+.||...     ...+++..|   +..++...                |      .  ..+++++++
T Consensus       261 WSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~I---v~~ppP~l----------------P------~--~~fS~ef~~  313 (364)
T KOG0581|consen  261 WSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAI---VDEPPPRL----------------P------E--GEFSPEFRS  313 (364)
T ss_pred             ecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHH---hcCCCCCC----------------C------c--ccCCHHHHH
Confidence            99999999999999999774     334444444   33222211                0      0  148999999


Q ss_pred             HHHHhcCCCCCCCcCHHHHHhcccccCCC
Q 012191          156 LIETLLSVEPYKRATASAALASEYFSTKP  184 (468)
Q Consensus       156 LL~~mL~~DP~kRpTa~e~L~Hp~F~~~p  184 (468)
                      ||..||+.||.+|+|+.|+|+|||++...
T Consensus       314 FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~  342 (364)
T KOG0581|consen  314 FVSCCLRKDPSERPSAKQLLQHPFIKKFE  342 (364)
T ss_pred             HHHHHhcCCcccCCCHHHHhcCHHHhhcc
Confidence            99999999999999999999999998754


No 20 
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.97  E-value=1.3e-31  Score=264.39  Aligned_cols=175  Identities=42%  Similarity=0.749  Sum_probs=142.8

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+||||||+|||++.++.+||+|||++......  .......+|+.|+|||++.+ ..++.++||
T Consensus       116 ~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di  192 (290)
T cd07862         116 MFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ--MALTSVVVTLWYRAPEVLLQ-SSYATPVDL  192 (290)
T ss_pred             HHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEeccCC--cccccccccccccChHHHhC-CCCCCccch
Confidence            369999999999999999999999999999999999999999765433  23345578999999999876 468899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|.+||.+.+..+.+..+...++.+....|+.........+....  ...+....+.++..+.+||.+|
T Consensus       193 wslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~  270 (290)
T cd07862         193 WSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKS--AQPIEKFVTDIDELGKDLLLKC  270 (290)
T ss_pred             HHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCC--CCCHHHHccCCCHHHHHHHHHH
Confidence            99999999999999999999999999999998888776666542211111111111  1233445567899999999999


Q ss_pred             cCCCCCCCcCHHHHHhcccc
Q 012191          161 LSVEPYKRATASAALASEYF  180 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F  180 (468)
                      |+.||.+|||+.++|+||||
T Consensus       271 l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         271 LTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             hccCchhcCCHHHHhcCCCC
Confidence            99999999999999999998


No 21 
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97  E-value=1.4e-31  Score=275.94  Aligned_cols=152  Identities=34%  Similarity=0.528  Sum_probs=133.0

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCC-CcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCC-CCCCCc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNE-GVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGAT-DYGPSV   78 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~-g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~-~~s~~s   78 (468)
                      |+||+.||+|||++||+||||||+|||++.+ +.+||+|||++.... .....+...+||+.|+|||++.+.. .-+.++
T Consensus       126 F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~a  204 (370)
T KOG0583|consen  126 FRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAA  204 (370)
T ss_pred             HHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchh
Confidence            6899999999999999999999999999999 999999999998774 2335677889999999999998865 446899


Q ss_pred             ceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCC-cHHHHHHH
Q 012191           79 DLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDL-PTTAVNLI  157 (468)
Q Consensus        79 DIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-s~~l~dLL  157 (468)
                      ||||+|||||.|++|..||...+....+.+|.+.....+                             ..+ ++++.+||
T Consensus       205 DvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p-----------------------------~~~~S~~~~~Li  255 (370)
T KOG0583|consen  205 DVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIP-----------------------------SYLLSPEARSLI  255 (370)
T ss_pred             hhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCC-----------------------------CCcCCHHHHHHH
Confidence            999999999999999999999888888887655322211                             124 89999999


Q ss_pred             HHhcCCCCCCCcCHHHHHhcccccC
Q 012191          158 ETLLSVEPYKRATASAALASEYFST  182 (468)
Q Consensus       158 ~~mL~~DP~kRpTa~e~L~Hp~F~~  182 (468)
                      .+||..||.+|+|+.+++.||||+.
T Consensus       256 ~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  256 EKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             HHHcCCCcccCCCHHHHhhChhhcc
Confidence            9999999999999999999999997


No 22 
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.97  E-value=9.5e-32  Score=283.67  Aligned_cols=181  Identities=38%  Similarity=0.647  Sum_probs=143.8

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCC-cEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEG-VLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g-~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.||.|||++||+||||||+|||++.++ .+||+|||++......  ......++|+.|+|||++.+...|+.++||
T Consensus       177 ~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di  254 (440)
T PTZ00036        177 YQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAG--QRSVSYICSRFYRAPELMLGATNYTTHIDL  254 (440)
T ss_pred             HHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccchhccCC--CCcccCCCCcCccCHHHhcCCCCCCcHHHH
Confidence            5999999999999999999999999998665 7999999999765433  223456789999999999876678999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcC-CCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFK-DLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~s~~l~dLL~~  159 (468)
                      ||||||+|+|++|.+||.+.+..+++..+...++.+..+.+............+. .....+...++ ..+.++++||.+
T Consensus       255 wSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~p~~~~~~~~~li~~  333 (440)
T PTZ00036        255 WSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPD-VKPKDLKKVFPKGTPDDAINFISQ  333 (440)
T ss_pred             HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCc-cCchhHHHHhccCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999887766543321111100011 01112222232 478899999999


Q ss_pred             hcCCCCCCCcCHHHHHhcccccCCCC
Q 012191          160 LLSVEPYKRATASAALASEYFSTKPY  185 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~Hp~F~~~p~  185 (468)
                      ||.+||.+|||+.++|.||||.....
T Consensus       334 ~L~~dP~~R~ta~e~l~hp~f~~~~~  359 (440)
T PTZ00036        334 FLKYEPLKRLNPIEALADPFFDDLRD  359 (440)
T ss_pred             HCCCChhHCcCHHHHhCChhHHhhhc
Confidence            99999999999999999999987543


No 23 
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97  E-value=1.4e-31  Score=280.76  Aligned_cols=155  Identities=29%  Similarity=0.495  Sum_probs=137.6

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      |+||+.||.|||..+|+||||||+|+|++..+.|||+|||+|....++  ..+...||.+.|.+||++.|..+.+.++||
T Consensus       118 f~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g--klLeTSCGSPHYA~PEIV~G~pYdG~~sDV  195 (786)
T KOG0588|consen  118 FRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPG--KLLETSCGSPHYAAPEIVSGRPYDGRPSDV  195 (786)
T ss_pred             HHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCC--ccccccCCCcccCCchhhcCCCCCCCcccc
Confidence            589999999999999999999999999999999999999999866554  456778999999999999998878999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||+|||||.||+|..||.+++-...+.++.......|                             ..++.++++||.+|
T Consensus       196 WSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MP-----------------------------s~Is~eaQdLLr~m  246 (786)
T KOG0588|consen  196 WSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMP-----------------------------SNISSEAQDLLRRM  246 (786)
T ss_pred             chhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCC-----------------------------CcCCHHHHHHHHHH
Confidence            9999999999999999998888888887755332222                             46899999999999


Q ss_pred             cCCCCCCCcCHHHHHhcccccCCCCC
Q 012191          161 LSVEPYKRATASAALASEYFSTKPYA  186 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F~~~p~~  186 (468)
                      |.+||.+|+|.++++.|||+....-+
T Consensus       247 l~VDp~~RiT~~eI~kHP~l~g~~~~  272 (786)
T KOG0588|consen  247 LDVDPSTRITTEEILKHPFLSGYTSL  272 (786)
T ss_pred             hccCccccccHHHHhhCchhhcCCCC
Confidence            99999999999999999999876543


No 24 
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.97  E-value=3.7e-31  Score=264.34  Aligned_cols=195  Identities=45%  Similarity=0.793  Sum_probs=158.5

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.||+|+||||+||+++.++.+||+|||++....... .......++..|+|||.+.+...++.++||
T Consensus       114 ~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv  192 (309)
T cd07845         114 MLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA-KPMTPKVVTLWYRAPELLLGCTTYTTAIDM  192 (309)
T ss_pred             HHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCcc-CCCCcccccccccChhhhcCCCCcCchHHH
Confidence            4699999999999999999999999999999999999999987665332 223344568889999998776678899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCC-CccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKL-PHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++|.+||.+.+..+.+..+...++.+....|+.... +....+.........+...+..+++.+.+||.+
T Consensus       193 wslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  272 (309)
T cd07845         193 WAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNF  272 (309)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHH
Confidence            9999999999999999999999999999999999888887765322 222222111111123344455678999999999


Q ss_pred             hcCCCCCCCcCHHHHHhcccccCCCCCCCCCCCCCCC
Q 012191          160 LLSVEPYKRATASAALASEYFSTKPYACDLSSLPIYP  196 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~Hp~F~~~p~~~~~~~~p~~~  196 (468)
                      ||++||.+|||+.++|.||||...+.+|.+..+|.+|
T Consensus       273 ml~~dp~~R~t~~~il~h~~f~~~~~~~~~~~~~~~~  309 (309)
T cd07845         273 LLMYDPKKRATAEEALESSYFKEKPLPCEPEMMPTFP  309 (309)
T ss_pred             HhcCChhhCcCHHHHhcChhhccCCCCCCCCcCCCCC
Confidence            9999999999999999999999999999887777664


No 25 
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes 
Probab=99.97  E-value=4.8e-31  Score=259.95  Aligned_cols=179  Identities=37%  Similarity=0.648  Sum_probs=139.2

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.||+|+||||+|||++.++.+||+|||++...............+++.|+|||++.+ ..++.++||
T Consensus       106 ~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di  184 (287)
T cd07848         106 IYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLG-APYGKAVDM  184 (287)
T ss_pred             HHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccccccccccCCcHHHcC-CCCCCchhH
Confidence            4799999999999999999999999999999999999999997665433333345578999999999976 458899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCC---ccccCCCCCCCCchhhhhcCCCcHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLP---HATLFKPQQPYDSSLRETFKDLPTTAVNLI  157 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL  157 (468)
                      |||||++|+|++|.+||.+.+..+.+..+....+..+.+.+......   ....+................++.++.+||
T Consensus       185 wslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll  264 (287)
T cd07848         185 WSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLM  264 (287)
T ss_pred             HhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHH
Confidence            99999999999999999998888888888887777766554421110   000000000001111222345789999999


Q ss_pred             HHhcCCCCCCCcCHHHHHhcccc
Q 012191          158 ETLLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       158 ~~mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      .+||++||.+|||+.++|+||||
T Consensus       265 ~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         265 KNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             HHHccCCcccCCCHHHHhcCCCC
Confidence            99999999999999999999998


No 26 
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.97  E-value=1.7e-31  Score=265.43  Aligned_cols=155  Identities=30%  Similarity=0.482  Sum_probs=133.5

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      -+|+.||.|||+.|||||||||+|||++.+|.++|+|||++....... ......+||+.|||||++.+. .|+.++|.|
T Consensus       132 aEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~-~~t~tfcGT~eYmAPEil~~~-gy~~~vDWW  209 (357)
T KOG0598|consen  132 AEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDG-DATRTFCGTPEYMAPEILLGK-GYDKAVDWW  209 (357)
T ss_pred             HHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCC-CccccccCCccccChHHHhcC-CCCcccchH
Confidence            479999999999999999999999999999999999999997543322 334457999999999999984 799999999


Q ss_pred             eeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhc
Q 012191           82 SVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLL  161 (468)
Q Consensus        82 SLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL  161 (468)
                      ||||++|+||+|.+||.+.+......+|.+.-...+.                            ..++.++++||.++|
T Consensus       210 sLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p----------------------------~~ls~~ardll~~LL  261 (357)
T KOG0598|consen  210 SLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPP----------------------------GYLSEEARDLLKKLL  261 (357)
T ss_pred             hHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCC----------------------------ccCCHHHHHHHHHHh
Confidence            9999999999999999999999988888663211111                            237899999999999


Q ss_pred             CCCCCCCc----CHHHHHhcccccCCCCC
Q 012191          162 SVEPYKRA----TASAALASEYFSTKPYA  186 (468)
Q Consensus       162 ~~DP~kRp----Ta~e~L~Hp~F~~~p~~  186 (468)
                      ..||.+|.    .+.++-.||||....|.
T Consensus       262 ~rdp~~RLg~~~d~~~ik~HpfF~~inW~  290 (357)
T KOG0598|consen  262 KRDPRQRLGGPGDAEEIKRHPFFKGINWE  290 (357)
T ss_pred             ccCHHHhcCCCCChHHhhcCcccccCCHH
Confidence            99999995    68999999999988774


No 27 
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.97  E-value=3.9e-31  Score=264.83  Aligned_cols=180  Identities=39%  Similarity=0.735  Sum_probs=136.7

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEE----CCCCcEEEEecCCccccCCCCC--CCccccccCCcccChhhhcCCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLV----NNEGVLKLADFGLANFSNTGHR--QPLTSRVVTLWYRPPELLLGATDY   74 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILl----d~~g~vKL~DFGla~~~~~~~~--~~~~~~~gt~~Y~APE~l~g~~~~   74 (468)
                      +.||+.||.|||++||+||||||+|||+    +..+.+||+|||++........  .......+|+.|+|||++.+...+
T Consensus       114 ~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~  193 (317)
T cd07868         114 LYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHY  193 (317)
T ss_pred             HHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCc
Confidence            4799999999999999999999999999    4557899999999976653321  123456789999999999876678


Q ss_pred             CCCcceeeeehhhhhhhhcCCCCCCCch---------HHHHHHHHHHcCCCCchhhhccCC-Ccccc----CC----CCC
Q 012191           75 GPSVDLWSVGCVFAELLIGKPILQGRTE---------VEQLHKIFKLCGSPPDDYWKKSKL-PHATL----FK----PQQ  136 (468)
Q Consensus        75 s~~sDIWSLG~ILyeLltG~~pf~g~~~---------~e~l~~i~~~~g~p~~~~~~~~~~-~~~~~----~~----~~~  136 (468)
                      +.++||||+||++|+|++|.+||.+...         ..++..++..+|.+....|..... +....    +.    ...
T Consensus       194 ~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (317)
T cd07868         194 TKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNC  273 (317)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcc
Confidence            9999999999999999999999976442         467788888889888777765321 11100    00    000


Q ss_pred             CCCchhhhhcCCCcHHHHHHHHHhcCCCCCCCcCHHHHHhcccc
Q 012191          137 PYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       137 ~~~~~l~~~~~~~s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      .....+.......+..+.+||.+||++||.+|||++|+|+||||
T Consensus       274 ~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         274 SLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             cccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            11111112222346779999999999999999999999999998


No 28 
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.97  E-value=8e-31  Score=258.21  Aligned_cols=175  Identities=41%  Similarity=0.768  Sum_probs=142.5

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.||+|+||||+|||++.++.+||+|||++......  .......+|..|+|||++.+ ..++.++||
T Consensus       114 ~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di  190 (288)
T cd07863         114 MRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQ--MALTPVVVTLWYRAPEVLLQ-STYATPVDM  190 (288)
T ss_pred             HHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccccCc--ccCCCccccccccCchHhhC-CCCCCcchh
Confidence            469999999999999999999999999999999999999998765432  22344577999999999976 458999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|.+||.+......+.++....+.+....|..........+.+..  ...+....+.++..+.+||.+|
T Consensus       191 wslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~  268 (288)
T cd07863         191 WSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRG--PRPVQSVVPEIEESGAQLLLEM  268 (288)
T ss_pred             hhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCC--CCchHHhCcCcCHHHHHHHHHH
Confidence            99999999999999999999988899999888888776666532111111111111  1234455567889999999999


Q ss_pred             cCCCCCCCcCHHHHHhcccc
Q 012191          161 LSVEPYKRATASAALASEYF  180 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F  180 (468)
                      |++||.+|||+.++|.||||
T Consensus       269 L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         269 LTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             hccCcccCCCHHHHhcCCCC
Confidence            99999999999999999998


No 29 
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.97  E-value=5.8e-31  Score=262.42  Aligned_cols=183  Identities=41%  Similarity=0.735  Sum_probs=139.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||+|||++||+||||||+|||++.++.+||+|||++....... .......+|+.|+|||++.+...++.++||
T Consensus       109 ~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di  187 (303)
T cd07869         109 LFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPS-HTYSNEVVTLWYRPPDVLLGSTEYSTCLDM  187 (303)
T ss_pred             HHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCC-ccCCCCcccCCCCChHHHcCCCCCCcHHHH
Confidence            4799999999999999999999999999999999999999986543221 223445789999999999876678899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCch-HHHHHHHHHHcCCCCchhhhccCC-CccccCCCCCCCCchhhhhcC--CCcHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTE-VEQLHKIFKLCGSPPDDYWKKSKL-PHATLFKPQQPYDSSLRETFK--DLPTTAVNL  156 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~-~e~l~~i~~~~g~p~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~--~~s~~l~dL  156 (468)
                      |||||++|+|++|.+||.+..+ .+.+..+....+.+....|..... +..............+...+.  .++..+.+|
T Consensus       188 wslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl  267 (303)
T cd07869         188 WGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDL  267 (303)
T ss_pred             HHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHH
Confidence            9999999999999999987544 466777777778887777754221 110000000001111222222  356789999


Q ss_pred             HHHhcCCCCCCCcCHHHHHhcccccCCC
Q 012191          157 IETLLSVEPYKRATASAALASEYFSTKP  184 (468)
Q Consensus       157 L~~mL~~DP~kRpTa~e~L~Hp~F~~~p  184 (468)
                      |.+||+.||.+|||+.++|+||||+..+
T Consensus       268 i~~mL~~dp~~R~s~~~~l~h~~f~~~~  295 (303)
T cd07869         268 ASKLLQCFPKNRLSAQAALSHEYFSDLP  295 (303)
T ss_pred             HHHHhccCchhccCHHHHhcCcccccCC
Confidence            9999999999999999999999998754


No 30 
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.97  E-value=7e-31  Score=269.12  Aligned_cols=183  Identities=33%  Similarity=0.594  Sum_probs=141.3

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+||||||+|||++.++.+||+|||++......  .......+|..|+|||++.+ ..++.++||
T Consensus       132 ~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~--~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di  208 (364)
T cd07875         132 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILG-MGYKENVDI  208 (364)
T ss_pred             HHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCC--CcccCCcccCCcCCHHHHhC-CCCCchhhH
Confidence            469999999999999999999999999999999999999999765432  22345578999999999976 468899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCC-------------chhhhhcC
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYD-------------SSLRETFK  147 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~-------------~~l~~~~~  147 (468)
                      |||||++|+|++|..||.+.+..+.+..+....+.+..+++................+.             ........
T Consensus       209 wSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (364)
T cd07875         209 WSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNK  288 (364)
T ss_pred             HhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccc
Confidence            99999999999999999999999999999988888776665442211100000000000             00011122


Q ss_pred             CCcHHHHHHHHHhcCCCCCCCcCHHHHHhcccccCCCCC
Q 012191          148 DLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYA  186 (468)
Q Consensus       148 ~~s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~p~~  186 (468)
                      ..+..+++||.+||..||.+|||+.++|+||||..+..+
T Consensus       289 ~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~~~~  327 (364)
T cd07875         289 LKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDP  327 (364)
T ss_pred             cccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccccCc
Confidence            345789999999999999999999999999999864333


No 31 
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is 
Probab=99.97  E-value=1.3e-30  Score=264.59  Aligned_cols=179  Identities=40%  Similarity=0.701  Sum_probs=143.6

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+||||||+|||++.++.+||+|||++.....    .....++|+.|+|||++.+...++.++||
T Consensus       124 ~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~Di  199 (343)
T cd07878         124 IYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADD----EMTGYVATRWYRAPEIMLNWMHYNQTVDI  199 (343)
T ss_pred             HHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCC----CcCCccccccccCchHhcCCccCCchhhh
Confidence            46999999999999999999999999999999999999999876543    23455789999999999876678999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCC--CCCchhhhhcCCCcHHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQ--PYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |||||++|+|++|..||.+....+.+..+....+.+....+..........+....  .....+...+...++.+.+||.
T Consensus       200 wslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  279 (343)
T cd07878         200 WSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLE  279 (343)
T ss_pred             HhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHH
Confidence            99999999999999999999888888888888887776654432211111110000  0112234455667888999999


Q ss_pred             HhcCCCCCCCcCHHHHHhcccccCC
Q 012191          159 TLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      +||..||.+|||+.++|.||||...
T Consensus       280 ~mL~~dp~~R~s~~ell~hp~~~~~  304 (343)
T cd07878         280 KMLVLDSDKRISASEALAHPYFSQY  304 (343)
T ss_pred             HHcCCChhhCCCHHHHhcCcchhcc
Confidence            9999999999999999999999874


No 32 
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.97  E-value=6.8e-31  Score=264.85  Aligned_cols=185  Identities=36%  Similarity=0.619  Sum_probs=144.1

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCC--CCCccccccCCcccChhhhcCC-CCCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH--RQPLTSRVVTLWYRPPELLLGA-TDYGPS   77 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~--~~~~~~~~gt~~Y~APE~l~g~-~~~s~~   77 (468)
                      +.||+.||.|||++||+||||||+|||++.++.+||+|||++.......  .......++|++|+|||++.+. ..++.+
T Consensus       109 ~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~  188 (338)
T cd07859         109 LYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPA  188 (338)
T ss_pred             HHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCch
Confidence            4699999999999999999999999999999999999999987543221  1122456789999999998652 468899


Q ss_pred             cceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCcccc-CC-CCCCCCchhhhhcCCCcHHHHH
Q 012191           78 VDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATL-FK-PQQPYDSSLRETFKDLPTTAVN  155 (468)
Q Consensus        78 sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~-~~-~~~~~~~~l~~~~~~~s~~l~d  155 (468)
                      +|||||||++|+|++|++||.+.+...++..+....+.++...+.......... +. ........+...++.+++.+.+
T Consensus       189 ~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (338)
T cd07859         189 IDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALR  268 (338)
T ss_pred             hHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHH
Confidence            999999999999999999999999888888888888888766554322111000 00 0001112234456678899999


Q ss_pred             HHHHhcCCCCCCCcCHHHHHhcccccCCCC
Q 012191          156 LIETLLSVEPYKRATASAALASEYFSTKPY  185 (468)
Q Consensus       156 LL~~mL~~DP~kRpTa~e~L~Hp~F~~~p~  185 (468)
                      ||.+||..||.+|||+.++|+||||+....
T Consensus       269 li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~  298 (338)
T cd07859         269 LLERLLAFDPKDRPTAEEALADPYFKGLAK  298 (338)
T ss_pred             HHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence            999999999999999999999999987544


No 33 
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.97  E-value=7.4e-31  Score=269.89  Aligned_cols=185  Identities=38%  Similarity=0.620  Sum_probs=145.3

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+||||||+|||++.++.+||+|||++..............++++.|+|||++.+...++.++||
T Consensus       109 ~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di  188 (372)
T cd07853         109 LYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDI  188 (372)
T ss_pred             HHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHH
Confidence            46999999999999999999999999999999999999999976554333344556789999999999876678999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCcc-ccC--CCCCCCCchhhhhcCCCcHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHA-TLF--KPQQPYDSSLRETFKDLPTTAVNLI  157 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~-~~~--~~~~~~~~~l~~~~~~~s~~l~dLL  157 (468)
                      ||||||+|+|++|++||.+.+...++..+...+|.++...+........ ...  ....+....+.......++++.+||
T Consensus       189 wslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  268 (372)
T cd07853         189 WSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLL  268 (372)
T ss_pred             HhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHH
Confidence            9999999999999999999999999999999999887654432110000 000  0000111111223345688999999


Q ss_pred             HHhcCCCCCCCcCHHHHHhcccccCCCC
Q 012191          158 ETLLSVEPYKRATASAALASEYFSTKPY  185 (468)
Q Consensus       158 ~~mL~~DP~kRpTa~e~L~Hp~F~~~p~  185 (468)
                      .+||++||.+|||+.++|.||||....+
T Consensus       269 ~~mL~~dP~~R~t~~e~l~hp~~~~~~~  296 (372)
T cd07853         269 CRMLVFDPDKRISAADALAHPYLDEGRL  296 (372)
T ss_pred             HHhCCCChhhCcCHHHHhcCHhhCCCcc
Confidence            9999999999999999999999987543


No 34 
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.97  E-value=1.2e-30  Score=260.78  Aligned_cols=183  Identities=39%  Similarity=0.743  Sum_probs=146.3

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+||||||+|||++.++.+||+|||++....... .......+|+.|+|||++.+...++.++||
T Consensus       110 ~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di  188 (309)
T cd07872         110 LYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPT-KTYSNEVVTLWYRPPDVLLGSSEYSTQIDM  188 (309)
T ss_pred             HHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCc-cccccccccccccCCHHHhCCCCCCcHHHH
Confidence            3699999999999999999999999999999999999999987543322 122344678999999999776678899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCcc-ccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHA-TLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++|.+||.+.+..+.+..++..++.+....|+....... ..+.........+......++.++++||.+
T Consensus       189 wslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  268 (309)
T cd07872         189 WGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTK  268 (309)
T ss_pred             HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHH
Confidence            9999999999999999999999999999999999998888865332111 000000001112223445788999999999


Q ss_pred             hcCCCCCCCcCHHHHHhcccccCCC
Q 012191          160 LLSVEPYKRATASAALASEYFSTKP  184 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~Hp~F~~~p  184 (468)
                      ||..||.+|||+.++|.||||+..+
T Consensus       269 ~L~~dp~~R~t~~e~l~h~~~~~~~  293 (309)
T cd07872         269 FLQYESKKRISAEEAMKHAYFRSLG  293 (309)
T ss_pred             hccCChhhCCCHHHHhcChhhhhcc
Confidence            9999999999999999999998754


No 35 
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97  E-value=1e-30  Score=271.22  Aligned_cols=153  Identities=29%  Similarity=0.548  Sum_probs=133.0

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      +++|+||+|||.+||+|||||.+|||+..+|.+||+|||++..+..... .-...+||++|||||++.. ..|++++|||
T Consensus       376 re~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~-KR~TmVGTPYWMAPEVvtr-k~YG~KVDIW  453 (550)
T KOG0578|consen  376 REILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS-KRSTMVGTPYWMAPEVVTR-KPYGPKVDIW  453 (550)
T ss_pred             HHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccC-ccccccCCCCccchhhhhh-cccCccccch
Confidence            6789999999999999999999999999999999999999987765543 4456799999999999976 5799999999


Q ss_pred             eeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhc
Q 012191           82 SVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLL  161 (468)
Q Consensus        82 SLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL  161 (468)
                      |||+|+.||+-|.|||-..+....+..|.. .|.|...                         ....+++.+++||.+||
T Consensus       454 SLGIMaIEMveGEPPYlnE~PlrAlyLIa~-ng~P~lk-------------------------~~~klS~~~kdFL~~cL  507 (550)
T KOG0578|consen  454 SLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTPKLK-------------------------NPEKLSPELKDFLDRCL  507 (550)
T ss_pred             hhhhHHHHHhcCCCCccCCChHHHHHHHhh-cCCCCcC-------------------------CccccCHHHHHHHHHHh
Confidence            999999999999999998888877777754 3443321                         12468999999999999


Q ss_pred             CCCCCCCcCHHHHHhcccccC
Q 012191          162 SVEPYKRATASAALASEYFST  182 (468)
Q Consensus       162 ~~DP~kRpTa~e~L~Hp~F~~  182 (468)
                      +.|+.+|++|.|||+||||..
T Consensus       508 ~~dv~~RasA~eLL~HpFl~~  528 (550)
T KOG0578|consen  508 VVDVEQRASAKELLEHPFLKM  528 (550)
T ss_pred             hcchhcCCCHHHHhcChhhhh
Confidence            999999999999999999954


No 36 
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.97  E-value=1.3e-30  Score=268.83  Aligned_cols=169  Identities=34%  Similarity=0.516  Sum_probs=136.4

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCC----------------------CCC---------
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNT----------------------GHR---------   50 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~----------------------~~~---------   50 (468)
                      -+++.||+.||+.|+|||||||+|+|||..|.+||+|||++.-+..                      ...         
T Consensus       248 aE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (550)
T KOG0605|consen  248 AETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRST  327 (550)
T ss_pred             HHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccch
Confidence            4788999999999999999999999999999999999999842211                      000         


Q ss_pred             ---------------CCccccccCCcccChhhhcCCCCCCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCC
Q 012191           51 ---------------QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGS  115 (468)
Q Consensus        51 ---------------~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~  115 (468)
                                     ....+.+|||-|+|||++++ ..|+..+|+||||||+||||.|.|||.+.+..+.+.+|+.--..
T Consensus       328 ~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~-kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~  406 (550)
T KOG0605|consen  328 MSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLG-KGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRET  406 (550)
T ss_pred             hhHHHHHHHHHhhhhhhhhcccCCccccchHHHhc-CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhh
Confidence                           01134589999999999998 45999999999999999999999999999999999999752100


Q ss_pred             CCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhcCCCCCCCcC---HHHHHhcccccCCCCCCCCCCC
Q 012191          116 PPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRAT---ASAALASEYFSTKPYACDLSSL  192 (468)
Q Consensus       116 p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL~~DP~kRpT---a~e~L~Hp~F~~~p~~~~~~~~  192 (468)
                              ...|.                 -..++.+++|||.+||. ||.+|..   +.||-.||||+...|..--...
T Consensus       407 --------l~fP~-----------------~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W~~l~~~~  460 (550)
T KOG0605|consen  407 --------LKFPE-----------------EVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDWDHLREMP  460 (550)
T ss_pred             --------ccCCC-----------------cCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCCcchhhcCC
Confidence                    11111                 12467999999999999 9999975   9999999999999887655544


Q ss_pred             CCCCC
Q 012191          193 PIYPP  197 (468)
Q Consensus       193 p~~~p  197 (468)
                      |.+.|
T Consensus       461 apfvP  465 (550)
T KOG0605|consen  461 APFVP  465 (550)
T ss_pred             CCCCC
Confidence            55554


No 37 
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.97  E-value=1.1e-30  Score=271.70  Aligned_cols=185  Identities=26%  Similarity=0.437  Sum_probs=135.7

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+||||||+|||++.++.+||+|||++..............+||+.|+|||++.+ ..|+.++||
T Consensus       188 ~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di  266 (391)
T PHA03212        188 ERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLAR-DPYGPAVDI  266 (391)
T ss_pred             HHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccccCccCCCChhhhcC-CCCCcHHHH
Confidence            3699999999999999999999999999999999999999986543322223345678999999999876 468999999


Q ss_pred             eeeehhhhhhhhcCCCCCCC-------chHHHHHHHHHHcCCCCchhhhccCCCccccC------CCCCCCCchhhhhcC
Q 012191           81 WSVGCVFAELLIGKPILQGR-------TEVEQLHKIFKLCGSPPDDYWKKSKLPHATLF------KPQQPYDSSLRETFK  147 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~-------~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~~~  147 (468)
                      ||||||+|+|++|..||.+.       ....++..+....|.++.++...........+      ....+..........
T Consensus       267 wSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (391)
T PHA03212        267 WSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLY  346 (391)
T ss_pred             HHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHh
Confidence            99999999999999877543       23456777777777766544211000000000      000011111112223


Q ss_pred             CCcHHHHHHHHHhcCCCCCCCcCHHHHHhcccccCCCCC
Q 012191          148 DLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYA  186 (468)
Q Consensus       148 ~~s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~p~~  186 (468)
                      .++.++.+||.+||++||.+||||.|+|+||||...+.+
T Consensus       347 ~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~~  385 (391)
T PHA03212        347 ELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPDP  385 (391)
T ss_pred             hhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCCC
Confidence            467889999999999999999999999999999886543


No 38 
>PTZ00284 protein kinase; Provisional
Probab=99.97  E-value=1.1e-30  Score=277.14  Aligned_cols=182  Identities=26%  Similarity=0.386  Sum_probs=137.4

Q ss_pred             CHHHHHHHHHHHh-CCCeeccCCCCceEECCCC----------------cEEEEecCCccccCCCCCCCccccccCCccc
Q 012191            1 MNQLLHGLEHCHS-RGVLHRDIKGSNLLVNNEG----------------VLKLADFGLANFSNTGHRQPLTSRVVTLWYR   63 (468)
Q Consensus         1 m~QLL~gL~yLHs-~gIvHrDIKp~NILld~~g----------------~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~   63 (468)
                      +.||+.||+|||+ .|||||||||+|||++.++                .+||+|||++....    ...+..+||+.|+
T Consensus       237 ~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~----~~~~~~~gt~~Y~  312 (467)
T PTZ00284        237 IFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDER----HSRTAIVSTRHYR  312 (467)
T ss_pred             HHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCc----cccccccCCcccc
Confidence            4699999999998 5999999999999998765                49999999875432    2234568899999


Q ss_pred             ChhhhcCCCCCCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccc-cCCCCC----CC
Q 012191           64 PPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHAT-LFKPQQ----PY  138 (468)
Q Consensus        64 APE~l~g~~~~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~-~~~~~~----~~  138 (468)
                      |||++.+ ..|+.++||||||||||||++|++||.+.+..+.+..+.+.+|.++..++..+...... .+....    .+
T Consensus       313 APE~~~~-~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  391 (467)
T PTZ00284        313 SPEVVLG-LGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCT  391 (467)
T ss_pred             CcHHhhc-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccC
Confidence            9999987 46899999999999999999999999999999999999999998887665432211100 000000    00


Q ss_pred             Cc-hhhhh-----c--CCCcHHHHHHHHHhcCCCCCCCcCHHHHHhcccccCCCCCC
Q 012191          139 DS-SLRET-----F--KDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYAC  187 (468)
Q Consensus       139 ~~-~l~~~-----~--~~~s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~p~~~  187 (468)
                      .. .+...     +  ....+.+.+||.+||++||.+|||+.|+|+||||......|
T Consensus       392 ~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~~~~  448 (467)
T PTZ00284        392 DPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYYPEC  448 (467)
T ss_pred             CHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccccccCCcc
Confidence            00 00000     0  01246688999999999999999999999999998754433


No 39 
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97  E-value=1.8e-30  Score=259.97  Aligned_cols=155  Identities=33%  Similarity=0.481  Sum_probs=123.1

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECC-CCcEEEEecCCccccCC--CCCCCccccccCCcccChhhhcCCCCCCCCc
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNN-EGVLKLADFGLANFSNT--GHRQPLTSRVVTLWYRPPELLLGATDYGPSV   78 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~-~g~vKL~DFGla~~~~~--~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~s   78 (468)
                      +|||+||.|||++||||+||||+|||++. ++.+||+|||++.....  ..........||+.|||||++........++
T Consensus       124 r~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~s  203 (313)
T KOG0198|consen  124 RQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRES  203 (313)
T ss_pred             HHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccc
Confidence            79999999999999999999999999999 79999999999876653  1112344678999999999998522233599


Q ss_pred             ceeeeehhhhhhhhcCCCCCCC-chHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHH
Q 012191           79 DLWSVGCVFAELLIGKPILQGR-TEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLI  157 (468)
Q Consensus        79 DIWSLG~ILyeLltG~~pf~g~-~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL  157 (468)
                      |||||||++.||+||.+||... ...+.+..+......|                           .....++.++++||
T Consensus       204 DiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P---------------------------~ip~~ls~~a~~Fl  256 (313)
T KOG0198|consen  204 DIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLP---------------------------EIPDSLSDEAKDFL  256 (313)
T ss_pred             hhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCC---------------------------CCCcccCHHHHHHH
Confidence            9999999999999999999873 3333333332111001                           11245899999999


Q ss_pred             HHhcCCCCCCCcCHHHHHhcccccCC
Q 012191          158 ETLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       158 ~~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      .+||..||.+||||.++|.|||....
T Consensus       257 ~~C~~~~p~~Rpta~eLL~hpf~~~~  282 (313)
T KOG0198|consen  257 RKCFKRDPEKRPTAEELLEHPFLKQN  282 (313)
T ss_pred             HHHhhcCcccCcCHHHHhhChhhhcc
Confidence            99999999999999999999999764


No 40 
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96  E-value=1e-30  Score=255.14  Aligned_cols=180  Identities=36%  Similarity=0.651  Sum_probs=148.2

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      ++|++.|+.|||+.||+||||||+||++..++.+||.|||+++.....  -.++.+++|..|+|||++.+.. |...+||
T Consensus       124 ~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~--~~mtpyVvtRyyrapevil~~~-~ke~vdi  200 (369)
T KOG0665|consen  124 LYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD--FMMTPYVVTRYYRAPEVILGMG-YKENVDI  200 (369)
T ss_pred             HHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCcc--cccCchhheeeccCchheeccC-Ccccchh
Confidence            479999999999999999999999999999999999999999765543  4678889999999999999865 9999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCC-chhhhhcC------------
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYD-SSLRETFK------------  147 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~------------  147 (468)
                      ||+|||+.||++|...|.|.+..+++.++...+|.|.+.|........+..+.....|. ..+.+.|+            
T Consensus       201 wSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~  280 (369)
T KOG0665|consen  201 WSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSK  280 (369)
T ss_pred             hhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCc
Confidence            99999999999999999999999999999999999999987664332222222111110 11222222            


Q ss_pred             CCcHHHHHHHHHhcCCCCCCCcCHHHHHhcccccCC
Q 012191          148 DLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       148 ~~s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      .-+..+.+|+.+||..||++|+++.++|.||||+-|
T Consensus       281 ~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~vw  316 (369)
T KOG0665|consen  281 LDCSLARDLLSKMLVIDPEKRISVDDALRHPYIKVW  316 (369)
T ss_pred             cchHHHHHHHHHhhccChhhcccHHHHhcCCeeeee
Confidence            224558999999999999999999999999999944


No 41 
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.96  E-value=2.6e-30  Score=264.39  Aligned_cols=181  Identities=35%  Similarity=0.635  Sum_probs=139.1

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+||||||+|||++.++.+||+|||++......  .......+|+.|+|||++.+ ..++.++||
T Consensus       129 ~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~--~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di  205 (359)
T cd07876         129 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN--FMMTPYVVTRYYRAPEVILG-MGYKENVDI  205 (359)
T ss_pred             HHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccccC--ccCCCCcccCCCCCchhccC-CCCCcchhh
Confidence            369999999999999999999999999999999999999998754332  22345678999999999976 468899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccC--CC---CCCCCc--------hhhhhcC
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLF--KP---QQPYDS--------SLRETFK  147 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~--~~---~~~~~~--------~l~~~~~  147 (468)
                      |||||++|+|++|..||.+.+....+..+...++.+...++...........  .+   ...+..        .......
T Consensus       206 wSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (359)
T cd07876         206 WSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDK  285 (359)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhcccccccccccccc
Confidence            9999999999999999999998888888888888877665433110000000  00   000000        0011112


Q ss_pred             CCcHHHHHHHHHhcCCCCCCCcCHHHHHhcccccCCC
Q 012191          148 DLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKP  184 (468)
Q Consensus       148 ~~s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~p  184 (468)
                      ..+..+++||.+||.+||.+|||+.|+|+||||..+.
T Consensus       286 ~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~  322 (359)
T cd07876         286 LKTSQARDLLSKMLVIDPDKRISVDEALRHPYITVWY  322 (359)
T ss_pred             ccchhHHHHHHHHhccCcccCCCHHHHhcCchhhhhc
Confidence            3567899999999999999999999999999998643


No 42 
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.96  E-value=3.8e-30  Score=256.17  Aligned_cols=177  Identities=28%  Similarity=0.497  Sum_probs=135.4

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECC--------------------CCcEEEEecCCccccCCCCCCCccccccCCc
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNN--------------------EGVLKLADFGLANFSNTGHRQPLTSRVVTLW   61 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~--------------------~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~   61 (468)
                      +||+.+|+|||+.+++|.||||+|||+.+                    +..|+|+|||.|++.....    ...+.|..
T Consensus       199 ~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h----s~iVsTRH  274 (415)
T KOG0671|consen  199 YQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH----STIVSTRH  274 (415)
T ss_pred             HHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCc----ceeeeccc
Confidence            69999999999999999999999999832                    2348999999998765432    55677999


Q ss_pred             ccChhhhcCCCCCCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhcc---------CCCccccC
Q 012191           62 YRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKS---------KLPHATLF  132 (468)
Q Consensus        62 Y~APE~l~g~~~~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~---------~~~~~~~~  132 (468)
                      |+|||+++| ..|+..+||||+||||+||++|..+|++.++.+.+..+...+|++|.......         ++......
T Consensus       275 YRAPEViLg-LGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~  353 (415)
T KOG0671|consen  275 YRAPEVILG-LGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVS  353 (415)
T ss_pred             cCCchheec-cCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCcccc
Confidence            999999998 56999999999999999999999999999999999989899998776543322         11110000


Q ss_pred             CCC-----CCCCchhhhhcC---CCcHHHHHHHHHhcCCCCCCCcCHHHHHhcccccCC
Q 012191          133 KPQ-----QPYDSSLRETFK---DLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       133 ~~~-----~~~~~~l~~~~~---~~s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      ...     ......+.....   .....+.|||++||.+||.+|+|+.|||.||||..-
T Consensus       354 ~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~  412 (415)
T KOG0671|consen  354 SKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARL  412 (415)
T ss_pred             ccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcC
Confidence            000     000001111111   123458999999999999999999999999999863


No 43 
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.96  E-value=4.3e-30  Score=262.23  Aligned_cols=181  Identities=34%  Similarity=0.606  Sum_probs=139.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+||||||+|||++.++.+||+|||++......  .......+|+.|+|||++.+ ..++.++||
T Consensus       125 ~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di  201 (355)
T cd07874         125 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILG-MGYKENVDI  201 (355)
T ss_pred             HHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCc--cccCCccccCCccCHHHHcC-CCCCchhhH
Confidence            369999999999999999999999999999999999999999765432  22345678999999999976 468899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCC---------C----chhhhhcC
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPY---------D----SSLRETFK  147 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~---------~----~~l~~~~~  147 (468)
                      |||||++|+|++|..||.+....+.+..+...++.+..+++................+         .    ........
T Consensus       202 wslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (355)
T cd07874         202 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK  281 (355)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhcccccccccccccc
Confidence            9999999999999999999998888888888888776665543221100000000000         0    00011122


Q ss_pred             CCcHHHHHHHHHhcCCCCCCCcCHHHHHhcccccCCC
Q 012191          148 DLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKP  184 (468)
Q Consensus       148 ~~s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~p  184 (468)
                      ..+..+++||.+||..||.+|||+.|+|+||||...-
T Consensus       282 ~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~~  318 (355)
T cd07874         282 LKASQARDLLSKMLVIDPAKRISVDEALQHPYINVWY  318 (355)
T ss_pred             ccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhccc
Confidence            3567889999999999999999999999999998643


No 44 
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.96  E-value=3.8e-30  Score=257.11  Aligned_cols=180  Identities=38%  Similarity=0.694  Sum_probs=134.9

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEE----CCCCcEEEEecCCccccCCCCC--CCccccccCCcccChhhhcCCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLV----NNEGVLKLADFGLANFSNTGHR--QPLTSRVVTLWYRPPELLLGATDY   74 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILl----d~~g~vKL~DFGla~~~~~~~~--~~~~~~~gt~~Y~APE~l~g~~~~   74 (468)
                      +.||+.||.|||+.||+||||||+|||+    +.++.+||+|||++........  .......+|+.|+|||++.+...+
T Consensus       114 ~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~  193 (317)
T cd07867         114 LYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHY  193 (317)
T ss_pred             HHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCcc
Confidence            3699999999999999999999999999    4567899999999976653321  123345779999999999876668


Q ss_pred             CCCcceeeeehhhhhhhhcCCCCCCCch---------HHHHHHHHHHcCCCCchhhhccCCC-cc----ccCCCC----C
Q 012191           75 GPSVDLWSVGCVFAELLIGKPILQGRTE---------VEQLHKIFKLCGSPPDDYWKKSKLP-HA----TLFKPQ----Q  136 (468)
Q Consensus        75 s~~sDIWSLG~ILyeLltG~~pf~g~~~---------~e~l~~i~~~~g~p~~~~~~~~~~~-~~----~~~~~~----~  136 (468)
                      +.++|||||||++|+|++|.+||.+..+         ..++..++..++.+....|...... ..    ..+...    .
T Consensus       194 ~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (317)
T cd07867         194 TKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANS  273 (317)
T ss_pred             CcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCc
Confidence            9999999999999999999999976432         4567778888888887777653211 00    000000    0


Q ss_pred             CCCchhhhhcCCCcHHHHHHHHHhcCCCCCCCcCHHHHHhcccc
Q 012191          137 PYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       137 ~~~~~l~~~~~~~s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      .....+.......+..+.+||.+||+.||.+|||+.|+|+||||
T Consensus       274 ~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         274 SLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             hhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            00001111112346779999999999999999999999999998


No 45 
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96  E-value=2e-30  Score=248.25  Aligned_cols=184  Identities=39%  Similarity=0.646  Sum_probs=151.7

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      ++|||.||.|||+.||+||||||.|+|++.+..+||||||+++.........++..+.|.+|+|||++.|...|+.++||
T Consensus       162 lYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDi  241 (449)
T KOG0664|consen  162 VYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDI  241 (449)
T ss_pred             HHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccce
Confidence            48999999999999999999999999999999999999999998877766778888999999999999999999999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhcc-CCCccccCCCCCCCCchhhhhcC-----CCcHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKS-KLPHATLFKPQQPYDSSLRETFK-----DLPTTAV  154 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~-----~~s~~l~  154 (468)
                      ||+|||+.|||..+.+|+.....+++..|..++|.|..+..... .-...-.++. .+...++...+.     .-..+..
T Consensus       242 WSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~-~~k~Ps~~vLYtlsS~~~~~heav  320 (449)
T KOG0664|consen  242 WSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRA-GLRAPDTQRLYKIASPDDKNHEAV  320 (449)
T ss_pred             ehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhcc-CCCCCCccceeeecCCcccchHHH
Confidence            99999999999999999999999999999999999988765532 1111111111 111111111111     2345688


Q ss_pred             HHHHHhcCCCCCCCcCHHHHHhcccccCCCC
Q 012191          155 NLIETLLSVEPYKRATASAALASEYFSTKPY  185 (468)
Q Consensus       155 dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~p~  185 (468)
                      +++..||.+||.+|++.+++|.|+|.....+
T Consensus       321 ~~~~~~l~~d~dkris~~~A~~~~~~~e~R~  351 (449)
T KOG0664|consen  321 DLLQKLLHFDPDKRISVEEALQHRYLEEGRL  351 (449)
T ss_pred             HHHHHHhCCCCcccccHhhhcccccccccce
Confidence            9999999999999999999999999876543


No 46 
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.96  E-value=1.1e-29  Score=249.56  Aligned_cols=179  Identities=43%  Similarity=0.729  Sum_probs=141.3

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+|+||||+||+++.++.++|+|||++....... .......++..|+|||.+.+...++.++||
T Consensus       105 ~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di  183 (284)
T cd07839         105 MFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV-RCYSAEVVTLWYRPPDVLFGAKLYSTSIDM  183 (284)
T ss_pred             HHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC-CCcCCCccccCCcChHHHhCCcccCcHHHH
Confidence            3699999999999999999999999999999999999999987554322 223345678999999999876668899999


Q ss_pred             eeeehhhhhhhhcCCC-CCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPI-LQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLltG~~p-f~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++|..| |.+.+..+.+..+++.++.+....|............+..+....+....+.++.++.+||.+
T Consensus       184 wslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  263 (284)
T cd07839         184 WSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQN  263 (284)
T ss_pred             HHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHH
Confidence            9999999999998766 567777788888888888887776654221111111112222223344556789999999999


Q ss_pred             hcCCCCCCCcCHHHHHhcccc
Q 012191          160 LLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      ||..||.+|||+.++|.||||
T Consensus       264 ~l~~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         264 LLVCNPVQRISAEEALQHPYF  284 (284)
T ss_pred             HhcCChhhcCCHHHHhcCCCC
Confidence            999999999999999999998


No 47 
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.96  E-value=8.3e-30  Score=246.81  Aligned_cols=157  Identities=30%  Similarity=0.454  Sum_probs=129.6

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECC---CCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNN---EGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPS   77 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~---~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~   77 (468)
                      |+||..||.|||+.+|.||||||+|+|...   +..+||+|||+|+.....  ..+...+.|++|.|||++ |...|+..
T Consensus       167 ~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~--~~L~TPc~TPyYvaPevl-g~eKydks  243 (400)
T KOG0604|consen  167 MKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEP--GDLMTPCFTPYYVAPEVL-GPEKYDKS  243 (400)
T ss_pred             HHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccCCC--ccccCCcccccccCHHHh-CchhcCCC
Confidence            589999999999999999999999999965   457999999999765432  456667889999999988 44679999


Q ss_pred             cceeeeehhhhhhhhcCCCCCCCch----HHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHH
Q 012191           78 VDLWSVGCVFAELLIGKPILQGRTE----VEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTA  153 (468)
Q Consensus        78 sDIWSLG~ILyeLltG~~pf~g~~~----~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l  153 (468)
                      +|+||+|||+|.||||.|||.....    ...-.+|......+|++.|                         ..+|+++
T Consensus       244 cdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEW-------------------------s~VSe~a  298 (400)
T KOG0604|consen  244 CDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEW-------------------------SCVSEAA  298 (400)
T ss_pred             CCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhH-------------------------hHHHHHH
Confidence            9999999999999999999976543    2234445444444444444                         4689999


Q ss_pred             HHHHHHhcCCCCCCCcCHHHHHhcccccCCCC
Q 012191          154 VNLIETLLSVEPYKRATASAALASEYFSTKPY  185 (468)
Q Consensus       154 ~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~p~  185 (468)
                      +++|+.||..+|.+|.|+.+++.|||++....
T Consensus       299 KdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~  330 (400)
T KOG0604|consen  299 KDLIRKLLKTEPTERLTIEEVMDHPWINQYEA  330 (400)
T ss_pred             HHHHHHHhcCCchhheeHHHhhcCchhccccc
Confidence            99999999999999999999999999987543


No 48 
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.96  E-value=9.5e-30  Score=249.87  Aligned_cols=177  Identities=44%  Similarity=0.801  Sum_probs=141.3

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.||+|+||+|+|||++.++.++|+|||++....... .......+++.|+|||.+.+...++.++||
T Consensus       107 ~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv  185 (285)
T cd07861         107 LYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV-RVYTHEVVTLWYRAPEVLLGSPRYSTPVDI  185 (285)
T ss_pred             HHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc-ccccCCcccccccChHHhcCCCCcCcHHHH
Confidence            4799999999999999999999999999999999999999987554321 222344668899999998776667889999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCC--CCCchhhhhcCCCcHHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQ--PYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |||||++|+|++|.+||.+.+....+..++...+.+....|........  +....  .....+......++.++.+||.
T Consensus       186 ~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~  263 (285)
T cd07861         186 WSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPD--YKNTFPKWKKGSLRSAVKNLDEDGLDLLE  263 (285)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHH--HHhhccccCcchhHHhcCCCCHHHHHHHH
Confidence            9999999999999999999988888888888888887777754221111  11100  0111223344568999999999


Q ss_pred             HhcCCCCCCCcCHHHHHhcccc
Q 012191          159 TLLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      +||..||.+|||+.++|.||||
T Consensus       264 ~~l~~dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         264 KMLIYDPAKRISAKKALNHPYF  285 (285)
T ss_pred             HHhcCChhhCCCHHHHhcCCCC
Confidence            9999999999999999999998


No 49 
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.96  E-value=1.5e-29  Score=251.84  Aligned_cols=180  Identities=42%  Similarity=0.756  Sum_probs=143.2

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      .||+.||+|||+.||+|+||||+|||++.++.++|+|||++....... .......+++.|+|||++.+...++.++|||
T Consensus       111 ~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~  189 (301)
T cd07873         111 FQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT-KTYSNEVVTLWYRPPDILLGSTDYSTQIDMW  189 (301)
T ss_pred             HHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC-CcccccceeecccCcHHHhCCCCCccHHHHH
Confidence            689999999999999999999999999999999999999986543221 1223446688999999988766788899999


Q ss_pred             eeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCC-ccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           82 SVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLP-HATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        82 SLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||||++|+|++|.+||.+.+..+++..+....+.+....|...... ....+.........+......++..+.+||.+|
T Consensus       190 slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~m  269 (301)
T cd07873         190 GVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKL  269 (301)
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHH
Confidence            9999999999999999999988899999998888888877643111 000011000111222334457889999999999


Q ss_pred             cCCCCCCCcCHHHHHhcccccC
Q 012191          161 LSVEPYKRATASAALASEYFST  182 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F~~  182 (468)
                      |+.||.+|||+.++|+||||..
T Consensus       270 l~~dp~~R~t~~eil~h~~f~~  291 (301)
T cd07873         270 LQFEGRKRISAEEAMKHPYFHC  291 (301)
T ss_pred             hcCCcccCcCHHHHhcCccccc
Confidence            9999999999999999999975


No 50 
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.96  E-value=1.4e-29  Score=255.61  Aligned_cols=153  Identities=26%  Similarity=0.433  Sum_probs=126.2

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      .||+.||+|||++||+||||||+|||++.++.+||+|||++....... ......+||+.|+|||++.+ ..++.++|||
T Consensus       102 ~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~Diw  179 (323)
T cd05571         102 AEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG-ATMKTFCGTPEYLAPEVLED-NDYGRAVDWW  179 (323)
T ss_pred             HHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC-CcccceecCccccChhhhcC-CCCCccccCc
Confidence            699999999999999999999999999999999999999986532211 22344578999999999976 4689999999


Q ss_pred             eeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhc
Q 012191           82 SVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLL  161 (468)
Q Consensus        82 SLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL  161 (468)
                      ||||++|+|++|..||.+.+.......+......                             ....++.++.+||.+||
T Consensus       180 SlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~-----------------------------~p~~~~~~~~~li~~~L  230 (323)
T cd05571         180 GLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR-----------------------------FPRTLSPEAKSLLAGLL  230 (323)
T ss_pred             ccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCC-----------------------------CCCCCCHHHHHHHHHHc
Confidence            9999999999999999887766655554321100                             01347889999999999


Q ss_pred             CCCCCCCc-----CHHHHHhcccccCCCC
Q 012191          162 SVEPYKRA-----TASAALASEYFSTKPY  185 (468)
Q Consensus       162 ~~DP~kRp-----Ta~e~L~Hp~F~~~p~  185 (468)
                      ..||.+||     ++.++|+||||....|
T Consensus       231 ~~dP~~R~~~~~~~~~~ll~h~~f~~~~~  259 (323)
T cd05571         231 KKDPKQRLGGGPEDAKEIMEHRFFASINW  259 (323)
T ss_pred             cCCHHHcCCCCCCCHHHHHcCCCcCCCCH
Confidence            99999999     8999999999987544


No 51 
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.96  E-value=5e-30  Score=248.17  Aligned_cols=151  Identities=26%  Similarity=0.425  Sum_probs=134.2

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      -||+.||+|||+++|++|||||+|||||.+|.+||+|||+|.....    .....|||+.|+|||++.. ..|+.++|.|
T Consensus       151 AeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~----rT~TlCGTPeYLAPEii~s-k~ynkavDWW  225 (355)
T KOG0616|consen  151 AEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG----RTWTLCGTPEYLAPEIIQS-KGYNKAVDWW  225 (355)
T ss_pred             HHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecC----cEEEecCCccccChHHhhc-CCCCcchhHH
Confidence            4899999999999999999999999999999999999999987764    2456799999999999976 6799999999


Q ss_pred             eeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhc
Q 012191           82 SVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLL  161 (468)
Q Consensus        82 SLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL  161 (468)
                      +|||++|||+.|.+||...+....+++|...--..|                             ..++.++++||.++|
T Consensus       226 alGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP-----------------------------~~fs~~~kdLl~~LL  276 (355)
T KOG0616|consen  226 ALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFP-----------------------------SYFSSDAKDLLKKLL  276 (355)
T ss_pred             HHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCC-----------------------------cccCHHHHHHHHHHH
Confidence            999999999999999999999999999977433332                             257899999999999


Q ss_pred             CCCCCCCc-----CHHHHHhcccccCCCCC
Q 012191          162 SVEPYKRA-----TASAALASEYFSTKPYA  186 (468)
Q Consensus       162 ~~DP~kRp-----Ta~e~L~Hp~F~~~p~~  186 (468)
                      +.|-.+|.     ...++..||||+...|.
T Consensus       277 ~vD~t~R~gnlknG~~dIk~H~wF~~v~W~  306 (355)
T KOG0616|consen  277 QVDLTKRFGNLKNGVEDIKNHPWFKGVDWE  306 (355)
T ss_pred             hhhhHhhhcCcCCCccccccCcccccccHH
Confidence            99999993     46799999999987764


No 52 
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.96  E-value=1.3e-29  Score=256.16  Aligned_cols=160  Identities=28%  Similarity=0.387  Sum_probs=124.1

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+||||||+|||++.++.+||+|||++..+...........+||+.|+|||++.+...++.++||
T Consensus       111 ~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di  190 (332)
T cd05614         111 SGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDW  190 (332)
T ss_pred             HHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCcccc
Confidence            36999999999999999999999999999999999999999876544333333456789999999999875567889999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||||||+|+|++|..||...........+.........                         .....++..+.+||.+|
T Consensus       191 wslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~li~~~  245 (332)
T cd05614         191 WSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDP-------------------------PFPSFIGPEAQDLLHKL  245 (332)
T ss_pred             ccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCC-------------------------CCCCCCCHHHHHHHHHH
Confidence            99999999999999999754322111111111000000                         01134788899999999


Q ss_pred             cCCCCCCCc-----CHHHHHhcccccCCCC
Q 012191          161 LSVEPYKRA-----TASAALASEYFSTKPY  185 (468)
Q Consensus       161 L~~DP~kRp-----Ta~e~L~Hp~F~~~p~  185 (468)
                      |..||.+||     ++.++|+||||+...|
T Consensus       246 l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~  275 (332)
T cd05614         246 LRKDPKKRLGAGPQGASEIKEHPFFKGLDW  275 (332)
T ss_pred             cCCCHHHcCCCCCCCHHHHHcCCCcCCCCH
Confidence            999999999     8899999999987544


No 53 
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.96  E-value=3.1e-29  Score=246.05  Aligned_cols=181  Identities=41%  Similarity=0.781  Sum_probs=145.6

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||+|||+.||+|+||||+||+++.++.++|+|||++...............++.+|+|||.+.+...++.++||
T Consensus       105 ~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di  184 (286)
T cd07832         105 MRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDL  184 (286)
T ss_pred             HHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccccccCcccccCceeeeccccCCchhHH
Confidence            46899999999999999999999999999999999999999876654332233455789999999998766667899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCC-CccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKL-PHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      ||+||++|+|++|.++|.+.++...+..+...++.+....|+.... ...............+...++..+..+.+||.+
T Consensus       185 ~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  264 (286)
T cd07832         185 WAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKG  264 (286)
T ss_pred             HHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHH
Confidence            9999999999999999999999999999998888887766654221 111111111111223455667788999999999


Q ss_pred             hcCCCCCCCcCHHHHHhccccc
Q 012191          160 LLSVEPYKRATASAALASEYFS  181 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~Hp~F~  181 (468)
                      ||..||.+|||+.++|.||||.
T Consensus       265 ~l~~~p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         265 LLVYDPSKRLSAAEALRHPYFT  286 (286)
T ss_pred             HhccChhhCCCHHHHhhCcCcC
Confidence            9999999999999999999994


No 54 
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.96  E-value=1.6e-29  Score=250.06  Aligned_cols=156  Identities=25%  Similarity=0.447  Sum_probs=126.1

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      .||+.||+|||+.||+||||||+|||++.++.++|+|||++......  .......||..|+|||++.+ ..++.++|||
T Consensus       109 ~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dvw  185 (285)
T cd05631         109 AELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG--ETVRGRVGTVGYMAPEVINN-EKYTFSPDWW  185 (285)
T ss_pred             HHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC--CeecCCCCCCCccCHhhhcC-CCCCcccCch
Confidence            68999999999999999999999999999999999999999765432  22345578999999999976 4689999999


Q ss_pred             eeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhc
Q 012191           82 SVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLL  161 (468)
Q Consensus        82 SLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL  161 (468)
                      ||||++|+|++|.+||.+.........+...+.....                         .....++..+.+||.+||
T Consensus       186 slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~s~~~~~li~~~l  240 (285)
T cd05631         186 GLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQE-------------------------EYSEKFSEDAKSICRMLL  240 (285)
T ss_pred             hHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccc-------------------------cCCccCCHHHHHHHHHHh
Confidence            9999999999999999887654433333322211111                         111357889999999999


Q ss_pred             CCCCCCCcC-----HHHHHhcccccCCCC
Q 012191          162 SVEPYKRAT-----ASAALASEYFSTKPY  185 (468)
Q Consensus       162 ~~DP~kRpT-----a~e~L~Hp~F~~~p~  185 (468)
                      +.||.+|||     ++++++||||....+
T Consensus       241 ~~~P~~R~~~~~~~~~~~~~h~~~~~~~~  269 (285)
T cd05631         241 TKNPKERLGCRGNGAAGVKQHPIFKNINF  269 (285)
T ss_pred             hcCHHHhcCCCCCCHHHHhcCHhhcCCCH
Confidence            999999997     999999999987544


No 55 
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.96  E-value=3.5e-29  Score=252.82  Aligned_cols=160  Identities=26%  Similarity=0.391  Sum_probs=129.3

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcC-----CCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLG-----ATDYG   75 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g-----~~~~s   75 (468)
                      +.||+.||.|||+.||+||||||+|||++.++.+||+|||++...............+|+.|+|||++..     ...++
T Consensus       108 ~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  187 (330)
T cd05601         108 LAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYG  187 (330)
T ss_pred             HHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCC
Confidence            3699999999999999999999999999999999999999997665433222334578999999999863     34578


Q ss_pred             CCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHH
Q 012191           76 PSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVN  155 (468)
Q Consensus        76 ~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~d  155 (468)
                      .++||||||||+|+|++|..||.+.+....+..+........                         ......++..+.+
T Consensus       188 ~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~-------------------------~~~~~~~~~~~~~  242 (330)
T cd05601         188 VECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLK-------------------------FPEDPKVSSDFLD  242 (330)
T ss_pred             CcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccC-------------------------CCCCCCCCHHHHH
Confidence            899999999999999999999998887777666644211000                         0011357889999


Q ss_pred             HHHHhcCCCCCCCcCHHHHHhcccccCCCCC
Q 012191          156 LIETLLSVEPYKRATASAALASEYFSTKPYA  186 (468)
Q Consensus       156 LL~~mL~~DP~kRpTa~e~L~Hp~F~~~p~~  186 (468)
                      ||.+||. ||.+|||+.+++.||||....|.
T Consensus       243 li~~ll~-~p~~R~t~~~l~~h~~~~~~~~~  272 (330)
T cd05601         243 LIQSLLC-GQKERLGYEGLCCHPFFSKIDWN  272 (330)
T ss_pred             HHHHHcc-ChhhCCCHHHHhCCCCcCCCCHH
Confidence            9999998 99999999999999999876543


No 56 
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.96  E-value=3.6e-29  Score=258.49  Aligned_cols=159  Identities=38%  Similarity=0.569  Sum_probs=137.8

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCC----CcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNE----GVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGP   76 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~----g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~   76 (468)
                      ++||+.|+.|||+.||+||||||+|||+...    +.+|++|||++.+...  .......+||+.|+|||++.. ..|+.
T Consensus       141 ~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~--~~~~~~~~Gtp~y~APEvl~~-~~y~~  217 (382)
T KOG0032|consen  141 IRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP--GERLHTIVGTPEYVAPEVLGG-RPYGD  217 (382)
T ss_pred             HHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC--CceEeeecCCccccCchhhcC-CCCCc
Confidence            4799999999999999999999999999543    4799999999988776  356778899999999999975 57999


Q ss_pred             CcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHH
Q 012191           77 SVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNL  156 (468)
Q Consensus        77 ~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dL  156 (468)
                      .+||||+||++|.|++|.+||.+.+.......|...-.....                         +.|..++..+++|
T Consensus       218 ~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~-------------------------~~w~~is~~akd~  272 (382)
T KOG0032|consen  218 EVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTS-------------------------EPWDDISESAKDF  272 (382)
T ss_pred             ccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCC-------------------------CCccccCHHHHHH
Confidence            999999999999999999999999998888877654333333                         3346789999999


Q ss_pred             HHHhcCCCCCCCcCHHHHHhcccccCCCCCC
Q 012191          157 IETLLSVEPYKRATASAALASEYFSTKPYAC  187 (468)
Q Consensus       157 L~~mL~~DP~kRpTa~e~L~Hp~F~~~p~~~  187 (468)
                      |..||..||.+|+|+.++|+|||++.....+
T Consensus       273 i~~ll~~dp~~R~ta~~~L~HpWi~~~~~~~  303 (382)
T KOG0032|consen  273 IRKLLEFDPRKRLTAAQALQHPWIKSIGEAT  303 (382)
T ss_pred             HHHhcccCcccCCCHHHHhcCccccCCcccc
Confidence            9999999999999999999999998764443


No 57 
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.96  E-value=6.8e-29  Score=249.19  Aligned_cols=152  Identities=31%  Similarity=0.459  Sum_probs=125.5

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+||||||+|||++.++.++|+|||++....... ......+||+.|+|||++.+ ..++.++||
T Consensus        99 ~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv  176 (312)
T cd05585          99 TAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD-DKTNTFCGTPEYLAPELLLG-HGYTKAVDW  176 (312)
T ss_pred             HHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCC-CccccccCCcccCCHHHHcC-CCCCCccce
Confidence            3699999999999999999999999999999999999999987543221 22344578999999999976 568999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|.+||.+.+..+.+..+.....                             .....++..+.+||.+|
T Consensus       177 wslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~li~~~  227 (312)
T cd05585         177 WTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPL-----------------------------RFPDGFDRDAKDLLIGL  227 (312)
T ss_pred             echhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCC-----------------------------CCCCcCCHHHHHHHHHH
Confidence            9999999999999999998777666655532110                             01135778899999999


Q ss_pred             cCCCCCCCc---CHHHHHhcccccCC
Q 012191          161 LSVEPYKRA---TASAALASEYFSTK  183 (468)
Q Consensus       161 L~~DP~kRp---Ta~e~L~Hp~F~~~  183 (468)
                      |..||.+||   ++.++|.||||...
T Consensus       228 L~~dp~~R~~~~~~~e~l~hp~~~~~  253 (312)
T cd05585         228 LSRDPTRRLGYNGAQEIKNHPFFSQL  253 (312)
T ss_pred             cCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence            999999997   58999999999874


No 58 
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96  E-value=1.6e-29  Score=257.03  Aligned_cols=156  Identities=30%  Similarity=0.463  Sum_probs=132.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCC----CCCccccccCCcccChhhhcC---CCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH----RQPLTSRVVTLWYRPPELLLG---ATD   73 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~----~~~~~~~~gt~~Y~APE~l~g---~~~   73 (468)
                      ++.++.||+|||.+|||||||||+|+||+.+|++||+|||.+..+..+.    ...+...+||+.|+|||++.+   ...
T Consensus       216 lrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~  295 (576)
T KOG0585|consen  216 LRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSY  295 (576)
T ss_pred             HHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccc
Confidence            4678999999999999999999999999999999999999998663221    122344699999999999977   334


Q ss_pred             CCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHH
Q 012191           74 YGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTA  153 (468)
Q Consensus        74 ~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l  153 (468)
                      .+.+.||||+||+||.|+.|+.||.+....+.+.+|...-...|                           ..+++.+.+
T Consensus       296 ~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP---------------------------~~pe~~e~~  348 (576)
T KOG0585|consen  296 SGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFP---------------------------ENPEINEDL  348 (576)
T ss_pred             cchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCC---------------------------CcccccHHH
Confidence            57899999999999999999999999999999999976322221                           123578899


Q ss_pred             HHHHHHhcCCCCCCCcCHHHHHhcccccCC
Q 012191          154 VNLIETLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       154 ~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      +|||.+||..||.+|+|+.++..|||....
T Consensus       349 kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~  378 (576)
T KOG0585|consen  349 KDLIKRLLEKDPEQRITLPDIKLHPWVTRD  378 (576)
T ss_pred             HHHHHHHhhcChhheeehhhheecceeccC
Confidence            999999999999999999999999999864


No 59 
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.96  E-value=9.2e-29  Score=242.18  Aligned_cols=177  Identities=38%  Similarity=0.683  Sum_probs=139.9

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.||+|+||+|+||+++. +.+||+|||++......  .......++..|+|||.+.+...++.++||
T Consensus       106 ~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di  182 (282)
T cd07831         106 MYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSK--PPYTEYISTRWYRAPECLLTDGYYGPKMDI  182 (282)
T ss_pred             HHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccC--CCcCCCCCCcccCChhHhhcCCCCCcchhH
Confidence            368999999999999999999999999999 99999999998765432  223345678999999987655567889999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|.+||.+.+..+.+..+....+.+...............+.........+......++..+.+||.+|
T Consensus       183 ~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  262 (282)
T cd07831         183 WAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKL  262 (282)
T ss_pred             HHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHH
Confidence            99999999999999999999988888888888887776543322211111111111112233444567899999999999


Q ss_pred             cCCCCCCCcCHHHHHhcccc
Q 012191          161 LSVEPYKRATASAALASEYF  180 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F  180 (468)
                      |..||.+|||+.++|.||||
T Consensus       263 l~~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         263 LAYDPDERITAKQALRHPYF  282 (282)
T ss_pred             hccCcccccCHHHHhhCCCC
Confidence            99999999999999999998


No 60 
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the 
Probab=99.96  E-value=7.3e-29  Score=251.77  Aligned_cols=159  Identities=33%  Similarity=0.505  Sum_probs=129.2

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCC----------------------------CCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH----------------------------RQP   52 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~----------------------------~~~   52 (468)
                      +.||+.||+|||++||+||||||+||||+.++.+||+|||++.......                            ...
T Consensus       107 ~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (350)
T cd05573         107 IAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVR  186 (350)
T ss_pred             HHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccccccccccccccccccccccccccccc
Confidence            4699999999999999999999999999999999999999987654432                            112


Q ss_pred             ccccccCCcccChhhhcCCCCCCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccC
Q 012191           53 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLF  132 (468)
Q Consensus        53 ~~~~~gt~~Y~APE~l~g~~~~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~  132 (468)
                      .....||+.|+|||++.+. .++.++||||||||||+|++|..||.+.+.......+........        +      
T Consensus       187 ~~~~~gt~~y~aPE~~~~~-~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~--------~------  251 (350)
T cd05573         187 ANSTVGTPDYIAPEVLRGT-PYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLR--------F------  251 (350)
T ss_pred             ccccccCccccCHHHHcCC-CCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCccc--------C------
Confidence            3345789999999999874 689999999999999999999999998887776666644111110        0      


Q ss_pred             CCCCCCCchhhhhcCCCcHHHHHHHHHhcCCCCCCCcC-HHHHHhcccccCCCCC
Q 012191          133 KPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRAT-ASAALASEYFSTKPYA  186 (468)
Q Consensus       133 ~~~~~~~~~l~~~~~~~s~~l~dLL~~mL~~DP~kRpT-a~e~L~Hp~F~~~p~~  186 (468)
                                 .....+++.+.+||.+||. ||.+|++ +.++|.||||....|.
T Consensus       252 -----------p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~~~~  294 (350)
T cd05573         252 -----------PPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGIDWE  294 (350)
T ss_pred             -----------CCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCCCHH
Confidence                       0012378999999999997 9999999 9999999999876553


No 61 
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.96  E-value=5.3e-29  Score=251.70  Aligned_cols=155  Identities=26%  Similarity=0.384  Sum_probs=126.6

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||+|||++||+||||||+|||++.++.++|+|||++....... ......+||+.|+|||++.+...++.++||
T Consensus       102 ~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~Dv  180 (330)
T cd05586         102 IAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDN-KTTNTFCGTTEYLAPEVLLDEKGYTKHVDF  180 (330)
T ss_pred             HHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-CCccCccCCccccCHHHHcCCCCCCCccce
Confidence            4699999999999999999999999999999999999999986533221 223455789999999999876668999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|..||.+.+..+.+..+.......+                            ...++.++.+||.+|
T Consensus       181 wslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~----------------------------~~~~~~~~~~li~~~  232 (330)
T cd05586         181 WSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFP----------------------------KNVLSDEGRQFVKGL  232 (330)
T ss_pred             eccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCC----------------------------CccCCHHHHHHHHHH
Confidence            9999999999999999988776666555532110000                            023678899999999


Q ss_pred             cCCCCCCCc----CHHHHHhcccccCCC
Q 012191          161 LSVEPYKRA----TASAALASEYFSTKP  184 (468)
Q Consensus       161 L~~DP~kRp----Ta~e~L~Hp~F~~~p  184 (468)
                      |..||.+||    ++.++++||||....
T Consensus       233 L~~~P~~R~~~~~~~~~ll~h~~~~~~~  260 (330)
T cd05586         233 LNRNPQHRLGAHRDAVELKEHPFFADID  260 (330)
T ss_pred             cCCCHHHCCCCCCCHHHHhcCccccCCC
Confidence            999999998    799999999998644


No 62 
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic 
Probab=99.96  E-value=1.2e-28  Score=244.68  Aligned_cols=180  Identities=48%  Similarity=0.887  Sum_probs=143.9

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC----------CCccccccCCcccChhhhcC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR----------QPLTSRVVTLWYRPPELLLG   70 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~----------~~~~~~~gt~~Y~APE~l~g   70 (468)
                      +.||+.||.|||++||+|+||||+|||++.++.++|+|||++........          ...+...+++.|+|||.+.+
T Consensus       121 ~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  200 (311)
T cd07866         121 MLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLG  200 (311)
T ss_pred             HHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhC
Confidence            46999999999999999999999999999999999999999875443211          11233466888999999877


Q ss_pred             CCCCCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccC-CCccccCCCCCCCCchhhhhcCCC
Q 012191           71 ATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSK-LPHATLFKPQQPYDSSLRETFKDL  149 (468)
Q Consensus        71 ~~~~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~  149 (468)
                      ...++.++||||||||+|+|++|.+||.+.+.......+...++.+....|.... ++..............+...+..+
T Consensus       201 ~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (311)
T cd07866         201 ERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKL  280 (311)
T ss_pred             CCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccC
Confidence            5668899999999999999999999999999999999999988888776665422 121111111122233455566778


Q ss_pred             cHHHHHHHHHhcCCCCCCCcCHHHHHhcccc
Q 012191          150 PTTAVNLIETLLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       150 s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      ...+.+||.+||..||.+|||+.++|.||||
T Consensus       281 ~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         281 GPEGLDLLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             ChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence            8899999999999999999999999999998


No 63 
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96  E-value=6.3e-29  Score=251.38  Aligned_cols=164  Identities=27%  Similarity=0.426  Sum_probs=130.9

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC---CCccccccCCcccChhhh-cCCCCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR---QPLTSRVVTLWYRPPELL-LGATDYGP   76 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~---~~~~~~~gt~~Y~APE~l-~g~~~~s~   76 (468)
                      ++++|.||.|||.+|.||||||+.||||+.+|.|||+|||..-.+.....   ..+...+||++|+|||++ .....|+.
T Consensus       132 Lre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdf  211 (516)
T KOG0582|consen  132 LREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDF  211 (516)
T ss_pred             HHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccc
Confidence            47899999999999999999999999999999999999998754443321   112456899999999994 44567999


Q ss_pred             CcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHH
Q 012191           77 SVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNL  156 (468)
Q Consensus        77 ~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dL  156 (468)
                      ++||||||++..||.+|..||........+..  ++.+.||.....                 ..-.+....++..++.+
T Consensus       212 KaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~--tLqn~pp~~~t~-----------------~~~~d~~k~~~ksf~e~  272 (516)
T KOG0582|consen  212 KADIWSFGITACELAHGHAPFSKYPPMKVLLL--TLQNDPPTLLTS-----------------GLDKDEDKKFSKSFREM  272 (516)
T ss_pred             hhhhhhhhHHHHHHhcCCCCcccCChHHHHHH--HhcCCCCCcccc-----------------cCChHHhhhhcHHHHHH
Confidence            99999999999999999999988777665543  344555422100                 00022335677899999


Q ss_pred             HHHhcCCCCCCCcCHHHHHhcccccCC
Q 012191          157 IETLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       157 L~~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      |..||..||.+||||+++|.|+||+..
T Consensus       273 i~~CL~kDP~kRptAskLlkh~FFk~~  299 (516)
T KOG0582|consen  273 IALCLVKDPSKRPTASKLLKHAFFKKA  299 (516)
T ss_pred             HHHHhhcCcccCCCHHHHhccHHHhhc
Confidence            999999999999999999999999874


No 64 
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.96  E-value=8.4e-29  Score=250.68  Aligned_cols=150  Identities=27%  Similarity=0.399  Sum_probs=125.5

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      .||+.||+|||++||+||||||+|||++.++.+||+|||++......    .....||+.|+|||++.+ ..++.++|||
T Consensus       125 ~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~~Diw  199 (329)
T PTZ00263        125 AELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR----TFTLCGTPEYLAPEVIQS-KGHGKAVDWW  199 (329)
T ss_pred             HHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC----cceecCChhhcCHHHHcC-CCCCCcceee
Confidence            68999999999999999999999999999999999999999765432    234578999999999976 4578999999


Q ss_pred             eeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhc
Q 012191           82 SVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLL  161 (468)
Q Consensus        82 SLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL  161 (468)
                      ||||++|+|++|.+||.+.+....+..+...  .+.                           ....++..+.+||.+||
T Consensus       200 slG~il~elltg~~pf~~~~~~~~~~~i~~~--~~~---------------------------~p~~~~~~~~~li~~~L  250 (329)
T PTZ00263        200 TMGVLLYEFIAGYPPFFDDTPFRIYEKILAG--RLK---------------------------FPNWFDGRARDLVKGLL  250 (329)
T ss_pred             chHHHHHHHHcCCCCCCCCCHHHHHHHHhcC--CcC---------------------------CCCCCCHHHHHHHHHHh
Confidence            9999999999999999988776666665431  110                           00236788999999999


Q ss_pred             CCCCCCCcC-----HHHHHhcccccCCCC
Q 012191          162 SVEPYKRAT-----ASAALASEYFSTKPY  185 (468)
Q Consensus       162 ~~DP~kRpT-----a~e~L~Hp~F~~~p~  185 (468)
                      +.||.+|++     +.+++.||||....|
T Consensus       251 ~~dP~~R~~~~~~~~~~ll~hp~f~~~~~  279 (329)
T PTZ00263        251 QTDHTKRLGTLKGGVADVKNHPYFHGANW  279 (329)
T ss_pred             hcCHHHcCCCCCCCHHHHhcCCccCCCCH
Confidence            999999997     799999999987544


No 65 
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.96  E-value=1.2e-28  Score=253.94  Aligned_cols=160  Identities=28%  Similarity=0.428  Sum_probs=130.3

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCC---CCCCCCc
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGA---TDYGPSV   78 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~---~~~s~~s   78 (468)
                      .||+.||+|||++||+||||||+|||++.++.+||+|||++..............+||+.|+|||++.+.   ..++.++
T Consensus       149 ~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~  228 (370)
T cd05596         149 AEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGREC  228 (370)
T ss_pred             HHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCce
Confidence            6899999999999999999999999999999999999999976554322233456789999999998653   2478899


Q ss_pred             ceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           79 DLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        79 DIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |||||||++|+|++|.+||.+.+....+..+........                    +     .....++.++.+||.
T Consensus       229 DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~--------------------~-----~~~~~~s~~~~~li~  283 (370)
T cd05596         229 DWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLT--------------------F-----PDDIEISKQAKDLIC  283 (370)
T ss_pred             eeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCC--------------------C-----CCcCCCCHHHHHHHH
Confidence            999999999999999999999887777766654211110                    0     011247899999999


Q ss_pred             HhcCCCCCC--CcCHHHHHhcccccCCCCC
Q 012191          159 TLLSVEPYK--RATASAALASEYFSTKPYA  186 (468)
Q Consensus       159 ~mL~~DP~k--RpTa~e~L~Hp~F~~~p~~  186 (468)
                      +||..+|.+  |+|+.++|+||||+...|.
T Consensus       284 ~~L~~~p~r~~R~s~~ell~h~~~~~~~~~  313 (370)
T cd05596         284 AFLTDREVRLGRNGVDEIKSHPFFKNDQWT  313 (370)
T ss_pred             HHccChhhccCCCCHHHHhcCcccCCCChh
Confidence            999999988  9999999999999986553


No 66 
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is 
Probab=99.95  E-value=1.7e-28  Score=243.06  Aligned_cols=185  Identities=45%  Similarity=0.794  Sum_probs=147.5

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+|+||+|+|||++.++.++|+|||++....... .......+++.|+|||.+.+...++.++||
T Consensus       108 ~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv  186 (298)
T cd07841         108 MLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN-RKMTHQVVTRWYRAPELLFGARHYGVGVDM  186 (298)
T ss_pred             HHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC-ccccccccceeeeCHHHHhCCCCCCcHHHH
Confidence            3699999999999999999999999999999999999999987654332 222334567889999998765668899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccC-CCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSK-LPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++|.++|.+....+.+.+++..++.+....|.... ......+  .......+...+..++..+.+||.+
T Consensus       187 ~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~li~~  264 (298)
T cd07841         187 WSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEF--KPFPPTPLKQIFPAASDDALDLLQR  264 (298)
T ss_pred             HHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccc--cccCCcchhhhcccccHHHHHHHHH
Confidence            999999999999999999988888888888888877776665421 1111111  1111223344556778999999999


Q ss_pred             hcCCCCCCCcCHHHHHhcccccCCCCCCC
Q 012191          160 LLSVEPYKRATASAALASEYFSTKPYACD  188 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~Hp~F~~~p~~~~  188 (468)
                      ||.+||.+|||+.++|.|+||...+.+..
T Consensus       265 ~l~~~P~~R~s~~e~l~~~~~~~~~~~~~  293 (298)
T cd07841         265 LLTLNPNKRITARQALEHPYFSNDPAPTP  293 (298)
T ss_pred             HhcCCcccCcCHHHHhhCccccCCCCCCC
Confidence            99999999999999999999999776543


No 67 
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.95  E-value=6.8e-29  Score=246.55  Aligned_cols=151  Identities=27%  Similarity=0.403  Sum_probs=126.7

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||+|||++||+||||||+|||++.++.+||+|||++......    ....+||+.|+|||++.+ ..++.++||
T Consensus       107 ~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~~Di  181 (291)
T cd05612         107 ASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR----TWTLCGTPEYLAPEVIQS-KGHNKAVDW  181 (291)
T ss_pred             HHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC----cccccCChhhcCHHHHcC-CCCCchhhH
Confidence            368999999999999999999999999999999999999998765432    234578999999999876 457899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|..||.+.+..+....+....-.                             ....++..+++||.+|
T Consensus       182 wSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~-----------------------------~~~~~~~~~~~li~~~  232 (291)
T cd05612         182 WALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLE-----------------------------FPRHLDLYAKDLIKKL  232 (291)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcC-----------------------------CCccCCHHHHHHHHHH
Confidence            99999999999999999988877766666432100                             0124578899999999


Q ss_pred             cCCCCCCCcC-----HHHHHhcccccCCCC
Q 012191          161 LSVEPYKRAT-----ASAALASEYFSTKPY  185 (468)
Q Consensus       161 L~~DP~kRpT-----a~e~L~Hp~F~~~p~  185 (468)
                      |+.||.+|++     +.+++.||||....|
T Consensus       233 l~~dp~~R~~~~~~~~~~~l~h~~~~~~~~  262 (291)
T cd05612         233 LVVDRTRRLGNMKNGADDVKNHRWFKSVDW  262 (291)
T ss_pred             cCCCHHHccCCccCCHHHHhcCccccCCCH
Confidence            9999999995     999999999987555


No 68 
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95  E-value=5.5e-29  Score=262.87  Aligned_cols=153  Identities=29%  Similarity=0.472  Sum_probs=133.2

Q ss_pred             HHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcceee
Q 012191            3 QLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWS   82 (468)
Q Consensus         3 QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIWS   82 (468)
                      .|+.||+|||++||||||||.+|||+|.+|.+||+|||+++..... .......+||+.|+|||++.+ ..|+.++|.|+
T Consensus       476 ev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~-g~~TsTfCGTpey~aPEil~e-~~Yt~aVDWW~  553 (694)
T KOG0694|consen  476 EVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ-GDRTSTFCGTPEFLAPEVLTE-QSYTRAVDWWG  553 (694)
T ss_pred             HHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCC-CCccccccCChhhcChhhhcc-CcccchhhHHH
Confidence            5889999999999999999999999999999999999999754322 234567899999999999988 56999999999


Q ss_pred             eehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhcC
Q 012191           83 VGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLS  162 (468)
Q Consensus        83 LG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL~  162 (468)
                      |||+|||||.|.+||.|+++.+....|...--..|                             ..++.++.++|++||.
T Consensus       554 lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP-----------------------------~~ls~ea~~il~~ll~  604 (694)
T KOG0694|consen  554 LGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYP-----------------------------RFLSKEAIAIMRRLLR  604 (694)
T ss_pred             HHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCC-----------------------------CcccHHHHHHHHHHhc
Confidence            99999999999999999999999999865321111                             2478999999999999


Q ss_pred             CCCCCCcC-----HHHHHhcccccCCCCC
Q 012191          163 VEPYKRAT-----ASAALASEYFSTKPYA  186 (468)
Q Consensus       163 ~DP~kRpT-----a~e~L~Hp~F~~~p~~  186 (468)
                      .||++|..     +.++..||||+...|.
T Consensus       605 k~p~kRLG~~e~d~~~i~~hpFFr~i~w~  633 (694)
T KOG0694|consen  605 KNPEKRLGSGERDAEDIKKHPFFRSIDWD  633 (694)
T ss_pred             cCcccccCCCCCCchhhhhCCccccCCHH
Confidence            99999975     5889999999998774


No 69 
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.95  E-value=1.4e-28  Score=251.11  Aligned_cols=183  Identities=32%  Similarity=0.603  Sum_probs=140.9

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||+|||++||+|+||||+|||++.++.+||+|||++......  .......++..|+|||.+.+ ..++.++||
T Consensus       124 ~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv  200 (353)
T cd07850         124 LYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS--FMMTPYVVTRYYRAPEVILG-MGYKENVDI  200 (353)
T ss_pred             HHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCC--CCCCCCcccccccCHHHHhC-CCCCCchhh
Confidence            469999999999999999999999999999999999999999765432  22334567889999999976 568999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCC--------------CCCchhhhhc
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQ--------------PYDSSLRETF  146 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~--------------~~~~~l~~~~  146 (468)
                      |||||++|+|++|..||.+.+....+..+...++.++.+++...............              .+........
T Consensus       201 wslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (353)
T cd07850         201 WSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHN  280 (353)
T ss_pred             HhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCccccccc
Confidence            99999999999999999999888889999988888877654432211110000000              0000001112


Q ss_pred             CCCcHHHHHHHHHhcCCCCCCCcCHHHHHhcccccCCCCC
Q 012191          147 KDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYA  186 (468)
Q Consensus       147 ~~~s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~p~~  186 (468)
                      ...+..+++||.+||..||.+|||+.++|.||||..+-.+
T Consensus       281 ~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~~~~  320 (353)
T cd07850         281 KLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVWYDP  320 (353)
T ss_pred             ccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhccCC
Confidence            2456778999999999999999999999999999865443


No 70 
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. 
Probab=99.95  E-value=1.5e-28  Score=248.78  Aligned_cols=159  Identities=28%  Similarity=0.445  Sum_probs=129.3

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+||||||+|||++.++.+||+|||++.....    .....+||+.|+|||++.+. .++.++||
T Consensus       107 ~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~----~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv  181 (333)
T cd05600         107 MAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT----YANSVVGSPDYMAPEVLRGK-GYDFTVDY  181 (333)
T ss_pred             HHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc----ccCCcccCccccChhHhcCC-CCCCccce
Confidence            36999999999999999999999999999999999999999875543    23456789999999999874 68999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|.+||.+.+..+.+..+...........+                     ......++.++.+||.+|
T Consensus       182 wslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~---------------------~~~~~~~s~~~~~li~~~  240 (333)
T cd05600         182 WSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVY---------------------DDPRFNLSDEAWDLITKL  240 (333)
T ss_pred             ecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCC---------------------CccccccCHHHHHHHHHH
Confidence            99999999999999999988877766665432111100000                     000135788999999999


Q ss_pred             cCCCCCCCcCHHHHHhcccccCCCC
Q 012191          161 LSVEPYKRATASAALASEYFSTKPY  185 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F~~~p~  185 (468)
                      |..+|.+|||+.+++.||||....+
T Consensus       241 l~~~~~rr~s~~~ll~h~~~~~~~~  265 (333)
T cd05600         241 INDPSRRFGSLEDIKNHPFFKEVDW  265 (333)
T ss_pred             hhChhhhcCCHHHHHhCcccCCCCH
Confidence            9999999999999999999997655


No 71 
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.95  E-value=1e-28  Score=249.13  Aligned_cols=154  Identities=27%  Similarity=0.435  Sum_probs=127.6

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||+|||++||+||||||+|||++.++.+||+|||++....... .......||+.|+|||++.+ ..++.++||
T Consensus       102 ~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di  179 (320)
T cd05590         102 AAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG-KTTSTFCGTPDYIAPEILQE-MLYGPSVDW  179 (320)
T ss_pred             HHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC-CcccccccCccccCHHHHcC-CCCCCccch
Confidence            3699999999999999999999999999999999999999986533221 22344578999999999876 468899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|..||.+.+..+.+..+.......                             ...++.++.+||.+|
T Consensus       180 wslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~-----------------------------~~~~~~~~~~li~~~  230 (320)
T cd05590         180 WAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVY-----------------------------PTWLSQDAVDILKAF  230 (320)
T ss_pred             hhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCC-----------------------------CCCCCHHHHHHHHHH
Confidence            999999999999999999988877776664311100                             123678899999999


Q ss_pred             cCCCCCCCcCH------HHHHhcccccCCCC
Q 012191          161 LSVEPYKRATA------SAALASEYFSTKPY  185 (468)
Q Consensus       161 L~~DP~kRpTa------~e~L~Hp~F~~~p~  185 (468)
                      |+.||.+|+++      .+++.||||....|
T Consensus       231 L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~  261 (320)
T cd05590         231 MTKNPTMRLGSLTLGGEEAILRHPFFKELDW  261 (320)
T ss_pred             cccCHHHCCCCCCCCCHHHHHcCCCcCCCCH
Confidence            99999999998      99999999987544


No 72 
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.95  E-value=1e-28  Score=256.40  Aligned_cols=183  Identities=25%  Similarity=0.358  Sum_probs=135.5

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC-CccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +.||+.||.|||++||+||||||+|||++.++.++|+|||++......... .....+||+.|+|||++.+ ..|+.++|
T Consensus       191 ~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~D  269 (392)
T PHA03207        191 QRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLAL-DPYCAKTD  269 (392)
T ss_pred             HHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccccccccccccccCccCHhHhcC-CCCCchhh
Confidence            369999999999999999999999999999999999999998765433221 2234578999999999876 45889999


Q ss_pred             eeeeehhhhhhhhcCCCCCCCc---hHHHHHHHHHHcCCCCchhhhccCCCcc-----ccCCCCCCCCchhhhh--cCCC
Q 012191           80 LWSVGCVFAELLIGKPILQGRT---EVEQLHKIFKLCGSPPDDYWKKSKLPHA-----TLFKPQQPYDSSLRET--FKDL  149 (468)
Q Consensus        80 IWSLG~ILyeLltG~~pf~g~~---~~e~l~~i~~~~g~p~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~--~~~~  149 (468)
                      ||||||++|+|++|..||.+..   ....+..+.+.++..+.++.........     .......++.  +...  -..+
T Consensus       270 vwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  347 (392)
T PHA03207        270 IWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYT--IPPVIRKYGM  347 (392)
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCcc--ccchhhccCc
Confidence            9999999999999999997753   3566777777776655443221100000     0000000110  1111  1246


Q ss_pred             cHHHHHHHHHhcCCCCCCCcCHHHHHhcccccCCCCC
Q 012191          150 PTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYA  186 (468)
Q Consensus       150 s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~p~~  186 (468)
                      +.++.+||.+||.+||.+|||+.++|.||||...|+.
T Consensus       348 ~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~~  384 (392)
T PHA03207        348 HMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPIN  384 (392)
T ss_pred             chhHHHHHHHHhccChhhCCCHHHHhhCchhhccchh
Confidence            7789999999999999999999999999999987653


No 73 
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.95  E-value=1.3e-28  Score=249.29  Aligned_cols=154  Identities=27%  Similarity=0.437  Sum_probs=125.5

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||+|||++||+||||||+|||++.++.+||+|||++...... .......+||+.|+|||++.+ ..++.++||
T Consensus       101 ~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di  178 (328)
T cd05593         101 GAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD-AATMKTFCGTPEYLAPEVLED-NDYGRAVDW  178 (328)
T ss_pred             HHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc-ccccccccCCcCccChhhhcC-CCCCccCCc
Confidence            368999999999999999999999999999999999999998653321 122334578999999999876 468999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|..||.+.+..+....+....  .                           .....++.++.+||.+|
T Consensus       179 wslGvil~elltG~~Pf~~~~~~~~~~~~~~~~--~---------------------------~~p~~~~~~~~~li~~~  229 (328)
T cd05593         179 WGLGVVMYEMMCGRLPFYNQDHEKLFELILMED--I---------------------------KFPRTLSADAKSLLSGL  229 (328)
T ss_pred             cccchHHHHHhhCCCCCCCCCHHHHHHHhccCC--c---------------------------cCCCCCCHHHHHHHHHH
Confidence            999999999999999998877665555442210  0                           00135788999999999


Q ss_pred             cCCCCCCCc-----CHHHHHhcccccCCCC
Q 012191          161 LSVEPYKRA-----TASAALASEYFSTKPY  185 (468)
Q Consensus       161 L~~DP~kRp-----Ta~e~L~Hp~F~~~p~  185 (468)
                      |..||.+|+     ++.++|+|+||....|
T Consensus       230 L~~dP~~R~~~~~~~~~~il~h~~~~~~~~  259 (328)
T cd05593         230 LIKDPNKRLGGGPDDAKEIMRHSFFTGVNW  259 (328)
T ss_pred             cCCCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence            999999997     8999999999987544


No 74 
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.95  E-value=1.5e-28  Score=247.56  Aligned_cols=154  Identities=29%  Similarity=0.436  Sum_probs=127.8

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+||||||+|||++.++.+||+|||++....... .......||+.|+|||++.+ ..++.++||
T Consensus       102 ~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv  179 (321)
T cd05591         102 AAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG-VTTTTFCGTPDYIAPEILQE-LEYGPSVDW  179 (321)
T ss_pred             HHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCC-ccccccccCccccCHHHHcC-CCCCCccce
Confidence            3689999999999999999999999999999999999999986543221 22344578999999999876 468999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|.+||.+.+..+.+..+.......                             ...++.++.+||.+|
T Consensus       180 wslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~-----------------------------p~~~~~~~~~ll~~~  230 (321)
T cd05591         180 WALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLY-----------------------------PVWLSKEAVSILKAF  230 (321)
T ss_pred             echhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC-----------------------------CCCCCHHHHHHHHHH
Confidence            999999999999999999988877777664321000                             013678899999999


Q ss_pred             cCCCCCCCc-------CHHHHHhcccccCCCC
Q 012191          161 LSVEPYKRA-------TASAALASEYFSTKPY  185 (468)
Q Consensus       161 L~~DP~kRp-------Ta~e~L~Hp~F~~~p~  185 (468)
                      |+.||.+|+       ++.+++.||||....|
T Consensus       231 L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~~  262 (321)
T cd05591         231 MTKNPNKRLGCVASQGGEDAIKQHPFFKEIDW  262 (321)
T ss_pred             hccCHHHcCCCCCCCCCHHHHhcCCccCCCCH
Confidence            999999999       9999999999976544


No 75 
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95  E-value=4.9e-29  Score=239.79  Aligned_cols=142  Identities=33%  Similarity=0.528  Sum_probs=121.2

