Query 012194
Match_columns 468
No_of_seqs 141 out of 1553
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 04:37:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012194.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012194hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 6.3E-69 2.1E-73 527.1 37.8 442 3-463 3-453 (454)
2 2vch_A Hydroquinone glucosyltr 100.0 3.6E-61 1.2E-65 480.4 45.6 436 11-464 4-469 (480)
3 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 1.1E-61 3.9E-66 485.7 39.7 448 11-465 6-480 (482)
4 2c1x_A UDP-glucose flavonoid 3 100.0 3.8E-61 1.3E-65 477.2 37.5 438 12-467 6-455 (456)
5 2acv_A Triterpene UDP-glucosyl 100.0 1.5E-58 5.3E-63 459.7 41.6 431 12-464 8-463 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 8E-46 2.7E-50 366.8 31.6 388 5-443 4-405 (424)
7 4amg_A Snogd; transferase, pol 100.0 6E-45 2E-49 357.9 27.9 346 11-443 20-384 (400)
8 1iir_A Glycosyltransferase GTF 100.0 2E-43 6.9E-48 348.3 21.2 377 14-465 1-401 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 6.4E-42 2.2E-46 337.8 25.0 361 14-443 1-385 (416)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 1.1E-40 3.8E-45 329.1 32.5 374 11-459 18-409 (415)
11 3ia7_A CALG4; glycosysltransfe 100.0 6.4E-40 2.2E-44 322.2 34.5 361 12-443 3-382 (402)
12 3h4t_A Glycosyltransferase GTF 100.0 1.5E-40 5.2E-45 326.2 27.5 351 14-442 1-366 (404)
13 2yjn_A ERYCIII, glycosyltransf 100.0 6.6E-40 2.2E-44 325.8 29.7 376 11-464 18-435 (441)
14 2p6p_A Glycosyl transferase; X 100.0 1.7E-38 5.8E-43 310.1 29.9 358 14-465 1-381 (384)
15 2iyf_A OLED, oleandomycin glyc 100.0 7.4E-38 2.5E-42 310.3 32.9 362 12-443 6-383 (430)
16 4fzr_A SSFS6; structural genom 100.0 2.3E-38 7.8E-43 310.7 21.8 348 8-443 10-384 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 4.5E-37 1.6E-41 301.4 25.5 356 10-463 17-396 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 8.9E-36 3.1E-40 291.6 26.4 356 13-464 1-388 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 1.3E-33 4.3E-38 278.3 30.2 361 9-463 16-407 (412)
20 3s2u_A UDP-N-acetylglucosamine 100.0 3.9E-30 1.3E-34 248.1 25.5 309 14-425 3-325 (365)
21 2o6l_A UDP-glucuronosyltransfe 100.0 8.6E-28 3E-32 206.2 17.4 160 266-442 7-169 (170)
22 1f0k_A MURG, UDP-N-acetylgluco 99.9 2.4E-20 8.1E-25 180.1 24.4 305 14-425 7-324 (364)
23 3hbm_A UDP-sugar hydrolase; PS 99.7 1.4E-15 4.9E-20 139.1 18.3 116 279-403 156-274 (282)
24 2jzc_A UDP-N-acetylglucosamine 99.7 2.6E-16 8.8E-21 138.0 10.9 131 278-421 26-196 (224)
25 3c48_A Predicted glycosyltrans 99.5 7.7E-12 2.6E-16 123.4 31.1 374 11-465 18-428 (438)
26 3okp_A GDP-mannose-dependent a 99.5 3.3E-12 1.1E-16 124.0 25.3 328 11-436 2-357 (394)
27 3fro_A GLGA glycogen synthase; 99.5 1.1E-11 3.9E-16 122.1 28.9 370 12-438 1-411 (439)
28 2gek_A Phosphatidylinositol ma 99.5 3.3E-12 1.1E-16 124.6 21.8 165 282-465 209-386 (406)
29 1v4v_A UDP-N-acetylglucosamine 99.4 3.5E-11 1.2E-15 116.2 20.5 129 279-425 197-335 (376)
30 2r60_A Glycosyl transferase, g 99.4 1E-10 3.5E-15 117.5 23.7 117 332-464 333-461 (499)
31 2iuy_A Avigt4, glycosyltransfe 99.4 1.1E-11 3.7E-16 118.2 15.2 158 283-468 164-341 (342)
32 3ot5_A UDP-N-acetylglucosamine 99.3 1.5E-11 5E-16 119.6 16.3 130 279-425 223-362 (403)
33 2jjm_A Glycosyl transferase, g 99.3 4.7E-10 1.6E-14 109.0 25.9 333 13-437 15-364 (394)
34 2iw1_A Lipopolysaccharide core 99.3 2.5E-09 8.6E-14 102.8 29.5 143 280-438 195-352 (374)
35 3dzc_A UDP-N-acetylglucosamine 99.3 3E-10 1E-14 110.2 20.7 130 279-425 229-368 (396)
36 1vgv_A UDP-N-acetylglucosamine 99.3 4.2E-10 1.4E-14 108.9 21.0 130 279-425 204-343 (384)
37 3beo_A UDP-N-acetylglucosamine 99.2 4.8E-09 1.6E-13 101.0 25.4 130 279-425 204-343 (375)
38 2x6q_A Trehalose-synthase TRET 99.1 1.4E-08 4.8E-13 99.2 24.9 131 281-425 231-380 (416)
39 2hy7_A Glucuronosyltransferase 98.9 1.2E-06 4.1E-11 85.2 27.9 114 282-425 223-353 (406)
40 4hwg_A UDP-N-acetylglucosamine 98.9 5.7E-09 2E-13 100.4 11.0 131 280-425 203-343 (385)
41 1rzu_A Glycogen synthase 1; gl 98.9 3.6E-07 1.2E-11 91.1 23.8 131 282-425 292-444 (485)
42 3s28_A Sucrose synthase 1; gly 98.9 1.8E-07 6.2E-12 97.7 21.6 143 280-436 571-747 (816)
43 2qzs_A Glycogen synthase; glyc 98.9 7.6E-07 2.6E-11 88.7 25.3 134 280-425 291-445 (485)
44 3oy2_A Glycosyltransferase B73 98.8 3.5E-07 1.2E-11 89.1 19.5 131 280-425 183-356 (413)
45 2f9f_A First mannosyl transfer 98.8 4.5E-08 1.5E-12 83.5 11.1 139 282-437 24-173 (177)
46 2xci_A KDO-transferase, 3-deox 98.5 6.6E-06 2.3E-10 78.9 20.2 99 334-442 260-364 (374)
47 3qhp_A Type 1 capsular polysac 98.2 5.7E-06 2E-10 69.2 10.1 142 281-439 2-156 (166)
48 3vue_A GBSS-I, granule-bound s 98.2 0.00019 6.4E-09 72.1 21.8 137 280-423 326-476 (536)
49 2bfw_A GLGA glycogen synthase; 98.2 2.6E-05 8.9E-10 67.4 12.9 140 282-436 37-194 (200)
50 3q3e_A HMW1C-like glycosyltran 98.0 8.1E-05 2.8E-09 74.4 14.6 134 281-425 441-589 (631)
51 1psw_A ADP-heptose LPS heptosy 97.9 0.001 3.6E-08 62.7 19.4 103 14-141 1-106 (348)
52 3tov_A Glycosyl transferase fa 97.8 0.0017 5.7E-08 61.4 19.6 106 11-141 6-115 (349)
53 4gyw_A UDP-N-acetylglucosamine 97.8 0.00064 2.2E-08 70.7 17.7 137 278-425 520-669 (723)
54 2vsy_A XCC0866; transferase, g 97.8 0.00048 1.6E-08 69.8 16.3 83 334-425 434-523 (568)
55 3rhz_A GTF3, nucleotide sugar 97.6 0.00023 7.8E-09 66.9 10.2 148 281-462 178-337 (339)
56 2x0d_A WSAF; GT4 family, trans 97.1 0.00073 2.5E-08 65.5 6.7 80 333-425 294-380 (413)
57 2gt1_A Lipopolysaccharide hept 96.9 0.014 4.9E-07 54.2 14.1 133 279-425 177-323 (326)
58 2iz6_A Molybdenum cofactor car 93.2 1.4 4.9E-05 36.4 11.9 135 268-424 35-174 (176)
59 1uqt_A Alpha, alpha-trehalose- 91.7 1.5 5.1E-05 43.0 11.9 109 336-465 333-454 (482)
60 3t5t_A Putative glycosyltransf 91.6 1.2 4.1E-05 43.6 11.0 110 335-464 353-472 (496)
61 2phj_A 5'-nucleotidase SURE; S 90.3 2.5 8.5E-05 37.0 10.6 113 14-144 2-127 (251)
62 3nb0_A Glycogen [starch] synth 88.6 0.78 2.7E-05 46.5 6.9 46 334-381 490-551 (725)
63 2x0d_A WSAF; GT4 family, trans 87.9 0.26 8.8E-06 47.4 3.0 42 10-51 43-89 (413)
64 1j9j_A Stationary phase surviV 86.9 4.4 0.00015 35.4 9.9 115 14-144 1-128 (247)
65 2e6c_A 5'-nucleotidase SURE; S 85.7 8.8 0.0003 33.4 11.2 113 14-144 1-129 (244)
66 3fgn_A Dethiobiotin synthetase 85.6 2.3 7.9E-05 37.5 7.6 124 12-146 24-167 (251)
67 3qxc_A Dethiobiotin synthetase 84.9 2.5 8.5E-05 37.0 7.4 40 9-48 16-57 (242)
68 1g5t_A COB(I)alamin adenosyltr 84.4 7.4 0.00025 32.7 9.8 97 13-125 28-130 (196)
69 1l5x_A SurviVal protein E; str 82.5 7.6 0.00026 34.6 9.5 114 14-145 1-128 (280)
70 1ccw_A Protein (glutamate muta 81.2 2.2 7.7E-05 33.5 5.2 41 12-52 2-42 (137)
71 4dzz_A Plasmid partitioning pr 80.6 5.8 0.0002 33.2 8.1 38 14-51 1-40 (206)
72 2yxb_A Coenzyme B12-dependent 79.9 1.4 4.9E-05 35.8 3.7 42 11-52 16-57 (161)
73 3qjg_A Epidermin biosynthesis 78.9 2.9 9.9E-05 34.5 5.2 43 14-57 6-48 (175)
74 2vqe_B 30S ribosomal protein S 77.9 13 0.00045 32.5 9.3 31 116-146 159-191 (256)
75 3zqu_A Probable aromatic acid 77.4 2 6.8E-05 36.6 3.9 45 12-57 3-47 (209)
76 3bfv_A CAPA1, CAPB2, membrane 76.7 17 0.00059 32.2 10.2 41 12-52 80-122 (271)
77 4b4o_A Epimerase family protei 76.2 2.4 8.1E-05 38.3 4.4 32 14-49 1-32 (298)
78 1sbz_A Probable aromatic acid 75.7 2.2 7.4E-05 36.0 3.6 43 14-57 1-44 (197)
79 3l7i_A Teichoic acid biosynthe 75.3 5.2 0.00018 41.4 7.2 111 340-463 605-719 (729)
80 3zzm_A Bifunctional purine bio 75.0 2.1 7.3E-05 41.2 3.7 106 11-132 7-118 (523)
81 3cio_A ETK, tyrosine-protein k 74.5 20 0.00067 32.3 10.1 41 12-52 102-144 (299)
82 1mvl_A PPC decarboxylase athal 73.8 4.7 0.00016 34.3 5.3 45 11-57 17-61 (209)
83 2wqk_A 5'-nucleotidase SURE; S 73.3 36 0.0012 29.7 11.0 112 15-144 3-127 (251)
84 3ug7_A Arsenical pump-driving 72.9 11 0.00038 34.9 8.2 41 12-52 24-65 (349)
85 3ty2_A 5'-nucleotidase SURE; s 72.1 5 0.00017 35.3 5.1 117 8-144 6-135 (261)
86 3lqk_A Dipicolinate synthase s 71.0 4.7 0.00016 34.1 4.6 45 12-57 6-51 (201)