Q ss_pred             CHHHHHHHHHHHh--CC--CeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCC
Q 012191            1 MNQLLHGLEHCHS--RG--VLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGP   76 (468)
Q Consensus         1 m~QLL~gL~yLHs--~g--IvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~   76 (468)
                      |.||+.||.+||+  ..  |+||||||.||+|+.+|.+||+|||+++++... .....+.+|||.||+||++.+ ..|+.
T Consensus       130 f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~-~tfA~S~VGTPyYMSPE~i~~-~~Y~~  207 (375)
T KOG0591|consen  130 FVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSK-TTFAHSLVGTPYYMSPERIHE-SGYNF  207 (375)
T ss_pred             HHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcch-hHHHHhhcCCCcccCHHHHhc-CCCCc
Confidence            4699999999999  44  999999999999999999999999999988753 355678899999999999987 57999


Q ss_pred             CcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHH
Q 012191           77 SVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNL  156 (468)
Q Consensus        77 ~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dL  156 (468)
                      ++||||+||++|||+.-++||.|++-.+.-.+|..+ ..++...                          ..+|.++..|
T Consensus       208 kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qg-d~~~~p~--------------------------~~YS~~l~~l  260 (375)
T KOG0591|consen  208 KSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQG-DYPPLPD--------------------------EHYSTDLREL  260 (375)
T ss_pred             chhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcC-CCCCCcH--------------------------HHhhhHHHHH
Confidence            999999999999999999999999777776676543 2221100                          2468889999


Q ss_pred             HHHhcCCCCCCCcCH
Q 012191          157 IETLLSVEPYKRATA  171 (468)
Q Consensus       157 L~~mL~~DP~kRpTa  171 (468)
                      |..|+..||..||+.
T Consensus       261 i~~ci~vd~~~RP~t  275 (375)
T KOG0591|consen  261 INMCIAVDPEQRPDT  275 (375)
T ss_pred             HHHHccCCcccCCCc
Confidence            999999999999986


No 76 
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.95  E-value=1.4e-28  Score=240.88  Aligned_cols=180  Identities=60%  Similarity=1.064  Sum_probs=148.5

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||+|||+.|++|+||+|+||+++.++.++|+|||++...........+...++..|+|||.+.+...++.++||
T Consensus       106 ~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv  185 (287)
T cd07840         106 MKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDM  185 (287)
T ss_pred             HHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcccccccccccccCCceeeEccccCChHHHH
Confidence            36899999999999999999999999999999999999999976654432233445678899999988765668899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccC-CCccccCCCCCCCCchhhhhcCCC-cHHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSK-LPHATLFKPQQPYDSSLRETFKDL-PTTAVNLIE  158 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~-s~~l~dLL~  158 (468)
                      |||||++|+|++|.+||...+....+..+...++.+....|.... +.....+.+.......+...+... +..+.++|.
T Consensus       186 ~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  265 (287)
T cd07840         186 WSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLD  265 (287)
T ss_pred             HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHH
Confidence            999999999999999999999888999999988888877776432 222233333444444555556665 999999999


Q ss_pred             HhcCCCCCCCcCHHHHHhcccc
Q 012191          159 TLLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      +||..||.+|||+.++|.||||
T Consensus       266 ~~l~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         266 KLLTLDPKKRISADQALQHEYF  287 (287)
T ss_pred             HHcCCChhhCcCHHHHhhCcCC
Confidence            9999999999999999999998


No 77 
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.95  E-value=1.3e-28  Score=251.12  Aligned_cols=152  Identities=28%  Similarity=0.389  Sum_probs=128.0

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+||||||+|||++.++.+||+|||++......    ....+||+.|+|||++.+ ..++.++||
T Consensus       137 ~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~~Di  211 (340)
T PTZ00426        137 AAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR----TYTLCGTPEYIAPEILLN-VGHGKAADW  211 (340)
T ss_pred             HHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC----cceecCChhhcCHHHHhC-CCCCccccc
Confidence            369999999999999999999999999999999999999999765432    234578999999999976 457899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||||||+|+|++|.+||.+.+.......+.......                             ...++..+.+||.+|
T Consensus       212 wSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~-----------------------------p~~~~~~~~~li~~~  262 (340)
T PTZ00426        212 WTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYF-----------------------------PKFLDNNCKHLMKKL  262 (340)
T ss_pred             cchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCC-----------------------------CCCCCHHHHHHHHHH
Confidence            999999999999999999888776666664321111                             124678899999999


Q ss_pred             cCCCCCCCc-----CHHHHHhcccccCCCCC
Q 012191          161 LSVEPYKRA-----TASAALASEYFSTKPYA  186 (468)
Q Consensus       161 L~~DP~kRp-----Ta~e~L~Hp~F~~~p~~  186 (468)
                      |+.||.+|+     |+.++++||||....|.
T Consensus       263 l~~dp~~R~~~~~~~~~~~~~hp~f~~~~~~  293 (340)
T PTZ00426        263 LSHDLTKRYGNLKKGAQNVKEHPWFGNIDWV  293 (340)
T ss_pred             cccCHHHcCCCCCCCHHHHHcCCCcCCCCHH
Confidence            999999995     89999999999976553


No 78 
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.95  E-value=2.2e-28  Score=241.90  Aligned_cols=179  Identities=48%  Similarity=0.838  Sum_probs=142.9

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||+|||+.||+|+||||+|||++.++.++|+|||++....... .......+++.|+|||.+.+...++.++||
T Consensus       112 ~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di  190 (293)
T cd07843         112 MLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL-KPYTQLVVTLWYRAPELLLGAKEYSTAIDM  190 (293)
T ss_pred             HHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc-cccccccccccccCchhhcCCccccchhhH
Confidence            3689999999999999999999999999999999999999987655432 223345678899999998775567889999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhcc-CCCccccCCCCCCCCchhhhhcCC--CcHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKS-KLPHATLFKPQQPYDSSLRETFKD--LPTTAVNLI  157 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~--~s~~l~dLL  157 (468)
                      |||||++|+|++|.+||.+......+.+++..++.+....|... .++..............+...++.  ++..+.+||
T Consensus       191 ~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  270 (293)
T cd07843         191 WSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLL  270 (293)
T ss_pred             HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHH
Confidence            99999999999999999999999999999999998888777643 222211111111111223344444  488999999


Q ss_pred             HHhcCCCCCCCcCHHHHHhcccc
Q 012191          158 ETLLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       158 ~~mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      .+||+.||++|||+.|+|.||||
T Consensus       271 ~~~l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         271 NRLLTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             HHHhccCccccCCHHHHhcCCCC
Confidence            99999999999999999999998


No 79 
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.95  E-value=2.7e-28  Score=246.63  Aligned_cols=191  Identities=46%  Similarity=0.868  Sum_probs=151.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCC-------------CCCccccccCCcccChhh
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH-------------RQPLTSRVVTLWYRPPEL   67 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~-------------~~~~~~~~gt~~Y~APE~   67 (468)
                      +.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++.......             ........++..|+|||.
T Consensus       125 ~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~  204 (335)
T PTZ00024        125 LLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPEL  204 (335)
T ss_pred             HHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChh
Confidence            3699999999999999999999999999999999999999987654110             112223456888999999


Q ss_pred             hcCCCCCCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccC-CCccccCCCCCCCCchhhhhc
Q 012191           68 LLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSK-LPHATLFKPQQPYDSSLRETF  146 (468)
Q Consensus        68 l~g~~~~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~  146 (468)
                      +.+...++.++|||||||++|+|++|.+||.+.+..+.+..++..++.+....|.... ++....+...  ....+...+
T Consensus       205 ~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  282 (335)
T PTZ00024        205 LMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPR--KPKDLKTIF  282 (335)
T ss_pred             cccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcC--CcccHHHhC
Confidence            9776667899999999999999999999999999999999999988888776665421 1111111111  112334455


Q ss_pred             CCCcHHHHHHHHHhcCCCCCCCcCHHHHHhcccccCCCCCCCCCCCC
Q 012191          147 KDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYACDLSSLP  193 (468)
Q Consensus       147 ~~~s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~p~~~~~~~~p  193 (468)
                      ...+..+.+||.+||..||.+|||++++|.||||+..+..+++..+|
T Consensus       283 ~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~~~~~~~~~~  329 (335)
T PTZ00024        283 PNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDPLPCDPSQLP  329 (335)
T ss_pred             cCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCCCCCCcccCC
Confidence            67789999999999999999999999999999999988877755443


No 80 
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex 
Probab=99.95  E-value=1.6e-28  Score=241.39  Aligned_cols=178  Identities=42%  Similarity=0.759  Sum_probs=140.0

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||+|||+.|++|+||+|+||+++.++.++|+|||++....... .......++..|+|||.+.+...++.++||
T Consensus       106 ~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv  184 (284)
T cd07860         106 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLGCKYYSTAVDI  184 (284)
T ss_pred             HHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc-cccccccccccccCCeEEecCCCCCcHHHH
Confidence            3689999999999999999999999999999999999999987554321 223344568899999998775557889999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCC-CccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKL-PHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++|..||.+.++...+.+++...+.+....|..... +.....-+.. ....+....+.++..+++||.+
T Consensus       185 ~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~  263 (284)
T cd07860         185 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKW-ARQDFSKVVPPLDEDGRDLLSQ  263 (284)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccc-cccCHHHHcccCCHHHHHHHHH
Confidence            9999999999999999999998888888888888887766643211 1000000000 1122334455688999999999


Q ss_pred             hcCCCCCCCcCHHHHHhcccc
Q 012191          160 LLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      ||+.||.+|||+.++|.||||
T Consensus       264 ~l~~~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         264 MLHYDPNKRISAKAALAHPFF  284 (284)
T ss_pred             hcCCCcccCCCHHHHhcCCCC
Confidence            999999999999999999998


No 81 
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.95  E-value=1.9e-28  Score=247.32  Aligned_cols=153  Identities=26%  Similarity=0.443  Sum_probs=125.0

Q ss_pred             HHHHHHHHHHHh-CCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHS-RGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs-~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.||.|||+ .||+||||||+|||++.++.+||+|||++....... .......||+.|+|||++.+ ..++.++||
T Consensus       102 ~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di  179 (325)
T cd05594         102 AEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG-ATMKTFCGTPEYLAPEVLED-NDYGRAVDW  179 (325)
T ss_pred             HHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC-cccccccCCcccCCHHHHcc-CCCCCcccc
Confidence            699999999997 799999999999999999999999999986533221 22334578999999999976 468999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|..||.+.+.......+......                             ....+++++.+||.+|
T Consensus       180 wslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~-----------------------------~p~~~~~~~~~li~~~  230 (325)
T cd05594         180 WGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR-----------------------------FPRTLSPEAKSLLSGL  230 (325)
T ss_pred             ccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCC-----------------------------CCCCCCHHHHHHHHHH
Confidence            99999999999999999887766555554321100                             0124688899999999


Q ss_pred             cCCCCCCCc-----CHHHHHhcccccCCCC
Q 012191          161 LSVEPYKRA-----TASAALASEYFSTKPY  185 (468)
Q Consensus       161 L~~DP~kRp-----Ta~e~L~Hp~F~~~p~  185 (468)
                      |..||.+|+     ++.++|+||||....|
T Consensus       231 L~~dP~~R~~~~~~~~~~il~h~~~~~~~~  260 (325)
T cd05594         231 LKKDPKQRLGGGPDDAKEIMQHKFFAGIVW  260 (325)
T ss_pred             hhcCHHHhCCCCCCCHHHHhcCCCcCCCCH
Confidence            999999997     9999999999987543


No 82 
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found 
Probab=99.95  E-value=4.1e-28  Score=250.32  Aligned_cols=159  Identities=28%  Similarity=0.407  Sum_probs=127.7

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCC---CCCCCc
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGAT---DYGPSV   78 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~---~~s~~s   78 (468)
                      .||+.||+|||++||+||||||+|||++.++.+||+|||++..............+||+.|+|||++.+..   .++.++
T Consensus       149 ~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~  228 (370)
T cd05621         149 AEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGREC  228 (370)
T ss_pred             HHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCccc
Confidence            68999999999999999999999999999999999999999766543322334567899999999997532   378899


Q ss_pred             ceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           79 DLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        79 DIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |||||||++|+|++|.+||.+.+....+..+.........                         .....++..+++||.
T Consensus       229 DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~-------------------------p~~~~~s~~~~~li~  283 (370)
T cd05621         229 DWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNF-------------------------PEDVEISKHAKNLIC  283 (370)
T ss_pred             CEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCC-------------------------CCcccCCHHHHHHHH
Confidence            9999999999999999999998887777776542211110                         001246888999999


Q ss_pred             HhcCCCCCC--CcCHHHHHhcccccCCCC
Q 012191          159 TLLSVEPYK--RATASAALASEYFSTKPY  185 (468)
Q Consensus       159 ~mL~~DP~k--RpTa~e~L~Hp~F~~~p~  185 (468)
                      .||..++.+  |+|+.++|+||||+...|
T Consensus       284 ~~L~~~~~r~~R~~~~e~l~hp~~~~~~~  312 (370)
T cd05621         284 AFLTDREVRLGRNGVEEIKQHPFFKNDQW  312 (370)
T ss_pred             HHccCchhccCCCCHHHHhcCcccCCCCc
Confidence            999865543  899999999999987544


No 83 
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.95  E-value=1.8e-28  Score=246.94  Aligned_cols=153  Identities=29%  Similarity=0.498  Sum_probs=124.9

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      .||+.||+|||++||+||||||+|||++.++.++|+|||++...... .......+||+.|+|||++.+ ..++.++|||
T Consensus       103 ~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Diw  180 (316)
T cd05620         103 AEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG-DNRASTFCGTPDYIAPEILQG-LKYTFSVDWW  180 (316)
T ss_pred             HHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccC-CCceeccCCCcCccCHHHHcC-CCCCcccchh
Confidence            69999999999999999999999999999999999999998643221 122345678999999999976 4689999999


Q ss_pred             eeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhc
Q 012191           82 SVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLL  161 (468)
Q Consensus        82 SLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL  161 (468)
                      ||||++|+|++|..||.+.+..+.+..+....  +.                           ....++.++.+||.+||
T Consensus       181 slGvil~el~~g~~Pf~~~~~~~~~~~~~~~~--~~---------------------------~~~~~~~~~~~li~~~l  231 (316)
T cd05620         181 SFGVLLYEMLIGQSPFHGDDEDELFESIRVDT--PH---------------------------YPRWITKESKDILEKLF  231 (316)
T ss_pred             hhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CC---------------------------CCCCCCHHHHHHHHHHc
Confidence            99999999999999999887766665553211  10                           00236788999999999


Q ss_pred             CCCCCCCcCH-HHHHhcccccCCCC
Q 012191          162 SVEPYKRATA-SAALASEYFSTKPY  185 (468)
Q Consensus       162 ~~DP~kRpTa-~e~L~Hp~F~~~p~  185 (468)
                      ..||.+|+++ +++++||||....+
T Consensus       232 ~~dP~~R~~~~~~~~~h~~f~~~~~  256 (316)
T cd05620         232 ERDPTRRLGVVGNIRGHPFFKTINW  256 (316)
T ss_pred             cCCHHHcCCChHHHHcCCCcCCCCH
Confidence            9999999997 58889999987543


No 84 
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.95  E-value=2.9e-28  Score=245.95  Aligned_cols=154  Identities=29%  Similarity=0.480  Sum_probs=126.9

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+||||||+|||++.++.+||+|||++....... .......||+.|+|||++.+ ..++.++||
T Consensus       106 ~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di  183 (323)
T cd05584         106 LSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG-TVTHTFCGTIEYMAPEILMR-SGHGKAVDW  183 (323)
T ss_pred             HHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC-CcccccCCCccccChhhccC-CCCCCccee
Confidence            3699999999999999999999999999999999999999986433221 22334578999999999876 457899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|.+||.+.+....+..+......                             ....++..+.+||.+|
T Consensus       184 wslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~li~~~  234 (323)
T cd05584         184 WSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLN-----------------------------LPPYLTPEARDLLKKL  234 (323)
T ss_pred             cccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC-----------------------------CCCCCCHHHHHHHHHH
Confidence            99999999999999999988777666665431100                             1134678899999999


Q ss_pred             cCCCCCCCc-----CHHHHHhcccccCCCC
Q 012191          161 LSVEPYKRA-----TASAALASEYFSTKPY  185 (468)
Q Consensus       161 L~~DP~kRp-----Ta~e~L~Hp~F~~~p~  185 (468)
                      |..||.+||     ++.+++.||||....|
T Consensus       235 l~~~p~~R~~~~~~~~~~l~~h~~~~~~~~  264 (323)
T cd05584         235 LKRNPSSRLGAGPGDAAEVQSHPFFRHVNW  264 (323)
T ss_pred             cccCHhHcCCCCCCCHHHHhcCCCcCCCCH
Confidence            999999999     8999999999987543


No 85 
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.95  E-value=2.2e-28  Score=246.34  Aligned_cols=154  Identities=29%  Similarity=0.503  Sum_probs=126.2

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ......+||+.|+|||++.+ ..++.++||
T Consensus       102 ~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv  179 (316)
T cd05592         102 AAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-GKASTFCGTPDYIAPEILKG-QKYNESVDW  179 (316)
T ss_pred             HHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-CccccccCCccccCHHHHcC-CCCCCcccc
Confidence            3699999999999999999999999999999999999999987543222 22344578999999999976 458899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|..||.+.+..+.+..+....  +.                           ....++.++.+||.+|
T Consensus       180 wslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~--~~---------------------------~~~~~~~~~~~ll~~~  230 (316)
T cd05592         180 WSFGVLLYEMLIGQSPFHGEDEDELFDSILNDR--PH---------------------------FPRWISKEAKDCLSKL  230 (316)
T ss_pred             hhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC--CC---------------------------CCCCCCHHHHHHHHHH
Confidence            999999999999999999888776666553211  00                           0024678899999999


Q ss_pred             cCCCCCCCcCH-HHHHhcccccCCCC
Q 012191          161 LSVEPYKRATA-SAALASEYFSTKPY  185 (468)
Q Consensus       161 L~~DP~kRpTa-~e~L~Hp~F~~~p~  185 (468)
                      |..||.+||++ .++++||||....|
T Consensus       231 l~~~P~~R~~~~~~l~~h~~~~~~~~  256 (316)
T cd05592         231 FERDPTKRLGVDGDIRQHPFFRGIDW  256 (316)
T ss_pred             ccCCHHHcCCChHHHHcCcccCCCCH
Confidence            99999999986 58889999987543


No 86 
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.95  E-value=2.3e-28  Score=246.52  Aligned_cols=154  Identities=27%  Similarity=0.401  Sum_probs=126.8

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+||||||+|||++.++.+||+|||++...... .......+||+.|+|||++.+ ..++.++||
T Consensus       102 ~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv  179 (323)
T cd05575         102 AAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH-SKTTSTFCGTPEYLAPEVLRK-QPYDRTVDW  179 (323)
T ss_pred             HHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccC-CCccccccCChhhcChhhhcC-CCCCccccc
Confidence            369999999999999999999999999999999999999998643221 122344578999999999876 468999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|.+||.+.+..+.+..+.....                             .....++..+.+||.+|
T Consensus       180 wslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-----------------------------~~~~~~~~~~~~li~~~  230 (323)
T cd05575         180 WCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPL-----------------------------RLKPNISVSARHLLEGL  230 (323)
T ss_pred             cccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC-----------------------------CCCCCCCHHHHHHHHHH
Confidence            9999999999999999998877666666543110                             01135688999999999


Q ss_pred             cCCCCCCCcCH----HHHHhcccccCCCC
Q 012191          161 LSVEPYKRATA----SAALASEYFSTKPY  185 (468)
Q Consensus       161 L~~DP~kRpTa----~e~L~Hp~F~~~p~  185 (468)
                      |+.||.+||++    .+++.||||....|
T Consensus       231 l~~~p~~R~~~~~~~~~il~~~~~~~~~~  259 (323)
T cd05575         231 LQKDRTKRLGAKDDFLEIKNHVFFSSINW  259 (323)
T ss_pred             hhcCHHhCCCCCCCHHHHHcCCCcCCCCH
Confidence            99999999997    69999999987543


No 87 
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.95  E-value=2.7e-28  Score=249.58  Aligned_cols=158  Identities=30%  Similarity=0.472  Sum_probs=125.7

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC-----------------------------
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ-----------------------------   51 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~-----------------------------   51 (468)
                      +.||+.||+|||++||+||||||+|||++.++.++|+|||++..+......                             
T Consensus       107 ~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (364)
T cd05599         107 IAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAE  186 (364)
T ss_pred             HHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccccccccccccccccccccccccccccccc
Confidence            469999999999999999999999999999999999999998654321100                             


Q ss_pred             --------CccccccCCcccChhhhcCCCCCCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhc
Q 012191           52 --------PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKK  123 (468)
Q Consensus        52 --------~~~~~~gt~~Y~APE~l~g~~~~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~  123 (468)
                              .....+||+.|+|||++.+ ..++.++||||||||+|+|++|.+||.+.+..+.+..+........      
T Consensus       187 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~------  259 (364)
T cd05599         187 TWKRNRRALAYSTVGTPDYIAPEVFLQ-TGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQ------  259 (364)
T ss_pred             chhhcccccccccccCccccCHHHHcC-CCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccC------
Confidence                    1113468999999999876 5689999999999999999999999998887776666543111000      


Q ss_pred             cCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhcCCCCCCCcC---HHHHHhcccccCCCC
Q 012191          124 SKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRAT---ASAALASEYFSTKPY  185 (468)
Q Consensus       124 ~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL~~DP~kRpT---a~e~L~Hp~F~~~p~  185 (468)
                                    +     .....+++.+.+||.+||. +|.+|++   +.++|.||||....|
T Consensus       260 --------------~-----~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~~~  304 (364)
T cd05599         260 --------------F-----PDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGVDW  304 (364)
T ss_pred             --------------C-----CCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCCCH
Confidence                          0     0001468899999999997 9999998   999999999987654


No 88 
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95  E-value=8.2e-29  Score=253.26  Aligned_cols=152  Identities=32%  Similarity=0.598  Sum_probs=137.6

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEE-CCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLV-NNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILl-d~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      |.||+.|+.|||+..||||||||+|+++ ..-|.|||.|||++..+.++  ..++..+|.+.|-|||+|+|..+..+++|
T Consensus       124 F~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG--~kL~TsCGSLAYSAPEILLGDsYDAPAVD  201 (864)
T KOG4717|consen  124 FAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG--KKLTTSCGSLAYSAPEILLGDSYDAPAVD  201 (864)
T ss_pred             HHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCc--chhhcccchhhccCchhhhcCccCCcchh
Confidence            5799999999999999999999999876 56699999999999988876  46788899999999999999877778999


Q ss_pred             eeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           80 LWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        80 IWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||||||.|+||++||+..++.+.+..|+.+-...|                             ..++.++++||..
T Consensus       202 iWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvP-----------------------------shvS~eCrdLI~s  252 (864)
T KOG4717|consen  202 IWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVP-----------------------------SHVSKECRDLIQS  252 (864)
T ss_pred             hhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCc-----------------------------hhhhHHHHHHHHH
Confidence            99999999999999999999999999999987644333                             3578999999999


Q ss_pred             hcCCCCCCCcCHHHHHhcccccCC
Q 012191          160 LLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      ||..||.+|.|.+++..|+|++..
T Consensus       253 MLvRdPkkRAslEeI~s~~Wlq~~  276 (864)
T KOG4717|consen  253 MLVRDPKKRASLEEIVSTSWLQAG  276 (864)
T ss_pred             HHhcCchhhccHHHHhccccccCC
Confidence            999999999999999999999864


No 89 
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.95  E-value=4.2e-28  Score=245.70  Aligned_cols=185  Identities=36%  Similarity=0.625  Sum_probs=142.9

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC--CCccccccCCcccChhhhcCCCCCCCCc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR--QPLTSRVVTLWYRPPELLLGATDYGPSV   78 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~--~~~~~~~gt~~Y~APE~l~g~~~~s~~s   78 (468)
                      +.||+.||.|||+.||+|+||||+|||++.++.++|+|||++........  .......++..|+|||.+.+...++.++
T Consensus       112 ~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  191 (336)
T cd07849         112 LYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAI  191 (336)
T ss_pred             HHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHH
Confidence            36899999999999999999999999999999999999999876543221  1223456789999999987656688999


Q ss_pred             ceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCC--CCchhhhhcCCCcHHHHHH
Q 012191           79 DLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQP--YDSSLRETFKDLPTTAVNL  156 (468)
Q Consensus        79 DIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~s~~l~dL  156 (468)
                      ||||+||++|+|++|++||.+.+....+..+...++.++.+.+..........+....+  ....+....+.++.++.+|
T Consensus       192 DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  271 (336)
T cd07849         192 DIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDL  271 (336)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHH
Confidence            99999999999999999999988888888888888877666554322111111100001  1112233445678899999


Q ss_pred             HHHhcCCCCCCCcCHHHHHhcccccCCCC
Q 012191          157 IETLLSVEPYKRATASAALASEYFSTKPY  185 (468)
Q Consensus       157 L~~mL~~DP~kRpTa~e~L~Hp~F~~~p~  185 (468)
                      |.+||+.||.+|||+.++|.||||.....
T Consensus       272 i~~~l~~dP~~Rpt~~e~l~hp~~~~~~~  300 (336)
T cd07849         272 LDKMLTFNPHKRITVEEALAHPYLEQYHD  300 (336)
T ss_pred             HHHHcCCChhhCcCHHHHhcCccccccCC
Confidence            99999999999999999999999997543


No 90 
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.95  E-value=3.2e-28  Score=245.51  Aligned_cols=154  Identities=27%  Similarity=0.430  Sum_probs=127.9

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||+|||++||+||||||+|||++.++.+||+|||++....... ......+||+.|+|||++.+ ..++.++||
T Consensus       107 ~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di  184 (323)
T cd05616         107 AAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG-VTTKTFCGTPDYIAPEIIAY-QPYGKSVDW  184 (323)
T ss_pred             HHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCC-CccccCCCChhhcCHHHhcC-CCCCCccch
Confidence            3689999999999999999999999999999999999999986543221 22334578999999999976 568999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|..||.+.+....+..+.......                             ...++.++.+||.+|
T Consensus       185 wSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~-----------------------------p~~~s~~~~~li~~~  235 (323)
T cd05616         185 WAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAY-----------------------------PKSMSKEAVAICKGL  235 (323)
T ss_pred             hchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC-----------------------------CCcCCHHHHHHHHHH
Confidence            999999999999999999988777777665421111                             124688899999999


Q ss_pred             cCCCCCCCcC-----HHHHHhcccccCCCC
Q 012191          161 LSVEPYKRAT-----ASAALASEYFSTKPY  185 (468)
Q Consensus       161 L~~DP~kRpT-----a~e~L~Hp~F~~~p~  185 (468)
                      |+.||.+|++     ..+++.|+||....|
T Consensus       236 l~~~p~~R~~~~~~~~~~i~~h~~~~~~~~  265 (323)
T cd05616         236 MTKHPGKRLGCGPEGERDIKEHAFFRYIDW  265 (323)
T ss_pred             cccCHHhcCCCCCCCHHHHhcCCCcCCCCH
Confidence            9999999998     489999999987554


No 91 
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.95  E-value=2.7e-28  Score=246.09  Aligned_cols=154  Identities=31%  Similarity=0.481  Sum_probs=126.8

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||+|||++||+||||||+|||++.++.+||+|||++....... ......+||+.|+|||++.+ ..++.++||
T Consensus       107 ~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di  184 (324)
T cd05587         107 AAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG-KTTRTFCGTPDYIAPEIIAY-QPYGKSVDW  184 (324)
T ss_pred             HHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC-CceeeecCCccccChhhhcC-CCCCcccch
Confidence            3689999999999999999999999999999999999999986432211 22334578999999999976 458899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|.+||.+.+..+.+..+.......                             ...++..+.+||.+|
T Consensus       185 wslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~-----------------------------~~~~~~~~~~li~~~  235 (324)
T cd05587         185 WAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSY-----------------------------PKSLSKEAVSICKGL  235 (324)
T ss_pred             hhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC-----------------------------CCCCCHHHHHHHHHH
Confidence            999999999999999999888777776664321110                             124678899999999


Q ss_pred             cCCCCCCCcCH-----HHHHhcccccCCCC
Q 012191          161 LSVEPYKRATA-----SAALASEYFSTKPY  185 (468)
Q Consensus       161 L~~DP~kRpTa-----~e~L~Hp~F~~~p~  185 (468)
                      |..||.+|+++     .++++||||....|
T Consensus       236 l~~~P~~R~~~~~~~~~~~~~hp~~~~~~~  265 (324)
T cd05587         236 LTKHPAKRLGCGPTGERDIREHAFFRRIDW  265 (324)
T ss_pred             hhcCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence            99999999986     89999999987543


No 92 
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.95  E-value=5.8e-28  Score=239.45  Aligned_cols=180  Identities=50%  Similarity=0.933  Sum_probs=144.7

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||+|||+.||+|+||+|+||+++.++.+||+|||++...............++..|+|||.+.+...++.++||
T Consensus       122 ~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di  201 (302)
T cd07864         122 MKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDV  201 (302)
T ss_pred             HHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHH
Confidence            36899999999999999999999999999999999999999876654332233334567889999998765567889999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccC-CCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSK-LPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++|++||......+.+..+...++.+....|+... .+..............+...+..++..+.+||..
T Consensus       202 ~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  281 (302)
T cd07864         202 WSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDH  281 (302)
T ss_pred             HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHH
Confidence            999999999999999999988889999999988888777665422 1111111222222334445566789999999999


Q ss_pred             hcCCCCCCCcCHHHHHhcccc
Q 012191          160 LLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      ||..||.+|||+.++|.||||
T Consensus       282 ~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         282 MLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             HccCChhhCCCHHHHhcCCCC
Confidence            999999999999999999997


No 93 
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved 
Probab=99.95  E-value=3.7e-28  Score=245.10  Aligned_cols=154  Identities=27%  Similarity=0.411  Sum_probs=127.7

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ......+|++.|+|||++.+ ..++.++||
T Consensus       107 ~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~-~~~~~~~Di  184 (324)
T cd05589         107 AACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG-DRTSTFCGTPEFLAPEVLTE-TSYTRAVDW  184 (324)
T ss_pred             HHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCC-CcccccccCccccCHhHhcC-CCCCcccch
Confidence            3699999999999999999999999999999999999999986432211 22334578999999999976 468899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|..||.+.+..+.+..+.......                             ...++..+.+||.+|
T Consensus       185 wslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~-----------------------------p~~~~~~~~~li~~~  235 (324)
T cd05589         185 WGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRY-----------------------------PRFLSREAISIMRRL  235 (324)
T ss_pred             hhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC-----------------------------CCCCCHHHHHHHHHH
Confidence            999999999999999999988777776664321110                             124688899999999


Q ss_pred             cCCCCCCCc-----CHHHHHhcccccCCCC
Q 012191          161 LSVEPYKRA-----TASAALASEYFSTKPY  185 (468)
Q Consensus       161 L~~DP~kRp-----Ta~e~L~Hp~F~~~p~  185 (468)
                      |+.||.+||     ++.++++||||....+
T Consensus       236 L~~dP~~R~~~~~~~~~~l~~~~~f~~~~~  265 (324)
T cd05589         236 LRRNPERRLGSGEKDAEDVKKQPFFRDINW  265 (324)
T ss_pred             hhcCHhHcCCCCCCCHHHHhhCCCcCCCCH
Confidence            999999999     7999999999987544


No 94 
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.95  E-value=3e-28  Score=240.45  Aligned_cols=159  Identities=25%  Similarity=0.404  Sum_probs=125.0

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+||||||+|||++.++.++|+|||++....... .......+|+.|+|||.+.+ ..++.++||
T Consensus       103 ~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv  180 (280)
T cd05608         103 TAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ-SKTKGYAGTPGFMAPELLQG-EEYDFSVDY  180 (280)
T ss_pred             HHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCC-ccccccCCCcCccCHHHhcC-CCCCccccH
Confidence            3689999999999999999999999999999999999999987654332 22334578999999999986 468899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|..||...........+.......+.                         .....++..+.+||.+|
T Consensus       181 wslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~li~~~  235 (280)
T cd05608         181 FALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSV-------------------------TYPDKFSPASKSFCEAL  235 (280)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCC-------------------------CCcccCCHHHHHHHHHH
Confidence            99999999999999999865433222222211111100                         01135788999999999


Q ss_pred             cCCCCCCCc-----CHHHHHhcccccCCCCC
Q 012191          161 LSVEPYKRA-----TASAALASEYFSTKPYA  186 (468)
Q Consensus       161 L~~DP~kRp-----Ta~e~L~Hp~F~~~p~~  186 (468)
                      |+.||.+||     |++++++||||+...|.
T Consensus       236 l~~~P~~R~~~~~~~~~~~l~h~~~~~~~~~  266 (280)
T cd05608         236 LAKDPEKRLGFRDGNCDGLRTHPLFRDLNWR  266 (280)
T ss_pred             hcCCHHHhcCCCCCCHHHHhcChhhhcCCHh
Confidence            999999999     89999999999986554


No 95 
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.95  E-value=2e-28  Score=247.27  Aligned_cols=154  Identities=28%  Similarity=0.443  Sum_probs=126.5

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+||||||+|||++.++.+||+|||++....... .......||+.|+|||++.+ ..++.++||
T Consensus       101 ~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di  178 (323)
T cd05595         101 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-ATMKTFCGTPEYLAPEVLED-NDYGRAVDW  178 (323)
T ss_pred             HHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCC-CccccccCCcCcCCcccccC-CCCCchhch
Confidence            3699999999999999999999999999999999999999986432221 22334578999999999876 468899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|..||.+.+.......+......                             ....+++.+.+||.+|
T Consensus       179 wSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~-----------------------------~p~~~~~~~~~li~~~  229 (323)
T cd05595         179 WGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR-----------------------------FPRTLSPEAKSLLAGL  229 (323)
T ss_pred             hhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC-----------------------------CCCCCCHHHHHHHHHH
Confidence            99999999999999999887776666555321110                             0124788999999999


Q ss_pred             cCCCCCCCc-----CHHHHHhcccccCCCC
Q 012191          161 LSVEPYKRA-----TASAALASEYFSTKPY  185 (468)
Q Consensus       161 L~~DP~kRp-----Ta~e~L~Hp~F~~~p~  185 (468)
                      |..||.+|+     ++.++|+|+||....|
T Consensus       230 L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~  259 (323)
T cd05595         230 LKKDPKQRLGGGPSDAKEVMEHRFFLSINW  259 (323)
T ss_pred             ccCCHHHhCCCCCCCHHHHHcCCCcCCCCH
Confidence            999999998     8999999999987543


No 96 
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.95  E-value=6.2e-28  Score=238.44  Aligned_cols=178  Identities=44%  Similarity=0.807  Sum_probs=140.5

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECC-CCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNN-EGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~-~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +.||+.||.|||++||+|+||+|+||+++. ++.++|+|||++..+.... .......++++|+|||.+.+...++.++|
T Consensus       116 ~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~D  194 (295)
T cd07837         116 MYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPV-KSYTHEIVTLWYRAPEVLLGSTHYSTPVD  194 (295)
T ss_pred             HHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccceecCCCc-cccCCcccccCCCChHHhhCCCCCCchHH
Confidence            368999999999999999999999999998 8899999999987554321 12233456889999999876566889999


Q ss_pred             eeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccC-CCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           80 LWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSK-LPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        80 IWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      ||||||++|+|++|.+||.+.+....+..++...+.+....|.... ......+. . .....+....+.++..+.+||.
T Consensus       195 i~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~i~  272 (295)
T cd07837         195 IWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFP-Q-WKPQDLSRAVPDLSPEGLDLLQ  272 (295)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcC-c-ccchhHHHhccccCHHHHHHHH
Confidence            9999999999999999999999988888888888877766664321 11111010 0 0111233444678999999999


Q ss_pred             HhcCCCCCCCcCHHHHHhccccc
Q 012191          159 TLLSVEPYKRATASAALASEYFS  181 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~Hp~F~  181 (468)
                      +||..||.+|||+.++|.||||+
T Consensus       273 ~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         273 KMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             HHccCChhhcCCHHHHhcCCCcC
Confidence            99999999999999999999985


No 97 
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.95  E-value=6.4e-28  Score=245.33  Aligned_cols=181  Identities=38%  Similarity=0.652  Sum_probs=143.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||+|||+.||+||||||+|||++.++.++|+|||++.....    ......++..|+|||.+.+...++.++||
T Consensus       123 ~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv  198 (342)
T cd07879         123 VYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADA----EMTGYVVTRWYRAPEVILNWMHYNQTVDI  198 (342)
T ss_pred             HHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCC----CCCCceeeecccChhhhcCccccCchHHH
Confidence            36899999999999999999999999999999999999999865432    22345678899999998765568899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCC--CCCchhhhhcCCCcHHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQ--PYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |||||++|+|++|+.||.+.+....+..+....+.+...++..........+....  .....+...++.++..+.+||.
T Consensus       199 ~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  278 (342)
T cd07879         199 WSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLE  278 (342)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHH
Confidence            99999999999999999998888888888888887776665543222111111000  0112233445678889999999


Q ss_pred             HhcCCCCCCCcCHHHHHhcccccCCCC
Q 012191          159 TLLSVEPYKRATASAALASEYFSTKPY  185 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~Hp~F~~~p~  185 (468)
                      +||+.||.+|||+.++|.||||.....
T Consensus       279 ~~l~~dP~~R~~~~e~l~h~~f~~~~~  305 (342)
T cd07879         279 KMLELDVDKRLTATEALEHPYFDSFRD  305 (342)
T ss_pred             HHcCCChhhCcCHHHHhcCcchhhccc
Confidence            999999999999999999999987543


No 98 
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.95  E-value=3.8e-28  Score=249.12  Aligned_cols=159  Identities=29%  Similarity=0.435  Sum_probs=124.9

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC------------------------------
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR------------------------------   50 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~------------------------------   50 (468)
                      +.||+.||+|||++||+||||||+|||++.++.+||+|||++........                              
T Consensus       107 ~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (363)
T cd05628         107 IAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWK  186 (363)
T ss_pred             HHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhh
Confidence            36999999999999999999999999999999999999999865432110                              


Q ss_pred             ----CCccccccCCcccChhhhcCCCCCCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCC
Q 012191           51 ----QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKL  126 (468)
Q Consensus        51 ----~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~  126 (468)
                          ......+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+..+.+.++........         
T Consensus       187 ~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~---------  256 (363)
T cd05628         187 RNRRQLAFSTVGTPDYIAPEVFMQ-TGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLI---------  256 (363)
T ss_pred             hccccccccccCCccccCHHHHcC-CCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCccc---------
Confidence                01124578999999999976 4688999999999999999999999999888777777654211110         


Q ss_pred             CccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhcCCCCCC---CcCHHHHHhcccccCCCCC
Q 012191          127 PHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYK---RATASAALASEYFSTKPYA  186 (468)
Q Consensus       127 ~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL~~DP~k---RpTa~e~L~Hp~F~~~p~~  186 (468)
                           +      .     ....+++++++||.+|+. +|.+   ||+++++++||||....|.
T Consensus       257 -----~------p-----~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~~~~  302 (363)
T cd05628         257 -----F------P-----PEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGVDWE  302 (363)
T ss_pred             -----C------C-----CcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCCCHH
Confidence                 0      0     012367899999999876 4554   5899999999999986653


No 99 
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.95  E-value=7.2e-28  Score=245.07  Aligned_cols=183  Identities=38%  Similarity=0.696  Sum_probs=145.9

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++......    .....++..|+|||++.+...++.++||
T Consensus       124 ~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv  199 (343)
T cd07851         124 VYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDI  199 (343)
T ss_pred             HHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccccc----ccCCcccccccCHHHHhCCCCCCchHhH
Confidence            368999999999999999999999999999999999999998765432    3445678899999998765567899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCC--CchhhhhcCCCcHHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPY--DSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |||||++|+|++|.+||.+......+..+...++.+++.++..........+....+.  ...+...+..++..+.+||.
T Consensus       200 wslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~  279 (343)
T cd07851         200 WSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLE  279 (343)
T ss_pred             HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHH
Confidence            9999999999999999999988888999988888887776654332222111111111  11233444567899999999


Q ss_pred             HhcCCCCCCCcCHHHHHhcccccCCCCCC
Q 012191          159 TLLSVEPYKRATASAALASEYFSTKPYAC  187 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~Hp~F~~~p~~~  187 (468)
                      +||+.||.+|||+.++|.||||.....+.
T Consensus       280 ~~l~~~P~~Rpt~~ell~h~~~~~~~~~~  308 (343)
T cd07851         280 KMLVLDPDKRITAAEALAHPYLAEYHDPE  308 (343)
T ss_pred             HhCCCChhhCCCHHHHhcCCCccccCCCc
Confidence            99999999999999999999999764443


No 100
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.95  E-value=2.3e-28  Score=262.00  Aligned_cols=180  Identities=25%  Similarity=0.308  Sum_probs=129.9

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++|||||||||+|||++.++.+||+|||++..+...........+||+.|+|||++.+ ..|+.++||
T Consensus       273 ~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di  351 (501)
T PHA03210        273 MKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAG-DGYCEITDI  351 (501)
T ss_pred             HHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcC-CCCCcHHHH
Confidence            4699999999999999999999999999999999999999998765443333345678999999999977 468999999


Q ss_pred             eeeehhhhhhhhcCCC-CCC--CchHHHHHHHHHHcCCCCchhhhc----cCCCccccCCCCCCCCchhhhhc--CCCcH
Q 012191           81 WSVGCVFAELLIGKPI-LQG--RTEVEQLHKIFKLCGSPPDDYWKK----SKLPHATLFKPQQPYDSSLRETF--KDLPT  151 (468)
Q Consensus        81 WSLG~ILyeLltG~~p-f~g--~~~~e~l~~i~~~~g~p~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~--~~~s~  151 (468)
                      ||||||||||++|..+ |.+  .....++.+++..++....++...    ........+..   ....+...+  ..++.
T Consensus       352 wSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~~  428 (501)
T PHA03210        352 WSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDH---AGHSVPPLIRNLGLPA  428 (501)
T ss_pred             HHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhccc---CccchhhHHHhcCCCh
Confidence            9999999999998754 432  234556666665554433322110    00000000000   001111111  24678


Q ss_pred             HHHHHHHHhcCCCCCCCcCHHHHHhcccccCCC
Q 012191          152 TAVNLIETLLSVEPYKRATASAALASEYFSTKP  184 (468)
Q Consensus       152 ~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~p  184 (468)
                      ++.++|.+||++||.+|||+.|+|.||||....
T Consensus       429 ~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~~  461 (501)
T PHA03210        429 DFEYPLVKMLTFDWHLRPGAAELLALPLFSAEE  461 (501)
T ss_pred             HHHHHHHHHhccCcccCcCHHHHhhChhhhcCC
Confidence            899999999999999999999999999998753


No 101
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.95  E-value=6.9e-28  Score=239.17  Aligned_cols=180  Identities=43%  Similarity=0.761  Sum_probs=137.7

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC---CCccccccCCcccChhhhcCCCCCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR---QPLTSRVVTLWYRPPELLLGATDYGPS   77 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~---~~~~~~~gt~~Y~APE~l~g~~~~s~~   77 (468)
                      +.||+.||.|||++||+|+||||+||+++.++.+||+|||++........   .......++..|+|||.+.+...++.+
T Consensus       125 ~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  204 (310)
T cd07865         125 MKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPP  204 (310)
T ss_pred             HHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCch
Confidence            36999999999999999999999999999999999999999876543221   122344678899999998775567889


Q ss_pred             cceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCc-cccCCCCCCCCchhhhhc--CCCcHHHH
Q 012191           78 VDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH-ATLFKPQQPYDSSLRETF--KDLPTTAV  154 (468)
Q Consensus        78 sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~--~~~s~~l~  154 (468)
                      +|||||||++|+|++|.+||.+.+....+..+...++..+.+.|+...... ...+.........+...+  ...+..+.
T Consensus       205 ~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  284 (310)
T cd07865         205 IDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHAL  284 (310)
T ss_pred             hhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHH
Confidence            999999999999999999999998888888888888888777665432111 000110001111111111  12467789


Q ss_pred             HHHHHhcCCCCCCCcCHHHHHhcccc
Q 012191          155 NLIETLLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       155 dLL~~mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      +||.+||..||.+|||++++|+||||
T Consensus       285 dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         285 DLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             HHHHHHhcCChhhccCHHHHhcCCCC
Confidence            99999999999999999999999998


No 102
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.95  E-value=6.3e-28  Score=248.99  Aligned_cols=158  Identities=34%  Similarity=0.484  Sum_probs=124.0

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCC-------------------------------
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH-------------------------------   49 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~-------------------------------   49 (468)
                      +.||+.||+|||++||+||||||+|||++.++.+||+|||++..+....                               
T Consensus       107 ~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (382)
T cd05625         107 IAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCG  186 (382)
T ss_pred             HHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCcccccccccccccccccccccccccccccccccccccc
Confidence            3699999999999999999999999999999999999999974321000                               


Q ss_pred             ---------------CCCccccccCCcccChhhhcCCCCCCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcC
Q 012191           50 ---------------RQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCG  114 (468)
Q Consensus        50 ---------------~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g  114 (468)
                                     .......+||+.|+|||++.+ ..|+.++||||||||+|+|++|.+||.+.+..+....+.....
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~  265 (382)
T cd05625         187 DRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQT  265 (382)
T ss_pred             ccccchhhhhccccccccccccccCcccCCHHHhcC-CCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCC
Confidence                           000123478999999999976 4689999999999999999999999998887766665543211


Q ss_pred             CCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhcCCCCCCCcC---HHHHHhcccccCCCC
Q 012191          115 SPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRAT---ASAALASEYFSTKPY  185 (468)
Q Consensus       115 ~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL~~DP~kRpT---a~e~L~Hp~F~~~p~  185 (468)
                      ...                         ......+++++.+||.+|+ .||.+|++   +.+++.||||....+
T Consensus       266 ~~~-------------------------~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~~~  313 (382)
T cd05625         266 SLH-------------------------IPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTIDF  313 (382)
T ss_pred             CcC-------------------------CCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCcCh
Confidence            110                         0011357889999999987 59999997   999999999987544


No 103
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.95  E-value=2.5e-28  Score=250.12  Aligned_cols=177  Identities=34%  Similarity=0.607  Sum_probs=141.3

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCC-CcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNE-GVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~-g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +||+.||.+|-..||+|.||||+|||++.. ..+||||||.|.+...+   ..+.+.++..|+|||+++| ..|+...|+
T Consensus       543 qQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~en---eitPYLVSRFYRaPEIiLG-~~yd~~iD~  618 (752)
T KOG0670|consen  543 QQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFASEN---EITPYLVSRFYRAPEIILG-LPYDYPIDT  618 (752)
T ss_pred             HHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCccccccccc---cccHHHHHHhccCcceeec-CcccCCccc
Confidence            699999999999999999999999999875 56899999999877664   4677788899999999999 569999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCcc-----cc--------------------CCCC
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHA-----TL--------------------FKPQ  135 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~-----~~--------------------~~~~  135 (468)
                      ||+||+||||+||+.+|+|.++...+...+.+-|..|........+...     ..                    .+|.
T Consensus       619 WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPt  698 (752)
T KOG0670|consen  619 WSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPT  698 (752)
T ss_pred             eeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcc
Confidence            9999999999999999999999999999999999988765443222111     00                    1111


Q ss_pred             CCCCchhhhh--c----CCCcHHHHHHHHHhcCCCCCCCcCHHHHHhcccccC
Q 012191          136 QPYDSSLRET--F----KDLPTTAVNLIETLLSVEPYKRATASAALASEYFST  182 (468)
Q Consensus       136 ~~~~~~l~~~--~----~~~s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~  182 (468)
                      ..+...|...  +    ..+-..+.+||.+||.+||++|+|+.++|.||||+.
T Consensus       699 kdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  699 KDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE  751 (752)
T ss_pred             hhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence            1111111111  1    112245899999999999999999999999999975


No 104
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the 
Probab=99.95  E-value=8.1e-28  Score=237.41  Aligned_cols=179  Identities=41%  Similarity=0.744  Sum_probs=137.3

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+|+||||+|||++.++.++|+|||++....... .......++..|+|||++.+...++.++||
T Consensus       109 ~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv  187 (291)
T cd07844         109 LFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPS-KTYSNEVVTLWYRPPDVLLGSTEYSTSLDM  187 (291)
T ss_pred             HHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCC-ccccccccccccCCcHHhhcCcccCcHHHH
Confidence            3699999999999999999999999999999999999999986543221 112233567889999998775668899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCc-hHHHHHHHHHHcCCCCchhhhccCCCc-cccCCCCCCCCchhhhhcCCCc--HHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRT-EVEQLHKIFKLCGSPPDDYWKKSKLPH-ATLFKPQQPYDSSLRETFKDLP--TTAVNL  156 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~-~~e~l~~i~~~~g~p~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~s--~~l~dL  156 (468)
                      ||+||++|+|++|.+||.+.. ..+++..+....+.+....|....... .............+...+..++  ..+.+|
T Consensus       188 ~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  267 (291)
T cd07844         188 WGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEEL  267 (291)
T ss_pred             HHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHH
Confidence            999999999999999998766 567777788888888777775432111 1111000111122334444555  889999


Q ss_pred             HHHhcCCCCCCCcCHHHHHhcccc
Q 012191          157 IETLLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       157 L~~mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      |.+||+.||.+|||+.++|.||||
T Consensus       268 i~~~L~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         268 ALKFLQYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             HHHHhccCcccccCHHHHhcCCCC
Confidence            999999999999999999999998


No 105
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.95  E-value=1.2e-27  Score=234.69  Aligned_cols=178  Identities=35%  Similarity=0.690  Sum_probs=135.3

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.||+|+||||+||+++.++.++|+|||++........ ......++.+|+|||.+.+...++.++||
T Consensus       106 ~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di  184 (286)
T cd07847         106 IWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD-DYTDYVATRWYRAPELLVGDTQYGPPVDV  184 (286)
T ss_pred             HHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcc-cccCcccccccCCHHHHhCCCCcCchhhh
Confidence            46899999999999999999999999999999999999999976654321 22344678899999998775668899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchh---hhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDY---WKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLI  157 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL  157 (468)
                      |||||++|+|++|.+||.+....+.+..+....+......   +...... .....+.......+...+..++..+.+||
T Consensus       185 ~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li  263 (286)
T cd07847         185 WAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFF-KGLSIPEPETREPLESKFPNISSPALSFL  263 (286)
T ss_pred             HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhccccccc-ccccCCCcccccCHHHHhccCCHHHHHHH
Confidence            9999999999999999999888777776665554432211   1100000 00011111111233445667899999999


Q ss_pred             HHhcCCCCCCCcCHHHHHhcccc
Q 012191          158 ETLLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       158 ~~mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      .+||..||.+|||+.++|.||||
T Consensus       264 ~~~l~~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         264 KGCLQMDPTERLSCEELLEHPYF  286 (286)
T ss_pred             HHHhcCCccccCCHHHHhcCCCC
Confidence            99999999999999999999998


No 106
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase,  Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the 
Probab=99.95  E-value=5.1e-28  Score=244.93  Aligned_cols=186  Identities=33%  Similarity=0.589  Sum_probs=145.8

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC---CCccccccCCcccChhhhcCCCCCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR---QPLTSRVVTLWYRPPELLLGATDYGPS   77 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~---~~~~~~~gt~~Y~APE~l~g~~~~s~~   77 (468)
                      +.||+.||.|||++||+|+||||+|||++.++.+||+|||++........   .......++.+|+|||.+.+...++.+
T Consensus       113 ~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~  192 (334)
T cd07855         113 LYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTA  192 (334)
T ss_pred             HHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccc
Confidence            36899999999999999999999999999999999999999875543221   112345788999999998765568899


Q ss_pred             cceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCC--CCCCCchhhhhcCCCcHHHHH
Q 012191           78 VDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKP--QQPYDSSLRETFKDLPTTAVN  155 (468)
Q Consensus        78 sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~s~~l~d  155 (468)
                      +|||||||++|+|++|.+||.+.+...++..+....|.++...+..........+..  .......+...++.++.++.+
T Consensus       193 ~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (334)
T cd07855         193 IDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALD  272 (334)
T ss_pred             cchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHH
Confidence            999999999999999999999999888999999999988876654322111100000  001111223445678999999


Q ss_pred             HHHHhcCCCCCCCcCHHHHHhcccccCCCCC
Q 012191          156 LIETLLSVEPYKRATASAALASEYFSTKPYA  186 (468)
Q Consensus       156 LL~~mL~~DP~kRpTa~e~L~Hp~F~~~p~~  186 (468)
                      ||.+||+.||.+|||+.++|.||||...+.+
T Consensus       273 li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~  303 (334)
T cd07855         273 LLSQMLQFDPEERITVEQALQHPFLAQYHDP  303 (334)
T ss_pred             HHHHHccCChhhCcCHHHHHhChhhhhccCC
Confidence            9999999999999999999999999876554


No 107
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.95  E-value=1.1e-27  Score=247.24  Aligned_cols=160  Identities=30%  Similarity=0.419  Sum_probs=127.8

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCC---CCCCCc
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGAT---DYGPSV   78 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~---~~s~~s   78 (468)
                      .||+.||+|||++||+||||||+|||++.++.+||+|||++..............+||+.|+|||++.+..   .++.++
T Consensus       149 ~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~  228 (371)
T cd05622         149 AEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGREC  228 (371)
T ss_pred             HHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCcc
Confidence            68999999999999999999999999999999999999999766543322334567899999999987532   378899


Q ss_pred             ceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           79 DLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        79 DIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |||||||++|+|++|.+||.+.+....+..+........                         ......++..+++||.
T Consensus       229 DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~-------------------------~~~~~~~s~~~~~li~  283 (371)
T cd05622         229 DWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLT-------------------------FPDDNDISKEAKNLIC  283 (371)
T ss_pred             ceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCccc-------------------------CCCcCCCCHHHHHHHH
Confidence            999999999999999999999887777776654221110                         0011357899999999


Q ss_pred             HhcCCCCCC--CcCHHHHHhcccccCCCCC
Q 012191          159 TLLSVEPYK--RATASAALASEYFSTKPYA  186 (468)
Q Consensus       159 ~mL~~DP~k--RpTa~e~L~Hp~F~~~p~~  186 (468)
                      .||..++.+  |+++.++++|+||...++.
T Consensus       284 ~~L~~~~~r~~r~~~~ei~~h~~~~~~~~~  313 (371)
T cd05622         284 AFLTDREVRLGRNGVEEIKRHLFFKNDQWA  313 (371)
T ss_pred             HHcCChhhhcCCCCHHHHhcCcccCCCChh
Confidence            999844433  7899999999999886553


No 108
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the 
Probab=99.95  E-value=1.5e-27  Score=233.28  Aligned_cols=177  Identities=45%  Similarity=0.838  Sum_probs=143.5

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+|+||+|+||+++.++.++|+|||++....... ........+..|+|||.+.+...++.++||
T Consensus       104 ~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv  182 (282)
T cd07829         104 MYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPL-RTYTHEVVTLWYRAPEILLGSKHYSTAVDI  182 (282)
T ss_pred             HHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCc-cccCccccCcCcCChHHhcCCcCCCccccH
Confidence            3689999999999999999999999999999999999999987654332 123344567889999998775578899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCc--cccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPH--ATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |||||++|+|++|.+||.+.+..+.+..+...++.+.+..|.......  ...+ +. .........++.++..+.++|.
T Consensus       183 ~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~i~  260 (282)
T cd07829         183 WSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTF-PK-FPPKDLEKVLPRLDPEGIDLLS  260 (282)
T ss_pred             HHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccc-cc-cCccchHHhcccccHHHHHHHH
Confidence            999999999999999999999999999999999988888776532221  1111 11 1112234455677899999999


Q ss_pred             HhcCCCCCCCcCHHHHHhcccc
Q 012191          159 TLLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      +||..||.+|||+.+++.||||
T Consensus       261 ~~l~~~P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         261 KMLQYNPAKRISAKEALKHPYF  282 (282)
T ss_pred             HhhccCcccCCCHHHHhhCcCC
Confidence            9999999999999999999998


No 109
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt 
Probab=99.95  E-value=5.8e-28  Score=243.77  Aligned_cols=154  Identities=27%  Similarity=0.405  Sum_probs=127.2

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ......+||+.|+|||++.+ ..++.++||
T Consensus       102 ~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di  179 (325)
T cd05602         102 AAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN-GTTSTFCGTPEYLAPEVLHK-QPYDRTVDW  179 (325)
T ss_pred             HHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCC-CCcccccCCccccCHHHHcC-CCCCCcccc
Confidence            3699999999999999999999999999999999999999986433211 22345578999999999976 568899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|.+||.+.+..+.+..+.....                             ...+.++..+.+||.+|
T Consensus       180 wslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~-----------------------------~~~~~~~~~~~~li~~~  230 (325)
T cd05602         180 WCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL-----------------------------QLKPNITNSARHLLEGL  230 (325)
T ss_pred             ccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCc-----------------------------CCCCCCCHHHHHHHHHH
Confidence            9999999999999999998887777666643210                             01135788999999999


Q ss_pred             cCCCCCCCcCHH----HHHhcccccCCCC
Q 012191          161 LSVEPYKRATAS----AALASEYFSTKPY  185 (468)
Q Consensus       161 L~~DP~kRpTa~----e~L~Hp~F~~~p~  185 (468)
                      |+.||.+|+++.    ++++|+||....|
T Consensus       231 l~~~p~~R~~~~~~~~~i~~~~~~~~~~~  259 (325)
T cd05602         231 LQKDRTKRLGAKDDFMEIKNHIFFSPINW  259 (325)
T ss_pred             cccCHHHCCCCCCCHHHHhcCcccCCCCH
Confidence            999999999875    8999999976444


No 110
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.95  E-value=7.8e-28  Score=236.32  Aligned_cols=178  Identities=42%  Similarity=0.788  Sum_probs=139.8

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||+|||+++++|+||+|+||+++.++.++|+|||++....... .......++..|+|||++.+...++.++||
T Consensus       105 ~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di  183 (283)
T cd07835         105 LYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV-RTYTHEVVTLWYRAPEILLGSRQYSTPVDI  183 (283)
T ss_pred             HHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc-cccCccccccCCCCCceeecCcccCcHHHH
Confidence            3689999999999999999999999999999999999999987554321 122334568899999988765567889999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCC-ccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLP-HATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++|.+||.+.+....+..++...+.+....|...... ......+... ..........++..+.+||.+
T Consensus       184 ~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~  262 (283)
T cd07835         184 WSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWA-RQDLSKVVPNLDEDGLDLLSK  262 (283)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhccccc-ccchhhhcCCCCHHHHHHHHH
Confidence            99999999999999999999888888888888888877666442211 1000000000 112233456788999999999


Q ss_pred             hcCCCCCCCcCHHHHHhcccc
Q 012191          160 LLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      ||+.||.+|||+.++|.||||
T Consensus       263 ~l~~~P~~Rpt~~~il~~~~~  283 (283)
T cd07835         263 MLVYDPAKRISAKAALQHPYF  283 (283)
T ss_pred             HhcCChhhCcCHHHHhcCCCC
Confidence            999999999999999999998


No 111
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.95  E-value=1.1e-27  Score=247.47  Aligned_cols=159  Identities=33%  Similarity=0.470  Sum_probs=122.3

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCC-------------------------------
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH-------------------------------   49 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~-------------------------------   49 (468)
                      +.||+.||+|||+.||+||||||+||||+.++.+||+|||++..+....                               
T Consensus       107 ~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (381)
T cd05626         107 IAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCG  186 (381)
T ss_pred             HHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccc
Confidence            4699999999999999999999999999999999999999875321100                               


Q ss_pred             ---------------CCCccccccCCcccChhhhcCCCCCCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcC
Q 012191           50 ---------------RQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCG  114 (468)
Q Consensus        50 ---------------~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g  114 (468)
                                     .......+||+.|+|||++.+ ..++.++||||||||+|||++|.+||.+.+..+....+.....
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~  265 (381)
T cd05626         187 DRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLR-KGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWEN  265 (381)
T ss_pred             cccchhhccccccccccccccccCCccccCHHHHcC-CCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHcccc
Confidence                           000123578999999999976 4589999999999999999999999998877666555532111


Q ss_pred             CCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhcCC--CCCCCcCHHHHHhcccccCCCC
Q 012191          115 SPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSV--EPYKRATASAALASEYFSTKPY  185 (468)
Q Consensus       115 ~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL~~--DP~kRpTa~e~L~Hp~F~~~p~  185 (468)
                      ...                         ......+++++++||.+||..  ++..|+|+.++|.||||....|
T Consensus       266 ~~~-------------------------~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~~~  313 (381)
T cd05626         266 TLH-------------------------IPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEVDF  313 (381)
T ss_pred             ccC-------------------------CCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCCCh
Confidence            110                         001124789999999997654  4455999999999999987544


No 112
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.95  E-value=7.8e-28  Score=247.65  Aligned_cols=158  Identities=32%  Similarity=0.458  Sum_probs=123.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCC-------------------------------
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH-------------------------------   49 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~-------------------------------   49 (468)
                      +.||+.||+|||++||+||||||+|||++.++.+||+|||++..+....                               
T Consensus       107 ~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (376)
T cd05598         107 IAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLK  186 (376)
T ss_pred             HHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccccccccccccccccccccccccccccccc
Confidence            3699999999999999999999999999999999999999974321000                               


Q ss_pred             -----------CCCccccccCCcccChhhhcCCCCCCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCc
Q 012191           50 -----------RQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPD  118 (468)
Q Consensus        50 -----------~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~  118 (468)
                                 .......+||+.|+|||++.+ ..++.++||||||||+|+|++|.+||.+....+....+........ 
T Consensus       187 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~-  264 (376)
T cd05598         187 PLERRRKRQHQRCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLH-  264 (376)
T ss_pred             chhhhhhhhcccccccccCCCccccCHHHHcC-CCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCcccc-
Confidence                       000123478999999999976 5688999999999999999999999998877666555432111000 


Q ss_pred             hhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhcCCCCCCCc---CHHHHHhcccccCCCC
Q 012191          119 DYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRA---TASAALASEYFSTKPY  185 (468)
Q Consensus       119 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL~~DP~kRp---Ta~e~L~Hp~F~~~p~  185 (468)
                                              ......++..+.+||.+|+ .+|.+|+   |+.++|+||||....+
T Consensus       265 ------------------------~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~~~  309 (376)
T cd05598         265 ------------------------IPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGIDF  309 (376)
T ss_pred             ------------------------CCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCCCH
Confidence                                    0011357889999999987 5999999   9999999999987544


No 113
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.95  E-value=7.8e-28  Score=245.75  Aligned_cols=159  Identities=29%  Similarity=0.405  Sum_probs=121.6

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcC----CCCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLG----ATDYGP   76 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g----~~~~s~   76 (468)
                      +.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ......+||..|+|||++..    ...++.
T Consensus       174 ~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  252 (353)
T PLN00034        174 ARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM-DPCNSSVGTIAYMSPERINTDLNHGAYDGY  252 (353)
T ss_pred             HHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceeccccc-ccccccccCccccCccccccccccCcCCCc
Confidence            4699999999999999999999999999999999999999987654321 22345678999999998743    123456


Q ss_pred             CcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHH
Q 012191           77 SVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNL  156 (468)
Q Consensus        77 ~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dL  156 (468)
                      ++||||||||+|+|++|+.||......+....+........                         ......++.++++|
T Consensus       253 ~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~l~~l  307 (353)
T PLN00034        253 AGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQP-------------------------PEAPATASREFRHF  307 (353)
T ss_pred             chhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCC-------------------------CCCCCccCHHHHHH
Confidence            89999999999999999999974332222111111110000                         01113578899999


Q ss_pred             HHHhcCCCCCCCcCHHHHHhcccccCCCC
Q 012191          157 IETLLSVEPYKRATASAALASEYFSTKPY  185 (468)
Q Consensus       157 L~~mL~~DP~kRpTa~e~L~Hp~F~~~p~  185 (468)
                      |.+||..||.+|||+.|+|+||||.....
T Consensus       308 i~~~l~~~P~~Rpt~~ell~hp~~~~~~~  336 (353)
T PLN00034        308 ISCCLQREPAKRWSAMQLLQHPFILRAQP  336 (353)
T ss_pred             HHHHccCChhhCcCHHHHhcCcccccCCc
Confidence            99999999999999999999999988543


No 114
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.95  E-value=1.1e-27  Score=236.96  Aligned_cols=181  Identities=43%  Similarity=0.782  Sum_probs=142.4

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECC-CCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNN-EGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~-~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.||+|||++||+|+||+|+||+++. ++.+||+|||++...... ........+++.|+|||.+.+...++.++||
T Consensus       109 ~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv  187 (294)
T PLN00009        109 YQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP-VRTFTHEVVTLWYRAPEILLGSRHYSTPVDI  187 (294)
T ss_pred             HHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCC-ccccccCceeecccCHHHHhCCCCCCcHHHH
Confidence            68999999999999999999999999985 457999999998755432 1223344678899999998775568889999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccC-CCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSK-LPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      ||+||++|+|++|.+||.+.+..+.+.+++...+.+....|.... ++......+.. ....+....+.++..+.++|.+
T Consensus       188 ~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~  266 (294)
T PLN00009        188 WSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKW-PPKDLATVVPTLEPAGVDLLSK  266 (294)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccC-CCCCHHHhCcCCChHHHHHHHH
Confidence            999999999999999999988888888888888888888776421 11111111110 0112233345788999999999


Q ss_pred             hcCCCCCCCcCHHHHHhcccccCCC
Q 012191          160 LLSVEPYKRATASAALASEYFSTKP  184 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~Hp~F~~~p  184 (468)
                      ||..||.+||++.++|.||||...+
T Consensus       267 ~l~~~P~~Rps~~~~l~~~~~~~~~  291 (294)
T PLN00009        267 MLRLDPSKRITARAALEHEYFKDLG  291 (294)
T ss_pred             HccCChhhCcCHHHHhcCchHhHHh
Confidence            9999999999999999999998753


No 115
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.95  E-value=2.5e-28  Score=252.25  Aligned_cols=153  Identities=35%  Similarity=0.550  Sum_probs=134.1

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      +||+.||.|||+.+|+|||+||.|||++..|.+|+||||+|+....+ ....+...||+.|||||++.+ ..|+..+|+|
T Consensus       107 ~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~-t~vltsikGtPlYmAPElv~e-~pyd~~sDlW  184 (808)
T KOG0597|consen  107 YDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN-TSVLTSIKGTPLYMAPELVEE-QPYDHTSDLW  184 (808)
T ss_pred             HHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccC-ceeeeeccCcccccCHHHHcC-CCccchhhHH
Confidence            58999999999999999999999999999999999999999877653 456678899999999999986 6799999999


Q ss_pred             eeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhc
Q 012191           82 SVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLL  161 (468)
Q Consensus        82 SLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL  161 (468)
                      |||||+|||+.|+|||....-......|.+.--.+|                             ..++..+++||..+|
T Consensus       185 slGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p-----------------------------~~~S~~f~nfl~gLL  235 (808)
T KOG0597|consen  185 SLGCILYELYVGQPPFYARSITQLVKSILKDPVKPP-----------------------------STASSSFVNFLQGLL  235 (808)
T ss_pred             HHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCc-----------------------------ccccHHHHHHHHHHh
Confidence            999999999999999998877777777754222221                             257889999999999


Q ss_pred             CCCCCCCcCHHHHHhcccccCCCC
Q 012191          162 SVEPYKRATASAALASEYFSTKPY  185 (468)
Q Consensus       162 ~~DP~kRpTa~e~L~Hp~F~~~p~  185 (468)
                      ..||.+|+|..++|.|||++..-.
T Consensus       236 ~kdP~~RltW~~Ll~HpF~k~~~~  259 (808)
T KOG0597|consen  236 IKDPAQRLTWTDLLGHPFWKGKIN  259 (808)
T ss_pred             hcChhhcccHHHHhcChHHhhhhh
Confidence            999999999999999999987543


No 116
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.95  E-value=7.5e-28  Score=242.05  Aligned_cols=153  Identities=31%  Similarity=0.429  Sum_probs=127.0

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+||||||+|||++.++.+||+|||++....... .......||+.|+|||++.+ ..++.++||
T Consensus       104 ~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~-~~~~~~~Di  181 (318)
T cd05582         104 LAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-KKAYSFCGTVEYMAPEVVNR-RGHTQSADW  181 (318)
T ss_pred             HHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC-CceecccCChhhcCHHHHcC-CCCCCccce
Confidence            4699999999999999999999999999999999999999987544321 22334578999999999876 457899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|..||.+.+..+.+..+.......                             ...++..+.+||.+|
T Consensus       182 wslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~-----------------------------p~~~~~~~~~li~~~  232 (318)
T cd05582         182 WSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGM-----------------------------PQFLSPEAQSLLRAL  232 (318)
T ss_pred             eccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCC-----------------------------CCCCCHHHHHHHHHH
Confidence            999999999999999999888777666654321110                             124678899999999


Q ss_pred             cCCCCCCCcC-----HHHHHhcccccCCC
Q 012191          161 LSVEPYKRAT-----ASAALASEYFSTKP  184 (468)
Q Consensus       161 L~~DP~kRpT-----a~e~L~Hp~F~~~p  184 (468)
                      |+.||.+|||     +.+++.||||....
T Consensus       233 l~~~P~~R~~a~~~~~~~~~~~~~~~~~~  261 (318)
T cd05582         233 FKRNPANRLGAGPDGVEEIKRHPFFSTID  261 (318)
T ss_pred             hhcCHhHcCCCCCCCHHHHhCCCCcCCCC
Confidence            9999999999     78899999998754


No 117
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. 
Probab=99.95  E-value=9e-28  Score=235.70  Aligned_cols=177  Identities=41%  Similarity=0.788  Sum_probs=141.7

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++....... .......++..|++||.+.+...++.++||
T Consensus       106 ~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv  184 (284)
T cd07836         106 TYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV-NTFSNEVVTLWYRAPDVLLGSRTYSTSIDI  184 (284)
T ss_pred             HHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc-cccccccccccccChHHhcCCCCCCcHHHH
Confidence            4689999999999999999999999999999999999999987554321 122344668899999998776667889999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCC--CchhhhhcCCCcHHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPY--DSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |||||++|+|++|.+||.+.+..+.+..++.....+....|.......  .+....+.  ...+....+.++..+.++|.
T Consensus       185 ~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  262 (284)
T cd07836         185 WSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLP--EYKPTFPRYPPQDLQQLFPHADPLGIDLLH  262 (284)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCc--hhcccccCCChHHHHHHhhhcCcHHHHHHH
Confidence            999999999999999999999888999998888888777776433211  11111111  12223344567889999999


Q ss_pred             HhcCCCCCCCcCHHHHHhcccc
Q 012191          159 TLLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      +||+.||.+|||+.++|.||||
T Consensus       263 ~~l~~~p~~R~~~~~~l~~~~f  284 (284)
T cd07836         263 RLLQLNPELRISAHDALQHPWF  284 (284)
T ss_pred             HHhcCCcccCCCHHHHhcCCCC
Confidence            9999999999999999999998


No 118
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.95  E-value=8.1e-28  Score=242.14  Aligned_cols=184  Identities=40%  Similarity=0.664  Sum_probs=147.7

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC--CCccccccCCcccChhhhcCCCCCCCCc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR--QPLTSRVVTLWYRPPELLLGATDYGPSV   78 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~--~~~~~~~gt~~Y~APE~l~g~~~~s~~s   78 (468)
                      +.||+.||.|||+.||+|+||||+|||++.++.++|+|||++........  .......++.+|+|||.+.+...++.++
T Consensus       109 ~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~s  188 (330)
T cd07834         109 LYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAI  188 (330)
T ss_pred             HHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcch
Confidence            36899999999999999999999999999999999999999986654321  1234556789999999998755789999


Q ss_pred             ceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCC--CCCCCchhhhhcCCCcHHHHHH
Q 012191           79 DLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKP--QQPYDSSLRETFKDLPTTAVNL  156 (468)
Q Consensus        79 DIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~s~~l~dL  156 (468)
                      |||||||++|+|++|.+||.+.+..+.+..+....+.++...|..........+..  .......+...+..++..+.+|
T Consensus       189 Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  268 (330)
T cd07834         189 DIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDL  268 (330)
T ss_pred             hHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHH
Confidence            99999999999999999999999999999999988888876655322221111111  1111123444556789999999


Q ss_pred             HHHhcCCCCCCCcCHHHHHhcccccCCC
Q 012191          157 IETLLSVEPYKRATASAALASEYFSTKP  184 (468)
Q Consensus       157 L~~mL~~DP~kRpTa~e~L~Hp~F~~~p  184 (468)
                      |.+||+.||.+|||+.++|.||||....
T Consensus       269 i~~~l~~~P~~Rpt~~~ll~~~~~~~~~  296 (330)
T cd07834         269 LEKMLVFDPKKRITADEALAHPYLAQLH  296 (330)
T ss_pred             HHHHccCChhhCCCHHHHHhCccHHhhc
Confidence            9999999999999999999999998743


No 119
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.95  E-value=7.1e-28  Score=243.14  Aligned_cols=154  Identities=26%  Similarity=0.376  Sum_probs=126.0

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+||||||+|||++.++.+||+|||++...... .......+||+.|+|||++.+ ..++.++||
T Consensus       102 ~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv  179 (325)
T cd05604         102 AAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ-SDTTTTFCGTPEYLAPEVIRK-QPYDNTVDW  179 (325)
T ss_pred             HHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC-CCCcccccCChhhCCHHHHcC-CCCCCcCcc
Confidence            469999999999999999999999999999999999999998643221 122345578999999999976 458899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|.+||.+.+..+.+..+....  .                           ...+.++..+.+||.+|
T Consensus       180 wslG~il~el~~G~~pf~~~~~~~~~~~~~~~~--~---------------------------~~~~~~~~~~~~ll~~l  230 (325)
T cd05604         180 WCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKP--L---------------------------VLRPGASLTAWSILEEL  230 (325)
T ss_pred             ccccceehhhhcCCCCCCCCCHHHHHHHHHcCC--c---------------------------cCCCCCCHHHHHHHHHH
Confidence            999999999999999999887766666553310  0                           01134678899999999


Q ss_pred             cCCCCCCCcCH----HHHHhcccccCCCC
Q 012191          161 LSVEPYKRATA----SAALASEYFSTKPY  185 (468)
Q Consensus       161 L~~DP~kRpTa----~e~L~Hp~F~~~p~  185 (468)
                      |..||.+||++    .+++.||||....|
T Consensus       231 l~~~p~~R~~~~~~~~~i~~h~~f~~~~~  259 (325)
T cd05604         231 LEKDRQRRLGAKEDFLEIQEHPFFESLSW  259 (325)
T ss_pred             hccCHHhcCCCCCCHHHHhcCCCcCCCCH
Confidence            99999999976    59999999987544


No 120
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.95  E-value=9.9e-28  Score=234.68  Aligned_cols=179  Identities=47%  Similarity=0.829  Sum_probs=142.3

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.||+|+||+|+||+++.++.++|+|||.+....... .......++..|+|||.+.+...++.++||
T Consensus       104 ~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di  182 (283)
T cd05118         104 LYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV-RPYTHYVVTRWYRAPELLLGDKGYSTPVDI  182 (283)
T ss_pred             HHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-ccccCccCcccccCcHHHhcCCCCCchhHH
Confidence            4689999999999999999999999999999999999999987665432 223345678899999999875568899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCC-ccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLP-HATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++|++||.+.+..+.+..+...++.+....|...... ....+................++..+.+||.+
T Consensus       183 ~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  262 (283)
T cd05118         183 WSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQ  262 (283)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHH
Confidence            99999999999999999999988888888888888776666543220 00000000111112234456688999999999


Q ss_pred             hcCCCCCCCcCHHHHHhcccc
Q 012191          160 LLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      ||..||.+||++.++|.||||
T Consensus       263 ~l~~~P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         263 MLHYDPHKRITAEQALAHPYF  283 (283)
T ss_pred             HhccCcccCcCHHHHhhCCCC
Confidence            999999999999999999997


No 121
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.95  E-value=4.5e-28  Score=254.65  Aligned_cols=150  Identities=28%  Similarity=0.477  Sum_probs=124.9

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEE-CCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLV-NNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILl-d~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +.||+.||.|||++|||||||||+|||+ +..+.++|+|||.+......    +...+.|..|.|||++.. ..|+.++|
T Consensus       421 ~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~----~~tp~~t~~y~APEvl~~-~~yt~acD  495 (612)
T KOG0603|consen  421 AAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS----CDTPALTLQYVAPEVLAI-QEYTEACD  495 (612)
T ss_pred             HHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh----hcccchhhcccChhhhcc-CCCCcchh
Confidence            4689999999999999999999999999 58899999999999766543    344467899999999984 67999999


Q ss_pred             eeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           80 LWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        80 IWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++||+||+|+.||......   ..|....+.+...                           ..+|..+++||.+
T Consensus       496 ~WSLGvlLy~ML~G~tp~~~~P~~---~ei~~~i~~~~~s---------------------------~~vS~~AKdLl~~  545 (612)
T KOG0603|consen  496 WWSLGVLLYEMLTGRTLFAAHPAG---IEIHTRIQMPKFS---------------------------ECVSDEAKDLLQQ  545 (612)
T ss_pred             hHHHHHHHHHHHhCCCccccCCch---HHHHHhhcCCccc---------------------------cccCHHHHHHHHH
Confidence            999999999999999999776555   2233333333211                           3589999999999


Q ss_pred             hcCCCCCCCcCHHHHHhcccccCCCC
Q 012191          160 LLSVEPYKRATASAALASEYFSTKPY  185 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~Hp~F~~~p~  185 (468)
                      ||++||.+|+++.+++.||||...+.
T Consensus       546 LL~~dP~~Rl~~~~i~~h~w~~~~~t  571 (612)
T KOG0603|consen  546 LLQVDPALRLGADEIGAHPWFLSHPT  571 (612)
T ss_pred             hccCChhhCcChhhhccCcchhcCCC
Confidence            99999999999999999999944443


No 122
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of 
Probab=99.95  E-value=1.3e-27  Score=246.15  Aligned_cols=158  Identities=30%  Similarity=0.461  Sum_probs=122.9

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC-----------------------------
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ-----------------------------   51 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~-----------------------------   51 (468)
                      +.||+.||+|||++||+||||||+|||++.++.+||+|||++..+......                             
T Consensus       107 ~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (377)
T cd05629         107 MAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINL  186 (377)
T ss_pred             HHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccccccccccccccccccccccccccccccc
Confidence            369999999999999999999999999999999999999998532210000                             


Q ss_pred             -----------------CccccccCCcccChhhhcCCCCCCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcC
Q 012191           52 -----------------PLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCG  114 (468)
Q Consensus        52 -----------------~~~~~~gt~~Y~APE~l~g~~~~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g  114 (468)
                                       .....+||+.|+|||++.+ ..++.++||||||||+|+|++|.+||.+.+..+.+..+.....
T Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~  265 (377)
T cd05629         187 TMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQ-QGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRE  265 (377)
T ss_pred             cccchhhhhhhhhcccccccccCCCccccCHHHHcc-CCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCC
Confidence                             0012468999999999876 4689999999999999999999999998887776666643111


Q ss_pred             CCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhcCCCCCCC---cCHHHHHhcccccCCCC
Q 012191          115 SPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKR---ATASAALASEYFSTKPY  185 (468)
Q Consensus       115 ~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL~~DP~kR---pTa~e~L~Hp~F~~~p~  185 (468)
                      ...        +                 .....++.++.+||.+||. +|.+|   +|+.++|.||||....|
T Consensus       266 ~~~--------~-----------------p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~~~  313 (377)
T cd05629         266 TLY--------F-----------------PDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGVDW  313 (377)
T ss_pred             ccC--------C-----------------CCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCCCH
Confidence            100        0                 0012467899999999997 77765   59999999999986543


No 123
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.95  E-value=1.1e-27  Score=242.97  Aligned_cols=186  Identities=41%  Similarity=0.664  Sum_probs=144.9

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++|++|+||||+||+++.++.+||+|||++....... .......++..|+|||.+.+...++.++||
T Consensus       114 ~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di  192 (337)
T cd07858         114 LYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKG-DFMTEYVVTRWYRAPELLLNCSEYTTAIDV  192 (337)
T ss_pred             HHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCc-ccccccccccCccChHHHhcCCCCCCcccH
Confidence            3699999999999999999999999999999999999999987654322 223445678999999998764568899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCC--CchhhhhcCCCcHHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPY--DSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |||||++|+|++|.+||.+.+....+..+....+.+..+.|..........+....+.  ...+...++.++..+.+||.
T Consensus       193 wslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  272 (337)
T cd07858         193 WSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLE  272 (337)
T ss_pred             HHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHH
Confidence            9999999999999999999888888888888888877665532111111111000011  11223445678999999999


Q ss_pred             HhcCCCCCCCcCHHHHHhcccccCCCCCC
Q 012191          159 TLLSVEPYKRATASAALASEYFSTKPYAC  187 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~Hp~F~~~p~~~  187 (468)
                      +||+.||.+|||+.++|+||||.....+.
T Consensus       273 ~~l~~~P~~Rps~~ell~h~~~~~~~~~~  301 (337)
T cd07858         273 KMLVFDPSKRITVEEALAHPYLASLHDPS  301 (337)
T ss_pred             HHhcCChhhccCHHHHHcCcchhhhcCcc
Confidence            99999999999999999999998754443


No 124
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.95  E-value=9.4e-28  Score=245.81  Aligned_cols=159  Identities=28%  Similarity=0.448  Sum_probs=125.6

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC------------------------------
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR------------------------------   50 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~------------------------------   50 (468)
                      +.||+.||+|||++||+||||||+|||++.++.++|+|||++........                              
T Consensus       107 ~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  186 (360)
T cd05627         107 IAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWK  186 (360)
T ss_pred             HHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCccccccccccccccccccc
Confidence            46999999999999999999999999999999999999999864432110                              


Q ss_pred             ----CCccccccCCcccChhhhcCCCCCCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCC
Q 012191           51 ----QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKL  126 (468)
Q Consensus        51 ----~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~  126 (468)
                          ......+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.+....+..+........         
T Consensus       187 ~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~---------  256 (360)
T cd05627         187 KNRRQLAYSTVGTPDYIAPEVFMQ-TGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLV---------  256 (360)
T ss_pred             ccccccccccCCCccccCHHHHcC-CCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCcee---------
Confidence                01124578999999999976 5689999999999999999999999998887777666643111000         


Q ss_pred             CccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhcCCCCCCCc---CHHHHHhcccccCCCCC
Q 012191          127 PHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRA---TASAALASEYFSTKPYA  186 (468)
Q Consensus       127 ~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL~~DP~kRp---Ta~e~L~Hp~F~~~p~~  186 (468)
                                 +     .....++.++++||.+|+ .||.+|+   ++.+++.||||....|.
T Consensus       257 -----------~-----p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~~~~  302 (360)
T cd05627         257 -----------F-----PPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSHPFFEGVDWG  302 (360)
T ss_pred             -----------c-----CCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcCCCCCCCCHH
Confidence                       0     001236889999999987 4999998   48999999999987664


No 125
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.95  E-value=7e-28  Score=242.66  Aligned_cols=154  Identities=29%  Similarity=0.486  Sum_probs=126.1

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+|+||||+|||++.++.++|+|||++....... ......++|+.|+|||++.+ ..++.++||
T Consensus       102 ~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~-~~~~~~~Di  179 (318)
T cd05570         102 AAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG-VTTSTFCGTPDYIAPEILSY-QPYGPAVDW  179 (318)
T ss_pred             HHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCC-CcccceecCccccCHHHhcC-CCCCcchhh
Confidence            3699999999999999999999999999999999999999986432211 22234568999999999976 468899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|..||.+.+.......+......                             ....++..+.+||.+|
T Consensus       180 wslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~-----------------------------~~~~~~~~~~~li~~~  230 (318)
T cd05570         180 WALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVR-----------------------------YPRWLSKEAKSILKSF  230 (318)
T ss_pred             hhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCC-----------------------------CCCcCCHHHHHHHHHH
Confidence            99999999999999999888776665555321100                             0124678899999999


Q ss_pred             cCCCCCCCcCH-----HHHHhcccccCCCC
Q 012191          161 LSVEPYKRATA-----SAALASEYFSTKPY  185 (468)
Q Consensus       161 L~~DP~kRpTa-----~e~L~Hp~F~~~p~  185 (468)
                      |..||.+|||+     .+++.||||....|
T Consensus       231 l~~dP~~R~s~~~~~~~~ll~~~~~~~~~~  260 (318)
T cd05570         231 LTKNPEKRLGCLPTGEQDIKGHPFFREIDW  260 (318)
T ss_pred             ccCCHHHcCCCCCCCHHHHhcCCCcCCCCH
Confidence            99999999999     99999999987544


No 126
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.95  E-value=6e-28  Score=244.39  Aligned_cols=182  Identities=29%  Similarity=0.492  Sum_probs=144.5

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      -||+.||++||..+||+|||||+|||+|+.|.|+|+|+|+|..+..+  .+...++||..|||||++.+.. |+.+.|.|
T Consensus       294 AEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g--~~~~~rvGT~GYMAPEvl~ne~-Y~~s~Dwf  370 (591)
T KOG0986|consen  294 AEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEG--KPIRGRVGTVGYMAPEVLQNEV-YDFSPDWF  370 (591)
T ss_pred             HHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCC--CccccccCcccccCHHHHcCCc-ccCCccHH
Confidence            37999999999999999999999999999999999999999887665  5677889999999999998855 99999999


Q ss_pred             eeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhc
Q 012191           82 SVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLL  161 (468)
Q Consensus        82 SLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL  161 (468)
                      +|||+||||+.|+.||....+......+-.....-+.++                         -..+++++++|++.+|
T Consensus       371 ~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey-------------------------~~kFS~eakslc~~LL  425 (591)
T KOG0986|consen  371 SLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEY-------------------------SDKFSEEAKSLCEGLL  425 (591)
T ss_pred             HHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhc-------------------------ccccCHHHHHHHHHHH
Confidence            999999999999999977654433333322222222111                         1468999999999999


Q ss_pred             CCCCCCCc-----CHHHHHhcccccCCCCCC---CCCCCCCCCCChhHHHhhHHHHHH
Q 012191          162 SVEPYKRA-----TASAALASEYFSTKPYAC---DLSSLPIYPPSKEIDAKHREDARR  211 (468)
Q Consensus       162 ~~DP~kRp-----Ta~e~L~Hp~F~~~p~~~---~~~~~p~~~p~~e~~~k~~~~~~r  211 (468)
                      ..||.+|.     ++.++-+||||++..|.-   ..-.+|-.|+..++-++...+...
T Consensus       426 ~Kdp~~RLGcrg~ga~evk~HpfFk~lnw~rleagml~PPfiPdp~aVyakDv~DIeq  483 (591)
T KOG0986|consen  426 TKDPEKRLGCRGEGAQEVKEHPFFKDLNWRRLEAGMLEPPFIPDPGAVYAKDVLDIEQ  483 (591)
T ss_pred             ccCHHHhccCCCcCcchhhhCcccccCCHhHHhccCCCCCCCCCccccchhhhhhhhh
Confidence            99999996     578999999999987642   223345667777776666554433


No 127
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in 
Probab=99.95  E-value=9.1e-28  Score=241.95  Aligned_cols=154  Identities=31%  Similarity=0.531  Sum_probs=125.6

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+||||||+|||++.++.+||+|||++....... .......||+.|+|||++.+ ..++.++||
T Consensus       102 ~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv  179 (316)
T cd05619         102 AAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD-AKTCTFCGTPDYIAPEILLG-QKYNTSVDW  179 (316)
T ss_pred             HHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC-CceeeecCCccccCHHHHcC-CCCCchhhh
Confidence            3699999999999999999999999999999999999999986432211 12334578999999999876 468999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|..||.+.+..+.+..+...  .+.                    +       ...++.++.+||.+|
T Consensus       180 wslG~il~el~~G~~pf~~~~~~~~~~~i~~~--~~~--------------------~-------~~~~~~~~~~li~~~  230 (316)
T cd05619         180 WSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD--NPC--------------------Y-------PRWLTREAKDILVKL  230 (316)
T ss_pred             hhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCC--------------------C-------CccCCHHHHHHHHHH
Confidence            99999999999999999988776665554321  110                    0       013678899999999


Q ss_pred             cCCCCCCCcCHH-HHHhcccccCCCC
Q 012191          161 LSVEPYKRATAS-AALASEYFSTKPY  185 (468)
Q Consensus       161 L~~DP~kRpTa~-e~L~Hp~F~~~p~  185 (468)
                      |..||.+|+++. ++++||||....|
T Consensus       231 l~~~P~~R~~~~~~l~~h~~~~~~~~  256 (316)
T cd05619         231 FVREPERRLGVKGDIRQHPFFREIDW  256 (316)
T ss_pred             hccCHhhcCCChHHHHcCcccCCCCH
Confidence            999999999996 8999999988654


No 128
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.95  E-value=5.6e-28  Score=247.66  Aligned_cols=179  Identities=24%  Similarity=0.398  Sum_probs=124.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+||||||+|||++.++.+||+|||++......  .......||+.|+|||++.+ ..++.++||
T Consensus       163 ~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di  239 (357)
T PHA03209        163 EKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA--PAFLGLAGTVETNAPEVLAR-DKYNSKADI  239 (357)
T ss_pred             HHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccC--cccccccccccccCCeecCC-CCCCchhhH
Confidence            369999999999999999999999999999999999999998753322  12234578999999999976 458999999


Q ss_pred             eeeehhhhhhhhcC-CCCCCCc---------hHHHHHHHHHHcCCCCchhhhccCCCccc-c--C--CCCCCCCchhhhh
Q 012191           81 WSVGCVFAELLIGK-PILQGRT---------EVEQLHKIFKLCGSPPDDYWKKSKLPHAT-L--F--KPQQPYDSSLRET  145 (468)
Q Consensus        81 WSLG~ILyeLltG~-~pf~g~~---------~~e~l~~i~~~~g~p~~~~~~~~~~~~~~-~--~--~~~~~~~~~l~~~  145 (468)
                      |||||++|+|+++. ++|....         ....+..++..++..+..+.......... .  +  ....++.......
T Consensus       240 wSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (357)
T PHA03209        240 WSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQ  319 (357)
T ss_pred             HHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHh
Confidence            99999999999854 4444321         12334445555554443332100000000 0  0  0001111100111


Q ss_pred             cCCCcHHHHHHHHHhcCCCCCCCcCHHHHHhcccccC
Q 012191          146 FKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST  182 (468)
Q Consensus       146 ~~~~s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~  182 (468)
                      ...++.++.+||.+||++||.+||||.|+|+||||++
T Consensus       320 ~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~  356 (357)
T PHA03209        320 RVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ  356 (357)
T ss_pred             ccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence            2356788899999999999999999999999999985


No 129
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.95  E-value=1.8e-27  Score=241.10  Aligned_cols=162  Identities=26%  Similarity=0.406  Sum_probs=126.7

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcC----CCCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLG----ATDYGP   76 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g----~~~~s~   76 (468)
                      +.||+.||+|||++||+||||||+|||++.++.+||+|||++..............+||+.|+|||++.+    ...++.
T Consensus       108 ~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  187 (331)
T cd05597         108 LAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGP  187 (331)
T ss_pred             HHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCC
Confidence            4699999999999999999999999999999999999999987654433222233568999999999863    245788


Q ss_pred             CcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHH
Q 012191           77 SVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNL  156 (468)
Q Consensus        77 ~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dL  156 (468)
                      ++|||||||++|+|++|..||.+....+.+..+........                        +......++..+++|
T Consensus       188 ~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~------------------------~~~~~~~~~~~~~~l  243 (331)
T cd05597         188 ECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQ------------------------FPPDVTDVSEEAKDL  243 (331)
T ss_pred             cceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCccc------------------------CCCccCCCCHHHHHH
Confidence            99999999999999999999998877766666543211100                        011123478999999


Q ss_pred             HHHhcCCCCCC--CcCHHHHHhcccccCCCCC
Q 012191          157 IETLLSVEPYK--RATASAALASEYFSTKPYA  186 (468)
Q Consensus       157 L~~mL~~DP~k--RpTa~e~L~Hp~F~~~p~~  186 (468)
                      |.+||..++.+  |+++.++|.||||....|.
T Consensus       244 i~~ll~~~~~r~~r~~~~~~l~hp~~~~~~~~  275 (331)
T cd05597         244 IRRLICSPETRLGRNGLQDFKDHPFFEGIDWD  275 (331)
T ss_pred             HHHHccCcccccCCCCHHHHhcCCCCCCCCHH
Confidence            99999765544  7899999999999876553


No 130
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.95  E-value=1.9e-27  Score=240.95  Aligned_cols=161  Identities=25%  Similarity=0.391  Sum_probs=126.8

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcC----CCCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLG----ATDYGP   76 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g----~~~~s~   76 (468)
                      +.||+.||.|||++||+||||||+|||++.++.+||+|||++..............+||+.|+|||++.+    ...++.
T Consensus       108 ~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  187 (332)
T cd05623         108 LAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGP  187 (332)
T ss_pred             HHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCC
Confidence            3699999999999999999999999999999999999999986554332222334578999999999863    345788


Q ss_pred             CcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHH
Q 012191           77 SVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNL  156 (468)
Q Consensus        77 ~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dL  156 (468)
                      ++|||||||++|+|++|..||.+.+..+.+..+.......+                        +......++.++++|
T Consensus       188 ~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~------------------------~p~~~~~~s~~~~~l  243 (332)
T cd05623         188 ECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ------------------------FPAQVTDVSEDAKDL  243 (332)
T ss_pred             cCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCcccc------------------------CCCccccCCHHHHHH
Confidence            99999999999999999999998887777666643211100                        011123578999999


Q ss_pred             HHHhcCCCCCC--CcCHHHHHhcccccCCCC
Q 012191          157 IETLLSVEPYK--RATASAALASEYFSTKPY  185 (468)
Q Consensus       157 L~~mL~~DP~k--RpTa~e~L~Hp~F~~~p~  185 (468)
                      |.+||..++.+  |+++.++++||||....|
T Consensus       244 i~~ll~~~~~r~~r~~~~~~~~h~~f~~~~~  274 (332)
T cd05623         244 IRRLICSREHRLGQNGIEDFKQHPFFTGIDW  274 (332)
T ss_pred             HHHHccChhhhcCCCCHHHHhCCCCcCCCCH
Confidence            99999765554  689999999999987554


No 131
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.95  E-value=1.8e-27  Score=241.20  Aligned_cols=153  Identities=25%  Similarity=0.442  Sum_probs=119.0

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      .||+.||.|||++||+||||||+|||++.++.+||+|||++....... .......||+.|+|||++.+ ..++.++|||
T Consensus       103 ~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~Diw  180 (329)
T cd05618         103 AEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG-DTTSTFCGTPNYIAPEILRG-EDYGFSVDWW  180 (329)
T ss_pred             HHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC-CccccccCCccccCHHHHcC-CCCCCcccee
Confidence            689999999999999999999999999999999999999986432211 22334578999999999976 4688999999


Q ss_pred             eeehhhhhhhhcCCCCCCCc--------hHH-HHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHH
Q 012191           82 SVGCVFAELLIGKPILQGRT--------EVE-QLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTT  152 (468)
Q Consensus        82 SLG~ILyeLltG~~pf~g~~--------~~e-~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~  152 (468)
                      ||||++|+|++|..||....        ... ....+....                             ......++..
T Consensus       181 slG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~-----------------------------~~~p~~~~~~  231 (329)
T cd05618         181 ALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ-----------------------------IRIPRSLSVK  231 (329)
T ss_pred             cccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC-----------------------------CCCCCCCCHH
Confidence            99999999999999995211        011 111111100                             0011346788


Q ss_pred             HHHHHHHhcCCCCCCCcC------HHHHHhcccccCCCC
Q 012191          153 AVNLIETLLSVEPYKRAT------ASAALASEYFSTKPY  185 (468)
Q Consensus       153 l~dLL~~mL~~DP~kRpT------a~e~L~Hp~F~~~p~  185 (468)
                      +.+||.+||+.||.+|+|      +.++++||||....|
T Consensus       232 ~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~~~  270 (329)
T cd05618         232 AASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDW  270 (329)
T ss_pred             HHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCCCH
Confidence            999999999999999998      589999999987544


No 132
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning 
Probab=99.95  E-value=2.9e-27  Score=232.33  Aligned_cols=180  Identities=38%  Similarity=0.690  Sum_probs=139.2

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++...............++.+|+|||++.+...++.++||
T Consensus       106 ~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv  185 (288)
T cd07833         106 IWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDV  185 (288)
T ss_pred             HHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhH
Confidence            36899999999999999999999999999999999999999877665433244556778999999999875478899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCC-cc-ccCCCCCCCCchhhhhcCC-CcHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLP-HA-TLFKPQQPYDSSLRETFKD-LPTTAVNLI  157 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~-~~-~~~~~~~~~~~~l~~~~~~-~s~~l~dLL  157 (468)
                      |||||++|+|++|.+||.+....+.+..+...++..+...+...... .. ....+.......+...+.. ++..+.+||
T Consensus       186 ~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  265 (288)
T cd07833         186 WAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFL  265 (288)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHH
Confidence            99999999999999999998888888887777776655433321110 00 0000011111122333333 489999999


Q ss_pred             HHhcCCCCCCCcCHHHHHhcccc
Q 012191          158 ETLLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       158 ~~mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      .+||..||.+|||+.+++.||||
T Consensus       266 ~~~l~~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         266 KACLRMDPKERLTCDELLQHPYF  288 (288)
T ss_pred             HHHhccCchhcccHHHHhcCCCC
Confidence            99999999999999999999998


No 133
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.94  E-value=2e-27  Score=240.31  Aligned_cols=182  Identities=38%  Similarity=0.672  Sum_probs=142.9

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC---CCccccccCCcccChhhhcCCCCCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR---QPLTSRVVTLWYRPPELLLGATDYGPS   77 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~---~~~~~~~gt~~Y~APE~l~g~~~~s~~   77 (468)
                      +.||+.||.|||+.||+|+||||+|||++.++.++|+|||++........   .......++..|+|||.+.+...++.+
T Consensus       111 ~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~  190 (332)
T cd07857         111 IYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKA  190 (332)
T ss_pred             HHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcH
Confidence            36999999999999999999999999999999999999999976543221   112345789999999998765668899


Q ss_pred             cceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCC---CCCCCCchhhhhcCCCcHHHH
Q 012191           78 VDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFK---PQQPYDSSLRETFKDLPTTAV  154 (468)
Q Consensus        78 sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~s~~l~  154 (468)
                      +||||+||++|+|++|.+||.+......+..++..++.++.+.+.....+....+.   ...+ ...+...++.++..+.
T Consensus       191 ~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  269 (332)
T cd07857         191 IDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIP-KKPFESIFPNANPLAL  269 (332)
T ss_pred             HHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccC-CcchHhhCCCCCHHHH
Confidence            99999999999999999999999888899999998888876654432221110000   0000 1122334456788999


Q ss_pred             HHHHHhcCCCCCCCcCHHHHHhcccccCC
Q 012191          155 NLIETLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       155 dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      +||.+||+.||.+|||+.++|.||||..+
T Consensus       270 ~li~~~l~~~P~~R~t~~~ll~~~~~~~~  298 (332)
T cd07857         270 DLLEKLLAFDPTKRISVEEALEHPYLAIW  298 (332)
T ss_pred             HHHHHHccCCcccCCCHHHHhcChhhhhh
Confidence            99999999999999999999999999854


No 134
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.94  E-value=2.3e-27  Score=233.01  Aligned_cols=179  Identities=37%  Similarity=0.671  Sum_probs=137.9

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++....... .......++.+|+|||.+.+...++.++||
T Consensus       106 ~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv  184 (286)
T cd07846         106 LFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG-EVYTDYVATRWYRAPELLVGDTKYGRAVDI  184 (286)
T ss_pred             HHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc-cccCcccceeeccCcHHhccccccCchHhH
Confidence            3689999999999999999999999999999999999999987654332 233445678999999998765567889999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCC--ccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLP--HATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |||||++|+|++|.+||.+....+.+..+....+.............  ......+.......+...++.++..+.+||.
T Consensus       185 ~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  264 (286)
T cd07846         185 WAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAK  264 (286)
T ss_pred             HHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHH
Confidence            99999999999999999988888888887766655432211100000  0001111222223344556788999999999


Q ss_pred             HhcCCCCCCCcCHHHHHhcccc
Q 012191          159 TLLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      +||..||.+|||+.++|.||||
T Consensus       265 ~~l~~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         265 QCLRIDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             HHhcCCcccchhHHHHhcCCCC
Confidence            9999999999999999999998


No 135
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, 
Probab=99.94  E-value=1.7e-27  Score=235.62  Aligned_cols=158  Identities=27%  Similarity=0.456  Sum_probs=126.8

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.||+|+||||+||++++++.++|+|||++......  ......++++.|+|||++.+ ..++.++||
T Consensus       108 ~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di  184 (285)
T cd05605         108 AAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG--ETIRGRVGTVGYMAPEVVKN-ERYTFSPDW  184 (285)
T ss_pred             HHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC--CccccccCCCCccCcHHhcC-CCCCccccc
Confidence            369999999999999999999999999999999999999998765432  12234578999999999976 458899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||+||++|+|++|..||.+.........+.........                         .....++..+.+||.+|
T Consensus       185 ws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~li~~~  239 (285)
T cd05605         185 WGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQE-------------------------EYSEKFSEAARSICRQL  239 (285)
T ss_pred             hhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhccc-------------------------ccCcccCHHHHHHHHHH
Confidence            99999999999999999887655444433322111110                         01134788899999999


Q ss_pred             cCCCCCCCc-----CHHHHHhcccccCCCCC
Q 012191          161 LSVEPYKRA-----TASAALASEYFSTKPYA  186 (468)
Q Consensus       161 L~~DP~kRp-----Ta~e~L~Hp~F~~~p~~  186 (468)
                      |..||.+||     ++.+++.||||....|.
T Consensus       240 l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~~  270 (285)
T cd05605         240 LTKDPGFRLGCRGEGAEEVKAHPFFRTANFK  270 (285)
T ss_pred             ccCCHHHhcCCCCCCHHHHhcCcCccCCCHH
Confidence            999999999     99999999999876553


No 136
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.94  E-value=1.8e-27  Score=239.58  Aligned_cols=154  Identities=25%  Similarity=0.390  Sum_probs=124.3

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.||+||||||+||||+.++.+||+|||++....... ......+||+.|+|||++.+ ..++.++||
T Consensus       102 ~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di  179 (321)
T cd05603         102 AAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE-ETTSTFCGTPEYLAPEVLRK-EPYDRTVDW  179 (321)
T ss_pred             HHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC-CccccccCCcccCCHHHhcC-CCCCCcCcc
Confidence            3699999999999999999999999999999999999999986432211 22334578999999999876 468899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|.+||.+.+.......+...   +.                          ......+..+.+||.+|
T Consensus       180 wslG~il~el~~g~~pf~~~~~~~~~~~i~~~---~~--------------------------~~~~~~~~~~~~li~~~  230 (321)
T cd05603         180 WCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK---PL--------------------------QLPGGKTVAACDLLVGL  230 (321)
T ss_pred             cccchhhhhhhcCCCCCCCCCHHHHHHHHhcC---CC--------------------------CCCCCCCHHHHHHHHHH
Confidence            99999999999999999988766655555321   10                          01134677899999999


Q ss_pred             cCCCCCCCcCH----HHHHhcccccCCCC
Q 012191          161 LSVEPYKRATA----SAALASEYFSTKPY  185 (468)
Q Consensus       161 L~~DP~kRpTa----~e~L~Hp~F~~~p~  185 (468)
                      |+.||.+|+++    .++++|+||....|
T Consensus       231 l~~~p~~R~~~~~~~~~~~~~~~~~~~~~  259 (321)
T cd05603         231 LHKDQRRRLGAKADFLEIKNHVFFSPINW  259 (321)
T ss_pred             ccCCHhhcCCCCCCHHHHhCCCCcCCCCH
Confidence            99999999875    59999999986433


No 137
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94  E-value=3e-28  Score=246.16  Aligned_cols=152  Identities=30%  Similarity=0.491  Sum_probs=127.2

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +++++.||.|||..+.+|||||+.|||+..+|.+||+|||.+.......... ...+||+.|||||++.+ ..|+.++||
T Consensus       117 lre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr-~tfvGTPfwMAPEVI~~-~~Y~~KADI  194 (467)
T KOG0201|consen  117 LREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRR-KTFVGTPFWMAPEVIKQ-SGYDTKADI  194 (467)
T ss_pred             hHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhcc-ccccccccccchhhhcc-ccccchhhh
Confidence            5789999999999999999999999999999999999999997766543333 67799999999999985 679999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||||++.+||++|.||+.....+..+..|-+   ..|                      ..+.   ..+++.+++||..|
T Consensus       195 WSLGITaiEla~GePP~s~~hPmrvlflIpk---~~P----------------------P~L~---~~~S~~~kEFV~~C  246 (467)
T KOG0201|consen  195 WSLGITAIELAKGEPPHSKLHPMRVLFLIPK---SAP----------------------PRLD---GDFSPPFKEFVEAC  246 (467)
T ss_pred             hhhhHHHHHHhcCCCCCcccCcceEEEeccC---CCC----------------------Cccc---cccCHHHHHHHHHH
Confidence            9999999999999999987665333322211   000                      0111   36889999999999


Q ss_pred             cCCCCCCCcCHHHHHhcccccC
Q 012191          161 LSVEPYKRATASAALASEYFST  182 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F~~  182 (468)
                      |..||+.||||.++|.|+|++.
T Consensus       247 L~k~P~~RpsA~~LLKh~FIk~  268 (467)
T KOG0201|consen  247 LDKNPEFRPSAKELLKHKFIKR  268 (467)
T ss_pred             hhcCcccCcCHHHHhhhHHHHh
Confidence            9999999999999999999987


No 138
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.94  E-value=3.2e-27  Score=233.45  Aligned_cols=178  Identities=43%  Similarity=0.731  Sum_probs=132.2

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      .||+.||.|||+.||+|+||||+|||++.++.++|+|||++....... .......+++.|+|||.+.+...++.++|||
T Consensus       110 ~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~  188 (291)
T cd07870         110 FQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPS-QTYSSEVVTLWYRPPDVLLGATDYSSALDIW  188 (291)
T ss_pred             HHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCC-CCCCCccccccccCCceeecCCCCCcHHHHH
Confidence            689999999999999999999999999999999999999986543221 1223345689999999987655678899999


Q ss_pred             eeehhhhhhhhcCCCCCCCch-HHHHHHHHHHcCCCCchhhhccC-CCccccCCCCCCCCchhhhhcC--CCcHHHHHHH
Q 012191           82 SVGCVFAELLIGKPILQGRTE-VEQLHKIFKLCGSPPDDYWKKSK-LPHATLFKPQQPYDSSLRETFK--DLPTTAVNLI  157 (468)
Q Consensus        82 SLG~ILyeLltG~~pf~g~~~-~e~l~~i~~~~g~p~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~--~~s~~l~dLL  157 (468)
                      ||||++|+|++|.+||.+... .+.+..+....+.+....|.... .+..............+...+.  ..+..+.+||
T Consensus       189 slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll  268 (291)
T cd07870         189 GAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLA  268 (291)
T ss_pred             HHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHH
Confidence            999999999999999976543 46667777777777666554321 1110000000001111222222  2367899999


Q ss_pred             HHhcCCCCCCCcCHHHHHhcccc
Q 012191          158 ETLLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       158 ~~mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      .+||..||.+|||+.++|.||||
T Consensus       269 ~~~l~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         269 SQMLMMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             HHHhCcCcccCcCHHHHhcCCCC
Confidence            99999999999999999999998


No 139
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.94  E-value=1.2e-27  Score=253.86  Aligned_cols=179  Identities=27%  Similarity=0.399  Sum_probs=124.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC-CccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +.||+.||.|||++||+||||||+||||+.++.++|+|||++......... ......||+.|+|||++.+ ..++.++|
T Consensus       266 ~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~-~~~~~~sD  344 (461)
T PHA03211        266 ARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAG-DPYTPSVD  344 (461)
T ss_pred             HHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcC-CCCCchHH
Confidence            479999999999999999999999999999999999999999765432221 1224568999999999977 45899999


Q ss_pred             eeeeehhhhhhhhcCCCC-CCCc------hHHHHHHHHHHcCCCCchhhhcc--------CCCccccCCCCCCCCchhhh
Q 012191           80 LWSVGCVFAELLIGKPIL-QGRT------EVEQLHKIFKLCGSPPDDYWKKS--------KLPHATLFKPQQPYDSSLRE  144 (468)
Q Consensus        80 IWSLG~ILyeLltG~~pf-~g~~------~~e~l~~i~~~~g~p~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~  144 (468)
                      |||||||||||++|..++ ....      ...++.+++...+....++-...        .........+  .+......
T Consensus       345 vwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~  422 (461)
T PHA03211        345 IWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRP--AYTRPAWT  422 (461)
T ss_pred             HHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCC--ccCCcchh
Confidence            999999999999987544 3221      12344444444333222111000        0000000000  00101112


Q ss_pred             hcCCCcHHHHHHHHHhcCCCCCCCcCHHHHHhcccccC
Q 012191          145 TFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST  182 (468)
Q Consensus       145 ~~~~~s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~  182 (468)
                      .+..++..+.+||.+||++||.+|||+.|||+||||+.
T Consensus       423 ~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        423 RYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             hhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence            22356778999999999999999999999999999975


No 140
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.94  E-value=3e-27  Score=239.34  Aligned_cols=183  Identities=40%  Similarity=0.672  Sum_probs=142.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC----CCccccccCCcccChhhhcCCCCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR----QPLTSRVVTLWYRPPELLLGATDYGP   76 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~----~~~~~~~gt~~Y~APE~l~g~~~~s~   76 (468)
                      +.||+.||.|||+.||+|+||||+|||++.++.+||+|||++........    .......++.+|+|||.+.+...++.
T Consensus       113 ~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  192 (337)
T cd07852         113 MYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTK  192 (337)
T ss_pred             HHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccc
Confidence            36899999999999999999999999999999999999999875543221    12334567899999999876666889


Q ss_pred             CcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccc-cCC-CCCCCCchhhhhcCCCcHHHH
Q 012191           77 SVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHAT-LFK-PQQPYDSSLRETFKDLPTTAV  154 (468)
Q Consensus        77 ~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~-~~~-~~~~~~~~l~~~~~~~s~~l~  154 (468)
                      ++|||||||++|+|++|++||.+....+....+....+.++...+......... .+. -.......+...++.++.++.
T Consensus       193 ~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  272 (337)
T cd07852         193 GVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDAL  272 (337)
T ss_pred             cchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHH
Confidence            999999999999999999999998888888888888777765544332111000 000 000111123444566899999


Q ss_pred             HHHHHhcCCCCCCCcCHHHHHhcccccCC
Q 012191          155 NLIETLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       155 dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      +||.+||+.||.+|||+.++|+||||+..
T Consensus       273 ~li~~~l~~~P~~Rps~~~il~~~~~~~~  301 (337)
T cd07852         273 DLLKKLLVFNPNKRLTAEEALEHPYVAQF  301 (337)
T ss_pred             HHHHHhccCCcccccCHHHHhhChhhhhh
Confidence            99999999999999999999999999774


No 141
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.94  E-value=2.4e-27  Score=240.10  Aligned_cols=154  Identities=25%  Similarity=0.423  Sum_probs=119.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+||||||+|||++.++.+||+|||++...... .......+||+.|+|||++.+ ..++.++||
T Consensus       102 ~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di  179 (329)
T cd05588         102 SAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP-GDTTSTFCGTPNYIAPEILRG-EDYGFSVDW  179 (329)
T ss_pred             HHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccC-CCccccccCCccccCHHHHcC-CCCCCccce
Confidence            369999999999999999999999999999999999999998642211 122334578999999999976 568899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCch--------HHH-HHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcH
Q 012191           81 WSVGCVFAELLIGKPILQGRTE--------VEQ-LHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPT  151 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~--------~e~-l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~  151 (468)
                      |||||++|+|++|..||.....        .+. ...+....  .                           .....++.
T Consensus       180 wslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~--~---------------------------~~p~~~~~  230 (329)
T cd05588         180 WALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQ--I---------------------------RIPRSLSV  230 (329)
T ss_pred             echHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCC--C---------------------------CCCCCCCH
Confidence            9999999999999999963211        111 11111100  0                           01124678


Q ss_pred             HHHHHHHHhcCCCCCCCcC------HHHHHhcccccCCCC
Q 012191          152 TAVNLIETLLSVEPYKRAT------ASAALASEYFSTKPY  185 (468)
Q Consensus       152 ~l~dLL~~mL~~DP~kRpT------a~e~L~Hp~F~~~p~  185 (468)
                      .+.+||.+||+.||.+|+|      +.+++.||||....|
T Consensus       231 ~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~~~  270 (329)
T cd05588         231 KASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNIDW  270 (329)
T ss_pred             HHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCCCH
Confidence            8999999999999999987      799999999976544


No 142
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the 
Probab=99.94  E-value=2e-27  Score=236.80  Aligned_cols=179  Identities=42%  Similarity=0.755  Sum_probs=134.8

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECC----CCcEEEEecCCccccCCCCC--CCccccccCCcccChhhhcCCCCCC
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNN----EGVLKLADFGLANFSNTGHR--QPLTSRVVTLWYRPPELLLGATDYG   75 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~----~g~vKL~DFGla~~~~~~~~--~~~~~~~gt~~Y~APE~l~g~~~~s   75 (468)
                      .||+.||.|||+.||+|+||||+|||++.    ++.+||+|||++........  .......++.+|+|||++.+...++
T Consensus       115 ~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  194 (316)
T cd07842         115 WQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYT  194 (316)
T ss_pred             HHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCC
Confidence            68999999999999999999999999999    89999999999876543322  1123346788999999988766688


Q ss_pred             CCcceeeeehhhhhhhhcCCCCCCCch---------HHHHHHHHHHcCCCCchhhhccC-CCcccc---CCCCCCCC-ch
Q 012191           76 PSVDLWSVGCVFAELLIGKPILQGRTE---------VEQLHKIFKLCGSPPDDYWKKSK-LPHATL---FKPQQPYD-SS  141 (468)
Q Consensus        76 ~~sDIWSLG~ILyeLltG~~pf~g~~~---------~e~l~~i~~~~g~p~~~~~~~~~-~~~~~~---~~~~~~~~-~~  141 (468)
                      .++|||||||++|+|++|.+||.+...         ...+..++..++.+....|.... .+....   ......+. ..
T Consensus       195 ~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (316)
T cd07842         195 KAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNS  274 (316)
T ss_pred             cHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCcc
Confidence            999999999999999999999986543         23566777777777766554311 111111   00011111 11


Q ss_pred             hh---hhcCCCcHHHHHHHHHhcCCCCCCCcCHHHHHhcccc
Q 012191          142 LR---ETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       142 l~---~~~~~~s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      +.   +.+...+..+.++|.+||+.||.+|||+.+++.||||
T Consensus       275 ~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         275 LAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             HHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence            11   1223678899999999999999999999999999998


No 143
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.94  E-value=5e-27  Score=230.16  Aligned_cols=175  Identities=41%  Similarity=0.762  Sum_probs=137.9

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++......  .......++..|+|||.+.+ ..++.++||
T Consensus       113 ~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~~~~~PE~~~~-~~~~~~~Di  189 (287)
T cd07838         113 MRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFE--MALTSVVVTLWYRAPEVLLQ-SSYATPVDM  189 (287)
T ss_pred             HHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccCC--cccccccccccccChHHhcc-CCCCCcchh
Confidence            368999999999999999999999999999999999999998765433  22233457889999999976 457889999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|.+||.+.+..+.+.+++...+.+....|..........+...  .........+.++..+.+||.+|
T Consensus       190 ~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~  267 (287)
T cd07838         190 WSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSY--TPRSFKSFVPEICEEGLDLLKKM  267 (287)
T ss_pred             hhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccc--cccchhhhhhhhhHHHHHHHHHH
Confidence            9999999999999999999999999999888776665544432221111111111  11122444456788899999999


Q ss_pred             cCCCCCCCcCHHHHHhcccc
Q 012191          161 LSVEPYKRATASAALASEYF  180 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F  180 (468)
                      |+.||.+|||+.++|.||||
T Consensus       268 l~~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         268 LTFNPHKRISAFEALQHPYF  287 (287)
T ss_pred             hccCCccCCCHHHHhcCcCC
Confidence            99999999999999999998


No 144
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.94  E-value=3.3e-27  Score=240.33  Aligned_cols=180  Identities=38%  Similarity=0.684  Sum_probs=142.2

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||+|||+.||+|+||||+||+++.++.++|+|||++......    .....+++.|++||.+.+...++.++|+
T Consensus       124 ~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di  199 (343)
T cd07880         124 VYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSE----MTGYVVTRWYRAPEVILNWMHYTQTVDI  199 (343)
T ss_pred             HHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccccC----ccccccCCcccCHHHHhCCCCCCcHHHH
Confidence            369999999999999999999999999999999999999998755432    2344668899999998765567889999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCC--CCCchhhhhcCCCcHHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQ--PYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |||||++|+|++|.+||.+.+....+..+++..+.++..++..........+....  .....+......++..+.+||.
T Consensus       200 ~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  279 (343)
T cd07880         200 WSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLE  279 (343)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHH
Confidence            99999999999999999998888888888887777766655443221111110000  0111233445678899999999


Q ss_pred             HhcCCCCCCCcCHHHHHhcccccCCC
Q 012191          159 TLLSVEPYKRATASAALASEYFSTKP  184 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~Hp~F~~~p  184 (468)
                      +||+.||.+|||+.++|.||||+...
T Consensus       280 ~~l~~dP~~R~t~~~~l~~~~~~~~~  305 (343)
T cd07880         280 KMLVLDAESRITAAEALAHPYFEEFH  305 (343)
T ss_pred             HHcCCChhhCCCHHHHhcCccHhhhc
Confidence            99999999999999999999998753


No 145
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.94  E-value=3.3e-27  Score=238.46  Aligned_cols=154  Identities=29%  Similarity=0.459  Sum_probs=126.8

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+||||||+|||++.++.+||+|||++....... .......||+.|+|||++.+ ..++.++||
T Consensus       107 ~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di  184 (323)
T cd05615         107 AAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG-VTTRTFCGTPDYIAPEIIAY-QPYGKSVDW  184 (323)
T ss_pred             HHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCC-ccccCccCCccccCHHHHcC-CCCCCccch
Confidence            3689999999999999999999999999999999999999986543221 12234568999999999876 468899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||+||++|+|++|.+||.+......+..+.......                             ...++.++.+||.+|
T Consensus       185 wslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~-----------------------------p~~~~~~~~~li~~~  235 (323)
T cd05615         185 WAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSY-----------------------------PKSLSKEAVSICKGL  235 (323)
T ss_pred             hhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC-----------------------------CccCCHHHHHHHHHH
Confidence            999999999999999999888777766665421111                             124678899999999


Q ss_pred             cCCCCCCCcC-----HHHHHhcccccCCCC
Q 012191          161 LSVEPYKRAT-----ASAALASEYFSTKPY  185 (468)
Q Consensus       161 L~~DP~kRpT-----a~e~L~Hp~F~~~p~  185 (468)
                      |..||.+|++     ..++++||||....|
T Consensus       236 l~~~p~~R~~~~~~~~~~i~~h~~f~~~~~  265 (323)
T cd05615         236 MTKHPSKRLGCGPEGERDIREHAFFRRIDW  265 (323)
T ss_pred             cccCHhhCCCCCCCCHHHHhcCcccCCCCH
Confidence            9999999997     579999999987544


No 146
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.94  E-value=3.3e-27  Score=239.02  Aligned_cols=178  Identities=25%  Similarity=0.321  Sum_probs=123.4

Q ss_pred             HHHHHHHHHHHhC-CCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSR-GVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~-gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.||.|||+. +|+|+||||+|||++.++.++|+|||++......   ......+|+.|+|||++.+ ..++.++||
T Consensus       110 ~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~~~~g~~~y~aPE~~~~-~~~~~~~Di  185 (331)
T cd06649         110 IAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQG-THYSVQSDI  185 (331)
T ss_pred             HHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccccc---ccccCCCCcCcCCHhHhcC-CCCCchHhH
Confidence            6899999999986 6999999999999999999999999998755432   2234578999999999976 458999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhcc-CCCcc--ccCC----CCCCCCc--h-h--------
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKS-KLPHA--TLFK----PQQPYDS--S-L--------  142 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~-~~~~~--~~~~----~~~~~~~--~-l--------  142 (468)
                      |||||++|+|++|..||...+..+....+...........+... .....  ....    ...+...  . +        
T Consensus       186 wslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (331)
T cd06649         186 WSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPP  265 (331)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCC
Confidence            99999999999999999877655433322111100001000000 00000  0000    0000000  0 0        


Q ss_pred             -hhhcCCCcHHHHHHHHHhcCCCCCCCcCHHHHHhcccccCC
Q 012191          143 -RETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       143 -~~~~~~~s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                       ......++.++++||.+||.+||++|||+.++|+||||+..
T Consensus       266 ~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~  307 (331)
T cd06649         266 PKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRS  307 (331)
T ss_pred             cCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence             00012467899999999999999999999999999999864


No 147
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.94  E-value=5.3e-27  Score=238.62  Aligned_cols=182  Identities=36%  Similarity=0.638  Sum_probs=134.5

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECC-CCcEEEEecCCccccCCCCC--CCccccccCCcccChhhhcCCCCCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNN-EGVLKLADFGLANFSNTGHR--QPLTSRVVTLWYRPPELLLGATDYGPS   77 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~-~g~vKL~DFGla~~~~~~~~--~~~~~~~gt~~Y~APE~l~g~~~~s~~   77 (468)
                      +.||+.||.|||+.||+|+||||+||+++. ++.++|+|||++........  .......++..|+|||.+.+...++.+
T Consensus       120 ~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~  199 (342)
T cd07854         120 MYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKA  199 (342)
T ss_pred             HHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCch
Confidence            469999999999999999999999999975 45789999999875532211  111233578899999988765668889


Q ss_pred             cceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhcc--CCCccccCCCCCCCCchhhhhcCCCcHHHHH
Q 012191           78 VDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKS--KLPHATLFKPQQPYDSSLRETFKDLPTTAVN  155 (468)
Q Consensus        78 sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~d  155 (468)
                      +|||||||++|+|++|..||.+.+..+....+...........+...  ..+. ............+....+.++.++.+
T Consensus       200 ~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (342)
T cd07854         200 IDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPS-FVRNDGGEPRRPLRDLLPGVNPEALD  278 (342)
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhh-hhhhcccccCCCHHHHccCCCHHHHH
Confidence            99999999999999999999988887777776654433322211110  0000 00001112222344555678899999


Q ss_pred             HHHHhcCCCCCCCcCHHHHHhcccccCC
Q 012191          156 LIETLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       156 LL~~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      ||.+||+.||.+|||+.++|.||||+..
T Consensus       279 li~~~L~~dP~~R~t~~ell~h~~~~~~  306 (342)
T cd07854         279 FLEQILTFNPMDRLTAEEALMHPYMSCY  306 (342)
T ss_pred             HHHHHhCCCchhccCHHHHhCCCccccc
Confidence            9999999999999999999999999864


No 148
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.94  E-value=2.7e-27  Score=233.25  Aligned_cols=157  Identities=24%  Similarity=0.422  Sum_probs=122.0

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      .||+.||+|||+.||+||||||+|||++.++.++|+|||++......  .......++..|+|||++.+. .++.++|||
T Consensus       102 ~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~-~~~~~~Dvw  178 (277)
T cd05607         102 AQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG--KTITQRAGTNGYMAPEILKEE-PYSYPVDWF  178 (277)
T ss_pred             HHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC--ceeeccCCCCCccCHHHHccC-CCCCchhHH
Confidence            58999999999999999999999999999999999999998765432  223345688999999999774 489999999


Q ss_pred             eeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhc
Q 012191           82 SVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLL  161 (468)
Q Consensus        82 SLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL  161 (468)
                      ||||++|+|++|..||.+.........+.......                        .+......++.++.+||.+||
T Consensus       179 slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~li~~~L  234 (277)
T cd05607         179 AMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLED------------------------EVKFEHQNFTEESKDICRLFL  234 (277)
T ss_pred             HHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcc------------------------ccccccccCCHHHHHHHHHHh
Confidence            99999999999999997643322111111110000                        000011357889999999999


Q ss_pred             CCCCCCCcCH----HHHHhcccccCCCC
Q 012191          162 SVEPYKRATA----SAALASEYFSTKPY  185 (468)
Q Consensus       162 ~~DP~kRpTa----~e~L~Hp~F~~~p~  185 (468)
                      +.||.+|||+    .+++.|+||....+
T Consensus       235 ~~~P~~R~~~~~~~~~~~~h~~f~~~~~  262 (277)
T cd05607         235 AKKPEDRLGSREKNDDPRKHEFFKTINF  262 (277)
T ss_pred             ccCHhhCCCCccchhhhhcChhhcCCCH
Confidence            9999999999    77889999987654


No 149
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.94  E-value=1.1e-26  Score=228.01  Aligned_cols=177  Identities=41%  Similarity=0.709  Sum_probs=140.5

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      .||+.||.|||++||+|+||+|+||+++.++.++|+|||++......  .......++..|+|||.+.+...++.++|+|
T Consensus       106 ~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~  183 (283)
T cd07830         106 YQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR--PPYTDYVSTRWYRAPEILLRSTSYSSPVDIW  183 (283)
T ss_pred             HHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCC--CCcCCCCCcccccCceeeecCcCcCCccchh
Confidence            58999999999999999999999999999999999999998765432  2234456788999999987656688999999


Q ss_pred             eeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccc-cCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           82 SVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHAT-LFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        82 SLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||||++++|++|.+||.+....+.+..+....+.+....|......... ...........+...+...+..+.+||.+|
T Consensus       184 s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  263 (283)
T cd07830         184 ALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDM  263 (283)
T ss_pred             hHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHh
Confidence            9999999999999999999999999999888888877666542211110 000000011123344445578899999999


Q ss_pred             cCCCCCCCcCHHHHHhcccc
Q 012191          161 LSVEPYKRATASAALASEYF  180 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F  180 (468)
                      |..||.+|||+.|++.||||
T Consensus       264 l~~~p~~Rpt~~ei~~~~~~  283 (283)
T cd07830         264 LRWDPKKRPTASQALQHPYF  283 (283)
T ss_pred             cccCcccCCCHHHHhhCCCC
Confidence            99999999999999999998


No 150
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.94  E-value=5.2e-27  Score=237.39  Aligned_cols=155  Identities=25%  Similarity=0.450  Sum_probs=120.7

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||+|||++||+||||||+|||++.++.+||+|||++....... ......+||+.|+|||++.+ ..++.++||
T Consensus       102 ~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di  179 (327)
T cd05617         102 AAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG-DTTSTFCGTPNYIAPEILRG-EEYGFSVDW  179 (327)
T ss_pred             HHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCC-CceecccCCcccCCHHHHCC-CCCCchhee
Confidence            3699999999999999999999999999999999999999986432211 22344578999999999976 468999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCch------HHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTE------VEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAV  154 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~------~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~  154 (468)
                      |||||++|+|++|..||.....      .+.+..+..  ..+.                          .....++..+.
T Consensus       180 wslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~--------------------------~~p~~~~~~~~  231 (327)
T cd05617         180 WALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVIL--EKPI--------------------------RIPRFLSVKAS  231 (327)
T ss_pred             ehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHH--hCCC--------------------------CCCCCCCHHHH
Confidence            9999999999999999964321      112222111  0000                          01124678899


Q ss_pred             HHHHHhcCCCCCCCcC------HHHHHhcccccCCCC
Q 012191          155 NLIETLLSVEPYKRAT------ASAALASEYFSTKPY  185 (468)
Q Consensus       155 dLL~~mL~~DP~kRpT------a~e~L~Hp~F~~~p~  185 (468)
                      +||.+||+.||.+|++      +.+++.||||....|
T Consensus       232 ~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~~~  268 (327)
T cd05617         232 HVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSIDW  268 (327)
T ss_pred             HHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCCCH
Confidence            9999999999999998      579999999988654


No 151
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.94  E-value=4.4e-27  Score=236.31  Aligned_cols=166  Identities=29%  Similarity=0.413  Sum_probs=135.4

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCC---------------------------------C
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNT---------------------------------G   48 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~---------------------------------~   48 (468)
                      -+|+.||+|||..|||+|||||+||||-++|.|-|+||.++.....                                 .
T Consensus       186 AEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~  265 (459)
T KOG0610|consen  186 AEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSS  265 (459)
T ss_pred             HHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhcc
Confidence            3689999999999999999999999999999999999988632110                                 0


Q ss_pred             CC----------------------CCccccccCCcccChhhhcCCCCCCCCcceeeeehhhhhhhhcCCCCCCCchHHHH
Q 012191           49 HR----------------------QPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQL  106 (468)
Q Consensus        49 ~~----------------------~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l  106 (468)
                      ..                      ....+.+||-.|+|||++.|. .-+.++|+|+|||+|||||.|..||.|.+..+.+
T Consensus       266 ~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~-GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl  344 (459)
T KOG0610|consen  266 SKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGE-GHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETL  344 (459)
T ss_pred             ccccccccccccccchhhhcCCCCccccccccccccccceeeecC-CCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhH
Confidence            00                      111356889999999999984 4689999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhcCCCCCCCcC----HHHHHhcccccC
Q 012191          107 HKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRAT----ASAALASEYFST  182 (468)
Q Consensus       107 ~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL~~DP~kRpT----a~e~L~Hp~F~~  182 (468)
                      .+|+..--..+.                           .+.++..++|||+++|..||.+|+.    |.||-+||||..
T Consensus       345 ~NIv~~~l~Fp~---------------------------~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~g  397 (459)
T KOG0610|consen  345 RNIVGQPLKFPE---------------------------EPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEG  397 (459)
T ss_pred             HHHhcCCCcCCC---------------------------CCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccC
Confidence            998653222221                           1256789999999999999999998    999999999999


Q ss_pred             CCCCCCCCCCCCC
Q 012191          183 KPYACDLSSLPIY  195 (468)
Q Consensus       183 ~p~~~~~~~~p~~  195 (468)
                      ..|+.-....|.+
T Consensus       398 VnWaLir~~~PP~  410 (459)
T KOG0610|consen  398 VNWALIRCARPPE  410 (459)
T ss_pred             CChhheeccCCCc
Confidence            9888544444444


No 152
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.94  E-value=6.2e-27  Score=254.06  Aligned_cols=176  Identities=24%  Similarity=0.368  Sum_probs=124.0

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECC-CCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCC-------
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNN-EGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGAT-------   72 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~-~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~-------   72 (468)
                      +.||+.||.|||++||+||||||+|||++. ++.+||+|||++..............++++.|+|||.+....       
T Consensus       261 ~~qll~aL~yLH~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~  340 (566)
T PLN03225        261 MRQILFALDGLHSTGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPS  340 (566)
T ss_pred             HHHHHHHHHHHHHCCEEeCcCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCcc
Confidence            468999999999999999999999999986 578999999999765543333345567899999999764321       


Q ss_pred             --------------CCCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCC
Q 012191           73 --------------DYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPY  138 (468)
Q Consensus        73 --------------~~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~  138 (468)
                                    .++.++||||||||||||+++..  ........+..++..++.... .|.......   +.+.   
T Consensus       341 ~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~--~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~---~~~~---  411 (566)
T PLN03225        341 APVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNL--RSDSNLIQFNRQLKRNDYDLV-AWRKLVEPR---ASPD---  411 (566)
T ss_pred             ccccccccchhccccCCCCcccHHHHHHHHHHHhCcC--CCchHHHHHHHHHHhcCCcHH-HHHHhhccc---cchh---
Confidence                          23456799999999999998654  444555566666655544322 222111000   0000   


Q ss_pred             CchhhhhcCCCcHHHHHHHHHhcCCCCCCCcCHHHHHhcccccCCCC
Q 012191          139 DSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPY  185 (468)
Q Consensus       139 ~~~l~~~~~~~s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~p~  185 (468)
                      .....+.+......+.+||.+||++||.+|||+.++|+||||+....
T Consensus       412 ~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~  458 (566)
T PLN03225        412 LRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREGL  458 (566)
T ss_pred             hhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCCc
Confidence            00011222334556789999999999999999999999999987544


No 153
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.94  E-value=8.6e-27  Score=237.49  Aligned_cols=181  Identities=38%  Similarity=0.656  Sum_probs=139.5

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||+|||++||+|+||||+||+++.++.++|+|||++.....    ......++.+|+|||++.+...++.++||
T Consensus       126 ~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv  201 (345)
T cd07877         126 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----EMTGYVATRWYRAPEIMLNWMHYNQTVDI  201 (345)
T ss_pred             HHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccccccc----cccccccCCCccCHHHHhCccCCCchhhH
Confidence            36999999999999999999999999999999999999999875432    22345678999999998775668899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCC--CCchhhhhcCCCcHHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQP--YDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |||||++|+|++|.+||.+......+..+....+.++...+..........+....+  ....+...+...++.+.+||.
T Consensus       202 wslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  281 (345)
T cd07877         202 WSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLE  281 (345)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHH
Confidence            999999999999999999888888888887777776665543322111000000000  001122223356888999999


Q ss_pred             HhcCCCCCCCcCHHHHHhcccccCCCC
Q 012191          159 TLLSVEPYKRATASAALASEYFSTKPY  185 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~Hp~F~~~p~  185 (468)
                      +||+.||.+|+|+.++|.||||.....
T Consensus       282 ~~L~~dp~~R~t~~e~l~h~~f~~~~~  308 (345)
T cd07877         282 KMLVLDSDKRITAAQALAHAYFAQYHD  308 (345)
T ss_pred             HHcCCChhhcCCHHHHhcChhhhhcCC
Confidence            999999999999999999999997533


No 154
>PF00069 Pkinase:  Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain;  InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.94  E-value=3.2e-27  Score=227.99  Aligned_cols=157  Identities=31%  Similarity=0.482  Sum_probs=123.1

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.+||+.||+|+||||+||+++.++.++|+|||.+.... ..........++..|+|||++.....++.++||
T Consensus       104 ~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di  182 (260)
T PF00069_consen  104 AYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLS-ENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDI  182 (260)
T ss_dssp             HHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEEST-STTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccccccccccccc
Confidence            3699999999999999999999999999999999999999987542 222344566789999999998734568999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|..||...........+...........+                      ......+..+.+||.+|
T Consensus       183 ~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~l~~li~~~  240 (260)
T PF00069_consen  183 WSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSS----------------------QQSREKSEELRDLIKKM  240 (260)
T ss_dssp             HHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHT----------------------TSHTTSHHHHHHHHHHH
T ss_pred             cccccccccccccccccccccchhhhhhhhhcccccccccc----------------------cccchhHHHHHHHHHHH
Confidence            99999999999999999987444444444332221111000                      00012347899999999


Q ss_pred             cCCCCCCCcCHHHHHhcccc
Q 012191          161 LSVEPYKRATASAALASEYF  180 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F  180 (468)
                      |+.||.+|||+.++++||||
T Consensus       241 l~~~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  241 LSKDPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             SSSSGGGSTTHHHHHTSGGG
T ss_pred             ccCChhHCcCHHHHhcCCCC
Confidence            99999999999999999998


No 155
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.94  E-value=1.1e-26  Score=235.35  Aligned_cols=161  Identities=25%  Similarity=0.398  Sum_probs=126.3

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCC----CCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGA----TDYGP   76 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~----~~~s~   76 (468)
                      +.||+.||+|||++||+||||||+|||++.++.+||+|||++...............||+.|+|||++.+.    ..++.
T Consensus       108 ~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  187 (331)
T cd05624         108 IAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGP  187 (331)
T ss_pred             HHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCC
Confidence            36999999999999999999999999999999999999999876554322222335689999999998642    35788


Q ss_pred             CcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHH
Q 012191           77 SVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNL  156 (468)
Q Consensus        77 ~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dL  156 (468)
                      ++|||||||++|+|++|..||.+....+.+..+......++                        +...+..++..+++|
T Consensus       188 ~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~------------------------~p~~~~~~~~~~~~l  243 (331)
T cd05624         188 ECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQ------------------------FPSHITDVSEEAKDL  243 (331)
T ss_pred             cccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCccc------------------------CCCccccCCHHHHHH
Confidence            99999999999999999999998877766666543211110                        011124578999999


Q ss_pred             HHHhcCCCCCC--CcCHHHHHhcccccCCCC
Q 012191          157 IETLLSVEPYK--RATASAALASEYFSTKPY  185 (468)
Q Consensus       157 L~~mL~~DP~k--RpTa~e~L~Hp~F~~~p~  185 (468)
                      |.+||..++.+  |+++.+++.|+||....|
T Consensus       244 i~~ll~~~~~~~~~~~~~~~~~h~~f~~~~~  274 (331)
T cd05624         244 IQRLICSRERRLGQNGIEDFKKHAFFEGIDW  274 (331)
T ss_pred             HHHHccCchhhcCCCCHHHHhcCCCcCCCCH
Confidence            99999976654  579999999999987544


No 156
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94  E-value=4.4e-27  Score=242.88  Aligned_cols=156  Identities=28%  Similarity=0.537  Sum_probs=118.3

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCc-cccccCCcccChhhhcCC---------
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL-TSRVVTLWYRPPELLLGA---------   71 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~-~~~~gt~~Y~APE~l~g~---------   71 (468)
                      +|||.||.++|..||||.||||.|+|+- .|.+||+|||.|..+........ ...+||+.||+||.+...         
T Consensus       467 kqML~aV~~IH~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~  545 (677)
T KOG0596|consen  467 KQMLLAVKTIHQHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKS  545 (677)
T ss_pred             HHHHHHHHHHHHhceeecCCCcccEEEE-eeeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCc
Confidence            6999999999999999999999999985 48999999999987765543322 367999999999998632         


Q ss_pred             -CCCCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCc
Q 012191           72 -TDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLP  150 (468)
Q Consensus        72 -~~~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s  150 (468)
                       ...+.++||||||||||+|+.|++||..-.  .++.++.... .|..                        .-.|+.++
T Consensus       546 k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~--n~~aKl~aI~-~P~~------------------------~Iefp~~~  598 (677)
T KOG0596|consen  546 KIKISRKSDVWSLGCILYQMVYGKTPFGQII--NQIAKLHAIT-DPNH------------------------EIEFPDIP  598 (677)
T ss_pred             ceeecCccchhhhhhHHHHHHhcCCchHHHH--HHHHHHHhhc-CCCc------------------------cccccCCC
Confidence             125678999999999999999999996422  1222332221 1110                        00112222


Q ss_pred             --HHHHHHHHHhcCCCCCCCcCHHHHHhcccccCCCC
Q 012191          151 --TTAVNLIETLLSVEPYKRATASAALASEYFSTKPY  185 (468)
Q Consensus       151 --~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~p~  185 (468)
                        .++.+++..||..||.+|||+.++|+|||++-.+.
T Consensus       599 ~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~~i  635 (677)
T KOG0596|consen  599 ENDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQPI  635 (677)
T ss_pred             CchHHHHHHHHHHhcCcccCCCcHHHhcCcccccccc
Confidence              23899999999999999999999999999885433


No 157
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as 
Probab=99.94  E-value=4.2e-27  Score=233.05  Aligned_cols=157  Identities=26%  Similarity=0.470  Sum_probs=122.6

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.||+|+||||+||+++.++.++|+|||++.......  ......|+..|+|||++.+ ..++.++||
T Consensus       108 ~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~--~~~~~~g~~~y~aPE~~~~-~~~~~~~Di  184 (285)
T cd05630         108 AAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ--TIKGRVGTVGYMAPEVVKN-ERYTFSPDW  184 (285)
T ss_pred             HHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc--cccCCCCCccccChHHHcC-CCCCCcccc
Confidence            3689999999999999999999999999999999999999987554321  2234578999999999976 458899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||+||++|+|++|.+||.+..................                         ......+++++.+||.+|
T Consensus       185 wslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~li~~~  239 (285)
T cd05630         185 WALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQ-------------------------EEYSEKFSPDARSLCKML  239 (285)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhh-------------------------hhcCccCCHHHHHHHHHH
Confidence            9999999999999999987543221111111110000                         011135778899999999


Q ss_pred             cCCCCCCCcC-----HHHHHhcccccCCCC
Q 012191          161 LSVEPYKRAT-----ASAALASEYFSTKPY  185 (468)
Q Consensus       161 L~~DP~kRpT-----a~e~L~Hp~F~~~p~  185 (468)
                      |+.||.+|||     +.++++||||....+
T Consensus       240 l~~~p~~R~s~~~~~~~~~~~h~~~~~~~~  269 (285)
T cd05630         240 LCKDPKERLGCQGGGAREVKEHPLFKQINF  269 (285)
T ss_pred             hhcCHHHccCCCCCchHHHHcChhhhccCH
Confidence            9999999999     999999999986433


No 158
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.94  E-value=4.9e-27  Score=251.49  Aligned_cols=153  Identities=27%  Similarity=0.414  Sum_probs=126.7

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC-CCccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR-QPLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~-~~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +.||+.||.|||+.||+||||||+|||++.++.+||+|||++..+..... ......+||+.|+|||++.+ ..|+.++|
T Consensus       149 ~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~-~~~s~k~D  227 (496)
T PTZ00283        149 FIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRR-KPYSKKAD  227 (496)
T ss_pred             HHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCC-CCCCcHHH
Confidence            36999999999999999999999999999999999999999876543211 22234578999999999976 45899999


Q ss_pred             eeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           80 LWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        80 IWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      ||||||++|+|++|..||.+.+..+.+..+......                            .....+++++.+||.+
T Consensus       228 VwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~l~~li~~  279 (496)
T PTZ00283        228 MFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYD----------------------------PLPPSISPEMQEIVTA  279 (496)
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCC----------------------------CCCCCCCHHHHHHHHH
Confidence            999999999999999999988776666655331110                            0113578899999999


Q ss_pred             hcCCCCCCCcCHHHHHhcccccC
Q 012191          160 LLSVEPYKRATASAALASEYFST  182 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~Hp~F~~  182 (468)
                      ||+.||.+|||+.++|.|||+..
T Consensus       280 ~L~~dP~~RPs~~ell~~p~~~~  302 (496)
T PTZ00283        280 LLSSDPKRRPSSSKLLNMPICKL  302 (496)
T ss_pred             HcccChhhCcCHHHHHhCHHHHH
Confidence            99999999999999999999875


No 159
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.94  E-value=7.5e-27  Score=226.36  Aligned_cols=152  Identities=30%  Similarity=0.464  Sum_probs=121.2

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCc--cccccCCcccChhhhcCCCCCCCCc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL--TSRVVTLWYRPPELLLGATDYGPSV   78 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~--~~~~gt~~Y~APE~l~g~~~~s~~s   78 (468)
                      +.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++...........  ....++..|+|||++.+. .++.++
T Consensus       110 ~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~  188 (263)
T cd06625         110 TRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGE-GYGRKA  188 (263)
T ss_pred             HHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceeccccccccccccCCCcCccccCcceeccC-CCCchh
Confidence            36899999999999999999999999999999999999999875543211111  234578899999999874 488999


Q ss_pred             ceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           79 DLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        79 DIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |||||||++|+|++|+.||...........+......                           ......++..+.+||.
T Consensus       189 Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~li~  241 (263)
T cd06625         189 DVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTN---------------------------PQLPSHVSPDARNFLR  241 (263)
T ss_pred             hhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCC---------------------------CCCCccCCHHHHHHHH
Confidence            9999999999999999999876555444443221100                           0111357788999999


Q ss_pred             HhcCCCCCCCcCHHHHHhcccc
Q 012191          159 TLLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      +||..||.+|||+.++|.|+||
T Consensus       242 ~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         242 RTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             HHhhcCcccCCCHHHHhhCCCC
Confidence            9999999999999999999998


No 160
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.94  E-value=2.2e-27  Score=222.75  Aligned_cols=180  Identities=33%  Similarity=0.632  Sum_probs=140.0

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCC-CcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNE-GVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~-g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      |+|||.||.|||++||+|||+||.|++|+.. ..++|+|+|+|.++.++  .....++.+..|--||++.....|+.+-|
T Consensus       138 ~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~--~eYnVRVASRyfKGPELLVdy~~YDYSLD  215 (338)
T KOG0668|consen  138 IYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG--KEYNVRVASRYFKGPELLVDYQMYDYSLD  215 (338)
T ss_pred             HHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCC--ceeeeeeehhhcCCchheeechhccccHH
Confidence            5799999999999999999999999999865 46999999999998876  34566788899999999999888999999


Q ss_pred             eeeeehhhhhhhhcCCC-CCCCchHHHHHHHHHHcCCCCch-hhhccCCCccccCCC------CCCCCchhh-hhcCCCc
Q 012191           80 LWSVGCVFAELLIGKPI-LQGRTEVEQLHKIFKLCGSPPDD-YWKKSKLPHATLFKP------QQPYDSSLR-ETFKDLP  150 (468)
Q Consensus        80 IWSLG~ILyeLltG~~p-f~g~~~~e~l~~i~~~~g~p~~~-~~~~~~~~~~~~~~~------~~~~~~~l~-~~~~~~s  150 (468)
                      +|||||+|+.|+..+.| |.|.++.+|+-+|.+.+|...-. +..+..+.....|..      ..++..-+. +.-.-.+
T Consensus       216 ~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~  295 (338)
T KOG0668|consen  216 MWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVS  295 (338)
T ss_pred             HHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCC
Confidence            99999999999997755 57889999999999999874322 222222211111111      001111111 1112346


Q ss_pred             HHHHHHHHHhcCCCCCCCcCHHHHHhcccccC
Q 012191          151 TTAVNLIETLLSVEPYKRATASAALASEYFST  182 (468)
Q Consensus       151 ~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~  182 (468)
                      +++.|||.++|.+|-.+|+||.|++.||||..
T Consensus       296 peaiDlldklLrYDHqeRlTakEam~HpyF~~  327 (338)
T KOG0668|consen  296 PEAIDLLDKLLRYDHQERLTAKEAMAHPYFAP  327 (338)
T ss_pred             hHHHHHHHHHHhhccccccchHHHhcCchHHH
Confidence            99999999999999999999999999999975


No 161
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.94  E-value=9e-27  Score=230.46  Aligned_cols=157  Identities=26%  Similarity=0.467  Sum_probs=127.0

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.||+|+||||+||+++.++.++|+|||++......  .......++..|+|||.+.+ ..++.++|+
T Consensus       108 ~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~--~~~~~~~g~~~~~aPE~~~~-~~~~~~~Di  184 (285)
T cd05632         108 AAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG--ESIRGRVGTVGYMAPEVLNN-QRYTLSPDY  184 (285)
T ss_pred             HHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCC--CcccCCCCCcCccChHHhcC-CCCCcccch
Confidence            368999999999999999999999999999999999999998654332  22244578999999999976 458899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|..||.+.........+..........                         ....++..+.+||..|
T Consensus       185 ~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~li~~~  239 (285)
T cd05632         185 WGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEV-------------------------YSAKFSEEAKSICKML  239 (285)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccc-------------------------cCccCCHHHHHHHHHH
Confidence            999999999999999998876655544443322111110                         1135778899999999


Q ss_pred             cCCCCCCCcC-----HHHHHhcccccCCCC
Q 012191          161 LSVEPYKRAT-----ASAALASEYFSTKPY  185 (468)
Q Consensus       161 L~~DP~kRpT-----a~e~L~Hp~F~~~p~  185 (468)
                      |+.||.+|||     +.+++.|+||...++
T Consensus       240 l~~~P~~R~~~~~~~~~~l~~~~~~~~~~~  269 (285)
T cd05632         240 LTKDPKQRLGCQEEGAGEVKRHPFFRNMNF  269 (285)
T ss_pred             ccCCHhHcCCCcccChHHHHcChhhhcCCH
Confidence            9999999999     899999999998654


No 162
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.94  E-value=2.9e-27  Score=237.45  Aligned_cols=155  Identities=30%  Similarity=0.504  Sum_probs=130.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCC------CcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNE------GVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDY   74 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~------g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~   74 (468)
                      |+||+.||++||+++||||||||.||||+..      -.+||+|||+|+.+.++  ......+|++.|||||++.. ..|
T Consensus       115 m~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~--~~a~tlcGSplYMAPEV~~~-~~Y  191 (429)
T KOG0595|consen  115 MQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPG--SMAETLCGSPLYMAPEVIMS-QQY  191 (429)
T ss_pred             HHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCch--hHHHHhhCCccccCHHHHHh-ccc
Confidence            6899999999999999999999999999765      46899999999988764  34567799999999999964 579


Q ss_pred             CCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHH
Q 012191           75 GPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAV  154 (468)
Q Consensus        75 s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~  154 (468)
                      +.++|+||+|+|||+|++|++||...+..+.+..+.+.....+.                          .-..++..+.
T Consensus       192 dAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~--------------------------~~~~~s~~~~  245 (429)
T KOG0595|consen  192 DAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPV--------------------------LPAELSNPLR  245 (429)
T ss_pred             cchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCc--------------------------hhhhccCchh
Confidence            99999999999999999999999999998888866442211110                          0123556677


Q ss_pred             HHHHHhcCCCCCCCcCHHHHHhcccccCCC
Q 012191          155 NLIETLLSVEPYKRATASAALASEYFSTKP  184 (468)
Q Consensus       155 dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~p  184 (468)
                      +|+..+|..+|..|.+..+-+.|++....|
T Consensus       246 ~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p  275 (429)
T KOG0595|consen  246 ELLISLLQRNPKDRISFEDFFDHPFLAANP  275 (429)
T ss_pred             hhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence            999999999999999999999999988765


No 163
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.94  E-value=1.1e-26  Score=232.66  Aligned_cols=160  Identities=29%  Similarity=0.430  Sum_probs=127.8

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC----------------------------C
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ----------------------------P   52 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~----------------------------~   52 (468)
                      +.||+.||+|||+.||+|+||||+||+++.++.++|+|||++.........                            .
T Consensus       109 ~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (316)
T cd05574         109 AAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFR  188 (316)
T ss_pred             HHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCC
Confidence            369999999999999999999999999999999999999998654322110                            1


Q ss_pred             ccccccCCcccChhhhcCCCCCCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccC
Q 012191           53 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLF  132 (468)
Q Consensus        53 ~~~~~gt~~Y~APE~l~g~~~~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~  132 (468)
                      ....+|+..|+|||++.+ ..++.++|||||||++|+|++|..||.+.+....+..+.......+               
T Consensus       189 ~~~~~g~~~y~aPE~~~~-~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~---------------  252 (316)
T cd05574         189 SNSFVGTEEYIAPEVISG-DGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFP---------------  252 (316)
T ss_pred             CCCCcCccCCcCHHHHcC-CCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCC---------------
Confidence            113367889999999976 4578899999999999999999999988877666655532110000               


Q ss_pred             CCCCCCCchhhhhcCCCcHHHHHHHHHhcCCCCCCCcC----HHHHHhcccccCCCCCCC
Q 012191          133 KPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRAT----ASAALASEYFSTKPYACD  188 (468)
Q Consensus       133 ~~~~~~~~~l~~~~~~~s~~l~dLL~~mL~~DP~kRpT----a~e~L~Hp~F~~~p~~~~  188 (468)
                                  ....++..+.+||.+||..||.+|||    +.++|.||||+...|+.-
T Consensus       253 ------------~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~~~~~  300 (316)
T cd05574         253 ------------GSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVNWALI  300 (316)
T ss_pred             ------------CccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCChhhc
Confidence                        01226889999999999999999999    999999999999777643


No 164
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.94  E-value=1.6e-26  Score=223.19  Aligned_cols=150  Identities=26%  Similarity=0.442  Sum_probs=122.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||++||+.||+|+||+|+||+++.++.++|+|||++....... .......+++.|+|||++.+ ..++.++||
T Consensus       108 ~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv  185 (257)
T cd08223         108 FVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC-DMASTLIGTPYYMSPELFSN-KPYNYKSDV  185 (257)
T ss_pred             HHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccC-CccccccCCcCccChhHhcC-CCCCchhhh
Confidence            3689999999999999999999999999999999999999987654322 22334567899999999876 457889999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|..||.+.+.......+....  .+                          .....++..+.+||.+|
T Consensus       186 ~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~--~~--------------------------~~~~~~~~~~~~li~~~  237 (257)
T cd08223         186 WALGCCVYEMATLKHAFNAKDMNSLVYRIIEGK--LP--------------------------PMPKDYSPELGELIATM  237 (257)
T ss_pred             HHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcC--CC--------------------------CCccccCHHHHHHHHHH
Confidence            999999999999999998776655544443211  10                          00124678899999999


Q ss_pred             cCCCCCCCcCHHHHHhcccc
Q 012191          161 LSVEPYKRATASAALASEYF  180 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F  180 (468)
                      |+.||.+|||+.++|.||||
T Consensus       238 l~~~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         238 LSKRPEKRPSVKSILRQPYI  257 (257)
T ss_pred             hccCcccCCCHHHHhcCCCC
Confidence            99999999999999999997


No 165
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.94  E-value=9.7e-27  Score=248.00  Aligned_cols=153  Identities=27%  Similarity=0.458  Sum_probs=126.8

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC-CCccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR-QPLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~-~~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +.||+.||.|||++||+||||||+|||++.++.+||+|||++..+..... ......+||+.|+|||++.+ ..++.++|
T Consensus       175 ~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~D  253 (478)
T PTZ00267        175 FYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWER-KRYSKKAD  253 (478)
T ss_pred             HHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCC-CCCCcHHh
Confidence            36999999999999999999999999999999999999999986643321 12334578999999999876 46899999


Q ss_pred             eeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           80 LWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        80 IWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      ||||||++|+|++|..||.+.+..+.+..+......+                            ....++..+.+||.+
T Consensus       254 v~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~----------------------------~~~~~s~~~~~li~~  305 (478)
T PTZ00267        254 MWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDP----------------------------FPCPVSSGMKALLDP  305 (478)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC----------------------------CCccCCHHHHHHHHH
Confidence            9999999999999999999887776666654321100                            012467889999999


Q ss_pred             hcCCCCCCCcCHHHHHhcccccC
Q 012191          160 LLSVEPYKRATASAALASEYFST  182 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~Hp~F~~  182 (468)
                      ||..||.+|||+.++|.|+|+..
T Consensus       306 ~L~~dP~~Rps~~~~l~~~~~~~  328 (478)
T PTZ00267        306 LLSKNPALRPTTQQLLHTEFLKY  328 (478)
T ss_pred             HhccChhhCcCHHHHHhCHHHHH
Confidence            99999999999999999999864


No 166
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.93  E-value=1.5e-26  Score=225.58  Aligned_cols=152  Identities=28%  Similarity=0.433  Sum_probs=119.1

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcC----CCCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLG----ATDYGP   76 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g----~~~~s~   76 (468)
                      +.||+.||.|||+++|+|+||+|+||+++.++.++|+|||++....... .......++..|+|||++.+    ...++.
T Consensus       117 ~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~  195 (272)
T cd06637         117 CREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDF  195 (272)
T ss_pred             HHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceeccccc-ccCCcccccccccCHhHhccccCcCCCCCc
Confidence            3699999999999999999999999999999999999999987553321 12234567899999999863    235788


Q ss_pred             CcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHH
Q 012191           77 SVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNL  156 (468)
Q Consensus        77 ~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dL  156 (468)
                      ++||||+||++|+|++|..||...........+...   +..                        ......++..+.+|
T Consensus       196 ~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~---~~~------------------------~~~~~~~~~~~~~l  248 (272)
T cd06637         196 KSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN---PAP------------------------RLKSKKWSKKFQSF  248 (272)
T ss_pred             hhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcC---CCC------------------------CCCCCCcCHHHHHH
Confidence            999999999999999999999765544333222110   000                        00112467889999


Q ss_pred             HHHhcCCCCCCCcCHHHHHhcccc
Q 012191          157 IETLLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       157 L~~mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      |.+||..||.+|||+.++|.||||
T Consensus       249 i~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         249 IESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             HHHHcCCChhhCCCHHHHhhCCCC
Confidence            999999999999999999999998


No 167
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.93  E-value=2.4e-26  Score=226.21  Aligned_cols=155  Identities=24%  Similarity=0.342  Sum_probs=123.7

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhc----CCCCCCCC
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLL----GATDYGPS   77 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~----g~~~~s~~   77 (468)
                      .||+.||.|||+.||+|+||||+|||++.++.++|+|||++....... .......++..|+|||++.    ....++.+
T Consensus       110 ~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~  188 (282)
T cd06643         110 KQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI-QRRDSFIGTPYWMAPEVVMCETSKDRPYDYK  188 (282)
T ss_pred             HHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEccccccccccccc-cccccccccccccCHhhccccCCCCCCCCcc
Confidence            689999999999999999999999999999999999999986543221 2223456789999999984    22457789


Q ss_pred             cceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHH
Q 012191           78 VDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLI  157 (468)
Q Consensus        78 sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL  157 (468)
                      +||||+||++|+|++|.+||...+..+....+........                          .....++..+.+||
T Consensus       189 ~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~li  242 (282)
T cd06643         189 ADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTL--------------------------AQPSRWSSEFKDFL  242 (282)
T ss_pred             chhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCC--------------------------CCccccCHHHHHHH
Confidence            9999999999999999999988776665555533211000                          00124678899999


Q ss_pred             HHhcCCCCCCCcCHHHHHhcccccCC
Q 012191          158 ETLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       158 ~~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      .+||+.||.+|||+.++|+||||...
T Consensus       243 ~~~l~~~p~~Rp~~~~il~~~~~~~~  268 (282)
T cd06643         243 KKCLEKNVDARWTTTQLLQHPFVTVN  268 (282)
T ss_pred             HHHccCChhhCcCHHHHhcCCCEecc
Confidence            99999999999999999999999863


No 168
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.93  E-value=1.2e-26  Score=254.95  Aligned_cols=168  Identities=32%  Similarity=0.454  Sum_probs=142.1

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhc----CCCCCCCC
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLL----GATDYGPS   77 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~----g~~~~s~~   77 (468)
                      -.|+.||.-||+.|+|||||||+|||||..|.|||+|||.+..+...+.......+|||-|++||+|.    +...|+..
T Consensus       182 aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~e  261 (1317)
T KOG0612|consen  182 AEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRE  261 (1317)
T ss_pred             HHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCc
Confidence            36889999999999999999999999999999999999999888766666667789999999999995    22568999


Q ss_pred             cceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHH--cCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHH
Q 012191           78 VDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKL--CGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVN  155 (468)
Q Consensus        78 sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~--~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~d  155 (468)
                      +|.||+||++||||.|..||....-++.+.+|+..  ...+|.+                           .++|+++++
T Consensus       262 cDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~---------------------------~~VSeeakd  314 (1317)
T KOG0612|consen  262 CDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDE---------------------------TDVSEEAKD  314 (1317)
T ss_pred             cchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcc---------------------------cccCHHHHH
Confidence            99999999999999999999999999999999865  2222211                           248999999


Q ss_pred             HHHHhcCCCCCCCcC---HHHHHhcccccCCCCCCCCCCCCCCCC
Q 012191          156 LIETLLSVEPYKRAT---ASAALASEYFSTKPYACDLSSLPIYPP  197 (468)
Q Consensus       156 LL~~mL~~DP~kRpT---a~e~L~Hp~F~~~p~~~~~~~~p~~~p  197 (468)
                      ||+++|. +|..|..   ++++-.||||...+|..--...|.+-|
T Consensus       315 LI~~ll~-~~e~RLgrngiedik~HpFF~g~~W~~iR~~~pP~vP  358 (1317)
T KOG0612|consen  315 LIEALLC-DREVRLGRNGIEDIKNHPFFEGIDWDNIRESVPPVVP  358 (1317)
T ss_pred             HHHHHhc-ChhhhcccccHHHHHhCccccCCChhhhhhcCCCCCC
Confidence            9999984 7889988   999999999999999554444444444


No 169
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.93  E-value=8.3e-27  Score=220.13  Aligned_cols=149  Identities=33%  Similarity=0.535  Sum_probs=132.2

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      ++|++.||.|||..+|+||||||+|+|++..+.+||+|||.+.....+   .-...+||.-|.|||...+ ..++..+|+
T Consensus       130 i~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~---kR~tlcgt~dyl~pEmv~~-~~hd~~Vd~  205 (281)
T KOG0580|consen  130 IKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSN---KRKTLCGTLDYLPPEMVEG-RGHDKFVDL  205 (281)
T ss_pred             HHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCCC---CceeeecccccCCHhhcCC-CCccchhhH
Confidence            579999999999999999999999999999999999999998755432   3356799999999999877 568999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |++|++.||++.|.+||...+..+.+.+|.+.--..|                             ..++..+.|||.+|
T Consensus       206 w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p-----------------------------~~is~~a~dlI~~l  256 (281)
T KOG0580|consen  206 WSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP-----------------------------STISGGAADLISRL  256 (281)
T ss_pred             HHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC-----------------------------cccChhHHHHHHHH
Confidence            9999999999999999999999999999977543322                             35789999999999


Q ss_pred             cCCCCCCCcCHHHHHhcccccC
Q 012191          161 LSVEPYKRATASAALASEYFST  182 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F~~  182 (468)
                      |..+|.+|.+..+++.|||...
T Consensus       257 l~~~p~~r~~l~~v~~hpwI~a  278 (281)
T KOG0580|consen  257 LVKNPIERLALTEVMDHPWIVA  278 (281)
T ss_pred             hccCccccccHHHHhhhHHHHh
Confidence            9999999999999999999864


No 170
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.93  E-value=2.3e-26  Score=225.98  Aligned_cols=152  Identities=27%  Similarity=0.449  Sum_probs=119.7

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcC----CCCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLG----ATDYGP   76 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g----~~~~s~   76 (468)
                      +.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++....... .......+++.|+|||.+..    ...++.
T Consensus       127 ~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~  205 (282)
T cd06636         127 CREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDY  205 (282)
T ss_pred             HHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhccc-cCCCcccccccccCHhhcCcccCcCcCCCc
Confidence            3689999999999999999999999999999999999999986543221 12234567899999998853    235788


Q ss_pred             CcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHH
Q 012191           77 SVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNL  156 (468)
Q Consensus        77 ~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dL  156 (468)
                      ++|||||||++|+|++|.+||...........+...   ...                        ......++..+.+|
T Consensus       206 ~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~---~~~------------------------~~~~~~~~~~~~~l  258 (282)
T cd06636         206 RSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRN---PPP------------------------KLKSKKWSKKFIDF  258 (282)
T ss_pred             ccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhC---CCC------------------------CCcccccCHHHHHH
Confidence            999999999999999999999766544433332111   000                        00113578899999


Q ss_pred             HHHhcCCCCCCCcCHHHHHhcccc
Q 012191          157 IETLLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       157 L~~mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      |.+||..||.+|||+.++|.||||
T Consensus       259 i~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         259 IEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             HHHHhCCChhhCcCHHHHhcCCCC
Confidence            999999999999999999999997


No 171
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.93  E-value=3e-26  Score=219.83  Aligned_cols=153  Identities=26%  Similarity=0.426  Sum_probs=126.4

Q ss_pred             HHHHHHHHHHhC-CCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcC--CCCCCCCcc
Q 012191            3 QLLHGLEHCHSR-GVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLG--ATDYGPSVD   79 (468)
Q Consensus         3 QLL~gL~yLHs~-gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g--~~~~s~~sD   79 (468)
                      -++.||.||-++ ||+|||+||+|||+|..|++||||||.+-++....  ..+...|.+.|||||.+.-  ...|+..+|
T Consensus       199 a~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk--AhtrsAGC~~YMaPERidp~~~~kYDiRaD  276 (391)
T KOG0983|consen  199 AIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK--AHTRSAGCAAYMAPERIDPPDKPKYDIRAD  276 (391)
T ss_pred             HHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeeccc--ccccccCCccccCccccCCCCCCccchhhh
Confidence            478899999874 89999999999999999999999999997765442  2344578899999999853  346899999


Q ss_pred             eeeeehhhhhhhhcCCCCCCC-chHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           80 LWSVGCVFAELLIGKPILQGR-TEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        80 IWSLG~ILyeLltG~~pf~g~-~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |||||+.|+||.||+.||.+. ++.+.+.++...  .||.                       |... ..+++.+.+|+.
T Consensus       277 VWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~--ePP~-----------------------L~~~-~gFSp~F~~fv~  330 (391)
T KOG0983|consen  277 VWSLGITLVELATGQYPYKGCKTDFEVLTKVLNE--EPPL-----------------------LPGH-MGFSPDFQSFVK  330 (391)
T ss_pred             hhhhccchhhhhcccCCCCCCCccHHHHHHHHhc--CCCC-----------------------CCcc-cCcCHHHHHHHH
Confidence            999999999999999999884 677888888652  2211                       1111 238999999999


Q ss_pred             HhcCCCCCCCcCHHHHHhcccccCC
Q 012191          159 TLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      .||..|+.+||.-.++|+|||+...
T Consensus       331 ~CL~kd~r~RP~Y~~Ll~h~Fi~~y  355 (391)
T KOG0983|consen  331 DCLTKDHRKRPKYNKLLEHPFIKRY  355 (391)
T ss_pred             HHhhcCcccCcchHHHhcCcceeec
Confidence            9999999999999999999998764


No 172
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.93  E-value=2.8e-26  Score=228.10  Aligned_cols=157  Identities=26%  Similarity=0.452  Sum_probs=125.5

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+|+||||+||+++.++.++|+|||++....... .......++..|+|||.+.+ ..++.++||
T Consensus       124 ~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv  201 (292)
T cd06658         124 CLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV-PKRKSLVGTPYWMAPEVISR-LPYGTEVDI  201 (292)
T ss_pred             HHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhccccc-ccCceeecCccccCHHHHcc-CCCCchhhH
Confidence            3689999999999999999999999999999999999999986543321 22234567899999999865 457889999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|..||.+......+..+........                          .....++..+.+||.+|
T Consensus       202 ~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~li~~~  255 (292)
T cd06658         202 WSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRV--------------------------KDSHKVSSVLRGFLDLM  255 (292)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCcc--------------------------ccccccCHHHHHHHHHH
Confidence            9999999999999999988776555544432111000                          00124678899999999


Q ss_pred             cCCCCCCCcCHHHHHhcccccCCCC
Q 012191          161 LSVEPYKRATASAALASEYFSTKPY  185 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F~~~p~  185 (468)
                      |..||.+|||+.++|+||||...+.
T Consensus       256 l~~~P~~Rpt~~~il~~~~~~~~~~  280 (292)
T cd06658         256 LVREPSQRATAQELLQHPFLKLAGP  280 (292)
T ss_pred             ccCChhHCcCHHHHhhChhhhccCC
Confidence            9999999999999999999997544


No 173
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.93  E-value=2e-26  Score=227.53  Aligned_cols=154  Identities=27%  Similarity=0.422  Sum_probs=121.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||+|||+.||+|+||||+|||++.++.++|+|||++......   ......++..|+|||.+.+...++.++||
T Consensus       103 ~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di  179 (279)
T cd05633         103 ATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---KPHASVGTHGYMAPEVLQKGTAYDSSADW  179 (279)
T ss_pred             HHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceecccc---CccCcCCCcCccCHHHhcCCCCCCchhhh
Confidence            368999999999999999999999999999999999999998654432   12234689999999998654568899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchH--HHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEV--EQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~--e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      ||+||++|+|++|..||.+....  ..+.....   ...                         ......++.++.+||.
T Consensus       180 ~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~---~~~-------------------------~~~~~~~~~~~~~li~  231 (279)
T cd05633         180 FSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL---TVN-------------------------VELPDSFSPELKSLLE  231 (279)
T ss_pred             HHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhh---cCC-------------------------cCCccccCHHHHHHHH
Confidence            99999999999999999754321  11111110   000                         0112357889999999


Q ss_pred             HhcCCCCCCCc-----CHHHHHhcccccCCCC
Q 012191          159 TLLSVEPYKRA-----TASAALASEYFSTKPY  185 (468)
Q Consensus       159 ~mL~~DP~kRp-----Ta~e~L~Hp~F~~~p~  185 (468)
                      +||..||.+|+     |+.++++||||....+
T Consensus       232 ~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~~  263 (279)
T cd05633         232 GLLQRDVSKRLGCLGRGAQEVKEHVFFKGIDW  263 (279)
T ss_pred             HHhcCCHHHhcCCCCCCHHHHHhCccccCCCH
Confidence            99999999999     6999999999988654


No 174
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.93  E-value=1.6e-26  Score=225.53  Aligned_cols=163  Identities=25%  Similarity=0.406  Sum_probs=128.5

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCC---cEEEEecCCccccC------CCCCCCccccccCCcccChhhhc--
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEG---VLKLADFGLANFSN------TGHRQPLTSRVVTLWYRPPELLL--   69 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g---~vKL~DFGla~~~~------~~~~~~~~~~~gt~~Y~APE~l~--   69 (468)
                      ++.|+.||.|||.+||.||||||+|||.....   -||||||.+..-..      +.....+...+|+..|||||+..  
T Consensus       182 vkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~f  261 (463)
T KOG0607|consen  182 VKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVF  261 (463)
T ss_pred             HHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhh
Confidence            36799999999999999999999999986554   38999998874322      12223345668899999999863  


Q ss_pred             --CCCCCCCCcceeeeehhhhhhhhcCCCCCCCc---------------hHHHHHHHHHHcCCCCchhhhccCCCccccC
Q 012191           70 --GATDYGPSVDLWSVGCVFAELLIGKPILQGRT---------------EVEQLHKIFKLCGSPPDDYWKKSKLPHATLF  132 (468)
Q Consensus        70 --g~~~~s~~sDIWSLG~ILyeLltG~~pf~g~~---------------~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~  132 (468)
                        ....|+..+|+||||||||.||+|++||.|.-               ....++.|.+.....|+..|           
T Consensus       262 v~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdW-----------  330 (463)
T KOG0607|consen  262 VDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDW-----------  330 (463)
T ss_pred             ccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhh-----------
Confidence              34578999999999999999999999998742               13344555554444444444           


Q ss_pred             CCCCCCCchhhhhcCCCcHHHHHHHHHhcCCCCCCCcCHHHHHhcccccCCCCCCC
Q 012191          133 KPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPYACD  188 (468)
Q Consensus       133 ~~~~~~~~~l~~~~~~~s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~p~~~~  188 (468)
                                    ..++.++++||..+|..|+..|.+|.++|+|||++.....+.
T Consensus       331 --------------ahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~eka  372 (463)
T KOG0607|consen  331 --------------AHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPEKA  372 (463)
T ss_pred             --------------HHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchhcc
Confidence                          689999999999999999999999999999999988654443


No 175
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93  E-value=2.2e-26  Score=241.84  Aligned_cols=155  Identities=32%  Similarity=0.585  Sum_probs=122.2

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECC-CCcEEEEecCCccccCCCCCCCccccccCCcccChhhhc-CCCCCCCCcc
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNN-EGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLL-GATDYGPSVD   79 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~-~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~-g~~~~s~~sD   79 (468)
                      +|||+||.|||++.|||||||.+|+||+. .|.+||+|||.++....- ........||+.|||||++- |...|+.++|
T Consensus       682 kQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi-nP~TETFTGTLQYMAPEvIDqG~RGYG~aAD  760 (1226)
T KOG4279|consen  682 KQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI-NPCTETFTGTLQYMAPEVIDQGPRGYGKAAD  760 (1226)
T ss_pred             HHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccC-CccccccccchhhhChHhhccCCcCCCchhh
Confidence            79999999999999999999999999964 689999999998766432 12233567899999999994 5567999999


Q ss_pred             eeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           80 LWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        80 IWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      ||||||++.||.||+|||..-....  ..+|+.                 .+|+-..++.       ..++.+++.||.+
T Consensus       761 IWS~GCT~vEMATGrPPF~Elgspq--AAMFkV-----------------GmyKvHP~iP-------eelsaeak~Filr  814 (1226)
T KOG4279|consen  761 IWSFGCTMVEMATGRPPFVELGSPQ--AAMFKV-----------------GMYKVHPPIP-------EELSAEAKNFILR  814 (1226)
T ss_pred             hhhccceeEeeccCCCCeeecCChh--Hhhhhh-----------------cceecCCCCc-------HHHHHHHHHHHHH
Confidence            9999999999999999996432211  111111                 1122111221       3578899999999


Q ss_pred             hcCCCCCCCcCHHHHHhcccccCC
Q 012191          160 LLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      |+.+||.+||+|.++|.+||++..
T Consensus       815 cFepd~~~R~sA~~LL~DpFlq~~  838 (1226)
T KOG4279|consen  815 CFEPDPCDRPSAKDLLQDPFLQHN  838 (1226)
T ss_pred             HcCCCcccCccHHHhccCcccccC
Confidence            999999999999999999999865


No 176
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 
Probab=99.93  E-value=3.5e-26  Score=221.51  Aligned_cols=157  Identities=29%  Similarity=0.464  Sum_probs=124.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC---CccccccCCcccChhhhcCCCCCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ---PLTSRVVTLWYRPPELLLGATDYGPS   77 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~---~~~~~~gt~~Y~APE~l~g~~~~s~~   77 (468)
                      +.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++.........   ......++..|+|||.+.....++.+
T Consensus       108 ~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~  187 (267)
T cd06610         108 LKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFK  187 (267)
T ss_pred             HHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcc
Confidence            469999999999999999999999999999999999999998765543222   12334678899999998765468899


Q ss_pred             cceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHH
Q 012191           78 VDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLI  157 (468)
Q Consensus        78 sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL  157 (468)
                      +|+|||||++|+|++|..||...+....+..+...   .+..+                ..    ...+..++..+.+||
T Consensus       188 ~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~----------------~~----~~~~~~~~~~~~~li  244 (267)
T cd06610         188 ADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQN---DPPSL----------------ET----GADYKKYSKSFRKMI  244 (267)
T ss_pred             cchHhHhHHHHHHHhCCCCccccChhhhHHHHhcC---CCCCc----------------CC----ccccccccHHHHHHH
Confidence            99999999999999999999877665544444321   11000                00    001346788999999


Q ss_pred             HHhcCCCCCCCcCHHHHHhcccc
Q 012191          158 ETLLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       158 ~~mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      .+||..||.+|||+.++|.||||
T Consensus       245 ~~~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         245 SLCLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             HHHcCCChhhCcCHHHHhhCCCC
Confidence            99999999999999999999998


No 177
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.93  E-value=5.4e-26  Score=233.26  Aligned_cols=147  Identities=31%  Similarity=0.472  Sum_probs=122.2

Q ss_pred             HHHHHHHHHHHhCC-CeeccCCCCceEECCCC-cEEEEecCCccccCCCCCCCccccccCCcccChhhhcC-CCCCCCCc
Q 012191            2 NQLLHGLEHCHSRG-VLHRDIKGSNLLVNNEG-VLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLG-ATDYGPSV   78 (468)
Q Consensus         2 ~QLL~gL~yLHs~g-IvHrDIKp~NILld~~g-~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g-~~~~s~~s   78 (468)
                      .||+.||.|||+++ |||||||++|||++.++ ++||+|||+++...... ...+...||+.|||||++.+ ...|+.++
T Consensus       149 ldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~-~~~~~~~GT~~wMAPEv~~~~~~~~~~K~  227 (362)
T KOG0192|consen  149 LDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK-TSMTSVAGTYRWMAPEVLRGEKSPYTEKS  227 (362)
T ss_pred             HHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc-ccccCCCCCccccChhhhcCCCCcCCccc
Confidence            58999999999999 99999999999999997 99999999997665432 34455789999999999985 35799999


Q ss_pred             ceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           79 DLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        79 DIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      ||||||++||||++|..||.+.........+......|..                           ...+++.+..||.
T Consensus       228 DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~---------------------------p~~~~~~l~~l~~  280 (362)
T KOG0192|consen  228 DVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPI---------------------------PKECPPHLSSLME  280 (362)
T ss_pred             hhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCC---------------------------CccCCHHHHHHHH
Confidence            9999999999999999999998885555444332222211                           1237889999999


Q ss_pred             HhcCCCCCCCcCHHHHHh
Q 012191          159 TLLSVEPYKRATASAALA  176 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~  176 (468)
                      .||..||..||+..+++.
T Consensus       281 ~CW~~dp~~RP~f~ei~~  298 (362)
T KOG0192|consen  281 RCWLVDPSRRPSFLEIVS  298 (362)
T ss_pred             HhCCCCCCcCCCHHHHHH
Confidence            999999999999999875


No 178
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.93  E-value=2.4e-26  Score=236.66  Aligned_cols=152  Identities=29%  Similarity=0.440  Sum_probs=136.0

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      |.||+.||.|||++.|+|||||+.|||++.++.|+|+|||+|+...+.. ......+||+.|+.||++.+ .+|+.++||
T Consensus       112 ~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~-~~a~tvvGTp~YmcPEil~d-~pYn~KSDi  189 (426)
T KOG0589|consen  112 FVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED-SLASTVVGTPYYMCPEILSD-IPYNEKSDI  189 (426)
T ss_pred             HHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCch-hhhheecCCCcccCHHHhCC-CCCCccCcc
Confidence            4699999999999999999999999999999999999999999887643 24567799999999999987 679999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|||++-+++|.+.+......+|+.....|-.                            ..++.+++.||..|
T Consensus       190 WsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp----------------------------~~ys~el~~lv~~~  241 (426)
T KOG0589|consen  190 WSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLP----------------------------SMYSSELRSLVKSM  241 (426)
T ss_pred             hhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCC----------------------------ccccHHHHHHHHHH
Confidence            99999999999999999999999999999887644432                            35788999999999


Q ss_pred             cCCCCCCCcCHHHHHhcccccC
Q 012191          161 LSVEPYKRATASAALASEYFST  182 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F~~  182 (468)
                      |..+|..||++.++|.+|....
T Consensus       242 l~~~P~~RPsa~~LL~~P~l~~  263 (426)
T KOG0589|consen  242 LRKNPEHRPSALELLRRPHLLR  263 (426)
T ss_pred             hhcCCccCCCHHHHhhChhhhh
Confidence            9999999999999999987763


No 179
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.93  E-value=2.1e-26  Score=230.32  Aligned_cols=149  Identities=30%  Similarity=0.504  Sum_probs=131.7

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      |+||+.|+.|||.++|+|||||.+|||+|.++.+||+|||++..+...  ..++.+||++-|.+||++.|..+-++.+|.
T Consensus       159 FRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~--kfLqTFCGSPLYASPEIvNG~PY~GPEVDs  236 (668)
T KOG0611|consen  159 FRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADK--KFLQTFCGSPLYASPEIVNGTPYKGPEVDS  236 (668)
T ss_pred             HHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccc--cHHHHhcCCcccCCccccCCCCCCCCccch
Confidence            589999999999999999999999999999999999999999988654  467888999999999999997767899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||||++||.|+.|..||.|.+....+.+|......-                              +.-+.++.-||++|
T Consensus       237 WsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrE------------------------------P~~PSdA~gLIRwm  286 (668)
T KOG0611|consen  237 WSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYRE------------------------------PETPSDASGLIRWM  286 (668)
T ss_pred             hhHHHHHHHHhhcccccCCchHHHHHHHhhcccccC------------------------------CCCCchHHHHHHHH
Confidence            999999999999999999999888888875432111                              23466788999999


Q ss_pred             cCCCCCCCcCHHHHHhccccc
Q 012191          161 LSVEPYKRATASAALASEYFS  181 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F~  181 (468)
                      |.+||.+|.|+.++..|=|.+
T Consensus       287 LmVNP~RRATieDiAsHWWvN  307 (668)
T KOG0611|consen  287 LMVNPERRATIEDIASHWWVN  307 (668)
T ss_pred             HhcCcccchhHHHHhhhheee
Confidence            999999999999999996654


No 180
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.93  E-value=3.8e-26  Score=225.16  Aligned_cols=157  Identities=22%  Similarity=0.326  Sum_probs=120.5

Q ss_pred             HHHHHHHHHHHhC-CCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCC--CCCCCCc
Q 012191            2 NQLLHGLEHCHSR-GVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGA--TDYGPSV   78 (468)
Q Consensus         2 ~QLL~gL~yLHs~-gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~--~~~s~~s   78 (468)
                      .|++.||+|||+. ||+||||||+|||++.++.++|+|||++.......  ......++..|+|||++.+.  ..++.++
T Consensus       114 ~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~  191 (288)
T cd06616         114 VATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI--AKTRDAGCRPYMAPERIDPSARDGYDVRS  191 (288)
T ss_pred             HHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC--ccccccCccCccCHHHhccccccCCcchh
Confidence            6899999999975 99999999999999999999999999987554321  22334678899999998764  3688999


Q ss_pred             ceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           79 DLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        79 DIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      ||||+||++|+|++|.+||.....  ....+.......+...                  .   ......++.++.+||.
T Consensus       192 Di~slG~il~el~~g~~p~~~~~~--~~~~~~~~~~~~~~~~------------------~---~~~~~~~~~~l~~li~  248 (288)
T cd06616         192 DVWSLGITLYEVATGKFPYPKWNS--VFDQLTQVVKGDPPIL------------------S---NSEEREFSPSFVNFIN  248 (288)
T ss_pred             hhhHHHHHHHHHHhCCCCchhcch--HHHHHhhhcCCCCCcC------------------C---CcCCCccCHHHHHHHH
Confidence            999999999999999999976542  2222222211111000                  0   0011347889999999


Q ss_pred             HhcCCCCCCCcCHHHHHhcccccCC
Q 012191          159 TLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      +||+.||.+|||+.+++.||||...
T Consensus       249 ~~l~~~p~~Rpt~~~i~~~~~~~~~  273 (288)
T cd06616         249 LCLIKDESKRPKYKELLEHPFIKDY  273 (288)
T ss_pred             HHccCChhhCcCHHHHhcChhhhch
Confidence            9999999999999999999999863


No 181
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.93  E-value=6.5e-26  Score=220.54  Aligned_cols=151  Identities=32%  Similarity=0.615  Sum_probs=120.6

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC-----CCccccccCCcccChhhhcCCCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR-----QPLTSRVVTLWYRPPELLLGATDYG   75 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~-----~~~~~~~gt~~Y~APE~l~g~~~~s   75 (468)
                      +.||+.||+|||+.|++|+||+|+||+++.++.++|+|||++........     .......++..|+|||.+.+ ..++
T Consensus       112 ~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~-~~~~  190 (267)
T cd06628         112 VRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQ-TSYT  190 (267)
T ss_pred             HHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhcc-CCCC
Confidence            36899999999999999999999999999999999999999876542211     01112357888999999876 4578


Q ss_pred             CCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHH
Q 012191           76 PSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVN  155 (468)
Q Consensus        76 ~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~d  155 (468)
                      .++|+|||||++|+|++|..||.+.+....+..+....  .+                          .....++..+.+
T Consensus       191 ~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~~--------------------------~~~~~~~~~~~~  242 (267)
T cd06628         191 RKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENA--SP--------------------------EIPSNISSEAID  242 (267)
T ss_pred             chhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccC--CC--------------------------cCCcccCHHHHH
Confidence            89999999999999999999998776555444432210  00                          011346788999


Q ss_pred             HHHHhcCCCCCCCcCHHHHHhcccc
Q 012191          156 LIETLLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       156 LL~~mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      ||.+||+.||.+||++.++|+||||
T Consensus       243 li~~~l~~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         243 FLEKTFEIDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             HHHHHccCCchhCcCHHHHhhCCCC
Confidence            9999999999999999999999998


No 182
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.93  E-value=7.4e-26  Score=224.04  Aligned_cols=157  Identities=28%  Similarity=0.421  Sum_probs=122.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcC----CCCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLG----ATDYGP   76 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g----~~~~s~   76 (468)
                      +.||+.||.|||+.||+|+||||+||+++.++.++|+|||++...... ........+++.|+|||++.+    ...++.
T Consensus       116 ~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~  194 (292)
T cd06644         116 CRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT-LQRRDSFIGTPYWMAPEVVMCETMKDTPYDY  194 (292)
T ss_pred             HHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccc-ccccceecCCccccCceeeccccccCCCCCc
Confidence            368999999999999999999999999999999999999988654322 122234467889999999853    234678


Q ss_pred             CcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHH
Q 012191           77 SVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNL  156 (468)
Q Consensus        77 ~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dL  156 (468)
                      ++|||||||++|+|++|.+||...+....+.++...  .++.                        ......++.++.+|
T Consensus       195 ~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~--~~~~------------------------~~~~~~~~~~~~~l  248 (292)
T cd06644         195 KADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS--EPPT------------------------LSQPSKWSMEFRDF  248 (292)
T ss_pred             hhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcC--CCcc------------------------CCCCcccCHHHHHH
Confidence            999999999999999999999876655444443221  0000                        00113467789999


Q ss_pred             HHHhcCCCCCCCcCHHHHHhcccccCCC
Q 012191          157 IETLLSVEPYKRATASAALASEYFSTKP  184 (468)
Q Consensus       157 L~~mL~~DP~kRpTa~e~L~Hp~F~~~p  184 (468)
                      |.+||..||.+||++.++|+||||....
T Consensus       249 i~~~l~~~p~~Rp~~~~il~~~~~~~~~  276 (292)
T cd06644         249 LKTALDKHPETRPSAAQLLEHPFVSSVT  276 (292)
T ss_pred             HHHHhcCCcccCcCHHHHhcCccccccc
Confidence            9999999999999999999999997643


No 183
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.93  E-value=6.4e-26  Score=223.57  Aligned_cols=157  Identities=26%  Similarity=0.408  Sum_probs=122.6

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.+|+|+||||+||+++.++.++|+|||++..+...   ......++..|+|||++.+...++.++||
T Consensus       103 ~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di  179 (278)
T cd05606         103 AAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---KPHASVGTHGYMAPEVLQKGVAYDSSADW  179 (278)
T ss_pred             HHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc---CCcCcCCCcCCcCcHHhcCCCCCCcccch
Confidence            368999999999999999999999999999999999999998755432   12334789999999999765568899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||+||++|+|++|..||.+........ +........                         ......++..+.+||.+|
T Consensus       180 ~s~G~~l~~l~~g~~p~~~~~~~~~~~-~~~~~~~~~-------------------------~~~~~~~s~~~~~li~~~  233 (278)
T cd05606         180 FSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLTMA-------------------------VELPDSFSPELRSLLEGL  233 (278)
T ss_pred             HhHHHHHHHHHhCCCCCCCCCccchHH-HHHHhhccC-------------------------CCCCCcCCHHHHHHHHHH
Confidence            999999999999999997653211111 000000000                         001124678999999999


Q ss_pred             cCCCCCCCc-----CHHHHHhcccccCCCCC
Q 012191          161 LSVEPYKRA-----TASAALASEYFSTKPYA  186 (468)
Q Consensus       161 L~~DP~kRp-----Ta~e~L~Hp~F~~~p~~  186 (468)
                      |..||.+|+     ++.++++||||....|.
T Consensus       234 l~~~p~~R~~~~~~~~~~ll~~~~~~~~~~~  264 (278)
T cd05606         234 LQRDVNRRLGCLGRGAQEVKEHPFFRSLDWQ  264 (278)
T ss_pred             hhcCHHhccCCCCCCHHHHHhCccccCCCch
Confidence            999999999     99999999999886553


No 184
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.93  E-value=7.3e-26  Score=226.11  Aligned_cols=179  Identities=24%  Similarity=0.342  Sum_probs=122.8

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC------CCccccccCCcccChhhhcCC-CC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR------QPLTSRVVTLWYRPPELLLGA-TD   73 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~------~~~~~~~gt~~Y~APE~l~g~-~~   73 (468)
                      ++||+.||.|||++||+|+||||+|||++.++.++|+|||.+........      .......++..|+|||++.+. ..
T Consensus       107 ~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  186 (314)
T cd08216         107 LKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQG  186 (314)
T ss_pred             HHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCC
Confidence            47999999999999999999999999999999999999998864432111      111234567889999998653 35


Q ss_pred             CCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccc---------cCCCCCCCCchhhh
Q 012191           74 YGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHAT---------LFKPQQPYDSSLRE  144 (468)
Q Consensus        74 ~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~---------~~~~~~~~~~~l~~  144 (468)
                      |+.++||||+||++|+|++|..||........+.....  +..+.. +.....+...         ...+... ......
T Consensus       187 ~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  262 (314)
T cd08216         187 YNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVR--GTVPCL-LDKSTYPLYEDSMSQSRSSNEHPNNR-DSVDHP  262 (314)
T ss_pred             CCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--ccCccc-cccCchhhhcCCcCcccccccccchh-hhhhcc
Confidence            78899999999999999999999987655443322221  211110 0000000000         0000000 000011


Q ss_pred             hcCCCcHHHHHHHHHhcCCCCCCCcCHHHHHhcccccCC
Q 012191          145 TFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       145 ~~~~~s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      ....++.++.+||..||.+||.+|||+.++|.||||+..
T Consensus       263 ~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~  301 (314)
T cd08216         263 YTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQC  301 (314)
T ss_pred             hhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhh
Confidence            112456789999999999999999999999999999853


No 185
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.93  E-value=6.6e-26  Score=229.57  Aligned_cols=179  Identities=40%  Similarity=0.691  Sum_probs=140.8

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.||+|+||+|.|||++.++.++|+|||++.....    ......++..|+|||.+.+...++.++||
T Consensus       114 ~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv  189 (328)
T cd07856         114 LYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDP----QMTGYVSTRYYRAPEIMLTWQKYDVEVDI  189 (328)
T ss_pred             HHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCC----CcCCCcccccccCceeeeccCCcCcHHHH
Confidence            36899999999999999999999999999999999999999875432    22344678899999988765668899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCC--CCCchhhhhcCCCcHHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQ--PYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |||||++|+|++|.+||.+.........+.+.++.++.+++..........+....  .........++.++..+.++|.
T Consensus       190 ~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  269 (328)
T cd07856         190 WSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLE  269 (328)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHH
Confidence            99999999999999999998888888888888888887665432111110000000  0011223445678899999999


Q ss_pred             HhcCCCCCCCcCHHHHHhcccccCC
Q 012191          159 TLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      +||+.||.+|||+.++|.||||...
T Consensus       270 ~~l~~~P~~R~t~~ell~~~~~~~~  294 (328)
T cd07856         270 KMLVFDPQKRISAAEALAHPYLAPY  294 (328)
T ss_pred             HHcCCChhhCCCHHHHhcCCccccc
Confidence            9999999999999999999999764


No 186
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.93  E-value=7e-26  Score=229.27  Aligned_cols=147  Identities=25%  Similarity=0.373  Sum_probs=113.8

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC-CccccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.||+|||++||+||||||+|||++.++.+||+|||++......... ......+++.|+|||++.+ ..++.++||
T Consensus       181 ~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDi  259 (338)
T cd05102         181 FQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESIFD-KVYTTQSDV  259 (338)
T ss_pred             HHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHhhc-CCCCcccCH
Confidence            59999999999999999999999999999999999999999754322111 1122345678999999876 458999999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||+||||++ |.+||.+....+.+...+.. +...                          .....+++.+.+||.+
T Consensus       260 wslG~il~el~~~g~~pf~~~~~~~~~~~~~~~-~~~~--------------------------~~~~~~~~~l~~li~~  312 (338)
T cd05102         260 WSFGVLLWEIFSLGASPYPGVQINEEFCQRLKD-GTRM--------------------------RAPENATPEIYRIMLA  312 (338)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhc-CCCC--------------------------CCCCCCCHHHHHHHHH
Confidence            999999999997 99999876544433332221 1100                          0012467889999999


Q ss_pred             hcCCCCCCCcCHHHHHh
Q 012191          160 LLSVEPYKRATASAALA  176 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~  176 (468)
                      ||..||.+|||+.++++
T Consensus       313 cl~~dp~~RPs~~el~~  329 (338)
T cd05102         313 CWQGDPKERPTFSALVE  329 (338)
T ss_pred             HccCChhhCcCHHHHHH
Confidence            99999999999999985