87 4gi5_A Quinone reductase; prot 70.8 6.3 0.00021 35.3 5.7 42 7-48 16-60 (280)
88 2q5c_A NTRC family transcripti 70.4 30 0.001 28.8 9.6 109 25-146 36-170 (196)
89 3rg8_A Phosphoribosylaminoimid 69.6 33 0.0011 27.5 8.9 133 282-444 4-149 (159)
90 1id1_A Putative potassium chan 68.3 4.2 0.00014 32.5 3.7 35 11-50 1-35 (153)
91 3auf_A Glycinamide ribonucleot 67.1 22 0.00074 30.7 8.1 106 12-146 21-133 (229)
92 1kjn_A MTH0777; hypotethical p 66.8 3.8 0.00013 32.3 2.8 98 13-142 6-109 (157)
93 2bw0_A 10-FTHFDH, 10-formyltet 66.7 20 0.00068 32.8 8.3 34 11-49 20-53 (329)
94 2r8r_A Sensor protein; KDPD, P 66.4 9 0.00031 33.0 5.5 41 11-51 4-44 (228)
95 1qzu_A Hypothetical protein MD 65.3 6.5 0.00022 33.3 4.4 46 11-57 17-63 (206)
96 3la6_A Tyrosine-protein kinase 65.1 50 0.0017 29.4 10.5 40 13-52 91-132 (286)
97 2i2x_B MTAC, methyltransferase 65.0 8.3 0.00028 34.0 5.2 43 11-53 121-163 (258)
98 3igf_A ALL4481 protein; two-do 64.8 9 0.00031 35.9 5.7 36 14-49 2-38 (374)
99 1y80_A Predicted cobalamin bin 64.7 7.6 0.00026 33.0 4.8 43 12-54 87-129 (210)
100 1yt5_A Inorganic polyphosphate 64.7 3.7 0.00013 36.3 2.9 53 350-424 41-96 (258)
101 3mcu_A Dipicolinate synthase, 63.2 7.3 0.00025 33.0 4.2 45 12-57 4-49 (207)
102 2ywr_A Phosphoribosylglycinami 62.6 21 0.00073 30.4 7.2 104 14-146 2-112 (216)
103 2vo1_A CTP synthase 1; pyrimid 62.3 8.4 0.00029 33.8 4.5 48 10-57 19-69 (295)
104 2i2c_A Probable inorganic poly 61.6 4.6 0.00016 36.0 2.9 53 350-424 35-93 (272)
105 1g63_A Epidermin modifying enz 61.4 8.9 0.0003 31.7 4.4 43 14-57 3-45 (181)
106 2a33_A Hypothetical protein; s 61.2 53 0.0018 27.9 9.3 102 269-380 36-147 (215)
107 2ejb_A Probable aromatic acid 60.4 9.3 0.00032 31.9 4.4 43 14-57 2-44 (189)
108 1p3y_1 MRSD protein; flavoprot 59.4 5.1 0.00017 33.6 2.6 44 13-57 8-51 (194)
109 1fmt_A Methionyl-tRNA FMet for 59.0 36 0.0012 30.9 8.5 34 12-50 2-35 (314)
110 3ghy_A Ketopantoate reductase 58.8 5.6 0.00019 36.6 3.1 41 12-57 2-42 (335)
111 3bbn_B Ribosomal protein S2; s 58.7 19 0.00064 31.0 6.0 30 116-145 158-189 (231)
112 3ezx_A MMCP 1, monomethylamine 58.7 10 0.00034 32.4 4.4 44 11-54 90-133 (215)
113 2hy5_A Putative sulfurtransfer 58.0 21 0.00073 27.4 5.9 44 14-57 1-48 (130)
114 3mc3_A DSRE/DSRF-like family p 57.8 20 0.0007 27.7 5.8 45 13-57 15-62 (134)
115 1rcu_A Conserved hypothetical 57.2 83 0.0029 26.1 10.3 96 268-380 48-150 (195)
116 3vot_A L-amino acid ligase, BL 56.9 63 0.0022 30.5 10.4 96 12-139 4-101 (425)
117 1lss_A TRK system potassium up 56.8 10 0.00035 29.2 4.0 33 13-50 4-36 (140)
118 1u0t_A Inorganic polyphosphate 56.7 4.8 0.00017 36.6 2.2 56 347-424 72-131 (307)
119 3kjh_A CO dehydrogenase/acetyl 56.2 8.5 0.00029 33.3 3.7 38 14-51 1-38 (254)
120 2an1_A Putative kinase; struct 55.7 8.5 0.00029 34.6 3.7 70 296-379 21-94 (292)
121 1ydh_A AT5G11950; structural g 55.1 40 0.0014 28.7 7.5 100 269-380 32-143 (216)
122 1z82_A Glycerol-3-phosphate de 54.8 8.5 0.00029 35.4 3.6 33 13-50 14-46 (335)
123 3q9l_A Septum site-determining 54.6 1E+02 0.0035 26.4 10.8 38 14-51 2-41 (260)
124 2g1u_A Hypothetical protein TM 54.0 15 0.00052 29.1 4.6 35 11-50 17-51 (155)
125 3hn2_A 2-dehydropantoate 2-red 53.7 13 0.00046 33.6 4.7 46 14-71 3-48 (312)
126 3h2s_A Putative NADH-flavin re 52.9 14 0.00046 31.3 4.4 33 14-50 1-33 (224)
127 1jkx_A GART;, phosphoribosylgl 52.8 63 0.0022 27.3 8.5 104 14-146 1-111 (212)
128 4ehi_A Bifunctional purine bio 52.8 13 0.00044 36.0 4.4 50 13-74 24-73 (534)
129 1xmp_A PURE, phosphoribosylami 52.8 90 0.0031 25.2 12.7 141 280-447 11-165 (170)
130 3ew7_A LMO0794 protein; Q8Y8U8 52.6 14 0.00048 31.1 4.4 33 14-50 1-33 (221)
131 1bg6_A N-(1-D-carboxylethyl)-L 52.1 9.9 0.00034 35.2 3.6 34 11-49 2-35 (359)
132 2ew2_A 2-dehydropantoate 2-red 52.0 9.8 0.00033 34.4 3.5 32 13-49 3-34 (316)
133 3lp6_A Phosphoribosylaminoimid 51.6 96 0.0033 25.2 11.4 140 281-444 8-156 (174)
134 3slg_A PBGP3 protein; structur 51.6 11 0.00038 34.9 3.9 42 5-50 16-58 (372)
135 3llv_A Exopolyphosphatase-rela 51.0 9.8 0.00034 29.6 2.9 33 13-50 6-38 (141)
136 3av3_A Phosphoribosylglycinami 50.8 60 0.002 27.4 8.0 104 14-146 4-114 (212)
137 3of5_A Dethiobiotin synthetase 50.6 16 0.00056 31.4 4.5 36 13-48 3-40 (228)
138 3i83_A 2-dehydropantoate 2-red 50.4 13 0.00043 34.0 4.0 38 14-57 3-40 (320)
139 2l2q_A PTS system, cellobiose- 50.4 20 0.0007 26.6 4.5 34 13-46 4-37 (109)
140 1hdo_A Biliverdin IX beta redu 50.3 19 0.00063 29.8 4.8 33 14-50 4-36 (206)
141 2d1p_A TUSD, hypothetical UPF0 50.1 42 0.0015 26.2 6.5 46 12-57 11-60 (140)
142 2gk4_A Conserved hypothetical 49.9 20 0.0007 30.9 4.9 26 24-51 28-53 (232)
143 1eiw_A Hypothetical protein MT 49.5 26 0.0009 26.2 4.9 65 348-423 36-109 (111)
144 3lrx_A Putative hydrogenase; a 49.2 16 0.00055 29.3 4.0 36 13-51 23-58 (158)
145 1wek_A Hypothetical protein TT 49.1 85 0.0029 26.6 8.7 101 268-380 59-170 (217)
146 3gpi_A NAD-dependent epimerase 49.1 20 0.00067 31.8 5.0 34 12-50 2-35 (286)
147 4hb9_A Similarities with proba 49.0 11 0.00038 35.3 3.5 30 14-48 2-31 (412)
148 4ds3_A Phosphoribosylglycinami 48.5 45 0.0015 28.1 6.8 109 9-146 3-118 (209)
149 3i6i_A Putative leucoanthocyan 48.4 13 0.00046 34.1 3.9 38 10-51 7-44 (346)
150 3sbx_A Putative uncharacterize 48.1 1.2E+02 0.004 25.1 10.3 99 270-380 36-146 (189)
151 4dll_A 2-hydroxy-3-oxopropiona 48.1 20 0.00068 32.6 4.9 34 11-49 29-62 (320)
152 3ors_A N5-carboxyaminoimidazol 47.9 1.1E+02 0.0036 24.6 9.8 138 281-445 4-155 (163)
153 3dqp_A Oxidoreductase YLBE; al 47.9 16 0.00055 30.8 4.0 33 14-50 1-33 (219)
154 3afo_A NADH kinase POS5; alpha 47.7 14 0.00049 34.7 3.8 61 342-424 106-171 (388)
155 3s2u_A UDP-N-acetylglucosamine 47.3 27 0.00094 32.3 5.9 26 350-377 92-120 (365)
156 3tov_A Glycosyl transferase fa 47.0 52 0.0018 30.2 7.7 101 14-146 186-290 (349)
157 3qua_A Putative uncharacterize 47.0 1.2E+02 0.0043 25.2 9.7 100 269-380 44-155 (199)
158 3ruf_A WBGU; rossmann fold, UD 46.9 17 0.00058 33.3 4.3 35 12-50 24-58 (351)
159 4eg0_A D-alanine--D-alanine li 46.0 29 0.00099 31.4 5.7 38 13-50 13-54 (317)
160 1evy_A Glycerol-3-phosphate de 45.9 8.5 0.00029 35.9 2.1 32 14-50 15-47 (366)
161 3eag_A UDP-N-acetylmuramate:L- 45.8 21 0.00072 32.6 4.7 33 13-49 4-36 (326)
162 1sb8_A WBPP; epimerase, 4-epim 45.7 19 0.00065 33.0 4.5 35 11-49 25-59 (352)
163 1p9o_A Phosphopantothenoylcyst 45.6 15 0.00051 33.4 3.5 39 14-52 37-90 (313)
164 1ks9_A KPA reductase;, 2-dehyd 45.6 16 0.00054 32.5 3.8 32 14-50 1-32 (291)
165 3bgw_A DNAB-like replicative h 45.6 12 0.00041 36.0 3.1 42 13-54 197-238 (444)
166 4iin_A 3-ketoacyl-acyl carrier 45.5 26 0.00089 30.8 5.2 45 2-49 16-61 (271)
167 2x4g_A Nucleoside-diphosphate- 45.4 21 0.00071 32.5 4.7 35 12-50 12-46 (342)
168 3pdi_B Nitrogenase MOFE cofact 44.7 1.5E+02 0.0053 28.3 10.8 89 12-143 312-400 (458)
169 3e8x_A Putative NAD-dependent 44.7 17 0.00059 31.0 3.8 37 10-50 18-54 (236)
170 1t35_A Hypothetical protein YV 44.6 92 0.0031 25.8 8.0 102 268-380 23-135 (191)
171 3kuu_A Phosphoribosylaminoimid 44.5 1.3E+02 0.0043 24.5 11.3 142 281-448 13-167 (174)
172 2vsy_A XCC0866; transferase, g 44.4 25 0.00086 34.7 5.4 40 11-50 203-246 (568)
173 3qvl_A Putative hydantoin race 43.8 1.1E+02 0.0037 26.5 8.8 38 13-50 1-39 (245)
174 3dfu_A Uncharacterized protein 43.8 15 0.0005 31.8 3.0 33 12-49 5-37 (232)
175 3k96_A Glycerol-3-phosphate de 43.6 14 0.0005 34.2 3.2 34 12-50 28-61 (356)
176 3hwr_A 2-dehydropantoate 2-red 43.6 16 0.00055 33.2 3.5 42 11-57 17-58 (318)
177 3l4e_A Uncharacterized peptida 43.5 44 0.0015 28.1 6.0 47 268-314 16-62 (206)
178 3lyu_A Putative hydrogenase; t 42.7 24 0.00084 27.6 4.1 35 14-51 19-53 (142)
179 3sbx_A Putative uncharacterize 42.7 33 0.0011 28.4 5.0 39 11-50 11-53 (189)
180 3qha_A Putative oxidoreductase 42.4 14 0.00048 33.2 2.9 32 13-49 15-46 (296)
181 1tvm_A PTS system, galactitol- 42.2 32 0.0011 25.7 4.4 37 12-48 20-57 (113)
182 2h31_A Multifunctional protein 41.8 1.6E+02 0.0054 27.9 9.9 137 279-444 264-412 (425)
183 1ehi_A LMDDL2, D-alanine:D-lac 41.8 24 0.00083 32.9 4.6 38 12-49 2-44 (377)