No 187
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.93  E-value=1e-25  Score=217.23  Aligned_cols=150  Identities=27%  Similarity=0.408  Sum_probs=122.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++....... .......+++.|+|||++.+ ..++.++|+
T Consensus       107 ~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di  184 (256)
T cd08529         107 FIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT-NFANTIVGTPYYLSPELCED-KPYNEKSDV  184 (256)
T ss_pred             HHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCcc-chhhccccCccccCHHHhcC-CCCCCccch
Confidence            3689999999999999999999999999999999999999987655432 12234467889999999876 457899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|..||...+.......+....  .+                          .....++..+.++|.+|
T Consensus       185 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~~--------------------------~~~~~~~~~~~~~i~~~  236 (256)
T cd08529         185 WALGVVLYECCTGKHPFDANNQGALILKIIRGV--FP--------------------------PVSQMYSQQLAQLIDQC  236 (256)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC--CC--------------------------CCccccCHHHHHHHHHH
Confidence            999999999999999998877665555543211  10                          00114678899999999


Q ss_pred             cCCCCCCCcCHHHHHhcccc
Q 012191          161 LSVEPYKRATASAALASEYF  180 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F  180 (468)
                      |+.+|.+||++.++|.|||+
T Consensus       237 l~~~p~~Rp~~~~ll~~~~~  256 (256)
T cd08529         237 LTKDYRQRPDTFQLLRNPSL  256 (256)
T ss_pred             ccCCcccCcCHHHHhhCCCC
Confidence            99999999999999999985


No 188
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.93  E-value=6.7e-26  Score=228.78  Aligned_cols=180  Identities=23%  Similarity=0.317  Sum_probs=120.7

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC-C-----CccccccCCcccChhhhcCC-CC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR-Q-----PLTSRVVTLWYRPPELLLGA-TD   73 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~-~-----~~~~~~gt~~Y~APE~l~g~-~~   73 (468)
                      +.||+.||.|||++||+||||||+|||++.++.++++||+.+........ .     ......++..|+|||++.+. ..
T Consensus       107 ~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  186 (327)
T cd08227         107 LQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQG  186 (327)
T ss_pred             HHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccccccccccccccceecccChHHhhcccCC
Confidence            36899999999999999999999999999999999999986543221100 0     01123457789999998753 35


Q ss_pred             CCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCc----------hhhhcc-C------CCccccCC-CC
Q 012191           74 YGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPD----------DYWKKS-K------LPHATLFK-PQ  135 (468)
Q Consensus        74 ~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~----------~~~~~~-~------~~~~~~~~-~~  135 (468)
                      |+.++|||||||++|+|++|..||..............  +..+.          +..... .      ........ ..
T Consensus       187 ~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (327)
T cd08227         187 YDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLN--GTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPR  264 (327)
T ss_pred             CCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhc--CCccccccccchhhhhcccCCcccCCcCCCCcccccCCcC
Confidence            88999999999999999999999986554433332221  11110          000000 0      00000000 00


Q ss_pred             C-CCCchhhhhcCCCcHHHHHHHHHhcCCCCCCCcCHHHHHhcccccC
Q 012191          136 Q-PYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST  182 (468)
Q Consensus       136 ~-~~~~~l~~~~~~~s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~  182 (468)
                      . ............+++.+.+||.+||++||.+|||+.++|+||||..
T Consensus       265 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~  312 (327)
T cd08227         265 PSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ  312 (327)
T ss_pred             ccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhh
Confidence            0 0000111222356788999999999999999999999999999976


No 189
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.93  E-value=7.6e-26  Score=219.48  Aligned_cols=153  Identities=34%  Similarity=0.516  Sum_probs=123.2

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++.....     .....++..|++||.+.+. .++.++||
T Consensus       103 ~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-----~~~~~~~~~y~~pe~~~~~-~~~~~~Dv  176 (260)
T cd05611         103 IAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-----NKKFVGTPDYLAPETILGV-GDDKMSDW  176 (260)
T ss_pred             HHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc-----cccCCCCcCccChhhhcCC-CCcchhhh
Confidence            36999999999999999999999999999999999999998865432     1234578889999998774 47899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|.+||.+.+....+..+.......+                         ......++..+.++|.+|
T Consensus       177 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~i~~~  231 (260)
T cd05611         177 WSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWP-------------------------EEVKEFCSPEAVDLINRL  231 (260)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCC-------------------------CcccccCCHHHHHHHHHH
Confidence            9999999999999999988777665555432111100                         011125788999999999


Q ss_pred             cCCCCCCCcC---HHHHHhcccccCCC
Q 012191          161 LSVEPYKRAT---ASAALASEYFSTKP  184 (468)
Q Consensus       161 L~~DP~kRpT---a~e~L~Hp~F~~~p  184 (468)
                      |+.||.+|||   +.|+|.||||....
T Consensus       232 l~~~p~~R~~~~~~~~~l~~~~~~~~~  258 (260)
T cd05611         232 LCMDPAKRLGANGYQEIKSHPFFKSIN  258 (260)
T ss_pred             ccCCHHHccCCCcHHHHHcChHhhcCC
Confidence            9999999995   57999999998743


No 190
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.93  E-value=6.2e-26  Score=225.86  Aligned_cols=155  Identities=28%  Similarity=0.498  Sum_probs=123.0

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.||+|+||||+|||++.++.++|+|||++....... .......+++.|+|||.+.+ ..++.++||
T Consensus       122 ~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv  199 (296)
T cd06654         122 CRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKRSTMVGTPYWMAPEVVTR-KAYGPKVDI  199 (296)
T ss_pred             HHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccc-cccCcccCCccccCHHHHcC-CCCCccchH
Confidence            3689999999999999999999999999999999999999987544321 12233467889999999876 457899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|.+||........+..+... +.+..                         .....++..+.+||.+|
T Consensus       200 ~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~-------------------------~~~~~~~~~l~~li~~~  253 (296)
T cd06654         200 WSLGIMAIEMIEGEPPYLNENPLRALYLIATN-GTPEL-------------------------QNPEKLSAIFRDFLNRC  253 (296)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcC-CCCCC-------------------------CCccccCHHHHHHHHHH
Confidence            99999999999999999877654443332211 11100                         00134678899999999


Q ss_pred             cCCCCCCCcCHHHHHhcccccCC
Q 012191          161 LSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      |..||.+|||+.++|.||||...
T Consensus       254 l~~~p~~Rpt~~eil~~~~~~~~  276 (296)
T cd06654         254 LDMDVEKRGSAKELLQHQFLKIA  276 (296)
T ss_pred             CcCCcccCcCHHHHhhChhhhcc
Confidence            99999999999999999999864


No 191
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.93  E-value=8.5e-26  Score=220.38  Aligned_cols=152  Identities=30%  Similarity=0.505  Sum_probs=117.6

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCC--CCCccccccCCcccChhhhcCCCCCCCCc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH--RQPLTSRVVTLWYRPPELLLGATDYGPSV   78 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~--~~~~~~~~gt~~Y~APE~l~g~~~~s~~s   78 (468)
                      +.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++.......  ........++..|+|||.+.+ ..++.++
T Consensus       112 ~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~  190 (266)
T cd06651         112 TRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISG-EGYGRKA  190 (266)
T ss_pred             HHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCC-CCCCchh
Confidence            4689999999999999999999999999999999999999986543211  111223457889999999876 4578999


Q ss_pred             ceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           79 DLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        79 DIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      ||||+||++|+|++|.+||...........+..   .+...                        .....+++.+.+|| 
T Consensus       191 Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~---~~~~~------------------------~~~~~~~~~~~~li-  242 (266)
T cd06651         191 DVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIAT---QPTNP------------------------QLPSHISEHARDFL-  242 (266)
T ss_pred             hhHHHHHHHHHHHHCCCCccccchHHHHHHHhc---CCCCC------------------------CCchhcCHHHHHHH-
Confidence            999999999999999999987655444433321   11000                        00123567788898 


Q ss_pred             HhcCCCCCCCcCHHHHHhccccc
Q 012191          159 TLLSVEPYKRATASAALASEYFS  181 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~Hp~F~  181 (468)
                      .||..||.+|||+.++|.||||+
T Consensus       243 ~~~~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         243 GCIFVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             HHhcCChhhCcCHHHHhcCcccc
Confidence            67778999999999999999996


No 192
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.93  E-value=1e-25  Score=222.71  Aligned_cols=154  Identities=28%  Similarity=0.434  Sum_probs=120.1

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCC----CCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGAT----DYGP   76 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~----~~s~   76 (468)
                      +.||+.||.|||+.||+|+||||+||+++.++.++|+|||++........ ......++..|+|||.+....    .++.
T Consensus       134 ~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~  212 (291)
T cd06639         134 LYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRL-RRNTSVGTPFWMAPEVIACEQQYDYSYDA  212 (291)
T ss_pred             HHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccchhcccccc-cccCccCCccccChhhhcCCCCcccccCC
Confidence            36899999999999999999999999999999999999999876543221 122346788999999985432    3678


Q ss_pred             CcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHH
Q 012191           77 SVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNL  156 (468)
Q Consensus        77 ~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dL  156 (468)
                      ++|||||||++|+|++|.+||........+..+...   .+...                       .....++..+.+|
T Consensus       213 ~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~---~~~~~-----------------------~~~~~~~~~l~~l  266 (291)
T cd06639         213 RCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRN---PPPTL-----------------------LHPEKWCRSFNHF  266 (291)
T ss_pred             ccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcC---CCCCC-----------------------CcccccCHHHHHH
Confidence            999999999999999999999877655554443221   10000                       0012356789999


Q ss_pred             HHHhcCCCCCCCcCHHHHHhccccc
Q 012191          157 IETLLSVEPYKRATASAALASEYFS  181 (468)
Q Consensus       157 L~~mL~~DP~kRpTa~e~L~Hp~F~  181 (468)
                      |.+||..||.+||++.++|+||||+
T Consensus       267 i~~~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         267 ISQCLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             HHHHhhcChhhCcCHHHHhcCcccC
Confidence            9999999999999999999999995


No 193
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.93  E-value=7.7e-26  Score=225.36  Aligned_cols=155  Identities=28%  Similarity=0.482  Sum_probs=124.8

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||+|||+.||+|+||+|+||+++.++.++|+|||++........ ......++..|+|||.+.+ ..++.++||
T Consensus       121 ~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv  198 (296)
T cd06655         121 CRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS-KRSTMVGTPYWMAPEVVTR-KAYGPKVDI  198 (296)
T ss_pred             HHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccc-cCCCcCCCccccCcchhcC-CCCCchhhH
Confidence            36899999999999999999999999999999999999999875543321 2233467889999999875 457889999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|.+||.+.+....+..+... +.+..                         .....++..+.+||.+|
T Consensus       199 ~slGvil~~lltg~~pf~~~~~~~~~~~~~~~-~~~~~-------------------------~~~~~~~~~~~~li~~~  252 (296)
T cd06655         199 WSLGIMAIEMVEGEPPYLNENPLRALYLIATN-GTPEL-------------------------QNPEKLSPIFRDFLNRC  252 (296)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CCccc-------------------------CCcccCCHHHHHHHHHH
Confidence            99999999999999999887766655544321 11110                         01135778899999999


Q ss_pred             cCCCCCCCcCHHHHHhcccccCC
Q 012191          161 LSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      |..||.+|||+.+++.||||...
T Consensus       253 l~~dp~~Rpt~~~il~~~~~~~~  275 (296)
T cd06655         253 LEMDVEKRGSAKELLQHPFLKLA  275 (296)
T ss_pred             hhcChhhCCCHHHHhhChHhhhc
Confidence            99999999999999999999863


No 194
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.93  E-value=1.3e-25  Score=218.15  Aligned_cols=154  Identities=31%  Similarity=0.486  Sum_probs=123.3

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      .||+.||.|||++|++|+||+|+||+++.++.++|+|||++.......  ......++..|++||.+.+ ..++.++|+|
T Consensus       100 ~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~  176 (262)
T cd05572         100 ACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWTFCGTPEYVAPEIILN-KGYDFSVDYW  176 (262)
T ss_pred             HHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--ccccccCCcCccChhHhcC-CCCCChhhhh
Confidence            689999999999999999999999999999999999999987665432  2233467889999999865 4578899999


Q ss_pred             eeehhhhhhhhcCCCCCCCc--hHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           82 SVGCVFAELLIGKPILQGRT--EVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        82 SLG~ILyeLltG~~pf~g~~--~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      ||||++|+|++|..||....  ..+.+..+......+.                    +       ....+..+.+||.+
T Consensus       177 slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------~-------~~~~~~~~~~~i~~  229 (262)
T cd05572         177 SLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLE--------------------F-------PNYIDKAAKDLIKQ  229 (262)
T ss_pred             hhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCC--------------------C-------CcccCHHHHHHHHH
Confidence            99999999999999998766  4444444432111100                    0       01347889999999


Q ss_pred             hcCCCCCCCcC-----HHHHHhcccccCCCC
Q 012191          160 LLSVEPYKRAT-----ASAALASEYFSTKPY  185 (468)
Q Consensus       160 mL~~DP~kRpT-----a~e~L~Hp~F~~~p~  185 (468)
                      ||..||.+|+|     +.|+++||||+...|
T Consensus       230 ~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~  260 (262)
T cd05572         230 LLRRNPEERLGNLKGGIKDIKKHKWFNGFDW  260 (262)
T ss_pred             HccCChhhCcCCcccCHHHHhcChhhhCCCC
Confidence            99999999999     999999999997544


No 195
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.93  E-value=7.2e-26  Score=219.98  Aligned_cols=152  Identities=27%  Similarity=0.425  Sum_probs=119.5

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCC----CCCCCC
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGA----TDYGPS   77 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~----~~~s~~   77 (468)
                      .||+.||.|||+.||+|+||+|+||+++.++.++|+|||++....... .......++..|+|||++...    ..++.+
T Consensus       120 ~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~  198 (275)
T cd06608         120 RETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTL-GRRNTFIGTPYWMAPEVIACDEQPDASYDAR  198 (275)
T ss_pred             HHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccceecccch-hhhcCccccccccCHhHhcccccccCCcccc
Confidence            689999999999999999999999999999999999999987654322 222345678899999988532    346788


Q ss_pred             cceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHH
Q 012191           78 VDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLI  157 (468)
Q Consensus        78 sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL  157 (468)
                      +|||||||++|+|++|.+||........+..+...   +....                       .....++..+.+||
T Consensus       199 ~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~~~~-----------------------~~~~~~~~~~~~li  252 (275)
T cd06608         199 SDVWSLGITAIELADGKPPLCDMHPMRALFKIPRN---PPPTL-----------------------KSPENWSKKFNDFI  252 (275)
T ss_pred             ccHHHhHHHHHHHHhCCCCccccchHHHHHHhhcc---CCCCC-----------------------CchhhcCHHHHHHH
Confidence            99999999999999999999866555444443221   00000                       00123678899999


Q ss_pred             HHhcCCCCCCCcCHHHHHhcccc
Q 012191          158 ETLLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       158 ~~mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      .+||..||.+|||+.+++.|||+
T Consensus       253 ~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         253 SECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             HHHhhcChhhCcCHHHHhcCCCC
Confidence            99999999999999999999996


No 196
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.93  E-value=9.2e-26  Score=224.93  Aligned_cols=157  Identities=30%  Similarity=0.519  Sum_probs=126.3

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++....... .......++..|+|||.+.+ ..++.++||
T Consensus       123 ~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv  200 (297)
T cd06659         123 CESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-PKRKSLVGTPYWMAPEVISR-TPYGTEVDI  200 (297)
T ss_pred             HHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhccccc-ccccceecCccccCHHHHcc-CCCCchhhH
Confidence            3689999999999999999999999999999999999999986544321 12234567899999999876 457899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|.+||......+.+..+..   .+. ..                      ......++..+.++|.+|
T Consensus       201 ~slG~il~el~~g~~p~~~~~~~~~~~~~~~---~~~-~~----------------------~~~~~~~~~~l~~~i~~~  254 (297)
T cd06659         201 WSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD---SPP-PK----------------------LKNAHKISPVLRDFLERM  254 (297)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc---cCC-CC----------------------ccccCCCCHHHHHHHHHH
Confidence            9999999999999999987776665554421   110 00                      011235678899999999


Q ss_pred             cCCCCCCCcCHHHHHhcccccCCCC
Q 012191          161 LSVEPYKRATASAALASEYFSTKPY  185 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F~~~p~  185 (468)
                      |+.||.+|||+.++++||||.....
T Consensus       255 l~~~P~~Rps~~~ll~~~~~~~~~~  279 (297)
T cd06659         255 LTREPQERATAQELLDHPFLLQTGL  279 (297)
T ss_pred             hcCCcccCcCHHHHhhChhhccCCC
Confidence            9999999999999999999997655


No 197
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.93  E-value=1.3e-25  Score=222.25  Aligned_cols=156  Identities=27%  Similarity=0.512  Sum_probs=125.0

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||+|||++||+|+||+|+||+++.++.++|+|||++....... .......++..|+|||.+.+ ..++.++||
T Consensus       121 ~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv  198 (285)
T cd06648         121 CLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV-PRRKSLVGTPYWMAPEVISR-LPYGTEVDI  198 (285)
T ss_pred             HHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCC-cccccccCCccccCHHHhcC-CCCCCcccH
Confidence            3689999999999999999999999999999999999999876543321 11233467899999999876 458899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|..||.+.+....+..+...  .++.                        ......++..+.+||.+|
T Consensus       199 ~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~--~~~~------------------------~~~~~~~~~~l~~li~~~  252 (285)
T cd06648         199 WSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN--LPPK------------------------LKNLHKVSPRLRSFLDRM  252 (285)
T ss_pred             HHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhc--CCCC------------------------CcccccCCHHHHHHHHHH
Confidence            99999999999999999887766665554322  1100                        000123678899999999


Q ss_pred             cCCCCCCCcCHHHHHhcccccCCC
Q 012191          161 LSVEPYKRATASAALASEYFSTKP  184 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F~~~p  184 (468)
                      |..||.+|||+.++|+|+||....
T Consensus       253 l~~~p~~Rpt~~~il~~~~~~~~~  276 (285)
T cd06648         253 LVRDPAQRATAAELLNHPFLAKAG  276 (285)
T ss_pred             cccChhhCcCHHHHccCcccccCC
Confidence            999999999999999999998754


No 198
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.93  E-value=1e-25  Score=220.59  Aligned_cols=154  Identities=30%  Similarity=0.506  Sum_probs=123.6

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.+|+|+||+|+||+++.++.++|+|||++....... .......++..|+|||.+.+. .++.++||
T Consensus       104 ~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~-~~~~~sDv  181 (274)
T cd06609         104 LREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM-SKRNTFVGTPFWMAPEVIKQS-GYDEKADI  181 (274)
T ss_pred             HHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccc-cccccccCCccccChhhhccC-CCCchhhH
Confidence            3689999999999999999999999999999999999999997665432 122344678889999999764 48999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|.+||.+.+.......+....  ++.                       +..  ..++..+.++|.+|
T Consensus       182 ~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~--~~~-----------------------~~~--~~~~~~~~~~l~~~  234 (274)
T cd06609         182 WSLGITAIELAKGEPPLSDLHPMRVLFLIPKNN--PPS-----------------------LEG--NKFSKPFKDFVSLC  234 (274)
T ss_pred             HHHHHHHHHHHhCCCCcccCchHHHHHHhhhcC--CCC-----------------------Ccc--cccCHHHHHHHHHH
Confidence            999999999999999998766544443332211  000                       000  12678899999999


Q ss_pred             cCCCCCCCcCHHHHHhcccccCC
Q 012191          161 LSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      |..||.+|||+.+++.||||...
T Consensus       235 l~~~p~~Rpt~~~il~~~~~~~~  257 (274)
T cd06609         235 LNKDPKERPSAKELLKHKFIKKA  257 (274)
T ss_pred             hhCChhhCcCHHHHhhChhhcCC
Confidence            99999999999999999999873


No 199
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.93  E-value=1.3e-25  Score=224.05  Aligned_cols=160  Identities=29%  Similarity=0.441  Sum_probs=125.1

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC--------------CccccccCCcccChh
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ--------------PLTSRVVTLWYRPPE   66 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~--------------~~~~~~gt~~Y~APE   66 (468)
                      +.||+.||.|||++||+|+||||+||+++.++.++|+|||++.........              ......++..|+|||
T Consensus       107 ~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE  186 (305)
T cd05609         107 FAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPE  186 (305)
T ss_pred             HHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCch
Confidence            368999999999999999999999999999999999999987632111000              111235678899999


Q ss_pred             hhcCCCCCCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhc
Q 012191           67 LLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETF  146 (468)
Q Consensus        67 ~l~g~~~~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  146 (468)
                      .+.+ ..++.++|||||||++|+|++|..||.+.+..+.+..+.......+.                          ..
T Consensus       187 ~~~~-~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~--------------------------~~  239 (305)
T cd05609         187 VILR-QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPE--------------------------GD  239 (305)
T ss_pred             hccC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCC--------------------------cc
Confidence            9876 45789999999999999999999999987766655555332111110                          00


Q ss_pred             CCCcHHHHHHHHHhcCCCCCCCcC---HHHHHhcccccCCCCCC
Q 012191          147 KDLPTTAVNLIETLLSVEPYKRAT---ASAALASEYFSTKPYAC  187 (468)
Q Consensus       147 ~~~s~~l~dLL~~mL~~DP~kRpT---a~e~L~Hp~F~~~p~~~  187 (468)
                      ..++.++.+||.+||+.||.+|||   +.++|+||||...+++.
T Consensus       240 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~~~~~  283 (305)
T cd05609         240 EALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLDWNG  283 (305)
T ss_pred             ccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCCCHHH
Confidence            247888999999999999999998   79999999998876654


No 200
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93  E-value=7.6e-26  Score=221.22  Aligned_cols=153  Identities=29%  Similarity=0.462  Sum_probs=131.6

Q ss_pred             HHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcceee
Q 012191            3 QLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWS   82 (468)
Q Consensus         3 QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIWS   82 (468)
                      .|+.||.|||+++||+||||.+|+|+|.+|.+||+|||++..-... .......|||+.|+|||++.. ..|+.++|.|.
T Consensus       276 EIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~-g~t~kTFCGTPEYLAPEVleD-nDYgraVDWWG  353 (516)
T KOG0690|consen  276 EIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKY-GDTTKTFCGTPEYLAPEVLED-NDYGRAVDWWG  353 (516)
T ss_pred             HHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcccc-cceeccccCChhhcCchhhcc-ccccceeehhh
Confidence            6899999999999999999999999999999999999998643322 234567899999999999976 67999999999


Q ss_pred             eehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhcC
Q 012191           83 VGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLS  162 (468)
Q Consensus        83 LG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL~  162 (468)
                      +||++|||+||+.||...+....+..|+..-...|                             ..++++++.||..+|.
T Consensus       354 ~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFP-----------------------------r~ls~eAktLLsGLL~  404 (516)
T KOG0690|consen  354 VGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFP-----------------------------RTLSPEAKTLLSGLLK  404 (516)
T ss_pred             hhHHHHHHHhccCcccccchhHHHHHHHhhhccCC-----------------------------ccCCHHHHHHHHHHhh
Confidence            99999999999999998888777777654322221                             3589999999999999


Q ss_pred             CCCCCCcC-----HHHHHhcccccCCCCC
Q 012191          163 VEPYKRAT-----ASAALASEYFSTKPYA  186 (468)
Q Consensus       163 ~DP~kRpT-----a~e~L~Hp~F~~~p~~  186 (468)
                      .||.+|..     |.|+.+|+||....|.
T Consensus       405 kdP~kRLGgGpdDakEi~~h~FF~~v~W~  433 (516)
T KOG0690|consen  405 KDPKKRLGGGPDDAKEIMRHRFFASVDWE  433 (516)
T ss_pred             cChHhhcCCCchhHHHHHhhhhhccCCHH
Confidence            99999974     8999999999998774


No 201
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.93  E-value=1e-25  Score=219.12  Aligned_cols=153  Identities=29%  Similarity=0.493  Sum_probs=121.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCC-----CCCccccccCCcccChhhhcCCCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH-----RQPLTSRVVTLWYRPPELLLGATDYG   75 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~-----~~~~~~~~gt~~Y~APE~l~g~~~~s   75 (468)
                      +.||+.||+|||+.||+|+||+|+||+++.++.++|+|||++.......     ........++..|+|||.+.+ ..++
T Consensus       108 ~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~  186 (265)
T cd06631         108 TKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINE-SGYG  186 (265)
T ss_pred             HHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcC-CCCc
Confidence            3689999999999999999999999999999999999999987543211     112234467889999999876 4578


Q ss_pred             CCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHH
Q 012191           76 PSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVN  155 (468)
Q Consensus        76 ~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~d  155 (468)
                      .++|||||||++|+|++|..||...+.......+....+..+                          .....++..+.+
T Consensus       187 ~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~  240 (265)
T cd06631         187 RKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMP--------------------------RLPDSFSAAAID  240 (265)
T ss_pred             chhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCC--------------------------CCCCCCCHHHHH
Confidence            999999999999999999999987665544433322111110                          111357888999


Q ss_pred             HHHHhcCCCCCCCcCHHHHHhcccc
Q 012191          156 LIETLLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       156 LL~~mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      ||.+||..||.+|||+.++|.||||
T Consensus       241 ~i~~~l~~~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         241 FVTSCLTRDQHERPSALQLLRHDFL  265 (265)
T ss_pred             HHHHHhcCCcccCCCHHHHhcCCCC
Confidence            9999999999999999999999997


No 202
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.92  E-value=9.9e-26  Score=228.77  Aligned_cols=177  Identities=26%  Similarity=0.399  Sum_probs=121.3

Q ss_pred             HHHHHHHHHHHhC-CCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSR-GVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~-gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.||.|||+. +|+|+||||+|||++.++.+||+|||++......   ......++..|+|||++.+ ..++.++||
T Consensus       110 ~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv  185 (333)
T cd06650         110 IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQG-THYSVQSDI  185 (333)
T ss_pred             HHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh---ccccCCCCccccCHHHhcC-CCCCcHHHH
Confidence            5899999999985 7999999999999999999999999998654322   2234568999999999976 458899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHH--cCCCCchhhhccCCCcc---ccCCCCC-CCCc--hh-----h---h
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKL--CGSPPDDYWKKSKLPHA---TLFKPQQ-PYDS--SL-----R---E  144 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~--~g~p~~~~~~~~~~~~~---~~~~~~~-~~~~--~l-----~---~  144 (468)
                      |||||++|+|++|..||......... .++..  .+.+.............   ..+.+.. +...  .+     .   .
T Consensus       186 wslG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (333)
T cd06650         186 WSMGLSLVEMAIGRYPIPPPDAKELE-LMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPP  264 (333)
T ss_pred             HHHHHHHHHHHHCCCCCCCcchhHHH-HHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCc
Confidence            99999999999999999876543332 22211  11111100000000000   0000000 0000  00     0   0


Q ss_pred             --hcCCCcHHHHHHHHHhcCCCCCCCcCHHHHHhcccccCC
Q 012191          145 --TFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       145 --~~~~~s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                        ....++.++++||.+||++||.+|||+.++|.|+||+..
T Consensus       265 ~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~  305 (333)
T cd06650         265 KLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS  305 (333)
T ss_pred             cCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence              011357889999999999999999999999999999864


No 203
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a 
Probab=99.92  E-value=9.2e-26  Score=217.56  Aligned_cols=152  Identities=28%  Similarity=0.454  Sum_probs=119.7

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++........ ......++..|+|||.+.+ ..++.++||
T Consensus       105 ~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~-~~~~~~~Di  182 (256)
T cd06612         105 LYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA-KRNTVIGTPFWMAPEVIQE-IGYNNKADI  182 (256)
T ss_pred             HHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCcc-ccccccCCccccCHHHHhc-CCCCchhhH
Confidence            36899999999999999999999999999999999999999876543321 2233457889999999876 467899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||||||+|+|++|.+||...........+..   .....                       ......++..+.+||.+|
T Consensus       183 ~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~-----------------------~~~~~~~~~~~~~~i~~~  236 (256)
T cd06612         183 WSLGITAIEMAEGKPPYSDIHPMRAIFMIPN---KPPPT-----------------------LSDPEKWSPEFNDFVKKC  236 (256)
T ss_pred             HHHHHHHHHHHhCCCCCCCcchhhhhhhhcc---CCCCC-----------------------CCchhhcCHHHHHHHHHH
Confidence            9999999999999999987655443322211   00000                       000124678899999999


Q ss_pred             cCCCCCCCcCHHHHHhcccc
Q 012191          161 LSVEPYKRATASAALASEYF  180 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F  180 (468)
                      |+.||.+|||+.++|.||||
T Consensus       237 l~~~P~~Rps~~~il~~~~~  256 (256)
T cd06612         237 LVKDPEERPSAIQLLQHPFI  256 (256)
T ss_pred             HhcChhhCcCHHHHhcCCCC
Confidence            99999999999999999997


No 204
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.92  E-value=1.5e-25  Score=216.20  Aligned_cols=156  Identities=33%  Similarity=0.548  Sum_probs=124.2

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC-------CCccccccCCcccChhhhcCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR-------QPLTSRVVTLWYRPPELLLGATD   73 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~-------~~~~~~~gt~~Y~APE~l~g~~~   73 (468)
                      +.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++........       .......++..|++||.+.+. .
T Consensus        99 ~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~-~  177 (265)
T cd05579          99 IAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQ-G  177 (265)
T ss_pred             HHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCC-C
Confidence            47999999999999999999999999999999999999999865433211       022334567889999998764 4


Q ss_pred             CCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHH
Q 012191           74 YGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTA  153 (468)
Q Consensus        74 ~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l  153 (468)
                      ++.++|||||||++|+|++|..||......+....+......++                          . ...++..+
T Consensus       178 ~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------------~-~~~~~~~~  230 (265)
T cd05579         178 HSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWP--------------------------E-DVEVSDEA  230 (265)
T ss_pred             CCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCC--------------------------c-cccCCHHH
Confidence            78899999999999999999999988776666555433110000                          0 01257889


Q ss_pred             HHHHHHhcCCCCCCCcCH---HHHHhcccccCCC
Q 012191          154 VNLIETLLSVEPYKRATA---SAALASEYFSTKP  184 (468)
Q Consensus       154 ~dLL~~mL~~DP~kRpTa---~e~L~Hp~F~~~p  184 (468)
                      .+||.+||+.+|.+|||+   .++|+||||+...
T Consensus       231 ~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~~  264 (265)
T cd05579         231 IDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGID  264 (265)
T ss_pred             HHHHHHHhcCCHhhcCCCccHHHHhcCccccCCC
Confidence            999999999999999999   9999999998643


No 205
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.92  E-value=1.1e-25  Score=220.86  Aligned_cols=150  Identities=27%  Similarity=0.420  Sum_probs=118.6

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCC-cEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEG-VLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g-~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +.||+.||.|||+.||+|+||||+||+++.++ .++|+|||++......     ....++..|+|||++.+ ..++.++|
T Consensus       115 ~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~-~~~~~~~D  188 (267)
T PHA03390        115 IRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP-----SCYDGTLDYFSPEKIKG-HNYDVSFD  188 (267)
T ss_pred             HHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC-----ccCCCCCcccChhhhcC-CCCCchhh
Confidence            36999999999999999999999999999988 9999999998765432     23357889999999976 45789999


Q ss_pred             eeeeehhhhhhhhcCCCCCCCchHHH-HHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           80 LWSVGCVFAELLIGKPILQGRTEVEQ-LHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        80 IWSLG~ILyeLltG~~pf~g~~~~e~-l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |||+||++|+|++|..||........ ...+.... ...                         ....+.+++.+.+||.
T Consensus       189 vwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~-------------------------~~~~~~~~~~~~~li~  242 (267)
T PHA03390        189 WWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QKK-------------------------LPFIKNVSKNANDFVQ  242 (267)
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-ccc-------------------------CCcccccCHHHHHHHH
Confidence            99999999999999999976543321 11111111 000                         0112357899999999


Q ss_pred             HhcCCCCCCCcC-HHHHHhcccccC
Q 012191          159 TLLSVEPYKRAT-ASAALASEYFST  182 (468)
Q Consensus       159 ~mL~~DP~kRpT-a~e~L~Hp~F~~  182 (468)
                      +||+.||.+|++ ++++|+||||..
T Consensus       243 ~~l~~~p~~R~~~~~~~l~h~~~~~  267 (267)
T PHA03390        243 SMLKYNINYRLTNYNEIIKHPFLKI  267 (267)
T ss_pred             HHhccChhhCCchHHHHhcCCcccC
Confidence            999999999996 599999999963


No 206
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.92  E-value=2.1e-25  Score=219.58  Aligned_cols=155  Identities=22%  Similarity=0.377  Sum_probs=121.6

Q ss_pred             HHHHHHHHHHHh-CCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCC-----CCC
Q 012191            2 NQLLHGLEHCHS-RGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGAT-----DYG   75 (468)
Q Consensus         2 ~QLL~gL~yLHs-~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~-----~~s   75 (468)
                      .||+.||.|||+ .||+|+||||+||+++.++.++|+|||++......   ......++..|+|||.+.+..     .++
T Consensus       109 ~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~  185 (286)
T cd06622         109 YAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS---LAKTNIGCQSYMAPERIKSGGPNQNPTYT  185 (286)
T ss_pred             HHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC---ccccCCCccCccCcchhcCCCCCccCCCC
Confidence            689999999997 59999999999999999999999999998655322   123346788899999985432     357


Q ss_pred             CCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHH
Q 012191           76 PSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVN  155 (468)
Q Consensus        76 ~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~d  155 (468)
                      .++|||||||++|+|++|..||...........+.......+.                         .....++.++.+
T Consensus       186 ~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~  240 (286)
T cd06622         186 VQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPP-------------------------TLPSGYSDDAQD  240 (286)
T ss_pred             cccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCC-------------------------CCCcccCHHHHH
Confidence            8999999999999999999999776554444333322211111                         111347889999


Q ss_pred             HHHHhcCCCCCCCcCHHHHHhcccccCCC
Q 012191          156 LIETLLSVEPYKRATASAALASEYFSTKP  184 (468)
Q Consensus       156 LL~~mL~~DP~kRpTa~e~L~Hp~F~~~p  184 (468)
                      ||.+||..+|.+||++.+++.||||....
T Consensus       241 li~~~l~~~p~~Rp~~~~l~~~~~~~~~~  269 (286)
T cd06622         241 FVAKCLNKIPNRRPTYAQLLEHPWLVKYK  269 (286)
T ss_pred             HHHHHcccCcccCCCHHHHhcChhhhhcc
Confidence            99999999999999999999999998754


No 207
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.92  E-value=1.1e-25  Score=221.45  Aligned_cols=156  Identities=25%  Similarity=0.371  Sum_probs=119.8

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.||+|+||||+|||++.++.++|+|||++......   .....+++..|+|||.+.+ ..++.++|+
T Consensus       101 ~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv  176 (279)
T cd06619         101 AVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS---IAKTYVGTNAYMAPERISG-EQYGIHSDV  176 (279)
T ss_pred             HHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc---cccCCCCChhhcCceeecC-CCCCCcchH
Confidence            368999999999999999999999999999999999999998755432   2334578999999999876 458899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHH---HHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVE---QLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLI  157 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e---~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL  157 (468)
                      |||||++|+|++|..||.......   ...............                       ......+++++.+||
T Consensus       177 wslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~li  233 (279)
T cd06619         177 WSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPP-----------------------VLPVGQFSEKFVHFI  233 (279)
T ss_pred             HHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCC-----------------------CCCCCcCCHHHHHHH
Confidence            999999999999999996532111   001111111000000                       001124678899999


Q ss_pred             HHhcCCCCCCCcCHHHHHhcccccCC
Q 012191          158 ETLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       158 ~~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      .+||..||.+||++.++|.||||...
T Consensus       234 ~~~l~~~P~~Rp~~~eil~~~~~~~~  259 (279)
T cd06619         234 TQCMRKQPKERPAPENLMDHPFIVQY  259 (279)
T ss_pred             HHHhhCChhhCCCHHHHhcCcccccc
Confidence            99999999999999999999999764


No 208
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.92  E-value=1.7e-25  Score=221.46  Aligned_cols=151  Identities=29%  Similarity=0.463  Sum_probs=125.0

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      .||+.||.|||+.||+|+||+|.|||++.++.+||+|||++......    .....+++.|+|||.+.+ ..++.++|||
T Consensus       108 ~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~-~~~~~~~Di~  182 (290)
T cd05580         108 AQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR----TYTLCGTPEYLAPEIILS-KGYGKAVDWW  182 (290)
T ss_pred             HHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC----CCCCCCCccccChhhhcC-CCCCccccHH
Confidence            68999999999999999999999999999999999999998765433    233467899999999876 3578899999


Q ss_pred             eeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhc
Q 012191           82 SVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLL  161 (468)
Q Consensus        82 SLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL  161 (468)
                      ||||++|+|++|..||...........+..  +.+.                           ....++..+.++|.+||
T Consensus       183 slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~---------------------------~~~~~~~~l~~li~~~l  233 (290)
T cd05580         183 ALGILIYEMLAGYPPFFDDNPIQIYEKILE--GKVR---------------------------FPSFFSPDAKDLIRNLL  233 (290)
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHhc--CCcc---------------------------CCccCCHHHHHHHHHHc
Confidence            999999999999999988775555555432  1110                           01235788999999999


Q ss_pred             CCCCCCCc-----CHHHHHhcccccCCCCC
Q 012191          162 SVEPYKRA-----TASAALASEYFSTKPYA  186 (468)
Q Consensus       162 ~~DP~kRp-----Ta~e~L~Hp~F~~~p~~  186 (468)
                      ..||.+|+     ++.+++.||||....|.
T Consensus       234 ~~~p~~R~~~~~~~~~~l~~~~~~~~~~~~  263 (290)
T cd05580         234 QVDLTKRLGNLKNGVNDIKNHPWFAGIDWI  263 (290)
T ss_pred             cCCHHHccCcccCCHHHHHcCcccccCCHH
Confidence            99999999     99999999999886654


No 209
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=99.92  E-value=1.4e-25  Score=218.47  Aligned_cols=153  Identities=29%  Similarity=0.435  Sum_probs=117.6

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhc--CCCCCCCCcc
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLL--GATDYGPSVD   79 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~--g~~~~s~~sD   79 (468)
                      .||+.||.|||+.||+|+||||+||+++.++.++|+|||++...... ........++..|+|||.+.  ....++.++|
T Consensus       113 ~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~D  191 (267)
T cd06645         113 RETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITAT-IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCD  191 (267)
T ss_pred             HHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCc-ccccccccCcccccChhhhccccCCCCCchhh
Confidence            68999999999999999999999999999999999999998655432 12223457889999999874  2245788999


Q ss_pred             eeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           80 LWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        80 IWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      +|||||++|+|++|.+||........+..+......++  .                     + .....++..+.+||.+
T Consensus       192 vwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~--~---------------------~-~~~~~~~~~~~~li~~  247 (267)
T cd06645         192 IWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPP--K---------------------L-KDKMKWSNSFHHFVKM  247 (267)
T ss_pred             hHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCC--c---------------------c-cccCCCCHHHHHHHHH
Confidence            99999999999999999876554433332211110000  0                     0 0012467789999999


Q ss_pred             hcCCCCCCCcCHHHHHhccc
Q 012191          160 LLSVEPYKRATASAALASEY  179 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~Hp~  179 (468)
                      ||..||.+|||+.++|+|||
T Consensus       248 ~l~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         248 ALTKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             HccCCchhCcCHHHHhcCCC
Confidence            99999999999999999998


No 210
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92  E-value=1.2e-25  Score=234.29  Aligned_cols=155  Identities=26%  Similarity=0.448  Sum_probs=128.8

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcC----CCCCCCC
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLG----ATDYGPS   77 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g----~~~~s~~   77 (468)
                      +|+|.||.|||+++|||||||..|||+.-+|.|+|+|||.+-.... ....-.+++||++|||||++.+    ..+|+++
T Consensus       137 ~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~-t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDyk  215 (1187)
T KOG0579|consen  137 YQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS-TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYK  215 (1187)
T ss_pred             HHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchh-HHhhhccccCCcccccchheeeccccCCCchhh
Confidence            6899999999999999999999999999999999999998743322 2233457899999999999854    3579999


Q ss_pred             cceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHH
Q 012191           78 VDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLI  157 (468)
Q Consensus        78 sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL  157 (468)
                      +||||||++|.||.-+.||...-+.+..+-+|.+.  .|| ..                       ......+..+.|||
T Consensus       216 aDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKS--ePP-TL-----------------------lqPS~Ws~~F~DfL  269 (1187)
T KOG0579|consen  216 ADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS--EPP-TL-----------------------LQPSHWSRSFSDFL  269 (1187)
T ss_pred             hhHHhhhhHHHHHhccCCCccccchHHHHHHHhhc--CCC-cc-----------------------cCcchhhhHHHHHH
Confidence            99999999999999999999988888877777552  111 10                       00124567899999


Q ss_pred             HHhcCCCCCCCcCHHHHHhcccccCC
Q 012191          158 ETLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       158 ~~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      .+||..||..||+++++|+||||+..
T Consensus       270 k~cL~Knp~~Rp~aaqll~Hpfv~~~  295 (1187)
T KOG0579|consen  270 KRCLVKNPRNRPPAAQLLKHPFVQNA  295 (1187)
T ss_pred             HHHHhcCCccCCCHHHHhhCcccccC
Confidence            99999999999999999999999874


No 211
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of 
Probab=99.92  E-value=1.4e-25  Score=220.43  Aligned_cols=156  Identities=29%  Similarity=0.474  Sum_probs=122.2

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      .||+.||.|||+.||+|+||+|+||+++.++.++|+|||++......  .......++..|+|||.+.+. .++.++|||
T Consensus       102 ~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~~y~~PE~~~~~-~~~~~~Di~  178 (277)
T cd05577         102 AQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG--KKIKGRAGTPGYMAPEVLQGE-VYDFSVDWF  178 (277)
T ss_pred             HHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccC--CccccccCCCCcCCHHHhcCC-CCCchhhhH
Confidence            68999999999999999999999999999999999999998755432  222345678899999998764 488899999


Q ss_pred             eeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhc
Q 012191           82 SVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLL  161 (468)
Q Consensus        82 SLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL  161 (468)
                      ||||++|+|++|..||.+.........+.......+                         ......+++.+.+||.+||
T Consensus       179 slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~li~~~l  233 (277)
T cd05577         179 ALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMA-------------------------VEYPDKFSPEAKDLCEALL  233 (277)
T ss_pred             HHHHHHHHHhhCCCCCCCCcccccHHHHHhcccccc-------------------------ccCCccCCHHHHHHHHHHc
Confidence            999999999999999977554222222211100000                         0111346889999999999


Q ss_pred             CCCCCCCc-----CHHHHHhcccccCCCC
Q 012191          162 SVEPYKRA-----TASAALASEYFSTKPY  185 (468)
Q Consensus       162 ~~DP~kRp-----Ta~e~L~Hp~F~~~p~  185 (468)
                      +.||.+||     ++.+++.||||....|
T Consensus       234 ~~~p~~R~~~~~~~~~~ll~h~~~~~~~~  262 (277)
T cd05577         234 QKDPEKRLGCRGGSADEVREHPLFKDLNW  262 (277)
T ss_pred             cCChhHccCCCcccHHHHHhChhhhcCCh
Confidence            99999999     9999999999987665


No 212
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.92  E-value=2e-25  Score=219.19  Aligned_cols=156  Identities=28%  Similarity=0.460  Sum_probs=122.6

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcC----CCCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLG----ATDYGP   76 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g----~~~~s~   76 (468)
                      +.||+.||.|||++||+|+||+|+||+++.++.++|+|||++....... .......+++.|++||.+..    ...++.
T Consensus       109 ~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~  187 (280)
T cd06611         109 CRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL-QKRDTFIGTPYWMAPEVVACETFKDNPYDY  187 (280)
T ss_pred             HHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcccc-cccceeecchhhcCHHHHhhcccCCCCCCc
Confidence            4699999999999999999999999999999999999999876543321 12233467889999999852    234678


Q ss_pred             CcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHH
Q 012191           77 SVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNL  156 (468)
Q Consensus        77 ~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dL  156 (468)
                      ++|||||||++|+|++|.+||.+......+..+...  .++.                        ......++..+.+|
T Consensus       188 ~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~------------------------~~~~~~~~~~~~~l  241 (280)
T cd06611         188 KADIWSLGITLIELAQMEPPHHELNPMRVLLKILKS--EPPT------------------------LDQPSKWSSSFNDF  241 (280)
T ss_pred             cccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcC--CCCC------------------------cCCcccCCHHHHHH
Confidence            999999999999999999999887665555444221  1100                        00012467889999


Q ss_pred             HHHhcCCCCCCCcCHHHHHhcccccCC
Q 012191          157 IETLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       157 L~~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      |.+||..||.+|||+.++|+||||...
T Consensus       242 i~~~l~~~p~~Rps~~~il~~~~~~~~  268 (280)
T cd06611         242 LKSCLVKDPDDRPTAAELLKHPFVSDQ  268 (280)
T ss_pred             HHHHhccChhhCcCHHHHhcChhhccc
Confidence            999999999999999999999999863


No 213
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.92  E-value=8e-26  Score=251.25  Aligned_cols=158  Identities=32%  Similarity=0.490  Sum_probs=125.4

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC---CCccccccCCcccChhhhcCCC--CCCC
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR---QPLTSRVVTLWYRPPELLLGAT--DYGP   76 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~---~~~~~~~gt~~Y~APE~l~g~~--~~s~   76 (468)
                      .|++.||.|||+.|||||||||.|||++.+|.+|++|||.|..+.....   ..+....||+.|||||++.+..  .-.-
T Consensus      1341 ~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~ 1420 (1509)
T KOG4645|consen 1341 KQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGG 1420 (1509)
T ss_pred             HHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCc
Confidence            5999999999999999999999999999999999999999987665421   2335678999999999998743  3456


Q ss_pred             CcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHH
Q 012191           77 SVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNL  156 (468)
Q Consensus        77 ~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dL  156 (468)
                      +.||||||||+.||+||+.||..-+..-++.-.+.. |.                 +|+.|         ..++.+..+|
T Consensus      1421 A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~-gh-----------------~Pq~P---------~~ls~~g~dF 1473 (1509)
T KOG4645|consen 1421 AADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAA-GH-----------------KPQIP---------ERLSSEGRDF 1473 (1509)
T ss_pred             chhhhcccceEEEeecCCCchhhccchhHHHhHHhc-cC-----------------CCCCc---------hhhhHhHHHH
Confidence            899999999999999999999764443322221111 21                 12222         2388999999


Q ss_pred             HHHhcCCCCCCCcCHHHHHhcccccCCCCC
Q 012191          157 IETLLSVEPYKRATASAALASEYFSTKPYA  186 (468)
Q Consensus       157 L~~mL~~DP~kRpTa~e~L~Hp~F~~~p~~  186 (468)
                      |+.||..||.+|.++.|+|+|.|-+.....
T Consensus      1474 le~Cl~~dP~~Rw~~~qlle~~f~~~~~d~ 1503 (1509)
T KOG4645|consen 1474 LEHCLEQDPKMRWTASQLLEHAFGKSCTDE 1503 (1509)
T ss_pred             HHHHHhcCchhhhHHHHHHHhhcccccccc
Confidence            999999999999999999999997665443


No 214
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.92  E-value=9.2e-26  Score=224.74  Aligned_cols=154  Identities=27%  Similarity=0.493  Sum_probs=121.7

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      .||+.||.|||+.||+|+||||+|||++.++.++|+|||++....... .......+++.|+|||.+.+ ..++.++|+|
T Consensus       122 ~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~  199 (297)
T cd06656         122 RECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SKRSTMVGTPYWMAPEVVTR-KAYGPKVDIW  199 (297)
T ss_pred             HHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCc-cCcCcccCCccccCHHHHcC-CCCCcHHHHH
Confidence            689999999999999999999999999999999999999987654332 12234467889999999876 4578999999


Q ss_pred             eeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhc
Q 012191           82 SVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLL  161 (468)
Q Consensus        82 SLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL  161 (468)
                      ||||++|+|++|.+||.+.+....+..+.. .+.+..                         .....++..+.+||.+||
T Consensus       200 slGvil~~l~tg~~pf~~~~~~~~~~~~~~-~~~~~~-------------------------~~~~~~~~~~~~li~~~l  253 (297)
T cd06656         200 SLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTPEL-------------------------QNPERLSAVFRDFLNRCL  253 (297)
T ss_pred             HHHHHHHHHHhCCCCCCCCCcchheeeecc-CCCCCC-------------------------CCccccCHHHHHHHHHHc
Confidence            999999999999999977654333222111 111110                         011346788999999999


Q ss_pred             CCCCCCCcCHHHHHhcccccCC
Q 012191          162 SVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       162 ~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      ..||.+|||+.++|.||||...
T Consensus       254 ~~~p~~Rps~~~il~~~~~~~~  275 (297)
T cd06656         254 EMDVDRRGSAKELLQHPFLKLA  275 (297)
T ss_pred             cCChhhCcCHHHHhcCchhccc
Confidence            9999999999999999999864


No 215
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.92  E-value=2.7e-25  Score=218.04  Aligned_cols=155  Identities=25%  Similarity=0.410  Sum_probs=120.2

Q ss_pred             CHHHHHHHHHHHhC-CCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCC---CCCCC
Q 012191            1 MNQLLHGLEHCHSR-GVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGA---TDYGP   76 (468)
Q Consensus         1 m~QLL~gL~yLHs~-gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~---~~~s~   76 (468)
                      +.||+.||+|||++ +++|+||||+|||++.++.+||+|||++......  ...+...++..|+|||.+.+.   ..++.
T Consensus       109 ~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~  186 (283)
T cd06617         109 AVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS--VAKTIDAGCKPYMAPERINPELNQKGYDV  186 (283)
T ss_pred             HHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccc--cccccccCCccccChhhcCCcccccccCc
Confidence            36899999999997 9999999999999999999999999998765432  112334678899999988642   34688


Q ss_pred             CcceeeeehhhhhhhhcCCCCCCC-chHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHH
Q 012191           77 SVDLWSVGCVFAELLIGKPILQGR-TEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVN  155 (468)
Q Consensus        77 ~sDIWSLG~ILyeLltG~~pf~g~-~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~d  155 (468)
                      ++|+|||||++|+|++|..||... ...+.+..+...  ..+ ..                        ....++.++.+
T Consensus       187 ~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~--~~~-~~------------------------~~~~~~~~l~~  239 (283)
T cd06617         187 KSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEE--PSP-QL------------------------PAEKFSPEFQD  239 (283)
T ss_pred             cccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhc--CCC-CC------------------------CccccCHHHHH
Confidence            999999999999999999999643 223333333221  000 00                        00236788999


Q ss_pred             HHHHhcCCCCCCCcCHHHHHhcccccCCC
Q 012191          156 LIETLLSVEPYKRATASAALASEYFSTKP  184 (468)
Q Consensus       156 LL~~mL~~DP~kRpTa~e~L~Hp~F~~~p  184 (468)
                      ||.+||..||.+|||+.+++.||||....
T Consensus       240 li~~~l~~~p~~Rp~~~~il~~~~~~~~~  268 (283)
T cd06617         240 FVNKCLKKNYKERPNYPELLQHPFFELHL  268 (283)
T ss_pred             HHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence            99999999999999999999999998753


No 216
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.92  E-value=2.7e-25  Score=218.63  Aligned_cols=153  Identities=29%  Similarity=0.461  Sum_probs=118.8

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcC----CCCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLG----ATDYGP   76 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g----~~~~s~   76 (468)
                      +.||+.||.|||+.+|+|+||||+||+++.++.++|+|||++....... .......+++.|+|||++..    ...++.
T Consensus       130 ~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~  208 (286)
T cd06638         130 LHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTR-LRRNTSVGTPFWMAPEVIACEQQLDSTYDA  208 (286)
T ss_pred             HHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCceeecccCC-CccccccCCCcccChhhhchhhhccccccc
Confidence            3689999999999999999999999999999999999999987654322 12234468899999998853    234788


Q ss_pred             CcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHH
Q 012191           77 SVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNL  156 (468)
Q Consensus        77 ~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dL  156 (468)
                      ++||||+||++|+|++|..||........+..+...  .++.                        ......++..+.+|
T Consensus       209 ~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~--~~~~------------------------~~~~~~~~~~~~~l  262 (286)
T cd06638         209 RCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRN--PPPT------------------------LHQPELWSNEFNDF  262 (286)
T ss_pred             hhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcccc--CCCc------------------------ccCCCCcCHHHHHH
Confidence            999999999999999999999876554433322110  0000                        00001356789999


Q ss_pred             HHHhcCCCCCCCcCHHHHHhcccc
Q 012191          157 IETLLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       157 L~~mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      |.+||+.||.+|||+.++|+|+||
T Consensus       263 i~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         263 IRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             HHHHccCCcccCCCHHHHhhcccC
Confidence            999999999999999999999997


No 217
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.92  E-value=2.6e-25  Score=218.43  Aligned_cols=148  Identities=23%  Similarity=0.321  Sum_probs=118.9

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC-CCccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR-QPLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~-~~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +.||+.||.|||++||+|+||||+|||++.++.++|+|||++........ .......+++.|+|||.+.+ ..++.++|
T Consensus       130 ~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sD  208 (283)
T cd05048         130 AIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILY-GKFTTESD  208 (283)
T ss_pred             HHHHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccccCHHHhcc-CcCchhhh
Confidence            36899999999999999999999999999999999999999875433221 12233456788999999876 45889999


Q ss_pred             eeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           80 LWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        80 IWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      ||||||++|+|++ |..||.+....+....+....  .+                          .....++.++.+|+.
T Consensus       209 v~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~~--~~--------------------------~~~~~~~~~~~~l~~  260 (283)
T cd05048         209 IWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQ--LL--------------------------PCPEDCPARVYALMI  260 (283)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC--cC--------------------------CCcccCCHHHHHHHH
Confidence            9999999999998 999998877766555543211  00                          011357899999999


Q ss_pred             HhcCCCCCCCcCHHHHHhc
Q 012191          159 TLLSVEPYKRATASAALAS  177 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~H  177 (468)
                      +||+.||.+|||+.+++++
T Consensus       261 ~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         261 ECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             HHccCChhhCcCHHHHHHH
Confidence            9999999999999999975


No 218
>PHA02988 hypothetical protein; Provisional
Probab=99.92  E-value=3.7e-25  Score=219.41  Aligned_cols=144  Identities=21%  Similarity=0.205  Sum_probs=118.1

Q ss_pred             HHHHHHHHHHHh-CCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCC-CCCCCCcc
Q 012191            2 NQLLHGLEHCHS-RGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGA-TDYGPSVD   79 (468)
Q Consensus         2 ~QLL~gL~yLHs-~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~-~~~s~~sD   79 (468)
                      .|++.||.|||+ .+++||||||+|||++.++.+||+|||++......    .....++..|+|||++.+. ..++.++|
T Consensus       129 ~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~k~D  204 (283)
T PHA02988        129 IDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP----PFKNVNFMVYFSYKMLNDIFSEYTIKDD  204 (283)
T ss_pred             HHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccc----cccccCcccccCHHHhhhccccccchhh
Confidence            589999999998 49999999999999999999999999998755432    2334678899999998652 46899999


Q ss_pred             eeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           80 LWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        80 IWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      ||||||++|||++|..||.+.+..+.+..+......++.                           ...++..+.+||.+
T Consensus       205 i~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~---------------------------~~~~~~~l~~li~~  257 (283)
T PHA02988        205 IYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKL---------------------------PLDCPLEIKCIVEA  257 (283)
T ss_pred             hhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCC---------------------------CCcCcHHHHHHHHH
Confidence            999999999999999999988776666655432211110                           02467889999999


Q ss_pred             hcCCCCCCCcCHHHHHh
Q 012191          160 LLSVEPYKRATASAALA  176 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~  176 (468)
                      ||+.||.+|||+.++|+
T Consensus       258 cl~~dp~~Rps~~ell~  274 (283)
T PHA02988        258 CTSHDSIKRPNIKEILY  274 (283)
T ss_pred             HhcCCcccCcCHHHHHH
Confidence            99999999999999986


No 219
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.92  E-value=3.2e-25  Score=222.01  Aligned_cols=178  Identities=25%  Similarity=0.307  Sum_probs=121.2

Q ss_pred             CHHHHHHHHHHHh-CCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHS-RGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs-~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +.||+.||.|||+ .+|+|+||||+|||++.++.++|+|||++......   ......++..|+|||.+.+ ..++.++|
T Consensus       105 ~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---~~~~~~~~~~~~aPE~~~~-~~~~~~~D  180 (308)
T cd06615         105 SIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANSFVGTRSYMSPERLQG-THYTVQSD  180 (308)
T ss_pred             HHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccccc---ccccCCCCcCccChhHhcC-CCCCccch
Confidence            3689999999998 59999999999999999999999999998654322   1234577899999999876 45889999


Q ss_pred             eeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCC-CCchhhhccCCCccccCCCCCCCCchh---------hhhcCCC
Q 012191           80 LWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGS-PPDDYWKKSKLPHATLFKPQQPYDSSL---------RETFKDL  149 (468)
Q Consensus        80 IWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~-p~~~~~~~~~~~~~~~~~~~~~~~~~l---------~~~~~~~  149 (468)
                      ||||||++|+|++|..||.+.+.... ..++..... ..........................+         ......+
T Consensus       181 iwslG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (308)
T cd06615         181 IWSLGLSLVEMAIGRYPIPPPDAKEL-EAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAF  259 (308)
T ss_pred             HHHHHHHHHHHHhCCCCCCCcchhhH-HHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCccc
Confidence            99999999999999999987654332 222211110 000000000000000000000000000         0001136


Q ss_pred             cHHHHHHHHHhcCCCCCCCcCHHHHHhcccccCC
Q 012191          150 PTTAVNLIETLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       150 s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      +.++.+||.+||..||.+|||+.++|.||||...
T Consensus       260 ~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~  293 (308)
T cd06615         260 SDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA  293 (308)
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence            7889999999999999999999999999999864


No 220
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.92  E-value=5.1e-25  Score=215.07  Aligned_cols=156  Identities=29%  Similarity=0.570  Sum_probs=120.4

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC-CCccccccCCcccChhhhcCCC-CCCCCcc
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR-QPLTSRVVTLWYRPPELLLGAT-DYGPSVD   79 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~-~~~~~~~gt~~Y~APE~l~g~~-~~s~~sD   79 (468)
                      .||+.||.|||+.|++|+||+|+||+++.++.++|+|||++........ .......++..|+|||.+.... .++.++|
T Consensus       115 ~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~D  194 (272)
T cd06629         115 EQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVD  194 (272)
T ss_pred             HHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccch
Confidence            6899999999999999999999999999999999999999865432111 1123345788999999987543 4788999


Q ss_pred             eeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           80 LWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        80 IWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      +|||||++|+|++|..||......+.+..+......+.                    .   .......++..+.+||.+
T Consensus       195 v~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------~---~~~~~~~~~~~~~~li~~  251 (272)
T cd06629         195 IWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPP--------------------I---PPDVSMNLSPVALDFLNA  251 (272)
T ss_pred             hHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCc--------------------C---CccccccCCHHHHHHHHH
Confidence            99999999999999999976555444333221110000                    0   011224578999999999


Q ss_pred             hcCCCCCCCcCHHHHHhcccc
Q 012191          160 LLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      ||..||.+|||+.++|+||||
T Consensus       252 ~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         252 CFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             HhcCChhhCCCHHHHhhCCCC
Confidence            999999999999999999997


No 221
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.92  E-value=2.7e-25  Score=217.56  Aligned_cols=156  Identities=29%  Similarity=0.497  Sum_probs=123.3

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++....... .......++..|+|||.+.+...++.++|+
T Consensus       107 ~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv  185 (277)
T cd06917         107 IREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS-SKRSTFVGTPYWMAPEVITEGKYYDTKADI  185 (277)
T ss_pred             HHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc-cccccccCCcceeCHHHhccCCccccchhH
Confidence            3689999999999999999999999999999999999999987665433 222344688899999998765667899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|.+||.+.........+...  .++                 .      +.  ...++.++.+||.+|
T Consensus       186 ~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~--~~~-----------------~------~~--~~~~~~~~~~~i~~~  238 (277)
T cd06917         186 WSLGITIYEMATGNPPYSDVDAFRAMMLIPKS--KPP-----------------R------LE--DNGYSKLLREFVAAC  238 (277)
T ss_pred             HHHHHHHHHHHhCCCCCCCCChhhhhhccccC--CCC-----------------C------CC--cccCCHHHHHHHHHH
Confidence            99999999999999999876543332211110  000                 0      00  012678899999999


Q ss_pred             cCCCCCCCcCHHHHHhcccccCCC
Q 012191          161 LSVEPYKRATASAALASEYFSTKP  184 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F~~~p  184 (468)
                      |..||.+|||+.+++.|+||+...
T Consensus       239 l~~~p~~R~~~~~il~~~~~~~~~  262 (277)
T cd06917         239 LDEEPKERLSAEELLKSKWIKAHS  262 (277)
T ss_pred             cCCCcccCcCHHHHhhChHhhccc
Confidence            999999999999999999997643


No 222
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.92  E-value=3.4e-25  Score=220.50  Aligned_cols=154  Identities=21%  Similarity=0.214  Sum_probs=115.5

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC------CCccccccCCcccChhhhcCCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR------QPLTSRVVTLWYRPPELLLGATDY   74 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~------~~~~~~~gt~~Y~APE~l~g~~~~   74 (468)
                      +.||+.||+|||+.+|+||||||+|||++.++.++|+|||++..+.....      .......||+.|+|||++.+ ..+
T Consensus       132 ~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~-~~~  210 (294)
T PHA02882        132 MKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNG-ACV  210 (294)
T ss_pred             HHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCC-CCC
Confidence            36899999999999999999999999999999999999999976542211      11223468999999999876 458


Q ss_pred             CCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHH
Q 012191           75 GPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAV  154 (468)
Q Consensus        75 s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~  154 (468)
                      +.++|||||||++|+|++|.+||.+......+....+.      +++.....               -...+...+..+.
T Consensus       211 ~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~------~~~~~~~~---------------~~~~~~~~~~~~~  269 (294)
T PHA02882        211 TRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKC------DFIKRLHE---------------GKIKIKNANKFIY  269 (294)
T ss_pred             CcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHH------HHHHHhhh---------------hhhccCCCCHHHH
Confidence            99999999999999999999999876432222111110      00000000               0011235678899


Q ss_pred             HHHHHhcCCCCCCCcCHHHHHh
Q 012191          155 NLIETLLSVEPYKRATASAALA  176 (468)
Q Consensus       155 dLL~~mL~~DP~kRpTa~e~L~  176 (468)
                      +++..|+..+|.+||+..++++
T Consensus       270 ~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        270 DFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             HHHHHHHhCCCCCCCCHHHHHH
Confidence            9999999999999999999875


No 223
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.92  E-value=4.9e-25  Score=212.43  Aligned_cols=150  Identities=35%  Similarity=0.520  Sum_probs=120.9

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      .||+.||.|||+.||+|+||+|+||+++.++.+||+|||++.......  ......++..|++||.+.....++.++|+|
T Consensus       109 ~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~  186 (258)
T cd06632         109 RQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS--FAKSFKGSPYWMAPEVIAQQGGYGLAADIW  186 (258)
T ss_pred             HHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc--cccccCCCcceeCHHHhcCCCCCCchhhhH
Confidence            689999999999999999999999999999999999999987654332  233456788999999986533478999999


Q ss_pred             eeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhc
Q 012191           82 SVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLL  161 (468)
Q Consensus        82 SLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL  161 (468)
                      ||||++|+|++|.+||...........+......+                           .....++..+.+||.+||
T Consensus       187 slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~li~~~l  239 (258)
T cd06632         187 SLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELP---------------------------PIPDHLSDEAKDFILKCL  239 (258)
T ss_pred             HHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCC---------------------------CcCCCcCHHHHHHHHHHh
Confidence            99999999999999997766544444332211000                           111346788999999999


Q ss_pred             CCCCCCCcCHHHHHhcccc
Q 012191          162 SVEPYKRATASAALASEYF  180 (468)
Q Consensus       162 ~~DP~kRpTa~e~L~Hp~F  180 (468)
                      ..||.+|||+.++|.||||
T Consensus       240 ~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         240 QRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             hcCcccCcCHHHHhcCCCC
Confidence            9999999999999999996


No 224
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.92  E-value=2e-25  Score=228.40  Aligned_cols=155  Identities=30%  Similarity=0.456  Sum_probs=136.4

Q ss_pred             HHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcceee
Q 012191            3 QLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWS   82 (468)
Q Consensus         3 QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIWS   82 (468)
                      .+++|++|||.+|||+|||||+|++++.+|-+||.|||+|+.+..+.  .....+||+.|.|||+++.. ..+.++|.|+
T Consensus       528 cv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~--KTwTFcGTpEYVAPEIILnK-GHD~avDyWa  604 (732)
T KOG0614|consen  528 CVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR--KTWTFCGTPEYVAPEIILNK-GHDRAVDYWA  604 (732)
T ss_pred             HHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCC--ceeeecCCcccccchhhhcc-CcchhhHHHH
Confidence            47899999999999999999999999999999999999999888764  44678999999999999874 4689999999


Q ss_pred             eehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhcC
Q 012191           83 VGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLS  162 (468)
Q Consensus        83 LG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL~  162 (468)
                      ||+++||||+|.|||.+.+.+..+..|++.+...                           +....++..+.+||.++..
T Consensus       605 LGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i---------------------------~~Pr~I~k~a~~Lik~LCr  657 (732)
T KOG0614|consen  605 LGILIYELLTGSPPFSGVDPMKTYNLILKGIDKI---------------------------EFPRRITKTATDLIKKLCR  657 (732)
T ss_pred             HHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhh---------------------------hcccccchhHHHHHHHHHh
Confidence            9999999999999999999999999998765322                           1113578889999999999


Q ss_pred             CCCCCCcC-----HHHHHhcccccCCCCCC
Q 012191          163 VEPYKRAT-----ASAALASEYFSTKPYAC  187 (468)
Q Consensus       163 ~DP~kRpT-----a~e~L~Hp~F~~~p~~~  187 (468)
                      .+|.+|..     +.++-.|.||....|..
T Consensus       658 ~~P~ERLG~~~~gI~DIkkH~Wf~gfdweg  687 (732)
T KOG0614|consen  658 DNPTERLGYQKGGINDIKKHRWFEGFDWEG  687 (732)
T ss_pred             cCcHhhhccccCChHHHHhhhhhhcCChhh
Confidence            99999976     89999999999877753


No 225
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.92  E-value=4.7e-25  Score=213.15  Aligned_cols=150  Identities=28%  Similarity=0.502  Sum_probs=121.9

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++|++|+||+|+|||++.++.++|+|||++....... .......+++.|+|||.+.+ ..++.++|+
T Consensus       107 ~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv  184 (256)
T cd08218         107 FVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV-ELARTCIGTPYYLSPEICEN-RPYNNKSDI  184 (256)
T ss_pred             HHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch-hhhhhccCCccccCHHHhCC-CCCCCccch
Confidence            3689999999999999999999999999999999999999987654321 11223457888999999876 457889999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|..||......+....+...  ..+                          .....++.++.+||.+|
T Consensus       185 ~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~--~~~--------------------------~~~~~~~~~~~~li~~~  236 (256)
T cd08218         185 WALGCVLYEMCTLKHAFEAGNMKNLVLKIIRG--SYP--------------------------PVSSHYSYDLRNLVSQL  236 (256)
T ss_pred             hHHHHHHHHHHcCCCCccCCCHHHHHHHHhcC--CCC--------------------------CCcccCCHHHHHHHHHH
Confidence            99999999999999999877666655555321  111                          01134678899999999


Q ss_pred             cCCCCCCCcCHHHHHhcccc
Q 012191          161 LSVEPYKRATASAALASEYF  180 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F  180 (468)
                      |+.+|.+||++.++|.||||
T Consensus       237 l~~~p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         237 FKRNPRDRPSVNSILEKNFI  256 (256)
T ss_pred             hhCChhhCcCHHHHhhCcCC
Confidence            99999999999999999998


No 226
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.92  E-value=5.5e-25  Score=218.96  Aligned_cols=157  Identities=29%  Similarity=0.516  Sum_probs=125.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||+|||+.||+|+||+|+||+++.++.++|+|||++....... .......++..|+|||.+.+ ..++.++|+
T Consensus       122 ~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv  199 (292)
T cd06657         122 CLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRKSLVGTPYWMAPELISR-LPYGPEVDI  199 (292)
T ss_pred             HHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceeccccc-ccccccccCccccCHHHhcC-CCCCchhhH
Confidence            4689999999999999999999999999999999999999886554321 12233567889999998865 457889999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||+||++|+|++|.+||.+......+..+....  +. .                       ......++..+.++|.+|
T Consensus       200 ~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~--~~-~-----------------------~~~~~~~~~~l~~li~~~  253 (292)
T cd06657         200 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL--PP-K-----------------------LKNLHKVSPSLKGFLDRL  253 (292)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhC--Cc-c-----------------------cCCcccCCHHHHHHHHHH
Confidence            999999999999999998876665554443211  00 0                       001134678899999999


Q ss_pred             cCCCCCCCcCHHHHHhcccccCCCC
Q 012191          161 LSVEPYKRATASAALASEYFSTKPY  185 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F~~~p~  185 (468)
                      |..||.+|||+.++|.||||.....
T Consensus       254 l~~~P~~R~~~~~ll~~~~~~~~~~  278 (292)
T cd06657         254 LVRDPAQRATAAELLKHPFLAKAGP  278 (292)
T ss_pred             HhCCcccCcCHHHHhcChHHhccCC
Confidence            9999999999999999999998653


No 227
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.92  E-value=5.6e-25  Score=214.59  Aligned_cols=152  Identities=32%  Similarity=0.497  Sum_probs=115.4

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECC-CCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCC-CCCCCCcc
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNN-EGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGA-TDYGPSVD   79 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~-~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~-~~~s~~sD   79 (468)
                      .||+.||+|||+.||+|+||||+||+++. .+.++|+|||++....... .......++..|+|||.+.+. ..++.++|
T Consensus       115 ~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~~D  193 (268)
T cd06624         115 KQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGIN-PCTETFTGTLQYMAPEVIDKGPRGYGAPAD  193 (268)
T ss_pred             HHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCC-CccccCCCCccccChhhhccccccCCchhh
Confidence            68999999999999999999999999976 6789999999987554321 122334578899999998653 34788999


Q ss_pred             eeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           80 LWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        80 IWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||+||++|+|++|.+||...................                          ......+++++.+||.+
T Consensus       194 v~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~li~~  247 (268)
T cd06624         194 IWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIH--------------------------PEIPESLSAEAKNFILR  247 (268)
T ss_pred             hHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccC--------------------------CCCCcccCHHHHHHHHH
Confidence            9999999999999999997543221111000000000                          00113467889999999


Q ss_pred             hcCCCCCCCcCHHHHHhcccc
Q 012191          160 LLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      ||..+|.+|||+.+++.||||
T Consensus       248 ~l~~~p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         248 CFEPDPDKRASAHDLLQDPFL  268 (268)
T ss_pred             HcCCCchhCCCHHHHHhCCCC
Confidence            999999999999999999997


No 228
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.92  E-value=4.4e-25  Score=213.53  Aligned_cols=154  Identities=29%  Similarity=0.438  Sum_probs=120.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCC--CCCCCCc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGA--TDYGPSV   78 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~--~~~s~~s   78 (468)
                      +.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++....... .......++..|+|||.+.+.  ..++.++
T Consensus       107 ~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~  185 (262)
T cd06613         107 CRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI-AKRKSFIGTPYWMAPEVAAVERKGGYDGKC  185 (262)
T ss_pred             HHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhh-hccccccCCccccCchhhcccccCCcCchh
Confidence            3689999999999999999999999999999999999999987654321 122344678899999998653  2578899


Q ss_pred             ceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           79 DLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        79 DIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |+|||||++|+|++|.+||.+.+.......+......++.                       + .....++.++.+||.
T Consensus       186 Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~-----------------------~-~~~~~~~~~~~~li~  241 (262)
T cd06613         186 DIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPK-----------------------L-KDKEKWSPVFHDFIK  241 (262)
T ss_pred             hhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCcc-----------------------c-cchhhhhHHHHHHHH
Confidence            9999999999999999999887765554443221101100                       0 001235678999999


Q ss_pred             HhcCCCCCCCcCHHHHHhccc
Q 012191          159 TLLSVEPYKRATASAALASEY  179 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~Hp~  179 (468)
                      +||..||..|||+.++|.|+|
T Consensus       242 ~~l~~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         242 KCLTKDPKKRPTATKLLQHPF  262 (262)
T ss_pred             HHcCCChhhCCCHHHHhcCCC
Confidence            999999999999999999998


No 229
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.92  E-value=7.2e-25  Score=213.48  Aligned_cols=148  Identities=20%  Similarity=0.306  Sum_probs=116.5

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||+|||++||+|+||||+|||++.++.+||+|||++................+..|+|||.+.+ ..++.++||
T Consensus       110 ~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv  188 (263)
T cd05052         110 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY-NKFSIKSDV  188 (263)
T ss_pred             HHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceeeccCCCCCccccCCHHHhcc-CCCCchhHH
Confidence            3699999999999999999999999999999999999999987655432211122233567999998876 467889999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++ |..||.+.+..+....+....  .+                          .....++..+.+||.+
T Consensus       189 ~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~--~~--------------------------~~~~~~~~~~~~li~~  240 (263)
T cd05052         189 WAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGY--RM--------------------------ERPEGCPPKVYELMRA  240 (263)
T ss_pred             HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC--CC--------------------------CCCCCCCHHHHHHHHH
Confidence            999999999998 999998876655544442211  00                          0113568899999999


Q ss_pred             hcCCCCCCCcCHHHHHhc
Q 012191          160 LLSVEPYKRATASAALAS  177 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~H  177 (468)
                      ||..||.+|||+.++++.
T Consensus       241 cl~~~p~~Rp~~~~l~~~  258 (263)
T cd05052         241 CWQWNPSDRPSFAEIHQA  258 (263)
T ss_pred             HccCCcccCCCHHHHHHH
Confidence            999999999999999863


No 230
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their 
Probab=99.92  E-value=5e-25  Score=214.17  Aligned_cols=156  Identities=31%  Similarity=0.525  Sum_probs=118.8

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCC-cEEEEecCCccccCCCCC---CCccccccCCcccChhhhcCCCCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEG-VLKLADFGLANFSNTGHR---QPLTSRVVTLWYRPPELLLGATDYGP   76 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g-~vKL~DFGla~~~~~~~~---~~~~~~~gt~~Y~APE~l~g~~~~s~   76 (468)
                      +.||+.||.|||++||+|+||+|+||+++.++ .++|+|||.+........   .......++..|+|||.+.+ ..++.
T Consensus       109 ~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~  187 (268)
T cd06630         109 TEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRG-EQYGR  187 (268)
T ss_pred             HHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccccCCccccccccccceeCHhHhcc-CCCCc
Confidence            47999999999999999999999999998776 599999999876543211   11123457889999999876 45789


Q ss_pred             CcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHH
Q 012191           77 SVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNL  156 (468)
Q Consensus        77 ~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dL  156 (468)
                      ++||||+||++|+|++|..||...........+........                        .......++.++.++
T Consensus       188 ~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~  243 (268)
T cd06630         188 SCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATT------------------------APSIPEHLSPGLRDV  243 (268)
T ss_pred             ccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCC------------------------CCCCchhhCHHHHHH
Confidence            99999999999999999999975543332222222110000                        001113467889999


Q ss_pred             HHHhcCCCCCCCcCHHHHHhccccc
Q 012191          157 IETLLSVEPYKRATASAALASEYFS  181 (468)
Q Consensus       157 L~~mL~~DP~kRpTa~e~L~Hp~F~  181 (468)
                      |.+||..||.+|||+.++|.||||+
T Consensus       244 i~~~l~~~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         244 TLRCLELQPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             HHHHcCCCcccCcCHHHHhcCcccC
Confidence            9999999999999999999999985


No 231
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.92  E-value=3.2e-25  Score=215.13  Aligned_cols=151  Identities=28%  Similarity=0.459  Sum_probs=118.4

Q ss_pred             CHHHHHHHHHHHh-CCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHS-RGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs-~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +.||+.||+|||+ .|++|+||+|+||+++.++.++|+|||.+........   ....++..|+|||.+.+ ..++.++|
T Consensus       106 ~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~---~~~~~~~~y~~PE~~~~-~~~~~~~D  181 (265)
T cd06605         106 AVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA---KTFVGTSSYMAPERIQG-NDYSVKSD  181 (265)
T ss_pred             HHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh---hcccCChhccCHHHHcC-CCCCchhh
Confidence            3689999999999 9999999999999999999999999999865533211   12567889999999876 46889999


Q ss_pred             eeeeehhhhhhhhcCCCCCCCc-----hHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHH
Q 012191           80 LWSVGCVFAELLIGKPILQGRT-----EVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAV  154 (468)
Q Consensus        80 IWSLG~ILyeLltG~~pf~g~~-----~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~  154 (468)
                      ||||||++|+|++|..||....     ..+.+..+..   ......                      ..  ..++..+.
T Consensus       182 v~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~----------------------~~--~~~~~~~~  234 (265)
T cd06605         182 IWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVN---EPPPRL----------------------PS--GKFSPDFQ  234 (265)
T ss_pred             HHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhc---CCCCCC----------------------Ch--hhcCHHHH
Confidence            9999999999999999996542     2222222211   110000                      00  11688899


Q ss_pred             HHHHHhcCCCCCCCcCHHHHHhcccccC
Q 012191          155 NLIETLLSVEPYKRATASAALASEYFST  182 (468)
Q Consensus       155 dLL~~mL~~DP~kRpTa~e~L~Hp~F~~  182 (468)
                      +||.+||..||.+|||+.++|.||||+.
T Consensus       235 ~li~~~l~~~p~~Rpt~~~ll~~~~~~~  262 (265)
T cd06605         235 DFVNLCLIKDPRERPSYKELLEHPFIKK  262 (265)
T ss_pred             HHHHHHcCCCchhCcCHHHHhhCchhhc
Confidence            9999999999999999999999999975


No 232
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with 
Probab=99.92  E-value=7.2e-25  Score=211.32  Aligned_cols=149  Identities=29%  Similarity=0.446  Sum_probs=119.9

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCC-CcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNE-GVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~-g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +.||+.||.|||++||+|+||+|+||+++.+ +.++|+|||++.......  ......++..|+|||.+.+ ..++.++|
T Consensus       107 ~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~~D  183 (256)
T cd08220         107 FVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS--KAYTVVGTPCYISPELCEG-KPYNQKSD  183 (256)
T ss_pred             HHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc--cccccccCCcccCchhccC-CCCCcccc
Confidence            3689999999999999999999999999865 468999999987664332  2223467889999999876 45788999


Q ss_pred             eeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           80 LWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        80 IWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      ||||||++|+|++|..||.+.+.......+......                            .....++..+.+||..
T Consensus       184 v~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~l~~li~~  235 (256)
T cd08220         184 IWALGCVLYELASLKRAFEAANLPALVLKIMSGTFA----------------------------PISDRYSPDLRQLILS  235 (256)
T ss_pred             hHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCC----------------------------CCCCCcCHHHHHHHHH
Confidence            999999999999999999887665555444321100                            0112467889999999


Q ss_pred             hcCCCCCCCcCHHHHHhcccc
Q 012191          160 LLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      ||..||.+|||+.++|+||||
T Consensus       236 ~l~~~p~~Rpt~~~ll~~p~~  256 (256)
T cd08220         236 MLNLDPSKRPQLSQIMAQPIC  256 (256)
T ss_pred             HccCChhhCCCHHHHhhCCCC
Confidence            999999999999999999997


No 233
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.91  E-value=3.9e-25  Score=223.26  Aligned_cols=180  Identities=24%  Similarity=0.326  Sum_probs=120.6

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC-CC-----ccccccCCcccChhhhcCC-CC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR-QP-----LTSRVVTLWYRPPELLLGA-TD   73 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~-~~-----~~~~~gt~~Y~APE~l~g~-~~   73 (468)
                      +.||+.||+|||+.||+||||||+|||++.++.++++||+.+........ ..     .....++..|+|||++.+. ..
T Consensus       107 ~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  186 (328)
T cd08226         107 LFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYG  186 (328)
T ss_pred             HHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCC
Confidence            36999999999999999999999999999999999999986532211110 00     0112345679999998753 34


Q ss_pred             CCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCcc--ccC---------------CC--
Q 012191           74 YGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHA--TLF---------------KP--  134 (468)
Q Consensus        74 ~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~--~~~---------------~~--  134 (468)
                      ++.++|||||||++|+|++|.+||.+......+..+.......+   |.....+..  ...               ..  
T Consensus       187 ~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (328)
T cd08226         187 YNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSP---LDITTFPCEESRMKNSQSGVDSGIGESVVAAGM  263 (328)
T ss_pred             CCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCC---ccccccchhhhhhccchhhhhcccccchhcccc
Confidence            78899999999999999999999988766555444433211111   100000000  000               00  


Q ss_pred             --CCCCCchhhhhcCCCcHHHHHHHHHhcCCCCCCCcCHHHHHhcccccCC
Q 012191          135 --QQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       135 --~~~~~~~l~~~~~~~s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                        .......-......++..+.+||.+||++||.+|||+.++|+||||...
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~  314 (328)
T cd08226         264 TQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQV  314 (328)
T ss_pred             ccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHH
Confidence              0000000001123467789999999999999999999999999999753


No 234
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.91  E-value=6.5e-25  Score=215.82  Aligned_cols=147  Identities=21%  Similarity=0.311  Sum_probs=117.4

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC-CCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR-QPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~-~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.||.|||++||+||||||+|||++.++.+||+|||++........ .......+++.|+|||.+.+ ..++.++||
T Consensus       131 ~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv  209 (283)
T cd05091         131 TQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMY-GKFSIDSDI  209 (283)
T ss_pred             HHHHHHHHHHHHcCccccccchhheEecCCCceEecccccccccccchheeeccCccCCccccCHHHHhc-CCCCcchhH
Confidence            5999999999999999999999999999999999999999875543221 11223345778999999875 458899999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|||++ |.+||.+....+.+..+......+                            ....++..+.+|+..
T Consensus       210 ~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~----------------------------~~~~~~~~~~~li~~  261 (283)
T cd05091         210 WSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLP----------------------------CPDDCPAWVYTLMLE  261 (283)
T ss_pred             HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCC----------------------------CCCCCCHHHHHHHHH
Confidence            999999999998 889998877766665553321100                            113578889999999


Q ss_pred             hcCCCCCCCcCHHHHHhc
Q 012191          160 LLSVEPYKRATASAALAS  177 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~H  177 (468)
                      ||+.||.+|||+.+++..
T Consensus       262 cl~~~p~~RP~~~~i~~~  279 (283)
T cd05091         262 CWNEFPSRRPRFKDIHSR  279 (283)
T ss_pred             HhCCCcccCCCHHHHHHH
Confidence            999999999999999864


No 235
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.91  E-value=1e-24  Score=217.79  Aligned_cols=151  Identities=30%  Similarity=0.476  Sum_probs=120.8

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcC--CCCCCCCc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLG--ATDYGPSV   78 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g--~~~~s~~s   78 (468)
                      +.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++......     ....++..|+|||++.+  ...++.++
T Consensus       121 ~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~s  195 (307)
T cd06607         121 CHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA-----NSFVGTPYWMAPEVILAMDEGQYDGKV  195 (307)
T ss_pred             HHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCC-----CCccCCccccCceeeeccCCCCCCccc
Confidence            368999999999999999999999999999999999999998654432     23467888999998752  34578899


Q ss_pred             ceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           79 DLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        79 DIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |||||||++|+|++|.+||.+.+.......+...  .++.                   .      ....++..+.+||.
T Consensus       196 Dv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~--~~~~-------------------~------~~~~~~~~~~~li~  248 (307)
T cd06607         196 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--DSPT-------------------L------SSNDWSDYFRNFVD  248 (307)
T ss_pred             chHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcC--CCCC-------------------C------CchhhCHHHHHHHH
Confidence            9999999999999999999877655544333210  0000                   0      00135678999999


Q ss_pred             HhcCCCCCCCcCHHHHHhcccccCC
Q 012191          159 TLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      +||..||.+|||+.+++.||||...
T Consensus       249 ~~l~~~p~~Rp~~~~il~~~~~~~~  273 (307)
T cd06607         249 SCLQKIPQDRPSSEELLKHRFVLRE  273 (307)
T ss_pred             HHhcCChhhCcCHHHHhcChhhccc
Confidence            9999999999999999999999864


No 236
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.91  E-value=9.7e-25  Score=210.98  Aligned_cols=150  Identities=30%  Similarity=0.536  Sum_probs=123.7

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.|++|+||+|+||+++.++.+||+|||++....... .......+++.|+|||.+.+. .++.++|+
T Consensus       107 ~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~-~~~~~~~~~~~y~ape~~~~~-~~~~~~Dv  184 (256)
T cd08221         107 LFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY-SMAETVVGTPYYMSPELCQGV-KYNFKSDI  184 (256)
T ss_pred             HHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccc-ccccccCCCccccCHhhcCCC-CCCCcchh
Confidence            3689999999999999999999999999999999999999987654332 123445678999999998764 47889999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|..||.+.+..+....+..  +....                          ....++..+.++|.+|
T Consensus       185 ~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~--~~~~~--------------------------~~~~~~~~~~~~i~~~  236 (256)
T cd08221         185 WALGCVLYELLTLKRTFDATNPLNLVVKIVQ--GNYTP--------------------------VVSVYSSELISLVHSL  236 (256)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc--CCCCC--------------------------CccccCHHHHHHHHHH
Confidence            9999999999999999988777666666532  11110                          0135678899999999


Q ss_pred             cCCCCCCCcCHHHHHhcccc
Q 012191          161 LSVEPYKRATASAALASEYF  180 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F  180 (468)
                      |..||.+|||+.++|.|+|+
T Consensus       237 l~~~p~~R~s~~~ll~~~~l  256 (256)
T cd08221         237 LQQDPEKRPTADEVLDQPLL  256 (256)
T ss_pred             cccCcccCCCHHHHhhCcCC
Confidence            99999999999999999986


No 237
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.91  E-value=3.4e-25  Score=232.30  Aligned_cols=150  Identities=27%  Similarity=0.413  Sum_probs=126.9

Q ss_pred             HHHHHHHHHHHhCC--CeeccCCCCceEECCC-CcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCc
Q 012191            2 NQLLHGLEHCHSRG--VLHRDIKGSNLLVNNE-GVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSV   78 (468)
Q Consensus         2 ~QLL~gL~yLHs~g--IvHrDIKp~NILld~~-g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~s   78 (468)
                      +|||.||.|||++.  |+|||||.+||||+.+ |.|||+|+|+|......   .....+|||.|||||++..  .|+..+
T Consensus       150 RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s---~aksvIGTPEFMAPEmYEE--~YnE~V  224 (632)
T KOG0584|consen  150 RQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS---HAKSVIGTPEFMAPEMYEE--NYNELV  224 (632)
T ss_pred             HHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhcc---ccceeccCccccChHHHhh--hcchhh
Confidence            79999999999996  9999999999999865 89999999999877653   3456799999999999874  799999


Q ss_pred             ceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           79 DLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        79 DIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      ||||||++++||+|+..||...+...++.+.+. -|..|..+.                         +--.+++++||+
T Consensus       225 DVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~-SGiKP~sl~-------------------------kV~dPevr~fIe  278 (632)
T KOG0584|consen  225 DVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVT-SGIKPAALS-------------------------KVKDPEVREFIE  278 (632)
T ss_pred             hhhhhhHHHHHHHhccCChhhhCCHHHHHHHHH-cCCCHHHhh-------------------------ccCCHHHHHHHH
Confidence            999999999999999999988877766655433 244433321                         123578999999


Q ss_pred             HhcCCCCCCCcCHHHHHhcccccCC
Q 012191          159 TLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      +||.. ...|+|+.|+|.||||...
T Consensus       279 kCl~~-~~~R~sa~eLL~d~Ff~~d  302 (632)
T KOG0584|consen  279 KCLAT-KSERLSAKELLKDPFFDED  302 (632)
T ss_pred             HHhcC-chhccCHHHHhhChhhccc
Confidence            99999 9999999999999999875


No 238
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.91  E-value=7.2e-25  Score=213.81  Aligned_cols=150  Identities=36%  Similarity=0.588  Sum_probs=122.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC-------------------CCccccccCCc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR-------------------QPLTSRVVTLW   61 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~-------------------~~~~~~~gt~~   61 (468)
                      +.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++........                   .......++..
T Consensus       108 ~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (280)
T cd05581         108 AAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAE  187 (280)
T ss_pred             HHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCcc
Confidence            46899999999999999999999999999999999999999876543221                   11123456889


Q ss_pred             ccChhhhcCCCCCCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCch
Q 012191           62 YRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSS  141 (468)
Q Consensus        62 Y~APE~l~g~~~~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~  141 (468)
                      |+|||.+.+ ..++.++|||||||++++|++|..||...+....+..+.......                         
T Consensus       188 ~~~Pe~~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-------------------------  241 (280)
T cd05581         188 YVSPELLNE-KPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEYSF-------------------------  241 (280)
T ss_pred             ccCHHHhCC-CCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcCCCC-------------------------
Confidence            999998876 457889999999999999999999999887665555554221111                         


Q ss_pred             hhhhcCCCcHHHHHHHHHhcCCCCCCCcCH----HHHHhcccc
Q 012191          142 LRETFKDLPTTAVNLIETLLSVEPYKRATA----SAALASEYF  180 (468)
Q Consensus       142 l~~~~~~~s~~l~dLL~~mL~~DP~kRpTa----~e~L~Hp~F  180 (468)
                          ...+++.+.+||.+||+.||.+|||+    .++|.||||
T Consensus       242 ----~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         242 ----PPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             ----CCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence                12457889999999999999999999    999999998


No 239
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.91  E-value=1.2e-24  Score=210.60  Aligned_cols=155  Identities=32%  Similarity=0.488  Sum_probs=118.5

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCC---ccccccCCcccChhhhcCCC--CCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP---LTSRVVTLWYRPPELLLGAT--DYG   75 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~---~~~~~gt~~Y~APE~l~g~~--~~s   75 (468)
                      +.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++..........   .....++..|+|||.+.+..  .++
T Consensus       105 ~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~  184 (264)
T cd06626         105 TLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHG  184 (264)
T ss_pred             HHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCC
Confidence            3689999999999999999999999999999999999999987655432211   11345688999999987633  378


Q ss_pred             CCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHH
Q 012191           76 PSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVN  155 (468)
Q Consensus        76 ~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~d  155 (468)
                      .++|||||||++|+|++|..||.+............. +..+.                        ......++..+.+
T Consensus       185 ~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~------------------------~~~~~~~~~~~~~  239 (264)
T cd06626         185 RAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA-GHKPP------------------------IPDSLQLSPEGKD  239 (264)
T ss_pred             cccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc-CCCCC------------------------CCcccccCHHHHH
Confidence            8999999999999999999999765332222211111 11100                        0011245788999


Q ss_pred             HHHHhcCCCCCCCcCHHHHHhcccc
Q 012191          156 LIETLLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       156 LL~~mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      ||.+||+.||.+|||+.+++.|||+
T Consensus       240 li~~~l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         240 FLDRCLESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             HHHHHccCCcccCCCHHHHhcCCCC
Confidence            9999999999999999999999996


No 240
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=99.91  E-value=3.7e-25  Score=215.48  Aligned_cols=154  Identities=31%  Similarity=0.432  Sum_probs=116.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcC--CCCCCCCc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLG--ATDYGPSV   78 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g--~~~~s~~s   78 (468)
                      +.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++....... .......++..|+|||.+.+  ...++.++
T Consensus       112 ~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~  190 (267)
T cd06646         112 CRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATI-AKRKSFIGTPYWMAPEVAAVEKNGGYNQLC  190 (267)
T ss_pred             HHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccc-cccCccccCccccCHhHcccccCCCCcchh
Confidence            3689999999999999999999999999999999999999987654321 12233467889999998753  23467899


Q ss_pred             ceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           79 DLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        79 DIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |+||+||++|+|++|.+||...........+......++                 .       ......++..+.+||.
T Consensus       191 Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-----------------~-------~~~~~~~~~~~~~li~  246 (267)
T cd06646         191 DIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPP-----------------K-------LKDKTKWSSTFHNFVK  246 (267)
T ss_pred             hHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCC-----------------C-------CccccccCHHHHHHHH
Confidence            999999999999999999865443322221111000000                 0       0001246788999999


Q ss_pred             HhcCCCCCCCcCHHHHHhccc
Q 012191          159 TLLSVEPYKRATASAALASEY  179 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~Hp~  179 (468)
                      +||..||.+|||++++|+|+|
T Consensus       247 ~~l~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         247 ISLTKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             HHhhCChhhCcCHHHHhcCCC
Confidence            999999999999999999987


No 241
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.91  E-value=6.1e-25  Score=246.70  Aligned_cols=153  Identities=32%  Similarity=0.498  Sum_probs=120.3

Q ss_pred             CHHHHHHHHHHHhC-------CCeeccCCCCceEECC-----------------CCcEEEEecCCccccCCCCCCCcccc
Q 012191            1 MNQLLHGLEHCHSR-------GVLHRDIKGSNLLVNN-----------------EGVLKLADFGLANFSNTGHRQPLTSR   56 (468)
Q Consensus         1 m~QLL~gL~yLHs~-------gIvHrDIKp~NILld~-----------------~g~vKL~DFGla~~~~~~~~~~~~~~   56 (468)
                      +.||+.||.|||+.       +|||+||||+||||+.                 .+.+||+|||++......  ......
T Consensus       124 a~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~--s~~~s~  201 (1021)
T PTZ00266        124 TRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIE--SMAHSC  201 (1021)
T ss_pred             HHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCcccccccc--cccccc
Confidence            36999999999995       4999999999999954                 235899999999765432  223345


Q ss_pred             ccCCcccChhhhcCC-CCCCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCC
Q 012191           57 VVTLWYRPPELLLGA-TDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQ  135 (468)
Q Consensus        57 ~gt~~Y~APE~l~g~-~~~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~  135 (468)
                      ++|+.|+|||++.+. ..++.++||||||||||+|++|..||........+..++...  +.                  
T Consensus       202 vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~--p~------------------  261 (1021)
T PTZ00266        202 VGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRG--PD------------------  261 (1021)
T ss_pred             CCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcC--CC------------------
Confidence            789999999998643 357889999999999999999999998766555444332211  10                  


Q ss_pred             CCCCchhhhhcCCCcHHHHHHHHHhcCCCCCCCcCHHHHHhcccccCC
Q 012191          136 QPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       136 ~~~~~~l~~~~~~~s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                              ..+..++.++.+||..||.++|.+|||+.++|.|+||...
T Consensus       262 --------lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i  301 (1021)
T PTZ00266        262 --------LPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV  301 (1021)
T ss_pred             --------CCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence                    0012467889999999999999999999999999999864


No 242
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core 
Probab=99.91  E-value=1.1e-24  Score=207.67  Aligned_cols=150  Identities=33%  Similarity=0.518  Sum_probs=119.9

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.+||..|++|+||+|+||+++.++.++|+|||.+........  .....++..|+|||.+.+. .++.++|+
T Consensus       104 ~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--~~~~~~~~~~~~PE~~~~~-~~~~~~Dv  180 (253)
T cd05122         104 CKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--RNTMVGTPYWMAPEVINGK-PYDYKADI  180 (253)
T ss_pred             HHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc--ccceecCCcccCHHHHcCC-CCCccccH
Confidence            36899999999999999999999999999999999999999876654321  2345678899999998764 47889999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|..||...+....+..+...  ..+...                        ....++..+.++|.+|
T Consensus       181 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~------------------------~~~~~~~~~~~~i~~~  234 (253)
T cd05122         181 WSLGITAIELAEGKPPYSELPPMKALFKIATN--GPPGLR------------------------NPEKWSDEFKDFLKKC  234 (253)
T ss_pred             HHHHHHHHHHHhCCCCCCCCchHHHHHHHHhc--CCCCcC------------------------cccccCHHHHHHHHHH
Confidence            99999999999999999877655544443221  110000                        0012478899999999


Q ss_pred             cCCCCCCCcCHHHHHhccc
Q 012191          161 LSVEPYKRATASAALASEY  179 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~  179 (468)
                      |..||.+|||+.++|.|||
T Consensus       235 l~~~p~~R~t~~~~l~~~~  253 (253)
T cd05122         235 LQKNPEKRPTAEQLLKHPF  253 (253)
T ss_pred             ccCChhhCCCHHHHhcCCC
Confidence            9999999999999999998


No 243
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.91  E-value=1.3e-24  Score=210.95  Aligned_cols=146  Identities=20%  Similarity=0.342  Sum_probs=117.4

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      .||+.||+|||+.+++|+||||+||+++.++.++|+|||++...............++..|+|||.+.+ ..++.++|||
T Consensus       110 ~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~  188 (261)
T cd05072         110 AQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINF-GSFTIKSDVW  188 (261)
T ss_pred             HHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCceeccCCCccceecCCHHHhcc-CCCChhhhhh
Confidence            589999999999999999999999999999999999999997665432222233345678999999866 4578899999


Q ss_pred             eeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           82 SVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        82 SLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||||++|+|++ |..||.+.+.......+......                            .....++.++.+||.+|
T Consensus       189 slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~li~~~  240 (261)
T cd05072         189 SFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRM----------------------------PRMENCPDELYDIMKTC  240 (261)
T ss_pred             hhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCC----------------------------CCCCCCCHHHHHHHHHH
Confidence            99999999998 99999887766665555332110                            01134678899999999


Q ss_pred             cCCCCCCCcCHHHHHh
Q 012191          161 LSVEPYKRATASAALA  176 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~  176 (468)
                      |..||.+|||++++++
T Consensus       241 l~~~p~~Rp~~~~i~~  256 (261)
T cd05072         241 WKEKAEERPTFDYLQS  256 (261)
T ss_pred             ccCCcccCcCHHHHHH
Confidence            9999999999999874


No 244
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.91  E-value=9.9e-25  Score=212.79  Aligned_cols=148  Identities=20%  Similarity=0.262  Sum_probs=116.1

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCC-ccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP-LTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~-~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +.||+.||+|||++||+|+||||+|||++.++.++|+|||++.......... .....+++.|++||.+.+ ..++.++|
T Consensus       118 ~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~D  196 (272)
T cd05075         118 MTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLAD-RVYTTKSD  196 (272)
T ss_pred             HHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccC-CCcChHHH
Confidence            3689999999999999999999999999999999999999987654322111 112234678999999876 46889999


Q ss_pred             eeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           80 LWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        80 IWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      ||||||++|+|++ |.+||.+....+....+.... .+                           .....++..+.+||.
T Consensus       197 i~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-~~---------------------------~~~~~~~~~~~~li~  248 (272)
T cd05075         197 VWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGN-RL---------------------------KQPPDCLDGLYSLMS  248 (272)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC-CC---------------------------CCCCCCCHHHHHHHH
Confidence            9999999999999 899998876655544442210 00                           001246788999999


Q ss_pred             HhcCCCCCCCcCHHHHHhc
Q 012191          159 TLLSVEPYKRATASAALAS  177 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~H  177 (468)
                      +||..||.+|||+.+++++
T Consensus       249 ~~l~~~p~~Rps~~~l~~~  267 (272)
T cd05075         249 SCWLLNPKDRPSFETLRCE  267 (272)
T ss_pred             HHcCCCcccCcCHHHHHHH
Confidence            9999999999999999864


No 245
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.91  E-value=3.3e-25  Score=249.84  Aligned_cols=152  Identities=18%  Similarity=0.254  Sum_probs=107.6

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCC-------------------cEEEEecCCccccCCCC------------
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEG-------------------VLKLADFGLANFSNTGH------------   49 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g-------------------~vKL~DFGla~~~~~~~------------   49 (468)
                      |+||+.||.|||++||+||||||+||||+..+                   .+||+|||++.......            
T Consensus        86 ~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~  165 (793)
T PLN00181         86 FRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKK  165 (793)
T ss_pred             HHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhcccc
Confidence            57999999999999999999999999996544                   45555666554221000            


Q ss_pred             ---CCCccccccCCcccChhhhcCCCCCCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCC
Q 012191           50 ---RQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKL  126 (468)
Q Consensus        50 ---~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~  126 (468)
                         .......++|++|+|||++.+ ..|+.++||||||||||||++|.+|+....  ..+..+.... .++ ..      
T Consensus       166 ~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~-~~~-~~------  234 (793)
T PLN00181        166 QPFPMKQILAMEMSWYTSPEEDNG-SSSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRV-LPP-QI------  234 (793)
T ss_pred             CCCcccccccCCCcceEChhhhcc-CCCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhh-cCh-hh------
Confidence               000112467999999999877 458999999999999999999988875322  1122221110 000 00      


Q ss_pred             CccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhcCCCCCCCcCHHHHHhcccccCC
Q 012191          127 PHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       127 ~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                                          ......+.+++.+||..||.+|||+.++|+||||...
T Consensus       235 --------------------~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~  271 (793)
T PLN00181        235 --------------------LLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP  271 (793)
T ss_pred             --------------------hhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence                                0113446789999999999999999999999999763


No 246
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.91  E-value=8.4e-25  Score=216.05  Aligned_cols=159  Identities=28%  Similarity=0.440  Sum_probs=122.1

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCC-CCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGA-TDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~-~~~s~~sDI   80 (468)
                      .||+.||.|||+.|++|+||+|+|||++.++.++|+|||++...............++..|+|||.+.+. ..++.++||
T Consensus       112 ~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv  191 (290)
T cd05613         112 GEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDW  191 (290)
T ss_pred             HHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccccccccccCCcccCChhhccCCCCCCCccccH
Confidence            5899999999999999999999999999999999999999876544332233345688999999998653 246789999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|..||...........+...+.....                  ++       ...++..+.+||.+|
T Consensus       192 ~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~------------------~~-------~~~~~~~~~~ll~~~  246 (290)
T cd05613         192 WSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP------------------PY-------PQEMSALAKDIIQRL  246 (290)
T ss_pred             HHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCC------------------CC-------CccCCHHHHHHHHHH
Confidence            99999999999999999654332222222221100000                  00       124678899999999


Q ss_pred             cCCCCCCCc-----CHHHHHhcccccCCCC
Q 012191          161 LSVEPYKRA-----TASAALASEYFSTKPY  185 (468)
Q Consensus       161 L~~DP~kRp-----Ta~e~L~Hp~F~~~p~  185 (468)
                      |..||.+|+     ++.+++.||||....|
T Consensus       247 l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~  276 (290)
T cd05613         247 LMKDPKKRLGCGPSDADEIKKHPFFQKINW  276 (290)
T ss_pred             hcCCHHHhcCCCCCCHHHHHcCcccccCCH
Confidence            999999997     8999999999988654


No 247
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.91  E-value=1.2e-24  Score=209.93  Aligned_cols=149  Identities=30%  Similarity=0.473  Sum_probs=120.8

Q ss_pred             HHHHHHHHHHH-----hCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCC
Q 012191            2 NQLLHGLEHCH-----SRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGP   76 (468)
Q Consensus         2 ~QLL~gL~yLH-----s~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~   76 (468)
                      .||+.||.|||     +.+|+|+||+|+||+++.++.+||+|||++........ ......++..|+|||.+.+ ..++.
T Consensus       112 ~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~-~~~~~~~~~~~~~pE~~~~-~~~~~  189 (265)
T cd08217         112 TQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSS-FAKTYVGTPYYMSPEQLNH-MSYDE  189 (265)
T ss_pred             HHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccCCcc-cccccccCCCccChhhhcC-CCCCc
Confidence            68999999999     89999999999999999999999999999876654321 1234568999999999876 44788


Q ss_pred             CcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHH
Q 012191           77 SVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNL  156 (468)
Q Consensus        77 ~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dL  156 (468)
                      ++|+|||||++|+|++|..||.+.+.......+...  ..+                          .....++..+.+|
T Consensus       190 ~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~--------------------------~~~~~~~~~~~~l  241 (265)
T cd08217         190 KSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEG--KFR--------------------------RIPYRYSSELNEV  241 (265)
T ss_pred             hhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcC--CCC--------------------------CCccccCHHHHHH
Confidence            999999999999999999999887644444333211  100                          0112467889999


Q ss_pred             HHHhcCCCCCCCcCHHHHHhcccc
Q 012191          157 IETLLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       157 L~~mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      |.+||..+|.+|||+.++|+|||+
T Consensus       242 ~~~~l~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         242 IKSMLNVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             HHHHccCCcccCCCHHHHhhCCCC
Confidence            999999999999999999999995


No 248
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.91  E-value=1.1e-24  Score=221.76  Aligned_cols=148  Identities=23%  Similarity=0.321  Sum_probs=115.0

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC-CccccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.||+|||++||+||||||+|||++.++.++|+|||++..+...... ......++..|+|||++.+ ..++.++||
T Consensus       180 ~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di  258 (337)
T cd05054         180 FQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIFD-KVYTTQSDV  258 (337)
T ss_pred             HHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhcC-CCCCccccH
Confidence            68999999999999999999999999999999999999999765432211 1123345678999999876 468999999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||+||+|++ |.+||.+....+.+...+.....+                           .....+++++.+|+.+
T Consensus       259 ~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~l~~~  311 (337)
T cd05054         259 WSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRM---------------------------RAPEYATPEIYSIMLD  311 (337)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCC---------------------------CCCccCCHHHHHHHHH
Confidence            999999999997 999998755444333332211000                           0012457889999999


Q ss_pred             hcCCCCCCCcCHHHHHhc
Q 012191          160 LLSVEPYKRATASAALAS  177 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~H  177 (468)
                      ||+.+|.+|||+.++++|
T Consensus       312 cl~~~p~~RPs~~ell~~  329 (337)
T cd05054         312 CWHNNPEDRPTFSELVEI  329 (337)
T ss_pred             HccCChhhCcCHHHHHHH
Confidence            999999999999999975


No 249
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.91  E-value=1.2e-24  Score=211.89  Aligned_cols=152  Identities=30%  Similarity=0.499  Sum_probs=118.5

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC--CCccccccCCcccChhhhcCCCCCCCCc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR--QPLTSRVVTLWYRPPELLLGATDYGPSV   78 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~--~~~~~~~gt~~Y~APE~l~g~~~~s~~s   78 (468)
                      +.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++........  .......++..|+|||.+.+ ..++.++
T Consensus       112 ~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~  190 (265)
T cd06652         112 TRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISG-EGYGRKA  190 (265)
T ss_pred             HHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccccccccccccCCCCccccChhhhcC-CCCCcch
Confidence            36899999999999999999999999999999999999999875432111  11233467889999999876 4578999


Q ss_pred             ceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           79 DLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        79 DIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |||||||++|+|++|..||...........+.   ..+...                        .....++..+.++|.
T Consensus       191 Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~---~~~~~~------------------------~~~~~~~~~~~~~i~  243 (265)
T cd06652         191 DIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIA---TQPTNP------------------------VLPPHVSDHCRDFLK  243 (265)
T ss_pred             hHHHHHHHHHHHhhCCCCCCccchHHHHHHHh---cCCCCC------------------------CCchhhCHHHHHHHH
Confidence            99999999999999999998765444443322   111100                        011246778999999


Q ss_pred             HhcCCCCCCCcCHHHHHhccccc
Q 012191          159 TLLSVEPYKRATASAALASEYFS  181 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~Hp~F~  181 (468)
                      +|| .+|.+|||++++++|||+.
T Consensus       244 ~~l-~~p~~Rp~~~~il~~~~~~  265 (265)
T cd06652         244 RIF-VEAKLRPSADELLRHTFVH  265 (265)
T ss_pred             HHh-cChhhCCCHHHHhcCcccC
Confidence            999 5999999999999999984


No 250
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They 
Probab=99.91  E-value=1.2e-24  Score=208.91  Aligned_cols=150  Identities=33%  Similarity=0.503  Sum_probs=121.3

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++....... .......+++.|+|||.+.+ ..++.++|+
T Consensus       109 ~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv  186 (258)
T cd08215         109 FVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV-DLAKTVVGTPYYLSPELCQN-KPYNYKSDI  186 (258)
T ss_pred             HHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCc-ceecceeeeecccChhHhcc-CCCCccccH
Confidence            3689999999999999999999999999999999999999987655432 12233467889999998876 457889999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||+|+++|+|++|..||...........+....  .+                          .....++..+.++|.+|
T Consensus       187 ~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~--~~--------------------------~~~~~~~~~~~~~i~~~  238 (258)
T cd08215         187 WSLGCVLYELCTLKHPFEGENLLELALKILKGQ--YP--------------------------PIPSQYSSELRNLVSSL  238 (258)
T ss_pred             HHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCC--CC--------------------------CCCCCCCHHHHHHHHHH
Confidence            999999999999999998776544444432211  00                          01125678899999999


Q ss_pred             cCCCCCCCcCHHHHHhcccc
Q 012191          161 LSVEPYKRATASAALASEYF  180 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F  180 (468)
                      |..+|.+|||+.++|.||||
T Consensus       239 l~~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         239 LQKDPEERPSIAQILQSPFI  258 (258)
T ss_pred             cCCChhhCcCHHHHhcCCCC
Confidence            99999999999999999997


No 251
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.91  E-value=1.8e-24  Score=217.20  Aligned_cols=152  Identities=30%  Similarity=0.457  Sum_probs=122.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcC--CCCCCCCc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLG--ATDYGPSV   78 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g--~~~~s~~s   78 (468)
                      +.||+.||.|||++||+|+||+|+||+++.++.++|+|||++.....     .....++..|+|||.+..  ...++.++
T Consensus       127 ~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~s  201 (313)
T cd06633         127 THGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP-----ANSFVGTPYWMAPEVILAMDEGQYDGKV  201 (313)
T ss_pred             HHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCC-----CCCccccccccChhhccccCCCCCCchh
Confidence            36899999999999999999999999999999999999998754322     234467889999999852  24578899


Q ss_pred             ceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           79 DLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        79 DIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |||||||++|+|++|.+||.+.+....+..+...  ..+.                         .....++..+.+||.
T Consensus       202 Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~--~~~~-------------------------~~~~~~~~~l~~li~  254 (313)
T cd06633         202 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--DSPT-------------------------LQSNEWTDSFRGFVD  254 (313)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc--CCCC-------------------------CCccccCHHHHHHHH
Confidence            9999999999999999999887766655554321  1100                         001245678999999


Q ss_pred             HhcCCCCCCCcCHHHHHhcccccCCC
Q 012191          159 TLLSVEPYKRATASAALASEYFSTKP  184 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~Hp~F~~~p  184 (468)
                      +||+.+|.+|||+.++|.||||...+
T Consensus       255 ~~l~~~P~~Rp~~~~~l~~~~~~~~~  280 (313)
T cd06633         255 YCLQKIPQERPASAELLRHDFVRRDR  280 (313)
T ss_pred             HHccCChhhCcCHHHHhcCcccCCCc
Confidence            99999999999999999999999743


No 252
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.91  E-value=1.5e-24  Score=212.31  Aligned_cols=147  Identities=22%  Similarity=0.329  Sum_probs=116.7

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC-CCccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR-QPLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~-~~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +.||+.||.|||++||+|+||||+|||++.++.++|+|||++........ .......+++.|+|||++.+ ..++.++|
T Consensus       128 ~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~D  206 (280)
T cd05049         128 AVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESD  206 (280)
T ss_pred             HHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEECCcccceecccCcceecCCCCcccceecChhhhcc-CCcchhhh
Confidence            36899999999999999999999999999999999999999865432211 11123345778999999876 45889999


Q ss_pred             eeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           80 LWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        80 IWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      ||||||++|+|++ |..||.+.+..+....+...  ...                          .....++..+.+||.
T Consensus       207 i~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~--~~~--------------------------~~~~~~~~~~~~li~  258 (280)
T cd05049         207 VWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQG--RLL--------------------------QRPRTCPSEVYDIML  258 (280)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC--CcC--------------------------CCCCCCCHHHHHHHH
Confidence            9999999999998 99999887766655554321  110                          001246788999999


Q ss_pred             HhcCCCCCCCcCHHHHHh
Q 012191          159 TLLSVEPYKRATASAALA  176 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~  176 (468)
                      +||..||.+|||+.|+++
T Consensus       259 ~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         259 GCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             HHcCCCcccCCCHHHHHH
Confidence            999999999999999985


No 253
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.91  E-value=6.4e-25  Score=243.07  Aligned_cols=153  Identities=34%  Similarity=0.545  Sum_probs=116.1

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccC-----------------CCCCCCccccccCCccc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSN-----------------TGHRQPLTSRVVTLWYR   63 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~-----------------~~~~~~~~~~~gt~~Y~   63 (468)
                      |+||++||.|+|++|||||||||.||+++.++.|||+|||+|+...                 .......+..+||.-|.
T Consensus       703 FreIlEGLaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYv  782 (1351)
T KOG1035|consen  703 FREILEGLAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYV  782 (1351)
T ss_pred             HHHHHHHHHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeee
Confidence            5899999999999999999999999999999999999999997611                 01122457789999999


Q ss_pred             ChhhhcCCC--CCCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHH-cCCCCchhhhccCCCccccCCCCCCCCc
Q 012191           64 PPELLLGAT--DYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKL-CGSPPDDYWKKSKLPHATLFKPQQPYDS  140 (468)
Q Consensus        64 APE~l~g~~--~~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~-~g~p~~~~~~~~~~~~~~~~~~~~~~~~  140 (468)
                      |||++.+..  .|+.++|+||||+||+||+.   ||..  .++-...+..+ -|..|.+                     
T Consensus       783 APEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~T--sMERa~iL~~LR~g~iP~~---------------------  836 (1351)
T KOG1035|consen  783 APELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGT--SMERASILTNLRKGSIPEP---------------------  836 (1351)
T ss_pred             cHHHhcccccccccchhhhHHHHHHHHHHhc---cCCc--hHHHHHHHHhcccCCCCCC---------------------
Confidence            999997765  69999999999999999983   4643  33322222221 1222211                     


Q ss_pred             hhhhhcCCCcHHHHHHHHHhcCCCCCCCcCHHHHHhccccc
Q 012191          141 SLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFS  181 (468)
Q Consensus       141 ~l~~~~~~~s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~  181 (468)
                        ...+..--+.-..+|++||+.||.+||||.|+|++.||-
T Consensus       837 --~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llp  875 (1351)
T KOG1035|consen  837 --ADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLP  875 (1351)
T ss_pred             --cccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence              011122234467899999999999999999999999875


No 254
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.91  E-value=1.2e-24  Score=216.01  Aligned_cols=154  Identities=25%  Similarity=0.405  Sum_probs=118.9

Q ss_pred             HHHHHHHHHHHh-CCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCC---CCCCCC
Q 012191            2 NQLLHGLEHCHS-RGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGA---TDYGPS   77 (468)
Q Consensus         2 ~QLL~gL~yLHs-~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~---~~~s~~   77 (468)
                      .||+.||+|||+ .||+|+||+|+||+++.++.++|+|||++.......  ......++..|+|||.+.+.   ..++.+
T Consensus       121 ~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~  198 (296)
T cd06618         121 VAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK--AKTRSAGCAAYMAPERIDPPDPNPKYDIR  198 (296)
T ss_pred             HHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCC--cccCCCCCccccCHhhcCCCCCccccccc
Confidence            689999999997 599999999999999999999999999987654321  12333567889999998653   247889


Q ss_pred             cceeeeehhhhhhhhcCCCCCCCch-HHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHH
Q 012191           78 VDLWSVGCVFAELLIGKPILQGRTE-VEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNL  156 (468)
Q Consensus        78 sDIWSLG~ILyeLltG~~pf~g~~~-~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dL  156 (468)
                      +|||||||++|+|++|..||..... .+.+..+....  .+.  +               +       ....++.++.+|
T Consensus       199 ~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~--~---------------~-------~~~~~~~~l~~l  252 (296)
T cd06618         199 ADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEE--PPS--L---------------P-------PNEGFSPDFCSF  252 (296)
T ss_pred             hhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCC--CCC--C---------------C-------CCCCCCHHHHHH
Confidence            9999999999999999999976332 33333332211  000  0               0       001467889999


Q ss_pred             HHHhcCCCCCCCcCHHHHHhcccccCC
Q 012191          157 IETLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       157 L~~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      |.+||..||.+|||+.+++.|+||...
T Consensus       253 i~~~l~~~p~~Rp~~~~il~~~~~~~~  279 (296)
T cd06618         253 VDLCLTKDHRKRPKYRELLQHPFIRRY  279 (296)
T ss_pred             HHHHccCChhhCCCHHHHhcChhhhcc
Confidence            999999999999999999999999864


No 255
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.91  E-value=1.5e-24  Score=210.20  Aligned_cols=149  Identities=30%  Similarity=0.448  Sum_probs=119.1

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+|+||+|+||+++.++.++|+|||++.......  ......++..|+|||.+.+ ..++.++|+
T Consensus       106 ~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~y~~PE~~~~-~~~~~~~Di  182 (258)
T cd05578         106 ICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT--LTTSTSGTPGYMAPEVLCR-QGYSVAVDW  182 (258)
T ss_pred             HHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc--cccccCCChhhcCHHHHcc-cCCCCcccc
Confidence            4689999999999999999999999999999999999999987654332  2234567889999999876 448899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCch--HHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTE--VEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~--~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |||||++|+|++|..||.....  ...+......   ..                         ......++..+.++|.
T Consensus       183 ~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~-------------------------~~~~~~~~~~~~~~i~  234 (258)
T cd05578         183 WSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET---AD-------------------------VLYPATWSTEAIDAIN  234 (258)
T ss_pred             hhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc---cc-------------------------ccCcccCcHHHHHHHH
Confidence            9999999999999999987664  2222221110   00                         0011246788999999


Q ss_pred             HhcCCCCCCCcCH--HHHHhcccc
Q 012191          159 TLLSVEPYKRATA--SAALASEYF  180 (468)
Q Consensus       159 ~mL~~DP~kRpTa--~e~L~Hp~F  180 (468)
                      +||..||.+||++  .+++.||||
T Consensus       235 ~~l~~~p~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         235 KLLERDPQKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             HHccCChhHcCCccHHHHhcCCCC
Confidence            9999999999999  999999998


No 256
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.91  E-value=1.6e-24  Score=216.83  Aligned_cols=151  Identities=29%  Similarity=0.452  Sum_probs=120.9

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcC--CCCCCCCc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLG--ATDYGPSV   78 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g--~~~~s~~s   78 (468)
                      +.||+.||.|||+.|++|+||+|+|||++.++.++|+|||++......     ....++..|+|||.+.+  ...++.++
T Consensus       121 ~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~~  195 (308)
T cd06634         121 THGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-----NXFVGTPYWMAPEVILAMDEGQYDGKV  195 (308)
T ss_pred             HHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCc-----ccccCCccccCHHHHhhcccCCCCccc
Confidence            368999999999999999999999999999999999999998755432     33467889999999853  23578899


Q ss_pred             ceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           79 DLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        79 DIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |||||||++|+|++|..||...+..+....+.... .+.                          .....++..+.+||.
T Consensus       196 Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~-~~~--------------------------~~~~~~~~~~~~li~  248 (308)
T cd06634         196 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE-SPA--------------------------LQSGHWSEYFRNFVD  248 (308)
T ss_pred             chHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcC-CCC--------------------------cCcccccHHHHHHHH
Confidence            99999999999999999997765544444332211 000                          001246788999999


Q ss_pred             HhcCCCCCCCcCHHHHHhcccccCC
Q 012191          159 TLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      +||..+|.+|||+.+++.|+||...
T Consensus       249 ~cl~~~P~~Rp~~~~ll~~~~~~~~  273 (308)
T cd06634         249 SCLQKIPQDRPTSEVLLKHRFVLRE  273 (308)
T ss_pred             HHhhCCcccCCCHHHHhhCcccccc
Confidence            9999999999999999999999873


No 257
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.91  E-value=1.2e-24  Score=213.85  Aligned_cols=155  Identities=29%  Similarity=0.476  Sum_probs=123.1

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||+|||+.+++|+||+|+||+++.++.++|+|||++....... .......++..|+|||.+.+ ..++.++|+
T Consensus       107 ~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~apE~~~~-~~~~~~~Dv  184 (277)
T cd06640         107 LKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-IKRNTFVGTPFWMAPEVIQQ-SAYDSKADI  184 (277)
T ss_pred             HHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCc-cccccccCcccccCHhHhcc-CCCccHHHH
Confidence            3689999999999999999999999999999999999999987654322 12233467889999999876 457889999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|.+||.+.+.......+..  +.++                          .....++..+.+||.+|
T Consensus       185 ~slG~il~el~tg~~p~~~~~~~~~~~~~~~--~~~~--------------------------~~~~~~~~~~~~li~~~  236 (277)
T cd06640         185 WSLGITAIELAKGEPPNSDMHPMRVLFLIPK--NNPP--------------------------TLTGEFSKPFKEFIDAC  236 (277)
T ss_pred             HHHHHHHHHHHHCCCCCCCcChHhHhhhhhc--CCCC--------------------------CCchhhhHHHHHHHHHH
Confidence            9999999999999999987665443332211  0010                          11124678899999999


Q ss_pred             cCCCCCCCcCHHHHHhcccccCCCC
Q 012191          161 LSVEPYKRATASAALASEYFSTKPY  185 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F~~~p~  185 (468)
                      |..||.+|||+.++|.|+||.....
T Consensus       237 l~~~p~~Rp~~~~il~~~~~~~~~~  261 (277)
T cd06640         237 LNKDPSFRPTAKELLKHKFIVKNAK  261 (277)
T ss_pred             cccCcccCcCHHHHHhChHhhhcch
Confidence            9999999999999999999987543


No 258
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.91  E-value=2.2e-24  Score=209.92  Aligned_cols=148  Identities=20%  Similarity=0.256  Sum_probs=116.5

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCC-ccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP-LTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~-~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +.||+.||.|||+.||+|+||||+||+++.++.+||+|||++.......... ......+..|+|||.+.+ ..++.++|
T Consensus       119 ~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~D  197 (273)
T cd05035         119 MVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLAD-RVYTSKSD  197 (273)
T ss_pred             HHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccceeeccccccccccccccCCccccCHhhccc-CCCCcccc
Confidence            3689999999999999999999999999999999999999987654332111 112234567999998865 56889999


Q ss_pred             eeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           80 LWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        80 IWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      ||||||++|||++ |.+||.+....+.+..+....  ..                          .....++..+.+||.
T Consensus       198 v~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~--~~--------------------------~~~~~~~~~~~~li~  249 (273)
T cd05035         198 VWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGN--RL--------------------------KQPEDCLDELYDLMY  249 (273)
T ss_pred             hHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC--CC--------------------------CCCcCCCHHHHHHHH
Confidence            9999999999999 899998877666554443210  00                          011346788999999


Q ss_pred             HhcCCCCCCCcCHHHHHhc
Q 012191          159 TLLSVEPYKRATASAALAS  177 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~H  177 (468)
                      +||+.||.+|||+.+++.+
T Consensus       250 ~~l~~~p~~Rp~~~e~~~~  268 (273)
T cd05035         250 SCWRADPKDRPTFTKLREV  268 (273)
T ss_pred             HHcCCChhhCcCHHHHHHH
Confidence            9999999999999999875


No 259
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.91  E-value=8.9e-25  Score=217.23  Aligned_cols=155  Identities=28%  Similarity=0.496  Sum_probs=122.6

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++|++|+||+|+||+++.++.++|+|||++........ ......+++.|++||.+.+ ..++.++|+
T Consensus       121 ~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~-~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv  198 (293)
T cd06647         121 CRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-KRSTMVGTPYWMAPEVVTR-KAYGPKVDI  198 (293)
T ss_pred             HHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc-ccccccCChhhcCchhhcc-CCCCchhhH
Confidence            46899999999999999999999999999999999999998865543321 2233467889999999876 457889999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|.+||...+....+..+.. .+.+.                         ......++..+.+||.+|
T Consensus       199 ~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~-~~~~~-------------------------~~~~~~~~~~l~~li~~~  252 (293)
T cd06647         199 WSLGIMAIEMVEGEPPYLNENPLRALYLIAT-NGTPE-------------------------LQNPEKLSAIFRDFLNRC  252 (293)
T ss_pred             HHHHHHHHHHHhCCCCCCCCChhhheeehhc-CCCCC-------------------------CCCccccCHHHHHHHHHH
Confidence            9999999999999999987665444332211 01100                         001124677899999999


Q ss_pred             cCCCCCCCcCHHHHHhcccccCC
Q 012191          161 LSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      |..||.+||++.++|.|+||...
T Consensus       253 l~~~p~~Rp~~~~il~h~~~~~~  275 (293)
T cd06647         253 LEMDVEKRGSAKELLQHPFLKIA  275 (293)
T ss_pred             ccCChhhCcCHHHHhcCHHHhcC
Confidence            99999999999999999999874


No 260
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.91  E-value=1.7e-24  Score=208.77  Aligned_cols=149  Identities=32%  Similarity=0.501  Sum_probs=119.4

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCC-cEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEG-VLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g-~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.||.|||+.+|+|+||+|+||+++.++ .++|+|||.+....... .......+++.|+|||.+.+ ..++.++|+
T Consensus       108 ~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~ape~~~~-~~~~~~~Dv  185 (257)
T cd08225         108 VQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM-ELAYTCVGTPYYLSPEICQN-RPYNNKTDI  185 (257)
T ss_pred             HHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCc-ccccccCCCccccCHHHHcC-CCCCchhhH
Confidence            5899999999999999999999999998886 46999999987654322 22233457889999998876 357889999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|..||.+.+..+....+....  .                          ....+.++.++.++|.+|
T Consensus       186 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~--~--------------------------~~~~~~~~~~~~~~i~~~  237 (257)
T cd08225         186 WSLGCVLYELCTLKHPFEGNNLHQLVLKICQGY--F--------------------------APISPNFSRDLRSLISQL  237 (257)
T ss_pred             HHHHHHHHHHHhCCCCCCCccHHHHHHHHhccc--C--------------------------CCCCCCCCHHHHHHHHHH
Confidence            999999999999999998776555444432210  0                          011135678899999999


Q ss_pred             cCCCCCCCcCHHHHHhcccc
Q 012191          161 LSVEPYKRATASAALASEYF  180 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F  180 (468)
                      |..+|.+|||+.++|.||||
T Consensus       238 l~~~p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         238 FKVSPRDRPSITSILKRPFL  257 (257)
T ss_pred             hccChhhCcCHHHHhhCCCC
Confidence            99999999999999999997


No 261
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.91  E-value=2.1e-24  Score=210.57  Aligned_cols=146  Identities=25%  Similarity=0.347  Sum_probs=116.5

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      .||+.||+|||+.||+|+||||+||+++.++.++|+|||.+...............++..|+|||.+.+ ..++.++|||
T Consensus       109 ~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dvw  187 (262)
T cd05071         109 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY-GRFTIKSDVW  187 (262)
T ss_pred             HHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeeccccccccccCCcccceecCHhHhcc-CCCCchhhHH
Confidence            689999999999999999999999999999999999999997665432222223345678999998865 4578999999


Q ss_pred             eeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           82 SVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        82 SLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||||++|+|++ |.+||.+....+.+..+..... .                           .....++..+.+||.+|
T Consensus       188 slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~-~---------------------------~~~~~~~~~l~~li~~~  239 (262)
T cd05071         188 SFGILLTELTTKGRVPYPGMVNREVLDQVERGYR-M---------------------------PCPPECPESLHDLMCQC  239 (262)
T ss_pred             HHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCC-C---------------------------CCccccCHHHHHHHHHH
Confidence            99999999999 8899988776665554432110 0                           00124678899999999


Q ss_pred             cCCCCCCCcCHHHHHh
Q 012191          161 LSVEPYKRATASAALA  176 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~  176 (468)
                      |+.||.+|||+.++++
T Consensus       240 l~~~p~~Rp~~~~~~~  255 (262)
T cd05071         240 WRKEPEERPTFEYLQA  255 (262)
T ss_pred             ccCCcccCCCHHHHHH
Confidence            9999999999999885


No 262
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.91  E-value=2.2e-24  Score=209.46  Aligned_cols=147  Identities=24%  Similarity=0.352  Sum_probs=116.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+|+||||+||+++.++.++|+|||++...............++..|+|||.+.+ ..++.++||
T Consensus       108 ~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di  186 (260)
T cd05070         108 AAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY-GRFTIKSDV  186 (260)
T ss_pred             HHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCCCCCccccChHHHhc-CCCcchhhh
Confidence            3689999999999999999999999999999999999999997654332222222334567999998865 457889999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++ |.+||.+.+..+....+.... .+                           ......+..+.+||.+
T Consensus       187 ~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~-~~---------------------------~~~~~~~~~~~~li~~  238 (260)
T cd05070         187 WSFGILLTELVTKGRVPYPGMNNREVLEQVERGY-RM---------------------------PCPQDCPISLHELMLQ  238 (260)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC-CC---------------------------CCCCcCCHHHHHHHHH
Confidence            999999999999 899998877666665553211 00                           0113467889999999


Q ss_pred             hcCCCCCCCcCHHHHHh
Q 012191          160 LLSVEPYKRATASAALA  176 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~  176 (468)
                      ||..||.+|||+.+++.
T Consensus       239 ~l~~~p~~Rpt~~~l~~  255 (260)
T cd05070         239 CWKKDPEERPTFEYLQS  255 (260)
T ss_pred             HcccCcccCcCHHHHHH
Confidence            99999999999999873


No 263
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the 
Probab=99.91  E-value=2.8e-24  Score=206.44  Aligned_cols=149  Identities=35%  Similarity=0.528  Sum_probs=121.1

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.+++|+||+|+||+++.++.++|+|||++....... .......++..|++||.+.+ ..++.++|+
T Consensus        99 ~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~~~Pe~~~~-~~~~~~~D~  176 (250)
T cd05123          99 AAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-SRTNTFCGTPEYLAPEVLLG-KGYGKAVDW  176 (250)
T ss_pred             HHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCC-CcccCCcCCccccChHHhCC-CCCCchhhH
Confidence            4689999999999999999999999999999999999999987654321 12334567888999999876 347889999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|..||...........+..  +..+                           ....++..+.+||.+|
T Consensus       177 ~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~~~~---------------------------~~~~~~~~l~~~i~~~  227 (250)
T cd05123         177 WSLGVLLYEMLTGKPPFYAEDRKEIYEKILK--DPLR---------------------------FPEFLSPEARDLISGL  227 (250)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc--CCCC---------------------------CCCCCCHHHHHHHHHH
Confidence            9999999999999999987766444444432  1110                           0123478899999999


Q ss_pred             cCCCCCCCcCH---HHHHhcccc
Q 012191          161 LSVEPYKRATA---SAALASEYF  180 (468)
Q Consensus       161 L~~DP~kRpTa---~e~L~Hp~F  180 (468)
                      |..||.+|||+   .+++.||||
T Consensus       228 l~~~p~~R~~~~~~~~l~~~~~f  250 (250)
T cd05123         228 LQKDPTKRLGSGGAEEIKAHPFF  250 (250)
T ss_pred             hcCCHhhCCCcccHHHHHhCCCC
Confidence            99999999999   999999998


No 264
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.91  E-value=1.9e-24  Score=223.27  Aligned_cols=147  Identities=23%  Similarity=0.346  Sum_probs=113.4

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCc-cccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL-TSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~-~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.||.|||++||+||||||+|||++.++.+||+|||++........... ....++..|+|||++.+ ..++.++||
T Consensus       219 ~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv  297 (374)
T cd05106         219 SQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFD-CVYTVQSDV  297 (374)
T ss_pred             HHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcC-CCCCccccH
Confidence            6899999999999999999999999999999999999999875543221111 12234567999999875 468999999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++ |..||........+..+......+.                           ....++.++.+||.+
T Consensus       298 wSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~l~~li~~  350 (374)
T cd05106         298 WSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMS---------------------------RPDFAPPEIYSIMKM  350 (374)
T ss_pred             HHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCcc---------------------------CCCCCCHHHHHHHHH
Confidence            999999999997 9999987654443333332111110                           001357889999999


Q ss_pred             hcCCCCCCCcCHHHHHh
Q 012191          160 LLSVEPYKRATASAALA  176 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~  176 (468)
                      ||+.||.+|||+.++++
T Consensus       351 cl~~dp~~RPs~~~l~~  367 (374)
T cd05106         351 CWNLEPTERPTFSQISQ  367 (374)
T ss_pred             HcCCChhhCcCHHHHHH
Confidence            99999999999999985


No 265
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 
Probab=99.91  E-value=1.3e-24  Score=213.16  Aligned_cols=153  Identities=30%  Similarity=0.463  Sum_probs=120.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+|+||+|+||+++.++.++|+|||++....... .......++..|+|||.+.+ ..++.++|+
T Consensus       107 ~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv  184 (277)
T cd06642         107 LREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-IKRNTFVGTPFWMAPEVIKQ-SAYDFKADI  184 (277)
T ss_pred             HHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcc-hhhhcccCcccccCHHHhCc-CCCchhhhH
Confidence            3689999999999999999999999999999999999999987654321 11223457889999999876 457889999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|.+||...........+..  +.++                          .....++..+.+||.+|
T Consensus       185 ~slG~il~el~tg~~p~~~~~~~~~~~~~~~--~~~~--------------------------~~~~~~~~~~~~li~~~  236 (277)
T cd06642         185 WSLGITAIELAKGEPPNSDLHPMRVLFLIPK--NSPP--------------------------TLEGQYSKPFKEFVEAC  236 (277)
T ss_pred             HHHHHHHHHHHhCCCCCcccchhhHHhhhhc--CCCC--------------------------CCCcccCHHHHHHHHHH
Confidence            9999999999999999976544333322211  0000                          01124678899999999


Q ss_pred             cCCCCCCCcCHHHHHhcccccCC
Q 012191          161 LSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      |..+|.+|||+.++|.||||...
T Consensus       237 l~~~p~~Rp~~~~il~~~~~~~~  259 (277)
T cd06642         237 LNKDPRFRPTAKELLKHKFITRY  259 (277)
T ss_pred             ccCCcccCcCHHHHHHhHHHHHH
Confidence            99999999999999999999764


No 266
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.91  E-value=2.3e-24  Score=214.79  Aligned_cols=154  Identities=19%  Similarity=0.241  Sum_probs=115.0

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCC-ccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP-LTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~-~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +.||+.||.|||+.||+|+||||+|||++.++.+||+|||++.......... .....++..|+|||++.+ ..++.++|
T Consensus       144 ~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~D  222 (304)
T cd05096         144 ALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILM-GKFTTASD  222 (304)
T ss_pred             HHHHHHHHHHHHHCCccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhc-CCCCchhh
Confidence            3689999999999999999999999999999999999999987554322111 122345778999999876 45899999


Q ss_pred             eeeeehhhhhhhh--cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHH
Q 012191           80 LWSVGCVFAELLI--GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLI  157 (468)
Q Consensus        80 IWSLG~ILyeLlt--G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL  157 (468)
                      ||||||++|+|++  +..||.+.+..+.+..+...........+                     ......++..+.+||
T Consensus       223 v~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~li  281 (304)
T cd05096         223 VWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVY---------------------LFRPPPCPQGLYELM  281 (304)
T ss_pred             hHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhcccccc---------------------ccCCCCCCHHHHHHH
Confidence            9999999999986  56788776665555444332111100000                     001134678899999


Q ss_pred             HHhcCCCCCCCcCHHHHHh
Q 012191          158 ETLLSVEPYKRATASAALA  176 (468)
Q Consensus       158 ~~mL~~DP~kRpTa~e~L~  176 (468)
                      .+||..||.+|||+.++..
T Consensus       282 ~~cl~~~p~~RPs~~~i~~  300 (304)
T cd05096         282 LQCWSRDCRERPSFSDIHA  300 (304)
T ss_pred             HHHccCCchhCcCHHHHHH
Confidence            9999999999999999953


No 267
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, 
Probab=99.91  E-value=3.9e-24  Score=211.33  Aligned_cols=148  Identities=24%  Similarity=0.339  Sum_probs=115.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC-CccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +.||+.||.|||+.||+|+||||+|||++.++.+||+|||++......... ......++..|+|||++.+ ..++.++|
T Consensus       138 ~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~D  216 (293)
T cd05053         138 AYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFD-RVYTHQSD  216 (293)
T ss_pred             HHHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhcc-CCcCcccc
Confidence            368999999999999999999999999999999999999998765432211 1122234567999998865 46889999


Q ss_pred             eeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           80 LWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        80 IWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      ||||||++|+|++ |..||.+....+....+..... +                           .....++..+.+||.
T Consensus       217 i~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~-~---------------------------~~~~~~~~~~~~li~  268 (293)
T cd05053         217 VWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYR-M---------------------------EKPQNCTQELYHLMR  268 (293)
T ss_pred             eeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCCc-C---------------------------CCCCCCCHHHHHHHH
Confidence            9999999999997 9999987766555444322110 0                           001245788999999


Q ss_pred             HhcCCCCCCCcCHHHHHhc
Q 012191          159 TLLSVEPYKRATASAALAS  177 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~H  177 (468)
                      +||..||.+|||+.++|++
T Consensus       269 ~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         269 DCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             HHcccCcccCcCHHHHHHH
Confidence            9999999999999999975


No 268
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.91  E-value=2.4e-24  Score=212.39  Aligned_cols=155  Identities=32%  Similarity=0.550  Sum_probs=122.7

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++....... .......++..|++||.+.+ ..++.++|+
T Consensus       122 ~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv  199 (286)
T cd06614         122 CREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK-SKRNSVVGTPYWMAPEVIKR-KDYGPKVDI  199 (286)
T ss_pred             HHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccch-hhhccccCCcccCCHhHhcC-CCCCCcccc
Confidence            3689999999999999999999999999999999999999886544321 11223356788999999876 457899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||||||+|+|++|..||...........+... +.+.                         ......++..+.+||.+|
T Consensus       200 ~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~-------------------------~~~~~~~~~~l~~li~~~  253 (286)
T cd06614         200 WSLGIMCIEMAEGEPPYLREPPLRALFLITTK-GIPP-------------------------LKNPEKWSPEFKDFLNKC  253 (286)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc-CCCC-------------------------CcchhhCCHHHHHHHHHH
Confidence            99999999999999999876665544443221 1100                         000123678899999999


Q ss_pred             cCCCCCCCcCHHHHHhcccccCC
Q 012191          161 LSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      |+.+|.+|||+.++|.|+||...
T Consensus       254 l~~~p~~Rpt~~~il~~~~~~~~  276 (286)
T cd06614         254 LVKDPEKRPSAEELLQHPFLKKA  276 (286)
T ss_pred             hccChhhCcCHHHHhhChHhhcc
Confidence            99999999999999999999973


No 269
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.91  E-value=1.9e-24  Score=209.01  Aligned_cols=152  Identities=31%  Similarity=0.512  Sum_probs=121.1

Q ss_pred             CHHHHHHHHHHHh-CCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHS-RGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs-~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +.||+.||.|||+ .|++|+||+|+||+++.++.++|+|||++........ ......++..|+|||.+.+ ..++.++|
T Consensus       105 ~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~-~~~~~~~~~~y~~pE~~~~-~~~~~~~D  182 (264)
T cd06623         105 ARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD-QCNTFVGTVTYMSPERIQG-ESYSYAAD  182 (264)
T ss_pred             HHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCC-cccceeecccccCHhhhCC-CCCCchhh
Confidence            4689999999999 9999999999999999999999999999876643321 2224467889999999876 46888999


Q ss_pred             eeeeehhhhhhhhcCCCCCCCc---hHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCC-CcHHHHH
Q 012191           80 LWSVGCVFAELLIGKPILQGRT---EVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKD-LPTTAVN  155 (468)
Q Consensus        80 IWSLG~ILyeLltG~~pf~g~~---~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~s~~l~d  155 (468)
                      +|||||++|+|++|.+||....   ..+....+..   ....                         ..... ++..+.+
T Consensus       183 v~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~---~~~~-------------------------~~~~~~~~~~l~~  234 (264)
T cd06623         183 IWSLGLTLLECALGKFPFLPPGQPSFFELMQAICD---GPPP-------------------------SLPAEEFSPEFRD  234 (264)
T ss_pred             HHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhc---CCCC-------------------------CCCcccCCHHHHH
Confidence            9999999999999999997764   2222322221   1100                         00123 7889999


Q ss_pred             HHHHhcCCCCCCCcCHHHHHhcccccC
Q 012191          156 LIETLLSVEPYKRATASAALASEYFST  182 (468)
Q Consensus       156 LL~~mL~~DP~kRpTa~e~L~Hp~F~~  182 (468)
                      +|..||..+|.+|||+.++|+||||+.
T Consensus       235 li~~~l~~~p~~R~~~~~ll~~~~~~~  261 (264)
T cd06623         235 FISACLQKDPKKRPSAAELLQHPFIKK  261 (264)
T ss_pred             HHHHHccCChhhCCCHHHHHhCHHHHh
Confidence            999999999999999999999999975


No 270
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs),  (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast 
Probab=99.91  E-value=2.8e-24  Score=206.40  Aligned_cols=150  Identities=31%  Similarity=0.509  Sum_probs=121.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++........ ......++..|+|||.+.+. .++.++||
T Consensus       105 ~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~y~~pe~~~~~-~~~~~~Dv  182 (254)
T cd06627         105 VYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK-DDASVVGTPYWMAPEVIEMS-GASTASDI  182 (254)
T ss_pred             HHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcc-cccccccchhhcCHhhhcCC-CCCcchhH
Confidence            46899999999999999999999999999999999999999976654322 12334678899999998764 47899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |++|+++|+|++|..||...........+..  ...                          ......++..+.++|.+|
T Consensus       183 ~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~--~~~--------------------------~~~~~~~~~~~~~~i~~~  234 (254)
T cd06627         183 WSLGCTVIELLTGNPPYYDLNPMAALFRIVQ--DDH--------------------------PPLPEGISPELKDFLMQC  234 (254)
T ss_pred             HHHHHHHHHHHhCCCCCCCccHHHHHHHHhc--cCC--------------------------CCCCCCCCHHHHHHHHHH
Confidence            9999999999999999987665544444321  000                          001134678899999999


Q ss_pred             cCCCCCCCcCHHHHHhcccc
Q 012191          161 LSVEPYKRATASAALASEYF  180 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F  180 (468)
                      |..+|++|||+.++|.||||
T Consensus       235 l~~~p~~R~~~~~~l~~~~~  254 (254)
T cd06627         235 FQKDPNLRPTAKQLLKHPWI  254 (254)
T ss_pred             HhCChhhCcCHHHHhcCCCC
Confidence            99999999999999999998


No 271
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.91  E-value=3.1e-24  Score=207.58  Aligned_cols=147  Identities=29%  Similarity=0.474  Sum_probs=118.0

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+|+||||+||+++.++.++|+|||++....... .......+++.|+|||++.+ ..++.++|+
T Consensus       106 ~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv  183 (255)
T cd08219         106 FVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG-AYACTYVGTPYYVPPEIWEN-MPYNNKSDI  183 (255)
T ss_pred             HHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecccc-cccccccCCccccCHHHHcc-CCcCchhhh
Confidence            3689999999999999999999999999999999999999987654321 12234567889999999876 458899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|..||...+.......+......+                            ....++..+.+||.+|
T Consensus       184 ~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~li~~~  235 (255)
T cd08219         184 WSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKP----------------------------LPSHYSYELRSLIKQM  235 (255)
T ss_pred             hhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCC----------------------------CCcccCHHHHHHHHHH
Confidence            999999999999999998876655544443211100                            0124677899999999


Q ss_pred             cCCCCCCCcCHHHHHhc
Q 012191          161 LSVEPYKRATASAALAS  177 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~H  177 (468)
                      |+.||.+|||+.++|.-
T Consensus       236 l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         236 FKRNPRSRPSATTILSR  252 (255)
T ss_pred             HhCCcccCCCHHHHhhc
Confidence            99999999999999864


No 272
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.91  E-value=3e-24  Score=212.32  Aligned_cols=154  Identities=19%  Similarity=0.312  Sum_probs=119.6

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC-CccccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.||.|||++||+|+||||+|||++.++.++|+|||++......... ......++..|+|||.+.+ ..++.++||
T Consensus       126 ~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv  204 (288)
T cd05061         126 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD-GVFTTSSDM  204 (288)
T ss_pred             HHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcCCccccccccccccccCCCcccccccCHHHhcc-CCCChHhHH
Confidence            58999999999999999999999999999999999999998754322111 1122244677999999876 457899999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++ |.+||.+....+....+... +.+                           .....++..+.+||.+
T Consensus       205 wslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~-~~~---------------------------~~~~~~~~~~~~li~~  256 (288)
T cd05061         205 WSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDG-GYL---------------------------DQPDNCPERVTDLMRM  256 (288)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC-CCC---------------------------CCCCCCCHHHHHHHHH
Confidence            999999999998 78899877665544444221 000                           0012457889999999


Q ss_pred             hcCCCCCCCcCHHHHHh------cccccCCC
Q 012191          160 LLSVEPYKRATASAALA------SEYFSTKP  184 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~------Hp~F~~~p  184 (468)
                      ||+.||.+|||+.++++      ||||....
T Consensus       257 ~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~~  287 (288)
T cd05061         257 CWQFNPKMRPTFLEIVNLLKDDLHPSFPEVS  287 (288)
T ss_pred             HcCCChhHCcCHHHHHHHHHhhcCCCCCCCC
Confidence            99999999999999987      88887643


No 273
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.91  E-value=2.5e-24  Score=208.86  Aligned_cols=147  Identities=22%  Similarity=0.355  Sum_probs=115.8

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      .||+.||.|||+.||+|+||||+||+++.++.+||+|||++...............++..|+|||.+.+ ..++.++|||
T Consensus       107 ~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~-~~~~~~~Di~  185 (256)
T cd05059         107 SDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDY-SRFSSKSDVW  185 (256)
T ss_pred             HHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccccccCCCCCCccccCHHHhcc-CCCCchhhHH
Confidence            689999999999999999999999999999999999999987654322111112223457999999876 4688999999


Q ss_pred             eeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           82 SVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        82 SLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||||++|+|++ |.+||.+.+..+....+......                            .....++..+.+|+.+|
T Consensus       186 slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~li~~c  237 (256)
T cd05059         186 SFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRL----------------------------YRPKLAPTEVYTIMYSC  237 (256)
T ss_pred             HHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcC----------------------------CCCCCCCHHHHHHHHHH
Confidence            99999999998 89999887766655544321100                            00124688899999999


Q ss_pred             cCCCCCCCcCHHHHHhc
Q 012191          161 LSVEPYKRATASAALAS  177 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~H  177 (468)
                      |..+|.+|||+.++++.
T Consensus       238 l~~~p~~Rpt~~~~l~~  254 (256)
T cd05059         238 WHEKPEDRPAFKKLLSQ  254 (256)
T ss_pred             hcCChhhCcCHHHHHHH
Confidence            99999999999999864


No 274
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.91  E-value=3.8e-24  Score=205.81  Aligned_cols=148  Identities=24%  Similarity=0.340  Sum_probs=119.2

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC-CCccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR-QPLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~-~~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +.||+.||.|||++||+|+||+|+||+++.++.++|+|||.+........ .......++..|+|||.+.+. .++.++|
T Consensus       111 ~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~D  189 (262)
T cd00192         111 AIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDG-IFTSKSD  189 (262)
T ss_pred             HHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccccccccccCCCcCccccCHHHhccC-Ccchhhc
Confidence            46899999999999999999999999999999999999999976654321 112344568889999998764 6889999


Q ss_pred             eeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           80 LWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        80 IWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      ||||||++|+|++ |..||.+....+....+...  ...                          .....++.++.++|.
T Consensus       190 i~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~--~~~--------------------------~~~~~~~~~~~~li~  241 (262)
T cd00192         190 VWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKG--YRL--------------------------PKPEYCPDELYELML  241 (262)
T ss_pred             cHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC--CCC--------------------------CCCccCChHHHHHHH
Confidence            9999999999999 69999888766655555331  000                          011245889999999


Q ss_pred             HhcCCCCCCCcCHHHHHhc
Q 012191          159 TLLSVEPYKRATASAALAS  177 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~H  177 (468)
                      +||..||.+|||+.+++.+
T Consensus       242 ~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         242 SCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             HHccCCcccCcCHHHHHHh
Confidence            9999999999999999975


No 275
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.91  E-value=3e-24  Score=208.76  Aligned_cols=146  Identities=23%  Similarity=0.361  Sum_probs=117.1

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      .||+.||.|||+.||+|+||||+||+++.++.++|+|||++...............++..|+|||.+.+ ..++.++|||
T Consensus       109 ~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~-~~~~~~~Di~  187 (260)
T cd05069         109 AQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALY-GRFTIKSDVW  187 (260)
T ss_pred             HHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCCccchhhCCHHHhcc-CCcChHHHHH
Confidence            689999999999999999999999999999999999999997654332222223345678999998875 4578899999


Q ss_pred             eeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           82 SVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        82 SLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||||++|+|++ |..||.+....+....+.... .+                           .....++..+.+||.+|
T Consensus       188 slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~---------------------------~~~~~~~~~~~~li~~~  239 (260)
T cd05069         188 SFGILLTELVTKGRVPYPGMVNREVLEQVERGY-RM---------------------------PCPQGCPESLHELMKLC  239 (260)
T ss_pred             HHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CC---------------------------CCCcccCHHHHHHHHHH
Confidence            99999999999 999998877766665543211 00                           01124678899999999


Q ss_pred             cCCCCCCCcCHHHHHh
Q 012191          161 LSVEPYKRATASAALA  176 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~  176 (468)
                      |..||.+|||+.++++
T Consensus       240 l~~~p~~Rp~~~~i~~  255 (260)
T cd05069         240 WKKDPDERPTFEYIQS  255 (260)
T ss_pred             ccCCcccCcCHHHHHH
Confidence            9999999999999885


No 276
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.91  E-value=2.7e-24  Score=208.33  Aligned_cols=146  Identities=23%  Similarity=0.366  Sum_probs=116.4

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      .||+.||.|||++||+|+||||+||+++.++.++|+|||++...............++..|+|||.+.+ ..++.++|||
T Consensus       107 ~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~  185 (256)
T cd05114         107 QDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNF-SKYSSKSDVW  185 (256)
T ss_pred             HHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCCCchhhCChhhccc-CccchhhhhH
Confidence            689999999999999999999999999999999999999987554322212222344567999999875 4688999999


Q ss_pred             eeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           82 SVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        82 SLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||||++|+|++ |.+||...+..+.+..+........                            ....+..+.+||.+|
T Consensus       186 s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~----------------------------~~~~~~~~~~li~~c  237 (256)
T cd05114         186 SFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYR----------------------------PKLASMTVYEVMYSC  237 (256)
T ss_pred             HHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCC----------------------------CCCCCHHHHHHHHHH
Confidence            99999999999 9999988877776666643211000                            012467899999999


Q ss_pred             cCCCCCCCcCHHHHHh
Q 012191          161 LSVEPYKRATASAALA  176 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~  176 (468)
                      |..||.+|||+.++++
T Consensus       238 ~~~~p~~Rps~~~l~~  253 (256)
T cd05114         238 WHEKPEGRPTFAELLR  253 (256)
T ss_pred             ccCCcccCcCHHHHHH
Confidence            9999999999999985


No 277
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.91  E-value=2.6e-24  Score=213.08  Aligned_cols=147  Identities=20%  Similarity=0.314  Sum_probs=116.0

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC-CCccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR-QPLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~-~~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +.||+.||+|||++||+|+||||+|||++.++.++|+|||++........ .......++..|+|||.+.+ ..++.++|
T Consensus       129 ~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~D  207 (291)
T cd05094         129 ASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESD  207 (291)
T ss_pred             HHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhcc-CCCCchhh
Confidence            36899999999999999999999999999999999999999875443221 11223445788999999876 45888999


Q ss_pred             eeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           80 LWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        80 IWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      ||||||++|+|++ |.+||......+.+..+...  ..+                          .....++..+.+||.
T Consensus       208 i~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~--~~~--------------------------~~~~~~~~~~~~li~  259 (291)
T cd05094         208 VWSFGVILWEIFTYGKQPWFQLSNTEVIECITQG--RVL--------------------------ERPRVCPKEVYDIML  259 (291)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCC--CCC--------------------------CCCccCCHHHHHHHH
Confidence            9999999999998 99999877665555443221  110                          001236788999999


Q ss_pred             HhcCCCCCCCcCHHHHHh
Q 012191          159 TLLSVEPYKRATASAALA  176 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~  176 (468)
                      +||+.||.+|||+.++++
T Consensus       260 ~~l~~~P~~Rpt~~~v~~  277 (291)
T cd05094         260 GCWQREPQQRLNIKEIYK  277 (291)
T ss_pred             HHcccChhhCcCHHHHHH
Confidence            999999999999999985


No 278
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly 
Probab=99.91  E-value=3e-24  Score=212.37  Aligned_cols=147  Identities=21%  Similarity=0.306  Sum_probs=116.1

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC-CccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +.||+.||+|||++||+||||||+|||++.++.++|+|||++......... ......++..|+|||.+.+ ..++.++|
T Consensus       126 ~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sD  204 (288)
T cd05093         126 AQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMY-RKFTTESD  204 (288)
T ss_pred             HHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhcc-CCCCchhh
Confidence            368999999999999999999999999999999999999998755332111 1122344678999999876 46889999


Q ss_pred             eeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           80 LWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        80 IWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      ||||||++|+|++ |.+||.+....+.+..+...  ...                          .....++.++.+||.
T Consensus       205 iwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~--~~~--------------------------~~~~~~~~~l~~li~  256 (288)
T cd05093         205 VWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQG--RVL--------------------------QRPRTCPKEVYDLML  256 (288)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC--CcC--------------------------CCCCCCCHHHHHHHH
Confidence            9999999999998 99999887766655555331  110                          001246788999999


Q ss_pred             HhcCCCCCCCcCHHHHHh
Q 012191          159 TLLSVEPYKRATASAALA  176 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~  176 (468)
                      +||+.||.+|||+.+++.
T Consensus       257 ~~l~~~p~~Rpt~~~v~~  274 (288)
T cd05093         257 GCWQREPHMRLNIKEIHS  274 (288)
T ss_pred             HHccCChhhCCCHHHHHH
Confidence            999999999999999864


No 279
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds 
Probab=99.91  E-value=2.7e-24  Score=209.10  Aligned_cols=148  Identities=21%  Similarity=0.348  Sum_probs=116.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.||+|+||||+|||++.++.+||+|||++...............++..|+|||.+.+ ..++.++||
T Consensus       106 ~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~-~~~~~~~Di  184 (256)
T cd05113         106 CKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLY-SKFSSKSDV  184 (256)
T ss_pred             HHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCCccChhhCCHHHHhc-CcccchhHH
Confidence            4689999999999999999999999999999999999999987554332111122334677999999876 458889999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++ |..||......+....+......+                            .....+..+.+||.+
T Consensus       185 ~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~li~~  236 (256)
T cd05113         185 WAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLY----------------------------RPHLASEKVYAIMYS  236 (256)
T ss_pred             HHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCC----------------------------CCCCCCHHHHHHHHH
Confidence            999999999998 999998777665555543311100                            001357889999999


Q ss_pred             hcCCCCCCCcCHHHHHhc
Q 012191          160 LLSVEPYKRATASAALAS  177 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~H  177 (468)
                      ||..||.+|||+.++|.+
T Consensus       237 cl~~~p~~Rp~~~~ll~~  254 (256)
T cd05113         237 CWHEKAEERPTFQQLLSS  254 (256)
T ss_pred             HcCCCcccCCCHHHHHHh
Confidence            999999999999999864


No 280
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.91  E-value=4.4e-24  Score=214.60  Aligned_cols=151  Identities=30%  Similarity=0.443  Sum_probs=121.9

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcC--CCCCCCCc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLG--ATDYGPSV   78 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g--~~~~s~~s   78 (468)
                      +.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++.....     .....++..|+|||.+.+  ...++.++
T Consensus       131 ~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~~  205 (317)
T cd06635         131 THGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP-----ANSFVGTPYWMAPEVILAMDEGQYDGKV  205 (317)
T ss_pred             HHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCC-----cccccCCccccChhhhhcCCCCCCCccc
Confidence            36899999999999999999999999999999999999998865432     233467889999999752  24578899


Q ss_pred             ceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           79 DLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        79 DIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |||||||++|+|++|.+||.+......+..+......+.                           ....++..+.+||.
T Consensus       206 Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~l~~li~  258 (317)
T cd06635         206 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTL---------------------------QSNEWSDYFRNFVD  258 (317)
T ss_pred             cHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCC---------------------------CCccccHHHHHHHH
Confidence            999999999999999999987766655555543211110                           01245678999999


Q ss_pred             HhcCCCCCCCcCHHHHHhcccccCC
Q 012191          159 TLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      +||+.+|.+|||+.+++.|+|+...
T Consensus       259 ~~l~~~p~~Rpt~~~il~~~~~~~~  283 (317)
T cd06635         259 SCLQKIPQDRPTSEELLKHMFVLRE  283 (317)
T ss_pred             HHccCCcccCcCHHHHHhChhhhcc
Confidence            9999999999999999999999653


No 281
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.91  E-value=2.6e-24  Score=211.10  Aligned_cols=147  Identities=18%  Similarity=0.288  Sum_probs=115.1

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC-CccccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.||.|||+.|++|+||||+|||++.++.++|+|||++......... ......++..|+|||.+.+ ..++.++||
T Consensus       126 ~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di  204 (277)
T cd05062         126 GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKD-GVFTTYSDV  204 (277)
T ss_pred             HHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhc-CCcCchhHH
Confidence            58999999999999999999999999999999999999998654322111 1112344678999999876 458899999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++ |..||.+.+..+.+..+.... .+                           .....++..+.+||.+
T Consensus       205 ~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~-~~---------------------------~~~~~~~~~~~~li~~  256 (277)
T cd05062         205 WSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGG-LL---------------------------DKPDNCPDMLFELMRM  256 (277)
T ss_pred             HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC-cC---------------------------CCCCCCCHHHHHHHHH
Confidence            999999999998 789998877655554442211 00                           0012467889999999


Q ss_pred             hcCCCCCCCcCHHHHHhc
Q 012191          160 LLSVEPYKRATASAALAS  177 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~H  177 (468)
                      ||+.||.+|||+.+++.+
T Consensus       257 ~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         257 CWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             HcCCChhhCcCHHHHHHH
Confidence            999999999999999864


No 282
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.91  E-value=3.3e-24  Score=213.13  Aligned_cols=146  Identities=22%  Similarity=0.288  Sum_probs=113.7

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||+|||++||+|+||||+|||++.++.+||+|||++......  ........+..|+|||.+.+ ..++.++||
T Consensus       125 ~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv  201 (297)
T cd05089         125 ASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVY--VKKTMGRLPVRWMAIESLNY-SVYTTKSDV  201 (297)
T ss_pred             HHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcCCCccccce--eccCCCCcCccccCchhhcc-CCCCchhhH
Confidence            368999999999999999999999999999999999999998532211  01111222456999998876 458899999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++ |..||.+....+....+......                            .....++..+.+||.+
T Consensus       202 wSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~li~~  253 (297)
T cd05089         202 WSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRM----------------------------EKPRNCDDEVYELMRQ  253 (297)
T ss_pred             HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCC----------------------------CCCCCCCHHHHHHHHH
Confidence            999999999997 99999887766655544221100                            0112477889999999


Q ss_pred             hcCCCCCCCcCHHHHHhc
Q 012191          160 LLSVEPYKRATASAALAS  177 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~H  177 (468)
                      ||..||.+|||++++++.
T Consensus       254 ~l~~~p~~Rp~~~~i~~~  271 (297)
T cd05089         254 CWRDRPYERPPFAQISVQ  271 (297)
T ss_pred             HcCCChhhCcCHHHHHHH
Confidence            999999999999999764


No 283
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.91  E-value=2.9e-24  Score=211.94  Aligned_cols=158  Identities=29%  Similarity=0.429  Sum_probs=119.2

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCC-CCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGAT-DYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~-~~s~~sDI   80 (468)
                      .||+.||.|||+.|++|+||+|.||+++.++.++|+|||++...............++..|++||.+.+.. .++.++||
T Consensus       112 ~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv  191 (288)
T cd05583         112 AEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDW  191 (288)
T ss_pred             HHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhh
Confidence            59999999999999999999999999999999999999998765433222222345788999999986532 36789999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHH-cCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKL-CGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~-~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++|..||...........+... +...+                          .....++..+.+||.+
T Consensus       192 ~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~l~~li~~  245 (288)
T cd05583         192 WSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKP--------------------------PFPKTMSAEARDFIQK  245 (288)
T ss_pred             HHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCC--------------------------CCCcccCHHHHHHHHH
Confidence            99999999999999999643322111111111 00000                          0012467889999999


Q ss_pred             hcCCCCCCCcC---HHHHHhcccccCCCC
Q 012191          160 LLSVEPYKRAT---ASAALASEYFSTKPY  185 (468)
Q Consensus       160 mL~~DP~kRpT---a~e~L~Hp~F~~~p~  185 (468)
                      ||+.||++|||   +.++|+||||+...|
T Consensus       246 ~l~~~p~~R~t~~~~~~~l~~~~~~~~~~  274 (288)
T cd05583         246 LLEKDPKKRLGANGADEIKNHPFFQGIDW  274 (288)
T ss_pred             HhcCCHhhccCcchHHHHhcCcccccCCH
Confidence            99999999998   567899999988655


No 284
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.91  E-value=3.9e-24  Score=207.80  Aligned_cols=147  Identities=22%  Similarity=0.359  Sum_probs=116.1

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.||+|+||||+||+++.++.++|+|||++................+..|+|||.+.+ ..++.++||
T Consensus       109 ~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di  187 (261)
T cd05068         109 AAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALY-NRFSIKSDV  187 (261)
T ss_pred             HHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCCcCceeccCcccccc-CCCCchhhH
Confidence            3689999999999999999999999999999999999999997665322111112223457999998876 458899999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++ |..||.+.+....+..+......+                            ....++..+.+||.+
T Consensus       188 ~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~li~~  239 (261)
T cd05068         188 WSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMP----------------------------CPPGCPKELYDIMLD  239 (261)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC----------------------------CCCcCCHHHHHHHHH
Confidence            999999999999 999998877766665553321100                            012467889999999


Q ss_pred             hcCCCCCCCcCHHHHHh
Q 012191          160 LLSVEPYKRATASAALA  176 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~  176 (468)
                      ||+.||.+||++.+++.
T Consensus       240 ~l~~~P~~Rp~~~~l~~  256 (261)
T cd05068         240 CWKEDPDDRPTFETLQW  256 (261)
T ss_pred             HhhcCcccCCCHHHHHH
Confidence            99999999999999875


No 285
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include 
Probab=99.90  E-value=3.2e-24  Score=212.01  Aligned_cols=156  Identities=26%  Similarity=0.411  Sum_probs=117.6

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++.......   .....++..|+|||.+.+ ..++.++||
T Consensus       111 ~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~---~~~~~~~~~y~~pE~~~~-~~~~~~~Dv  186 (287)
T cd06621         111 AESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL---AGTFTGTSFYMAPERIQG-KPYSITSDV  186 (287)
T ss_pred             HHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccccccc---cccccCCccccCHHHhcC-CCCCchhhH
Confidence            3689999999999999999999999999999999999999986544321   123456888999999876 468899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCc-----hHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRT-----EVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVN  155 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~-----~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~d  155 (468)
                      |||||++|+|++|..||....     ..+....+..   ......                  ... ...-..+++.+.+
T Consensus       187 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~------------------~~~-~~~~~~~~~~~~~  244 (287)
T cd06621         187 WSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVN---MPNPEL------------------KDE-PGNGIKWSEEFKD  244 (287)
T ss_pred             HHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhc---CCchhh------------------ccC-CCCCCchHHHHHH
Confidence            999999999999999997652     1222222111   000000                  000 0000134678999


Q ss_pred             HHHHhcCCCCCCCcCHHHHHhcccccC
Q 012191          156 LIETLLSVEPYKRATASAALASEYFST  182 (468)
Q Consensus       156 LL~~mL~~DP~kRpTa~e~L~Hp~F~~  182 (468)
                      ||.+||..||.+|||+.+++.||||..
T Consensus       245 li~~~l~~~p~~Rpt~~eil~~~~~~~  271 (287)
T cd06621         245 FIKQCLEKDPTRRPTPWDMLEHPWIKA  271 (287)
T ss_pred             HHHHHcCCCcccCCCHHHHHhCccccc
Confidence            999999999999999999999999965


No 286
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.90  E-value=7.7e-25  Score=210.89  Aligned_cols=142  Identities=23%  Similarity=0.398  Sum_probs=111.6

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+|+||||+||+++.++.++|+|||.+......    .....++..|+|||.+.+ ..++.++|+
T Consensus        91 ~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----~~~~~~~~~y~aPE~~~~-~~~~~~~Dv  165 (237)
T cd05576          91 AAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----CDGEAVENMYCAPEVGGI-SEETEACDW  165 (237)
T ss_pred             HHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc----cccCCcCccccCCcccCC-CCCCchhhH
Confidence            368999999999999999999999999999999999999987654432    223345678999998865 457889999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||+||++|+|++|..||......     +    ..            ..       .     ......++..+.+||.+|
T Consensus       166 wslG~il~el~~g~~~~~~~~~~-----~----~~------------~~-------~-----~~~~~~~~~~~~~li~~~  212 (237)
T cd05576         166 WSLGAILFELLTGKTLVECHPSG-----I----NT------------HT-------T-----LNIPEWVSEEARSLLQQL  212 (237)
T ss_pred             HHHHHHHHHHHHCcchhhcCchh-----c----cc------------cc-------c-----cCCcccCCHHHHHHHHHH
Confidence            99999999999999887432110     0    00            00       0     001124678899999999


Q ss_pred             cCCCCCCCcCH-----HHHHhcccc
Q 012191          161 LSVEPYKRATA-----SAALASEYF  180 (468)
Q Consensus       161 L~~DP~kRpTa-----~e~L~Hp~F  180 (468)
                      |+.||.+|+|+     .+++.||||
T Consensus       213 l~~dp~~R~~~~~~~~~~~~~h~~~  237 (237)
T cd05576         213 LQFNPTERLGAGVAGVEDIKSHPFF  237 (237)
T ss_pred             ccCCHHHhcCCCccchHHHHcCCCC
Confidence            99999999996     999999998


No 287
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.90  E-value=3.5e-24  Score=215.03  Aligned_cols=147  Identities=21%  Similarity=0.305  Sum_probs=114.6

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCC-ccccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP-LTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~-~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.||+|||++||+||||||+|||++.++.+||+|||++.......... .....++..|+|||.+.+ ..++.++||
T Consensus       116 ~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di  194 (316)
T cd05108         116 VQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILH-RIYTHQSDV  194 (316)
T ss_pred             HHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCCCcceeccCCccceeecChHHhcc-CCCCchhhh
Confidence            699999999999999999999999999999999999999998665332211 122234667999999876 468899999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++ |..||.+....+.. .+......++.                           ...++.++.+||.+
T Consensus       195 ~slGv~l~el~t~g~~p~~~~~~~~~~-~~~~~~~~~~~---------------------------~~~~~~~~~~li~~  246 (316)
T cd05108         195 WSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQ---------------------------PPICTIDVYMIMVK  246 (316)
T ss_pred             HHHHHHHHHHHcCCCCCCCCCCHHHHH-HHHhCCCCCCC---------------------------CCCCCHHHHHHHHH
Confidence            999999999997 99999876654433 23221111110                           12356788999999


Q ss_pred             hcCCCCCCCcCHHHHHhc
Q 012191          160 LLSVEPYKRATASAALAS  177 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~H  177 (468)
                      ||..||.+|||+.+++.+
T Consensus       247 cl~~~p~~Rps~~~l~~~  264 (316)
T cd05108         247 CWMIDADSRPKFRELIIE  264 (316)
T ss_pred             HccCChhhCcCHHHHHHH
Confidence            999999999999999986


No 288
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.90  E-value=3.4e-24  Score=222.50  Aligned_cols=150  Identities=32%  Similarity=0.487  Sum_probs=127.8

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcC--CCCCCCCcc
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLG--ATDYGPSVD   79 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g--~~~~s~~sD   79 (468)
                      .+.|.||.|||+.+.||||||..|||+++.|.|||+|||.|....     +..+++|||+|||||+++-  ...|+-++|
T Consensus       133 ~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~-----PAnsFvGTPywMAPEVILAMDEGqYdgkvD  207 (948)
T KOG0577|consen  133 HGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMA-----PANSFVGTPYWMAPEVILAMDEGQYDGKVD  207 (948)
T ss_pred             HHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcC-----chhcccCCccccchhHheeccccccCCccc
Confidence            367899999999999999999999999999999999999997665     4578899999999999863  357999999


Q ss_pred             eeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           80 LWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        80 IWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++..||.-.+||+...+.+..+..|... .+|..                        .  -++.+..+.+||..
T Consensus       208 vWSLGITCIELAERkPPlFnMNAMSALYHIAQN-esPtL------------------------q--s~eWS~~F~~Fvd~  260 (948)
T KOG0577|consen  208 VWSLGITCIELAERKPPLFNMNAMSALYHIAQN-ESPTL------------------------Q--SNEWSDYFRNFVDS  260 (948)
T ss_pred             eeeccchhhhhhhcCCCccCchHHHHHHHHHhc-CCCCC------------------------C--CchhHHHHHHHHHH
Confidence            999999999999999999888887777776442 11110                        0  13567889999999


Q ss_pred             hcCCCCCCCcCHHHHHhcccccCC
Q 012191          160 LLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      ||..-|.+|||.+++|.|+|....
T Consensus       261 CLqKipqeRptse~ll~H~fv~R~  284 (948)
T KOG0577|consen  261 CLQKIPQERPTSEELLKHRFVLRE  284 (948)
T ss_pred             HHhhCcccCCcHHHHhhcchhccC
Confidence            999999999999999999998753


No 289
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.90  E-value=3.9e-24  Score=210.06  Aligned_cols=147  Identities=19%  Similarity=0.265  Sum_probs=113.9

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC-CccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +.||+.||.|||++||+|+||||+|||++.++.+||+|||++......... ......++..|+|||.+.+ ..++.++|
T Consensus       115 ~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~D  193 (279)
T cd05109         115 CVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILH-RRFTHQSD  193 (279)
T ss_pred             HHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhcc-CCCCchhH
Confidence            369999999999999999999999999999999999999998766432211 1122234678999999876 45889999


Q ss_pred             eeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           80 LWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        80 IWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      ||||||++|||++ |.+||...........+ .....++                           ....++..+.+||.
T Consensus       194 i~slG~~l~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~---------------------------~~~~~~~~~~~li~  245 (279)
T cd05109         194 VWSYGVTVWELMTFGAKPYDGIPAREIPDLL-EKGERLP---------------------------QPPICTIDVYMIMV  245 (279)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-HCCCcCC---------------------------CCccCCHHHHHHHH
Confidence            9999999999998 89999766554433322 2111111                           01246788999999


Q ss_pred             HhcCCCCCCCcCHHHHHh
Q 012191          159 TLLSVEPYKRATASAALA  176 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~  176 (468)
                      +||..||.+|||+.+++.
T Consensus       246 ~~l~~dp~~Rp~~~~l~~  263 (279)
T cd05109         246 KCWMIDSECRPRFRELVD  263 (279)
T ss_pred             HHcCCChhhCcCHHHHHH
Confidence            999999999999999994


No 290
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2,  and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.90  E-value=5.8e-24  Score=204.71  Aligned_cols=147  Identities=28%  Similarity=0.465  Sum_probs=120.0

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      .||+.||.|||+.|++|+||+|+||+++.++.++|+|||++......   ......++..|+|||.+.+ ..++.++|+|
T Consensus       110 ~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~---~~~~~~~~~~~~~Pe~~~~-~~~~~~~D~~  185 (256)
T cd08530         110 IQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN---MAKTQIGTPHYMAPEVWKG-RPYSYKSDIW  185 (256)
T ss_pred             HHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC---CcccccCCccccCHHHHCC-CCCCchhhHH
Confidence            58999999999999999999999999999999999999998766543   2223467889999999876 4578899999


Q ss_pred             eeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhc
Q 012191           82 SVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLL  161 (468)
Q Consensus        82 SLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL  161 (468)
                      |||+++|+|++|..||...+..+....+...  ..+                          .....++.++.++|.+||
T Consensus       186 slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~--~~~--------------------------~~~~~~~~~~~~li~~~l  237 (256)
T cd08530         186 SLGCLLYEMATFAPPFEARSMQDLRYKVQRG--KYP--------------------------PIPPIYSQDLQNFIRSML  237 (256)
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--CCC--------------------------CCchhhCHHHHHHHHHHc
Confidence            9999999999999999887765544443221  100                          011246788999999999


Q ss_pred             CCCCCCCcCHHHHHhcccc
Q 012191          162 SVEPYKRATASAALASEYF  180 (468)
Q Consensus       162 ~~DP~kRpTa~e~L~Hp~F  180 (468)
                      ..+|.+|||+.++|+||+.
T Consensus       238 ~~~p~~Rp~~~~~l~~p~~  256 (256)
T cd08530         238 QVKPKLRPNCDKILASPAV  256 (256)
T ss_pred             CCCcccCCCHHHHhcCCCC
Confidence            9999999999999999974


No 291
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.90  E-value=3.6e-24  Score=209.33  Aligned_cols=147  Identities=18%  Similarity=0.245  Sum_probs=115.3

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||+|||++|++|+||||+|||++.++.++++|||.+...............++..|+|||.+.+ ..++.++||
T Consensus       113 ~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di  191 (266)
T cd05064         113 LPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQY-HHFSSASDV  191 (266)
T ss_pred             HHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccchhcccCCCCceeecCHHHHhh-CCccchhHH
Confidence            3689999999999999999999999999999999999999875443221111112234678999999876 568899999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++ |..||.+....+.+..+......+                            ....++..+.+++..
T Consensus       192 ~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~li~~  243 (266)
T cd05064         192 WSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLP----------------------------APRNCPNLLHQLMLD  243 (266)
T ss_pred             HHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCC----------------------------CCCCCCHHHHHHHHH
Confidence            999999999775 999999887776666553211100                            113467889999999


Q ss_pred             hcCCCCCCCcCHHHHHh
Q 012191          160 LLSVEPYKRATASAALA  176 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~  176 (468)
                      ||..+|.+|||+.++++
T Consensus       244 c~~~~p~~RP~~~~i~~  260 (266)
T cd05064         244 CWQKERGERPRFSQIHS  260 (266)
T ss_pred             HcCCCchhCCCHHHHHH
Confidence            99999999999999875


No 292
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.90  E-value=8.8e-25  Score=224.32  Aligned_cols=152  Identities=28%  Similarity=0.441  Sum_probs=125.9

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCC---CcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNE---GVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPS   77 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~---g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~   77 (468)
                      +.|||.||.|||-+||+|+||||+|||+...   ..+||||||+|++++..  ..-.+.+||+.|+|||++.. ..|..+
T Consensus       670 vtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk--sFRrsVVGTPAYLaPEVLrn-kGyNrS  746 (888)
T KOG4236|consen  670 VTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK--SFRRSVVGTPAYLAPEVLRN-KGYNRS  746 (888)
T ss_pred             HHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchh--hhhhhhcCCccccCHHHHhh-cccccc
Confidence            3699999999999999999999999999654   46999999999988765  34467799999999999987 569999


Q ss_pred             cceeeeehhhhhhhhcCCCCCCCchH-HHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHH
Q 012191           78 VDLWSVGCVFAELLIGKPILQGRTEV-EQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNL  156 (468)
Q Consensus        78 sDIWSLG~ILyeLltG~~pf~g~~~~-e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dL  156 (468)
                      -|+||+|+|+|.-|.|..||..+.+. +++++-   ..-.|.                         .-|.++++.++||
T Consensus       747 LDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNA---aFMyPp-------------------------~PW~eis~~Aidl  798 (888)
T KOG4236|consen  747 LDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNA---AFMYPP-------------------------NPWSEISPEAIDL  798 (888)
T ss_pred             ccceeeeEEEEEEecccccCCCccchhHHhhcc---ccccCC-------------------------CchhhcCHHHHHH
Confidence            99999999999999999999754432 333221   111111                         1235789999999


Q ss_pred             HHHhcCCCCCCCcCHHHHHhcccccCC
Q 012191          157 IETLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       157 L~~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      |..+|+..-.+|.|.+..|.|||++..
T Consensus       799 In~LLqVkm~kRysvdk~lsh~Wlq~y  825 (888)
T KOG4236|consen  799 INNLLQVKMRKRYSVDKSLSHPWLQDY  825 (888)
T ss_pred             HHHHHHHHHHHhcchHhhccchhhhcc
Confidence            999999999999999999999999875


No 293
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.90  E-value=4.1e-24  Score=204.64  Aligned_cols=153  Identities=35%  Similarity=0.580  Sum_probs=119.3

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC-CccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +.||+.||.|||+.|++|+||+|+||+++.++.++|+|||.+......... ......++..|+|||.+.+. .++.++|
T Consensus       107 ~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~-~~~~~~D  185 (260)
T cd06606         107 TRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGE-EYGRAAD  185 (260)
T ss_pred             HHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCC-CCCchhh
Confidence            468999999999999999999999999999999999999998766543210 12345678899999998763 4789999


Q ss_pred             eeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           80 LWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        80 IWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      ||||||++|+|++|..||......  ...+.......                        ........++..+.+||.+
T Consensus       186 v~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~------------------------~~~~~~~~~~~~l~~~i~~  239 (260)
T cd06606         186 IWSLGCTVIEMATGKPPWSELGNP--MAALYKIGSSG------------------------EPPEIPEHLSEEAKDFLRK  239 (260)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCch--HHHHHhccccC------------------------CCcCCCcccCHHHHHHHHH
Confidence            999999999999999999876521  11111111000                        0001112457889999999


Q ss_pred             hcCCCCCCCcCHHHHHhcccc
Q 012191          160 LLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      ||..||.+|||+.++|.||||
T Consensus       240 ~l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         240 CLRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             hCcCChhhCCCHHHHhhCCCC
Confidence            999999999999999999997


No 294
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.90  E-value=3.1e-24  Score=215.24  Aligned_cols=153  Identities=31%  Similarity=0.484  Sum_probs=133.1

Q ss_pred             HHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcceee
Q 012191            3 QLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWS   82 (468)
Q Consensus         3 QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIWS   82 (468)
                      .|+-||-|||++||++||||.+|||++.+|.+||+|||++..--... ......+||+.|+|||++.- .+|+.++|.||
T Consensus       458 EiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~-~TTkTFCGTPdYiAPEIi~Y-qPYgksvDWWa  535 (683)
T KOG0696|consen  458 EIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDG-VTTKTFCGTPDYIAPEIIAY-QPYGKSVDWWA  535 (683)
T ss_pred             HHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccCC-cceeeecCCCcccccceEEe-cccccchhHHH
Confidence            57889999999999999999999999999999999999986432221 23456799999999999874 67999999999


Q ss_pred             eehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhcC
Q 012191           83 VGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLS  162 (468)
Q Consensus        83 LG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL~  162 (468)
                      +||+|||||.|++||.|.++.+.+..|....-..|                             +.+|.++.+++..+|.
T Consensus       536 ~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyP-----------------------------KslSkEAv~ickg~lt  586 (683)
T KOG0696|consen  536 FGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYP-----------------------------KSLSKEAVAICKGLLT  586 (683)
T ss_pred             HHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCc-----------------------------ccccHHHHHHHHHHhh
Confidence            99999999999999999999999999987544333                             4688999999999999


Q ss_pred             CCCCCCcC-----HHHHHhcccccCCCCC
Q 012191          163 VEPYKRAT-----ASAALASEYFSTKPYA  186 (468)
Q Consensus       163 ~DP~kRpT-----a~e~L~Hp~F~~~p~~  186 (468)
                      ..|.+|..     -.++-.||||+...|.
T Consensus       587 K~P~kRLGcg~~ge~di~~H~FFR~iDWe  615 (683)
T KOG0696|consen  587 KHPGKRLGCGPEGERDIREHPFFRRIDWE  615 (683)
T ss_pred             cCCccccCCCCccccchhhCcchhhccHH
Confidence            99999975     3678899999998775


No 295
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.90  E-value=4.6e-24  Score=207.09  Aligned_cols=146  Identities=19%  Similarity=0.245  Sum_probs=115.5

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC--CccccccCCcccChhhhcCCCCCCCCcc
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ--PLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~--~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      .||+.||+|||++||+|+||||.|||++.++.++|+|||++.........  ......++..|+|||.+.. ..++.++|
T Consensus       102 ~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~D  180 (257)
T cd05116         102 HQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNY-YKFSSKSD  180 (257)
T ss_pred             HHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhcc-CCcCchhH
Confidence            68999999999999999999999999999999999999998765433211  1122233578999998865 45788999


Q ss_pred             eeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           80 LWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        80 IWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      ||||||++|||++ |.+||.+....+....+..... +                           .....+++++.+||.
T Consensus       181 i~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~-~---------------------------~~~~~~~~~l~~li~  232 (257)
T cd05116         181 VWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGER-M---------------------------ECPQRCPPEMYDLMK  232 (257)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC-C---------------------------CCCCCCCHHHHHHHH
Confidence            9999999999997 9999988776666555532110 0                           011247889999999


Q ss_pred             HhcCCCCCCCcCHHHHHh
Q 012191          159 TLLSVEPYKRATASAALA  176 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~  176 (468)
                      +||+.||.+||++.++..
T Consensus       233 ~~~~~~p~~Rp~~~~i~~  250 (257)
T cd05116         233 LCWTYGVDERPGFAVVEL  250 (257)
T ss_pred             HHhccCchhCcCHHHHHH
Confidence            999999999999998875


No 296
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.90  E-value=4.1e-24  Score=209.96  Aligned_cols=148  Identities=24%  Similarity=0.354  Sum_probs=114.0

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCC---cEEEEecCCccccCCCCCCC-ccccccCCcccChhhhcCCCCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEG---VLKLADFGLANFSNTGHRQP-LTSRVVTLWYRPPELLLGATDYGP   76 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g---~vKL~DFGla~~~~~~~~~~-~~~~~gt~~Y~APE~l~g~~~~s~   76 (468)
                      +.||+.||+|||+++++|+||||+|||++.++   .+||+|||++.......... ......+..|+|||++.+ ..++.
T Consensus       122 ~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~  200 (277)
T cd05036         122 ARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLD-GIFTS  200 (277)
T ss_pred             HHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhc-CCcCc
Confidence            36899999999999999999999999998765   59999999987653221111 112233467999999976 45899


Q ss_pred             Ccceeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHH
Q 012191           77 SVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVN  155 (468)
Q Consensus        77 ~sDIWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~d  155 (468)
                      ++|||||||++|+|++ |..||.+.+..+....+... ..+                           .....++..+.+
T Consensus       201 ~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~-~~~---------------------------~~~~~~~~~~~~  252 (277)
T cd05036         201 KTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGG-GRL---------------------------DPPKGCPGPVYR  252 (277)
T ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcC-CcC---------------------------CCCCCCCHHHHH
Confidence            9999999999999997 99999887766554443221 100                           001346788999


Q ss_pred             HHHHhcCCCCCCCcCHHHHHhc
Q 012191          156 LIETLLSVEPYKRATASAALAS  177 (468)
Q Consensus       156 LL~~mL~~DP~kRpTa~e~L~H  177 (468)
                      ||.+||+.||.+|||+.++|+|
T Consensus       253 ~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         253 IMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             HHHHHcCCCcccCcCHHHHHHH
Confidence            9999999999999999999986


No 297
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.90  E-value=6.5e-24  Score=206.17  Aligned_cols=147  Identities=22%  Similarity=0.365  Sum_probs=116.8

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||+|||+.|++|+||||+||+++.++.++|+|||++...............++..|+|||.+.+ ..++.++||
T Consensus       108 ~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~-~~~~~~~Di  186 (260)
T cd05067         108 AAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINY-GTFTIKSDV  186 (260)
T ss_pred             HHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCCcccccccCHHHhcc-CCcCcccch
Confidence            3689999999999999999999999999999999999999987655322222223345678999998865 457889999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++ |.+||.+.+..+....+......+                            ....++.++.+||.+
T Consensus       187 ~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~li~~  238 (260)
T cd05067         187 WSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMP----------------------------RPDNCPEELYELMRL  238 (260)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCC----------------------------CCCCCCHHHHHHHHH
Confidence            999999999998 999998877666555442211100                            112467889999999


Q ss_pred             hcCCCCCCCcCHHHHHh
Q 012191          160 LLSVEPYKRATASAALA  176 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~  176 (468)
                      ||..||.+|||+++++.
T Consensus       239 ~l~~~p~~Rp~~~~l~~  255 (260)
T cd05067         239 CWKEKPEERPTFEYLRS  255 (260)
T ss_pred             HccCChhhCCCHHHHHH
Confidence            99999999999999875


No 298
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological 
Probab=99.90  E-value=7.2e-24  Score=207.26  Aligned_cols=146  Identities=21%  Similarity=0.339  Sum_probs=115.7

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC-CCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR-QPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~-~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.||.|||+.||+|+||||+|||++.++.+||+|||++........ .......++..|+|||.+.+ ..++.++||
T Consensus       126 ~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di  204 (277)
T cd05032         126 AEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKD-GVFTTKSDV  204 (277)
T ss_pred             HHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhc-CCCCcccch
Confidence            5899999999999999999999999999999999999999875443221 11223355778999999865 458899999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++ |.+||.+.+..+....+..  +....                          ....++..+.+||.+
T Consensus       205 ~slG~il~el~t~g~~p~~~~~~~~~~~~~~~--~~~~~--------------------------~~~~~~~~~~~li~~  256 (277)
T cd05032         205 WSFGVVLWEMATLAEQPYQGLSNEEVLKFVID--GGHLD--------------------------LPENCPDKLLELMRM  256 (277)
T ss_pred             HHHHHHHHHhhccCCCCCccCCHHHHHHHHhc--CCCCC--------------------------CCCCCCHHHHHHHHH
Confidence            999999999998 9999988776665554431  11100                          012357889999999


Q ss_pred             hcCCCCCCCcCHHHHHh
Q 012191          160 LLSVEPYKRATASAALA  176 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~  176 (468)
                      ||+.+|.+|||+.+++.
T Consensus       257 ~l~~~p~~Rpt~~~l~~  273 (277)
T cd05032         257 CWQYNPKMRPTFLEIVS  273 (277)
T ss_pred             HcCCChhhCCCHHHHHH
Confidence            99999999999999986


No 299
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.90  E-value=5.3e-24  Score=209.71  Aligned_cols=146  Identities=23%  Similarity=0.321  Sum_probs=115.0

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC-CccccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.||+|||+.||+|+||||+|||++.++.++|+|||++......... ......+++.|+|||.+.+ ..++.++||
T Consensus       129 ~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di  207 (280)
T cd05092         129 SQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILY-RKFTTESDI  207 (280)
T ss_pred             HHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhcc-CCcCchhhH
Confidence            68999999999999999999999999999999999999998654332111 1122234678999999876 458899999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++ |.+||......+.+..+....  +.                          .....+++.+.+||.+
T Consensus       208 ~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~--~~--------------------------~~~~~~~~~~~~li~~  259 (280)
T cd05092         208 WSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGR--EL--------------------------ERPRTCPPEVYAIMQG  259 (280)
T ss_pred             HHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCc--cC--------------------------CCCCCCCHHHHHHHHH
Confidence            999999999998 999998776665555443211  10                          0012467889999999


Q ss_pred             hcCCCCCCCcCHHHHHh
Q 012191          160 LLSVEPYKRATASAALA  176 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~  176 (468)
                      ||..||.+||++.+++.
T Consensus       260 cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         260 CWQREPQQRMVIKDIHS  276 (280)
T ss_pred             HccCChhhCCCHHHHHH
Confidence            99999999999999985


No 300
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.90  E-value=7.1e-24  Score=219.41  Aligned_cols=145  Identities=24%  Similarity=0.402  Sum_probs=123.2

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      .||++|++||+++++|||||-..||||+++..+||+|||+|+....+............-|.|||.+.. ..++.++|||
T Consensus       310 ~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~-~~FS~kSDVW  388 (468)
T KOG0197|consen  310 AQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNY-GKFSSKSDVW  388 (468)
T ss_pred             HHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCCCceecCHHHHhh-CCccccccee
Confidence            599999999999999999999999999999999999999999655443333333344677999999976 4689999999


Q ss_pred             eeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           82 SVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        82 SLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||||+||||+| |+.||.+.+..+.+..+.+....|..                            ..+|+.+.+|+..|
T Consensus       389 SFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P----------------------------~~CP~~vY~lM~~C  440 (468)
T KOG0197|consen  389 SFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRP----------------------------EGCPDEVYELMKSC  440 (468)
T ss_pred             ehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCC----------------------------CCCCHHHHHHHHHH
Confidence            99999999998 99999999999999988665433321                            36899999999999


Q ss_pred             cCCCCCCCcCHHHHH
Q 012191          161 LSVEPYKRATASAAL  175 (468)
Q Consensus       161 L~~DP~kRpTa~e~L  175 (468)
                      |..+|++|||.+.+.
T Consensus       441 W~~~P~~RPtF~~L~  455 (468)
T KOG0197|consen  441 WHEDPEDRPTFETLR  455 (468)
T ss_pred             hhCCcccCCCHHHHH
Confidence            999999999998665


No 301
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.90  E-value=7.6e-24  Score=205.29  Aligned_cols=145  Identities=23%  Similarity=0.351  Sum_probs=117.0

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      .||+.||.|||++||+|+||+|+||+++.++.+||+|||++........ ......++..|+|||.+.+ ..++.++|||
T Consensus       111 ~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~-~~~~~~~~~~~~~PE~~~~-~~~~~~~Diw  188 (261)
T cd05148         111 CQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY-LSSDKKIPYKWTAPEAASH-GTFSTKSDVW  188 (261)
T ss_pred             HHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCccc-cccCCCCceEecCHHHHcc-CCCCchhhHH
Confidence            6899999999999999999999999999999999999999876543211 1223345678999999876 4688899999


Q ss_pred             eeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           82 SVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        82 SLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||||++|+|++ |..||.+....+.+..+......+                            ....+++.+.++|.+|
T Consensus       189 slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~i~~~  240 (261)
T cd05148         189 SFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMP----------------------------CPAKCPQEIYKIMLEC  240 (261)
T ss_pred             HHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCC----------------------------CCCCCCHHHHHHHHHH
Confidence            99999999998 899998877766666554311110                            0135678899999999


Q ss_pred             cCCCCCCCcCHHHHHh
Q 012191          161 LSVEPYKRATASAALA  176 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~  176 (468)
                      |..||.+|||+.++++
T Consensus       241 l~~~p~~Rpt~~~l~~  256 (261)
T cd05148         241 WAAEPEDRPSFKALRE  256 (261)
T ss_pred             cCCCchhCcCHHHHHH
Confidence            9999999999999985


No 302
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.90  E-value=1.4e-24  Score=227.38  Aligned_cols=153  Identities=27%  Similarity=0.469  Sum_probs=131.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      |.|++.||+|||+++|||||||.+||||+.+.++||+|||++.++..+  ..+...+|++.|.|||++.|....++.+|+
T Consensus       161 F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~--~~lqt~cgsppyAaPEl~~g~~y~gpe~D~  238 (596)
T KOG0586|consen  161 FRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYG--LMLQTFCGSPPYAAPELFNGKKYDGPEVDI  238 (596)
T ss_pred             hHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeeccc--ccccccCCCCCccChHhhcCcccCCcceeh
Confidence            579999999999999999999999999999999999999999998855  456778999999999999998878999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||+|+|||-|++|..||.|.+-.+.-...+.....                             ..--++.++.+||++|
T Consensus       239 Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~r-----------------------------Ip~~ms~dce~lLrk~  289 (596)
T KOG0586|consen  239 WSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYR-----------------------------IPFYMSCDCEDLLRKF  289 (596)
T ss_pred             hhhhhhheeeeecccccCCcccccccchheeeeec-----------------------------ccceeechhHHHHHHh
Confidence            99999999999999999987755544333221100                             0123678899999999


Q ss_pred             cCCCCCCCcCHHHHHhcccccCCC
Q 012191          161 LSVEPYKRATASAALASEYFSTKP  184 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F~~~p  184 (468)
                      |.++|.+|++.+++..|.|....-
T Consensus       290 lvl~Pskr~~~dqim~~~W~n~~~  313 (596)
T KOG0586|consen  290 LVLNPSKRGPCDQIMKDRWRNDLL  313 (596)
T ss_pred             hccCccccCCHHHhhhhcccchhh
Confidence            999999999999999999998653