184 3da8_A Probable 5'-phosphoribo 41.4 56 0.0019 27.7 6.3 108 10-146 9-121 (215)
185 1psw_A ADP-heptose LPS heptosy 41.4 34 0.0011 31.2 5.5 100 15-144 182-288 (348)
186 2r85_A PURP protein PF1517; AT 41.3 22 0.00075 32.3 4.1 33 13-51 2-34 (334)
187 1e2b_A Enzyme IIB-cellobiose; 41.3 58 0.002 23.9 5.7 37 12-48 2-38 (106)
188 2lpm_A Two-component response 41.0 19 0.00064 27.5 3.0 40 102-143 42-86 (123)
189 4b4k_A N5-carboxyaminoimidazol 40.7 1.5E+02 0.005 24.2 11.7 143 280-447 22-176 (181)
190 2pn1_A Carbamoylphosphate synt 40.4 30 0.001 31.3 4.9 34 11-50 2-37 (331)
191 3goc_A Endonuclease V; alpha-b 40.2 46 0.0016 28.6 5.5 39 102-143 97-142 (237)
192 2a33_A Hypothetical protein; s 40.2 36 0.0012 28.9 4.9 40 11-50 10-54 (215)
193 1dhr_A Dihydropteridine reduct 39.9 31 0.0011 29.5 4.7 34 13-49 6-39 (241)
194 3l4b_C TRKA K+ channel protien 39.8 12 0.00042 31.7 2.0 32 14-50 1-32 (218)
195 1p3y_1 MRSD protein; flavoprot 39.7 1.2E+02 0.004 25.2 7.9 137 282-424 11-186 (194)
196 2zqe_A MUTS2 protein; alpha/be 39.6 3.2 0.00011 29.4 -1.5 57 297-365 20-77 (83)
197 3ic5_A Putative saccharopine d 39.6 25 0.00084 25.9 3.5 33 13-50 5-38 (118)
198 1jx7_A Hypothetical protein YC 39.6 46 0.0016 24.6 5.1 43 15-57 3-50 (117)
199 3kkl_A Probable chaperone prot 39.5 49 0.0017 28.7 5.8 38 14-51 4-52 (244)
200 2c5m_A CTP synthase; cytidine 39.5 22 0.00074 31.1 3.3 44 12-55 21-67 (294)
201 3tqr_A Phosphoribosylglycinami 39.1 77 0.0026 26.8 6.8 105 12-146 4-115 (215)
202 3qjg_A Epidermin biosynthesis 39.0 98 0.0034 25.2 7.2 112 281-397 7-141 (175)
203 4huj_A Uncharacterized protein 38.5 16 0.00056 31.0 2.6 34 11-49 21-54 (220)
204 3doj_A AT3G25530, dehydrogenas 38.3 25 0.00087 31.7 4.0 33 12-49 20-52 (310)
205 3fwz_A Inner membrane protein 38.3 19 0.00066 27.9 2.8 34 13-51 7-40 (140)
206 1e4e_A Vancomycin/teicoplanin 38.3 21 0.00073 32.7 3.5 38 12-49 2-43 (343)
207 2a5l_A Trp repressor binding p 38.2 39 0.0013 27.9 4.9 40 11-50 3-43 (200)
208 2w36_A Endonuclease V; hypoxan 38.1 50 0.0017 28.2 5.4 30 115-144 103-139 (225)
209 3gk3_A Acetoacetyl-COA reducta 37.8 32 0.0011 30.2 4.5 38 10-50 21-58 (269)
210 2yvu_A Probable adenylyl-sulfa 37.6 42 0.0014 27.3 5.0 51 1-51 1-51 (186)
211 3nbm_A PTS system, lactose-spe 37.5 49 0.0017 24.5 4.7 39 10-48 3-41 (108)
212 2z1m_A GDP-D-mannose dehydrata 37.4 29 0.00098 31.5 4.3 34 13-50 3-36 (345)
213 1q1v_A DEK protein; winged-hel 37.3 67 0.0023 21.6 4.9 55 407-463 10-66 (70)
214 2i87_A D-alanine-D-alanine lig 37.2 18 0.00062 33.5 2.9 38 12-49 2-43 (364)
215 3cky_A 2-hydroxymethyl glutara 37.1 34 0.0012 30.5 4.7 33 12-49 3-35 (301)
216 2raf_A Putative dinucleotide-b 37.0 25 0.00087 29.6 3.5 34 11-49 17-50 (209)
217 3q0i_A Methionyl-tRNA formyltr 36.8 45 0.0015 30.3 5.3 34 11-49 5-38 (318)
218 1weh_A Conserved hypothetical 36.7 95 0.0032 25.1 6.8 99 268-379 23-134 (171)
219 3s40_A Diacylglycerol kinase; 36.7 32 0.0011 30.9 4.4 80 282-380 12-97 (304)
220 3dfz_A SIRC, precorrin-2 dehyd 36.7 1.3E+02 0.0044 25.6 7.9 145 279-443 31-185 (223)
221 2pzm_A Putative nucleotide sug 36.4 32 0.0011 31.1 4.4 35 11-49 18-52 (330)
222 2b69_A UDP-glucuronate decarbo 36.2 34 0.0012 31.2 4.5 35 11-49 25-59 (343)
223 4dim_A Phosphoribosylglycinami 36.2 34 0.0011 32.1 4.6 36 11-51 5-40 (403)
224 2qs7_A Uncharacterized protein 36.2 48 0.0017 26.0 4.8 43 15-57 9-52 (144)
225 2xj4_A MIPZ; replication, cell 36.0 37 0.0013 30.1 4.7 38 14-51 4-43 (286)
226 4id9_A Short-chain dehydrogena 35.8 27 0.00092 31.8 3.8 39 8-50 14-52 (347)
227 3e5n_A D-alanine-D-alanine lig 35.8 25 0.00084 33.1 3.5 44 7-50 16-63 (386)
228 1pno_A NAD(P) transhydrogenase 35.7 38 0.0013 27.2 3.9 40 12-51 22-64 (180)
229 3g0o_A 3-hydroxyisobutyrate de 35.7 20 0.0007 32.2 2.9 33 12-49 6-38 (303)
230 1gsa_A Glutathione synthetase; 35.6 30 0.001 30.9 4.1 37 14-50 2-41 (316)
231 2hmt_A YUAA protein; RCK, KTN, 35.6 23 0.00078 27.2 2.8 32 14-50 7-38 (144)
232 1u11_A PURE (N5-carboxyaminoim 35.5 1.8E+02 0.0062 23.7 11.4 139 281-447 22-175 (182)
233 4e21_A 6-phosphogluconate dehy 35.5 26 0.00091 32.5 3.6 35 11-50 20-54 (358)
234 3ego_A Probable 2-dehydropanto 35.3 20 0.00067 32.4 2.7 33 13-51 2-34 (307)
235 1jay_A Coenzyme F420H2:NADP+ o 35.3 30 0.001 29.0 3.7 31 14-49 1-32 (212)
236 1d4o_A NADP(H) transhydrogenas 35.2 39 0.0013 27.2 3.9 39 13-51 22-63 (184)
237 3l77_A Short-chain alcohol deh 35.1 42 0.0015 28.5 4.8 34 14-50 2-35 (235)
238 3pfn_A NAD kinase; structural 34.9 21 0.00072 33.1 2.8 33 345-379 103-139 (365)
239 4g65_A TRK system potassium up 34.6 12 0.00042 36.2 1.2 34 12-50 2-35 (461)
240 2dpo_A L-gulonate 3-dehydrogen 34.6 25 0.00087 32.0 3.3 35 11-50 4-38 (319)
241 3bul_A Methionine synthase; tr 34.6 38 0.0013 33.7 4.7 45 12-56 97-141 (579)
242 3ahc_A Phosphoketolase, xylulo 34.6 3.4E+02 0.012 28.3 11.8 93 345-450 716-813 (845)
243 4g6h_A Rotenone-insensitive NA 34.5 23 0.00078 34.6 3.2 36 11-51 40-75 (502)
244 1jzt_A Hypothetical 27.5 kDa p 34.4 30 0.001 30.1 3.6 33 14-49 59-93 (246)
245 1xfi_A Unknown protein; struct 34.3 44 0.0015 31.1 4.9 39 13-51 212-251 (367)
246 3foj_A Uncharacterized protein 34.3 74 0.0025 22.7 5.3 34 12-49 55-88 (100)
247 3f67_A Putative dienelactone h 34.3 52 0.0018 27.5 5.2 36 14-49 32-67 (241)
248 3trh_A Phosphoribosylaminoimid 34.2 1.8E+02 0.0063 23.4 12.6 143 281-444 7-157 (169)
249 1txg_A Glycerol-3-phosphate de 34.0 22 0.00077 32.3 2.9 31 14-49 1-31 (335)
250 3kcq_A Phosphoribosylglycinami 34.0 79 0.0027 26.8 6.0 101 12-146 7-114 (215)
251 3o1l_A Formyltetrahydrofolate 33.9 2.4E+02 0.0083 25.2 9.6 106 11-146 103-213 (302)
252 3dhn_A NAD-dependent epimerase 33.9 38 0.0013 28.4 4.3 33 14-50 5-37 (227)
253 3d3j_A Enhancer of mRNA-decapp 33.8 32 0.0011 31.1 3.7 34 14-50 133-168 (306)
254 2bka_A CC3, TAT-interacting pr 33.7 27 0.00093 29.8 3.3 36 11-50 16-53 (242)
255 3enk_A UDP-glucose 4-epimerase 33.7 39 0.0013 30.6 4.5 33 13-49 5-37 (341)
256 3zq6_A Putative arsenical pump 33.5 54 0.0018 29.7 5.4 41 11-51 10-52 (324)
257 2pju_A Propionate catabolism o 33.3 45 0.0015 28.5 4.4 30 350-382 63-92 (225)
258 3d7l_A LIN1944 protein; APC893 33.3 43 0.0015 27.6 4.4 33 12-49 2-34 (202)
259 3d3k_A Enhancer of mRNA-decapp 33.0 33 0.0011 30.1 3.7 34 14-50 86-121 (259)
260 3end_A Light-independent proto 33.0 47 0.0016 29.7 4.9 39 12-50 39-78 (307)
261 3guy_A Short-chain dehydrogena 33.0 36 0.0012 28.9 3.9 34 14-50 1-34 (230)
262 3dtt_A NADP oxidoreductase; st 32.9 35 0.0012 29.5 3.8 36 10-50 16-51 (245)
263 2h78_A Hibadh, 3-hydroxyisobut 32.8 34 0.0012 30.6 3.9 32 13-49 3-34 (302)
264 3i1j_A Oxidoreductase, short c 32.7 29 0.00098 29.8 3.3 34 14-50 14-47 (247)
265 3pef_A 6-phosphogluconate dehy 32.6 37 0.0013 30.1 4.1 31 14-49 2-32 (287)
266 4h15_A Short chain alcohol deh 32.5 45 0.0015 29.3 4.5 32 15-49 12-43 (261)
267 1v5e_A Pyruvate oxidase; oxido 32.5 66 0.0023 32.1 6.3 27 350-378 68-100 (590)
268 2pju_A Propionate catabolism o 32.4 45 0.0016 28.5 4.3 41 99-144 140-180 (225)
269 2qyt_A 2-dehydropantoate 2-red 32.4 17 0.00057 32.9 1.7 32 13-49 8-45 (317)
270 3awd_A GOX2181, putative polyo 32.3 52 0.0018 28.4 4.9 33 15-50 14-46 (260)
271 2qv7_A Diacylglycerol kinase D 32.3 50 0.0017 30.2 4.9 81 282-380 28-114 (337)
272 3obb_A Probable 3-hydroxyisobu 32.3 44 0.0015 30.0 4.5 30 14-48 4-33 (300)
273 2fsv_C NAD(P) transhydrogenase 32.3 45 0.0016 27.4 3.9 39 13-51 46-87 (203)
274 1qkk_A DCTD, C4-dicarboxylate 32.0 1.7E+02 0.0057 22.3 11.5 48 371-424 74-121 (155)
275 1mio_A Nitrogenase molybdenum 31.9 1.7E+02 0.0059 28.6 9.0 36 12-52 334-369 (533)
276 3tl4_X Glutaminyl-tRNA synthet 31.9 46 0.0016 27.5 4.1 74 383-466 100-181 (187)
277 1djl_A Transhydrogenase DIII; 31.7 47 0.0016 27.4 3.9 39 13-51 45-86 (207)
278 3i12_A D-alanine-D-alanine lig 31.6 32 0.0011 31.9 3.5 40 11-50 1-44 (364)
279 3g79_A NDP-N-acetyl-D-galactos 31.5 48 0.0016 32.1 4.8 36 11-51 16-53 (478)
280 3i4f_A 3-oxoacyl-[acyl-carrier 31.5 47 0.0016 28.8 4.5 35 13-50 6-40 (264)