No 303
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.90  E-value=6.6e-24  Score=205.66  Aligned_cols=142  Identities=18%  Similarity=0.310  Sum_probs=113.6

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      .||+.||+|||++||+|+||||+||+++.++.+||+|||++......    .....++..|+|||.+.+ ..++.++|||
T Consensus       109 ~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~  183 (256)
T cd05082         109 LDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----QDTGKLPVKWTAPEALRE-KKFSTKSDVW  183 (256)
T ss_pred             HHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceecccc----CCCCccceeecCHHHHcc-CCCCchhhhH
Confidence            68999999999999999999999999999999999999998654332    122234567999999866 4578899999


Q ss_pred             eeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           82 SVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        82 SLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||||++|+|++ |..||...+..+....+....  .+                          .....++..+.+||.+|
T Consensus       184 slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~--~~--------------------------~~~~~~~~~~~~li~~~  235 (256)
T cd05082         184 SFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGY--KM--------------------------DAPDGCPPVVYDVMKQC  235 (256)
T ss_pred             HHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC--CC--------------------------CCCCCCCHHHHHHHHHH
Confidence            99999999997 999998766555444442210  00                          01135688999999999


Q ss_pred             cCCCCCCCcCHHHHHh
Q 012191          161 LSVEPYKRATASAALA  176 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~  176 (468)
                      |..||.+|||+.++++
T Consensus       236 l~~~p~~Rpt~~~l~~  251 (256)
T cd05082         236 WHLDAATRPSFLQLRE  251 (256)
T ss_pred             hcCChhhCcCHHHHHH
Confidence            9999999999999985


No 304
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.90  E-value=5.9e-24  Score=207.79  Aligned_cols=142  Identities=20%  Similarity=0.289  Sum_probs=109.6

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCc-------EEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGV-------LKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATD   73 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~-------vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~   73 (468)
                      +.||+.||+|||++||+||||||+|||++.++.       ++++|||++......     ....++..|+|||.+.....
T Consensus       111 ~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~  185 (262)
T cd05077         111 AKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSR-----QECVERIPWIAPECVEDSKN  185 (262)
T ss_pred             HHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCc-----ccccccccccChhhhcCCCC
Confidence            369999999999999999999999999987654       899999998654321     23457788999999875567


Q ss_pred             CCCCcceeeeehhhhhhh-hcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHH
Q 012191           74 YGPSVDLWSVGCVFAELL-IGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTT  152 (468)
Q Consensus        74 ~s~~sDIWSLG~ILyeLl-tG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~  152 (468)
                      ++.++|||||||++|+|+ .|..||.+....+.. .+....  .                           ......+.+
T Consensus       186 ~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-~~~~~~--~---------------------------~~~~~~~~~  235 (262)
T cd05077         186 LSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-RFYEGQ--C---------------------------MLVTPSCKE  235 (262)
T ss_pred             CCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-HHHhcC--c---------------------------cCCCCChHH
Confidence            899999999999999997 588888765433321 111100  0                           001124567


Q ss_pred             HHHHHHHhcCCCCCCCcCHHHHHhc
Q 012191          153 AVNLIETLLSVEPYKRATASAALAS  177 (468)
Q Consensus       153 l~dLL~~mL~~DP~kRpTa~e~L~H  177 (468)
                      +.+||.+||+.||.+|||+.++|++
T Consensus       236 ~~~li~~cl~~dp~~Rp~~~~il~~  260 (262)
T cd05077         236 LADLMTHCMNYDPNQRPFFRAIMRD  260 (262)
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHHh
Confidence            8999999999999999999999975


No 305
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.90  E-value=8.4e-24  Score=218.41  Aligned_cols=148  Identities=21%  Similarity=0.341  Sum_probs=113.6

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCc-cccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL-TSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~-~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.||.|||++||+||||||+|||++.++.+||+|||++........... ....++..|+|||++.+ ..++.++||
T Consensus       221 ~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDi  299 (375)
T cd05104         221 YQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFN-CVYTFESDV  299 (375)
T ss_pred             HHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcC-CCCCCCCCH
Confidence            5999999999999999999999999999999999999999876543321111 12234567999999976 468999999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++ |.+||.+......+.++......+                           ......+.++.+||.+
T Consensus       300 ~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~l~~li~~  352 (375)
T cd05104         300 WSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRM---------------------------LSPECAPSEMYDIMKS  352 (375)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccC---------------------------CCCCCCCHHHHHHHHH
Confidence            999999999997 899998765443333332211000                           0012356789999999


Q ss_pred             hcCCCCCCCcCHHHHHhc
Q 012191          160 LLSVEPYKRATASAALAS  177 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~H  177 (468)
                      ||+.||.+|||+.++++.
T Consensus       353 cl~~dP~~RPs~~eil~~  370 (375)
T cd05104         353 CWDADPLKRPTFKQIVQL  370 (375)
T ss_pred             HccCChhHCcCHHHHHHH
Confidence            999999999999999864


No 306
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.90  E-value=7.5e-24  Score=208.51  Aligned_cols=147  Identities=20%  Similarity=0.322  Sum_probs=116.1

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC-CccccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.||.|||++||+|+||||+|||++.++.+||+|||++......... ......++..|+|||.+.+ ..++.++||
T Consensus       131 ~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv  209 (283)
T cd05090         131 IQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMY-GKFSSDSDI  209 (283)
T ss_pred             HHHHHHHHHHHhcCeehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCccceecChHHhcc-CCCCchhhh
Confidence            58999999999999999999999999999999999999999765432211 1123344677999999876 458899999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++ |.+||.+.........+.... .+                           .....++..+.+||.+
T Consensus       210 ~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-~~---------------------------~~~~~~~~~~~~li~~  261 (283)
T cd05090         210 WSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQ-LL---------------------------PCSEDCPPRMYSLMTE  261 (283)
T ss_pred             HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC-cC---------------------------CCCCCCCHHHHHHHHH
Confidence            999999999998 999998876655544443211 00                           0113467889999999


Q ss_pred             hcCCCCCCCcCHHHHHhc
Q 012191          160 LLSVEPYKRATASAALAS  177 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~H  177 (468)
                      ||+.||.+||++.+++++
T Consensus       262 cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         262 CWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             HcccCcccCcCHHHHHHH
Confidence            999999999999999875


No 307
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.90  E-value=8.5e-24  Score=206.03  Aligned_cols=148  Identities=21%  Similarity=0.350  Sum_probs=116.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC-CccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +.||+.||.|||++||+|+||||+|||++.++.++|+|||++......... ......++..|+|||.+.+ ..++.++|
T Consensus       112 ~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~-~~~~~~~D  190 (266)
T cd05033         112 LRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAY-RKFTSASD  190 (266)
T ss_pred             HHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccccccceeccCCCCCccccChhhhcc-CCCccccc
Confidence            368999999999999999999999999999999999999999876421111 1112234678999999875 45889999


Q ss_pred             eeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           80 LWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        80 IWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      ||||||++|+|++ |..||......+....+......+.                            ...++..+.+||.
T Consensus       191 v~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~l~~li~  242 (266)
T cd05033         191 VWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLPP----------------------------PMDCPSALYQLML  242 (266)
T ss_pred             hHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCC----------------------------CCCCCHHHHHHHH
Confidence            9999999999997 9999987766655555532111110                            1246788999999


Q ss_pred             HhcCCCCCCCcCHHHHHhc
Q 012191          159 TLLSVEPYKRATASAALAS  177 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~H  177 (468)
                      +||+.||.+||++.+++++
T Consensus       243 ~cl~~~p~~Rp~~~ei~~~  261 (266)
T cd05033         243 DCWQKDRNERPTFSQIVST  261 (266)
T ss_pred             HHcCCCcccCcCHHHHHHH
Confidence            9999999999999999875


No 308
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.90  E-value=9.1e-24  Score=204.89  Aligned_cols=149  Identities=27%  Similarity=0.516  Sum_probs=118.5

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.|++|+||+|+||+++. +.++|+|||++....... .......++..|+|||.+.+ ..++.++|+
T Consensus       112 ~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv  188 (260)
T cd08222         112 FIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC-DLATTFTGTPYYMSPEALKH-QGYDSKSDI  188 (260)
T ss_pred             HHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCCc-ccccCCCCCcCccCHHHHcc-CCCCchhhH
Confidence            368999999999999999999999999975 679999999987654322 12223456888999998865 457889999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||||+++|+|++|..||.+.........+..  +..+                          .....++.++.+||.+|
T Consensus       189 ~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~--~~~~--------------------------~~~~~~~~~~~~li~~~  240 (260)
T cd08222         189 WSLGCILYEMCCLAHAFEGQNFLSVVLRIVE--GPTP--------------------------SLPETYSRQLNSIMQSM  240 (260)
T ss_pred             HHHHHHHHHHHhCCCCCCCccHHHHHHHHHc--CCCC--------------------------CCcchhcHHHHHHHHHH
Confidence            9999999999999999987666555444422  1111                          00134678899999999


Q ss_pred             cCCCCCCCcCHHHHHhcccc
Q 012191          161 LSVEPYKRATASAALASEYF  180 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F  180 (468)
                      |..||.+||++.++|+||||
T Consensus       241 l~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         241 LNKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             hcCChhhCcCHHHHhhCCCC
Confidence            99999999999999999997


No 309
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.90  E-value=9.8e-24  Score=204.55  Aligned_cols=147  Identities=20%  Similarity=0.264  Sum_probs=114.6

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCc--cccccCCcccChhhhcCCCCCCCCc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL--TSRVVTLWYRPPELLLGATDYGPSV   78 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~--~~~~gt~~Y~APE~l~g~~~~s~~s   78 (468)
                      +.||+.||.|||..||+|+||||+|||++.++.+||+|||++...........  ....++..|+|||.+.+ ..++.++
T Consensus       101 ~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~  179 (257)
T cd05060         101 AHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINY-GKFSSKS  179 (257)
T ss_pred             HHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCccccccccCHHHhcC-CCCCccc
Confidence            36899999999999999999999999999999999999999876543322111  11122467999998865 4588999


Q ss_pred             ceeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHH
Q 012191           79 DLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLI  157 (468)
Q Consensus        79 DIWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL  157 (468)
                      |||||||++|+|++ |.+||...+..+....+... ...                           .....++..+.+||
T Consensus       180 Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~-~~~---------------------------~~~~~~~~~l~~li  231 (257)
T cd05060         180 DVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESG-ERL---------------------------PRPEECPQEIYSIM  231 (257)
T ss_pred             hHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcC-CcC---------------------------CCCCCCCHHHHHHH
Confidence            99999999999997 99999877665544443221 000                           01134678899999


Q ss_pred             HHhcCCCCCCCcCHHHHHh
Q 012191          158 ETLLSVEPYKRATASAALA  176 (468)
Q Consensus       158 ~~mL~~DP~kRpTa~e~L~  176 (468)
                      .+||..||.+|||+.++++
T Consensus       232 ~~cl~~~p~~Rp~~~~l~~  250 (257)
T cd05060         232 LSCWKYRPEDRPTFSELES  250 (257)
T ss_pred             HHHhcCChhhCcCHHHHHH
Confidence            9999999999999999985


No 310
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.90  E-value=7.9e-24  Score=205.17  Aligned_cols=147  Identities=24%  Similarity=0.365  Sum_probs=117.1

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+|+||||+||+++.++.++|+|||++................+..|+|||.+.+ ..++.++||
T Consensus       109 ~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di  187 (261)
T cd05034         109 AAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANY-GRFTIKSDV  187 (261)
T ss_pred             HHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhhhhhhccCCCccccCHHHhcc-CCcCchhHH
Confidence            3689999999999999999999999999999999999999987654321111122234568999999876 457899999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++ |..||.+.+....+..+......+                            .....+..+.++|.+
T Consensus       188 ~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~i~~  239 (261)
T cd05034         188 WSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMP----------------------------RPPNCPEELYDLMLQ  239 (261)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC----------------------------CCCCCCHHHHHHHHH
Confidence            999999999998 999998887776666654321111                            012357889999999


Q ss_pred             hcCCCCCCCcCHHHHHh
Q 012191          160 LLSVEPYKRATASAALA  176 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~  176 (468)
                      ||..||.+|||+.++++
T Consensus       240 ~l~~~p~~Rp~~~~l~~  256 (261)
T cd05034         240 CWDKDPEERPTFEYLQS  256 (261)
T ss_pred             HcccCcccCCCHHHHHH
Confidence            99999999999999874


No 311
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.90  E-value=9.6e-24  Score=206.11  Aligned_cols=147  Identities=24%  Similarity=0.342  Sum_probs=116.4

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      .||+.||.|||+.|++|+||||+|||++.++.++|+|||++...............++..|+|||.+.+ ..++.++|||
T Consensus       114 ~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~  192 (270)
T cd05056         114 YQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINF-RRFTSASDVW  192 (270)
T ss_pred             HHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccccceecCCCCccccccChhhhcc-CCCCchhhhH
Confidence            689999999999999999999999999999999999999987654332111222233567999998865 4688999999


Q ss_pred             eeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           82 SVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        82 SLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||||++|+|++ |..||.+.+..+.+..+..... +                           .....++..+.+||.+|
T Consensus       193 slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~-~---------------------------~~~~~~~~~~~~li~~~  244 (270)
T cd05056         193 MFGVCMWEILMLGVKPFQGVKNNDVIGRIENGER-L---------------------------PMPPNCPPTLYSLMTKC  244 (270)
T ss_pred             HHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCc-C---------------------------CCCCCCCHHHHHHHHHH
Confidence            99999999986 9999988877665554422110 0                           01135678999999999


Q ss_pred             cCCCCCCCcCHHHHHhc
Q 012191          161 LSVEPYKRATASAALAS  177 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~H  177 (468)
                      |..+|.+|||+.+++..
T Consensus       245 l~~~P~~Rpt~~~~~~~  261 (270)
T cd05056         245 WAYDPSKRPRFTELKAQ  261 (270)
T ss_pred             cCCChhhCcCHHHHHHH
Confidence            99999999999999864


No 312
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.90  E-value=8.2e-24  Score=205.19  Aligned_cols=147  Identities=22%  Similarity=0.296  Sum_probs=112.2

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC---CCccccccCCcccChhhhcCCCCCCCCc
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR---QPLTSRVVTLWYRPPELLLGATDYGPSV   78 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~---~~~~~~~gt~~Y~APE~l~g~~~~s~~s   78 (468)
                      .||+.||.|||+.+|+|+||||+|||++.++.+||+|||++........   .......++..|+|||.+.+ ..++.++
T Consensus       105 ~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~  183 (262)
T cd05058         105 LQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQT-QKFTTKS  183 (262)
T ss_pred             HHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecccccCcCCccccChhHhcc-CccchHH
Confidence            5899999999999999999999999999999999999999865432211   11112344678999999876 4688999


Q ss_pred             ceeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHH
Q 012191           79 DLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLI  157 (468)
Q Consensus        79 DIWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL  157 (468)
                      |||||||++|+|++ |.+||......+....+..  +....                          ....++..+.+|+
T Consensus       184 Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~--~~~~~--------------------------~~~~~~~~~~~li  235 (262)
T cd05058         184 DVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQ--GRRLL--------------------------QPEYCPDPLYEVM  235 (262)
T ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhc--CCCCC--------------------------CCCcCCHHHHHHH
Confidence            99999999999999 5677876655544433321  11000                          0023577899999


Q ss_pred             HHhcCCCCCCCcCHHHHHhc
Q 012191          158 ETLLSVEPYKRATASAALAS  177 (468)
Q Consensus       158 ~~mL~~DP~kRpTa~e~L~H  177 (468)
                      ..||..+|.+|||+.+++..
T Consensus       236 ~~cl~~~p~~Rp~~~~il~~  255 (262)
T cd05058         236 LSCWHPKPEMRPTFSELVSR  255 (262)
T ss_pred             HHHcCCChhhCCCHHHHHHH
Confidence            99999999999999999864


No 313
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.90  E-value=8.7e-24  Score=211.12  Aligned_cols=145  Identities=24%  Similarity=0.320  Sum_probs=112.4

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      .||+.||+|||++||+||||||+|||++.++.+||+|||++.......  ......++..|+|||.+.+ ..++.++|||
T Consensus       131 ~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~  207 (303)
T cd05088         131 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNY-SVYTTNSDVW  207 (303)
T ss_pred             HHHHHHHHHHHhCCccccccchheEEecCCCcEEeCccccCcccchhh--hcccCCCcccccCHHHHhc-cCCcccccch
Confidence            689999999999999999999999999999999999999985322110  1111233567999998865 4588999999


Q ss_pred             eeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           82 SVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        82 SLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||||++|+|++ |.+||.+.+..+....+....  ..                          .....++..+.+||.+|
T Consensus       208 slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~--~~--------------------------~~~~~~~~~~~~li~~~  259 (303)
T cd05088         208 SYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY--RL--------------------------EKPLNCDDEVYDLMRQC  259 (303)
T ss_pred             hhhhHHHHHHhcCCCCcccCChHHHHHHHhcCC--cC--------------------------CCCCCCCHHHHHHHHHH
Confidence            99999999998 999998776655444331100  00                          00123678899999999


Q ss_pred             cCCCCCCCcCHHHHHhc
Q 012191          161 LSVEPYKRATASAALAS  177 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~H  177 (468)
                      |..||.+|||+.++|.+
T Consensus       260 l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         260 WREKPYERPSFAQILVS  276 (303)
T ss_pred             cCCChhhCcCHHHHHHH
Confidence            99999999999999975


No 314
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.90  E-value=1.5e-23  Score=202.85  Aligned_cols=148  Identities=22%  Similarity=0.318  Sum_probs=117.6

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC--CccccccCCcccChhhhcCCCCCCCCc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ--PLTSRVVTLWYRPPELLLGATDYGPSV   78 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~--~~~~~~gt~~Y~APE~l~g~~~~s~~s   78 (468)
                      +.||+.||+|||++|++|+||+|+||+++.++.+||+|||++.........  ......++..|+|||.+.+ ..++.++
T Consensus       103 ~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~  181 (257)
T cd05040         103 AVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRT-RTFSHAS  181 (257)
T ss_pred             HHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceecccCCCCCceecCHHHhcc-cCcCchh
Confidence            369999999999999999999999999999999999999998766432211  1112345778999998865 4588999


Q ss_pred             ceeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHH
Q 012191           79 DLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLI  157 (468)
Q Consensus        79 DIWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL  157 (468)
                      |||||||++|+|++ |..||...+..+.+..+.......+                           ....++..+.+||
T Consensus       182 Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~li  234 (257)
T cd05040         182 DVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLE---------------------------RPEACPQDIYNVM  234 (257)
T ss_pred             hhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCC---------------------------CCccCCHHHHHHH
Confidence            99999999999998 9999988777766665543110000                           0124678899999


Q ss_pred             HHhcCCCCCCCcCHHHHHh
Q 012191          158 ETLLSVEPYKRATASAALA  176 (468)
Q Consensus       158 ~~mL~~DP~kRpTa~e~L~  176 (468)
                      .+||..+|.+|||+.++++
T Consensus       235 ~~~l~~~p~~Rps~~~~~~  253 (257)
T cd05040         235 LQCWAHNPADRPTFAALRE  253 (257)
T ss_pred             HHHCCCCcccCCCHHHHHH
Confidence            9999999999999999985


No 315
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.90  E-value=1.2e-23  Score=207.22  Aligned_cols=147  Identities=16%  Similarity=0.250  Sum_probs=114.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCC-ccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP-LTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~-~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +.||+.||.|||++|++|+||||+|||++.++.+||+|||++.......... .....++..|+|||.+.+ ..++.++|
T Consensus       115 ~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~D  193 (279)
T cd05111         115 CVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILF-GRYTHQSD  193 (279)
T ss_pred             HHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhcc-CCcCchhh
Confidence            3699999999999999999999999999999999999999997654332211 223345678999999876 45899999


Q ss_pred             eeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           80 LWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        80 IWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      ||||||++|||++ |..||.+.........+ .....++                           .....+.++.+++.
T Consensus       194 v~slG~il~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~---------------------------~~~~~~~~~~~li~  245 (279)
T cd05111         194 VWSYGVTVWEMMSYGAEPYAGMRPHEVPDLL-EKGERLA---------------------------QPQICTIDVYMVMV  245 (279)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-HCCCcCC---------------------------CCCCCCHHHHHHHH
Confidence            9999999999998 99999887654433332 2111110                           00124567899999


Q ss_pred             HhcCCCCCCCcCHHHHHh
Q 012191          159 TLLSVEPYKRATASAALA  176 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~  176 (468)
                      +||..||.+|||+.++++
T Consensus       246 ~c~~~~p~~Rps~~el~~  263 (279)
T cd05111         246 KCWMIDENVRPTFKELAN  263 (279)
T ss_pred             HHcCCCcccCcCHHHHHH
Confidence            999999999999999986


No 316
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.90  E-value=4.7e-24  Score=195.56  Aligned_cols=145  Identities=22%  Similarity=0.290  Sum_probs=109.6

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+++      ||+|||++.++.+++  ||++......      ...+|+.|+|||++.+ ..|+.++||
T Consensus        23 ~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~------~~~g~~~y~aPE~~~~-~~~~~~~Di   87 (176)
T smart00750       23 CLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPE------QSRVDPYFMAPEVIQG-QSYTEKADI   87 (176)
T ss_pred             HHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccc------cCCCcccccChHHhcC-CCCcchhhH
Confidence            479999999999998      999999999999999  9998765432      2267899999999977 468999999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchH-HHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcH--HHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEV-EQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPT--TAVNLI  157 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~-e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~--~l~dLL  157 (468)
                      ||||||+|||++|.+||...... ..+..+........   .                ...   .....++.  .+.+||
T Consensus        88 wSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~----------------~~~---~~~~~~~~~~~~~~~i  145 (176)
T smart00750       88 YSLGITLYEALDYELPYNEERELSAILEILLNGMPADD---P----------------RDR---SNLESVSAARSFADFM  145 (176)
T ss_pred             HHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCC---c----------------ccc---ccHHHHHhhhhHHHHH
Confidence            99999999999999999765443 22333322111000   0                000   00012233  689999


Q ss_pred             HHhcCCCCCCCcCHHHHHhcccccC
Q 012191          158 ETLLSVEPYKRATASAALASEYFST  182 (468)
Q Consensus       158 ~~mL~~DP~kRpTa~e~L~Hp~F~~  182 (468)
                      .+||..||.+|||+.+++.|+|+..
T Consensus       146 ~~cl~~~p~~Rp~~~~ll~~~~~~~  170 (176)
T smart00750      146 RVCASRLPQRREAANHYLAHCRALF  170 (176)
T ss_pred             HHHHhcccccccCHHHHHHHHHHHH
Confidence            9999999999999999999999753


No 317
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.90  E-value=8.2e-24  Score=207.84  Aligned_cols=153  Identities=30%  Similarity=0.463  Sum_probs=122.2

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++....... .......++..|+|||.+.+ ..++.++|+
T Consensus       107 ~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv  184 (277)
T cd06641         107 LREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-IKRNTFVGTPFWMAPEVIKQ-SAYDSKADI  184 (277)
T ss_pred             HHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccch-hhhccccCCccccChhhhcc-CCCCchhhH
Confidence            3689999999999999999999999999999999999999986554321 11223467889999999865 457889999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|..||...........+...  .++                          .....++.++.++|.+|
T Consensus       185 ~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~--------------------------~~~~~~~~~~~~~i~~~  236 (277)
T cd06641         185 WSLGITAIELAKGEPPHSELHPMKVLFLIPKN--NPP--------------------------TLEGNYSKPLKEFVEAC  236 (277)
T ss_pred             HHHHHHHHHHHcCCCCCCccchHHHHHHHhcC--CCC--------------------------CCCcccCHHHHHHHHHH
Confidence            99999999999999999876654444433211  010                          01134678899999999


Q ss_pred             cCCCCCCCcCHHHHHhcccccCC
Q 012191          161 LSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      |..||.+||++.++|.||||...
T Consensus       237 l~~~p~~Rp~~~~~l~~~~~~~~  259 (277)
T cd06641         237 LNKEPSFRPTAKELLKHKFIVRF  259 (277)
T ss_pred             ccCChhhCcCHHHHHhCHHHhhh
Confidence            99999999999999999999874


No 318
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.90  E-value=1.3e-23  Score=207.71  Aligned_cols=153  Identities=17%  Similarity=0.209  Sum_probs=115.8

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC-CccccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.||.|||++||+|+||||+||+++.++.++|+|||++......... ......++..|+|||.+.+ ..++.++||
T Consensus       137 ~~i~~al~~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv  215 (296)
T cd05051         137 TQIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLL-GKFTTKSDV  215 (296)
T ss_pred             HHHHHHHHHHHHcCccccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhc-CCCCccchh
Confidence            68999999999999999999999999999999999999998754332211 1123345678999999876 458899999


Q ss_pred             eeeehhhhhhhh--cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           81 WSVGCVFAELLI--GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        81 WSLG~ILyeLlt--G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |||||++|+|++  +..||...+....+..+..........                     ........++.++.+||.
T Consensus       216 ~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~l~~li~  274 (296)
T cd05051         216 WAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQ---------------------IYLPRPPNCPKDIYELML  274 (296)
T ss_pred             hhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhcccccccc---------------------ccCCCccCCCHHHHHHHH
Confidence            999999999998  778887766666555543321111000                     000111346788999999


Q ss_pred             HhcCCCCCCCcCHHHHHh
Q 012191          159 TLLSVEPYKRATASAALA  176 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~  176 (468)
                      +||+.||.+|||+.++++
T Consensus       275 ~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         275 ECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             HHhccChhcCCCHHHHHH
Confidence            999999999999999975


No 319
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.90  E-value=1.1e-23  Score=209.89  Aligned_cols=147  Identities=24%  Similarity=0.327  Sum_probs=116.2

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCC-ccccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP-LTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~-~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.||.|||++||+|+||||+|||++.++.+||+|||++.......... .....++..|+|||++.+ ..++.++||
T Consensus       144 ~qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di  222 (304)
T cd05101         144 YQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDV  222 (304)
T ss_pred             HHHHHHHHHHHHCCeeecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhcc-CCCCchhhH
Confidence            589999999999999999999999999999999999999987654322111 122344678999999876 458899999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++ |..||.+.+..+....+....  ..                          .....++..+.+||.+
T Consensus       223 ~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~--~~--------------------------~~~~~~~~~~~~li~~  274 (304)
T cd05101         223 WSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH--RM--------------------------DKPANCTNELYMMMRD  274 (304)
T ss_pred             HHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC--cC--------------------------CCCCCCCHHHHHHHHH
Confidence            999999999998 889998877666555442210  00                          0012567889999999


Q ss_pred             hcCCCCCCCcCHHHHHhc
Q 012191          160 LLSVEPYKRATASAALAS  177 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~H  177 (468)
                      ||..+|.+|||+.++|+.
T Consensus       275 cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         275 CWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             HcccChhhCCCHHHHHHH
Confidence            999999999999999974


No 320
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.90  E-value=1.5e-23  Score=201.88  Aligned_cols=147  Identities=22%  Similarity=0.326  Sum_probs=114.9

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      .||+.||.|||++|++|+||+|+||+++.++.++|+|||++...............++..|+|||.+.+ ..++.++|||
T Consensus       100 ~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~  178 (250)
T cd05085         100 LDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNY-GRYSSESDVW  178 (250)
T ss_pred             HHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcccccCHHHhcc-CCCCchhHHH
Confidence            689999999999999999999999999999999999999986544322111122233567999999865 4578899999


Q ss_pred             eeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           82 SVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        82 SLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||||++|+|++ |..||.+.........+......                            .....++..+.+|+.+|
T Consensus       179 slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~li~~~  230 (250)
T cd05085         179 SYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRM----------------------------SCPQKCPDDVYKVMQRC  230 (250)
T ss_pred             HHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCC----------------------------CCCCCCCHHHHHHHHHH
Confidence            99999999998 99999887666554444221100                            01124678999999999


Q ss_pred             cCCCCCCCcCHHHHHhc
Q 012191          161 LSVEPYKRATASAALAS  177 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~H  177 (468)
                      |..+|.+|||+.++++.
T Consensus       231 l~~~p~~Rp~~~~l~~~  247 (250)
T cd05085         231 WDYKPENRPKFSELQKE  247 (250)
T ss_pred             cccCcccCCCHHHHHHH
Confidence            99999999999999863


No 321
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.90  E-value=1.3e-23  Score=204.80  Aligned_cols=150  Identities=29%  Similarity=0.499  Sum_probs=118.6

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCC--CCCccccccCCcccChhhhcCCCCCCCCcc
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH--RQPLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~--~~~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      .||+.||.|||+.||+|+||+|+||+++.++.++|+|||++.......  ........++..|+|||.+.+ ..++.++|
T Consensus       113 ~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~D  191 (264)
T cd06653         113 RQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISG-EGYGRKAD  191 (264)
T ss_pred             HHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccccccCccccccCCcccccCHhhhcC-CCCCcccc
Confidence            689999999999999999999999999999999999999987543211  111234467889999999876 45788999


Q ss_pred             eeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           80 LWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        80 IWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      +|||||++|+|++|.+||...........+.   ..+...                        .....++..+.++|.+
T Consensus       192 i~slG~il~~l~~g~~p~~~~~~~~~~~~~~---~~~~~~------------------------~~p~~~~~~~~~~i~~  244 (264)
T cd06653         192 VWSVACTVVEMLTEKPPWAEYEAMAAIFKIA---TQPTKP------------------------MLPDGVSDACRDFLKQ  244 (264)
T ss_pred             HHHHHHHHHHHHhCCCCCCccCHHHHHHHHH---cCCCCC------------------------CCCcccCHHHHHHHHH
Confidence            9999999999999999998765555444332   221110                        0113577889999999


Q ss_pred             hcCCCCCCCcCHHHHHhcccc
Q 012191          160 LLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      ||. +|..|||+.++|.|||.
T Consensus       245 ~l~-~~~~r~~~~~~~~~~~~  264 (264)
T cd06653         245 IFV-EEKRRPTAEFLLRHPFV  264 (264)
T ss_pred             Hhc-CcccCccHHHHhcCCCC
Confidence            999 57999999999999983


No 322
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.90  E-value=1.9e-23  Score=209.60  Aligned_cols=146  Identities=24%  Similarity=0.335  Sum_probs=114.5

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC-CccccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.||.|||++||+|+||||+|||++.++.+||+|||++......... ......++..|+|||.+.+ ..++.++||
T Consensus       141 ~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di  219 (314)
T cd05099         141 YQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFD-RVYTHQSDV  219 (314)
T ss_pred             HHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHcc-CCcCccchh
Confidence            58999999999999999999999999999999999999999755422111 1112233467999999876 468899999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++ |..||.+....+.+..+....  ..                          .....++.++.+||.+
T Consensus       220 wslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~--~~--------------------------~~~~~~~~~l~~li~~  271 (314)
T cd05099         220 WSFGILMWEIFTLGGSPYPGIPVEELFKLLREGH--RM--------------------------DKPSNCTHELYMLMRE  271 (314)
T ss_pred             hHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC--CC--------------------------CCCCCCCHHHHHHHHH
Confidence            999999999998 899998877665555443210  00                          0113467889999999


Q ss_pred             hcCCCCCCCcCHHHHHh
Q 012191          160 LLSVEPYKRATASAALA  176 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~  176 (468)
                      ||..||.+|||+.++++
T Consensus       272 cl~~~p~~Rps~~~ll~  288 (314)
T cd05099         272 CWHAVPTQRPTFKQLVE  288 (314)
T ss_pred             HcCCCcccCcCHHHHHH
Confidence            99999999999999985


No 323
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.90  E-value=2.1e-23  Score=202.87  Aligned_cols=147  Identities=22%  Similarity=0.343  Sum_probs=115.8

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.|++|+||+|+||+++..+.++|+|||++...............++..|+|||.+.+ ..++.++|+
T Consensus       108 ~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di  186 (260)
T cd05073         108 SAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINF-GSFTIKSDV  186 (260)
T ss_pred             HHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCCcccccccCHhHhcc-CCcCccccc
Confidence            3689999999999999999999999999999999999999987654332222223344677999999875 457889999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++ |.+||.+.+.......+......                            .....++.++.+++.+
T Consensus       187 ~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~i~~  238 (260)
T cd05073         187 WSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM----------------------------PRPENCPEELYNIMMR  238 (260)
T ss_pred             hHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCC----------------------------CCcccCCHHHHHHHHH
Confidence            999999999998 99999887665555444221100                            0113567889999999


Q ss_pred             hcCCCCCCCcCHHHHHh
Q 012191          160 LLSVEPYKRATASAALA  176 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~  176 (468)
                      ||..||.+||++.+++.
T Consensus       239 ~l~~~p~~Rp~~~~l~~  255 (260)
T cd05073         239 CWKNRPEERPTFEYIQS  255 (260)
T ss_pred             HcccCcccCcCHHHHHH
Confidence            99999999999998874


No 324
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular 
Probab=99.90  E-value=1.1e-23  Score=203.28  Aligned_cols=147  Identities=22%  Similarity=0.330  Sum_probs=111.8

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCc-cccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL-TSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~-~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +.||+.||.|||++||+|+||||+|||++.++.+||+|||++........... .....+..|+|||.+.+ ..++.++|
T Consensus       100 ~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~D  178 (252)
T cd05084         100 VENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNY-GRYSSESD  178 (252)
T ss_pred             HHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCceeecCchhhcC-CCCChHHH
Confidence            36899999999999999999999999999999999999999865432211110 11122456999999876 45788999


Q ss_pred             eeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           80 LWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        80 IWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      ||||||++|+|++ |.+||...+.......+.... .+                           .....++..+.+||.
T Consensus       179 v~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~-~~---------------------------~~~~~~~~~~~~li~  230 (252)
T cd05084         179 VWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGV-RL---------------------------PCPELCPDAVYRLME  230 (252)
T ss_pred             HHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCC-CC---------------------------CCcccCCHHHHHHHH
Confidence            9999999999997 889997666544443332211 00                           001245788999999


Q ss_pred             HhcCCCCCCCcCHHHHHh
Q 012191          159 TLLSVEPYKRATASAALA  176 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~  176 (468)
                      +||+.||.+|||+.++++
T Consensus       231 ~~l~~~p~~Rps~~~~~~  248 (252)
T cd05084         231 RCWEYDPGQRPSFSTVHQ  248 (252)
T ss_pred             HHcCCChhhCcCHHHHHH
Confidence            999999999999999985


No 325
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.90  E-value=3.5e-24  Score=223.69  Aligned_cols=151  Identities=21%  Similarity=0.353  Sum_probs=118.4

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCC-CCCCccccccCCcccChhhhcC--CCCCCCCc
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG-HRQPLTSRVVTLWYRPPELLLG--ATDYGPSV   78 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~-~~~~~~~~~gt~~Y~APE~l~g--~~~~s~~s   78 (468)
                      +||++|+.|||.++|||+|||..|||+.+++.|||+|||++....-. ....+....|...|||||++..  ..+|++.+
T Consensus       495 qQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qS  574 (678)
T KOG0193|consen  495 QQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQS  574 (678)
T ss_pred             HHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCccc
Confidence            79999999999999999999999999999999999999998643321 1223444567888999999864  34689999


Q ss_pred             ceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           79 DLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        79 DIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      ||||||||+|||++|..||........+..+-...+.+                        .+.....+.+.++++|+.
T Consensus       575 DVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~p------------------------d~s~~~s~~pk~mk~Ll~  630 (678)
T KOG0193|consen  575 DVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMP------------------------DLSKIRSNCPKAMKRLLS  630 (678)
T ss_pred             chhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCc------------------------cchhhhccCHHHHHHHHH
Confidence            99999999999999999998544443333332211111                        122333567889999999


Q ss_pred             HhcCCCCCCCcCHHHHHh
Q 012191          159 TLLSVEPYKRATASAALA  176 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~  176 (468)
                      .||.+++++||+..+||.
T Consensus       631 ~C~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  631 DCWKFDREERPLFPQLLS  648 (678)
T ss_pred             HHHhcCcccCccHHHHHH
Confidence            999999999999999986


No 326
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.90  E-value=1.2e-23  Score=208.01  Aligned_cols=146  Identities=22%  Similarity=0.280  Sum_probs=114.1

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC-CccccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.||.|||+.||+|+||||+|||++.++.++|+|||++......... ......++..|+|||.+.+ ..++.++||
T Consensus       134 ~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di  212 (290)
T cd05045         134 WQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFD-HIYTTQSDV  212 (290)
T ss_pred             HHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHcc-CCcchHhHH
Confidence            68999999999999999999999999999999999999998754322111 1122234678999998866 458899999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++ |..||.+.........+......                            .....++.++.+||..
T Consensus       213 ~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~~i~~  264 (290)
T cd05045         213 WSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRM----------------------------ERPENCSEEMYNLMLT  264 (290)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCC----------------------------CCCCCCCHHHHHHHHH
Confidence            999999999998 99999887665544433211100                            0013467889999999


Q ss_pred             hcCCCCCCCcCHHHHHh
Q 012191          160 LLSVEPYKRATASAALA  176 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~  176 (468)
                      ||+.||.+|||+.+++.
T Consensus       265 cl~~~P~~Rp~~~~i~~  281 (290)
T cd05045         265 CWKQEPDKRPTFADISK  281 (290)
T ss_pred             HccCCcccCCCHHHHHH
Confidence            99999999999999985


No 327
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.90  E-value=1.8e-23  Score=201.26  Aligned_cols=147  Identities=24%  Similarity=0.348  Sum_probs=116.6

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++...............++..|+|||.+.+ ..++.++||
T Consensus       109 ~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~-~~~~~~~Di  187 (258)
T smart00219      109 ALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKD-GKFTSKSDV  187 (258)
T ss_pred             HHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccccccccccCCCcccccChHHhcc-CCCCcchhH
Confidence            3689999999999999999999999999999999999999987665432211112236788999999854 568899999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++ |.+||.+.+.......+..... +                           .....++..+.++|.+
T Consensus       188 ~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~-~---------------------------~~~~~~~~~~~~~i~~  239 (258)
T smart00219      188 WSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYR-L---------------------------PKPENCPPEIYKLMLQ  239 (258)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC-C---------------------------CCCCcCCHHHHHHHHH
Confidence            999999999998 8899988766665555432110 0                           0012368889999999


Q ss_pred             hcCCCCCCCcCHHHHHh
Q 012191          160 LLSVEPYKRATASAALA  176 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~  176 (468)
                      ||..||.+|||+.++++
T Consensus       240 ~l~~~p~~Rpt~~~ll~  256 (258)
T smart00219      240 CWAEDPEDRPTFSELVE  256 (258)
T ss_pred             HCcCChhhCcCHHHHHh
Confidence            99999999999999985


No 328
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.90  E-value=1.4e-23  Score=207.02  Aligned_cols=154  Identities=29%  Similarity=0.414  Sum_probs=117.1

Q ss_pred             HHHHHHHHHHHh-CCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHS-RGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs-~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.||.|||+ .||+|+||+|+||+++.++.++|+|||++......   ......++..|+|||.+.+ ..++.++||
T Consensus       110 ~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~---~~~~~~~~~~~~aPE~~~~-~~~~~~~Di  185 (284)
T cd06620         110 VAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS---IADTFVGTSTYMSPERIQG-GKYTVKSDV  185 (284)
T ss_pred             HHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh---ccCccccCcccCCHHHHcc-CCCCccchH
Confidence            589999999997 69999999999999999999999999988644322   1123467899999999876 468889999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHH--------HHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVE--------QLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTT  152 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e--------~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~  152 (468)
                      |||||++|+|++|..||.......        ....+.......+.                  ..      ....++..
T Consensus       186 ~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~------~~~~~~~~  241 (284)
T cd06620         186 WSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPP------------------RL------PSSDFPED  241 (284)
T ss_pred             HHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCC------------------CC------CchhcCHH
Confidence            999999999999999998654321        01111110000000                  00      00136778


Q ss_pred             HHHHHHHhcCCCCCCCcCHHHHHhcccccCC
Q 012191          153 AVNLIETLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       153 l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      +.+||.+||..||.+|||+.++++|+||...
T Consensus       242 ~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~  272 (284)
T cd06620         242 LRDFVDACLLKDPTERPTPQQLCAMPPFIQA  272 (284)
T ss_pred             HHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence            9999999999999999999999999999764


No 329
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.89  E-value=1.2e-23  Score=203.28  Aligned_cols=147  Identities=23%  Similarity=0.351  Sum_probs=115.7

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      .||+.||+|||+.|++|+||||+||+++.++.++|+|||++...............++..|+|||.+.+ ..++.++|||
T Consensus       107 ~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~-~~~~~~~Dv~  185 (256)
T cd05112         107 LDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSF-SKYSSKSDVW  185 (256)
T ss_pred             HHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcccccCCCccchhhcCHhHhcc-CCcChHHHHH
Confidence            589999999999999999999999999999999999999987554322111222334678999999876 4588899999


Q ss_pred             eeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           82 SVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        82 SLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||||++|+|++ |..||........+..+.......                            .....+..+.+|+.+|
T Consensus       186 slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~l~~~~  237 (256)
T cd05112         186 SFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLY----------------------------KPRLASQSVYELMQHC  237 (256)
T ss_pred             HHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCC----------------------------CCCCCCHHHHHHHHHH
Confidence            99999999998 999998877666555543211000                            0012568899999999


Q ss_pred             cCCCCCCCcCHHHHHhc
Q 012191          161 LSVEPYKRATASAALAS  177 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~H  177 (468)
                      |..+|.+|||+.++++.
T Consensus       238 l~~~p~~Rp~~~~~l~~  254 (256)
T cd05112         238 WKERPEDRPSFSLLLHQ  254 (256)
T ss_pred             cccChhhCCCHHHHHHh
Confidence            99999999999999864


No 330
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.89  E-value=1.2e-23  Score=205.20  Aligned_cols=151  Identities=18%  Similarity=0.235  Sum_probs=112.7

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC-CCccccccCCcccChhhhcC------CCCC
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR-QPLTSRVVTLWYRPPELLLG------ATDY   74 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~-~~~~~~~gt~~Y~APE~l~g------~~~~   74 (468)
                      .||+.||+|||++||+||||||+|||++.++.+||+|||++........ .......++..|+|||++..      ...+
T Consensus       107 ~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~  186 (269)
T cd05042         107 CEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQ  186 (269)
T ss_pred             HHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhcccccccccc
Confidence            6899999999999999999999999999999999999999864332211 11122345677999998743      2346


Q ss_pred             CCCcceeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHH
Q 012191           75 GPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTA  153 (468)
Q Consensus        75 s~~sDIWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l  153 (468)
                      +.++|||||||++|+|++ |.+||......+.+..+..........                       ......++..+
T Consensus       187 ~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~  243 (269)
T cd05042         187 TKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPK-----------------------PQLDLKYSDRW  243 (269)
T ss_pred             chhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCC-----------------------CcccccCCHHH
Confidence            789999999999999998 788998777666555553322111000                       01113567888


Q ss_pred             HHHHHHhcCCCCCCCcCHHHHHh
Q 012191          154 VNLIETLLSVEPYKRATASAALA  176 (468)
Q Consensus       154 ~dLL~~mL~~DP~kRpTa~e~L~  176 (468)
                      .+++..|+ .||.+|||+.++++
T Consensus       244 ~~~~~~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         244 YEVMQFCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             HHHHHHHh-cCcccccCHHHHHH
Confidence            99999998 59999999999985


No 331
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.89  E-value=1.5e-23  Score=202.05  Aligned_cols=147  Identities=23%  Similarity=0.338  Sum_probs=113.4

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCc-cccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL-TSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~-~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .|++.||.|||++|++|+||+|+|||++.++.++|+|||++........... .....+..|+|||.+.+ ..++.++||
T Consensus       100 ~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di  178 (251)
T cd05041         100 LDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNY-GRYTSESDV  178 (251)
T ss_pred             HHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcceeccCChHhhcc-CCCCcchhH
Confidence            5899999999999999999999999999999999999999875542211111 11223567999999876 458899999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++ |..||.+.........+......+                            ....++..+.+||.+
T Consensus       179 ~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~li~~  230 (251)
T cd05041         179 WSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMP----------------------------APQLCPEEIYRLMLQ  230 (251)
T ss_pred             HHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCC----------------------------CCccCCHHHHHHHHH
Confidence            999999999998 889998776554444432211000                            012467889999999


Q ss_pred             hcCCCCCCCcCHHHHHhc
Q 012191          160 LLSVEPYKRATASAALAS  177 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~H  177 (468)
                      ||..+|.+|||+.++|+.
T Consensus       231 ~l~~~p~~Rp~~~ell~~  248 (251)
T cd05041         231 CWAYDPENRPSFSEIYNE  248 (251)
T ss_pred             HhccChhhCcCHHHHHHH
Confidence            999999999999999863


No 332
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.89  E-value=2.1e-23  Score=203.19  Aligned_cols=147  Identities=19%  Similarity=0.243  Sum_probs=114.8

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCC--ccccccCCcccChhhhcCCCCCCCCc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP--LTSRVVTLWYRPPELLLGATDYGPSV   78 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~--~~~~~gt~~Y~APE~l~g~~~~s~~s   78 (468)
                      +.||+.||.|||++|++|+||||+|||++.++.+||+|||++..........  .....++..|+|||.+.+ ..++.++
T Consensus       101 ~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~  179 (257)
T cd05115         101 MHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINF-RKFSSRS  179 (257)
T ss_pred             HHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHcc-CCCCchh
Confidence            3689999999999999999999999999999999999999987554322111  112223568999999875 4578899


Q ss_pred             ceeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHH
Q 012191           79 DLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLI  157 (468)
Q Consensus        79 DIWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL  157 (468)
                      |||||||++|+|++ |.+||.+....+....+...  ..+                          ......++++.+||
T Consensus       180 Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~--~~~--------------------------~~~~~~~~~l~~li  231 (257)
T cd05115         180 DVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQG--KRL--------------------------DCPAECPPEMYALM  231 (257)
T ss_pred             hHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC--CCC--------------------------CCCCCCCHHHHHHH
Confidence            99999999999996 99999887766655444221  110                          01124678999999


Q ss_pred             HHhcCCCCCCCcCHHHHHh
Q 012191          158 ETLLSVEPYKRATASAALA  176 (468)
Q Consensus       158 ~~mL~~DP~kRpTa~e~L~  176 (468)
                      .+||..||.+||++.++++
T Consensus       232 ~~c~~~~~~~Rp~~~~i~~  250 (257)
T cd05115         232 KDCWIYKWEDRPNFAKVEE  250 (257)
T ss_pred             HHHcCCChhhCcCHHHHHH
Confidence            9999999999999999875


No 333
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis.  Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.89  E-value=1.2e-23  Score=204.61  Aligned_cols=148  Identities=29%  Similarity=0.476  Sum_probs=114.6

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      .||+.||.|||++||+|+||+|+|||++.++.++|+|||++....... .......+++.|+|||.+.+ ..++.++|+|
T Consensus       113 ~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~-~~~~~~~Di~  190 (267)
T cd08228         113 VQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT-TAAHSLVGTPYYMSPERIHE-NGYNFKSDIW  190 (267)
T ss_pred             HHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchh-HHHhcCCCCccccChhhhcc-CCCCchhhHH
Confidence            689999999999999999999999999999999999999987654322 11223467889999999876 4578899999


Q ss_pred             eeehhhhhhhhcCCCCCCCch-HHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           82 SVGCVFAELLIGKPILQGRTE-VEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        82 SLG~ILyeLltG~~pf~g~~~-~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |+||++|+|++|..||..... ...+.......+.++.                          ....++..+.+||.+|
T Consensus       191 slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~li~~c  244 (267)
T cd08228         191 SLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPL--------------------------PTEHYSEKLRELVSMC  244 (267)
T ss_pred             HHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCC--------------------------ChhhcCHHHHHHHHHH
Confidence            999999999999999865432 2222222222222111                          0124678899999999


Q ss_pred             cCCCCCCCcCHHHHHhc
Q 012191          161 LSVEPYKRATASAALAS  177 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~H  177 (468)
                      |..+|.+|||+.++|+.
T Consensus       245 l~~~p~~Rp~~~~vl~~  261 (267)
T cd08228         245 IYPDPDQRPDIGYVHQI  261 (267)
T ss_pred             CCCCcccCcCHHHHHHH
Confidence            99999999999999963


No 334
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.89  E-value=1.5e-23  Score=205.23  Aligned_cols=145  Identities=23%  Similarity=0.314  Sum_probs=111.7

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||+|||+.|++|+||||+|||++.++.+||+|||++.......  .......+..|+|||++.+ ..++.++||
T Consensus       118 ~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~~--~~~~~~~~~~y~apE~~~~-~~~~~~~Di  194 (270)
T cd05047         118 AADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV--KKTMGRLPVRWMAIESLNY-SVYTTNSDV  194 (270)
T ss_pred             HHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCccccchhh--hccCCCCccccCChHHHcc-CCCCchhhH
Confidence            3689999999999999999999999999999999999999975322110  1111223567999998865 568899999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++ |..||.+.+..+.+..+....  ..                          +....++.++.+||.+
T Consensus       195 ~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~--~~--------------------------~~~~~~~~~~~~li~~  246 (270)
T cd05047         195 WSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGY--RL--------------------------EKPLNCDDEVYDLMRQ  246 (270)
T ss_pred             HHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCC--CC--------------------------CCCCcCCHHHHHHHHH
Confidence            999999999996 999998766555444432100  00                          0112467789999999


Q ss_pred             hcCCCCCCCcCHHHHHh
Q 012191          160 LLSVEPYKRATASAALA  176 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~  176 (468)
                      ||..||.+|||+.+++.
T Consensus       247 ~l~~~p~~Rps~~~il~  263 (270)
T cd05047         247 CWREKPYERPSFAQILV  263 (270)
T ss_pred             HcccChhhCCCHHHHHH
Confidence            99999999999999986


No 335
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.89  E-value=9.7e-24  Score=215.60  Aligned_cols=147  Identities=28%  Similarity=0.478  Sum_probs=109.3

Q ss_pred             EEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcceeeeehhhhhhhhcCCCCCCC------chHHHHH
Q 012191           34 LKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGR------TEVEQLH  107 (468)
Q Consensus        34 vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIWSLG~ILyeLltG~~pf~g~------~~~e~l~  107 (468)
                      |||+|||.|+.+..    .++..+.|..|++||+++|. .|+..+||||++||+|||+||..+|...      .+.+.+.
T Consensus       393 vKIaDlGNACW~~k----hFT~DIQTRQYRapEVllGs-gY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA  467 (590)
T KOG1290|consen  393 VKIADLGNACWVHK----HFTEDIQTRQYRAPEVLLGS-GYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIA  467 (590)
T ss_pred             EEEeeccchhhhhh----hhchhhhhhhccCcceeecC-CCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHH
Confidence            68888888876553    35666789999999999994 6999999999999999999999999532      3577899


Q ss_pred             HHHHHcCCCCchhhhccC-----------CCccccCCCCCCCCchhhhhcC---CCcHHHHHHHHHhcCCCCCCCcCHHH
Q 012191          108 KIFKLCGSPPDDYWKKSK-----------LPHATLFKPQQPYDSSLRETFK---DLPTTAVNLIETLLSVEPYKRATASA  173 (468)
Q Consensus       108 ~i~~~~g~p~~~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~~~---~~s~~l~dLL~~mL~~DP~kRpTa~e  173 (468)
                      .|++++|..|..+....+           +.+...++ ..++...|.+.+.   .-..++.+||.-||+++|++||||.+
T Consensus       468 ~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK-~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~  546 (590)
T KOG1290|consen  468 LIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLK-PWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQ  546 (590)
T ss_pred             HHHHHHhhccHHHHhcCcchHhhhccccceecccccC-CCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHH
Confidence            999999998866533322           11111111 1222333444432   22345889999999999999999999


Q ss_pred             HHhcccccCCCCC
Q 012191          174 ALASEYFSTKPYA  186 (468)
Q Consensus       174 ~L~Hp~F~~~p~~  186 (468)
                      +|+|||++..+.+
T Consensus       547 cl~hPwLn~~~~~  559 (590)
T KOG1290|consen  547 CLKHPWLNPVAGP  559 (590)
T ss_pred             HhcCccccCCCCC
Confidence            9999999976554


No 336
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It 
Probab=99.89  E-value=2.1e-23  Score=204.75  Aligned_cols=146  Identities=20%  Similarity=0.270  Sum_probs=114.0

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCC-ccccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP-LTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~-~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.||+|||+++++|+||||+|||++.++.+||+|||++..+....... .....++..|+|||.+.+ ..++.++||
T Consensus       124 ~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~Di  202 (280)
T cd05043         124 IQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVN-KEYSSASDV  202 (280)
T ss_pred             HHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhc-CCCCchhhH
Confidence            589999999999999999999999999999999999999987553322111 122344677999999876 458899999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|++++ |.+||...+..+....+.... .+.                           ....+++.+.++|.+
T Consensus       203 ~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~---------------------------~~~~~~~~~~~li~~  254 (280)
T cd05043         203 WSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGY-RLA---------------------------QPINCPDELFAVMAC  254 (280)
T ss_pred             HHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCC-CCC---------------------------CCCcCCHHHHHHHHH
Confidence            999999999998 999998766555443332210 000                           012467889999999


Q ss_pred             hcCCCCCCCcCHHHHHh
Q 012191          160 LLSVEPYKRATASAALA  176 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~  176 (468)
                      ||..||++|||+.++++
T Consensus       255 ~l~~~p~~Rps~~~~~~  271 (280)
T cd05043         255 CWALDPEERPSFSQLVQ  271 (280)
T ss_pred             HcCCChhhCCCHHHHHH
Confidence            99999999999999985


No 337
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.89  E-value=1.7e-23  Score=208.93  Aligned_cols=148  Identities=24%  Similarity=0.353  Sum_probs=113.9

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCC-ccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP-LTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~-~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +.||+.||+|||++|++|+||||+|||++.++.++|+|||++.......... .....+++.|+|||.+.+ ..++.++|
T Consensus       146 ~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~D  224 (307)
T cd05098         146 AYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFD-RIYTHQSD  224 (307)
T ss_pred             HHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhcc-CCCCcHHH
Confidence            3689999999999999999999999999999999999999987553221111 112233567999999876 45789999


Q ss_pred             eeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           80 LWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        80 IWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      ||||||++|+|++ |.+||.+....+....+..  +...                          .....++.++.+||.
T Consensus       225 vwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~--~~~~--------------------------~~~~~~~~~~~~li~  276 (307)
T cd05098         225 VWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE--GHRM--------------------------DKPSNCTNELYMMMR  276 (307)
T ss_pred             HHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHc--CCCC--------------------------CCCCcCCHHHHHHHH
Confidence            9999999999998 8899987665444433321  1000                          011346788999999


Q ss_pred             HhcCCCCCCCcCHHHHHhc
Q 012191          159 TLLSVEPYKRATASAALAS  177 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~H  177 (468)
                      +||..+|.+|||+.+++.+
T Consensus       277 ~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         277 DCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             HHcccChhhCcCHHHHHHH
Confidence            9999999999999999874


No 338
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored 
Probab=99.89  E-value=2.7e-23  Score=202.45  Aligned_cols=147  Identities=20%  Similarity=0.329  Sum_probs=115.5

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccc--cccCCcccChhhhcCCCCCCCCc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTS--RVVTLWYRPPELLLGATDYGPSV   78 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~--~~gt~~Y~APE~l~g~~~~s~~s   78 (468)
                      +.|++.||+|||+.||+|+||||+||+++.++.++|+|||++.............  ...+..|+|||.+.+ ..++.++
T Consensus       113 ~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~  191 (268)
T cd05063         113 LRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAY-RKFTSAS  191 (268)
T ss_pred             HHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhc-CCcChHh
Confidence            3689999999999999999999999999999999999999987654322111111  122456999999876 4578999


Q ss_pred             ceeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHH
Q 012191           79 DLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLI  157 (468)
Q Consensus        79 DIWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL  157 (468)
                      |||||||++|+|++ |..||...+..+....+.... ..+                           ....++..+.+|+
T Consensus       192 Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~-~~~---------------------------~~~~~~~~~~~li  243 (268)
T cd05063         192 DVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGF-RLP---------------------------APMDCPSAVYQLM  243 (268)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCC-CCC---------------------------CCCCCCHHHHHHH
Confidence            99999999999997 999998877666665553321 110                           0124678899999


Q ss_pred             HHhcCCCCCCCcCHHHHHh
Q 012191          158 ETLLSVEPYKRATASAALA  176 (468)
Q Consensus       158 ~~mL~~DP~kRpTa~e~L~  176 (468)
                      .+||..||.+||++.++++
T Consensus       244 ~~c~~~~p~~Rp~~~~i~~  262 (268)
T cd05063         244 LQCWQQDRARRPRFVDIVN  262 (268)
T ss_pred             HHHcCCCcccCcCHHHHHH
Confidence            9999999999999999985


No 339
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.89  E-value=2.6e-23  Score=202.24  Aligned_cols=146  Identities=32%  Similarity=0.508  Sum_probs=112.9

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      .||+.||.|||++|++|+||+|+||+++.++.++|+|||++....... .......++..|+|||.+.+ ..++.++|+|
T Consensus       113 ~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~~ape~~~~-~~~~~~~Dv~  190 (267)
T cd08229         113 VQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT-TAAHSLVGTPYYMSPERIHE-NGYNFKSDIW  190 (267)
T ss_pred             HHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCC-cccccccCCcCccCHHHhcC-CCccchhhHH
Confidence            589999999999999999999999999999999999999987654322 22234467889999999866 4578899999


Q ss_pred             eeehhhhhhhhcCCCCCCCchH--HHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           82 SVGCVFAELLIGKPILQGRTEV--EQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        82 SLG~ILyeLltG~~pf~g~~~~--e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      ||||++|+|++|..||.+....  .....+.. ...++                          .....++..+.+||.+
T Consensus       191 slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~--------------------------~~~~~~~~~~~~li~~  243 (267)
T cd08229         191 SLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQ-CDYPP--------------------------LPSDHYSEELRQLVNM  243 (267)
T ss_pred             HHHHHHHHHHhCCCCcccccchHHHHhhhhhc-CCCCC--------------------------CCcccccHHHHHHHHH
Confidence            9999999999999999764432  11111111 11000                          0012467889999999


Q ss_pred             hcCCCCCCCcCHHHHHh
Q 012191          160 LLSVEPYKRATASAALA  176 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~  176 (468)
                      ||..||.+|||+.++++
T Consensus       244 ~l~~~p~~Rpt~~~i~~  260 (267)
T cd08229         244 CINPDPEKRPDITYVYD  260 (267)
T ss_pred             hcCCCcccCCCHHHHHH
Confidence            99999999999998875


No 340
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.89  E-value=2.7e-23  Score=210.40  Aligned_cols=147  Identities=23%  Similarity=0.328  Sum_probs=115.7

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC-CccccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.||.|||++||+|+||||+|||++.++.+||+|||++......... ......++..|+|||++.+ ..++.++||
T Consensus       141 ~qi~~al~~LH~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di  219 (334)
T cd05100         141 YQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFD-RVYTHQSDV  219 (334)
T ss_pred             HHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhcc-CCcCchhhh
Confidence            58999999999999999999999999999999999999998755432111 1122233567999999876 458899999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++ |..||.+.+..+....+....  ..                          .....++..+.+||.+
T Consensus       220 ~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~--~~--------------------------~~~~~~~~~l~~li~~  271 (334)
T cd05100         220 WSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGH--RM--------------------------DKPANCTHELYMIMRE  271 (334)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC--CC--------------------------CCCCCCCHHHHHHHHH
Confidence            999999999998 889998877666555442210  00                          0112467889999999


Q ss_pred             hcCCCCCCCcCHHHHHhc
Q 012191          160 LLSVEPYKRATASAALAS  177 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~H  177 (468)
                      ||..+|.+|||+.++|.+
T Consensus       272 cl~~~p~~Rps~~ell~~  289 (334)
T cd05100         272 CWHAVPSQRPTFKQLVED  289 (334)
T ss_pred             HcccChhhCcCHHHHHHH
Confidence            999999999999999975


No 341
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity 
Probab=99.89  E-value=2.6e-23  Score=202.13  Aligned_cols=142  Identities=22%  Similarity=0.256  Sum_probs=109.0

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCc--------EEEEecCCccccCCCCCCCccccccCCcccChhhhcCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGV--------LKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGAT   72 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~--------vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~   72 (468)
                      +.||+.||+|||+.||+||||||+|||++.++.        ++++|||++......     ....++..|+|||++.+..
T Consensus       106 ~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~  180 (258)
T cd05078         106 AKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPK-----EILLERIPWVPPECIENPQ  180 (258)
T ss_pred             HHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccCCc-----hhccccCCccCchhccCCC
Confidence            369999999999999999999999999987654        699999988654321     2345678899999998756


Q ss_pred             CCCCCcceeeeehhhhhhhhcC-CCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcH
Q 012191           73 DYGPSVDLWSVGCVFAELLIGK-PILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPT  151 (468)
Q Consensus        73 ~~s~~sDIWSLG~ILyeLltG~-~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~  151 (468)
                      .++.++|||||||++|+|++|. +||...+........ ......                             ....+.
T Consensus       181 ~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~-~~~~~~-----------------------------~~~~~~  230 (258)
T cd05078         181 NLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFY-EDRHQL-----------------------------PAPKWT  230 (258)
T ss_pred             CCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHH-HccccC-----------------------------CCCCcH
Confidence            6889999999999999999984 666654443332211 110000                             012456


Q ss_pred             HHHHHHHHhcCCCCCCCcCHHHHHhc
Q 012191          152 TAVNLIETLLSVEPYKRATASAALAS  177 (468)
Q Consensus       152 ~l~dLL~~mL~~DP~kRpTa~e~L~H  177 (468)
                      ++.+||.+||+.||.+|||+.++++.
T Consensus       231 ~~~~li~~~l~~~p~~Rps~~~il~~  256 (258)
T cd05078         231 ELANLINQCMDYEPDFRPSFRAIIRD  256 (258)
T ss_pred             HHHHHHHHHhccChhhCCCHHHHHHh
Confidence            78999999999999999999999864


No 342
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.89  E-value=2.9e-23  Score=207.41  Aligned_cols=147  Identities=22%  Similarity=0.347  Sum_probs=114.2

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC-CccccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.||.|||++||+|+||||+|||++.++.++|+|||++......... ......++..|+|||.+.+ ..++.++||
T Consensus       148 ~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di  226 (302)
T cd05055         148 YQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFN-CVYTFESDV  226 (302)
T ss_pred             HHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhcc-CCCCcHhHH
Confidence            58999999999999999999999999999999999999998755432211 1112345678999999876 457889999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      ||+||++|+|++ |.+||.+....+.+.........+                           ......+..+.+||.+
T Consensus       227 wslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~li~~  279 (302)
T cd05055         227 WSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRM---------------------------AQPEHAPAEIYDIMKT  279 (302)
T ss_pred             HHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcC---------------------------CCCCCCCHHHHHHHHH
Confidence            999999999998 999998766554444332211000                           0012457889999999


Q ss_pred             hcCCCCCCCcCHHHHHh
Q 012191          160 LLSVEPYKRATASAALA  176 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~  176 (468)
                      ||..+|.+|||+.+++.
T Consensus       280 cl~~~p~~Rpt~~ell~  296 (302)
T cd05055         280 CWDADPLKRPTFKQIVQ  296 (302)
T ss_pred             HcCCCchhCcCHHHHHH
Confidence            99999999999999985


No 343
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.89  E-value=4.4e-24  Score=220.90  Aligned_cols=146  Identities=23%  Similarity=0.358  Sum_probs=118.6

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      ++|+.|+.|||.+.|||||||.-||||..+..|||+|||.+......  .....++||..|||||++.. .+++.++|||
T Consensus       219 k~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~--STkMSFaGTVaWMAPEvIrn-ePcsEKVDIw  295 (904)
T KOG4721|consen  219 KGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK--STKMSFAGTVAWMAPEVIRN-EPCSEKVDIW  295 (904)
T ss_pred             HHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhh--hhhhhhhhhHhhhCHHHhhc-CCccccccee
Confidence            68999999999999999999999999999999999999998766543  34567899999999999987 6789999999


Q ss_pred             eeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhc
Q 012191           82 SVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLL  161 (468)
Q Consensus        82 SLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL  161 (468)
                      ||||||||||||..||..-+...++.-    .|....      .+                 .....+|.-++-||+.||
T Consensus       296 SfGVVLWEmLT~EiPYkdVdssAIIwG----VGsNsL------~L-----------------pvPstcP~GfklL~Kqcw  348 (904)
T KOG4721|consen  296 SFGVVLWEMLTGEIPYKDVDSSAIIWG----VGSNSL------HL-----------------PVPSTCPDGFKLLLKQCW  348 (904)
T ss_pred             hhHHHHHHHHhcCCCccccchheeEEe----ccCCcc------cc-----------------cCcccCchHHHHHHHHHH
Confidence            999999999999999976443322111    111100      00                 011357788999999999


Q ss_pred             CCCCCCCcCHHHHHhc
Q 012191          162 SVEPYKRATASAALAS  177 (468)
Q Consensus       162 ~~DP~kRpTa~e~L~H  177 (468)
                      +-.|..||++.++|.|
T Consensus       349 ~sKpRNRPSFrqil~H  364 (904)
T KOG4721|consen  349 NSKPRNRPSFRQILLH  364 (904)
T ss_pred             hcCCCCCccHHHHHHH
Confidence            9999999999999988


No 344
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.89  E-value=4.1e-23  Score=199.85  Aligned_cols=142  Identities=25%  Similarity=0.403  Sum_probs=113.4

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      .||+.||.|||+.|++||||||+||+++.++.++|+|||++......    ......+..|+|||.+.+ ..++.++|+|
T Consensus       107 ~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~----~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~  181 (254)
T cd05083         107 LDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG----VDNSKLPVKWTAPEALKH-KKFSSKSDVW  181 (254)
T ss_pred             HHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceecccc----CCCCCCCceecCHHHhcc-CCcCchhhHH
Confidence            68999999999999999999999999999999999999998654321    122234567999998865 4588899999


Q ss_pred             eeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           82 SVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        82 SLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||||++|+|++ |.+||.+.+..+....+..... +                           .....++..+.+||.+|
T Consensus       182 slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-~---------------------------~~~~~~~~~~~~li~~~  233 (254)
T cd05083         182 SYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYR-M---------------------------EPPEGCPADVYVLMTSC  233 (254)
T ss_pred             HHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCC-C---------------------------CCCCcCCHHHHHHHHHH
Confidence            99999999997 9999988776555444422100 0                           00135678899999999


Q ss_pred             cCCCCCCCcCHHHHHh
Q 012191          161 LSVEPYKRATASAALA  176 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~  176 (468)
                      |..+|.+|||+.+++.
T Consensus       234 l~~~p~~Rp~~~~l~~  249 (254)
T cd05083         234 WETEPKKRPSFHKLRE  249 (254)
T ss_pred             cCCChhhCcCHHHHHH
Confidence            9999999999999985


No 345
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.89  E-value=4.8e-24  Score=231.18  Aligned_cols=148  Identities=24%  Similarity=0.412  Sum_probs=114.8

Q ss_pred             CHHHHHHHHHHHhCC--CeeccCCCCceEECCCCcEEEEecCCccccCCCCCCC--c------cccccCCcccChhhhc-
Q 012191            1 MNQLLHGLEHCHSRG--VLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP--L------TSRVVTLWYRPPELLL-   69 (468)
Q Consensus         1 m~QLL~gL~yLHs~g--IvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~--~------~~~~gt~~Y~APE~l~-   69 (468)
                      |+|+++||.+||...  |||||||-+||||+.+|.+||||||.|+-........  .      .....|+.|++||.+. 
T Consensus       150 f~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDl  229 (738)
T KOG1989|consen  150 FYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDL  229 (738)
T ss_pred             HHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhh
Confidence            579999999999998  9999999999999999999999999986332221100  0      1224589999999873 


Q ss_pred             -CCCCCCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCC
Q 012191           70 -GATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKD  148 (468)
Q Consensus        70 -g~~~~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  148 (468)
                       .....+.++|||+|||+||.||....||.+.....++.--+    ..                           ..++.
T Consensus       230 ysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIlng~Y----~~---------------------------P~~p~  278 (738)
T KOG1989|consen  230 YSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILNGNY----SF---------------------------PPFPN  278 (738)
T ss_pred             hcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEeccc----cC---------------------------CCCcc
Confidence             33567999999999999999999999998653332222111    01                           11246


Q ss_pred             CcHHHHHHHHHhcCCCCCCCcCHHHHHhccc
Q 012191          149 LPTTAVNLIETLLSVEPYKRATASAALASEY  179 (468)
Q Consensus       149 ~s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~  179 (468)
                      ++..+.+||..||+.||.+||++.+++.+-+
T Consensus       279 ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~  309 (738)
T KOG1989|consen  279 YSDRLKDLIRTMLQPNPDERPNIYQVLEEIF  309 (738)
T ss_pred             HHHHHHHHHHHHhccCcccCCCHHHHHHHHH
Confidence            7889999999999999999999999997543


No 346
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.89  E-value=4e-23  Score=201.55  Aligned_cols=148  Identities=22%  Similarity=0.280  Sum_probs=114.9

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC-CccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +.||+.||+|||+.||+|+||||+|||++.++.+||+|||++......... ......+++.|++||.+.+ ..++.++|
T Consensus       119 ~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~sD  197 (273)
T cd05074         119 MIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLAD-NVYTTHSD  197 (273)
T ss_pred             HHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhc-Cccchhhh
Confidence            368999999999999999999999999999999999999998765432211 1122344577999998865 45788999


Q ss_pred             eeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           80 LWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        80 IWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      ||||||++|+|++ |.+||.+.+..+....+.... ...                           ....++..+.+|+.
T Consensus       198 i~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~-~~~---------------------------~~~~~~~~~~~l~~  249 (273)
T cd05074         198 VWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGN-RLK---------------------------QPPDCLEDVYELMC  249 (273)
T ss_pred             hHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCC-cCC---------------------------CCCCCCHHHHHHHH
Confidence            9999999999999 899998776655444443210 000                           00246788999999


Q ss_pred             HhcCCCCCCCcCHHHHHhc
Q 012191          159 TLLSVEPYKRATASAALAS  177 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~H  177 (468)
                      +||..+|.+|||+.+++..
T Consensus       250 ~~l~~~p~~Rps~~~~~~~  268 (273)
T cd05074         250 QCWSPEPKCRPSFQHLRDQ  268 (273)
T ss_pred             HHcCCChhhCcCHHHHHHH
Confidence            9999999999999999864


No 347
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.89  E-value=4.4e-23  Score=203.54  Aligned_cols=147  Identities=23%  Similarity=0.333  Sum_probs=114.0

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC-CCccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR-QPLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~-~~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +.||+.||.|||++|++|+||||+|||++.++.++|+|||++........ ........+..|+|||.+.+ ..++.++|
T Consensus       136 ~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~D  214 (288)
T cd05050         136 AKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFY-NRYTTESD  214 (288)
T ss_pred             HHHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhc-CCCCchhH
Confidence            36899999999999999999999999999999999999999865432211 11122234567999999876 45889999


Q ss_pred             eeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           80 LWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        80 IWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      ||||||++|+|++ |..||.+....+....+....  ..                          .....++..+.+||.
T Consensus       215 v~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~--~~--------------------------~~~~~~~~~l~~li~  266 (288)
T cd05050         215 VWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGN--VL--------------------------SCPDNCPLELYNLMR  266 (288)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC--CC--------------------------CCCCCCCHHHHHHHH
Confidence            9999999999997 888998776665554442210  00                          011246788999999


Q ss_pred             HhcCCCCCCCcCHHHHHh
Q 012191          159 TLLSVEPYKRATASAALA  176 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~  176 (468)
                      +||+.||.+|||+.|+++
T Consensus       267 ~~l~~~p~~Rpt~~el~~  284 (288)
T cd05050         267 LCWSKLPSDRPSFASINR  284 (288)
T ss_pred             HHcccCcccCCCHHHHHH
Confidence            999999999999999875


No 348
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including 
Probab=99.89  E-value=5e-23  Score=204.27  Aligned_cols=153  Identities=18%  Similarity=0.229  Sum_probs=115.0

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC-CccccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.||.|||++|++|+||||+|||++.++.+||+|||++......... ......++..|+|||.+.+ ..++.++||
T Consensus       136 ~~i~~al~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv  214 (295)
T cd05097         136 VQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILL-GKFTTASDV  214 (295)
T ss_pred             HHHHHHHHHHHhcCeeccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhcc-CCcCchhhH
Confidence            68999999999999999999999999999999999999998754332211 1122344678999999876 458999999


Q ss_pred             eeeehhhhhhhh--cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           81 WSVGCVFAELLI--GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        81 WSLG~ILyeLlt--G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |||||++|+|++  +..||...+..+.+..+...........                     .......++..+.+||.
T Consensus       215 wSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~l~~li~  273 (295)
T cd05097         215 WAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQI---------------------YLSQTPLCPSPVFKLMM  273 (295)
T ss_pred             HHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccc---------------------cCCCCCCCCHHHHHHHH
Confidence            999999999988  6788887766555554433211100000                     00111246789999999


Q ss_pred             HhcCCCCCCCcCHHHHHh
Q 012191          159 TLLSVEPYKRATASAALA  176 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~  176 (468)
                      +||..||.+|||+.++++
T Consensus       274 ~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         274 RCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             HHcCCCchhCcCHHHHHH
Confidence            999999999999999975


No 349
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.89  E-value=5.1e-23  Score=194.51  Aligned_cols=152  Identities=41%  Similarity=0.635  Sum_probs=119.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.+|.|||+.||+|+||+|.||+++.++.++|+|||.+.......  ......++..|++||.+.+ ..++.++||
T Consensus        93 ~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~pE~~~~-~~~~~~~Di  169 (244)
T smart00220       93 ARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTPEYMAPEVLLG-KGYGKAVDV  169 (244)
T ss_pred             HHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCcCCCCHHHHcc-CCCCchhhH
Confidence            3689999999999999999999999999999999999999987665431  2344567889999999875 457889999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |+||+++|+|++|..||........+............                         .....++..+.+++.+|
T Consensus       170 ~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~i~~~  224 (244)
T smart00220      170 WSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFP-------------------------PPEWKISPEAKDLIRKL  224 (244)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCc-------------------------cccccCCHHHHHHHHHH
Confidence            99999999999999999874333333222221100000                         00012678899999999


Q ss_pred             cCCCCCCCcCHHHHHhcccc
Q 012191          161 LSVEPYKRATASAALASEYF  180 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F  180 (468)
                      |..||.+||++.++++||||
T Consensus       225 l~~~p~~Rp~~~~~~~~~~~  244 (244)
T smart00220      225 LVKDPEKRLTAEEALQHPFF  244 (244)
T ss_pred             ccCCchhccCHHHHhhCCCC
Confidence            99999999999999999997


No 350
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.89  E-value=2.7e-23  Score=197.26  Aligned_cols=152  Identities=28%  Similarity=0.445  Sum_probs=110.9

Q ss_pred             CHHHHHHHHHHHhCC--CeeccCCCCceEECCCCcEEEEecCCccccCCC---CC-----CCccccccCCcccChhhhcC
Q 012191            1 MNQLLHGLEHCHSRG--VLHRDIKGSNLLVNNEGVLKLADFGLANFSNTG---HR-----QPLTSRVVTLWYRPPELLLG   70 (468)
Q Consensus         1 m~QLL~gL~yLHs~g--IvHrDIKp~NILld~~g~vKL~DFGla~~~~~~---~~-----~~~~~~~gt~~Y~APE~l~g   70 (468)
                      |.+|++||++||+..  ++||||||.|||+.+.+.++|.|||.++...-.   ..     +.......|..|+|||++.-
T Consensus       133 f~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~v  212 (302)
T KOG2345|consen  133 FLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNV  212 (302)
T ss_pred             HHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheec
Confidence            468999999999999  999999999999999999999999998643321   10     11123356899999999853


Q ss_pred             C--CCCCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCC
Q 012191           71 A--TDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKD  148 (468)
Q Consensus        71 ~--~~~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  148 (468)
                      .  ...+.++|||||||+||.|+.|..||.-         ++..-|+..-..           ...+..+.     .-..
T Consensus       213 k~~~ti~ertDIWSLGCtLYa~mf~~sPfe~---------~~~~GgSlaLAv-----------~n~q~s~P-----~~~~  267 (302)
T KOG2345|consen  213 KSHCTITERTDIWSLGCTLYAMMFGESPFER---------IYQQGGSLALAV-----------QNAQISIP-----NSSR  267 (302)
T ss_pred             ccCcccccccchhhhhHHHHHHHHcCCcchH---------HhhcCCeEEEee-----------eccccccC-----CCCC
Confidence            2  3467899999999999999999999952         222112111000           00000000     0123


Q ss_pred             CcHHHHHHHHHhcCCCCCCCcCHHHHHhc
Q 012191          149 LPTTAVNLIETLLSVEPYKRATASAALAS  177 (468)
Q Consensus       149 ~s~~l~dLL~~mL~~DP~kRpTa~e~L~H  177 (468)
                      +++.+.+||..||+.||.+||++.++|.+
T Consensus       268 yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  268 YSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             ccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            78999999999999999999999999965


No 351
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.89  E-value=4.8e-23  Score=205.56  Aligned_cols=148  Identities=19%  Similarity=0.262  Sum_probs=113.7

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC-CccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +.||+.||.|||++||+|+||||+|||++.++.+||+|||++......... ......++..|+|||.+.+ ..++.++|
T Consensus       115 ~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~D  193 (303)
T cd05110         115 CVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHY-RKFTHQSD  193 (303)
T ss_pred             HHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCcccccccCCCccccccCCHHHhcc-CCCChHHH
Confidence            369999999999999999999999999999999999999999765432211 1223345678999999876 45889999


Q ss_pred             eeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           80 LWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        80 IWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      ||||||++|+|++ |..||.+.........+ .....++                           .....+..+.++|.
T Consensus       194 iwslG~~l~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~---------------------------~~~~~~~~~~~li~  245 (303)
T cd05110         194 VWSYGVTIWELMTFGGKPYDGIPTREIPDLL-EKGERLP---------------------------QPPICTIDVYMVMV  245 (303)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HCCCCCC---------------------------CCCCCCHHHHHHHH
Confidence            9999999999997 89999876543332222 2111110                           01235678899999


Q ss_pred             HhcCCCCCCCcCHHHHHhc
Q 012191          159 TLLSVEPYKRATASAALAS  177 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~H  177 (468)
                      .||..||.+|||+.+++..
T Consensus       246 ~c~~~~p~~Rp~~~~l~~~  264 (303)
T cd05110         246 KCWMIDADSRPKFKELAAE  264 (303)
T ss_pred             HHcCCChhhCcCHHHHHHH
Confidence            9999999999999998874


No 352
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.88  E-value=6.2e-23  Score=199.77  Aligned_cols=146  Identities=23%  Similarity=0.349  Sum_probs=113.7

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCC-----cEEEEecCCccccCCCCC-CCccccccCCcccChhhhcCCCCCC
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEG-----VLKLADFGLANFSNTGHR-QPLTSRVVTLWYRPPELLLGATDYG   75 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g-----~vKL~DFGla~~~~~~~~-~~~~~~~gt~~Y~APE~l~g~~~~s   75 (468)
                      .||+.||.|||+.+++|+||+|+||+++.++     .++|+|||++........ .......++..|+|||.+.+ ..++
T Consensus       113 ~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~  191 (269)
T cd05044         113 LDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLD-GKFT  191 (269)
T ss_pred             HHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccccCHHHHcc-CCcc
Confidence            5899999999999999999999999999877     899999999865432211 11122344678999999876 4578


Q ss_pred             CCcceeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHH
Q 012191           76 PSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAV  154 (468)
Q Consensus        76 ~~sDIWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~  154 (468)
                      .++|||||||++|+|++ |..||...+..+....+.... .+                           .....++..+.
T Consensus       192 ~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-~~---------------------------~~~~~~~~~~~  243 (269)
T cd05044         192 TQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGG-RL---------------------------QKPENCPDKIY  243 (269)
T ss_pred             cchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCC-cc---------------------------CCcccchHHHH
Confidence            99999999999999998 999998777665544432110 00                           01134678899


Q ss_pred             HHHHHhcCCCCCCCcCHHHHHh
Q 012191          155 NLIETLLSVEPYKRATASAALA  176 (468)
Q Consensus       155 dLL~~mL~~DP~kRpTa~e~L~  176 (468)
                      +||.+||..+|.+|||+.++++
T Consensus       244 ~li~~~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         244 QLMTNCWAQDPSERPTFDRIQE  265 (269)
T ss_pred             HHHHHHcCCCcccCCCHHHHHH
Confidence            9999999999999999999875


No 353
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.88  E-value=4.7e-23  Score=201.55  Aligned_cols=149  Identities=21%  Similarity=0.356  Sum_probs=115.6

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.||+|+||||+|||++.++.++|+|||++...............++..|+|||.+.+ ..++.++||
T Consensus       123 ~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di  201 (275)
T cd05046         123 CTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQE-DDFSTKSDV  201 (275)
T ss_pred             HHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccccccccCcccccccCCceeEEeecChhhhcc-CCCCchhhH
Confidence            3699999999999999999999999999999999999999986443222222334455778999998876 347889999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++ |..||.+......+..+...  ...   |                      .....++..+.++|.+
T Consensus       202 ~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~--~~~---~----------------------~~~~~~~~~l~~~i~~  254 (275)
T cd05046         202 WSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAG--KLE---L----------------------PVPEGCPSRLYKLMTR  254 (275)
T ss_pred             HHHHHHHHHHHhCCCCCccccchHHHHHHHHcC--CcC---C----------------------CCCCCCCHHHHHHHHH
Confidence            999999999998 88899776655544443211  100   0                      0012467889999999


Q ss_pred             hcCCCCCCCcCHHHHHhc
Q 012191          160 LLSVEPYKRATASAALAS  177 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~H  177 (468)
                      ||+.||.+|||+.+++..
T Consensus       255 ~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         255 CWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             HcCCCcccCCCHHHHHHH
Confidence            999999999999999864


No 354
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.88  E-value=6.3e-23  Score=201.95  Aligned_cols=161  Identities=22%  Similarity=0.306  Sum_probs=112.0

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC--CccccccCCcccChhhhcCCCCCCCCc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ--PLTSRVVTLWYRPPELLLGATDYGPSV   78 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~--~~~~~~gt~~Y~APE~l~g~~~~s~~s   78 (468)
                      +.||+.||.|||++||+|+||||+|||++.++.++|+|||++.........  ......++..|+|||.+.+ ..++.++
T Consensus       113 ~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~-~~~~~~~  191 (283)
T cd05080         113 AQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKE-NKFSYAS  191 (283)
T ss_pred             HHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcc-cCCCccc
Confidence            368999999999999999999999999999999999999998765432211  1122244667999999875 4578999


Q ss_pred             ceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHH-cCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHH
Q 012191           79 DLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKL-CGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLI  157 (468)
Q Consensus        79 DIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~-~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL  157 (468)
                      |||||||++|+|++|..||......  +..+... .+......+..  .....   ..       ......++..+.+|+
T Consensus       192 Di~slG~~l~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~---~~-------~~~~~~~~~~~~~li  257 (283)
T cd05080         192 DVWSFGVTLYELLTHCDSKQSPPKK--FEEMIGPKQGQMTVVRLIE--LLERG---MR-------LPCPKNCPQEVYILM  257 (283)
T ss_pred             ccHHHHHHHHHHHhCCCCCCCCcch--hhhhhcccccccchhhhhh--hhhcC---CC-------CCCCCCCCHHHHHHH
Confidence            9999999999999999998654321  1111110 00000000000  00000   00       001135678999999


Q ss_pred             HHhcCCCCCCCcCHHHHHh
Q 012191          158 ETLLSVEPYKRATASAALA  176 (468)
Q Consensus       158 ~~mL~~DP~kRpTa~e~L~  176 (468)
                      ..||..||.+|||+.+++.
T Consensus       258 ~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         258 KNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             HHHhccChhhCCCHHHHHH
Confidence            9999999999999999985


No 355
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.88  E-value=4.6e-23  Score=228.23  Aligned_cols=102  Identities=33%  Similarity=0.476  Sum_probs=82.9

Q ss_pred             ccCCcccChhhhcCCCCCCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCC
Q 012191           57 VVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQ  136 (468)
Q Consensus        57 ~gt~~Y~APE~l~g~~~~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~  136 (468)
                      +||+.|+|||++.+ ..|+.++||||||||||||++|.+||.+....+.+..+.......+                   
T Consensus       541 vGT~~Y~APE~l~~-~~~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~il~~~~~~p-------------------  600 (669)
T cd05610         541 LGTPDYLAPELLLG-KPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIPWP-------------------  600 (669)
T ss_pred             eeCccccCHHHcCC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCC-------------------
Confidence            45889999999987 4589999999999999999999999999887777766643211110                   


Q ss_pred             CCCchhhhhcCCCcHHHHHHHHHhcCCCCCCCcCHHHHHhcccccCCCC
Q 012191          137 PYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFSTKPY  185 (468)
Q Consensus       137 ~~~~~l~~~~~~~s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~p~  185 (468)
                             .....++..+.++|..||..||.+|||+.++|.||||....+
T Consensus       601 -------~~~~~~~~~~~~~l~~lL~~dP~~R~ta~e~l~h~~~~~~~~  642 (669)
T cd05610         601 -------EGEEKLSVNAQNAIEILLTMDPTKRAGLKELKQHPLFHGVDW  642 (669)
T ss_pred             -------cccccCCHHHHHHHHHHcccChhHCcCHHHHHhCHhhcCCCH
Confidence                   001246788999999999999999999999999999987544


No 356
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.88  E-value=7.7e-23  Score=203.05  Aligned_cols=153  Identities=18%  Similarity=0.271  Sum_probs=113.3

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCc-cccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPL-TSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~-~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.||+|||+.||+|+||||+|||++.++.++|+|||++..+........ ....++..|++||.+.+ ..++.++||
T Consensus       137 ~~i~~al~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~Di  215 (296)
T cd05095         137 TQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILL-GKFTTASDV  215 (296)
T ss_pred             HHHHHHHHHHHHCCeecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhc-CCccchhhh
Confidence            5899999999999999999999999999999999999999875543221111 12234577999998766 458999999


Q ss_pred             eeeehhhhhhhh--cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           81 WSVGCVFAELLI--GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        81 WSLG~ILyeLlt--G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |||||++|||++  |..||...+..+.+.........-.    .       ..+          ......++..+.+||.
T Consensus       216 wSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~----~-------~~~----------~~~~~~~~~~~~~li~  274 (296)
T cd05095         216 WAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQG----R-------QVY----------LPKPALCPDSLYKLML  274 (296)
T ss_pred             hHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhcc----c-------ccc----------CCCCCCCCHHHHHHHH
Confidence            999999999998  7788877666554443322110000    0       000          0011246788999999


Q ss_pred             HhcCCCCCCCcCHHHHHh
Q 012191          159 TLLSVEPYKRATASAALA  176 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~  176 (468)
                      .||+.||.+|||+.++++
T Consensus       275 ~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         275 SCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             HHcCCCcccCCCHHHHHH
Confidence            999999999999999875


No 357
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.88  E-value=8.3e-23  Score=199.94  Aligned_cols=151  Identities=21%  Similarity=0.318  Sum_probs=112.2

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCC-CCCccccccCCcccChhhhcCC------CCC
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH-RQPLTSRVVTLWYRPPELLLGA------TDY   74 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~-~~~~~~~~gt~~Y~APE~l~g~------~~~   74 (468)
                      .||+.||+|||+.+|+|+||||+|||++.++.++|+|||++....... ........++..|+|||++...      ..+
T Consensus       106 ~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~  185 (268)
T cd05086         106 CEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQ  185 (268)
T ss_pred             HHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCC
Confidence            589999999999999999999999999999999999999875322111 1112234678899999987431      235


Q ss_pred             CCCcceeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHH
Q 012191           75 GPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTA  153 (468)
Q Consensus        75 s~~sDIWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l  153 (468)
                      +.++|||||||++|+|++ |.+||....+.+.+..+.......   .           +.+.         ....+++.+
T Consensus       186 ~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~---~-----------~~~~---------~~~~~~~~~  242 (268)
T cd05086         186 TKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVK---L-----------FKPQ---------LELPYSERW  242 (268)
T ss_pred             CCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccc---c-----------CCCc---------cCCCCcHHH
Confidence            778999999999999996 578898777766666654321110   0           0000         112467788


Q ss_pred             HHHHHHhcCCCCCCCcCHHHHHh
Q 012191          154 VNLIETLLSVEPYKRATASAALA  176 (468)
Q Consensus       154 ~dLL~~mL~~DP~kRpTa~e~L~  176 (468)
                      .++|..|| .+|.+|||+.++++
T Consensus       243 ~~l~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         243 YEVLQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             HHHHHHHh-hCcccCCCHHHHHH
Confidence            99999999 78999999999975


No 358
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk 
Probab=99.88  E-value=6.4e-23  Score=198.48  Aligned_cols=143  Identities=23%  Similarity=0.368  Sum_probs=113.5

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||++||+|+||||+||+++.++.++|+|||.+.......    .....+..|+|||.+.+ ..++.++||
T Consensus       108 ~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~----~~~~~~~~~~ape~~~~-~~~~~~~Di  182 (256)
T cd05039         108 ALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ----DSGKLPVKWTAPEALRE-KKFSTKSDV  182 (256)
T ss_pred             HHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEccccccccccccc----ccCCCcccccCchhhcC-CcCCcHHHH
Confidence            3689999999999999999999999999999999999999987653221    12334567999998865 457889999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++ |..||...+..+....+.... .+                           .....+++.+.+||.+
T Consensus       183 ~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~-~~---------------------------~~~~~~~~~~~~li~~  234 (256)
T cd05039         183 WSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGY-RM---------------------------EAPEGCPPEVYKVMKD  234 (256)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCC-CC---------------------------CCccCCCHHHHHHHHH
Confidence            999999999997 999998776555444332210 00                           0012467899999999


Q ss_pred             hcCCCCCCCcCHHHHHh
Q 012191          160 LLSVEPYKRATASAALA  176 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~  176 (468)
                      ||..+|.+|||+.+++.
T Consensus       235 ~l~~~p~~Rp~~~~l~~  251 (256)
T cd05039         235 CWELDPAKRPTFKQLRE  251 (256)
T ss_pred             HhccChhhCcCHHHHHH
Confidence            99999999999999985


No 359
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.88  E-value=1.5e-23  Score=218.90  Aligned_cols=158  Identities=33%  Similarity=0.523  Sum_probs=122.6

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCcccc---------CCCC-----------------------
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFS---------NTGH-----------------------   49 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~---------~~~~-----------------------   49 (468)
                      -+|.+|+++.|..|+|||||||+|||||.+|.|||.||||++-+         ..+.                       
T Consensus       736 AEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL  815 (1034)
T KOG0608|consen  736 AELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVL  815 (1034)
T ss_pred             HHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHH
Confidence            46889999999999999999999999999999999999998521         1110                       


Q ss_pred             ---------CCCccccccCCcccChhhhcCCCCCCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchh
Q 012191           50 ---------RQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDY  120 (468)
Q Consensus        50 ---------~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~  120 (468)
                               .......+||+.|+|||++.. ..|+..||.||.|||||||+.|++||...+..+...++..         
T Consensus       816 ~~ra~~~h~r~~ahslvgt~nyiapevl~r-~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~n---------  885 (1034)
T KOG0608|consen  816 ERRAMRQHQRILAHSLVGTPNYIAPEVLAR-TGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVIN---------  885 (1034)
T ss_pred             HHHHHhhhhhhhhhhhcCCCcccChHHhcc-cCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeee---------
Confidence                     001134588999999999986 5689999999999999999999999988877665544422         


Q ss_pred             hhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhcCCCCCCCcC---HHHHHhcccccCCCCC
Q 012191          121 WKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRAT---ASAALASEYFSTKPYA  186 (468)
Q Consensus       121 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL~~DP~kRpT---a~e~L~Hp~F~~~p~~  186 (468)
                      |..        |..        ..-..+++.++.+||.++. -+++.|..   ++++-.||||+...|.
T Consensus       886 w~~--------~l~--------~~~~~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaHpfFkgIDfs  937 (1034)
T KOG0608|consen  886 WRN--------FLH--------IPYQGNLSKEALDLIQKLC-CSADSRLGKNGADQVKAHPFFKGIDFS  937 (1034)
T ss_pred             hhh--------ccc--------cccccccCHHHHHHHHHHh-cChhhhhcccchhhhhcCccccccchH
Confidence            211        000        0112478999999999975 57888874   7789999999987664


No 360
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.88  E-value=6.6e-23  Score=208.76  Aligned_cols=148  Identities=24%  Similarity=0.313  Sum_probs=112.1

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC-CccccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.||+|||++||+||||||+|||++.++.+||+|||++......... ......++..|+|||.+.+ ..++.++||
T Consensus       186 ~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di  264 (343)
T cd05103         186 FQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFD-RVYTIQSDV  264 (343)
T ss_pred             HHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceECcHHhcC-CCCCchhhH
Confidence            58999999999999999999999999999999999999998754322111 1112234567999999876 458899999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++ |..||.+......+.........+.                           ....+++.+.+++..
T Consensus       265 ~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~  317 (343)
T cd05103         265 WSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR---------------------------APDYTTPEMYQTMLD  317 (343)
T ss_pred             HHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCC---------------------------CCCCCCHHHHHHHHH
Confidence            999999999996 9999977543333222221110000                           001256789999999


Q ss_pred             hcCCCCCCCcCHHHHHhc
Q 012191          160 LLSVEPYKRATASAALAS  177 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~H  177 (468)
                      ||..||.+|||+.++++|
T Consensus       318 cl~~~p~~Rps~~eil~~  335 (343)
T cd05103         318 CWHGEPSQRPTFSELVEH  335 (343)
T ss_pred             HccCChhhCcCHHHHHHH
Confidence            999999999999999986


No 361
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.88  E-value=8.9e-23  Score=199.17  Aligned_cols=146  Identities=23%  Similarity=0.364  Sum_probs=113.8

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC-Cccccc---cCCcccChhhhcCCCCCCCC
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ-PLTSRV---VTLWYRPPELLLGATDYGPS   77 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~-~~~~~~---gt~~Y~APE~l~g~~~~s~~   77 (468)
                      .||+.||.|||++|++|+||||+||+++.++.++|+|||++......... ......   .+..|+|||.+.+ ..++.+
T Consensus       113 ~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~  191 (269)
T cd05065         113 RGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAY-RKFTSA  191 (269)
T ss_pred             HHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCccccccccccCCCcceeecCHhHhcc-Ccccch
Confidence            68999999999999999999999999999999999999998755432211 111111   2457999999875 457899


Q ss_pred             cceeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHH
Q 012191           78 VDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNL  156 (468)
Q Consensus        78 sDIWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dL  156 (468)
                      +|||||||++|||++ |..||.+....+....+......+                            ....++..+.++
T Consensus       192 ~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~----------------------------~~~~~~~~~~~l  243 (269)
T cd05065         192 SDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRLP----------------------------PPMDCPTALHQL  243 (269)
T ss_pred             hhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCC----------------------------CcccCCHHHHHH
Confidence            999999999999886 999998877665555553211100                            012467889999


Q ss_pred             HHHhcCCCCCCCcCHHHHHh
Q 012191          157 IETLLSVEPYKRATASAALA  176 (468)
Q Consensus       157 L~~mL~~DP~kRpTa~e~L~  176 (468)
                      +..||..+|.+|||+.+++.
T Consensus       244 i~~~l~~~p~~Rp~~~~i~~  263 (269)
T cd05065         244 MLDCWQKDRNARPKFGQIVS  263 (269)
T ss_pred             HHHHcCCChhhCcCHHHHHH
Confidence            99999999999999999986


No 362
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.88  E-value=6.3e-23  Score=202.01  Aligned_cols=142  Identities=23%  Similarity=0.308  Sum_probs=109.1

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCC-------cEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEG-------VLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATD   73 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g-------~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~   73 (468)
                      +.||+.||+|||++||+||||||+|||++..+       .++|+|||++......     ....++..|+|||.+.+...
T Consensus       123 ~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~  197 (274)
T cd05076         123 AQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNS  197 (274)
T ss_pred             HHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCccccccccc-----cccccCCcccCchhhcCCCC
Confidence            36999999999999999999999999997643       4899999987543221     23356788999999876566


Q ss_pred             CCCCcceeeeehhhhhhh-hcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHH
Q 012191           74 YGPSVDLWSVGCVFAELL-IGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTT  152 (468)
Q Consensus        74 ~s~~sDIWSLG~ILyeLl-tG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~  152 (468)
                      ++.++|||||||++|+|+ +|.+||.+....+....+ ......                             ....+..
T Consensus       198 ~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~-~~~~~~-----------------------------~~~~~~~  247 (274)
T cd05076         198 LSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERFY-EKKHRL-----------------------------PEPSCKE  247 (274)
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHH-HhccCC-----------------------------CCCCChH
Confidence            899999999999999985 699999876554432221 110000                             0123467


Q ss_pred             HHHHHHHhcCCCCCCCcCHHHHHhc
Q 012191          153 AVNLIETLLSVEPYKRATASAALAS  177 (468)
Q Consensus       153 l~dLL~~mL~~DP~kRpTa~e~L~H  177 (468)
                      +.+||.+||+.+|.+|||+.++|++
T Consensus       248 ~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         248 LATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             HHHHHHHHcccChhhCcCHHHHHHh
Confidence            8999999999999999999999975


No 363
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.88  E-value=1.1e-22  Score=200.44  Aligned_cols=163  Identities=22%  Similarity=0.327  Sum_probs=111.6

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC--CccccccCCcccChhhhcCCCCCCCCc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ--PLTSRVVTLWYRPPELLLGATDYGPSV   78 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~--~~~~~~gt~~Y~APE~l~g~~~~s~~s   78 (468)
                      +.||+.||+|||++||+|+||||+||+++.++.++|+|||++.........  ......++..|+|||.+.+ ..++.++
T Consensus       115 ~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~-~~~~~~~  193 (284)
T cd05079         115 AVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQ-SKFYIAS  193 (284)
T ss_pred             HHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhcc-CCCCccc
Confidence            369999999999999999999999999999999999999998765432211  1123455778999999876 4588899


Q ss_pred             ceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           79 DLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        79 DIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |||||||++|+|+++..++.....     ...+..+....+..... .  ........     .......++..+.+||.
T Consensus       194 Di~slG~il~ellt~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-~--~~~~~~~~-----~~~~~~~~~~~~~~li~  260 (284)
T cd05079         194 DVWSFGVTLYELLTYCDSESSPMT-----LFLKMIGPTHGQMTVTR-L--VRVLEEGK-----RLPRPPNCPEEVYQLMR  260 (284)
T ss_pred             cchhhhhhhhhhhcCCCCCccccc-----hhhhhcccccccccHHH-H--HHHHHcCc-----cCCCCCCCCHHHHHHHH
Confidence            999999999999998766533211     11111111110000000 0  00000000     00112357889999999


Q ss_pred             HhcCCCCCCCcCHHHHHhc
Q 012191          159 TLLSVEPYKRATASAALAS  177 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~H  177 (468)
                      +||+.||.+|||+.+++..
T Consensus       261 ~~l~~~p~~Rpt~~~il~~  279 (284)
T cd05079         261 KCWEFQPSKRTTFQNLIEG  279 (284)
T ss_pred             HHccCCcccCcCHHHHHHH
Confidence            9999999999999999864


No 364
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.88  E-value=7.5e-23  Score=199.71  Aligned_cols=147  Identities=21%  Similarity=0.347  Sum_probs=115.3

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCcc--ccccCCcccChhhhcCCCCCCCCc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLT--SRVVTLWYRPPELLLGATDYGPSV   78 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~--~~~gt~~Y~APE~l~g~~~~s~~s   78 (468)
                      +.||+.||.|||+.|++|+||||+|||++.++.++|+|||++...........+  ...++..|++||.+.+ ..++.++
T Consensus       112 ~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~-~~~~~~~  190 (267)
T cd05066         112 LRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY-RKFTSAS  190 (267)
T ss_pred             HHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhcc-CccCchh
Confidence            368999999999999999999999999999999999999998765433211111  1223567999999876 4588999


Q ss_pred             ceeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHH
Q 012191           79 DLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLI  157 (468)
Q Consensus        79 DIWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL  157 (468)
                      |+|||||++|++++ |..||.+....+....+......+                            ....++..+.+|+
T Consensus       191 Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~li  242 (267)
T cd05066         191 DVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLP----------------------------APMDCPAALHQLM  242 (267)
T ss_pred             hhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcCC----------------------------CCCCCCHHHHHHH
Confidence            99999999999886 999998776665555543221100                            0124678899999


Q ss_pred             HHhcCCCCCCCcCHHHHHh
Q 012191          158 ETLLSVEPYKRATASAALA  176 (468)
Q Consensus       158 ~~mL~~DP~kRpTa~e~L~  176 (468)
                      .+||+.+|.+|||+.++++
T Consensus       243 ~~~l~~~p~~Rp~~~~i~~  261 (267)
T cd05066         243 LDCWQKDRNERPKFEQIVS  261 (267)
T ss_pred             HHHcccCchhCCCHHHHHH
Confidence            9999999999999999985


No 365
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.88  E-value=6.5e-23  Score=198.00  Aligned_cols=141  Identities=24%  Similarity=0.304  Sum_probs=108.2

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCC-------cEEEEecCCccccCCCCCCCccccccCCcccChhhhcCC-C
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEG-------VLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGA-T   72 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g-------~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~-~   72 (468)
                      +.||+.||.|||++||+|+||||+|||++.++       .++|+|||++.....     .....++..|+|||.+.+. .
T Consensus       107 ~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~~~~y~aPE~~~~~~~  181 (259)
T cd05037         107 AKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLS-----REERVERIPWIAPECIRNGQA  181 (259)
T ss_pred             HHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCccccccc-----ccccccCCCccChhhhcCCCC
Confidence            36999999999999999999999999999887       799999999875543     1223456789999998764 3


Q ss_pred             CCCCCcceeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcH
Q 012191           73 DYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPT  151 (468)
Q Consensus        73 ~~s~~sDIWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~  151 (468)
                      .++.++|||||||++|+|++ |..||...+..+....... ....                    +         .....
T Consensus       182 ~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~-~~~~--------------------~---------~~~~~  231 (259)
T cd05037         182 SLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQD-QHRL--------------------P---------MPDCA  231 (259)
T ss_pred             CcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhc-CCCC--------------------C---------CCCch
Confidence            68899999999999999999 5777766543322222110 0000                    0         01126


Q ss_pred             HHHHHHHHhcCCCCCCCcCHHHHHh
Q 012191          152 TAVNLIETLLSVEPYKRATASAALA  176 (468)
Q Consensus       152 ~l~dLL~~mL~~DP~kRpTa~e~L~  176 (468)
                      .+.+||.+||..||.+|||+.++|+
T Consensus       232 ~~~~li~~~l~~~p~~Rpt~~~il~  256 (259)
T cd05037         232 ELANLINQCWTYDPTKRPSFRAILR  256 (259)
T ss_pred             HHHHHHHHHhccChhhCCCHHHHHH
Confidence            7899999999999999999999986


No 366
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.88  E-value=1.3e-22  Score=196.83  Aligned_cols=147  Identities=32%  Similarity=0.513  Sum_probs=112.7

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++....... .......++..|+|||.+.+ ..++.++||
T Consensus       112 ~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~y~apE~~~~-~~~~~~~Di  189 (267)
T cd08224         112 FVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT-TAAHSLVGTPYYMSPERIHE-NGYNFKSDI  189 (267)
T ss_pred             HHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCC-cccceecCCccccCHHHhcc-CCCCchhcH
Confidence            3689999999999999999999999999999999999999987654321 12234467889999999876 458889999


Q ss_pred             eeeehhhhhhhhcCCCCCCCch--HHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQGRTE--VEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~--~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |||||++|+|++|..||.....  ......+...  ..+                + .+        ...++..+.++|.
T Consensus       190 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~----------------~-~~--------~~~~~~~~~~~i~  242 (267)
T cd08224         190 WSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKC--DYP----------------P-LP--------ADHYSEELRDLVS  242 (267)
T ss_pred             HHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcC--CCC----------------C-CC--------hhhcCHHHHHHHH
Confidence            9999999999999999965432  1111111110  000                0 00        1246778999999


Q ss_pred             HhcCCCCCCCcCHHHHHh
Q 012191          159 TLLSVEPYKRATASAALA  176 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~  176 (468)
                      +||..+|.+|||+.++++
T Consensus       243 ~cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         243 RCINPDPEKRPDISYVLQ  260 (267)
T ss_pred             HHcCCCcccCCCHHHHHH
Confidence            999999999999999885


No 367
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.88  E-value=8.8e-23  Score=198.98  Aligned_cols=146  Identities=23%  Similarity=0.408  Sum_probs=117.1

Q ss_pred             HHHHHHHHHHHh-CCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHS-RGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs-~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.||.|||+ .||+|+||+|+|||++.++.++|+|||++.......  ......++..|++||.+.+ ..++.++|+
T Consensus       120 ~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~-~~~~~~~Dv  196 (269)
T cd08528         120 VQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPES--KLTSVVGTILYSCPEIVKN-EPYGEKADV  196 (269)
T ss_pred             HHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccceeeccccc--ccccccCcccCcChhhhcC-CCCchHHHH
Confidence            589999999996 789999999999999999999999999987654432  3345567889999999976 457899999


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||||++|+|++|.+||...........+......+.                           ....++..+.+||.+|
T Consensus       197 ~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~l~~li~~c  249 (269)
T cd08528         197 WAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPL---------------------------PEGMYSEDVTDVITSC  249 (269)
T ss_pred             HHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcC---------------------------CcccCCHHHHHHHHHH
Confidence            9999999999999999987665554444432111110                           0124678899999999


Q ss_pred             cCCCCCCCcCHHHHHhc
Q 012191          161 LSVEPYKRATASAALAS  177 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~H  177 (468)
                      |+.||.+|||+.++..+
T Consensus       250 l~~~p~~Rp~~~e~~~~  266 (269)
T cd08528         250 LTPDAEARPDIIQVSAM  266 (269)
T ss_pred             CCCCCccCCCHHHHHHH
Confidence            99999999999998764


No 368
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.88  E-value=1.6e-22  Score=197.67  Aligned_cols=151  Identities=21%  Similarity=0.276  Sum_probs=110.0

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC-CccccccCCcccChhhhcCC------CCC
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ-PLTSRVVTLWYRPPELLLGA------TDY   74 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~g~------~~~   74 (468)
                      .||+.||+|||+.||+|+||||+||+++.++.++|+|||++......... ......++..|+|||++.+.      ..+
T Consensus       107 ~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~  186 (269)
T cd05087         107 CEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQ  186 (269)
T ss_pred             HHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCC
Confidence            58999999999999999999999999999999999999998644322111 11233567789999998542      135


Q ss_pred             CCCcceeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHH
Q 012191           75 GPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTA  153 (468)
Q Consensus        75 s~~sDIWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l  153 (468)
                      +.++|||||||++|+|++ |.+||......+.............         +     .         ......++..+
T Consensus       187 ~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~---------~-----~---------~~~~~~~~~~~  243 (269)
T cd05087         187 TKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKL---------P-----K---------PRLKLPLSDRW  243 (269)
T ss_pred             CccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCC---------C-----C---------CccCCCCChHH
Confidence            789999999999999996 9999987665544332211100000         0     0         00012356778


Q ss_pred             HHHHHHhcCCCCCCCcCHHHHHh
Q 012191          154 VNLIETLLSVEPYKRATASAALA  176 (468)
Q Consensus       154 ~dLL~~mL~~DP~kRpTa~e~L~  176 (468)
                      .+||..|+ .+|.+|||+.+++.
T Consensus       244 ~~l~~~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         244 YEVMQFCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             HHHHHHHh-cCcccCCCHHHHHH
Confidence            99999998 68999999999984


No 369
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.88  E-value=6.1e-23  Score=220.65  Aligned_cols=153  Identities=29%  Similarity=0.429  Sum_probs=116.0

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECC---CC--cEEEEecCCccccCCCCCC--CccccccCCcccChhhhcCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNN---EG--VLKLADFGLANFSNTGHRQ--PLTSRVVTLWYRPPELLLGATD   73 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~---~g--~vKL~DFGla~~~~~~~~~--~~~~~~gt~~Y~APE~l~g~~~   73 (468)
                      +.|++.||+|||+.+||||||||.||||+.   ++  .++|+|||+++....+...  ......||-.|+|||++.... 
T Consensus       612 l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~-  690 (903)
T KOG1027|consen  612 LSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDR-  690 (903)
T ss_pred             HHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccc-
Confidence            479999999999999999999999999976   34  5899999999887655332  234567899999999998744 


Q ss_pred             CCCCcceeeeehhhhhhhhc-CCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHH
Q 012191           74 YGPSVDLWSVGCVFAELLIG-KPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTT  152 (468)
Q Consensus        74 ~s~~sDIWSLG~ILyeLltG-~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~  152 (468)
                      -..++||||||||+|+.++| ..||...-.  .-.+|...  ..                        ++...-+....+
T Consensus       691 ~~~avDiFslGCvfyYvltgG~HpFGd~~~--R~~NIl~~--~~------------------------~L~~L~~~~d~e  742 (903)
T KOG1027|consen  691 KTQAVDIFSLGCVFYYVLTGGSHPFGDSLE--RQANILTG--NY------------------------TLVHLEPLPDCE  742 (903)
T ss_pred             cCcccchhhcCceEEEEecCCccCCCchHH--hhhhhhcC--cc------------------------ceeeeccCchHH
Confidence            46699999999999999986 889964322  22233221  10                        000000111127


Q ss_pred             HHHHHHHhcCCCCCCCcCHHHHHhcccccC
Q 012191          153 AVNLIETLLSVEPYKRATASAALASEYFST  182 (468)
Q Consensus       153 l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~  182 (468)
                      +.+||.+||++||..||+|.++|.||||=+
T Consensus       743 A~dLI~~ml~~dP~~RPsa~~VL~HPlFW~  772 (903)
T KOG1027|consen  743 AKDLISRMLNPDPQLRPSATDVLNHPLFWD  772 (903)
T ss_pred             HHHHHHHhcCCCcccCCCHHHHhCCCccCC
Confidence            999999999999999999999999999944


No 370
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.88  E-value=1.3e-22  Score=204.77  Aligned_cols=182  Identities=29%  Similarity=0.483  Sum_probs=126.0

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCC-CcEEEEecCCccccCCC-------------------------------
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNE-GVLKLADFGLANFSNTG-------------------------------   48 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~-g~vKL~DFGla~~~~~~-------------------------------   48 (468)
                      |+.|+.||.++|.+|||||||||.|+|++.. +.-.|+|||+|......                               
T Consensus       138 l~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~  217 (418)
T KOG1167|consen  138 LRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATAS  217 (418)
T ss_pred             HHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCccccccccccc
Confidence            4679999999999999999999999999865 66889999998611000                               


Q ss_pred             ---C---------CCCccccccCCcccChhhhcCCCCCCCCcceeeeehhhhhhhhcCCCCC-CCchHHHHHHHHHHcCC
Q 012191           49 ---H---------RQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQ-GRTEVEQLHKIFKLCGS  115 (468)
Q Consensus        49 ---~---------~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIWSLG~ILyeLltG~~pf~-g~~~~e~l~~i~~~~g~  115 (468)
                         .         ...-..+.||+.|+|||++.+...-+.++||||.|+|++.++++..||. ..++...+..|....|.
T Consensus       218 ~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~  297 (418)
T KOG1167|consen  218 KPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGS  297 (418)
T ss_pred             CCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhCh
Confidence               0         0001235789999999999988888999999999999999999998874 44444555555444332


Q ss_pred             C--------Cch--hhhccCCCccc------------cCCCCCCCCchhhhhcCCCcHHHHHHHHHhcCCCCCCCcCHHH
Q 012191          116 P--------PDD--YWKKSKLPHAT------------LFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATASA  173 (468)
Q Consensus       116 p--------~~~--~~~~~~~~~~~------------~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL~~DP~kRpTa~e  173 (468)
                      -        +..  +|.....+...            ...+...+..........++..+.+||.+||..||.+|+||++
T Consensus       298 ~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEe  377 (418)
T KOG1167|consen  298 AEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAED  377 (418)
T ss_pred             HHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHH
Confidence            1        111  34322211100            0000000001112223345678999999999999999999999


Q ss_pred             HHhcccccC
Q 012191          174 ALASEYFST  182 (468)
Q Consensus       174 ~L~Hp~F~~  182 (468)
                      +|.||||..
T Consensus       378 ALkHpFF~~  386 (418)
T KOG1167|consen  378 ALKHPFFDE  386 (418)
T ss_pred             HhcCcCCcc
Confidence            999999984


No 371
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.88  E-value=1.1e-22  Score=212.24  Aligned_cols=147  Identities=21%  Similarity=0.290  Sum_probs=113.2

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC-CccccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ-PLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.||.|||+.||+|+||||+|||++.++.+||+|||++......... ......++..|+|||.+.+ ..++.++||
T Consensus       244 ~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di  322 (400)
T cd05105         244 YQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFD-NLYTTLSDV  322 (400)
T ss_pred             HHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcC-CCCCchhhH
Confidence            68999999999999999999999999999999999999998755432211 1223345678999999876 458899999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|+|++ |..||.+......+.........++                           ....++..+.+||.+
T Consensus       323 wSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~l~~li~~  375 (400)
T cd05105         323 WSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMA---------------------------KPDHATQEVYDIMVK  375 (400)
T ss_pred             HHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCC---------------------------CCccCCHHHHHHHHH
Confidence            999999999997 9999987544333322222110000                           012467889999999


Q ss_pred             hcCCCCCCCcCHHHHHh
Q 012191          160 LLSVEPYKRATASAALA  176 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~  176 (468)
                      ||+.||.+|||+.++.+
T Consensus       376 cl~~dP~~RPt~~~l~~  392 (400)
T cd05105         376 CWNSEPEKRPSFLHLSD  392 (400)
T ss_pred             HCccCHhHCcCHHHHHH
Confidence            99999999999998875


No 372
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.88  E-value=1.7e-22  Score=198.37  Aligned_cols=147  Identities=22%  Similarity=0.297  Sum_probs=114.0

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCC-ccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP-LTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~-~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +.||+.||+|||++||+|+||||+|||++.++.+||+|||++.......... .....++..|+|||.+.. ..++.++|
T Consensus       115 ~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~-~~~~~~~D  193 (279)
T cd05057         115 CVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILH-RIYTHKSD  193 (279)
T ss_pred             HHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhc-CCcCchhh
Confidence            3689999999999999999999999999999999999999997665332111 111223567999998865 46788999


Q ss_pred             eeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           80 LWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        80 IWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      +|||||++|+|++ |..||.+....+....+... ...+                           .....+..+.++|.
T Consensus       194 i~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~---------------------------~~~~~~~~~~~~~~  245 (279)
T cd05057         194 VWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKG-ERLP---------------------------QPPICTIDVYMVLV  245 (279)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCC-CCCC---------------------------CCCCCCHHHHHHHH
Confidence            9999999999998 99999887665544444321 1100                           01235678899999


Q ss_pred             HhcCCCCCCCcCHHHHHh
Q 012191          159 TLLSVEPYKRATASAALA  176 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~  176 (468)
                      +||..||.+|||+.++++
T Consensus       246 ~~l~~~p~~Rp~~~~l~~  263 (279)
T cd05057         246 KCWMIDAESRPTFKELIN  263 (279)
T ss_pred             HHcCCChhhCCCHHHHHH
Confidence            999999999999999875


No 373
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.87  E-value=1.6e-22  Score=215.83  Aligned_cols=166  Identities=27%  Similarity=0.390  Sum_probs=113.6

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCC-------
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATD-------   73 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~-------   73 (468)
                      +.||+.||.|||+.+|+||||||+|||++.++.+||+|||++...............+|+.|+|||.+.....       
T Consensus       315 ~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~  394 (507)
T PLN03224        315 MRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAPAP  394 (507)
T ss_pred             HHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCCCCccchh
Confidence            3689999999999999999999999999999999999999986554332211222344789999998853211       


Q ss_pred             ------------CC--CCcceeeeehhhhhhhhcCC-CCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCC
Q 012191           74 ------------YG--PSVDLWSVGCVFAELLIGKP-ILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPY  138 (468)
Q Consensus        74 ------------~s--~~sDIWSLG~ILyeLltG~~-pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~  138 (468)
                                  |+  ...||||+|||+|+|++|.. ||.+......   .++.+.. ....|.....         ..+
T Consensus       395 ~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~---~~~~~~~-~~~~~r~~~~---------~~~  461 (507)
T PLN03224        395 AMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNT---ELRQYDN-DLNRWRMYKG---------QKY  461 (507)
T ss_pred             hhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhh---HHhhccc-hHHHHHhhcc---------cCC
Confidence                        12  24799999999999999874 6654221111   1110000 0111211100         001


Q ss_pred             CchhhhhcCCCcHHHHHHHHHhcCCCC---CCCcCHHHHHhcccccC
Q 012191          139 DSSLRETFKDLPTTAVNLIETLLSVEP---YKRATASAALASEYFST  182 (468)
Q Consensus       139 ~~~l~~~~~~~s~~l~dLL~~mL~~DP---~kRpTa~e~L~Hp~F~~  182 (468)
                      .   ...+...++.+++||.+||..+|   .+|+|+.|+|+||||..
T Consensus       462 ~---~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~  505 (507)
T PLN03224        462 D---FSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP  505 (507)
T ss_pred             C---cccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence            1   11245678999999999999876   68999999999999964


No 374
>PF07714 Pkinase_Tyr:  Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain;  InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []:   Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction [].      Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases [].  ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.87  E-value=5.8e-23  Score=200.60  Aligned_cols=147  Identities=27%  Similarity=0.396  Sum_probs=112.9

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC-CCccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR-QPLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~-~~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +.||+.||.|||+++|+|+||++.|||++.++.+||+|||++........ ...........|+|||.+.+. .++.++|
T Consensus       109 ~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~ksD  187 (259)
T PF07714_consen  109 AIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDG-EYTKKSD  187 (259)
T ss_dssp             HHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHS-EESHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccc
Confidence            36999999999999999999999999999999999999999876632211 111223456789999998763 4789999


Q ss_pred             eeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           80 LWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        80 IWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |||||+++|||++ |..||...+..+....+..... +                           .....++..+.+||.
T Consensus       188 VysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~-~---------------------------~~~~~~~~~~~~li~  239 (259)
T PF07714_consen  188 VYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQR-L---------------------------PIPDNCPKDIYSLIQ  239 (259)
T ss_dssp             HHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEE-T---------------------------TSBTTSBHHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccccc-c---------------------------eeccchhHHHHHHHH
Confidence            9999999999999 7899988877776666633211 1                           011357889999999


Q ss_pred             HhcCCCCCCCcCHHHHHh
Q 012191          159 TLLSVEPYKRATASAALA  176 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~  176 (468)
                      .||..||.+|||+.++++
T Consensus       240 ~C~~~~p~~RPs~~~i~~  257 (259)
T PF07714_consen  240 QCWSHDPEKRPSFQEILQ  257 (259)
T ss_dssp             HHT-SSGGGS--HHHHHH
T ss_pred             HHcCCChhhCcCHHHHHh
Confidence            999999999999999985


No 375
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.87  E-value=1.2e-22  Score=227.24  Aligned_cols=149  Identities=25%  Similarity=0.357  Sum_probs=113.5

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCC-----------------CCCccccccCCcccC
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH-----------------RQPLTSRVVTLWYRP   64 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~-----------------~~~~~~~~gt~~Y~A   64 (468)
                      .||+.||+|||++||+||||||+|||++.++.++|+|||++.......                 .......+||+.|+|
T Consensus       120 ~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmA  199 (932)
T PRK13184        120 HKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMA  199 (932)
T ss_pred             HHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCC
Confidence            589999999999999999999999999999999999999997652110                 001123468999999


Q ss_pred             hhhhcCCCCCCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhh
Q 012191           65 PELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRE  144 (468)
Q Consensus        65 PE~l~g~~~~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~  144 (468)
                      ||.+.+ ..++.++|||||||++|+|++|.+||.+..........  ....+. .                       ..
T Consensus       200 PE~l~g-~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~--~i~~P~-~-----------------------~~  252 (932)
T PRK13184        200 PERLLG-VPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRD--VILSPI-E-----------------------VA  252 (932)
T ss_pred             HHHhcC-CCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhh--hccChh-h-----------------------cc
Confidence            999876 45789999999999999999999999875443222111  111110 0                       01


Q ss_pred             hcCCCcHHHHHHHHHhcCCCCCCCcCHHHHHhc
Q 012191          145 TFKDLPTTAVNLIETLLSVEPYKRATASAALAS  177 (468)
Q Consensus       145 ~~~~~s~~l~dLL~~mL~~DP~kRpTa~e~L~H  177 (468)
                      .+..+++.+.+++.+||..||.+|++..+.|.+
T Consensus       253 p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~  285 (932)
T PRK13184        253 PYREIPPFLSQIAMKALAVDPAERYSSVQELKQ  285 (932)
T ss_pred             ccccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            123678889999999999999999887776654


No 376
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.87  E-value=6.8e-23  Score=196.20  Aligned_cols=155  Identities=23%  Similarity=0.344  Sum_probs=122.0

Q ss_pred             HHHHHHHHHhC-CCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCC-CCCCCccee
Q 012191            4 LLHGLEHCHSR-GVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGAT-DYGPSVDLW   81 (468)
Q Consensus         4 LL~gL~yLHs~-gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~-~~s~~sDIW   81 (468)
                      .+.||.||-.. .||||||||+|||++..|.+||||||.+-.+...  ...+...|...|+|||.+.... .|+.++|+|
T Consensus       176 tV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S--iAkT~daGCrpYmAPERi~p~~~gyDiRSDvW  253 (361)
T KOG1006|consen  176 TVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS--IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVW  253 (361)
T ss_pred             ehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHH--HHhhhccCCccccChhccCCccCCcchhhhhh
Confidence            36799999864 8999999999999999999999999998654432  2235567888999999986543 489999999


Q ss_pred             eeehhhhhhhhcCCCCCCCch-HHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           82 SVGCVFAELLIGKPILQGRTE-VEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        82 SLG~ILyeLltG~~pf~g~~~-~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      |||++|||+.||..||.+-+. .+++..+.  .|.||.-..                     ....-+++..+..+|..|
T Consensus       254 SLGITL~EvAtG~fPyr~w~svfeql~~Vv--~gdpp~l~~---------------------~~~~~~~s~~~~~fintC  310 (361)
T KOG1006|consen  254 SLGITLYEVATGNFPYRKWDSVFEQLCQVV--IGDPPILLF---------------------DKECVHYSFSMVRFINTC  310 (361)
T ss_pred             hhcceEeeeecCCCCcchHHHHHHHHHHHH--cCCCCeecC---------------------cccccccCHHHHHHHHHH
Confidence            999999999999999987543 34444443  244432111                     011125788999999999


Q ss_pred             cCCCCCCCcCHHHHHhcccccCC
Q 012191          161 LSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      |..|-..||...+++.+||++..
T Consensus       311 l~Kd~~~Rpky~~Lk~~~fyr~y  333 (361)
T KOG1006|consen  311 LIKDRSDRPKYDDLKKFPFYRMY  333 (361)
T ss_pred             hhcccccCcchhhhhcCchhhhh
Confidence            99999999999999999999864


No 377
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.87  E-value=3.2e-22  Score=196.83  Aligned_cols=164  Identities=20%  Similarity=0.265  Sum_probs=110.1

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCC--ccccccCCcccChhhhcCCCCCCCCc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP--LTSRVVTLWYRPPELLLGATDYGPSV   78 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~--~~~~~gt~~Y~APE~l~g~~~~s~~s   78 (468)
                      +.||+.||.|||++||+|+||||+|||++.++.++|+|||++..........  .....++..|+|||.+.+ ..++.++
T Consensus       114 ~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~  192 (284)
T cd05081         114 ASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTE-SKFSVAS  192 (284)
T ss_pred             HHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhcc-CCcChHH
Confidence            3689999999999999999999999999999999999999997654322111  111223456999999876 4588999


Q ss_pred             ceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           79 DLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        79 DIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |||||||++|||++|..++...... ....+.... ......+....     .......     ......++..+.+||.
T Consensus       193 Di~slG~~l~el~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~-----~~~~~~~-----~~~~~~~~~~~~~li~  260 (284)
T cd05081         193 DVWSFGVVLYELFTYSDKSCSPPAE-FMRMMGNDK-QGQMIVYHLIE-----LLKNNGR-----LPAPPGCPAEIYAIMK  260 (284)
T ss_pred             HHHHHHHHHHHHhhcCCcCCCcchh-hhhhccccc-ccccchHHHHH-----HHhcCCc-----CCCCCCCCHHHHHHHH
Confidence            9999999999999987766433211 111110000 00000000000     0000000     0112357889999999


Q ss_pred             HhcCCCCCCCcCHHHHHhc
Q 012191          159 TLLSVEPYKRATASAALAS  177 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~H  177 (468)
                      +||..+|.+|||+.+++..
T Consensus       261 ~cl~~~p~~Rpt~~ei~~~  279 (284)
T cd05081         261 ECWNNDPSQRPSFSELALQ  279 (284)
T ss_pred             HHccCChhhCCCHHHHHHH
Confidence            9999999999999999863


No 378
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.87  E-value=1.3e-23  Score=203.91  Aligned_cols=155  Identities=27%  Similarity=0.467  Sum_probs=123.5

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      +..|.||+|||...-+|||||..|||++.+|..||+|||.|-.+...- ......+||+.|||||++.. ..|+..+|||
T Consensus       136 ~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM-AKRNTVIGTPFWMAPEVI~E-IGY~~~ADIW  213 (502)
T KOG0574|consen  136 RDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM-AKRNTVIGTPFWMAPEVIEE-IGYDTKADIW  213 (502)
T ss_pred             HHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhH-HhhCccccCcccccHHHHHH-hccchhhhHh
Confidence            567899999999999999999999999999999999999986554321 22346689999999999976 5689999999


Q ss_pred             eeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhc
Q 012191           82 SVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLL  161 (468)
Q Consensus        82 SLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL  161 (468)
                      |||+...||.-|+|||..-....   .|+-.--.||..|.                       .....+.++-|||+.||
T Consensus       214 SLGITaIEMAEG~PPYsDIHPMR---AIFMIPT~PPPTF~-----------------------KPE~WS~~F~DFi~~CL  267 (502)
T KOG0574|consen  214 SLGITAIEMAEGRPPYSDIHPMR---AIFMIPTKPPPTFK-----------------------KPEEWSSEFNDFIRSCL  267 (502)
T ss_pred             hhcchhhhhhcCCCCcccccccc---eeEeccCCCCCCCC-----------------------ChHhhhhHHHHHHHHHh
Confidence            99999999999999997644332   22222222222211                       11235778999999999


Q ss_pred             CCCCCCCcCHHHHHhcccccCCC
Q 012191          162 SVEPYKRATASAALASEYFSTKP  184 (468)
Q Consensus       162 ~~DP~kRpTa~e~L~Hp~F~~~p  184 (468)
                      ...|++|.||.++++|+|.++.+
T Consensus       268 iK~PE~R~TA~~L~~H~FiknA~  290 (502)
T KOG0574|consen  268 IKKPEERKTALRLCEHTFIKNAP  290 (502)
T ss_pred             cCCHHHHHHHHHHhhhhhhcCCC
Confidence            99999999999999999998754


No 379
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.86  E-value=6e-22  Score=193.88  Aligned_cols=151  Identities=21%  Similarity=0.348  Sum_probs=110.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC--CccccccCCcccChhhhcCCCCCCCCc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ--PLTSRVVTLWYRPPELLLGATDYGPSV   78 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~--~~~~~~gt~~Y~APE~l~g~~~~s~~s   78 (468)
                      +.||+.||+|||+.||+|+||||+||+++.++.++|+|||++.........  ......++..|++||.+.+ ..++.++
T Consensus       115 ~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~  193 (284)
T cd05038         115 SSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRT-SKFSSAS  193 (284)
T ss_pred             HHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHcc-CCCCccc
Confidence            368999999999999999999999999999999999999999766532111  1112234567999998876 4578899


Q ss_pred             ceeeeehhhhhhhhcCCCCCCCchHHH-----------HHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcC
Q 012191           79 DLWSVGCVFAELLIGKPILQGRTEVEQ-----------LHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFK  147 (468)
Q Consensus        79 DIWSLG~ILyeLltG~~pf~g~~~~e~-----------l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  147 (468)
                      |||||||++|+|++|..||........           ...+...+....                   .     .....
T Consensus       194 Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~-----~~~~~  249 (284)
T cd05038         194 DVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGE-------------------R-----LPRPP  249 (284)
T ss_pred             chHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCC-------------------c-----CCCCc
Confidence            999999999999999988865322110           011111000000                   0     00012


Q ss_pred             CCcHHHHHHHHHhcCCCCCCCcCHHHHHh
Q 012191          148 DLPTTAVNLIETLLSVEPYKRATASAALA  176 (468)
Q Consensus       148 ~~s~~l~dLL~~mL~~DP~kRpTa~e~L~  176 (468)
                      .++..+.+||.+||..||.+|||+.++++
T Consensus       250 ~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         250 SCPDEVYDLMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             cCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            45688999999999999999999999985


No 380
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.86  E-value=5.8e-22  Score=207.00  Aligned_cols=148  Identities=21%  Similarity=0.265  Sum_probs=115.1

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC-CCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR-QPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~-~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.||.|||+.||+|+||||+|||++.++.+||+|||++........ .......++..|+|||.+.+ ..++.++||
T Consensus       246 ~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv  324 (401)
T cd05107         246 YQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFN-NLYTTLSDV  324 (401)
T ss_pred             HHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcC-CCCCcHhHH
Confidence            5899999999999999999999999999999999999999875432211 11223356788999999876 457899999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||++|||++ |..||......+.+.........++                           ....++..+.+||.+
T Consensus       325 wslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~---------------------------~p~~~~~~l~~li~~  377 (401)
T cd05107         325 WSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMA---------------------------KPAHASDEIYEIMQK  377 (401)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCC---------------------------CCCCCCHHHHHHHHH
Confidence            999999999998 8899987655554433322110000                           012467889999999


Q ss_pred             hcCCCCCCCcCHHHHHhc
Q 012191          160 LLSVEPYKRATASAALAS  177 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~H  177 (468)
                      ||..||.+||++.++|..
T Consensus       378 cl~~~P~~RPs~~ell~~  395 (401)
T cd05107         378 CWEEKFEIRPDFSQLVHL  395 (401)
T ss_pred             HcCCChhHCcCHHHHHHH
Confidence            999999999999999864


No 381
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.85  E-value=1.3e-21  Score=192.19  Aligned_cols=153  Identities=27%  Similarity=0.460  Sum_probs=120.7

Q ss_pred             HHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcceee
Q 012191            3 QLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWS   82 (468)
Q Consensus         3 QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIWS   82 (468)
                      .|+.||.|||++||++||||.+|+|++..|.+||.|+|+++.--. ........+||+.|+|||++.| ..|+.++|.|+
T Consensus       359 ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~-~gd~tstfcgtpnyiapeilrg-eeygfsvdwwa  436 (593)
T KOG0695|consen  359 EICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG-PGDTTSTFCGTPNYIAPEILRG-EEYGFSVDWWA  436 (593)
T ss_pred             HHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCC-CCcccccccCCCcccchhhhcc-cccCceehHHH
Confidence            588999999999999999999999999999999999999864322 2233456799999999999988 57999999999


Q ss_pred             eehhhhhhhhcCCCCCC--------CchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHH
Q 012191           83 VGCVFAELLIGKPILQG--------RTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAV  154 (468)
Q Consensus        83 LG~ILyeLltG~~pf~g--------~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~  154 (468)
                      ||++++||+.|+.||.-        +++.-.+.-|++.....|                             ..++-.+.
T Consensus       437 lgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqirip-----------------------------rslsvkas  487 (593)
T KOG0695|consen  437 LGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIP-----------------------------RSLSVKAS  487 (593)
T ss_pred             HHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccccc-----------------------------ceeehhhH
Confidence            99999999999999952        122222333322111111                             24566678


Q ss_pred             HHHHHhcCCCCCCCcC------HHHHHhcccccCCCCC
Q 012191          155 NLIETLLSVEPYKRAT------ASAALASEYFSTKPYA  186 (468)
Q Consensus       155 dLL~~mL~~DP~kRpT------a~e~L~Hp~F~~~p~~  186 (468)
                      .+|...|+.||.+|..      ..++-.|+||+...|.
T Consensus       488 ~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~idwd  525 (593)
T KOG0695|consen  488 HVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSIDWD  525 (593)
T ss_pred             HHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCCHH
Confidence            8999999999999964      6889999999987764


No 382
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.83  E-value=3.1e-21  Score=210.00  Aligned_cols=164  Identities=28%  Similarity=0.417  Sum_probs=129.2

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCC---CCccccccCCcccChhhhcCCCCCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHR---QPLTSRVVTLWYRPPELLLGATDYGPS   77 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~---~~~~~~~gt~~Y~APE~l~g~~~~s~~   77 (468)
                      |+||+.||.|||+.||.|||||++||++..+|.+||+|||.+..+.....   ......+|+-.|+|||++.+.......
T Consensus       426 fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~  505 (601)
T KOG0590|consen  426 FKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRA  505 (601)
T ss_pred             HHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcch
Confidence            58999999999999999999999999999999999999999976654433   344567889999999999886655668


Q ss_pred             cceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHH
Q 012191           78 VDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLI  157 (468)
Q Consensus        78 sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL  157 (468)
                      +||||+|+|+..|++|+.||.-....+.......                    ...+..........+..++...+.+|
T Consensus       506 vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~lp~~~~~~~  565 (601)
T KOG0590|consen  506 VDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNN--------------------YSDQRNIFEGPNRLLSLLPRETRIII  565 (601)
T ss_pred             hhhhhccceEEEEecCCCccccccccccchhhhc--------------------cccccccccChHHHHHhchhhHHHHH
Confidence            9999999999999999999965433222110000                    00011112233445567899999999


Q ss_pred             HHhcCCCCCCCcCHHHHHhcccccCCC
Q 012191          158 ETLLSVEPYKRATASAALASEYFSTKP  184 (468)
Q Consensus       158 ~~mL~~DP~kRpTa~e~L~Hp~F~~~p  184 (468)
                      .+||++||.+|+|+++||+.+||+...
T Consensus       566 ~~~l~~~P~~R~ti~~i~~d~W~~~i~  592 (601)
T KOG0590|consen  566 YRMLQLDPTKRITIEQILNDEWIRSIE  592 (601)
T ss_pred             HHHccCChhheecHHHHhhChHhhhcc
Confidence            999999999999999999999999754


No 383
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.82  E-value=2.6e-20  Score=188.43  Aligned_cols=156  Identities=24%  Similarity=0.427  Sum_probs=118.5

Q ss_pred             CHHHHHHHHHHHhC--CCeeccCCCCceEECC---CCcEEEEecCCccccCCCCCC------CccccccCCcccChhhhc
Q 012191            1 MNQLLHGLEHCHSR--GVLHRDIKGSNLLVNN---EGVLKLADFGLANFSNTGHRQ------PLTSRVVTLWYRPPELLL   69 (468)
Q Consensus         1 m~QLL~gL~yLHs~--gIvHrDIKp~NILld~---~g~vKL~DFGla~~~~~~~~~------~~~~~~gt~~Y~APE~l~   69 (468)
                      +.||+.||.||.+.  -|||-||||.|||+.+   -|.+||.|||++..+......      ......||.||+|||.+.
T Consensus       574 iMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFv  653 (775)
T KOG1151|consen  574 IMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFV  653 (775)
T ss_pred             HHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceee
Confidence            46999999999987  4999999999999843   367999999999887654322      122457899999999985


Q ss_pred             C---CCCCCCCcceeeeehhhhhhhhcCCCCCCCchHHHH---HHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhh
Q 012191           70 G---ATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQL---HKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLR  143 (468)
Q Consensus        70 g---~~~~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l---~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~  143 (468)
                      -   ....+.++||||+|||||.++.|+.||..+.....+   .-|++..    +           ..|           
T Consensus       654 VgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAt----E-----------VqF-----------  707 (775)
T KOG1151|consen  654 VGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKAT----E-----------VQF-----------  707 (775)
T ss_pred             cCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcce----e-----------ccC-----------
Confidence            2   345688999999999999999999999754332211   1111100    0           000           


Q ss_pred             hhcCCCcHHHHHHHHHhcCCCCCCCcCHHHHHhcccccC
Q 012191          144 ETFKDLPTTAVNLIETLLSVEPYKRATASAALASEYFST  182 (468)
Q Consensus       144 ~~~~~~s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~  182 (468)
                      ..-+.++.++++||++||.+.-++|+.+.++..||||.-
T Consensus       708 P~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllP  746 (775)
T KOG1151|consen  708 PPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLP  746 (775)
T ss_pred             CCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccc
Confidence            111457899999999999999999999999999999864


No 384
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.82  E-value=2.5e-20  Score=208.13  Aligned_cols=146  Identities=23%  Similarity=0.351  Sum_probs=120.1

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCcccc-ccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSR-VVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~-~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.|+.||+++++|||||-..|+||+....+||+|||+|+.+........... .-...|||||.+.. ..++.++||
T Consensus       809 ~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d-~iFtskSDv  887 (1025)
T KOG1095|consen  809 LDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKD-GIFTSKSDV  887 (1025)
T ss_pred             HHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhh-cccccccch
Confidence            4899999999999999999999999999999999999999984433322222222 22467999999986 569999999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      |||||+|||+++ |..||.+....+.+....+.-..++                            ...++..+.+||..
T Consensus       888 WsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL~~----------------------------P~~CP~~ly~lM~~  939 (1025)
T KOG1095|consen  888 WSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRLDP----------------------------PSYCPEKLYQLMLQ  939 (1025)
T ss_pred             hhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCccCC----------------------------CCCCChHHHHHHHH
Confidence            999999999998 8999999998888876655321111                            13578899999999


Q ss_pred             hcCCCCCCCcCHHHHHh
Q 012191          160 LLSVEPYKRATASAALA  176 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~  176 (468)
                      ||+.+|++||+...+++
T Consensus       940 CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  940 CWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             HccCChhhCccHHHHHh
Confidence            99999999999999997


No 385
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.81  E-value=2.4e-20  Score=201.58  Aligned_cols=155  Identities=27%  Similarity=0.446  Sum_probs=125.2

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCC----CCCCC
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGAT----DYGPS   77 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~----~~s~~   77 (468)
                      +.+|.||.|||.+.++|||||..|||++.++.|||+|||.+....... ..-...+||++|||||++....    .|+..
T Consensus       130 re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~-grRnT~iGtP~WMAPEViac~e~~d~tyd~R  208 (953)
T KOG0587|consen  130 REILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTV-GRRNTFIGTPYWMAPEVIACDESPDATYDYR  208 (953)
T ss_pred             HHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeeeeccc-ccccCcCCCcccccceeeecccCCCCCcccc
Confidence            678999999999999999999999999999999999999987666433 2334568999999999996532    36778


Q ss_pred             cceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHH
Q 012191           78 VDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLI  157 (468)
Q Consensus        78 sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL  157 (468)
                      +|+||||++..||--|.||+...-....+..|   ...||...                       ..+...+..+.+||
T Consensus       209 ~D~WsLGITaIEladG~PPl~DmHPmraLF~I---pRNPPPkL-----------------------krp~kWs~~FndFI  262 (953)
T KOG0587|consen  209 SDLWSLGITAIEMAEGAPPLCDMHPMRALFLI---PRNPPPKL-----------------------KRPKKWSKKFNDFI  262 (953)
T ss_pred             cchhhccceeehhcCCCCCccCcchhhhhccC---CCCCCccc-----------------------cchhhHHHHHHHHH
Confidence            99999999999999999999776555444433   22222111                       11245678899999


Q ss_pred             HHhcCCCCCCCcCHHHHHhcccccCC
Q 012191          158 ETLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       158 ~~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      ..||..|..+||+..++|+|||.+..
T Consensus       263 s~cL~Kd~e~RP~~~~ll~hpFi~e~  288 (953)
T KOG0587|consen  263 STCLVKDYEQRPSTEELLKHPFITEQ  288 (953)
T ss_pred             HHHHhhccccCcchhhhccCCccccc
Confidence            99999999999999999999999843


No 386
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.80  E-value=5.4e-20  Score=199.26  Aligned_cols=145  Identities=25%  Similarity=0.359  Sum_probs=121.4

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCcc-ccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLT-SRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~-~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.|++||-++.+|||||-..|+||..+-.|||+|||+++........... .......|||||.++. ..|+.++||
T Consensus       610 ~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly-~kFTteSDV  688 (774)
T KOG1026|consen  610 TQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILY-GKFTTESDV  688 (774)
T ss_pred             HHHHHHHHHHHhCcccccchhhhhceeccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhc-Ccccchhhh
Confidence            69999999999999999999999999999999999999999755443222222 2233678999999975 579999999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      ||+||+|||+++ |..||.|-++.+.+..|...--                            -+...++|.++.+||..
T Consensus       689 Ws~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~l----------------------------L~~Pe~CP~~vY~LM~~  740 (774)
T KOG1026|consen  689 WSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQL----------------------------LSCPENCPTEVYSLMLE  740 (774)
T ss_pred             hhhhhhhhhhhccccCcccccchHHHHHHHHcCCc----------------------------ccCCCCCCHHHHHHHHH
Confidence            999999999997 9999999999999988854211                            12224789999999999


Q ss_pred             hcCCCCCCCcCHHHHH
Q 012191          160 LLSVEPYKRATASAAL  175 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L  175 (468)
                      ||+.+|.+||++.||-
T Consensus       741 CW~~~P~~RPsF~eI~  756 (774)
T KOG1026|consen  741 CWNENPKRRPSFKEIH  756 (774)
T ss_pred             HhhcCcccCCCHHHHH
Confidence            9999999999998874


No 387
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.80  E-value=1e-19  Score=187.46  Aligned_cols=157  Identities=27%  Similarity=0.399  Sum_probs=106.8

Q ss_pred             HHHHHHHHHHHhCC---CeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCcccc-ccCCcccChhhhcCCCCCCCC
Q 012191            2 NQLLHGLEHCHSRG---VLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSR-VVTLWYRPPELLLGATDYGPS   77 (468)
Q Consensus         2 ~QLL~gL~yLHs~g---IvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~-~gt~~Y~APE~l~g~~~~s~~   77 (468)
                      .+++.||+|||...   |||||||++|||+|.+...||+|||+|....... ...... .||..|++||.+.. ...+.+
T Consensus       181 ~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~-~~~~~~~~gt~gY~~PEy~~~-g~lt~K  258 (361)
T KOG1187|consen  181 LGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGD-TSVSTTVMGTFGYLAPEYAST-GKLTEK  258 (361)
T ss_pred             HHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCccc-cceeeecCCCCccCChhhhcc-CCcCcc
Confidence            46899999999965   9999999999999999999999999995443211 111222 78999999999865 467899


Q ss_pred             cceeeeehhhhhhhhcCCCCCCCc---hHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhh-hhcC--CCcH
Q 012191           78 VDLWSVGCVFAELLIGKPILQGRT---EVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLR-ETFK--DLPT  151 (468)
Q Consensus        78 sDIWSLG~ILyeLltG~~pf~g~~---~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~--~~s~  151 (468)
                      +||||||++|+||++|+.+.....   ...........+...        ++  .....+.      +. ..+.  ..-.
T Consensus       259 sDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~--------~~--~eiiD~~------l~~~~~~~~~~~~  322 (361)
T KOG1187|consen  259 SDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEG--------KL--REIVDPR------LKEGEYPDEKEVK  322 (361)
T ss_pred             cccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCc--------ch--hheeCCC------ccCCCCChHHHHH
Confidence            999999999999999998876432   111111111111110        00  0001111      10 0001  1122


Q ss_pred             HHHHHHHHhcCCCCCCCcCHHHHHh
Q 012191          152 TAVNLIETLLSVEPYKRATASAALA  176 (468)
Q Consensus       152 ~l~dLL~~mL~~DP~kRpTa~e~L~  176 (468)
                      .+..+...|++.+|.+||++.+++.
T Consensus       323 ~~~~~a~~C~~~~~~~RP~m~~Vv~  347 (361)
T KOG1187|consen  323 KLAELALRCLRPDPKERPTMSQVVK  347 (361)
T ss_pred             HHHHHHHHHcCcCCCcCcCHHHHHH
Confidence            3678899999999999999999864


No 388
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.80  E-value=3.9e-20  Score=171.89  Aligned_cols=107  Identities=31%  Similarity=0.509  Sum_probs=89.9

Q ss_pred             HHHHHHHHHHhC-CCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcC---CCCCCCCc
Q 012191            3 QLLHGLEHCHSR-GVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLG---ATDYGPSV   78 (468)
Q Consensus         3 QLL~gL~yLHs~-gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g---~~~~s~~s   78 (468)
                      .++.||.|||++ .|+|||+||+||||+.+|.+|+||||.+-.+...-  ..+-..|.-.|+|||.+..   ...|+.++
T Consensus       156 Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSi--Akt~daGCkpYmaPEri~~e~n~~gY~vks  233 (282)
T KOG0984|consen  156 SVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSI--AKTMDAGCKPYMAPERINPELNQKGYSVKS  233 (282)
T ss_pred             HHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhh--HHHHhcCCCccCChhhcCcccCcccceeeh
Confidence            478999999986 89999999999999999999999999987665431  2233567788999999853   23689999


Q ss_pred             ceeeeehhhhhhhhcCCCCC-CCchHHHHHHHHH
Q 012191           79 DLWSVGCVFAELLIGKPILQ-GRTEVEQLHKIFK  111 (468)
Q Consensus        79 DIWSLG~ILyeLltG~~pf~-g~~~~e~l~~i~~  111 (468)
                      ||||||+.+.||.+++.||. ..++.+++.++.+
T Consensus       234 DvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVe  267 (282)
T KOG0984|consen  234 DVWSLGITMIEMAILRFPYESWGTPFQQLKQVVE  267 (282)
T ss_pred             hhhhhhhhhhhhhhccccccccCCHHHHHHHHhc
Confidence            99999999999999999995 4678888888865


No 389
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.80  E-value=3.6e-20  Score=196.90  Aligned_cols=96  Identities=34%  Similarity=0.547  Sum_probs=84.7

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEEC--CCC--cEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCC
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVN--NEG--VLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPS   77 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld--~~g--~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~   77 (468)
                      ..|..||.|||++||+||||||.||++-  .+|  ..||+|||.|+....+  ..+++.+||..|.+||++.....|+..
T Consensus       127 ~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~--s~~~S~vGT~~YLhPel~E~q~~y~~t  204 (732)
T KOG4250|consen  127 SDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDN--SLFTSLVGTEEYLHPELYERQKKYTAT  204 (732)
T ss_pred             HHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCC--CeeeeecCchhhcChHHHhhccCcCce
Confidence            4678899999999999999999999973  334  4799999999988765  478899999999999999855689999


Q ss_pred             cceeeeehhhhhhhhcCCCCCC
Q 012191           78 VDLWSVGCVFAELLIGKPILQG   99 (468)
Q Consensus        78 sDIWSLG~ILyeLltG~~pf~g   99 (468)
                      +|.|||||++|++.||..||-.
T Consensus       205 VDLWS~GvtlY~caTG~lPF~p  226 (732)
T KOG4250|consen  205 VDLWSFGVTLYECATGELPFIP  226 (732)
T ss_pred             eehhhhhhHHHHHhccCCCCCc
Confidence            9999999999999999999943


No 390
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.79  E-value=1.3e-19  Score=189.92  Aligned_cols=146  Identities=26%  Similarity=0.360  Sum_probs=117.8

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      .|.+.||+|||+++++||||-..|+|++.++.+||+|||++......... .........|+|||.+... .|+.++|||
T Consensus       269 ~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~-~~~~klPirWLAPEtl~~~-~~s~kTDV~  346 (474)
T KOG0194|consen  269 YDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMK-KFLKKLPIRWLAPETLNTG-IFSFKTDVW  346 (474)
T ss_pred             HHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCcceeec-cccccCcceecChhhhccC-ccccccchh
Confidence            57899999999999999999999999999999999999998654311111 1112346789999999764 799999999


Q ss_pred             eeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           82 SVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        82 SLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      ||||++||+++ |..||.+....+...+|.......+.                           ....+..+..++.+|
T Consensus       347 sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~---------------------------~~~~p~~~~~~~~~c  399 (474)
T KOG0194|consen  347 SFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPI---------------------------PSKTPKELAKVMKQC  399 (474)
T ss_pred             heeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCC---------------------------CCCCHHHHHHHHHHh
Confidence            99999999998 88999999999888888442211110                           024678899999999


Q ss_pred             cCCCCCCCcCHHHHHh
Q 012191          161 LSVEPYKRATASAALA  176 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~  176 (468)
                      +..||++|||+.++.+
T Consensus       400 ~~~~p~~R~tm~~i~~  415 (474)
T KOG0194|consen  400 WKKDPEDRPTMSTIKK  415 (474)
T ss_pred             ccCChhhccCHHHHHH
Confidence            9999999999999875


No 391
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.79  E-value=1.1e-19  Score=194.25  Aligned_cols=148  Identities=21%  Similarity=0.349  Sum_probs=128.9

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCcccccc--CCcccChhhhcCCCCCCCCc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVV--TLWYRPPELLLGATDYGPSV   78 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~g--t~~Y~APE~l~g~~~~s~~s   78 (468)
                      ++-|+.|+.||-++|+|||||-..|||++.+-.+|++|||+++.+..+.....+..-|  ...|.|||.+.- ..++.++
T Consensus       737 LrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~-RKFTsAS  815 (996)
T KOG0196|consen  737 LRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAY-RKFTSAS  815 (996)
T ss_pred             HHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhh-cccCchh
Confidence            3568899999999999999999999999999999999999999886655333444333  578999999865 5789999


Q ss_pred             ceeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHH
Q 012191           79 DLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLI  157 (468)
Q Consensus        79 DIWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL  157 (468)
                      ||||+|+++||.++ |..||...++.+.+..|.+....|+.                            .++|..+..|+
T Consensus       816 DVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpP----------------------------mDCP~aL~qLM  867 (996)
T KOG0196|consen  816 DVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPP----------------------------MDCPAALYQLM  867 (996)
T ss_pred             hccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCC----------------------------CCCcHHHHHHH
Confidence            99999999999876 99999999999999999887776653                            36899999999


Q ss_pred             HHhcCCCCCCCcCHHHHHhc
Q 012191          158 ETLLSVEPYKRATASAALAS  177 (468)
Q Consensus       158 ~~mL~~DP~kRpTa~e~L~H  177 (468)
                      ..||+.|-..||+..+++.+
T Consensus       868 ldCWqkdR~~RP~F~qiV~~  887 (996)
T KOG0196|consen  868 LDCWQKDRNRRPKFAQIVST  887 (996)
T ss_pred             HHHHHHHhhcCCCHHHHHHH
Confidence            99999999999999999864


No 392
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.78  E-value=5.9e-20  Score=192.15  Aligned_cols=145  Identities=23%  Similarity=0.331  Sum_probs=118.1

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      +||+.||.|||+..+|||||-..|||+.....|||+|||+++.+...............-|||||.+.- ..++.++|||
T Consensus       498 ~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINf-RrFTtASDVW  576 (974)
T KOG4257|consen  498 YQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINF-RRFTTASDVW  576 (974)
T ss_pred             HHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccchhhccccccceeecCccccch-hcccchhhHH
Confidence            699999999999999999999999999999999999999999887654333333333667999998854 5689999999


Q ss_pred             eeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           82 SVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        82 SLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      .|||.+||++. |..||.|-.+.+.+-.|.+.-..                            .+.+.+|+.+..|+.+|
T Consensus       577 MFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRl----------------------------P~P~nCPp~LYslmskc  628 (974)
T KOG4257|consen  577 MFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERL----------------------------PCPPNCPPALYSLMSKC  628 (974)
T ss_pred             HHHHHHHHHHHhcCCccccccccceEEEecCCCCC----------------------------CCCCCCChHHHHHHHHH
Confidence            99999999986 99999987766655444322111                            12257899999999999


Q ss_pred             cCCCCCCCcCHHHHH
Q 012191          161 LSVEPYKRATASAAL  175 (468)
Q Consensus       161 L~~DP~kRpTa~e~L  175 (468)
                      |.+||.+||+..++.
T Consensus       629 WayeP~kRPrftei~  643 (974)
T KOG4257|consen  629 WAYEPSKRPRFTEIK  643 (974)
T ss_pred             hccCcccCCcHHHHH
Confidence            999999999987764


No 393
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.77  E-value=1e-18  Score=191.60  Aligned_cols=146  Identities=25%  Similarity=0.358  Sum_probs=113.9

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccc--cCCcccChhhhcCCCCCCCCcc
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRV--VTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~--gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +||+.|++||++..+|||||-..|||+..+..+||+|||+++..............  ....|||||.+.. ..|+.++|
T Consensus       425 ~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~-~~ft~kSD  503 (609)
T KOG0200|consen  425 YQIANGMEYLASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFD-RVFTSKSD  503 (609)
T ss_pred             HHHHHHHHHHhhCCccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhcc-Ccccccch
Confidence            69999999999999999999999999999999999999999855443222222222  2345999999987 67999999


Q ss_pred             eeeeehhhhhhhh-cCCCCCCCc-hHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHH
Q 012191           80 LWSVGCVFAELLI-GKPILQGRT-EVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLI  157 (468)
Q Consensus        80 IWSLG~ILyeLlt-G~~pf~g~~-~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL  157 (468)
                      |||+|++|||+++ |..||.+-. ..+.+..+.... ..                           +....++.++.+++
T Consensus       504 VWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~-r~---------------------------~~P~~c~~eiY~iM  555 (609)
T KOG0200|consen  504 VWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGN-RM---------------------------EQPEHCSDEIYDLM  555 (609)
T ss_pred             hhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCC-CC---------------------------CCCCCCCHHHHHHH
Confidence            9999999999998 889998854 333333332211 10                           11134688999999


Q ss_pred             HHhcCCCCCCCcCHHHHHh
Q 012191          158 ETLLSVEPYKRATASAALA  176 (468)
Q Consensus       158 ~~mL~~DP~kRpTa~e~L~  176 (468)
                      ..||+.+|.+||+..++.+
T Consensus       556 ~~CW~~~p~~RP~F~~~~~  574 (609)
T KOG0200|consen  556 KSCWNADPEDRPTFSECVE  574 (609)
T ss_pred             HHHhCCCcccCCCHHHHHH
Confidence            9999999999999999874


No 394
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.77  E-value=6.9e-19  Score=186.19  Aligned_cols=151  Identities=21%  Similarity=0.295  Sum_probs=123.8

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCC-c-cccccCCcccChhhhcCCCCCCCCcc
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQP-L-TSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~-~-~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      .||+.|+.||.++++|||||-..|||+-....|||||||+.+.+..+.... + ........|+|||.|.. ..++.++|
T Consensus       219 ~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh-~kFShaSD  297 (1039)
T KOG0199|consen  219 MQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRH-RKFSHASD  297 (1039)
T ss_pred             HHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhcc-ccccccch
Confidence            699999999999999999999999999999999999999998776543221 1 12234567999999975 56999999


Q ss_pred             eeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           80 LWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        80 IWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      +|++||+||||++ |..||.|.....++++|-+.-.                            -..-+.+++++.+++.
T Consensus       298 vWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~er----------------------------LpRPk~csedIY~imk  349 (1039)
T KOG0199|consen  298 VWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGER----------------------------LPRPKYCSEDIYQIMK  349 (1039)
T ss_pred             hhhhhhhHHhhhccCCCCCCCCCHHHHHHhcccccc----------------------------CCCCCCChHHHHHHHH
Confidence            9999999999998 7899999999988888742111                            1112468999999999


Q ss_pred             HhcCCCCCCCcCHHHHHhccccc
Q 012191          159 TLLSVEPYKRATASAALASEYFS  181 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~Hp~F~  181 (468)
                      .||..+|.+|||+..|.+.-+..
T Consensus       350 ~cWah~paDRptFsair~~~~l~  372 (1039)
T KOG0199|consen  350 NCWAHNPADRPTFSAIREDLVLA  372 (1039)
T ss_pred             HhccCCccccccHHHHHHhHHHH
Confidence            99999999999999887554443


No 395
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.75  E-value=6.6e-19  Score=193.85  Aligned_cols=157  Identities=31%  Similarity=0.460  Sum_probs=130.5

Q ss_pred             HHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCC-------------C-CCccccccCCcccChhhh
Q 012191            3 QLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH-------------R-QPLTSRVVTLWYRPPELL   68 (468)
Q Consensus         3 QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~-------------~-~~~~~~~gt~~Y~APE~l   68 (468)
                      +++.+++|||+.||+|||+||+|+||..-|.+|+.|||+.+..-...             . -.....+||+.|+|||++
T Consensus       151 dmvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVi  230 (1205)
T KOG0606|consen  151 DMVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVI  230 (1205)
T ss_pred             hhhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhh
Confidence            45789999999999999999999999999999999999975321100             0 011245889999999999


Q ss_pred             cCCCCCCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCC
Q 012191           69 LGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKD  148 (468)
Q Consensus        69 ~g~~~~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  148 (468)
                      .. ..|+..+|+|++|+|+|+++.|..||.|++..+.+...+......++..                          ..
T Consensus       231 lr-qgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~d--------------------------ea  283 (1205)
T KOG0606|consen  231 LR-QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEED--------------------------EA  283 (1205)
T ss_pred             hh-hccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccC--------------------------cC
Confidence            86 5699999999999999999999999999999999888876555544432                          35


Q ss_pred             CcHHHHHHHHHhcCCCCCCCc---CHHHHHhcccccCCCCC
Q 012191          149 LPTTAVNLIETLLSVEPYKRA---TASAALASEYFSTKPYA  186 (468)
Q Consensus       149 ~s~~l~dLL~~mL~~DP~kRp---Ta~e~L~Hp~F~~~p~~  186 (468)
                      +++++++||..+|..+|..|.   .+-++-+|+||+...|.
T Consensus       284 ~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~  324 (1205)
T KOG0606|consen  284 LPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDWK  324 (1205)
T ss_pred             CCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecccc
Confidence            789999999999999999995   57788899999987775


No 396
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.75  E-value=1.6e-18  Score=166.76  Aligned_cols=141  Identities=30%  Similarity=0.434  Sum_probs=103.0

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECC--CCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcC----CCCCC
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNN--EGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLG----ATDYG   75 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~--~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g----~~~~s   75 (468)
                      .||++||.|||+.++||||||.+||||-.  ...|||||||+....+..    ....--+..|.+||++..    .-...
T Consensus       128 ~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~t----V~~~~~~~~y~~pe~~~~~~ne~~~~~  203 (378)
T KOG1345|consen  128 AQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTT----VKYLEYVNNYHAPELCDTVVNEKLVVN  203 (378)
T ss_pred             HHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCce----ehhhhhhcccCCcHHHhhccccceEec
Confidence            69999999999999999999999999833  347999999998654421    122233667999998743    22356


Q ss_pred             CCcceeeeehhhhhhhhcCCCCCCCchHHH-HHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHH
Q 012191           76 PSVDLWSVGCVFAELLIGKPILQGRTEVEQ-LHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAV  154 (468)
Q Consensus        76 ~~sDIWSLG~ILyeLltG~~pf~g~~~~e~-l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~  154 (468)
                      +.+|||.||+|+|.+|+|.+||+.....+. +....+         |...+             ...+...|..+++.+.
T Consensus       204 ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~---------w~~rk-------------~~~~P~~F~~fs~~a~  261 (378)
T KOG1345|consen  204 PSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQ---------WLKRK-------------NPALPKKFNPFSEKAL  261 (378)
T ss_pred             ccccchheeeeeeeeecCCCcchhhhccCchHHHHHH---------Hhccc-------------CccCchhhcccCHHHH
Confidence            789999999999999999999985332211 111111         11111             1134556778999999


Q ss_pred             HHHHHhcCCCCCCC
Q 012191          155 NLIETLLSVEPYKR  168 (468)
Q Consensus       155 dLL~~mL~~DP~kR  168 (468)
                      .+.++-|..++.+|
T Consensus       262 r~Fkk~lt~~~~dr  275 (378)
T KOG1345|consen  262 RLFKKSLTPRFKDR  275 (378)
T ss_pred             HHHHHhcCCccccc
Confidence            99999999999999


No 397
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.74  E-value=3e-18  Score=179.17  Aligned_cols=146  Identities=19%  Similarity=0.304  Sum_probs=116.5

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      -||..|++||..+++|||||-..|+|+..+..|||+|||+++++...............-|.|||.|.- ..++.++|||
T Consensus       372 tQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAy-NtFSiKSDVW  450 (1157)
T KOG4278|consen  372 TQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY-NTFSIKSDVW  450 (1157)
T ss_pred             HHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccCcccccCcccccc-cccccchhhH
Confidence            489999999999999999999999999999999999999999887543222222233677999998864 4588999999


Q ss_pred             eeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           82 SVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        82 SLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      +|||+|||+.| |-.||+|.+....+..+.+.+.                            -+....+++.+.+|++.|
T Consensus       451 AFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyR----------------------------M~~PeGCPpkVYeLMraC  502 (1157)
T KOG4278|consen  451 AFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYR----------------------------MDGPEGCPPKVYELMRAC  502 (1157)
T ss_pred             HHHHHHHHHHhcCCCCCCCccHHHHHHHHhcccc----------------------------ccCCCCCCHHHHHHHHHH
Confidence            99999999987 8899999776655544432110                            011146899999999999


Q ss_pred             cCCCCCCCcCHHHHHh
Q 012191          161 LSVEPYKRATASAALA  176 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~  176 (468)
                      |+|.|.+||+..|+-+
T Consensus       503 W~WsPsDRPsFaeiHq  518 (1157)
T KOG4278|consen  503 WNWSPSDRPSFAEIHQ  518 (1157)
T ss_pred             hcCCcccCccHHHHHH
Confidence            9999999999988743


No 398
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.72  E-value=4.4e-18  Score=195.68  Aligned_cols=157  Identities=20%  Similarity=0.274  Sum_probs=104.2

Q ss_pred             CHHHHHHHHHHH---hCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCC
Q 012191            1 MNQLLHGLEHCH---SRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPS   77 (468)
Q Consensus         1 m~QLL~gL~yLH---s~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~   77 (468)
                      +.||+.||+|||   +.+|+||||||+||+++.++..++. |+.......     .....+|+.|+|||++.+ ..|+.+
T Consensus       786 ~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~-----~~~~~~t~~y~aPE~~~~-~~~~~~  858 (968)
T PLN00113        786 AIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT-----DTKCFISSAYVAPETRET-KDITEK  858 (968)
T ss_pred             HHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc-----CCCccccccccCcccccC-CCCCcc
Confidence            368999999999   6799999999999999998887775 555432221     123367899999999876 568999


Q ss_pred             cceeeeehhhhhhhhcCCCCCCCchH-HHHHHHHHHcC-CCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHH
Q 012191           78 VDLWSVGCVFAELLIGKPILQGRTEV-EQLHKIFKLCG-SPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVN  155 (468)
Q Consensus        78 sDIWSLG~ILyeLltG~~pf~g~~~~-e~l~~i~~~~g-~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~d  155 (468)
                      +|||||||++|||++|+.||...... ..+........ ......|          ..+......   ........++.+
T Consensus       859 sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~---~~~~~~~~~~~~  925 (968)
T PLN00113        859 SDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMW----------IDPSIRGDV---SVNQNEIVEVMN  925 (968)
T ss_pred             cchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhhe----------eCccccCCC---CccHHHHHHHHH
Confidence            99999999999999999998532110 01111111110 0000000          000000000   000112345789


Q ss_pred             HHHHhcCCCCCCCcCHHHHHhc
Q 012191          156 LIETLLSVEPYKRATASAALAS  177 (468)
Q Consensus       156 LL~~mL~~DP~kRpTa~e~L~H  177 (468)
                      ++.+||+.||.+|||+.++++.
T Consensus       926 l~~~Cl~~~P~~RPt~~evl~~  947 (968)
T PLN00113        926 LALHCTATDPTARPCANDVLKT  947 (968)
T ss_pred             HHHhhCcCCchhCcCHHHHHHH
Confidence            9999999999999999999865


No 399
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.72  E-value=8.9e-18  Score=154.05  Aligned_cols=117  Identities=39%  Similarity=0.657  Sum_probs=99.3

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECC-CCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNN-EGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~-~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +.|++.+|.+||+.|++|+||+|.||+++. ++.++|+|||.+........ ......+...|++||.+.....++.+.|
T Consensus        98 ~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~~D  176 (215)
T cd00180          98 LLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKTIVGTPAYMAPEVLLGKGYYSEKSD  176 (215)
T ss_pred             HHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhcccCCCCccChhHhcccCCCCchhh
Confidence            368999999999999999999999999999 89999999999876654321 1233456788999999876436788999


Q ss_pred             eeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           80 LWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        80 IWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      +|++|+++++|                                                            ..+.++|..
T Consensus       177 ~~~lg~~~~~l------------------------------------------------------------~~~~~~l~~  196 (215)
T cd00180         177 IWSLGVILYEL------------------------------------------------------------PELKDLIRK  196 (215)
T ss_pred             hHHHHHHHHHH------------------------------------------------------------HHHHHHHHH
Confidence            99999999999                                                            236789999


Q ss_pred             hcCCCCCCCcCHHHHHhcc
Q 012191          160 LLSVEPYKRATASAALASE  178 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~Hp  178 (468)
                      ||..||.+|||+.+++.++
T Consensus       197 ~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         197 MLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             HhhCCcccCcCHHHHhhCC
Confidence            9999999999999999874


No 400
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.71  E-value=1.3e-17  Score=173.91  Aligned_cols=153  Identities=18%  Similarity=0.246  Sum_probs=120.5

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCcc-ccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLT-SRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~-~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||+.|++||.+.++|||||-+.|+|++.++++||+|||+++-+..+...... ..+....|+|+|.++- ..++.++|+
T Consensus       644 tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsill-gkFttaSDv  722 (807)
T KOG1094|consen  644 TQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILL-GKFTTASDV  722 (807)
T ss_pred             HHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHh-ccccchhhh
Confidence            59999999999999999999999999999999999999999855544333333 2344788999998875 468999999


Q ss_pred             eeeehhhhhhh--hcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHH
Q 012191           81 WSVGCVFAELL--IGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIE  158 (468)
Q Consensus        81 WSLG~ILyeLl--tG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~  158 (468)
                      |+||+++||++  |...||...++.....+....+.......                     ......-++..+.+||.
T Consensus       723 WafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~---------------------~l~~P~~cp~~lyelml  781 (807)
T KOG1094|consen  723 WAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQV---------------------VLSRPPACPQGLYELML  781 (807)
T ss_pred             hhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcce---------------------eccCCCcCcHHHHHHHH
Confidence            99999999985  57899988887777666654433222111                     01112357888999999


Q ss_pred             HhcCCCCCCCcCHHHHHh
Q 012191          159 TLLSVEPYKRATASAALA  176 (468)
Q Consensus       159 ~mL~~DP~kRpTa~e~L~  176 (468)
                      .|+..|-.+|||.+++..
T Consensus       782 ~Cw~~es~~RPsFe~lh~  799 (807)
T KOG1094|consen  782 RCWRRESEQRPSFEQLHL  799 (807)
T ss_pred             HHhchhhhcCCCHHHHHH
Confidence            999999999999999854


No 401
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.71  E-value=2.3e-17  Score=165.31  Aligned_cols=146  Identities=25%  Similarity=0.347  Sum_probs=119.1

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccc-cccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTS-RVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~-~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      .||..|++|||++||||.||-..|++|++.-.+||+|=.+++..-+.....+.. ......||+||.+.. ..|+.++|+
T Consensus       403 sQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n-~~yssasDv  481 (563)
T KOG1024|consen  403 SQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQN-SHYSSASDV  481 (563)
T ss_pred             HHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhh-hhhcchhhh
Confidence            489999999999999999999999999999999999998887555443332221 223567999999976 569999999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      ||||++||||++ |+.|+-.-+..+..+.+.+....                   .+|         -++|.++..++.-
T Consensus       482 WsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyRl-------------------aQP---------~NCPDeLf~vMac  533 (563)
T KOG1024|consen  482 WSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYRL-------------------AQP---------FNCPDELFTVMAC  533 (563)
T ss_pred             HHHHHHHHHHHhcCCCCccccCHHHHHHHHhcccee-------------------cCC---------CCCcHHHHHHHHH
Confidence            999999999998 89999888888777766443211                   111         2689999999999


Q ss_pred             hcCCCCCCCcCHHHHHh
Q 012191          160 LLSVEPYKRATASAALA  176 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~  176 (468)
                      ||..+|++||+.+++..
T Consensus       534 CWallpeeRPsf~Qlv~  550 (563)
T KOG1024|consen  534 CWALLPEERPSFSQLVI  550 (563)
T ss_pred             HHhcCcccCCCHHHHHH
Confidence            99999999999999875


No 402
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.68  E-value=2.7e-17  Score=168.27  Aligned_cols=164  Identities=27%  Similarity=0.325  Sum_probs=106.9

Q ss_pred             HHHHHHHHHHh---------CCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCC-CccccccCCcccChhhhcCCC
Q 012191            3 QLLHGLEHCHS---------RGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQ-PLTSRVVTLWYRPPELLLGAT   72 (468)
Q Consensus         3 QLL~gL~yLHs---------~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l~g~~   72 (468)
                      -|++||+|||+         ..|+|||||..||||.+++++.|+|||+|..+.++... .....+||..|||||+|.|..
T Consensus       315 SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgai  394 (534)
T KOG3653|consen  315 SMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAI  394 (534)
T ss_pred             HHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhc
Confidence            57899999997         35999999999999999999999999999887765432 334579999999999998876


Q ss_pred             CCC-----CCcceeeeehhhhhhhhcCCCCC-CCchHHHHHHHHHHcCC-CCchhhhccCCCccccCCCCCCCCchhhhh
Q 012191           73 DYG-----PSVDLWSVGCVFAELLIGKPILQ-GRTEVEQLHKIFKLCGS-PPDDYWKKSKLPHATLFKPQQPYDSSLRET  145 (468)
Q Consensus        73 ~~s-----~~sDIWSLG~ILyeLltG~~pf~-g~~~~e~l~~i~~~~g~-p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  145 (468)
                      .+.     ...||||+|.|||||++.-..+. +....-++.-- ..+|. |.-+.....-     ..+...|+.   ...
T Consensus       395 nl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe-~evG~hPt~e~mq~~V-----V~kK~RP~~---p~~  465 (534)
T KOG3653|consen  395 NLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFE-AEVGNHPTLEEMQELV-----VRKKQRPKI---PDA  465 (534)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchh-HHhcCCCCHHHHHHHH-----HhhccCCCC---hhh
Confidence            655     26899999999999998654332 21111110000 01111 1111000000     000000111   111


Q ss_pred             cC--CCcHHHHHHHHHhcCCCCCCCcCHHHHH
Q 012191          146 FK--DLPTTAVNLIETLLSVEPYKRATASAAL  175 (468)
Q Consensus       146 ~~--~~s~~l~dLL~~mL~~DP~kRpTa~e~L  175 (468)
                      |.  .....+.+.|+.||..||+.|+||.=+-
T Consensus       466 W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~  497 (534)
T KOG3653|consen  466 WRKHAGMAVLCETIEECWDHDAEARLTAGCVE  497 (534)
T ss_pred             hhcCccHHHHHHHHHHHcCCchhhhhhhHHHH
Confidence            11  2345588999999999999999986543


No 403
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.67  E-value=7.6e-17  Score=170.35  Aligned_cols=156  Identities=30%  Similarity=0.420  Sum_probs=122.9

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhc--CCCCCCCCcc
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLL--GATDYGPSVD   79 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~--g~~~~s~~sD   79 (468)
                      +..++||+|||+.|-+|||||..|||+++.|.+|++|||.+-.+...- ....+.+||+.|||||+..  ....|...+|
T Consensus       119 Retl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati-~KrksfiGtpywmapEvaaverkggynqlcd  197 (829)
T KOG0576|consen  119 RETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATI-AKRKSFIGTPYWMAPEVAAVERKGGYNQLCD  197 (829)
T ss_pred             hhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhh-hhhhcccCCccccchhHHHHHhccccccccc
Confidence            456899999999999999999999999999999999999886554321 2235679999999999862  3346899999


Q ss_pred             eeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           80 LWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        80 IWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      ||++|+...||---++|....-....+..+-+....|+.-                        +.-...++.+-+|++.
T Consensus       198 iwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~l------------------------kDk~kws~~fh~fvK~  253 (829)
T KOG0576|consen  198 IWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTL------------------------KDKTKWSEFFHNFVKG  253 (829)
T ss_pred             ccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcc------------------------cCCccchHHHHHHHHH
Confidence            9999999999988888876665555555554433333210                        0112356778999999


Q ss_pred             hcCCCCCCCcCHHHHHhcccccC
Q 012191          160 LLSVEPYKRATASAALASEYFST  182 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~Hp~F~~  182 (468)
                      +|..+|.+|||++.+|.|||...
T Consensus       254 altknpKkRptaeklL~h~fvs~  276 (829)
T KOG0576|consen  254 ALTKNPKKRPTAEKLLQHPFVSQ  276 (829)
T ss_pred             HhcCCCccCCChhhheeceeecc
Confidence            99999999999999999999864


No 404
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.66  E-value=3.3e-17  Score=170.70  Aligned_cols=95  Identities=34%  Similarity=0.680  Sum_probs=87.5

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      |+|++.|+++||+.||||||||-+|+.++.+|.+||+|||.+.+...+   ++...+||..|.|||++.|..+.+...||
T Consensus       676 FkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~ksg---pfd~f~gtv~~aapevl~g~~y~gk~qdi  752 (772)
T KOG1152|consen  676 FKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSG---PFDVFVGTVDYAAPEVLGGEKYLGKPQDI  752 (772)
T ss_pred             HHHHHhccccccccCceecccccccEEEecCCeEEEeeccchhhhcCC---CcceeeeeccccchhhhCCCccCCCcchh
Confidence            589999999999999999999999999999999999999999877654   56778999999999999987777899999


Q ss_pred             eeeehhhhhhhhcCCCCC
Q 012191           81 WSVGCVFAELLIGKPILQ   98 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~   98 (468)
                      |+||++||.++....||.
T Consensus       753 walgillytivykenpyy  770 (772)
T KOG1152|consen  753 WALGILLYTIVYKENPYY  770 (772)
T ss_pred             hhhhheeeEEEeccCCCc
Confidence            999999999999888875


No 405
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.64  E-value=1e-15  Score=147.60  Aligned_cols=163  Identities=34%  Similarity=0.523  Sum_probs=122.7

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCC-cEEEEecCCccccCCCCCC-----CccccccCCcccChhhhcCC--C
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEG-VLKLADFGLANFSNTGHRQ-----PLTSRVVTLWYRPPELLLGA--T   72 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g-~vKL~DFGla~~~~~~~~~-----~~~~~~gt~~Y~APE~l~g~--~   72 (468)
                      +.|++.++.|+|..|++||||||+||+++..+ .++++|||.+.........     .....+++.+|++||.+.+.  .
T Consensus       107 ~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~  186 (384)
T COG0515         107 LAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLA  186 (384)
T ss_pred             HHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCC
Confidence            46899999999999999999999999999988 7999999998755443221     34667889999999999874  4


Q ss_pred             CCCCCcceeeeehhhhhhhhcCCCCCCCch---HHHHHHHHHHcCCC-CchhhhccCCCccccCCCCCCCCchhhhhcCC
Q 012191           73 DYGPSVDLWSVGCVFAELLIGKPILQGRTE---VEQLHKIFKLCGSP-PDDYWKKSKLPHATLFKPQQPYDSSLRETFKD  148 (468)
Q Consensus        73 ~~s~~sDIWSLG~ILyeLltG~~pf~g~~~---~e~l~~i~~~~g~p-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  148 (468)
                      .+....|+|++|++++++++|..||.....   .......+.....+ ....                 ......   ..
T Consensus       187 ~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~---~~  246 (384)
T COG0515         187 YASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASP-----------------LSPSNP---EL  246 (384)
T ss_pred             CCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccc-----------------cCcccc---ch
Confidence            678899999999999999999999887764   33333333332222 0000                 000000   22


Q ss_pred             CcHHHHHHHHHhcCCCCCCCcCHHHHHhcccccCC
Q 012191          149 LPTTAVNLIETLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       149 ~s~~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      ....+.+++..|+..+|..|.+..+...++|+...
T Consensus       247 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~  281 (384)
T COG0515         247 ISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHL  281 (384)
T ss_pred             hhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCc
Confidence            34678999999999999999999999998776654


No 406
>PF14531 Kinase-like:  Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.64  E-value=2.8e-17  Score=163.11  Aligned_cols=130  Identities=27%  Similarity=0.436  Sum_probs=89.8

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCC-------CCC
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGA-------TDY   74 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~-------~~~   74 (468)
                      .|+++.+++||..||+|+||+|+|+|++.+|.+.|+||+.....+..    ......+..|.|||+....       ..+
T Consensus       152 ~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~----~~~~~~~~~~~PPe~~~~~~~~~~~~~~~  227 (288)
T PF14531_consen  152 VQMIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTR----YRCSEFPVAFTPPELESCAGQFGQNNAPY  227 (288)
T ss_dssp             HHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEE----EEGGGS-TTTS-HHHHHHHTSCHHSEEEE
T ss_pred             HHHHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChHHHeecCce----eeccCCCcccCChhhhhhhcccCccccee
Confidence            58899999999999999999999999999999999999987655431    1213446779999987432       347


Q ss_pred             CCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHH
Q 012191           75 GPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAV  154 (468)
Q Consensus        75 s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~  154 (468)
                      +.+.|.|+||+++|.|+||..||..........             |                   .+..+ .++|+.++
T Consensus       228 t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~-------------~-------------------~f~~C-~~~Pe~v~  274 (288)
T PF14531_consen  228 TFATDAWQLGITLYSLWCGRLPFGLSSPEADPE-------------W-------------------DFSRC-RDMPEPVQ  274 (288)
T ss_dssp             -HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSG-------------G-------------------GGTTS-S---HHHH
T ss_pred             eeccCHHHHHHHHHHHHHccCCCCCCCcccccc-------------c-------------------cchhc-CCcCHHHH
Confidence            889999999999999999999997543211000             0                   11222 37899999


Q ss_pred             HHHHHhcCCCCCCC
Q 012191          155 NLIETLLSVEPYKR  168 (468)
Q Consensus       155 dLL~~mL~~DP~kR  168 (468)
                      .||..||+.||.+|
T Consensus       275 ~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  275 FLIRGLLQRNPEDR  288 (288)
T ss_dssp             HHHHHHT-SSGGGS
T ss_pred             HHHHHHccCCcccC
Confidence            99999999999987


No 407
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.63  E-value=7.7e-16  Score=165.70  Aligned_cols=146  Identities=20%  Similarity=0.249  Sum_probs=115.4

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCcc-ccccCCcccChhhhcCCCCCCCCcce
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLT-SRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~-~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +||++||.|||++++|||||-..|+|+.....+||.|||++............ .....+-|+|-|.+.. ..|+.++||
T Consensus       805 ~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~-~~~thqSDV  883 (1177)
T KOG1025|consen  805 YQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRI-RKYTHQSDV  883 (1177)
T ss_pred             HHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhc-cCCCchhhh
Confidence            69999999999999999999999999999999999999999877765433222 2233566888888865 569999999


Q ss_pred             eeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           81 WSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        81 WSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      ||+||.+|||+| |..|+.+....++-..+.+.. ..                           ...+..+-++..++.+
T Consensus       884 WsfGVtiWElmTFGa~Py~gi~~~eI~dlle~ge-RL---------------------------sqPpiCtiDVy~~mvk  935 (1177)
T KOG1025|consen  884 WSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGE-RL---------------------------SQPPICTIDVYMVMVK  935 (1177)
T ss_pred             hhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccc-cC---------------------------CCCCCccHHHHHHHHH
Confidence            999999999998 999998876655433332211 11                           0113467789999999


Q ss_pred             hcCCCCCCCcCHHHHHh
Q 012191          160 LLSVEPYKRATASAALA  176 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~  176 (468)
                      ||..|+..||++.++..
T Consensus       936 Cwmid~~~rp~fkel~~  952 (1177)
T KOG1025|consen  936 CWMIDADSRPTFKELAE  952 (1177)
T ss_pred             HhccCcccCccHHHHHH
Confidence            99999999999998865


No 408
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.63  E-value=1.4e-16  Score=168.35  Aligned_cols=143  Identities=31%  Similarity=0.469  Sum_probs=121.3

Q ss_pred             HHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcceee
Q 012191            3 QLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWS   82 (468)
Q Consensus         3 QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIWS   82 (468)
                      .++.|++++|+.||+|+|+|++||+++.+|.+++.|||+.+..-....     .+||..|||||++.+   ...++|.||
T Consensus       105 elaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~-----~cgt~eymApEI~~g---h~~a~D~ws  176 (612)
T KOG0603|consen  105 ELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI-----ACGTYEYRAPEIING---HLSAADWWS  176 (612)
T ss_pred             HHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhh-----cccchhhhhhHhhhc---cCCcccchh
Confidence            578899999999999999999999999999999999999876544322     289999999999974   568899999


Q ss_pred             eehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhcC
Q 012191           83 VGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLS  162 (468)
Q Consensus        83 LG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL~  162 (468)
                      +|+++++|++|..||.+    +....|.+..-..|                             ..++..+.+++..|+.
T Consensus       177 ~gvl~felltg~~pf~~----~~~~~Il~~~~~~p-----------------------------~~l~~~a~~~~~~l~~  223 (612)
T KOG0603|consen  177 FGVLAFELLTGTLPFGG----DTMKRILKAELEMP-----------------------------RELSAEARSLFRQLFK  223 (612)
T ss_pred             hhhhHHHHhhCCCCCch----HHHHHHhhhccCCc-----------------------------hhhhHHHHHHHHHHHh
Confidence            99999999999999988    67777766433222                             2466789999999999


Q ss_pred             CCCCCCcC-----HHHHHhcccccCCCCC
Q 012191          163 VEPYKRAT-----ASAALASEYFSTKPYA  186 (468)
Q Consensus       163 ~DP~kRpT-----a~e~L~Hp~F~~~p~~  186 (468)
                      .+|.+|.-     +.++++|+||....|-
T Consensus       224 r~p~nrLg~~~~~~~eik~h~f~~~i~~~  252 (612)
T KOG0603|consen  224 RNPENRLGAGPDGVDEIKQHEFFQSIDWN  252 (612)
T ss_pred             hCHHHHhccCcchhHHHhccchheeeeHh
Confidence            99999975     5799999999987664


No 409
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.62  E-value=4.9e-16  Score=145.87  Aligned_cols=109  Identities=39%  Similarity=0.647  Sum_probs=88.0

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.|++.+|.+||+.+++|+||+|.||+++.++.++|+|||.+...............++..|++||.+.+...++.++|+
T Consensus       104 ~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv  183 (225)
T smart00221      104 LRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDI  183 (225)
T ss_pred             HHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccceeccCCcCCHhHhcCCCCCCchhhH
Confidence            36899999999999999999999999999999999999999876654321122345677889999988444567789999


Q ss_pred             eeeehhhhhhhhcCCCCCC-CchH-HHHHHH
Q 012191           81 WSVGCVFAELLIGKPILQG-RTEV-EQLHKI  109 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g-~~~~-e~l~~i  109 (468)
                      |+|||++++|++|+.||.+ .... .....+
T Consensus       184 ~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~  214 (225)
T smart00221      184 WSLGVILYELLWGPEPFSGEGEFTSLLSDVW  214 (225)
T ss_pred             HHHHHHHHHHHHCCCCccccchhHHHHHHHH
Confidence            9999999999999999977 4444 444444


No 410
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.62  E-value=3.6e-16  Score=172.70  Aligned_cols=149  Identities=31%  Similarity=0.427  Sum_probs=103.8

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccc--cCCCCCCCcccc----ccCCcccChhhhcCCC--
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANF--SNTGHRQPLTSR----VVTLWYRPPELLLGAT--   72 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~--~~~~~~~~~~~~----~gt~~Y~APE~l~g~~--   72 (468)
                      +.|||.||.-||..||+|||||.+||||+.-+-+.|+||..-+.  +.......++.+    ..-.+|+|||.+....  
T Consensus       126 aFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~  205 (1431)
T KOG1240|consen  126 AFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGK  205 (1431)
T ss_pred             HHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccc
Confidence            47999999999999999999999999999999999999976432  111111112211    2246799999986422  


Q ss_pred             --------CCCCCcceeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhh
Q 012191           73 --------DYGPSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLR  143 (468)
Q Consensus        73 --------~~s~~sDIWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~  143 (468)
                              ..+++.||||+||+++||++ |+|||.-    .++-...... ...                     ...+-
T Consensus       206 ~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L----SQL~aYr~~~-~~~---------------------~e~~L  259 (1431)
T KOG1240|consen  206 TSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL----SQLLAYRSGN-ADD---------------------PEQLL  259 (1431)
T ss_pred             cccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH----HHHHhHhccC-ccC---------------------HHHHH
Confidence                    14678999999999999988 7999951    2222211100 000                     00111


Q ss_pred             hhcCCCcHHHHHHHHHhcCCCCCCCcCHHHHHhc
Q 012191          144 ETFKDLPTTAVNLIETLLSVEPYKRATASAALAS  177 (468)
Q Consensus       144 ~~~~~~s~~l~dLL~~mL~~DP~kRpTa~e~L~H  177 (468)
                      +...  +..+++||..|++.||++|.+|++.|+-
T Consensus       260 e~Ie--d~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  260 EKIE--DVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             HhCc--CccHHHHHHHHHccCchhccCHHHHHHh
Confidence            1111  3468999999999999999999999976


No 411
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.59  E-value=2.5e-16  Score=163.64  Aligned_cols=145  Identities=31%  Similarity=0.553  Sum_probs=107.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCC-----CCCccccccCCcccChhhhcCCCCCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH-----RQPLTSRVVTLWYRPPELLLGATDYG   75 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~-----~~~~~~~~gt~~Y~APE~l~g~~~~s   75 (468)
                      +.|+..|++|   +|.+|+|+||.||++..+..+||.|||+........     ....+..+||.||++||.+.+ ..|+
T Consensus       365 ~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g-~~y~  440 (516)
T KOG1033|consen  365 FKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRG-QQYS  440 (516)
T ss_pred             HHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhh-hhhh
Confidence            3688889999   999999999999999999999999999987665443     234567799999999999987 5799


Q ss_pred             CCcceeeeehhhhhhhh-cCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHH
Q 012191           76 PSVDLWSVGCVFAELLI-GKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAV  154 (468)
Q Consensus        76 ~~sDIWSLG~ILyeLlt-G~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~  154 (468)
                      .++|||+||+||+||+. -...|.   ....+..+.  -|..|+.+|                         .++ +.-.
T Consensus       441 ~kvdIyaLGlil~EL~~~f~T~~e---r~~t~~d~r--~g~ip~~~~-------------------------~d~-p~e~  489 (516)
T KOG1033|consen  441 EKVDIYALGLILAELLIQFSTQFE---RIATLTDIR--DGIIPPEFL-------------------------QDY-PEEY  489 (516)
T ss_pred             hhcchhhHHHHHHHHHHHhccHHH---HHHhhhhhh--cCCCChHHh-------------------------hcC-cHHH
Confidence            99999999999999986 221111   111111111  123332222                         122 3346


Q ss_pred             HHHHHhcCCCCCCCcCHHHHHhcccc
Q 012191          155 NLIETLLSVEPYKRATASAALASEYF  180 (468)
Q Consensus       155 dLL~~mL~~DP~kRpTa~e~L~Hp~F  180 (468)
                      .||.+||...|.+||++.+.--|+|.
T Consensus       490 ~ll~~lls~~p~~RP~~~~~~~~~~~  515 (516)
T KOG1033|consen  490 TLLQQLLSPSPEERPSAIEVALHEFL  515 (516)
T ss_pred             HHHHHhcCCCcccCchHHHHhhhhhc
Confidence            89999999999999988877777664


No 412
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.59  E-value=1.3e-15  Score=155.17  Aligned_cols=150  Identities=25%  Similarity=0.364  Sum_probs=103.3

Q ss_pred             HHHHHHHHHHHhC--------CCeeccCCCCceEECCCCcEEEEecCCccccCCCC---CCCccccccCCcccChhhhcC
Q 012191            2 NQLLHGLEHCHSR--------GVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH---RQPLTSRVVTLWYRPPELLLG   70 (468)
Q Consensus         2 ~QLL~gL~yLHs~--------gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~---~~~~~~~~gt~~Y~APE~l~g   70 (468)
                      .-++.||+|||..        .|.|||||..|||+..++.+.|+|+|+|.......   ....+..+||..|||||+|..
T Consensus       315 lS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLde  394 (513)
T KOG2052|consen  315 LSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDE  394 (513)
T ss_pred             HHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhh
Confidence            3578999999962        39999999999999999999999999997665432   124467899999999999965


Q ss_pred             CCCC-----CCCcceeeeehhhhhhhhc----------CCCCCCC----chHHHHHHHHHHcCCCCchhhhccCCCcccc
Q 012191           71 ATDY-----GPSVDLWSVGCVFAELLIG----------KPILQGR----TEVEQLHKIFKLCGSPPDDYWKKSKLPHATL  131 (468)
Q Consensus        71 ~~~~-----s~~sDIWSLG~ILyeLltG----------~~pf~g~----~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~  131 (468)
                      ....     -..+||||||.|+||+...          ++||.+-    ...+.+.+++-.-                  
T Consensus       395 tin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~------------------  456 (513)
T KOG2052|consen  395 TINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQ------------------  456 (513)
T ss_pred             hcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeec------------------
Confidence            3221     1258999999999999753          3566432    2223333322110                  


Q ss_pred             CCCCCCCCchhhhhcCCCc--HHHHHHHHHhcCCCCCCCcCHHHH
Q 012191          132 FKPQQPYDSSLRETFKDLP--TTAVNLIETLLSVEPYKRATASAA  174 (468)
Q Consensus       132 ~~~~~~~~~~l~~~~~~~s--~~l~dLL~~mL~~DP~kRpTa~e~  174 (468)
                           .+...+...|...+  ..+..||+.||..||.-|.||--+
T Consensus       457 -----~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALri  496 (513)
T KOG2052|consen  457 -----KLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRI  496 (513)
T ss_pred             -----ccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHH
Confidence                 01111122222222  346789999999999999998554


No 413
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.54  E-value=1.4e-14  Score=146.03  Aligned_cols=153  Identities=24%  Similarity=0.330  Sum_probs=106.0

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEEC--CCC--cEEEEecCCccccCCCCC-----CCccccccCCcccChhhhcCC
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVN--NEG--VLKLADFGLANFSNTGHR-----QPLTSRVVTLWYRPPELLLGA   71 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld--~~g--~vKL~DFGla~~~~~~~~-----~~~~~~~gt~~Y~APE~l~g~   71 (468)
                      +-|||+|+.|||.+||.|||||.+||||.  +++  .+.|+|||++-......-     ......-|.-..+|||+....
T Consensus       347 laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~  426 (598)
T KOG4158|consen  347 LAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAV  426 (598)
T ss_pred             HHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcC
Confidence            36999999999999999999999999983  343  488999998743322111     111234567788999998642


Q ss_pred             CCC-----CCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhc
Q 012191           72 TDY-----GPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETF  146 (468)
Q Consensus        72 ~~~-----s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~  146 (468)
                      ...     -.++|.|++|.+.||++....||.+..+.-.-..-+..                           ..+....
T Consensus       427 PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe---------------------------~qLPalp  479 (598)
T KOG4158|consen  427 PGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQE---------------------------SQLPALP  479 (598)
T ss_pred             CCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhh---------------------------hhCCCCc
Confidence            211     13789999999999999999999874432211111110                           0112222