281 2bi7_A UDP-galactopyranose mut 31.4 34 0.0012 32.0 3.7 35 12-51 2-36 (384)
282 1ozh_A ALS, acetolactate synth 31.4 80 0.0027 31.3 6.6 28 349-378 72-105 (566)
283 3oh8_A Nucleoside-diphosphate 31.3 44 0.0015 32.7 4.7 34 13-50 147-180 (516)
284 3r5x_A D-alanine--D-alanine li 31.3 34 0.0012 30.6 3.6 41 12-52 2-46 (307)
285 1sez_A Protoporphyrinogen oxid 31.1 31 0.0011 33.4 3.6 45 1-50 1-45 (504)
286 2o8n_A APOA-I binding protein; 31.1 40 0.0014 29.7 3.9 34 14-50 80-115 (265)
287 4egf_A L-xylulose reductase; s 31.0 47 0.0016 29.0 4.4 33 15-50 21-53 (266)
288 1u7z_A Coenzyme A biosynthesis 30.8 57 0.0019 27.9 4.6 21 31-51 38-58 (226)
289 1mv8_A GMD, GDP-mannose 6-dehy 30.7 45 0.0015 31.8 4.5 31 14-49 1-31 (436)
290 1y1p_A ARII, aldehyde reductas 30.7 51 0.0018 29.7 4.8 36 11-50 9-44 (342)
291 2vns_A Metalloreductase steap3 30.6 33 0.0011 29.0 3.2 33 12-49 27-59 (215)
292 2fb6_A Conserved hypothetical 30.6 47 0.0016 25.0 3.7 42 13-54 7-52 (117)
293 3f6r_A Flavodoxin; FMN binding 30.5 70 0.0024 24.7 5.0 39 14-52 2-41 (148)
294 3eme_A Rhodanese-like domain p 30.4 70 0.0024 22.9 4.6 39 12-55 55-93 (103)
295 1zi8_A Carboxymethylenebutenol 30.4 68 0.0023 26.6 5.3 36 14-49 28-63 (236)
296 1rw7_A YDR533CP; alpha-beta sa 30.3 92 0.0032 26.7 6.1 38 14-51 4-52 (243)
297 3l3b_A ES1 family protein; ssg 30.2 92 0.0032 26.9 6.0 38 14-52 24-66 (242)
298 4ezb_A Uncharacterized conserv 30.2 34 0.0012 31.0 3.4 32 13-49 24-56 (317)
299 3g17_A Similar to 2-dehydropan 30.2 15 0.00051 33.0 0.9 32 14-50 3-34 (294)
300 2r6a_A DNAB helicase, replicat 30.2 58 0.002 31.2 5.2 40 14-53 204-244 (454)
301 1fjh_A 3alpha-hydroxysteroid d 30.1 61 0.0021 27.8 5.0 33 14-49 1-33 (257)
302 1kyq_A Met8P, siroheme biosynt 30.0 2.6E+02 0.009 24.5 9.0 151 279-444 13-210 (274)
303 4e5v_A Putative THUA-like prot 30.0 61 0.0021 28.8 4.9 38 12-50 3-43 (281)
304 2zki_A 199AA long hypothetical 30.0 50 0.0017 27.2 4.2 38 13-51 4-42 (199)
305 1yb4_A Tartronic semialdehyde 29.8 36 0.0012 30.2 3.5 30 14-48 4-33 (295)
306 1ydg_A Trp repressor binding p 29.7 67 0.0023 26.7 5.0 38 12-49 5-43 (211)
307 1fy2_A Aspartyl dipeptidase; s 29.7 1.4E+02 0.0049 25.3 7.2 86 267-379 21-120 (229)
308 3ga2_A Endonuclease V; alpha-b 29.7 58 0.002 28.2 4.4 39 102-143 99-144 (246)
309 3alj_A 2-methyl-3-hydroxypyrid 29.7 37 0.0013 31.5 3.6 34 11-49 9-42 (379)
310 1f0y_A HCDH, L-3-hydroxyacyl-C 29.6 33 0.0011 30.7 3.2 33 13-50 15-47 (302)
311 3dm5_A SRP54, signal recogniti 29.5 69 0.0024 30.6 5.5 42 13-54 100-141 (443)
312 4e3z_A Putative oxidoreductase 29.5 58 0.002 28.4 4.8 37 10-49 22-58 (272)
313 2gf2_A Hibadh, 3-hydroxyisobut 29.4 33 0.0011 30.5 3.2 31 14-49 1-31 (296)
314 2bln_A Protein YFBG; transfera 29.3 1.3E+02 0.0044 27.0 7.0 32 14-50 1-32 (305)
315 2bru_C NAD(P) transhydrogenase 29.1 44 0.0015 27.0 3.3 39 13-51 30-71 (186)
316 2rh8_A Anthocyanidin reductase 29.1 52 0.0018 29.7 4.5 33 13-49 9-41 (338)
317 3vps_A TUNA, NAD-dependent epi 29.0 35 0.0012 30.5 3.3 34 13-50 7-40 (321)
318 2afh_E Nitrogenase iron protei 29.0 57 0.002 28.8 4.7 37 14-50 2-39 (289)
319 4grd_A N5-CAIR mutase, phospho 29.0 2.3E+02 0.0078 22.9 11.8 146 279-446 11-165 (173)
320 2vrn_A Protease I, DR1199; cys 28.9 1.2E+02 0.004 24.7 6.4 41 10-51 6-46 (190)
321 4e12_A Diketoreductase; oxidor 28.9 45 0.0015 29.6 3.9 32 13-49 4-35 (283)
322 2y0c_A BCEC, UDP-glucose dehyd 28.7 40 0.0014 32.7 3.8 34 12-50 7-40 (478)
323 1rkx_A CDP-glucose-4,6-dehydra 28.7 45 0.0015 30.5 4.1 36 11-50 7-42 (357)
324 1meo_A Phosophoribosylglycinam 28.7 1.9E+02 0.0066 24.2 7.6 107 14-145 1-110 (209)
325 3sju_A Keto reductase; short-c 28.5 58 0.002 28.6 4.6 37 11-50 21-57 (279)
326 3ko8_A NAD-dependent epimerase 28.5 48 0.0017 29.5 4.1 32 14-49 1-32 (312)
327 3hly_A Flavodoxin-like domain; 28.4 75 0.0026 25.2 4.9 38 14-51 1-39 (161)
328 2bon_A Lipid kinase; DAG kinas 28.4 77 0.0026 28.8 5.5 79 282-381 33-119 (332)
329 3qsg_A NAD-binding phosphogluc 28.3 31 0.0011 31.2 2.8 33 12-49 23-56 (312)
330 3n7t_A Macrophage binding prot 28.3 1E+02 0.0035 26.7 6.0 38 14-51 10-58 (247)
331 4gkb_A 3-oxoacyl-[acyl-carrier 28.1 52 0.0018 28.8 4.1 34 15-51 8-41 (258)
332 3r6d_A NAD-dependent epimerase 28.1 60 0.002 27.1 4.5 20 31-50 19-39 (221)
333 1i36_A Conserved hypothetical 27.8 30 0.001 30.2 2.5 29 14-47 1-29 (264)
334 3n0v_A Formyltetrahydrofolate 27.7 3.2E+02 0.011 24.1 10.4 106 11-146 88-198 (286)
335 4ao6_A Esterase; hydrolase, th 27.6 50 0.0017 28.5 4.0 38 13-50 55-94 (259)
336 2zyd_A 6-phosphogluconate dehy 27.6 33 0.0011 33.3 3.0 35 10-49 12-46 (480)
337 1iow_A DD-ligase, DDLB, D-ALA\ 27.6 71 0.0024 28.3 5.1 38 13-50 2-43 (306)
338 3qrx_B Melittin; calcium-bindi 27.6 16 0.00055 18.6 0.3 17 361-377 1-17 (26)
339 1ydh_A AT5G11950; structural g 27.6 70 0.0024 27.1 4.6 39 12-50 7-50 (216)
340 2xdo_A TETX2 protein; tetracyc 27.4 46 0.0016 31.1 3.9 35 11-50 24-58 (398)
341 1qyd_A Pinoresinol-lariciresin 27.3 52 0.0018 29.3 4.1 34 13-50 4-37 (313)
342 3qd7_X Uncharacterized protein 27.2 7.3 0.00025 30.6 -1.5 61 298-365 64-126 (137)
343 3pid_A UDP-glucose 6-dehydroge 27.2 43 0.0015 31.9 3.6 33 12-50 35-67 (432)
344 2lnd_A De novo designed protei 27.1 71 0.0024 21.8 3.6 48 371-423 50-100 (112)
345 1rpn_A GDP-mannose 4,6-dehydra 27.1 57 0.002 29.3 4.4 35 12-50 13-47 (335)
346 2ywx_A Phosphoribosylaminoimid 27.1 2.4E+02 0.0081 22.4 12.2 136 283-444 2-144 (157)
347 4gbj_A 6-phosphogluconate dehy 27.1 55 0.0019 29.3 4.2 30 14-48 6-35 (297)
348 2f1k_A Prephenate dehydrogenas 26.9 44 0.0015 29.3 3.5 31 14-49 1-31 (279)
349 1qgu_B Protein (nitrogenase mo 26.9 2.7E+02 0.0091 27.2 9.3 36 12-52 359-394 (519)
350 1g8m_A Aicar transformylase-IM 26.9 28 0.00096 34.2 2.2 90 28-130 16-110 (593)
351 3ka7_A Oxidoreductase; structu 26.9 39 0.0013 31.8 3.3 32 14-50 1-32 (425)
352 1e6u_A GDP-fucose synthetase; 26.9 41 0.0014 30.1 3.4 33 12-48 2-34 (321)
353 1zmt_A Haloalcohol dehalogenas 26.8 55 0.0019 28.3 4.1 33 14-49 1-33 (254)
354 3gg2_A Sugar dehydrogenase, UD 26.7 43 0.0015 32.2 3.5 32 14-50 3-34 (450)
355 1f4p_A Flavodoxin; electron tr 26.7 55 0.0019 25.3 3.7 37 14-50 1-38 (147)
356 3ld9_A DTMP kinase, thymidylat 26.7 42 0.0014 28.7 3.1 48 1-48 9-57 (223)
357 3l6d_A Putative oxidoreductase 26.3 33 0.0011 30.9 2.5 33 12-49 8-40 (306)
358 4gwg_A 6-phosphogluconate dehy 26.3 39 0.0013 32.8 3.1 34 11-49 2-35 (484)
359 2iz1_A 6-phosphogluconate dehy 26.2 39 0.0013 32.7 3.2 34 11-49 3-36 (474)
360 1byi_A Dethiobiotin synthase; 26.2 60 0.0021 27.2 4.1 33 15-47 3-36 (224)
361 2qx0_A 7,8-dihydro-6-hydroxyme 26.1 1.2E+02 0.0042 24.1 5.6 29 282-310 3-31 (159)
362 4e5s_A MCCFLIKE protein (BA_56 26.1 85 0.0029 28.6 5.3 72 294-380 63-136 (331)
363 1f9y_A HPPK, protein (6-hydrox 26.1 94 0.0032 24.8 4.8 28 282-309 2-29 (158)
364 3ius_A Uncharacterized conserv 25.9 59 0.002 28.4 4.2 33 14-51 6-38 (286)
365 2q6t_A DNAB replication FORK h 25.8 91 0.0031 29.7 5.7 40 15-54 202-242 (444)
366 2v4n_A Multifunctional protein 25.8 91 0.0031 27.2 5.1 112 13-144 1-126 (254)
367 3gem_A Short chain dehydrogena 25.8 55 0.0019 28.5 3.9 33 15-50 28-60 (260)
368 3qua_A Putative uncharacterize 25.8 97 0.0033 25.8 5.1 38 12-50 21-62 (199)
369 3c85_A Putative glutathione-re 25.6 43 0.0015 27.2 3.0 34 12-50 38-72 (183)
370 3lf2_A Short chain oxidoreduct 25.5 63 0.0021 28.1 4.2 33 15-50 9-41 (265)
371 3pfb_A Cinnamoyl esterase; alp 25.4 95 0.0033 26.3 5.4 37 14-50 46-84 (270)
372 2uyy_A N-PAC protein; long-cha 25.4 53 0.0018 29.5 3.8 33 12-49 29-61 (316)
373 2ixd_A LMBE-related protein; h 25.3 68 0.0023 27.7 4.3 38 12-49 2-39 (242)
374 3lk7_A UDP-N-acetylmuramoylala 25.3 71 0.0024 30.6 4.8 33 12-49 8-40 (451)
375 3pdu_A 3-hydroxyisobutyrate de 25.3 45 0.0015 29.5 3.2 31 14-49 2-32 (287)
376 2hy5_B Intracellular sulfur ox 25.3 1.5E+02 0.0051 22.8 5.9 44 15-58 7-53 (136)
377 3nrn_A Uncharacterized protein 25.3 46 0.0016 31.3 3.5 32 14-50 1-32 (421)
378 4fbl_A LIPS lipolytic enzyme; 25.2 43 0.0015 29.3 3.1 32 17-48 54-85 (281)
379 1xrs_B D-lysine 5,6-aminomutas 25.1 35 0.0012 30.0 2.3 44 12-55 119-171 (262)
380 2wtm_A EST1E; hydrolase; 1.60A 25.1 98 0.0034 26.1 5.4 35 14-48 27-63 (251)
381 2rjn_A Response regulator rece 25.1 1.4E+02 0.0049 22.7 6.0 48 371-424 78-126 (154)
382 2q1w_A Putative nucleotide sug 24.9 69 0.0024 28.9 4.5 34 13-50 21-54 (333)
383 1qyc_A Phenylcoumaran benzylic 24.9 61 0.0021 28.7 4.1 33 14-50 5-37 (308)
384 2hun_A 336AA long hypothetical 24.8 55 0.0019 29.5 3.9 34 12-49 2-37 (336)
385 4dmm_A 3-oxoacyl-[acyl-carrier 24.8 77 0.0026 27.7 4.7 33 14-49 28-60 (269)
386 2f62_A Nucleoside 2-deoxyribos 24.8 1.5E+02 0.0052 23.6 5.9 86 280-379 10-105 (161)
387 3f8d_A Thioredoxin reductase ( 24.8 53 0.0018 29.2 3.7 32 14-50 16-47 (323)
388 4dlp_A Aminoacyl-tRNA syntheta 24.8 63 0.0022 31.8 4.4 41 10-50 21-71 (536)
389 2jae_A L-amino acid oxidase; o 24.7 48 0.0016 32.0 3.6 35 11-50 9-43 (489)
390 2dkn_A 3-alpha-hydroxysteroid 24.7 85 0.0029 26.7 5.0 33 14-49 1-33 (255)
391 2o6l_A UDP-glucuronosyltransfe 24.7 1.3E+02 0.0043 23.7 5.7 39 13-51 20-61 (170)
392 2rcy_A Pyrroline carboxylate r 24.7 25 0.00085 30.7 1.4 33 12-49 3-39 (262)
393 1vdc_A NTR, NADPH dependent th 24.7 26 0.00088 31.7 1.5 32 13-49 8-39 (333)
394 3czc_A RMPB; alpha/beta sandwi 24.6 91 0.0031 23.0 4.3 37 12-48 17-55 (110)
395 3tem_A Ribosyldihydronicotinam 24.6 90 0.0031 26.6 4.9 37 13-49 1-40 (228)
396 1xgk_A Nitrogen metabolite rep 24.6 64 0.0022 29.6 4.3 34 13-50 5-38 (352)
397 2c5a_A GDP-mannose-3', 5'-epim 24.4 76 0.0026 29.3 4.8 34 13-50 29-62 (379)
398 3gk5_A Uncharacterized rhodane 24.4 1.1E+02 0.0037 22.2 4.8 40 12-56 54-93 (108)
399 3eya_A Pyruvate dehydrogenase 24.3 81 0.0028 31.1 5.2 29 349-379 65-99 (549)
400 3u7q_B Nitrogenase molybdenum- 24.3 5E+02 0.017 25.2 11.0 35 12-51 363-397 (523)
401 2p5y_A UDP-glucose 4-epimerase 24.3 63 0.0022 28.7 4.1 32 14-49 1-32 (311)
402 2gkg_A Response regulator homo 24.2 1.3E+02 0.0043 21.7 5.3 47 371-424 79-125 (127)
403 2c20_A UDP-glucose 4-epimerase 24.1 70 0.0024 28.6 4.4 32 14-49 2-33 (330)
404 2q62_A ARSH; alpha/beta, flavo 24.1 83 0.0028 27.2 4.6 39 11-49 32-73 (247)
405 3rd5_A Mypaa.01249.C; ssgcid, 24.1 82 0.0028 27.8 4.8 33 15-50 17-49 (291)
406 3hn7_A UDP-N-acetylmuramate-L- 24.0 63 0.0022 31.7 4.3 34 12-49 18-51 (524)
407 3dkr_A Esterase D; alpha beta 24.0 64 0.0022 26.8 3.9 35 14-48 22-56 (251)
408 3pxx_A Carveol dehydrogenase; 24.0 92 0.0031 27.2 5.1 32 15-49 11-42 (287)
409 2x5n_A SPRPN10, 26S proteasome 23.9 1.1E+02 0.0037 25.3 5.1 63 13-75 106-173 (192)
410 3c1o_A Eugenol synthase; pheny 23.8 53 0.0018 29.4 3.5 34 14-51 5-38 (321)
411 4g81_D Putative hexonate dehyd 23.8 68 0.0023 28.0 4.0 32 15-49 10-41 (255)
412 3iwh_A Rhodanese-like domain p 23.6 2E+02 0.007 20.6 6.1 41 12-57 55-95 (103)
413 1vpd_A Tartronate semialdehyde 23.6 76 0.0026 28.1 4.5 31 14-49 6-36 (299)
414 1imj_A CIB, CCG1-interacting f 23.6 1.2E+02 0.0041 24.4 5.6 39 13-51 31-71 (210)
415 3qbc_A 2-amino-4-hydroxy-6-hyd 23.5 1.1E+02 0.0039 24.4 4.9 28 282-309 6-33 (161)
416 4f0j_A Probable hydrolytic enz 23.3 73 0.0025 27.7 4.3 38 14-51 46-83 (315)
417 2ydy_A Methionine adenosyltran 23.3 71 0.0024 28.4 4.2 31 14-48 3-33 (315)
418 4fu0_A D-alanine--D-alanine li 23.2 55 0.0019 30.1 3.5 38 11-48 1-42 (357)
419 3dqz_A Alpha-hydroxynitrIle ly 23.2 48 0.0016 27.9 3.0 36 15-50 5-40 (258)
420 3l18_A Intracellular protease 23.1 1.8E+02 0.0061 22.9 6.3 38 13-51 2-39 (168)
421 3sc6_A DTDP-4-dehydrorhamnose 22.9 30 0.001 30.5 1.5 32 14-49 6-37 (287)
422 1z0s_A Probable inorganic poly 22.9 90 0.0031 27.6 4.6 33 10-46 26-58 (278)
423 3rp8_A Flavoprotein monooxygen 22.9 57 0.002 30.5 3.6 35 11-50 21-55 (407)
424 3ea0_A ATPase, para family; al 22.9 68 0.0023 27.2 3.9 40 13-52 3-45 (245)
425 1cp2_A CP2, nitrogenase iron p 22.8 82 0.0028 27.3 4.5 36 15-50 3-38 (269)
426 4h1h_A LMO1638 protein; MCCF-l 22.7 1.1E+02 0.0037 27.8 5.3 69 294-377 63-133 (327)
427 1cbk_A Protein (7,8-dihydro-6- 22.7 1.2E+02 0.004 24.3 4.8 29 282-310 3-31 (160)
428 3nva_A CTP synthase; rossman f 22.7 86 0.003 30.6 4.7 44 13-56 2-48 (535)
429 2wsb_A Galactitol dehydrogenas 22.6 1E+02 0.0034 26.3 5.0 33 15-50 12-44 (254)
430 1wv9_A Rhodanese homolog TT165 22.6 88 0.003 21.9 3.8 30 14-47 54-83 (94)
431 3grc_A Sensor protein, kinase; 22.6 2.3E+02 0.008 20.8 7.8 49 371-424 79-127 (140)
432 3ono_A Ribose/galactose isomer 22.6 81 0.0028 26.6 3.9 38 12-49 2-41 (214)
433 2rir_A Dipicolinate synthase, 22.6 1.1E+02 0.0039 27.1 5.4 33 11-48 5-37 (300)
434 1mxh_A Pteridine reductase 2; 22.5 92 0.0031 27.1 4.7 32 15-49 12-43 (276)
435 4f6c_A AUSA reductase domain p 22.4 52 0.0018 31.1 3.2 38 11-52 67-104 (427)
436 3nrb_A Formyltetrahydrofolate 22.4 4E+02 0.014 23.5 11.8 109 11-146 86-197 (287)
437 3k3p_A D-alanine--D-alanine li 22.4 56 0.0019 30.5 3.4 43 8-50 32-78 (383)
438 2fx5_A Lipase; alpha-beta hydr 22.4 65 0.0022 27.5 3.7 37 13-49 48-84 (258)
439 2xxa_A Signal recognition part 22.2 1.2E+02 0.0041 28.8 5.7 41 14-54 101-142 (433)
440 3dfi_A Pseudoaglycone deacetyl 22.2 1.1E+02 0.0036 27.0 5.0 40 12-51 6-45 (270)
441 4dqx_A Probable oxidoreductase 22.2 88 0.003 27.4 4.5 34 14-50 27-60 (277)
442 1wcv_1 SOJ, segregation protei 22.1 81 0.0028 27.2 4.2 39 13-51 5-45 (257)
443 3ci9_A Heat shock factor-bindi 22.1 62 0.0021 20.0 2.3 37 410-451 3-39 (48)
444 3ip0_A 2-amino-4-hydroxy-6-hyd 22.1 1.3E+02 0.0043 24.1 4.9 29 282-310 2-30 (158)
445 2ahr_A Putative pyrroline carb 22.0 58 0.002 28.2 3.2 32 13-49 3-34 (259)
446 2q1s_A Putative nucleotide sug 21.9 82 0.0028 29.0 4.5 34 12-49 31-65 (377)
447 1q6z_A BFD, BFDC, benzoylforma 21.8 84 0.0029 30.7 4.7 74 299-378 6-95 (528)
448 3iwt_A 178AA long hypothetical 21.8 64 0.0022 26.2 3.2 42 6-48 8-60 (178)
449 3c24_A Putative oxidoreductase 21.8 61 0.0021 28.6 3.4 31 14-49 12-43 (286)
450 1yb1_A 17-beta-hydroxysteroid 21.7 96 0.0033 27.0 4.7 33 15-50 32-64 (272)
451 3q94_A Fructose-bisphosphate a 21.7 1.9E+02 0.0065 25.7 6.4 24 267-291 161-184 (288)
452 2x6t_A ADP-L-glycero-D-manno-h 21.7 67 0.0023 29.3 3.8 36 12-51 45-81 (357)
453 1yqg_A Pyrroline-5-carboxylate 21.7 40 0.0014 29.3 2.1 31 14-49 1-32 (263)
454 1u9c_A APC35852; structural ge 21.7 1.7E+02 0.0057 24.5 6.1 38 14-51 6-52 (224)
455 3lq1_A 2-succinyl-5-enolpyruvy 21.7 1.3E+02 0.0044 29.8 6.1 29 349-379 73-107 (578)
456 1o4v_A Phosphoribosylaminoimid 21.7 3.3E+02 0.011 22.2 12.6 138 280-447 13-165 (183)
457 3m2p_A UDP-N-acetylglucosamine 21.6 69 0.0024 28.5 3.8 33 14-50 3-35 (311)
458 3un1_A Probable oxidoreductase 21.6 78 0.0027 27.5 4.0 33 14-49 28-60 (260)
459 1wrd_A TOM1, target of MYB pro 21.6 1.6E+02 0.0054 21.5 5.0 29 409-443 3-31 (103)
460 3qvo_A NMRA family protein; st 21.5 73 0.0025 27.0 3.8 34 14-50 23-57 (236)
461 1orr_A CDP-tyvelose-2-epimeras 21.5 84 0.0029 28.3 4.4 32 14-49 2-33 (347)
462 1udb_A Epimerase, UDP-galactos 21.5 66 0.0023 29.0 3.7 31 14-48 1-31 (338)
463 1i24_A Sulfolipid biosynthesis 21.5 82 0.0028 29.2 4.4 34 12-49 10-43 (404)
464 1js1_X Transcarbamylase; alpha 21.3 93 0.0032 28.2 4.4 39 14-52 169-207 (324)
465 4hs4_A Chromate reductase; tri 21.3 52 0.0018 27.4 2.7 36 10-45 3-40 (199)
466 3h7a_A Short chain dehydrogena 21.3 1.1E+02 0.0037 26.3 4.9 34 14-50 7-40 (252)
467 2vou_A 2,6-dihydroxypyridine h 21.3 72 0.0025 29.7 4.0 34 12-50 4-37 (397)
468 3icc_A Putative 3-oxoacyl-(acy 21.2 1.3E+02 0.0045 25.6 5.4 34 14-50 7-40 (255)
469 1lld_A L-lactate dehydrogenase 21.2 52 0.0018 29.6 2.8 35 12-51 6-42 (319)
470 3sty_A Methylketone synthase 1 21.2 83 0.0028 26.5 4.1 36 15-50 13-48 (267)
471 3dff_A Teicoplanin pseudoaglyc 21.2 1E+02 0.0035 27.1 4.7 40 12-51 6-45 (273)
472 1ek6_A UDP-galactose 4-epimera 21.2 84 0.0029 28.4 4.3 32 14-49 3-34 (348)
473 3oow_A Phosphoribosylaminoimid 21.2 3.2E+02 0.011 21.9 12.9 145 281-448 6-160 (166)
474 2iht_A Carboxyethylarginine sy 21.1 2.1E+02 0.0073 28.2 7.5 75 297-378 14-105 (573)