Q ss_pred             CCCcHHHHHHHHHhcCCCCCCCcCH---HHHHhcccc
Q 012191          147 KDLPTTAVNLIETLLSVEPYKRATA---SAALASEYF  180 (468)
Q Consensus       147 ~~~s~~l~dLL~~mL~~DP~kRpTa---~e~L~Hp~F  180 (468)
                      ..+++.+++|+..+|+.||++|+++   ..+|+--.|
T Consensus       480 ~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl~LsLw  516 (598)
T KOG4158|consen  480 SRVPPVARQLVFDLLKRDPSKRVSPNIAANVLNLSLW  516 (598)
T ss_pred             ccCChHHHHHHHHHhcCCccccCCccHHHhHHHHHHh
Confidence            4678899999999999999999984   455654333


No 414
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.36  E-value=3e-12  Score=129.91  Aligned_cols=150  Identities=27%  Similarity=0.234  Sum_probs=105.6

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCC-----CcEEEEecCCccccC--CCCC----CC---ccccccCCcccChhh
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNE-----GVLKLADFGLANFSN--TGHR----QP---LTSRVVTLWYRPPEL   67 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~-----g~vKL~DFGla~~~~--~~~~----~~---~~~~~gt~~Y~APE~   67 (468)
                      .|++.+|++||+.|++||||||+|+++...     ..+.|.|||+++.+.  ....    ..   .....||..|.++.+
T Consensus       129 ~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~  208 (322)
T KOG1164|consen  129 IQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINV  208 (322)
T ss_pred             HHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHH
Confidence            589999999999999999999999999765     369999999998322  1111    11   123458999999998


Q ss_pred             hcCCCCCCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcC
Q 012191           68 LLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFK  147 (468)
Q Consensus        68 l~g~~~~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  147 (468)
                      ..+ ...+...|+||++.++.+|+.|..||.+.........+.........                        .....
T Consensus       209 H~~-~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~  263 (322)
T KOG1164|consen  209 HLG-IEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLLT------------------------DRFGD  263 (322)
T ss_pred             hCC-CccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhcc------------------------ccccC
Confidence            887 45789999999999999999999999776543333332221110000                        00112


Q ss_pred             CCcHHHHHHHHHhcCCCCCCCcCHHHHHh
Q 012191          148 DLPTTAVNLIETLLSVEPYKRATASAALA  176 (468)
Q Consensus       148 ~~s~~l~dLL~~mL~~DP~kRpTa~e~L~  176 (468)
                      ..+..+..++..+-..+...+|....+..
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~  292 (322)
T KOG1164|consen  264 LKPEEFAKILEYIDSLDYEDKPDYEKLAE  292 (322)
T ss_pred             CChHHHHHHHHHhhccCCcCCCCHHHHHH
Confidence            34566777777777778888887666544


No 415
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.35  E-value=1.4e-13  Score=150.40  Aligned_cols=158  Identities=33%  Similarity=0.517  Sum_probs=125.4

Q ss_pred             CHHHHHHHHHHH-hCCCeeccCCCCceEECCCC-cEEEEecCCccccCC--CCCCCcccccc-CCcccChhhhcCCCCCC
Q 012191            1 MNQLLHGLEHCH-SRGVLHRDIKGSNLLVNNEG-VLKLADFGLANFSNT--GHRQPLTSRVV-TLWYRPPELLLGATDYG   75 (468)
Q Consensus         1 m~QLL~gL~yLH-s~gIvHrDIKp~NILld~~g-~vKL~DFGla~~~~~--~~~~~~~~~~g-t~~Y~APE~l~g~~~~s   75 (468)
                      +.|+..+|.|+| ..++.|+||||+|.+++..+ .++++|||+|..+..  +........+| ++.|.|||.+.+.....
T Consensus       129 ~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~  208 (601)
T KOG0590|consen  129 LPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRG  208 (601)
T ss_pred             hhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcC
Confidence            468999999999 99999999999999999999 999999999987665  33344556788 99999999998866678


Q ss_pred             CCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHH
Q 012191           76 PSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVN  155 (468)
Q Consensus        76 ~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~d  155 (468)
                      ...|+||+|+++.-+++|..|+..........           ..|...+             ...-...|..++....+
T Consensus       209 ~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~-----------~~~~~~~-------------~~~~~~~~~~~~~~~~~  264 (601)
T KOG0590|consen  209 PSVDVWSLGIVLSAMLTGELPWDFPSRKDGRY-----------SSWKSNK-------------GRFTQLPWNSISDQAHD  264 (601)
T ss_pred             CCcccccccccccccccCCCCccccccccccc-----------eeecccc-------------cccccCccccCChhhhh
Confidence            89999999999999999999986433222000           0011000             00012344678889999


Q ss_pred             HHHHhcCCCCCCCcCHHHHHhcccccC
Q 012191          156 LIETLLSVEPYKRATASAALASEYFST  182 (468)
Q Consensus       156 LL~~mL~~DP~kRpTa~e~L~Hp~F~~  182 (468)
                      ++.++|..+|..|.+..++-.++|+..
T Consensus       265 ~l~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  265 LLHKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             cccccccCCchhccccccccccccccc
Confidence            999999999999999999999999988


No 416
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.24  E-value=8e-12  Score=131.88  Aligned_cols=154  Identities=27%  Similarity=0.395  Sum_probs=108.7

Q ss_pred             CHHHHHHHHHHHhCCC-eeccCCCCceEECCCCcEEEEecCCccccCCC-CCCCccccccCCcccChhhhcCCCC-----
Q 012191            1 MNQLLHGLEHCHSRGV-LHRDIKGSNLLVNNEGVLKLADFGLANFSNTG-HRQPLTSRVVTLWYRPPELLLGATD-----   73 (468)
Q Consensus         1 m~QLL~gL~yLHs~gI-vHrDIKp~NILld~~g~vKL~DFGla~~~~~~-~~~~~~~~~gt~~Y~APE~l~g~~~-----   73 (468)
                      ++.|+.||+|||.--| .|+.|+..|++++....+||.|||+....... .........-..-|.|||++.+...     
T Consensus        54 ~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~  133 (484)
T KOG1023|consen   54 IRDISKGLAYLHNSPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLES  133 (484)
T ss_pred             HHHHHHHHHHHhcCcceeeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccc
Confidence            4789999999999866 99999999999999999999999998765421 0011111223456899999976321     


Q ss_pred             -CCCCcceeeeehhhhhhhhcCCCCCCCch----HHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCC
Q 012191           74 -YGPSVDLWSVGCVFAELLIGKPILQGRTE----VEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKD  148 (468)
Q Consensus        74 -~s~~sDIWSLG~ILyeLltG~~pf~g~~~----~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  148 (468)
                       .+.+.||||+|+|++|+++...||.....    .+.+..+.+ .+..                    ++.+.+... ..
T Consensus       134 ~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~-~~~~--------------------~~rP~i~~~-~e  191 (484)
T KOG1023|consen  134 ALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKK-GGSN--------------------PFRPSIELL-NE  191 (484)
T ss_pred             cccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHh-cCCC--------------------CcCcchhhh-hh
Confidence             35679999999999999999999976332    233333322 1111                    111111111 14


Q ss_pred             CcHHHHHHHHHhcCCCCCCCcCHHHHHh
Q 012191          149 LPTTAVNLIETLLSVEPYKRATASAALA  176 (468)
Q Consensus       149 ~s~~l~dLL~~mL~~DP~kRpTa~e~L~  176 (468)
                      +++++..++..|+..+|.+||++.++-.
T Consensus       192 ~~~~l~~l~~~cw~e~P~~rPs~~~i~~  219 (484)
T KOG1023|consen  192 LPPELLLLVARCWEEIPEKRPSIEQIRS  219 (484)
T ss_pred             cchHHHHHHHHhcccChhhCccHHHHHh
Confidence            5668999999999999999999988753


No 417
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.22  E-value=6.1e-12  Score=119.76  Aligned_cols=101  Identities=20%  Similarity=0.153  Sum_probs=75.8

Q ss_pred             CHHHHHHHHHHHhCCCeeccC-CCCceEECCCCcEEEEecCCccccCCCCCC----C--------ccccccCCcccChhh
Q 012191            1 MNQLLHGLEHCHSRGVLHRDI-KGSNLLVNNEGVLKLADFGLANFSNTGHRQ----P--------LTSRVVTLWYRPPEL   67 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDI-Kp~NILld~~g~vKL~DFGla~~~~~~~~~----~--------~~~~~gt~~Y~APE~   67 (468)
                      +.|++.+|.+||.+||+|||| ||+|||++.++.++|+|||++.........    .        ......++.|+.|+.
T Consensus        97 ~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~  176 (218)
T PRK12274         97 FRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVE  176 (218)
T ss_pred             HHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHH
Confidence            368899999999999999999 799999999999999999999865543210    0        001124677888875


Q ss_pred             hcCCCCCC-CCcceeeeehhhhhhhhcCCCCCCCc
Q 012191           68 LLGATDYG-PSVDLWSVGCVFAELLIGKPILQGRT  101 (468)
Q Consensus        68 l~g~~~~s-~~sDIWSLG~ILyeLltG~~pf~g~~  101 (468)
                      -.-....+ ...+.++.|+.+|.++|+..++.+++
T Consensus       177 ~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~  211 (218)
T PRK12274        177 RRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN  211 (218)
T ss_pred             HhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence            43221223 45688899999999999998886654


No 418
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.18  E-value=2.6e-11  Score=125.02  Aligned_cols=88  Identities=20%  Similarity=0.298  Sum_probs=65.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccC-CCCceEECCCCcEEEEecCCccccCCCCC-------CCccccccCCcccChhhhcCC-
Q 012191            1 MNQLLHGLEHCHSRGVLHRDI-KGSNLLVNNEGVLKLADFGLANFSNTGHR-------QPLTSRVVTLWYRPPELLLGA-   71 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDI-Kp~NILld~~g~vKL~DFGla~~~~~~~~-------~~~~~~~gt~~Y~APE~l~g~-   71 (468)
                      +.|++.||.|||++||+|||| ||+|||++.++.++|+|||++..+.....       ...+...+++.|.+||.+... 
T Consensus       117 ~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~  196 (365)
T PRK09188        117 FRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRE  196 (365)
T ss_pred             HHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChhh
Confidence            468999999999999999999 99999999999999999999986654321       112445678889999988532 


Q ss_pred             ----CCCCCCccee-eeehhhh
Q 012191           72 ----TDYGPSVDLW-SVGCVFA   88 (468)
Q Consensus        72 ----~~~s~~sDIW-SLG~ILy   88 (468)
                          ...+...|-| .-|=+.+
T Consensus       197 ~~~~~~~~~~~dgW~~TGDlg~  218 (365)
T PRK09188        197 RKILARKSLPSRIWLATGKKVY  218 (365)
T ss_pred             hccccccccccCcEEeCCCEEE
Confidence                1223446666 4555444


No 419
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.14  E-value=6.3e-11  Score=127.27  Aligned_cols=156  Identities=25%  Similarity=0.353  Sum_probs=115.4

Q ss_pred             HHHHHHHHHHhC-CCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccc--------cccCCcccChhhhcCCCC
Q 012191            3 QLLHGLEHCHSR-GVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTS--------RVVTLWYRPPELLLGATD   73 (468)
Q Consensus         3 QLL~gL~yLHs~-gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~--------~~gt~~Y~APE~l~g~~~   73 (468)
                      ++..||.|+|.. ++||++|.|++|.++..+.+||+.|+++.....+...++..        ..-...|.|||++.+ ..
T Consensus       107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~-~~  185 (700)
T KOG2137|consen  107 NVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG-TT  185 (700)
T ss_pred             cccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc-cc
Confidence            345789999975 89999999999999999999999999886544322222211        122567999999987 56


Q ss_pred             CCCCcceeeeehhhhhhh-hcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHH
Q 012191           74 YGPSVDLWSVGCVFAELL-IGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTT  152 (468)
Q Consensus        74 ~s~~sDIWSLG~ILyeLl-tG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~  152 (468)
                      .+.++|+||+||++|.+. .|++.+.+.........-....+...                         ...-..++.+
T Consensus       186 ~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~-------------------------~~~s~~~p~e  240 (700)
T KOG2137|consen  186 NTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGA-------------------------FGYSNNLPSE  240 (700)
T ss_pred             ccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhccccccc-------------------------ccccccCcHH
Confidence            789999999999999999 67777765543332222211111110                         0001578999


Q ss_pred             HHHHHHHhcCCCCCCCcCHHHHHhcccccCCC
Q 012191          153 AVNLIETLLSVEPYKRATASAALASEYFSTKP  184 (468)
Q Consensus       153 l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~p  184 (468)
                      +++-|.++|..++..||++.+++..+||.+-.
T Consensus       241 l~~~l~k~l~~~~~~rp~~~~l~~~~ff~D~~  272 (700)
T KOG2137|consen  241 LRESLKKLLNGDSAVRPTLDLLLSIPFFSDPG  272 (700)
T ss_pred             HHHHHHHHhcCCcccCcchhhhhcccccCCch
Confidence            99999999999999999999999999998753


No 420
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.13  E-value=1.4e-10  Score=110.83  Aligned_cols=147  Identities=24%  Similarity=0.255  Sum_probs=105.1

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCC---CcEEEEecCCccccCCCCCC------CccccccCCcccChhhhcCCC
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNE---GVLKLADFGLANFSNTGHRQ------PLTSRVVTLWYRPPELLLGAT   72 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~---g~vKL~DFGla~~~~~~~~~------~~~~~~gt~~Y~APE~l~g~~   72 (468)
                      -|++.-|+|+|.+++|||||||+|+|+.-.   ..+.|+|||++..+......      .-....||..|.+--...+. 
T Consensus       118 DQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~-  196 (341)
T KOG1163|consen  118 DQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGI-  196 (341)
T ss_pred             HHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhh-
Confidence            389999999999999999999999998543   46899999999765543211      12345788899888777663 


Q ss_pred             CCCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHH
Q 012191           73 DYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTT  152 (468)
Q Consensus        73 ~~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~  152 (468)
                      .-+...|+=|+|.+|..+..|..||+|-......++..+....                     .....+..++..+|.+
T Consensus       197 eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~Ek---------------------K~s~~ie~LC~G~P~E  255 (341)
T KOG1163|consen  197 EQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEK---------------------KMSTPIEVLCKGFPAE  255 (341)
T ss_pred             hhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHh---------------------hcCCCHHHHhCCCcHH
Confidence            3567899999999999999999999987554433333222110                     0122345566788888


Q ss_pred             HHHHHHHhcCCCCCCCcC
Q 012191          153 AVNLIETLLSVEPYKRAT  170 (468)
Q Consensus       153 l~dLL~~mL~~DP~kRpT  170 (468)
                      +...|.-|=..--.+-|.
T Consensus       256 F~myl~Y~R~L~F~E~Pd  273 (341)
T KOG1163|consen  256 FAMYLNYCRGLGFEEKPD  273 (341)
T ss_pred             HHHHHHHHhhcCCCCCCc
Confidence            888888775555555554


No 421
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.10  E-value=2.6e-10  Score=113.21  Aligned_cols=107  Identities=31%  Similarity=0.420  Sum_probs=86.8

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCC-----cEEEEecCCccccCCCCCC------CccccccCCcccChhhhcC
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEG-----VLKLADFGLANFSNTGHRQ------PLTSRVVTLWYRPPELLLG   70 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g-----~vKL~DFGla~~~~~~~~~------~~~~~~gt~~Y~APE~l~g   70 (468)
                      .||+.-++|+|++.+|.|||||+|+||...+     .|.|+|||+|+.+......      ...+..||..||+--..+|
T Consensus       131 ~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlG  210 (449)
T KOG1165|consen  131 KQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLG  210 (449)
T ss_pred             HHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeecccc
Confidence            6899999999999999999999999996543     5899999999876654321      1235678999999888887


Q ss_pred             CCCCCCCcceeeeehhhhhhhhcCCCCCCC---chHHHHHHH
Q 012191           71 ATDYGPSVDLWSVGCVFAELLIGKPILQGR---TEVEQLHKI  109 (468)
Q Consensus        71 ~~~~s~~sDIWSLG~ILyeLltG~~pf~g~---~~~e~l~~i  109 (468)
                      . .-+...|+=|||-||.++|.|..||+|-   +..+-+++|
T Consensus       211 r-EQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKI  251 (449)
T KOG1165|consen  211 R-EQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKI  251 (449)
T ss_pred             c-hhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHh
Confidence            4 4678899999999999999999999874   444445554


No 422
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.06  E-value=9e-11  Score=113.52  Aligned_cols=75  Identities=16%  Similarity=0.295  Sum_probs=58.3

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCccee
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLW   81 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIW   81 (468)
                      .||+.+|..||..|++|+||||+||+++.+| ++|+|||.........              +-+.+.-...|+.++|+|
T Consensus       142 ~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~--------------a~d~~vler~y~~~~di~  206 (232)
T PRK10359        142 AKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRK--------------AKDRIDLERHYGIKNEIK  206 (232)
T ss_pred             HHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEECCCcccccchh--------------hHHHHHHHhHhccccccc
Confidence            5899999999999999999999999999988 9999999875443211              111122223577899999


Q ss_pred             eeehhhhhhh
Q 012191           82 SVGCVFAELL   91 (468)
Q Consensus        82 SLG~ILyeLl   91 (468)
                      +||+++..+.
T Consensus       207 ~lg~~~~~~~  216 (232)
T PRK10359        207 DLGYYLLIYK  216 (232)
T ss_pred             ceeEeehHHH
Confidence            9999987664


No 423
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.99  E-value=3.2e-10  Score=126.18  Aligned_cols=159  Identities=29%  Similarity=0.366  Sum_probs=123.4

Q ss_pred             HHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCC------C---------------C----C-----CC
Q 012191            3 QLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNT------G---------------H----R-----QP   52 (468)
Q Consensus         3 QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~------~---------------~----~-----~~   52 (468)
                      .+.+++++||...+.|+|++|.|+|+..++..++.||+.......      .               .    .     ..
T Consensus       912 ~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~  991 (1205)
T KOG0606|consen  912 ERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARR  991 (1205)
T ss_pred             HHHhhhhccccchhhcccccccchhhcccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhc
Confidence            467889999999999999999999999999999999984321110      0               0    0     01


Q ss_pred             ccccccCCcccChhhhcCCCCCCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccC
Q 012191           53 LTSRVVTLWYRPPELLLGATDYGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLF  132 (468)
Q Consensus        53 ~~~~~gt~~Y~APE~l~g~~~~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~  132 (468)
                      ....++|+.|.+||.+++.. -+..+|+|++|+++++.++|.+||...+....+..|....-..+               
T Consensus       992 ~~~~~~t~~~laPe~~lg~~-hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p--------------- 1055 (1205)
T KOG0606|consen  992 KHAVVGTPDYLAPEILLGRR-HGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRDIPWP--------------- 1055 (1205)
T ss_pred             cccccCCCcccCCccccccc-CCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCCCCCC---------------
Confidence            12346799999999998854 57889999999999999999999999888777766643221111               


Q ss_pred             CCCCCCCchhhhhcCCCcHHHHHHHHHhcCCCCCCCcCHH---HHHhcccccCCCCCCC
Q 012191          133 KPQQPYDSSLRETFKDLPTTAVNLIETLLSVEPYKRATAS---AALASEYFSTKPYACD  188 (468)
Q Consensus       133 ~~~~~~~~~l~~~~~~~s~~l~dLL~~mL~~DP~kRpTa~---e~L~Hp~F~~~p~~~~  188 (468)
                                 .-....+..+++++..+|..+|.+|..+.   ++-.|+||+...|...
T Consensus      1056 -----------~g~~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~~~~l 1103 (1205)
T KOG0606|consen 1056 -----------EGPEEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVDWENL 1103 (1205)
T ss_pred             -----------CCccccChhhhhhhhhhhccCchhccCcccccccccCCccCCCCcccc
Confidence                       11124678899999999999999999987   8889999998877643


No 424
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=98.82  E-value=2.5e-09  Score=120.65  Aligned_cols=92  Identities=26%  Similarity=0.349  Sum_probs=76.8

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECC-------CCcEEEEecCCccccCC-CCCCCccccccCCcccChhhhcCCCC
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNN-------EGVLKLADFGLANFSNT-GHRQPLTSRVVTLWYRPPELLLGATD   73 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~-------~g~vKL~DFGla~~~~~-~~~~~~~~~~gt~~Y~APE~l~g~~~   73 (468)
                      .|||.-|++||..+|||+||||+|+||..       ...++|+|||.+.-+.. .....+...+.|-.+-.+|...| ..
T Consensus       801 ~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~g-rp  879 (974)
T KOG1166|consen  801 CQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREG-RP  879 (974)
T ss_pred             HHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcC-CC
Confidence            58999999999999999999999999942       33599999999854332 11235566778889999998887 67


Q ss_pred             CCCCcceeeeehhhhhhhhcC
Q 012191           74 YGPSVDLWSVGCVFAELLIGK   94 (468)
Q Consensus        74 ~s~~sDIWSLG~ILyeLltG~   94 (468)
                      |+..+|.|.|+.+++.||.|+
T Consensus       880 WtYq~DyfGlAa~~h~mLFG~  900 (974)
T KOG1166|consen  880 WTYQIDYFGLAATVHVMLFGK  900 (974)
T ss_pred             CchhhhhHHHHHHHHHHHHHH
Confidence            999999999999999999996


No 425
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=98.80  E-value=3.6e-09  Score=99.55  Aligned_cols=45  Identities=20%  Similarity=0.273  Sum_probs=40.0

Q ss_pred             CHHHHHHHHHH-HhCCCeeccCCCCceEECCCCcEEEEecCCccccC
Q 012191            1 MNQLLHGLEHC-HSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSN   46 (468)
Q Consensus         1 m~QLL~gL~yL-Hs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~   46 (468)
                      +.||+.+|.+| |+.||+||||||+|||++ ++.++|+|||++....
T Consensus       123 ~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~LiDFG~a~~~~  168 (190)
T cd05147         123 YLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLYIIDVSQSVEHD  168 (190)
T ss_pred             HHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEEEEEccccccCC
Confidence            36899999999 799999999999999998 4789999999987543


No 426
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=98.78  E-value=5.3e-09  Score=98.06  Aligned_cols=44  Identities=20%  Similarity=0.322  Sum_probs=40.9

Q ss_pred             HHHHHHHHHHHh-CCCeeccCCCCceEECCCCcEEEEecCCccccC
Q 012191            2 NQLLHGLEHCHS-RGVLHRDIKGSNLLVNNEGVLKLADFGLANFSN   46 (468)
Q Consensus         2 ~QLL~gL~yLHs-~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~   46 (468)
                      .||+.+|.+||. .||+||||||+|||++ ++.++|+|||++....
T Consensus       124 ~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~~liDFG~a~~~~  168 (190)
T cd05145         124 EQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKPYIIDVSQAVELD  168 (190)
T ss_pred             HHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCEEEEEcccceecC
Confidence            689999999999 9999999999999998 7899999999987654


No 427
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=98.78  E-value=7.7e-09  Score=100.42  Aligned_cols=138  Identities=15%  Similarity=0.192  Sum_probs=99.2

Q ss_pred             HHHHHHHHHHhCC--CeeccCCCCceEECCCCcEEEE--ecCCccccCCCCCCCccccccCCcccChhhhcCCCCC--CC
Q 012191            3 QLLHGLEHCHSRG--VLHRDIKGSNLLVNNEGVLKLA--DFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDY--GP   76 (468)
Q Consensus         3 QLL~gL~yLHs~g--IvHrDIKp~NILld~~g~vKL~--DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~--s~   76 (468)
                      .|+.|++|||+..  |.---|....++||++-+.+|.  |--++-  .      .....-.+.|++||.+......  -.
T Consensus       297 diargmaflhslep~ipr~~lns~hvmidedltarismad~kfsf--q------e~gr~y~pawmspealqrkped~n~r  368 (448)
T KOG0195|consen  297 DIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSF--Q------EVGRAYSPAWMSPEALQRKPEDLNIR  368 (448)
T ss_pred             HHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeee--e------ccccccCcccCCHHHHhcCchhcchh
Confidence            6889999999974  4455688889999998766553  432221  0      1223446889999999754322  24


Q ss_pred             CcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHH
Q 012191           77 SVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNL  156 (468)
Q Consensus        77 ~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dL  156 (468)
                      ++|+|||++++|||.|...||..-...+.-.+|.- -|.-                          ....+.++..+..|
T Consensus       369 aadmwsfaillwel~trevpfadlspmecgmkial-eglr--------------------------v~ippgis~hm~kl  421 (448)
T KOG0195|consen  369 AADMWSFAILLWELNTREVPFADLSPMECGMKIAL-EGLR--------------------------VHIPPGISRHMNKL  421 (448)
T ss_pred             hhhHHHHHHHHHHhhccccccccCCchhhhhhhhh-cccc--------------------------ccCCCCccHHHHHH
Confidence            79999999999999999999988777766555421 1110                          01125688889999


Q ss_pred             HHHhcCCCCCCCcCHHHHH
Q 012191          157 IETLLSVEPYKRATASAAL  175 (468)
Q Consensus       157 L~~mL~~DP~kRpTa~e~L  175 (468)
                      +.-|++.||.+||....++
T Consensus       422 m~icmnedpgkrpkfdmiv  440 (448)
T KOG0195|consen  422 MNICMNEDPGKRPKFDMIV  440 (448)
T ss_pred             HHHHhcCCCCcCCCcceeh
Confidence            9999999999999876654


No 428
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.68  E-value=9.4e-09  Score=109.14  Aligned_cols=149  Identities=26%  Similarity=0.345  Sum_probs=111.6

Q ss_pred             HHHH----HHHHHHhCCCeeccCCCCceEECCC-CcEEEEecCCccccCCCCCCCc----cccccCCcccChhhhcCCCC
Q 012191            3 QLLH----GLEHCHSRGVLHRDIKGSNLLVNNE-GVLKLADFGLANFSNTGHRQPL----TSRVVTLWYRPPELLLGATD   73 (468)
Q Consensus         3 QLL~----gL~yLHs~gIvHrDIKp~NILld~~-g~vKL~DFGla~~~~~~~~~~~----~~~~gt~~Y~APE~l~g~~~   73 (468)
                      +.+.    ||.++|+.+++|-|+||.||++..+ ..++++|||+...+..+.....    ....+...|++||++.+  -
T Consensus       226 ~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~--l  303 (524)
T KOG0601|consen  226 DWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG--L  303 (524)
T ss_pred             hhhhcccccccccCCCcccccccchhheecccccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhcc--c
Confidence            4556    9999999999999999999999998 7899999999987766542211    12245677999999976  5


Q ss_pred             CCCCcceeeeehhhhhhhhcCCCCCCC--chHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcH
Q 012191           74 YGPSVDLWSVGCVFAELLIGKPILQGR--TEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPT  151 (468)
Q Consensus        74 ~s~~sDIWSLG~ILyeLltG~~pf~g~--~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~  151 (468)
                      ++...||+++|.++.+..++..++...  ....++..++     .+                         .+.+...+.
T Consensus       304 ~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~-----ip-------------------------~e~~~~~s~  353 (524)
T KOG0601|consen  304 ATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY-----IP-------------------------LEFCEGGSS  353 (524)
T ss_pred             cchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc-----Cc-------------------------hhhhcCcch
Confidence            789999999999999999887666433  2111111110     11                         112234555


Q ss_pred             HHHHHHHHhcCCCCCCCcCHHHHHhcccccCC
Q 012191          152 TAVNLIETLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       152 ~l~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      ++...+..|+..+|..|+++..++.+++....
T Consensus       354 ~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~  385 (524)
T KOG0601|consen  354 SLRSVTSQMLDEDPRLRLTAQILTALNVIHSK  385 (524)
T ss_pred             hhhhHHHHhcCcchhhhhHHHHHhccccccch
Confidence            66669999999999999999999999998753


No 429
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=98.61  E-value=3.4e-08  Score=96.30  Aligned_cols=43  Identities=26%  Similarity=0.499  Sum_probs=40.5

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccc
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANF   44 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~   44 (468)
                      .||+.+|.+||+.||+|+||||.|||++.++.++|+|||.+..
T Consensus       149 ~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~  191 (239)
T PRK01723        149 QAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRGEL  191 (239)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence            6899999999999999999999999999989999999998764


No 430
>smart00090 RIO RIO-like kinase.
Probab=98.52  E-value=6.7e-08  Score=94.18  Aligned_cols=45  Identities=20%  Similarity=0.398  Sum_probs=40.8

Q ss_pred             CHHHHHHHHHHHhCC-CeeccCCCCceEECCCCcEEEEecCCccccC
Q 012191            1 MNQLLHGLEHCHSRG-VLHRDIKGSNLLVNNEGVLKLADFGLANFSN   46 (468)
Q Consensus         1 m~QLL~gL~yLHs~g-IvHrDIKp~NILld~~g~vKL~DFGla~~~~   46 (468)
                      +.||+.+|.+||+.| |+|+||||+||+++ ++.++|+|||.+....
T Consensus       154 ~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~~  199 (237)
T smart00090      154 YDDILEEMRKLYKEGELVHGDLSEYNILVH-DGKVVIIDVSQSVELD  199 (237)
T ss_pred             HHHHHHHHHHHHhcCCEEeCCCChhhEEEE-CCCEEEEEChhhhccC
Confidence            368999999999999 99999999999999 7899999999886443


No 431
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=98.52  E-value=1.1e-07  Score=89.55  Aligned_cols=46  Identities=17%  Similarity=0.410  Sum_probs=42.1

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCC
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNT   47 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~   47 (468)
                      .||+.++.++|..||+|+||+|+||+++.++.++|+|||++.....
T Consensus       132 ~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~~~  177 (198)
T cd05144         132 DEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIYIIDWPQMVSTDH  177 (198)
T ss_pred             HHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEEEEECCccccCCC
Confidence            6899999999999999999999999999999999999999865443


No 432
>PRK10345 hypothetical protein; Provisional
Probab=98.44  E-value=1.5e-07  Score=90.17  Aligned_cols=42  Identities=21%  Similarity=0.225  Sum_probs=35.1

Q ss_pred             CHHHHHHH-HHHHhCCCeeccCCCCceEECC----CCcEEEEecCCc
Q 012191            1 MNQLLHGL-EHCHSRGVLHRDIKGSNLLVNN----EGVLKLADFGLA   42 (468)
Q Consensus         1 m~QLL~gL-~yLHs~gIvHrDIKp~NILld~----~g~vKL~DFGla   42 (468)
                      |+|++.++ +|||+++|+||||||+|||++.    ++.++|+||+.+
T Consensus       110 ~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~  156 (210)
T PRK10345        110 LRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE  156 (210)
T ss_pred             HHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence            36788788 9999999999999999999974    347999995443


No 433
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=98.38  E-value=2.9e-07  Score=85.18  Aligned_cols=44  Identities=25%  Similarity=0.387  Sum_probs=40.4

Q ss_pred             HHHHHHHHHHHh-CCCeeccCCCCceEECCCCcEEEEecCCccccC
Q 012191            2 NQLLHGLEHCHS-RGVLHRDIKGSNLLVNNEGVLKLADFGLANFSN   46 (468)
Q Consensus         2 ~QLL~gL~yLHs-~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~   46 (468)
                      .|++.++.+||. .||+|+||||+||+++ ++.++|+|||.+....
T Consensus       121 ~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~~liDfg~a~~~~  165 (187)
T cd05119         121 DQILELMRKLYREAGLVHGDLSEYNILVD-DGKVYIIDVPQAVEID  165 (187)
T ss_pred             HHHHHHHHHHhhccCcCcCCCChhhEEEE-CCcEEEEECccccccc
Confidence            689999999999 9999999999999999 8999999999986443


No 434
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.34  E-value=2.6e-06  Score=87.73  Aligned_cols=156  Identities=18%  Similarity=0.216  Sum_probs=101.6

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhc-C---CCCCCCC
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLL-G---ATDYGPS   77 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~-g---~~~~s~~   77 (468)
                      +.|+.+.+-||+.|.+-+|+.++|||+++++.|.|.|-..-.....  .......+|...|.+||+-. +   .-.-+..
T Consensus       124 RnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~n--g~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~  201 (637)
T COG4248         124 RNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINAN--GTLHLCPVGVSEFTPPELQTLPSFVGFERTAN  201 (637)
T ss_pred             HHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccceeeccC--CceEecccCccccCCHHHhccccccccCCCcc
Confidence            4688999999999999999999999999999999998543322221  23345668899999999764 1   1224567


Q ss_pred             cceeeeehhhhhhhhc-CCCCCCCchH----HHH-HHHHHHcCCCCchhhhccCCCccccCCCCCCCCc-hhhhhcCCCc
Q 012191           78 VDLWSVGCVFAELLIG-KPILQGRTEV----EQL-HKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDS-SLRETFKDLP  150 (468)
Q Consensus        78 sDIWSLG~ILyeLltG-~~pf~g~~~~----e~l-~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~s  150 (468)
                      .|.|.||+++++||.| +.||.|-...    .-+ ..|....            +..+  ...+..+.. ...--|.-++
T Consensus       202 hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~------------f~ya--~~~~~g~~p~P~~~P~~~Lp  267 (637)
T COG4248         202 HDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGR------------FAYA--SDQRRGLKPPPRSIPLSMLP  267 (637)
T ss_pred             ccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcce------------eeec--hhccCCCCCCCCCCChhhcC
Confidence            9999999999999987 8999773210    000 0111100            0000  001111111 1122344678


Q ss_pred             HHHHHHHHHhcCC--CCCCCcCHHH
Q 012191          151 TTAVNLIETLLSV--EPYKRATASA  173 (468)
Q Consensus       151 ~~l~dLL~~mL~~--DP~kRpTa~e  173 (468)
                      +++..|..+|+..  ++.-|||++.
T Consensus       268 p~vqAlF~qaF~~~~~~~~RP~a~a  292 (637)
T COG4248         268 PDVQALFQQAFTESGVATPRPTAKA  292 (637)
T ss_pred             HHHHHHHHHHhcccCCCCCCCCHHH
Confidence            9999999999874  3568999753


No 435
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.34  E-value=3.5e-07  Score=91.28  Aligned_cols=147  Identities=18%  Similarity=0.202  Sum_probs=94.7

Q ss_pred             HHHHHHHHHHHhCC--CeeccCCCCceEECCCCcEEEEecCCccccCCCC---CC-CccccccCCcccChhhhcCCCCCC
Q 012191            2 NQLLHGLEHCHSRG--VLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGH---RQ-PLTSRVVTLWYRPPELLLGATDYG   75 (468)
Q Consensus         2 ~QLL~gL~yLHs~g--IvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~---~~-~~~~~~gt~~Y~APE~l~g~~~~s   75 (468)
                      -||+.||.|||+..  |+|+++..+.|++..+|.+||.--.... ..+.-   .. ......+-+.|.+||.-.. ...+
T Consensus       183 tqIlsal~yLhs~~PpiihgnlTc~tifiq~ngLIkig~~ap~s-~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~-tn~~  260 (458)
T KOG1266|consen  183 TQILSALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDS-THPSVNSTREAEKSVNTSLPGFSAPESGTT-TNTT  260 (458)
T ss_pred             HHHHhhhhhhhccCCccccCCcchhheeecCCceEEecccCccc-cchhhhhhhHhhhhccccCCccccCCcCcc-cccc
Confidence            48999999999985  9999999999999999988876422211 11000   00 0011234577899986432 3456


Q ss_pred             CCcceeeeehhhhhhhhcCCCC-CCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHH
Q 012191           76 PSVDLWSVGCVFAELLIGKPIL-QGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAV  154 (468)
Q Consensus        76 ~~sDIWSLG~ILyeLltG~~pf-~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~  154 (468)
                      .++|||++|+...+|..+..-- .+....+.-..|......                                .-..--+
T Consensus       261 ~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~--------------------------------len~lqr  308 (458)
T KOG1266|consen  261 GASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIG--------------------------------LENGLQR  308 (458)
T ss_pred             cchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheee--------------------------------ccCcccc
Confidence            7899999999999997765331 111111111111111000                                0011124


Q ss_pred             HHHHHhcCCCCCCCcCHHHHHhcccccC
Q 012191          155 NLIETLLSVEPYKRATASAALASEYFST  182 (468)
Q Consensus       155 dLL~~mL~~DP~kRpTa~e~L~Hp~F~~  182 (468)
                      ++|.+||+-.|..||++.++|.||.+-.
T Consensus       309 ~~i~kcl~~eP~~rp~ar~llfHpllfe  336 (458)
T KOG1266|consen  309 GSITKCLEGEPNGRPDARLLLFHPLLFE  336 (458)
T ss_pred             CcCcccccCCCCCCcchhhhhcCceeee
Confidence            6899999999999999999999987654


No 436
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=98.33  E-value=5.4e-07  Score=84.31  Aligned_cols=43  Identities=30%  Similarity=0.607  Sum_probs=39.8

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANF   44 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~   44 (468)
                      +.||+.+|.+||+.|++|+||+|.||+++ ++.++|+|||++..
T Consensus        96 ~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~  138 (199)
T TIGR03724        96 LREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY  138 (199)
T ss_pred             HHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence            36899999999999999999999999999 78999999998864


No 437
>PRK14879 serine/threonine protein kinase; Provisional
Probab=98.27  E-value=9e-07  Score=83.49  Aligned_cols=42  Identities=36%  Similarity=0.661  Sum_probs=39.0

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccc
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANF   44 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~   44 (468)
                      .||+.+|.+||+.|++|+||+|.|||++ ++.++|+|||++..
T Consensus       102 ~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879        102 REIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             HHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            5789999999999999999999999999 78899999998764


No 438
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=98.20  E-value=9.6e-07  Score=95.96  Aligned_cols=44  Identities=32%  Similarity=0.587  Sum_probs=40.0

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCcccc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFS   45 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~   45 (468)
                      +.||+.+|.+||+.||+||||||+|||+ .++.++|+|||++...
T Consensus       434 ~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~~  477 (535)
T PRK09605        434 VRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS  477 (535)
T ss_pred             HHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence            3689999999999999999999999999 6788999999998653


No 439
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=98.15  E-value=3.1e-06  Score=91.37  Aligned_cols=89  Identities=25%  Similarity=0.402  Sum_probs=67.5

Q ss_pred             CHHHHHHHHHHH-hCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcc
Q 012191            1 MNQLLHGLEHCH-SRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         1 m~QLL~gL~yLH-s~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      |+||+.||.||| +.+++|++|..+.|+|+..|..||++|.++........ +......--.|..|+.+..   -....|
T Consensus       110 l~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~~~~---s~~s~D  185 (690)
T KOG1243|consen  110 LFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEEIDP---SEWSID  185 (690)
T ss_pred             HHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhhcCc---cccchh
Confidence            579999999998 56899999999999999999999999998754432211 1122222334777775532   124679


Q ss_pred             eeeeehhhhhhhhc
Q 012191           80 LWSVGCVFAELLIG   93 (468)
Q Consensus        80 IWSLG~ILyeLltG   93 (468)
                      .|-|||++++++.|
T Consensus       186 ~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  186 SWGLGCLIEELFNG  199 (690)
T ss_pred             hhhHHHHHHHHhCc
Confidence            99999999999999


No 440
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.14  E-value=1.6e-06  Score=92.46  Aligned_cols=144  Identities=23%  Similarity=0.260  Sum_probs=102.8

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCC-CcEEEEecCCccccCCCCCCCccccccCCcccC-hhhhcCCCCCCCCcc
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNE-GVLKLADFGLANFSNTGHRQPLTSRVVTLWYRP-PELLLGATDYGPSVD   79 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~-g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~A-PE~l~g~~~~s~~sD   79 (468)
                      .|++.++.++|+..++|+|++|+||++..+ +..++.|||+...+...    .......-++.| .|++.....+..+.|
T Consensus       373 ~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~----~~~~~~~~r~~p~~~~~~e~~~~~~~~~  448 (524)
T KOG0601|consen  373 AQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFS----SGVFHHIDRLYPIAEILLEDYPHLSKAD  448 (524)
T ss_pred             HHHHhccccccchhhhcccccccceeeccchhhhhcccccccccccee----cccccccccccccchhhccccccccccc
Confidence            589999999999999999999999999887 77899999988643221    111223444553 666666567888999


Q ss_pred             eeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHH
Q 012191           80 LWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIET  159 (468)
Q Consensus        80 IWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~  159 (468)
                      +++||.-+.+.+++.+.-...+..   ..|+.                             ......+.....+..+...
T Consensus       449 ~~sl~~~~~e~~~~~~ls~~~~~~---~~i~~-----------------------------~~~p~~~~~~~~~q~~~kv  496 (524)
T KOG0601|consen  449 IFSLGLSVDEAITGSPLSESGVQS---LTIRS-----------------------------GDTPNLPGLKLQLQVLLKV  496 (524)
T ss_pred             cccccccccccccCcccCcccccc---eeeec-----------------------------ccccCCCchHHhhhhhhhh
Confidence            999999999999987654322111   11110                             1111123344678889999


Q ss_pred             hcCCCCCCCcCHHHHHhccccc
Q 012191          160 LLSVEPYKRATASAALASEYFS  181 (468)
Q Consensus       160 mL~~DP~kRpTa~e~L~Hp~F~  181 (468)
                      |+..|+..|+.+.++..|.=|.
T Consensus       497 ~~~~~~~~~~l~~~l~~~~~~~  518 (524)
T KOG0601|consen  497 MINPDRKRRPSAVELSLHSEFY  518 (524)
T ss_pred             hcCCccccchhhhhhcccchhh
Confidence            9999999999999998886554


No 441
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves 
Probab=97.96  E-value=7e-06  Score=71.42  Aligned_cols=44  Identities=27%  Similarity=0.446  Sum_probs=39.4

Q ss_pred             HHHHHHHHHHHhC---CCeeccCCCCceEECCCCcEEEEecCCcccc
Q 012191            2 NQLLHGLEHCHSR---GVLHRDIKGSNLLVNNEGVLKLADFGLANFS   45 (468)
Q Consensus         2 ~QLL~gL~yLHs~---gIvHrDIKp~NILld~~g~vKL~DFGla~~~   45 (468)
                      .+++.+|.+||..   +++|+||+|.||+++..+.++++|||.+...
T Consensus        93 ~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~  139 (155)
T cd05120          93 EQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG  139 (155)
T ss_pred             HHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC
Confidence            5788999999985   7999999999999999899999999988643


No 442
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=97.87  E-value=1.5e-05  Score=72.18  Aligned_cols=42  Identities=29%  Similarity=0.464  Sum_probs=37.7

Q ss_pred             HHHHHHHHHHHhCCC-----eeccCCCCceEECCCCcEEEEecCCccc
Q 012191            2 NQLLHGLEHCHSRGV-----LHRDIKGSNLLVNNEGVLKLADFGLANF   44 (468)
Q Consensus         2 ~QLL~gL~yLHs~gI-----vHrDIKp~NILld~~g~vKL~DFGla~~   44 (468)
                      .+|+.+|..||..++     +|+|++|.||+++ ++.++|+||+.+..
T Consensus        90 ~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~  136 (170)
T cd05151          90 EKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM  136 (170)
T ss_pred             HHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence            578999999999985     9999999999998 67899999998753


No 443
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=97.85  E-value=1.4e-05  Score=75.66  Aligned_cols=44  Identities=18%  Similarity=0.273  Sum_probs=38.5

Q ss_pred             HHHHHHHHHH-HhCCCeeccCCCCceEECCCCcEEEEecCCccccC
Q 012191            2 NQLLHGLEHC-HSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSN   46 (468)
Q Consensus         2 ~QLL~gL~yL-Hs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~   46 (468)
                      .|++.+|..| |..||||+||++.|||+. ++.+.|+|||.+....
T Consensus       131 ~~i~~~l~~l~H~~glVHGDLs~~NIL~~-~~~v~iIDF~qav~~~  175 (197)
T cd05146         131 YQVLSMMKQLYKECNLVHADLSEYNMLWH-DGKVWFIDVSQSVEPT  175 (197)
T ss_pred             HHHHHHHHHHHHhCCeecCCCCHHHEEEE-CCcEEEEECCCceeCC
Confidence            5788999988 899999999999999996 4789999999886543


No 444
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.64  E-value=5.8e-05  Score=70.48  Aligned_cols=42  Identities=29%  Similarity=0.569  Sum_probs=35.7

Q ss_pred             HHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCcccc
Q 012191            3 QLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFS   45 (468)
Q Consensus         3 QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~   45 (468)
                      .+-.-+.-||..||+|+||.++||++...+ +.++|||++.+.
T Consensus       100 ~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s  141 (204)
T COG3642         100 EVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEFS  141 (204)
T ss_pred             HHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCccccc
Confidence            445567889999999999999999997754 999999998643


No 445
>PF06293 Kdo:  Lipopolysaccharide kinase (Kdo/WaaP) family;  InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=97.48  E-value=9.6e-05  Score=70.33  Aligned_cols=44  Identities=27%  Similarity=0.483  Sum_probs=39.4

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCC---cEEEEecCCccc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEG---VLKLADFGLANF   44 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g---~vKL~DFGla~~   44 (468)
                      +.+|...+.-||..||+|+|+++.|||++.++   .+.|+||+.+..
T Consensus       124 l~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  124 LRALARLIAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF  170 (206)
T ss_pred             HHHHHHHHHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence            36788899999999999999999999999887   799999997754


No 446
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=97.48  E-value=0.0001  Score=73.21  Aligned_cols=43  Identities=21%  Similarity=0.307  Sum_probs=38.1

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECC-------CCcEEEEecCCcc
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNN-------EGVLKLADFGLAN   43 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~-------~g~vKL~DFGla~   43 (468)
                      +++|+..+.-||..||+|+||++.|||++.       +..+.|+||+.+.
T Consensus       144 l~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~  193 (268)
T PRK15123        144 IKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ  193 (268)
T ss_pred             HHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence            357889999999999999999999999975       4679999999875


No 447
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=97.45  E-value=0.00015  Score=76.97  Aligned_cols=40  Identities=25%  Similarity=0.438  Sum_probs=36.2

Q ss_pred             HHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccC
Q 012191            7 GLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSN   46 (468)
Q Consensus         7 gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~   46 (468)
                      .+..+|..|++|+|+||.||+++.++.++|+|||++..+.
T Consensus       269 ~l~ql~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       269 FLNQVLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS  308 (437)
T ss_pred             HHHHHHhCCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence            4678999999999999999999999999999999986654


No 448
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=97.18  E-value=0.00047  Score=64.48  Aligned_cols=42  Identities=29%  Similarity=0.555  Sum_probs=36.3

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCC---cEEEEecCCcc
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEG---VLKLADFGLAN   43 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g---~vKL~DFGla~   43 (468)
                      ++|-+.|.-||..+|+|+||..+||++..++   .+.++|||++.
T Consensus       120 ~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~  164 (229)
T KOG3087|consen  120 RRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSS  164 (229)
T ss_pred             HHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchh
Confidence            5667789999999999999999999997765   35899999975


No 449
>PF01163 RIO1:  RIO1 family;  InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date.   Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=97.13  E-value=0.00049  Score=64.78  Aligned_cols=44  Identities=30%  Similarity=0.517  Sum_probs=32.8

Q ss_pred             HHHHHHHHH-HHhCCCeeccCCCCceEECCCCcEEEEecCCccccC
Q 012191            2 NQLLHGLEH-CHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSN   46 (468)
Q Consensus         2 ~QLL~gL~y-LHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~   46 (468)
                      .+++..+.. +|..||+|+||.+.|||++.+ .+.|+|||.+....
T Consensus       113 ~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf~qav~~~  157 (188)
T PF01163_consen  113 EEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDFGQAVDSS  157 (188)
T ss_dssp             HHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--GTTEEETT
T ss_pred             HHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEecCcceecC
Confidence            356664444 679999999999999999876 99999999886443


No 450
>PF06176 WaaY:  Lipopolysaccharide core biosynthesis protein (WaaY);  InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=96.73  E-value=0.0019  Score=62.27  Aligned_cols=40  Identities=23%  Similarity=0.423  Sum_probs=35.3

Q ss_pred             HHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCcc
Q 012191            3 QLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLAN   43 (468)
Q Consensus         3 QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~   43 (468)
                      .|.++|.-||+.|++|+|++|.|++++++ .++++||+...
T Consensus       143 ki~~~ikqlH~~G~~HGD~hpgNFlv~~~-~i~iID~~~k~  182 (229)
T PF06176_consen  143 KIVEAIKQLHKHGFYHGDPHPGNFLVSNN-GIRIIDTQGKR  182 (229)
T ss_pred             HHHHHHHHHHHcCCccCCCCcCcEEEECC-cEEEEECcccc
Confidence            57889999999999999999999999865 49999998654


No 451
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=96.45  E-value=0.0027  Score=69.06  Aligned_cols=38  Identities=24%  Similarity=0.422  Sum_probs=33.0

Q ss_pred             HHHhCCCeeccCCCCceEECCCC----cEEEEecCCccccCC
Q 012191           10 HCHSRGVLHRDIKGSNLLVNNEG----VLKLADFGLANFSNT   47 (468)
Q Consensus        10 yLHs~gIvHrDIKp~NILld~~g----~vKL~DFGla~~~~~   47 (468)
                      -+...|++|+|+||.||+++.++    .++++|||++.....
T Consensus       275 Qif~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        275 QVFRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             HHHhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence            35678999999999999999888    999999999876544


No 452
>PRK09902 hypothetical protein; Provisional
Probab=96.30  E-value=0.0041  Score=59.61  Aligned_cols=42  Identities=17%  Similarity=0.174  Sum_probs=37.7

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCCceEECCCCc--EEEEecCCcc
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGV--LKLADFGLAN   43 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~--vKL~DFGla~   43 (468)
                      ++|...|.-||..|+.|+|+-+.|||++.++.  ++++||.-+.
T Consensus       135 ~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r  178 (216)
T PRK09902        135 KAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSR  178 (216)
T ss_pred             HHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccc
Confidence            57888999999999999999999999987677  9999998664


No 453
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=95.62  E-value=0.012  Score=68.03  Aligned_cols=140  Identities=21%  Similarity=0.263  Sum_probs=90.3

Q ss_pred             HHHHHHHHHHHhCCCeeccCCCC---ceEECCCCcEEEE--ecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCC
Q 012191            2 NQLLHGLEHCHSRGVLHRDIKGS---NLLVNNEGVLKLA--DFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGP   76 (468)
Q Consensus         2 ~QLL~gL~yLHs~gIvHrDIKp~---NILld~~g~vKL~--DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~   76 (468)
                      .+++.||.|+|+..+.|.-|...   +-.++..+.+.+.  ||+..........  .........+.++|..... .+..
T Consensus       293 ~~~~~GL~~~h~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~--~~~~~~~~~~~~~e~~~~~-~~~~  369 (1351)
T KOG1035|consen  293 QKLLEGLAYLHSLSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEK--SFSDLLAEIRNADEDLKEN-TAKK  369 (1351)
T ss_pred             HHHhhhHHHHHHhccceeEEecccccccccCccceeecchhhhcccccCCCccc--chhhcCccccccccccccc-cchh
Confidence            47889999999996666555444   3334455666666  8887765543321  1222335557777776542 2333


Q ss_pred             --CcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCc-HHH
Q 012191           77 --SVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLP-TTA  153 (468)
Q Consensus        77 --~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s-~~l  153 (468)
                        ..|+|++|..+..+..|..+-.-.      ...                                 ...+...+ ...
T Consensus       370 ~r~~dL~~lgll~~~~~~~~~i~~~~------~~~---------------------------------~~~l~~~~~~~~  410 (1351)
T KOG1035|consen  370 SRLTDLWCLGLLLLQLSQGEDISEKS------AVP---------------------------------VSLLDVLSTSEL  410 (1351)
T ss_pred             hhhhHHHHHHHHHhhhhhcCcccccc------cch---------------------------------hhhhccccchhh
Confidence              469999999999888776442110      000                                 01111111 267


Q ss_pred             HHHHHHhcCCCCCCCcCHHHHHhcccccCC
Q 012191          154 VNLIETLLSVEPYKRATASAALASEYFSTK  183 (468)
Q Consensus       154 ~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~~  183 (468)
                      .+++.+|+.-++++|+.+.++|.|+|.+..
T Consensus       411 ~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~~  440 (1351)
T KOG1035|consen  411 LDALPKCLDEDSEERLSALELLTHPFLRFP  440 (1351)
T ss_pred             hhhhhhhcchhhhhccchhhhhhchhcccc
Confidence            889999999999999999999999998754


No 454
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=94.87  E-value=0.038  Score=54.82  Aligned_cols=42  Identities=26%  Similarity=0.472  Sum_probs=35.6

Q ss_pred             HHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccc
Q 012191            3 QLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANF   44 (468)
Q Consensus         3 QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~   44 (468)
                      .|+.-+..+-..||||+|+.+-|||++.+|.+.++||--+..
T Consensus       210 ~il~~~~~~~~~GiVHGDlSefNIlV~~dg~~~vIDwPQ~v~  251 (304)
T COG0478         210 KILEEVRKAYRRGIVHGDLSEFNILVTEDGDIVVIDWPQAVP  251 (304)
T ss_pred             HHHHHHHHHHHcCccccCCchheEEEecCCCEEEEeCccccc
Confidence            456666666689999999999999999999999999976543


No 455
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=94.52  E-value=0.088  Score=56.38  Aligned_cols=123  Identities=19%  Similarity=0.228  Sum_probs=85.8

Q ss_pred             CHHHHHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcce
Q 012191            1 MNQLLHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDL   80 (468)
Q Consensus         1 m~QLL~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDI   80 (468)
                      +.||..||.++|+.|+.-+-|.+.+||++.+..++|...|.........             .  |.+.+    -..-|.
T Consensus       399 ~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d~-------------~--~~le~----~Qq~D~  459 (655)
T KOG3741|consen  399 ISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQEDP-------------T--EPLES----QQQNDL  459 (655)
T ss_pred             HHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeecCCC-------------C--cchhH----HhhhhH
Confidence            4699999999999999999999999999998888888777655443321             0  11222    134688


Q ss_pred             eeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHh
Q 012191           81 WSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETL  160 (468)
Q Consensus        81 WSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~m  160 (468)
                      =.||.+++.|.||..--.-.+.....                                  .+......++.+++++|.-+
T Consensus       460 ~~lG~ll~aLAt~~~ns~~~d~~~~s----------------------------------~~~~I~~~yS~D~rn~v~yl  505 (655)
T KOG3741|consen  460 RDLGLLLLALATGTENSNRTDSTQSS----------------------------------HLTRITTTYSTDLRNVVEYL  505 (655)
T ss_pred             HHHHHHHHHHhhcccccccccchHHH----------------------------------HHHHhhhhhhHHHHHHHHHH
Confidence            88999999999985221111111110                                  01222346788899999999


Q ss_pred             cCCCCCCCcCHHHHHhc
Q 012191          161 LSVEPYKRATASAALAS  177 (468)
Q Consensus       161 L~~DP~kRpTa~e~L~H  177 (468)
                      ...++.+ -++.++|.+
T Consensus       506 ~s~~~~~-ksI~~llp~  521 (655)
T KOG3741|consen  506 ESLNFRE-KSIQDLLPM  521 (655)
T ss_pred             HhcCccc-ccHHHHHHH
Confidence            9999987 588888865


No 456
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=94.27  E-value=0.057  Score=59.13  Aligned_cols=150  Identities=19%  Similarity=0.172  Sum_probs=98.2

Q ss_pred             HHHHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcceeeee
Q 012191            5 LHGLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVDLWSVG   84 (468)
Q Consensus         5 L~gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sDIWSLG   84 (468)
                      +.+|+++|+.-=+|+|    ||+..+ +..+..||+....+....  ......+++.++|||+..+ ..+....|+|++|
T Consensus       346 t~~l~~l~~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~--~~~t~~~~~~~~~pev~~~-~~~~~~p~~~~~~  417 (829)
T KOG0576|consen  346 TRPLAELHSSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM--KPRTAIGTPEPLAPEVIQE-NTIDGCPDSGSLA  417 (829)
T ss_pred             cccccccccccccCcc----cccccc-cccccccccCCcccCccc--ccccCCCCCCCCCchhhcc-cccccCCCccCCC
Confidence            4578888887778888    777755 678999999876554432  2345678999999998866 3578899999999


Q ss_pred             hhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHHHHHHHHhcCCC
Q 012191           85 CVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTAVNLIETLLSVE  164 (468)
Q Consensus        85 ~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l~dLL~~mL~~D  164 (468)
                      .-..+|--|.+|-..                |+........-+....+..        ...|...  .-.++...||.-.
T Consensus       418 ~~~~~~ap~~pPr~~----------------P~~~~~~~g~~p~s~~L~~--------~~aw~~~--~~~~~~~~~~~g~  471 (829)
T KOG0576|consen  418 VSAIQMAPGLPPRSS----------------PPAVLPMIGNGPNSPMLTD--------KSAWSPV--FHRDFPAPCLNGL  471 (829)
T ss_pred             cchhhcCCCCCCCCC----------------CccccCCCCCCCCccccch--------hhhcCcc--cccCCcccccCCC
Confidence            887777777777543                1100000000000000000        0111111  0115778899999


Q ss_pred             CCCCcCHHHHHhcccccCCCCCCC
Q 012191          165 PYKRATASAALASEYFSTKPYACD  188 (468)
Q Consensus       165 P~kRpTa~e~L~Hp~F~~~p~~~~  188 (468)
                      |..+++...++.|.+|...|.-..
T Consensus       472 P~~pkv~mgacfsKvfngCpl~i~  495 (829)
T KOG0576|consen  472 PPTPKVHMGACFSKVFNGCPLRIH  495 (829)
T ss_pred             CCCCcchhhHHHHHHhccCcccce
Confidence            999999999999999998876543


No 457
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=93.81  E-value=0.046  Score=51.16  Aligned_cols=31  Identities=29%  Similarity=0.509  Sum_probs=27.0

Q ss_pred             CCCeeccCCCCceEECC--CCcEEEEecCCccc
Q 012191           14 RGVLHRDIKGSNLLVNN--EGVLKLADFGLANF   44 (468)
Q Consensus        14 ~gIvHrDIKp~NILld~--~g~vKL~DFGla~~   44 (468)
                      ..++|+|+++.|||++.  ++.+.|+||+.+..
T Consensus       174 ~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         174 PGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             cEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence            56899999999999998  56789999998753


No 458
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=93.72  E-value=0.086  Score=53.00  Aligned_cols=30  Identities=37%  Similarity=0.588  Sum_probs=27.0

Q ss_pred             CCCeeccCCCCceEECCCCcEEEEecCCcc
Q 012191           14 RGVLHRDIKGSNLLVNNEGVLKLADFGLAN   43 (468)
Q Consensus        14 ~gIvHrDIKp~NILld~~g~vKL~DFGla~   43 (468)
                      .+++|+|+++.||+++.++.+.|+||+.+.
T Consensus       187 ~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       187 RGVIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             CccCCCCCCcCcEEEECCceEEEeeccccc
Confidence            689999999999999988877899999764


No 459
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=93.25  E-value=0.12  Score=50.67  Aligned_cols=44  Identities=20%  Similarity=0.332  Sum_probs=37.1

Q ss_pred             HHHHHHHHHHHh-CCCeeccCCCCceEECCCCcEEEEecCCccccC
Q 012191            2 NQLLHGLEHCHS-RGVLHRDIKGSNLLVNNEGVLKLADFGLANFSN   46 (468)
Q Consensus         2 ~QLL~gL~yLHs-~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~   46 (468)
                      .++++.+.-|-. .|+||+||..-|||+. ++.+.|+|||-+....
T Consensus       173 ~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~  217 (268)
T COG1718         173 EDVVEYMRRLYKEAGLVHGDLSEYNILVH-DGEPYIIDVSQAVTID  217 (268)
T ss_pred             HHHHHHHHHHHHhcCcccccchhhheEEE-CCeEEEEECccccccC
Confidence            467777777766 8999999999999998 8899999999886444


No 460
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=93.12  E-value=0.033  Score=59.66  Aligned_cols=92  Identities=22%  Similarity=0.264  Sum_probs=69.6

Q ss_pred             CCCCcceeeeehhhhhhhhcCCCCCCCchHHHHHHHHHHcCCCCchhhhccCCCccccCCCCCCCCchhhhhcCCCcHHH
Q 012191           74 YGPSVDLWSVGCVFAELLIGKPILQGRTEVEQLHKIFKLCGSPPDDYWKKSKLPHATLFKPQQPYDSSLRETFKDLPTTA  153 (468)
Q Consensus        74 ~s~~sDIWSLG~ILyeLltG~~pf~g~~~~e~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~l  153 (468)
                      .++++|||++|.|+.++..|...+...+..+++..+.+..-.+.....                 -.........++...
T Consensus       108 ~~pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~-----------------~a~e~~~~~~~d~~~  170 (725)
T KOG1093|consen  108 IGPKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTDDQELLS-----------------TAMEHLIQLLADKKR  170 (725)
T ss_pred             CCcchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCchhHHH-----------------HHHHHHHHHhhhHhH
Confidence            346999999999999999999999988888888888775433221110                 000012223567778


Q ss_pred             HHHHHHhcCCCCCCCcCHHHHHhcccccC
Q 012191          154 VNLIETLLSVEPYKRATASAALASEYFST  182 (468)
Q Consensus       154 ~dLL~~mL~~DP~kRpTa~e~L~Hp~F~~  182 (468)
                      ..++.+|+...|..||...++++++-|..
T Consensus       171 ~~~~~~c~~~~~~ir~l~~~~~k~~i~~e  199 (725)
T KOG1093|consen  171 LPLLKKCLWLEPIIRPLPMELSKRCSFTE  199 (725)
T ss_pred             HHHhccCCccccccccchhHHhcCccHHH
Confidence            89999999999999999999999998875


No 461
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=92.86  E-value=0.12  Score=51.40  Aligned_cols=30  Identities=33%  Similarity=0.564  Sum_probs=26.7

Q ss_pred             CCCeeccCCCCceEECCCCcEEEEecCCcc
Q 012191           14 RGVLHRDIKGSNLLVNNEGVLKLADFGLAN   43 (468)
Q Consensus        14 ~gIvHrDIKp~NILld~~g~vKL~DFGla~   43 (468)
                      .+++|+|+.|.|||++.++.+.|+||+.+.
T Consensus       175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~  204 (296)
T cd05153         175 RGVIHADLFRDNVLFDGDELSGVIDFYFAC  204 (296)
T ss_pred             CcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence            479999999999999988778899999764


No 462
>PRK05231 homoserine kinase; Provisional
Probab=92.81  E-value=0.079  Score=53.38  Aligned_cols=30  Identities=33%  Similarity=0.550  Sum_probs=26.1

Q ss_pred             CCCeeccCCCCceEECCCCcEEEEecCCcc
Q 012191           14 RGVLHRDIKGSNLLVNNEGVLKLADFGLAN   43 (468)
Q Consensus        14 ~gIvHrDIKp~NILld~~g~vKL~DFGla~   43 (468)
                      .|+||+|+.+.|||++.+...-|+||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~  216 (319)
T PRK05231        187 RGVIHADLFRDNVLFEGDRLSGFIDFYFAC  216 (319)
T ss_pred             cccCCCCCCCCcEEEECCceEEEEeccccc
Confidence            489999999999999876666899999774


No 463
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=92.63  E-value=0.09  Score=50.67  Aligned_cols=30  Identities=30%  Similarity=0.431  Sum_probs=25.6

Q ss_pred             CCCeeccCCCCceEECCCCcEEEEecCCcc
Q 012191           14 RGVLHRDIKGSNLLVNNEGVLKLADFGLAN   43 (468)
Q Consensus        14 ~gIvHrDIKp~NILld~~g~vKL~DFGla~   43 (468)
                      .+++|+|+.+.|||++..+..-|+||+.+.
T Consensus       164 ~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~  193 (235)
T cd05155         164 PVWFHGDLAPGNLLVQDGRLSAVIDFGCLG  193 (235)
T ss_pred             ceEEeCCCCCCcEEEECCCEEEEEeCcccC
Confidence            358999999999999876666799999874


No 464
>PF01636 APH:  Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.;  InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=92.16  E-value=0.089  Score=49.32  Aligned_cols=30  Identities=30%  Similarity=0.557  Sum_probs=21.1

Q ss_pred             CCCeeccCCCCceEEC-CCCcEEEEecCCcc
Q 012191           14 RGVLHRDIKGSNLLVN-NEGVLKLADFGLAN   43 (468)
Q Consensus        14 ~gIvHrDIKp~NILld-~~g~vKL~DFGla~   43 (468)
                      ..++|+|+.|.|||++ .++.+-|+||+.+.
T Consensus       166 ~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~  196 (239)
T PF01636_consen  166 PVLIHGDLHPGNILVDPSDGRIGIIDFEDAG  196 (239)
T ss_dssp             EEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred             cEEEEeccccccceeeeccceeEEEecccce
Confidence            4699999999999999 56667899998764


No 465
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=91.95  E-value=0.18  Score=50.25  Aligned_cols=29  Identities=28%  Similarity=0.509  Sum_probs=25.4

Q ss_pred             CCCeeccCCCCceEECCCCcEEEEecCCcc
Q 012191           14 RGVLHRDIKGSNLLVNNEGVLKLADFGLAN   43 (468)
Q Consensus        14 ~gIvHrDIKp~NILld~~g~vKL~DFGla~   43 (468)
                      .+++|+|+.+.||+++. +.+.|+||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~  215 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT  215 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence            57999999999999987 678999999653


No 466
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=91.69  E-value=0.14  Score=51.08  Aligned_cols=29  Identities=34%  Similarity=0.458  Sum_probs=26.1

Q ss_pred             CCeeccCCCCceEECCC----CcEEEEecCCcc
Q 012191           15 GVLHRDIKGSNLLVNNE----GVLKLADFGLAN   43 (468)
Q Consensus        15 gIvHrDIKp~NILld~~----g~vKL~DFGla~   43 (468)
                      +++|+|+.+.|||++.+    +.+.|+||..+.
T Consensus       180 ~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~  212 (302)
T cd05156         180 VFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS  212 (302)
T ss_pred             eEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence            58999999999999875    889999999874


No 467
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=91.65  E-value=0.13  Score=49.11  Aligned_cols=30  Identities=23%  Similarity=0.412  Sum_probs=26.4

Q ss_pred             CCCeeccCCCCceEECC-CCcEEEEecCCcc
Q 012191           14 RGVLHRDIKGSNLLVNN-EGVLKLADFGLAN   43 (468)
Q Consensus        14 ~gIvHrDIKp~NILld~-~g~vKL~DFGla~   43 (468)
                      .+++|+|+.+.|||++. ++.+.|+||..|.
T Consensus       170 ~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~  200 (235)
T cd05157         170 IVFCHNDLLSGNIIYNEEKNSVKFIDYEYAG  200 (235)
T ss_pred             EEEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence            36999999999999998 5789999998774


No 468
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=90.98  E-value=0.16  Score=48.99  Aligned_cols=28  Identities=29%  Similarity=0.396  Sum_probs=25.3

Q ss_pred             CCeeccCCCCceEECCCCcEEEEecCCcc
Q 012191           15 GVLHRDIKGSNLLVNNEGVLKLADFGLAN   43 (468)
Q Consensus        15 gIvHrDIKp~NILld~~g~vKL~DFGla~   43 (468)
                      .++|+|+.|.||+++.++ +.|+||+.+.
T Consensus       154 ~~~HgD~~~~Nii~~~~~-~~iIDwe~a~  181 (226)
T TIGR02172       154 TCLHGDFQIGNLITSGKG-TYWIDLGDFG  181 (226)
T ss_pred             ceEecCCCCCcEEEcCCC-cEEEechhcC
Confidence            478999999999999888 9999999874


No 469
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=90.97  E-value=0.034  Score=66.08  Aligned_cols=91  Identities=11%  Similarity=0.013  Sum_probs=69.7

Q ss_pred             HHHHHHHHhCC-----CeeccCCCCceEECCCCcEEEEecCCccccCCCCCCCccccccCCcccChhhhcCCCCCCCCcc
Q 012191            5 LHGLEHCHSRG-----VLHRDIKGSNLLVNNEGVLKLADFGLANFSNTGHRQPLTSRVVTLWYRPPELLLGATDYGPSVD   79 (468)
Q Consensus         5 L~gL~yLHs~g-----IvHrDIKp~NILld~~g~vKL~DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l~g~~~~s~~sD   79 (468)
                      +.+..-+|...     .+|++||+-|.+|..+..++++++|+.+...+ ........++++.|+.|++... ..++.++|
T Consensus      1345 vl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp-~~sf~Gl~l~sp~~v~qli~N~-ik~t~rsd 1422 (2724)
T KOG1826|consen 1345 VLNRNVILSLTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNP-VLSFFGLELCSPIYVLQLIKNE-IKFTKRSD 1422 (2724)
T ss_pred             HhccchhhhcccCCccchhhhhhhhccceecCCcccccccccccccCc-hHhhhhhhhCCHHHHHHHHHHH-HhhhhHHH
Confidence            44555555431     68999999999999999999999999873332 2233344566888999988765 45777799


Q ss_pred             eeeeehhhhhhhhcCCCC
Q 012191           80 LWSVGCVFAELLIGKPIL   97 (468)
Q Consensus        80 IWSLG~ILyeLltG~~pf   97 (468)
                      +|..||.+|.+..|.++|
T Consensus      1423 ilr~s~~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1423 ILRRSLSLYLRSDGNAYF 1440 (2724)
T ss_pred             HHHHHHHHHHHhcccHHH
Confidence            999999999999887776


No 470
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=90.80  E-value=0.18  Score=48.67  Aligned_cols=30  Identities=23%  Similarity=0.216  Sum_probs=26.4

Q ss_pred             CCCeeccCCCCceEECCCCcEEEEecCCcc
Q 012191           14 RGVLHRDIKGSNLLVNNEGVLKLADFGLAN   43 (468)
Q Consensus        14 ~gIvHrDIKp~NILld~~g~vKL~DFGla~   43 (468)
                      ..++|+|+.|.|||+++++.+.|+||+.+.
T Consensus       163 ~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~  192 (244)
T cd05150         163 LVVTHGDACLPNIIVDPGKFSGFIDLGRLG  192 (244)
T ss_pred             eEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence            358999999999999998778899999774


No 471
>PRK10271 thiK thiamine kinase; Provisional
Probab=90.66  E-value=0.2  Score=47.20  Aligned_cols=28  Identities=36%  Similarity=0.554  Sum_probs=24.7

Q ss_pred             CeeccCCCCceEECCCCcEEEEecCCccc
Q 012191           16 VLHRDIKGSNLLVNNEGVLKLADFGLANF   44 (468)
Q Consensus        16 IvHrDIKp~NILld~~g~vKL~DFGla~~   44 (468)
                      .+|+|+.|.||++.+++ ++|+||+.+..
T Consensus        79 p~H~D~~~~N~~~~~~~-~~lIDwe~a~~  106 (188)
T PRK10271         79 PLHMDVHAGNLVHSASG-LRLIDWEYAGD  106 (188)
T ss_pred             eecCCCCCccEEEECCC-EEEEeCCcccC
Confidence            58999999999998877 88999998753


No 472
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=90.33  E-value=0.27  Score=53.42  Aligned_cols=38  Identities=29%  Similarity=0.509  Sum_probs=32.8

Q ss_pred             HHHhCCCeeccCCCCceEECCCCcEEEEecCCccccCC
Q 012191           10 HCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLANFSNT   47 (468)
Q Consensus        10 yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla~~~~~   47 (468)
                      .+=..|++|.|.+|.||+++.+|.+.+.|||+...+.+
T Consensus       280 q~~~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~  317 (517)
T COG0661         280 QLLRDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP  317 (517)
T ss_pred             HHHhcCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence            33457999999999999999999999999999866554


No 473
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=90.27  E-value=0.2  Score=48.86  Aligned_cols=29  Identities=41%  Similarity=0.594  Sum_probs=25.4

Q ss_pred             CCeeccCCCCceEECCCCcEEEEecCCccc
Q 012191           15 GVLHRDIKGSNLLVNNEGVLKLADFGLANF   44 (468)
Q Consensus        15 gIvHrDIKp~NILld~~g~vKL~DFGla~~   44 (468)
                      .++|+|+.|.||+++.++ +.|+||+.+..
T Consensus       147 ~l~H~Dl~~~Nil~~~~~-~~lIDwE~a~~  175 (256)
T TIGR02721       147 APLHMDVHAYNLVVTPQG-LKLIDWEYASD  175 (256)
T ss_pred             eeecCCCCcCcEEEeCCC-CEEEeccccCc
Confidence            589999999999999877 78999998753


No 474
>PF01633 Choline_kinase:  Choline/ethanolamine kinase;  InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome.  Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=89.59  E-value=0.24  Score=46.85  Aligned_cols=29  Identities=38%  Similarity=0.647  Sum_probs=20.8

Q ss_pred             CCeeccCCCCceEE-CCCCcEEEEecCCcc
Q 012191           15 GVLHRDIKGSNLLV-NNEGVLKLADFGLAN   43 (468)
Q Consensus        15 gIvHrDIKp~NILl-d~~g~vKL~DFGla~   43 (468)
                      .++|.||.+.|||+ +.++.++|+||..+.
T Consensus       144 v~cHnDl~~~Nil~~~~~~~~~lIDfEya~  173 (211)
T PF01633_consen  144 VFCHNDLNPGNILINNKDGEVKLIDFEYAG  173 (211)
T ss_dssp             EEE-S--SGGGEEETSSSSCEEE--GTT-E
T ss_pred             eEeeccCccccEEeccCCCeEEEecHHHHh
Confidence            58999999999999 888999999999874


No 475
>COG0510 ycfN Thiamine kinase and related kinases [Coenzyme transport and metabolism]
Probab=88.62  E-value=0.37  Score=47.97  Aligned_cols=29  Identities=34%  Similarity=0.481  Sum_probs=26.9

Q ss_pred             CCeeccCCCCceEECCCCcEEEEecCCcc
Q 012191           15 GVLHRDIKGSNLLVNNEGVLKLADFGLAN   43 (468)
Q Consensus        15 gIvHrDIKp~NILld~~g~vKL~DFGla~   43 (468)
                      -++|+|+.|+|+|+++.+.++|+||..|.
T Consensus       154 v~cH~Dl~~~N~l~t~~~~l~LIDWEyAg  182 (269)
T COG0510         154 VPCHNDLNPGNLLLTDKGGLFLIDWEYAG  182 (269)
T ss_pred             eeecCCCCccceEEcCCCcEEEEecccCC
Confidence            48999999999999999999999999874


No 476
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=87.72  E-value=0.48  Score=47.70  Aligned_cols=30  Identities=20%  Similarity=0.253  Sum_probs=27.4

Q ss_pred             CCeeccCCCCceEECCCCcEEEEecCCccc
Q 012191           15 GVLHRDIKGSNLLVNNEGVLKLADFGLANF   44 (468)
Q Consensus        15 gIvHrDIKp~NILld~~g~vKL~DFGla~~   44 (468)
                      +++|+|+.+.|||++.++.+-|+||..+..
T Consensus       197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~  226 (309)
T TIGR02904       197 VLVHGKLSLSHFLYDETRGGYFINFEKASF  226 (309)
T ss_pred             eeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence            799999999999999999999999998753


No 477
>smart00587 CHK ZnF_C4 abd HLH domain containing kinases domain. subfamily of choline kinases
Probab=87.45  E-value=0.48  Score=44.54  Aligned_cols=30  Identities=23%  Similarity=0.408  Sum_probs=25.2

Q ss_pred             CCCeeccCCCCceEECCCC-----cEEEEecCCcc
Q 012191           14 RGVLHRDIKGSNLLVNNEG-----VLKLADFGLAN   43 (468)
Q Consensus        14 ~gIvHrDIKp~NILld~~g-----~vKL~DFGla~   43 (468)
                      ..++|||+.+.||++..++     .+.|+||..+.
T Consensus       120 ~vl~HgD~~~~N~~~~~~~~~~~~~~~liDfq~~~  154 (196)
T smart00587      120 NVLNHGDLWANNIMFKYDDEGKPEDVALIDFQLSH  154 (196)
T ss_pred             eEEeeCCCCccceeeccCCCCCccceEEEecccCC
Confidence            4689999999999997543     58999999874


No 478
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported 
Probab=86.91  E-value=0.41  Score=47.67  Aligned_cols=30  Identities=20%  Similarity=0.402  Sum_probs=25.3

Q ss_pred             CCeeccCCCCceEECCCCc-EEEEecCCccc
Q 012191           15 GVLHRDIKGSNLLVNNEGV-LKLADFGLANF   44 (468)
Q Consensus        15 gIvHrDIKp~NILld~~g~-vKL~DFGla~~   44 (468)
                      .++|+|+++.|||++.++. .-|+||+.+..
T Consensus       186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i  216 (276)
T cd05152         186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKV  216 (276)
T ss_pred             eeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence            4899999999999987555 56999998754


No 479
>PLN02236 choline kinase
Probab=86.45  E-value=0.43  Score=49.09  Aligned_cols=29  Identities=21%  Similarity=0.560  Sum_probs=25.7

Q ss_pred             CCeeccCCCCceEECC-CCcEEEEecCCcc
Q 012191           15 GVLHRDIKGSNLLVNN-EGVLKLADFGLAN   43 (468)
Q Consensus        15 gIvHrDIKp~NILld~-~g~vKL~DFGla~   43 (468)
                      .++|+|+++.|||+++ ++.+.|+||..+.
T Consensus       201 ~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~  230 (344)
T PLN02236        201 GFCHNDLQYGNIMIDEETRAITIIDYEYAS  230 (344)
T ss_pred             eEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence            5899999999999976 4689999999875


No 480
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=86.01  E-value=0.59  Score=47.99  Aligned_cols=28  Identities=25%  Similarity=0.469  Sum_probs=25.1

Q ss_pred             CeeccCCCCceEECCCCc-EEEEecCCcc
Q 012191           16 VLHRDIKGSNLLVNNEGV-LKLADFGLAN   43 (468)
Q Consensus        16 IvHrDIKp~NILld~~g~-vKL~DFGla~   43 (468)
                      +||+|+.|.|||++.+.. +-++||+.+.
T Consensus       199 iIH~D~~~~NVl~d~~~~~~g~iDFdDa~  227 (331)
T COG2334         199 IIHGDLHPDNVLFDDDTDVSGFIDFDDAG  227 (331)
T ss_pred             eeecCCCccceeEcCCCCeeeEEEccccc
Confidence            999999999999998874 8899999763


No 481
>PF07387 Seadorna_VP7:  Seadornavirus VP7;  InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=85.69  E-value=0.69  Score=45.03  Aligned_cols=37  Identities=32%  Similarity=0.425  Sum_probs=31.8

Q ss_pred             HHHHHHHHh--CCCeeccCCCCceEECCCCcEEEEecCC
Q 012191            5 LHGLEHCHS--RGVLHRDIKGSNLLVNNEGVLKLADFGL   41 (468)
Q Consensus         5 L~gL~yLHs--~gIvHrDIKp~NILld~~g~vKL~DFGl   41 (468)
                      +.+|.-.|+  .+.+|+|..|+||+-|..|.+||.|-+.
T Consensus       151 i~~L~~fH~~~~~~lHGD~np~NiM~D~~G~lKlVDP~~  189 (308)
T PF07387_consen  151 IKDLMDFHSENQHCLHGDCNPDNIMCDKFGYLKLVDPVC  189 (308)
T ss_pred             HHHHHHhhccCCCeecCCCChhheeecCCCCEEecChhh
Confidence            456777884  4799999999999999999999999664


No 482
>PF12260 PIP49_C:  Protein-kinase domain of FAM69;  InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=85.22  E-value=1  Score=42.37  Aligned_cols=44  Identities=32%  Similarity=0.271  Sum_probs=37.4

Q ss_pred             HHHHHHHHHHHh---CCCeeccCCCCceEECCCCcEEEEecCCcccc
Q 012191            2 NQLLHGLEHCHS---RGVLHRDIKGSNLLVNNEGVLKLADFGLANFS   45 (468)
Q Consensus         2 ~QLL~gL~yLHs---~gIvHrDIKp~NILld~~g~vKL~DFGla~~~   45 (468)
                      .||+..+++|+.   ..+.-.|++++|+-++.++.+|++|...+...
T Consensus        66 ~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~  112 (188)
T PF12260_consen   66 LQLLELLEELDHGPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE  112 (188)
T ss_pred             HHHHHHHHHHhcCCCCcEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence            478888888887   45888999999999999999999999876433


No 483
>PRK06148 hypothetical protein; Provisional
Probab=83.25  E-value=0.91  Score=53.47  Aligned_cols=30  Identities=37%  Similarity=0.568  Sum_probs=25.7

Q ss_pred             CCCeeccCCCCceEECCCC--cEE-EEecCCcc
Q 012191           14 RGVLHRDIKGSNLLVNNEG--VLK-LADFGLAN   43 (468)
Q Consensus        14 ~gIvHrDIKp~NILld~~g--~vK-L~DFGla~   43 (468)
                      .++||+|+.+.|||++.++  .+. |+|||.+.
T Consensus       203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~  235 (1013)
T PRK06148        203 AQVIHNDANDYNILVDADDGERISGLIDFGDAV  235 (1013)
T ss_pred             cceECCCCCcccEEEcCCCCcceEEEEECcccc
Confidence            4799999999999999875  555 99999875


No 484
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=82.83  E-value=0.95  Score=46.23  Aligned_cols=32  Identities=22%  Similarity=0.412  Sum_probs=28.5

Q ss_pred             CCeeccCCCCceEECCCCcEEEEecCCccccC
Q 012191           15 GVLHRDIKGSNLLVNNEGVLKLADFGLANFSN   46 (468)
Q Consensus        15 gIvHrDIKp~NILld~~g~vKL~DFGla~~~~   46 (468)
                      .++|+|+++.||+|+..+.+=|+||+++..-.
T Consensus       199 ~lvHGD~~~gNlii~~~~~~gVlDwe~~~lGD  230 (321)
T COG3173         199 VLVHGDYRPGNLIIDPGRPTGVLDWELATLGD  230 (321)
T ss_pred             eeeeCCcccCCEEEeCCCeeEEEeccccccCC
Confidence            48999999999999999889999999986544


No 485
>PRK11768 serine/threonine protein kinase; Provisional
Probab=81.58  E-value=0.92  Score=46.22  Aligned_cols=28  Identities=25%  Similarity=0.204  Sum_probs=23.5

Q ss_pred             CCCeeccCCCCceEECCCCcEEEEecCCcc
Q 012191           14 RGVLHRDIKGSNLLVNNEGVLKLADFGLAN   43 (468)
Q Consensus        14 ~gIvHrDIKp~NILld~~g~vKL~DFGla~   43 (468)
                      .++||+|+.+.|||++ + .+.|+||+.+.
T Consensus       196 ~~liHgD~h~~NvL~~-d-~~~iIDFDd~~  223 (325)
T PRK11768        196 LLRLHGDCHPGNILWR-D-GPHFVDLDDAR  223 (325)
T ss_pred             ccceecCCCchhcccc-C-CcEEEeCCCCC
Confidence            4789999999999995 3 57899999763


No 486
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=81.46  E-value=1.6  Score=44.66  Aligned_cols=28  Identities=36%  Similarity=0.624  Sum_probs=24.7

Q ss_pred             CeeccCCCCceEECC-CCcEEEEecCCcc
Q 012191           16 VLHRDIKGSNLLVNN-EGVLKLADFGLAN   43 (468)
Q Consensus        16 IvHrDIKp~NILld~-~g~vKL~DFGla~   43 (468)
                      ++|.||.+.|||++. ++.++++||..|.
T Consensus       184 ~CHnDl~~~NiL~~~~~~~l~lID~EYag  212 (330)
T PLN02421        184 FAHNDLLSGNLMLNEDEGKLYFIDFEYGS  212 (330)
T ss_pred             EEECCCCcccEEEeCCCCcEEEEcccccC
Confidence            799999999999975 4789999999874


No 487
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=79.41  E-value=2.6  Score=43.41  Aligned_cols=36  Identities=19%  Similarity=0.392  Sum_probs=31.5

Q ss_pred             HHHHHHhCCCeeccCCCCceEECCCCcEEEEecCCc
Q 012191            7 GLEHCHSRGVLHRDIKGSNLLVNNEGVLKLADFGLA   42 (468)
Q Consensus         7 gL~yLHs~gIvHrDIKp~NILld~~g~vKL~DFGla   42 (468)
                      -+--|-.+|+||+|..-=||+++.++.++++||--.
T Consensus       214 ~Iv~la~~GlIHgDFNEFNimv~dd~~i~vIDFPQm  249 (465)
T KOG2268|consen  214 LIVRLANHGLIHGDFNEFNIMVKDDDKIVVIDFPQM  249 (465)
T ss_pred             HHHHHHHcCceecccchheeEEecCCCEEEeechHh
Confidence            345677899999999999999999999999999754


No 488
>PF02958 EcKinase:  Ecdysteroid kinase;  InterPro: IPR004119 This family includes proteins of unknown function. All known members of this group are proteins from drosophila and Caenorhabditis elegans.
Probab=77.30  E-value=1.4  Score=43.69  Aligned_cols=28  Identities=36%  Similarity=0.531  Sum_probs=23.7

Q ss_pred             CeeccCCCCceEECCC--C---cEEEEecCCcc
Q 012191           16 VLHRDIKGSNLLVNNE--G---VLKLADFGLAN   43 (468)
Q Consensus        16 IvHrDIKp~NILld~~--g---~vKL~DFGla~   43 (468)
                      ++|||++..|||+..+  |   .++++||-++.
T Consensus       217 l~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~~  249 (294)
T PF02958_consen  217 LCHGDFWTNNILFKYDDDGKPIDVVLIDFQLAR  249 (294)
T ss_pred             EEcCccCHHhEeEccccccccccceeecccccc
Confidence            8999999999999654  3   58999998764


No 489
>PF05445 Pox_ser-thr_kin:  Poxvirus serine/threonine protein kinase;  InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly. ; GO: 0004672 protein kinase activity, 0005524 ATP binding
Probab=76.70  E-value=1.5  Score=45.25  Aligned_cols=16  Identities=38%  Similarity=0.594  Sum_probs=14.0

Q ss_pred             CCCeeccCCCCceEEC
Q 012191           14 RGVLHRDIKGSNLLVN   29 (468)
Q Consensus        14 ~gIvHrDIKp~NILld   29 (468)
                      .+.+|-||||+|||+-
T Consensus       298 ~nF~H~DLKPdNILiF  313 (434)
T PF05445_consen  298 TNFLHVDLKPDNILIF  313 (434)
T ss_pred             ceeeecccCcCcEEEe
Confidence            3689999999999983


No 490
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=76.66  E-value=1.8  Score=45.53  Aligned_cols=28  Identities=29%  Similarity=0.462  Sum_probs=24.3

Q ss_pred             CCCeeccCCCCceEECCCCcEEEEecCCc
Q 012191           14 RGVLHRDIKGSNLLVNNEGVLKLADFGLA   42 (468)
Q Consensus        14 ~gIvHrDIKp~NILld~~g~vKL~DFGla   42 (468)
                      ..++|||+.+.|||+..+ .++|+||.++
T Consensus       223 ~~l~HgDl~~gni~~~~~-~~~viD~E~a  250 (401)
T PRK09550        223 EALLHGDLHTGSIFVTEE-ETKVIDPEFA  250 (401)
T ss_pred             CceeeccCCcccEEeeCC-CcEEEecccc
Confidence            469999999999999765 5899999866


No 491
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=75.74  E-value=3  Score=45.57  Aligned_cols=37  Identities=27%  Similarity=0.390  Sum_probs=30.2

Q ss_pred             HHhCCCeeccCCCCceEECC----CCcEEEEecCCccccCC
Q 012191           11 CHSRGVLHRDIKGSNLLVNN----EGVLKLADFGLANFSNT   47 (468)
Q Consensus        11 LHs~gIvHrDIKp~NILld~----~g~vKL~DFGla~~~~~   47 (468)
                      |=..|++|+|-+|.||++..    ++.+.+.|||+......
T Consensus       317 If~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~  357 (538)
T KOG1235|consen  317 IFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISH  357 (538)
T ss_pred             HHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccH
Confidence            33578999999999999984    56799999999865543


No 492
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=74.87  E-value=1.8  Score=44.95  Aligned_cols=29  Identities=24%  Similarity=0.438  Sum_probs=24.2

Q ss_pred             hCCCeeccCCCCceEECCCCcEEEEecCCc
Q 012191           13 SRGVLHRDIKGSNLLVNNEGVLKLADFGLA   42 (468)
Q Consensus        13 s~gIvHrDIKp~NILld~~g~vKL~DFGla   42 (468)
                      ...++||||.+.||+++.++ ++++|+.++
T Consensus       191 ~~~llHGDl~~gNi~~~~~~-~~~iD~e~~  219 (370)
T TIGR01767       191 AETLLHGDLHSGSIFVSEHE-TKVIDPEFA  219 (370)
T ss_pred             cceeeeccCCcccEEEcCCC-CEEEcCccc
Confidence            34699999999999997654 779998865


No 493
>PRK06149 hypothetical protein; Provisional
Probab=74.00  E-value=2.2  Score=50.06  Aligned_cols=31  Identities=23%  Similarity=0.277  Sum_probs=25.3

Q ss_pred             hCCCeeccCCCCceEECCCC--c---EEEEecCCcc
Q 012191           13 SRGVLHRDIKGSNLLVNNEG--V---LKLADFGLAN   43 (468)
Q Consensus        13 s~gIvHrDIKp~NILld~~g--~---vKL~DFGla~   43 (468)
                      ..++||+|+.+.|||++.+.  .   .-|+|||.+.
T Consensus       207 ~~g~IH~Dl~~~Nilv~~~~~~~~~v~giIDFgD~~  242 (972)
T PRK06149        207 PLQAVHLDITDDNVVGSRDADGRWQPDGVIDFGDLV  242 (972)
T ss_pred             cccccCCCCCcccEEEcCCCCCCcceeEEEEcccch
Confidence            36899999999999998652  3   4799999774


No 494
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=73.55  E-value=3.9  Score=42.66  Aligned_cols=29  Identities=34%  Similarity=0.628  Sum_probs=26.5

Q ss_pred             CCeeccCCCCceEECCCCcEEEEecCCccc
Q 012191           15 GVLHRDIKGSNLLVNNEGVLKLADFGLANF   44 (468)
Q Consensus        15 gIvHrDIKp~NILld~~g~vKL~DFGla~~   44 (468)
                      ..-|||+.-.||||+ +|.|.|+||-+++.
T Consensus       342 ~fehrnlt~~niLId-~GnvtLIDfklsRl  370 (488)
T COG5072         342 PFEHRNLTLDNILID-EGNVTLIDFKLSRL  370 (488)
T ss_pred             Ccccccccccceeee-cCceEEEEeeeeec
Confidence            467999999999999 99999999999873


No 495
>PRK12396 5-methylribose kinase; Reviewed
Probab=70.35  E-value=3.3  Score=43.66  Aligned_cols=28  Identities=25%  Similarity=0.487  Sum_probs=24.2

Q ss_pred             CCCeeccCCCCceEECCCCcEEEEecCCc
Q 012191           14 RGVLHRDIKGSNLLVNNEGVLKLADFGLA   42 (468)
Q Consensus        14 ~gIvHrDIKp~NILld~~g~vKL~DFGla   42 (468)
                      ..++||||+|.|||++.+ .+|++|..++
T Consensus       227 ~aLlHGDlHtGSI~v~~~-~~kvIDpEFA  254 (409)
T PRK12396        227 QALIHGDLHTGSVFVKND-STKVIDPEFA  254 (409)
T ss_pred             hhhccCcCCCCCEEecCC-ceEEEccccc
Confidence            459999999999999875 5899998776


No 496
>PLN02876 acyl-CoA dehydrogenase
Probab=63.40  E-value=5.4  Score=46.00  Aligned_cols=31  Identities=26%  Similarity=0.572  Sum_probs=25.2

Q ss_pred             CCeeccCCCCceEECCC-C-cEEEEecCCcccc
Q 012191           15 GVLHRDIKGSNLLVNNE-G-VLKLADFGLANFS   45 (468)
Q Consensus        15 gIvHrDIKp~NILld~~-g-~vKL~DFGla~~~   45 (468)
                      .+||+|+++.|||++.+ + .+-|.||+++..-
T Consensus       226 ~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~G  258 (822)
T PLN02876        226 GIVHGDFRIDNLVFHPTEDRVIGILDWELSTLG  258 (822)
T ss_pred             ceEecCcccccEEEcCCCCeEEEEEeeeccccC
Confidence            59999999999999753 3 3579999998643


No 497
>PF10707 YrbL-PhoP_reg:  PhoP regulatory network protein YrbL;  InterPro: IPR019647  This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner []. 
Probab=61.91  E-value=12  Score=35.42  Aligned_cols=33  Identities=24%  Similarity=0.299  Sum_probs=26.1

Q ss_pred             HHHHHHHhCCCeeccCCCCceEECCC--C--cEEEEe
Q 012191            6 HGLEHCHSRGVLHRDIKGSNLLVNNE--G--VLKLAD   38 (468)
Q Consensus         6 ~gL~yLHs~gIvHrDIKp~NILld~~--g--~vKL~D   38 (468)
                      +-..||-+.+|+.+||+|.||++...  +  .+.|+|
T Consensus       129 ~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~~~lvlID  165 (199)
T PF10707_consen  129 EFKRYLLDHHIVIRDLNPHNIVVQRRDSGEFRLVLID  165 (199)
T ss_pred             HHHHHHHHcCCeecCCCcccEEEEecCCCceEEEEEe
Confidence            34568889999999999999999543  2  477777


No 498
>PHA03111 Ser/Thr kinase; Provisional
Probab=61.47  E-value=6.4  Score=40.64  Aligned_cols=18  Identities=33%  Similarity=0.571  Sum_probs=14.9

Q ss_pred             CCCeeccCCCCceEECCC
Q 012191           14 RGVLHRDIKGSNLLVNNE   31 (468)
Q Consensus        14 ~gIvHrDIKp~NILld~~   31 (468)
                      .+.+|-||||+||||-+.
T Consensus       302 ~nF~H~DLKPdNILiFds  319 (444)
T PHA03111        302 DNFLHVDLKPDNILIFDS  319 (444)
T ss_pred             ceeeeccCCCCcEEEecC
Confidence            368999999999998443


No 499
>TIGR02457 TreS_Cterm trehalose synthase-fused probable maltokinase. Three pathways for the biosynthesis of trehalose, an osmoprotectant that in some species is also a precursor of certain cell wall glycolipids. Trehalose synthase, TreS, can interconvert maltose and trehalose, but while the equilibrium may favor trehalose, physiological concentrations of trehalose may be much greater than that of maltose and TreS may act largely in its degradation. This model describes a domain found only as a C-terminal fusion to TreS proteins. The most closely related proteins outside this family, Pep2 of Streptomyces coelicolor and Mak1 of Actinoplanes missouriensis, have known maltokinase activity. We suggest this domain acts as a maltokinase and helps drive conversion of trehalose to maltose.
Probab=59.11  E-value=7.4  Score=42.53  Aligned_cols=24  Identities=29%  Similarity=0.458  Sum_probs=20.9

Q ss_pred             eeccCCCCceEECCCCcEEEEecCC
Q 012191           17 LHRDIKGSNLLVNNEGVLKLADFGL   41 (468)
Q Consensus        17 vHrDIKp~NILld~~g~vKL~DFGl   41 (468)
                      ||+|++..|+|+..++.+ |+||.-
T Consensus       382 iHGD~HLgqvL~t~~d~~-IiDFEG  405 (528)
T TIGR02457       382 IHGDFHLGQVLVVQDDAV-LIDFEG  405 (528)
T ss_pred             EecCcchhcEEEeCCCeE-EEcCCC
Confidence            999999999999887655 999963


No 500
>PLN02756 S-methyl-5-thioribose kinase
Probab=56.96  E-value=7.3  Score=41.26  Aligned_cols=28  Identities=18%  Similarity=0.421  Sum_probs=23.5

Q ss_pred             CCCeeccCCCCceEECCCCcEEEEecCCc
Q 012191           14 RGVLHRDIKGSNLLVNNEGVLKLADFGLA   42 (468)
Q Consensus        14 ~gIvHrDIKp~NILld~~g~vKL~DFGla   42 (468)
                      ..++|+||.+.|||++.++ .+++|..++
T Consensus       230 ~~L~HGDl~~g~i~~~~~~-~~~id~ef~  257 (418)
T PLN02756        230 QALVHGDLHTGSVMVTPDS-TQVIDPEFA  257 (418)
T ss_pred             cceeecCCCCCcEEEcCCC-ceEecchhh
Confidence            3699999999999998865 888887655


Done!