475 3dme_A Conserved exported prot 21.1 63 0.0022 29.4 3.5 33 13-50 4-36 (369)
476 3l6e_A Oxidoreductase, short-c 21.1 1E+02 0.0036 26.1 4.7 34 14-50 3-36 (235)
477 1g3q_A MIND ATPase, cell divis 21.1 1E+02 0.0035 25.9 4.7 37 15-51 3-41 (237)
478 1n57_A Chaperone HSP31, protei 20.9 1.5E+02 0.0051 26.3 5.8 40 13-52 48-100 (291)
479 3d59_A Platelet-activating fac 20.9 77 0.0026 29.3 4.1 39 13-51 97-135 (383)
480 3gvc_A Oxidoreductase, probabl 20.8 1.1E+02 0.0038 26.8 4.9 33 15-50 30-62 (277)
481 3tqq_A Methionyl-tRNA formyltr 20.8 85 0.0029 28.4 4.1 32 13-49 2-33 (314)
482 3nhv_A BH2092 protein; alpha-b 20.8 1.3E+02 0.0045 23.2 4.8 42 12-56 71-112 (144)
483 3ppi_A 3-hydroxyacyl-COA dehyd 20.7 1.1E+02 0.0038 26.6 4.9 32 15-49 31-62 (281)
484 2yjz_A Metalloreductase steap4 26.1 21 0.00072 29.9 0.0 34 11-49 17-50 (201)
485 1wma_A Carbonyl reductase [NAD 20.5 1.1E+02 0.0039 26.2 4.9 34 14-50 4-38 (276)
486 3rfo_A Methionyl-tRNA formyltr 20.5 98 0.0034 28.0 4.5 34 12-50 3-36 (317)
487 1vco_A CTP synthetase; tetrame 20.5 1.5E+02 0.0053 29.1 6.1 58 14-71 12-72 (550)
488 2ag5_A DHRS6, dehydrogenase/re 20.5 91 0.0031 26.6 4.2 32 15-49 7-38 (246)
489 3kkj_A Amine oxidase, flavin-c 20.5 54 0.0019 27.9 2.8 30 15-49 4-33 (336)
490 3o26_A Salutaridine reductase; 20.4 1E+02 0.0036 27.1 4.8 35 13-50 11-45 (311)
491 1cyd_A Carbonyl reductase; sho 20.4 1.1E+02 0.0039 25.7 4.8 35 12-50 6-40 (244)
492 3sxp_A ADP-L-glycero-D-mannohe 20.4 69 0.0024 29.3 3.6 36 11-50 8-45 (362)
493 2ph1_A Nucleotide-binding prot 20.4 1.2E+02 0.004 26.3 4.9 39 14-52 18-58 (262)
494 3io3_A DEHA2D07832P; chaperone 20.3 1E+02 0.0036 28.2 4.7 41 11-51 15-58 (348)
495 3edm_A Short chain dehydrogena 20.3 97 0.0033 26.7 4.4 32 15-49 9-40 (259)
496 3r1i_A Short-chain type dehydr 20.3 94 0.0032 27.2 4.3 33 15-50 33-65 (276)
497 3itj_A Thioredoxin reductase 1 20.2 51 0.0018 29.6 2.6 33 13-50 22-54 (338)
498 3vis_A Esterase; alpha/beta-hy 20.2 1.1E+02 0.0036 27.1 4.7 35 14-48 96-130 (306)
499 3g5j_A Putative ATP/GTP bindin 20.2 1.3E+02 0.0043 22.5 4.6 32 14-49 90-122 (134)
500 1mkz_A Molybdenum cofactor bio 20.1 1.6E+02 0.0056 23.6 5.4 38 10-47 7-47 (172)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=6.3e-69 Score=527.13 Aligned_cols=442 Identities=25% Similarity=0.409 Sum_probs=353.5
Q ss_pred hhhhhhhcCCCcEEEEEcCCCccCHHHHHHHHHHHHhCC--CeEEEEeCCccccccccCCCCCCCCeEEEEcCCCCCCCC
Q 012194 3 NIEKKAASCRLVHCLVLSYPAQGHINPLLQFAKRLDHKG--LKVTLVTTYFISKSLHRDSSSSSASIALEAISDGYDQGG 80 (468)
Q Consensus 3 ~~~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rG--h~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~~~~~~~~ 80 (468)
..+.+|+..++.||+++|+++.||++|++.||+.|+++| +.|||++++.+...+.+......++++|..+|+++++ +
T Consensus 3 ~~~~~M~~~~~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~~~~~~i~~~~ipdglp~-~ 81 (454)
T 3hbf_A 3 TFKNEMNGNNLLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSNEFLPNIKYYNVHDGLPK-G 81 (454)
T ss_dssp ---------CCCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSSCCCTTEEEEECCCCCCT-T
T ss_pred cccccccCCCCCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccccCCCCceEEecCCCCCC-C
Confidence 334445566788999999999999999999999999999 9999999986665554321112357999999998877 4
Q ss_pred CCccccHHHHHHHHHHhchHHHHHHHHHhcCC-CCCccEEEeCCCcchHHHHHHHcCCceEEEcccchHHHHHHHHhhc-
Q 012194 81 SAQAESIEAYLEKFWQIGPRSLCELVEKMNGS-VVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQSCAVDCIYYHVNK- 158 (468)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~p~DlVI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~- 158 (468)
.+...+....+..+.......+++.++++.++ ..++|+||+|.++.|+..+|+++|||++.+++++++.++.+.+...
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~ 161 (454)
T 3hbf_A 82 YVSSGNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLI 161 (454)
T ss_dssp CCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHH
T ss_pred ccccCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHH
Confidence 33333333444444444455566666664321 2467999999999999999999999999999999998887766421
Q ss_pred -cCCC---CCCCCCccccCCCCCCCCCCCCcccccCCCchhHHHHHHHHHhhcccccCeEEecchhhchHHHHHHHhccC
Q 012194 159 -GLLK---LPLPDSQLLLPGMPPLEPQDMPSFVYDLGSYPAVSDMVVKYQFDNIDKADWVLCNTFYELEEEVAEWLGKLW 234 (468)
Q Consensus 159 -~~~~---~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~ 234 (468)
.... .........+||+|.+..++++.++.. .....+.+.+.+ ......+.+++++||+++||++..+.+....
T Consensus 162 ~~~~~~~~~~~~~~~~~iPg~p~~~~~dlp~~~~~-~~~~~~~~~~~~-~~~~~~~~~~vl~ns~~eLE~~~~~~~~~~~ 239 (454)
T 3hbf_A 162 REKTGSKEVHDVKSIDVLPGFPELKASDLPEGVIK-DIDVPFATMLHK-MGLELPRANAVAINSFATIHPLIENELNSKF 239 (454)
T ss_dssp HHTCCHHHHTTSSCBCCSTTSCCBCGGGSCTTSSS-CTTSHHHHHHHH-HHHHGGGSSCEEESSCGGGCHHHHHHHHTTS
T ss_pred HhhcCCCccccccccccCCCCCCcChhhCchhhcc-CCchHHHHHHHH-HHHhhccCCEEEECChhHhCHHHHHHHHhcC
Confidence 1111 111112234899998888888877653 333446666666 6677888999999999999998888777655
Q ss_pred -CceeecccCCCcccccccCCccccCCcCCCCChhhHhHhhhcCCCCceEEEEecCcCCCCHHHHHHHHHHHHhCCCeEE
Q 012194 235 -SLKTIGPTVPSLYLDKQLEDDKDYGFSMFKPDNESCIKWLNDRAKGSVVYVSFGSYAPLKVEEMEELAWGLKATNQYFL 313 (468)
Q Consensus 235 -p~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i 313 (468)
++++|||+++... .. ..+.+.++.+||+.++++++|||||||+...+.+++.+++.++++.+++||
T Consensus 240 ~~v~~vGPl~~~~~-------~~------~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l~~~~~~fl 306 (454)
T 3hbf_A 240 KLLLNVGPFNLTTP-------QR------KVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESLEECGFPFI 306 (454)
T ss_dssp SCEEECCCHHHHSC-------CS------CCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHCCCEE
T ss_pred CCEEEECCcccccc-------cc------cccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHHHhCCCeEE
Confidence 4999999864310 00 011246789999998889999999999998889999999999999999999
Q ss_pred EEEeCCccCCCCcchhhhccCCeEEEeecchHHHhcccCcceeeecCCcchHHHHHHcCCceeecccccchhHHHHHHHh
Q 012194 314 WVVRESEQAKLPENFSDETSQKGLVVNWCPQLEVLAHEAAGCFLTHCGWNSTMEALSLGVPMVAMPQWSDQSTNGKYIMD 393 (468)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~I~HgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~l~~ 393 (468)
|+++....+.+|++|.++.++|+++++|+||.+||+|+++++||||||+||++||+++|||||++|++.||+.||+++++
T Consensus 307 w~~~~~~~~~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~~DQ~~Na~~v~~ 386 (454)
T 3hbf_A 307 WSFRGDPKEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFFGDQGLNTILTES 386 (454)
T ss_dssp EECCSCHHHHSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT
T ss_pred EEeCCcchhcCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCcccccHHHHHHHHHH
Confidence 99987765668889988999999999999999999999988899999999999999999999999999999999999999
Q ss_pred hhcceeEecCCCCCccCHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 012194 394 VWKMGLKVPADEKGIVRREAIAHCISEILEGERGKEIRQNAGKWSNFAKEAVAKGGSSDKNIDDFVANLI 463 (468)
Q Consensus 394 ~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~l~ 463 (468)
.||+|+.+... .++.++|.++|+++|+|+++++||+||+++++.+++++.+|||+.+++++|++++.
T Consensus 387 ~~g~Gv~l~~~---~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i~ 453 (454)
T 3hbf_A 387 VLEIGVGVDNG---VLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIVT 453 (454)
T ss_dssp TSCSEEECGGG---SCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHT
T ss_pred hhCeeEEecCC---CCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHHh
Confidence 55999999865 89999999999999998767799999999999999999999999999999999874
No 2
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=3.6e-61 Score=480.38 Aligned_cols=436 Identities=30% Similarity=0.490 Sum_probs=325.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCc--cccccccCCCCCCCCeEEEEcCCCCCCCCCCccccH
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHK-GLKVTLVTTYF--ISKSLHRDSSSSSASIALEAISDGYDQGGSAQAESI 87 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~--~~~~~~~~~~~~~~~i~f~~~~~~~~~~~~~~~~~~ 87 (468)
.+++||+++|+++.||++|+++||++|++| ||+|||++++. +...+++.......+++|++++..... ......+.
T Consensus 4 ~~~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~-~~~~~~~~ 82 (480)
T 2vch_A 4 SKTPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDSLPSSISSVFLPPVDLT-DLSSSTRI 82 (480)
T ss_dssp --CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-CCTTEEEEECCCCCCT-TSCTTCCH
T ss_pred CCCcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccccCCCceEEEcCCCCCC-CCCCchhH
Confidence 355899999999999999999999999998 99999999987 444444210011248999999864322 11111233
Q ss_pred HHHHHHHHHhchHHHHHHHHHhcCCCCCc-cEEEeCCCcchHHHHHHHcCCceEEEcccchHHHHHHHHhh--c--cCCC
Q 012194 88 EAYLEKFWQIGPRSLCELVEKMNGSVVPV-DCIVYDSFLPWALDVAKKFGLVGAAFLTQSCAVDCIYYHVN--K--GLLK 162 (468)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~l~~l~~~~~p~-DlVI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~--~--~~~~ 162 (468)
...+........+.++++++.+.. ..++ |+||+|.++.|+..+|+++|||++.+++++++..+.+.+++ . ...+
T Consensus 83 ~~~~~~~~~~~~~~l~~ll~~~~~-~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (480)
T 2vch_A 83 ESRISLTVTRSNPELRKVFDSFVE-GGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCE 161 (480)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHH-TTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCSC
T ss_pred HHHHHHHHHhhhHHHHHHHHHhcc-CCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCCc
Confidence 333333334456677777777632 2457 99999999989999999999999999999987766655432 1 1111
Q ss_pred CCCCCCccccCCCCCCCCCCCCcccccCCCchhHHHHHHHHHhhcccccCeEEecchhhchHHHHHHHhc----cCCcee
Q 012194 163 LPLPDSQLLLPGMPPLEPQDMPSFVYDLGSYPAVSDMVVKYQFDNIDKADWVLCNTFYELEEEVAEWLGK----LWSLKT 238 (468)
Q Consensus 163 ~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~----~~p~~~ 238 (468)
+.........|+++++...+++..+.... ......+.+ ....+.+..++++|++.++|+.....+.+ ..++++
T Consensus 162 ~~~~~~~~~~Pg~~p~~~~~l~~~~~~~~--~~~~~~~~~-~~~~~~~~~g~~~nt~~ele~~~~~~l~~~~~~~~~v~~ 238 (480)
T 2vch_A 162 FRELTEPLMLPGCVPVAGKDFLDPAQDRK--DDAYKWLLH-NTKRYKEAEGILVNTFFELEPNAIKALQEPGLDKPPVYP 238 (480)
T ss_dssp GGGCSSCBCCTTCCCBCGGGSCGGGSCTT--SHHHHHHHH-HHHHGGGCSEEEESCCTTTSHHHHHHHHSCCTTCCCEEE
T ss_pred ccccCCcccCCCCCCCChHHCchhhhcCC--chHHHHHHH-HHHhcccCCEEEEcCHHHHhHHHHHHHHhcccCCCcEEE
Confidence 10001123467777666666665443221 123333444 44556677889999999999887777654 235899
Q ss_pred ecccCCCcccccccCCccccCCcCCCCChhhHhHhhhcCCCCceEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeC
Q 012194 239 IGPTVPSLYLDKQLEDDKDYGFSMFKPDNESCIKWLNDRAKGSVVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRE 318 (468)
Q Consensus 239 vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~ 318 (468)
|||++.... ... . .+.+.++.+||+.++++++|||||||+...+.+++..++.+|++.+++|||+++.
T Consensus 239 vGpl~~~~~------~~~-----~-~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~lw~~~~ 306 (480)
T 2vch_A 239 VGPLVNIGK------QEA-----K-QTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRS 306 (480)
T ss_dssp CCCCCCCSC------SCC-----------CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred Eeccccccc------ccc-----C-ccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHHhcCCcEEEEECC
Confidence 999975410 000 0 1225678999999888899999999999888899999999999999999999976
Q ss_pred Ccc----------------CCCCcchhhhccCCeEEEe-ecchHHHhcccCcceeeecCCcchHHHHHHcCCceeecccc
Q 012194 319 SEQ----------------AKLPENFSDETSQKGLVVN-WCPQLEVLAHEAAGCFLTHCGWNSTMEALSLGVPMVAMPQW 381 (468)
Q Consensus 319 ~~~----------------~~~~~~~~~~~~~nv~~~~-~vpq~~lL~~~~~~~~I~HgG~~s~~Eal~~GvP~l~~P~~ 381 (468)
... ..+|+++.++..++.+++. |+||.+||+|+++++||||||+||++||+++|||||++|++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal~~GvP~i~~P~~ 386 (480)
T 2vch_A 307 PSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWPLY 386 (480)
T ss_dssp CCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS
T ss_pred ccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHHHcCCCEEecccc
Confidence 421 2366777666666667776 99999999999998999999999999999999999999999
Q ss_pred cchhHHHHHH-HhhhcceeEecCCCCCccCHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q 012194 382 SDQSTNGKYI-MDVWKMGLKVPADEKGIVRREAIAHCISEILEGERGKEIRQNAGKWSNFAKEAVAKGGSSDKNIDDFVA 460 (468)
Q Consensus 382 ~DQ~~na~~l-~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~ 460 (468)
.||+.||+++ ++. |+|+.+...+++.+++++|.++|+++|+++++++||+||+++++.+++++.+||++..++++|++
T Consensus 387 ~DQ~~na~~l~~~~-G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~~~~~v~ 465 (480)
T 2vch_A 387 AEQKMNAVLLSEDI-RAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDGTSTKALSLVAL 465 (480)
T ss_dssp TTHHHHHHHHHHTT-CCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHh-CeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 9999999997 688 99999976434478999999999999985544699999999999999999999999999999999
Q ss_pred HHHh
Q 012194 461 NLIS 464 (468)
Q Consensus 461 ~l~~ 464 (468)
.|.+
T Consensus 466 ~~~~ 469 (480)
T 2vch_A 466 KWKA 469 (480)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9864
No 3
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=1.1e-61 Score=485.73 Aligned_cols=448 Identities=30% Similarity=0.592 Sum_probs=331.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCC---C-CCCeEEEEcCCCCCCCC--CCcc
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSS---S-SASIALEAISDGYDQGG--SAQA 84 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~---~-~~~i~f~~~~~~~~~~~--~~~~ 84 (468)
++++||+++|+++.||++|++.||++|++|||+|||++++.+...+.+.... . ..+++|.++|++++... ....
T Consensus 6 ~~~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~ 85 (482)
T 2pq6_A 6 NRKPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVS 85 (482)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------
T ss_pred CCCCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcc
Confidence 4468999999999999999999999999999999999999876655432000 0 13899999997666511 1112
Q ss_pred ccHHHHHHHHHHhchHHHHHHHHHhcCC--CCCccEEEeCCCcchHHHHHHHcCCceEEEcccchHHHHHHHHhh----c
Q 012194 85 ESIEAYLEKFWQIGPRSLCELVEKMNGS--VVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQSCAVDCIYYHVN----K 158 (468)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~--~~p~DlVI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~----~ 158 (468)
.+...++..+...+...++++++.+..+ ..++|+||+|.++.|+..+|+++|||++.++++++...+.+.++. .
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~ 165 (482)
T 2pq6_A 86 QDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVER 165 (482)
T ss_dssp CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHT
T ss_pred hhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhc
Confidence 3444455555455677888888887642 246799999999999999999999999999999987665443221 1
Q ss_pred cCCCCCCC---------CCccccCCCCCCCCCCCCcccccCCCchhHHHHHHHHHhhcccccCeEEecchhhchHHHHHH
Q 012194 159 GLLKLPLP---------DSQLLLPGMPPLEPQDMPSFVYDLGSYPAVSDMVVKYQFDNIDKADWVLCNTFYELEEEVAEW 229 (468)
Q Consensus 159 ~~~~~p~~---------~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~ 229 (468)
+..+.... .....+|+++.+...+++.+.........+.+.+.. ..+...+.+.+++|++++||++..+.
T Consensus 166 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~vl~nt~~~le~~~~~~ 244 (482)
T 2pq6_A 166 GIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIE-VADRVNKDTTILLNTFNELESDVINA 244 (482)
T ss_dssp TCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHH-HHHTCCTTCCEEESSCGGGGHHHHHH
T ss_pred CCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHH-HHHhhccCCEEEEcChHHHhHHHHHH
Confidence 22221110 011124666555555555444332222334444444 45566778899999999999987776
Q ss_pred HhccC-CceeecccCCCcccccccCCccccCCcCCCCChhhHhHhhhcCCCCceEEEEecCcCCCCHHHHHHHHHHHHhC
Q 012194 230 LGKLW-SLKTIGPTVPSLYLDKQLEDDKDYGFSMFKPDNESCIKWLNDRAKGSVVYVSFGSYAPLKVEEMEELAWGLKAT 308 (468)
Q Consensus 230 ~~~~~-p~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~is~Gs~~~~~~~~~~~~~~a~~~~ 308 (468)
++... ++++|||+++..........+...+.++|.. ..++.+|++.++++++|||||||....+.+.+..++.+|++.
T Consensus 245 ~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~ 323 (482)
T 2pq6_A 245 LSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKE-DTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANC 323 (482)
T ss_dssp HHTTCTTEEECCCHHHHHHTSTTGGGGCC----------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHhCCcEEEEcCCccccccccccccccccccccccc-chHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHHhc
Confidence 66544 4999999864200000000000001112222 346889999888889999999999887888899999999999
Q ss_pred CCeEEEEEeCCc----cCCCCcchhhhccCCeEEEeecchHHHhcccCcceeeecCCcchHHHHHHcCCceeecccccch
Q 012194 309 NQYFLWVVRESE----QAKLPENFSDETSQKGLVVNWCPQLEVLAHEAAGCFLTHCGWNSTMEALSLGVPMVAMPQWSDQ 384 (468)
Q Consensus 309 ~~~~i~~~~~~~----~~~~~~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~I~HgG~~s~~Eal~~GvP~l~~P~~~DQ 384 (468)
+++|||+++... ...+|+++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|+..||
T Consensus 324 ~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~dQ 403 (482)
T 2pq6_A 324 KKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFADQ 403 (482)
T ss_dssp TCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTH
T ss_pred CCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCcccch
Confidence 999999997542 1226778888889999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHH-hhhcceeEecCCCCCccCHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 012194 385 STNGKYIM-DVWKMGLKVPADEKGIVRREAIAHCISEILEGERGKEIRQNAGKWSNFAKEAVAKGGSSDKNIDDFVANLI 463 (468)
Q Consensus 385 ~~na~~l~-~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~l~ 463 (468)
+.||++++ +. |+|+.+. . .+++++|.++|+++|+|+.+++||+||+++++.+++++.+||++.+++++|++.|.
T Consensus 404 ~~na~~~~~~~-G~g~~l~-~---~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 478 (482)
T 2pq6_A 404 PTDCRFICNEW-EIGMEID-T---NVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVL 478 (482)
T ss_dssp HHHHHHHHHTS-CCEEECC-S---SCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHh-CEEEEEC-C---CCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 99999997 67 9999997 5 79999999999999999756679999999999999999999999999999999985
Q ss_pred hc
Q 012194 464 SS 465 (468)
Q Consensus 464 ~~ 465 (468)
..
T Consensus 479 ~~ 480 (482)
T 2pq6_A 479 LK 480 (482)
T ss_dssp CC
T ss_pred hc
Confidence 43
No 4
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=3.8e-61 Score=477.16 Aligned_cols=438 Identities=30% Similarity=0.476 Sum_probs=328.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCe--EEEEeCCccccccccCCCC-CCCCeEEEEcCCCCCCCCCCccccHH
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLK--VTLVTTYFISKSLHRDSSS-SSASIALEAISDGYDQGGSAQAESIE 88 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~--Vt~~~~~~~~~~~~~~~~~-~~~~i~f~~~~~~~~~~~~~~~~~~~ 88 (468)
+++||+++|+++.||++|+++||++|++|||+ |||++++.....+.+...+ ...+++|..++++++. ..+......
T Consensus 6 ~~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~~~~~~i~~~~i~~glp~-~~~~~~~~~ 84 (456)
T 2c1x_A 6 TNPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMHTMQCNIKSYDISDGVPE-GYVFAGRPQ 84 (456)
T ss_dssp -CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC-------CTTEEEEECCCCCCT-TCCCCCCTT
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccccCCCceEEEeCCCCCCC-cccccCChH
Confidence 45799999999999999999999999999765 5778886544433321001 1248999999987765 222112223
Q ss_pred HHHHHHHHhchHHHHHHHHHhcCC-CCCccEEEeCCCcchHHHHHHHcCCceEEEcccchHHHHHHHHhh--c---cCCC
Q 012194 89 AYLEKFWQIGPRSLCELVEKMNGS-VVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQSCAVDCIYYHVN--K---GLLK 162 (468)
Q Consensus 89 ~~~~~~~~~~~~~~~~~l~~l~~~-~~p~DlVI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~--~---~~~~ 162 (468)
..+..+.......++++++++.++ ..++|+||+|.++.|+..+|+++|||++.+++++++.++...+.. . +...
T Consensus 85 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (456)
T 2c1x_A 85 EDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVSG 164 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSSC
T ss_pred HHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCCcc
Confidence 333334333344455555544321 246799999999999999999999999999999877665443221 1 1110
Q ss_pred C-C-CCCCccccCCCCCCCCCCCCcccccCCCchhHHHHHHHHHhhcccccCeEEecchhhchHHHHHHHhccCC-ceee
Q 012194 163 L-P-LPDSQLLLPGMPPLEPQDMPSFVYDLGSYPAVSDMVVKYQFDNIDKADWVLCNTFYELEEEVAEWLGKLWS-LKTI 239 (468)
Q Consensus 163 ~-p-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~p-~~~v 239 (468)
. . ......++|+++.+...+++..+........+.+.+.+ ......+.+++++|++++||+...+.+++..| +++|
T Consensus 165 ~~~~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~-~~~~~~~~~~vl~ns~~~le~~~~~~~~~~~~~~~~v 243 (456)
T 2c1x_A 165 IQGREDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHR-MGQVLPKATAVFINSFEELDDSLTNDLKSKLKTYLNI 243 (456)
T ss_dssp CTTCTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHH-HHHHGGGSSCEEESSCGGGCHHHHHHHHHHSSCEEEC
T ss_pred cccccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHH-HHHhhhhCCEEEECChHHHhHHHHHHHHhcCCCEEEe
Confidence 0 0 11112247888766666665433221112233344444 44455678899999999999977666665444 9999
Q ss_pred cccCCCcccccccCCccccCCcCCCCChhhHhHhhhcCCCCceEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeCC
Q 012194 240 GPTVPSLYLDKQLEDDKDYGFSMFKPDNESCIKWLNDRAKGSVVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRES 319 (468)
Q Consensus 240 gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~ 319 (468)
||+..... ... + +.+.++.+|++.++++++|||||||....+.+++..++.++++.+++|||+++..
T Consensus 244 Gpl~~~~~-------~~~-----~-~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~ 310 (456)
T 2c1x_A 244 GPFNLITP-------PPV-----V-PNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDK 310 (456)
T ss_dssp CCHHHHC----------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGG
T ss_pred cCcccCcc-------ccc-----c-cchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhcCCeEEEEECCc
Confidence 99864310 000 0 1124588999988788999999999998788899999999999999999999876
Q ss_pred ccCCCCcchhhhccCCeEEEeecchHHHhcccCcceeeecCCcchHHHHHHcCCceeecccccchhHHHHHHHhhhccee
Q 012194 320 EQAKLPENFSDETSQKGLVVNWCPQLEVLAHEAAGCFLTHCGWNSTMEALSLGVPMVAMPQWSDQSTNGKYIMDVWKMGL 399 (468)
Q Consensus 320 ~~~~~~~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~I~HgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~l~~~~g~G~ 399 (468)
....+++++.++.++|+++++|+||.++|+|+++++||||||+||++||+++|||+|++|++.||+.||+++++.||+|+
T Consensus 311 ~~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~ 390 (456)
T 2c1x_A 311 ARVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGV 390 (456)
T ss_dssp GGGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEE
T ss_pred chhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhHHHHHHHHHHHhCeEE
Confidence 55568888888889999999999999999999988899999999999999999999999999999999999999999999
Q ss_pred EecCCCCCccCHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhcCC
Q 012194 400 KVPADEKGIVRREAIAHCISEILEGERGKEIRQNAGKWSNFAKEAVAKGGSSDKNIDDFVANLISSKS 467 (468)
Q Consensus 400 ~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~ 467 (468)
.+... .++.++|.++|+++|+|+++++||+||+++++.+++++.+|||+.+++++|++.+...|.
T Consensus 391 ~l~~~---~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~~~~ 455 (456)
T 2c1x_A 391 RIEGG---VFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSKPKD 455 (456)
T ss_dssp ECGGG---SCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTSCCC
T ss_pred EecCC---CcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHhcCC
Confidence 99865 799999999999999997667899999999999999999999999999999999976553
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=1.5e-58 Score=459.70 Aligned_cols=431 Identities=24% Similarity=0.422 Sum_probs=325.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCccc-----cccccCCCCCCCCeEEEEcCCCCCCCCCCcc
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHK--GLKVTLVTTYFIS-----KSLHRDSSSSSASIALEAISDGYDQGGSAQA 84 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~-----~~~~~~~~~~~~~i~f~~~~~~~~~~~~~~~ 84 (468)
+++||+++|+++.||++|+++||++|++| ||+|||++++.+. ..+.+.. ....+++|..+|.+..+ ..+..
T Consensus 8 ~~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~-~~~~~i~~~~lp~~~~~-~~~~~ 85 (463)
T 2acv_A 8 KNSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVL-ASQPQIQLIDLPEVEPP-PQELL 85 (463)
T ss_dssp HCEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHH-CSCTTEEEEECCCCCCC-CGGGG
T ss_pred CCCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhcc-cCCCCceEEECCCCCCC-ccccc
Confidence 35799999999999999999999999999 9999999998753 2222100 12358999999975322 11111
Q ss_pred ccHHHHHHHHHHhchHHHHHHHHHhcCCCCCccEEEeCCCcchHHHHHHHcCCceEEEcccchHHHHHHHHhhccCC--C
Q 012194 85 ESIEAYLEKFWQIGPRSLCELVEKMNGSVVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQSCAVDCIYYHVNKGLL--K 162 (468)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~~~~--~ 162 (468)
......+..........++++++++ . ..++|+||+|.++.|+..+|+++|||++.+++++++.++.+.++..... +
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~ll~~~-~-~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 163 (463)
T 2acv_A 86 KSPEFYILTFLESLIPHVKATIKTI-L-SNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEV 163 (463)
T ss_dssp GSHHHHHHHHHHHTHHHHHHHHHHH-C-CTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTTCC
T ss_pred CCccHHHHHHHHhhhHHHHHHHHhc-c-CCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhcccCC
Confidence 1211112233344556778888776 2 2467999999999999999999999999999999887766655532111 1
Q ss_pred CCCCCC---ccccCCC-CCCCCCCCCcccccCCCchhHHHHHHHHHhhcccccCeEEecchhhchHHHHHHHhc----cC
Q 012194 163 LPLPDS---QLLLPGM-PPLEPQDMPSFVYDLGSYPAVSDMVVKYQFDNIDKADWVLCNTFYELEEEVAEWLGK----LW 234 (468)
Q Consensus 163 ~p~~~~---~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~----~~ 234 (468)
+..... ...+|++ +++...+++..+... . .....+.+ ......+.+++++|+++++|+....++.+ ..
T Consensus 164 ~~~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~--~-~~~~~~~~-~~~~~~~~~~~l~nt~~ele~~~~~~l~~~~~p~~ 239 (463)
T 2acv_A 164 FDDSDRDHQLLNIPGISNQVPSNVLPDACFNK--D-GGYIAYYK-LAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIP 239 (463)
T ss_dssp CCCSSGGGCEECCTTCSSCEEGGGSCHHHHCT--T-THHHHHHH-HHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTTSC
T ss_pred CCCccccCceeECCCCCCCCChHHCchhhcCC--c-hHHHHHHH-HHHhcccCCEEEECCHHHHhHHHHHHHHhccccCC
Confidence 111112 3456777 665555555433322 1 13334444 44556677889999999999988777665 33
Q ss_pred CceeecccCCCcccccccCCccccCCcCCCCChhhHhHhhhcCCCCceEEEEecCcC-CCCHHHHHHHHHHHHhCCCeEE
Q 012194 235 SLKTIGPTVPSLYLDKQLEDDKDYGFSMFKPDNESCIKWLNDRAKGSVVYVSFGSYA-PLKVEEMEELAWGLKATNQYFL 313 (468)
Q Consensus 235 p~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~is~Gs~~-~~~~~~~~~~~~a~~~~~~~~i 313 (468)
++++|||+.+... . +.... . | +.+.++.+|++.++++++|||||||+. ..+.+++..++.+|++.+++||
T Consensus 240 ~v~~vGpl~~~~~---~-~~~~~---~-~-~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~~l~~~~~~~l 310 (463)
T 2acv_A 240 PIYAVGPLLDLKG---Q-PNPKL---D-Q-AQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFL 310 (463)
T ss_dssp CEEECCCCCCSSC---C-CBTTB---C-H-HHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred cEEEeCCCccccc---c-ccccc---c-c-ccchhHHHHHhcCCCCceEEEEeccccccCCHHHHHHHHHHHHhCCCcEE
Confidence 5999999975410 0 00000 0 0 124678899999888899999999999 7888899999999999999999
Q ss_pred EEEeCCccCCCCcchhhhc--cCCeEEEeecchHHHhcccCcceeeecCCcchHHHHHHcCCceeecccccchhHHHHHH
Q 012194 314 WVVRESEQAKLPENFSDET--SQKGLVVNWCPQLEVLAHEAAGCFLTHCGWNSTMEALSLGVPMVAMPQWSDQSTNGKYI 391 (468)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~--~~nv~~~~~vpq~~lL~~~~~~~~I~HgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~l 391 (468)
|+++.. .+.+|+++.++. ++|+++++|+||.++|+|+++++||||||+||++||+++|||||++|++.||+.||+++
T Consensus 311 ~~~~~~-~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~GvP~i~~P~~~dQ~~Na~~l 389 (463)
T 2acv_A 311 WSNSAE-KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWPIYAEQQLNAFRL 389 (463)
T ss_dssp EECCCC-GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHH
T ss_pred EEECCC-cccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCCCeeeccchhhhHHHHHHH
Confidence 999763 123677887777 89999999999999999999888999999999999999999999999999999999995
Q ss_pred -HhhhcceeEec-CCCCC--ccCHHHHHHHHHHHhc-CccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHh
Q 012194 392 -MDVWKMGLKVP-ADEKG--IVRREAIAHCISEILE-GERGKEIRQNAGKWSNFAKEAVAKGGSSDKNIDDFVANLIS 464 (468)
Q Consensus 392 -~~~~g~G~~l~-~~~~~--~~~~~~l~~~i~~ll~-~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~ 464 (468)
++. |+|+.+. ..+++ .++.++|.++|+++|+ ++ +||+||+++++.+++++.+||++.+++++|++++.+
T Consensus 390 v~~~-g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~---~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~~ 463 (463)
T 2acv_A 390 VKEW-GVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDS---IVHKKVQEMKEMSRNAVVDGGSSLISVGKLIDDITG 463 (463)
T ss_dssp HHTS-CCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTC---THHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHHHC
T ss_pred HHHc-CeEEEEecccCCCCccccHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhcC
Confidence 788 9999983 21123 5899999999999997 34 899999999999999999999999999999999853
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=8e-46 Score=366.77 Aligned_cols=388 Identities=19% Similarity=0.217 Sum_probs=258.9
Q ss_pred hhhhhcCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEEcCCCCCCCCCC--
Q 012194 5 EKKAASCRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEAISDGYDQGGSA-- 82 (468)
Q Consensus 5 ~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~~~~~~~~~~-- 82 (468)
|++..+|+.|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+++. |++|.+++..++.....
T Consensus 4 ~~~~~~m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~------g~~~~~~~~~~~~~~~~~~ 77 (424)
T 2iya_A 4 EHRSASVTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA------GATPVVYDSILPKESNPEE 77 (424)
T ss_dssp -------CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH------TCEEEECCCCSCCTTCTTC
T ss_pred ccccCCcccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC------CCEEEecCccccccccchh
Confidence 4455567788999999999999999999999999999999999999988877754 89999998765431111
Q ss_pred -ccccHHHHHHHHHHhchHHHHHHHHHhcCCCCCccEEEeCCCcchHHHHHHHcCCceEEEcccchHHHHHHHHhhccCC
Q 012194 83 -QAESIEAYLEKFWQIGPRSLCELVEKMNGSVVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQSCAVDCIYYHVNKGLL 161 (468)
Q Consensus 83 -~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~~~~ 161 (468)
...+....+..+.........++.+.+ +.. ++|+||+|.+..++..+|+++|||++.+++.++..............
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~-~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~~~~~~~~~ 155 (424)
T 2iya_A 78 SWPEDQESAMGLFLDEAVRVLPQLEDAY-ADD-RPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFEEDVPAVQD 155 (424)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHHT-TTS-CCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHHHHSGGGSC
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHHHH-hcc-CCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccccccccccc
Confidence 122333333333333333344444433 333 45999999988889999999999999998776311100000000000
Q ss_pred CCCCCCCccccCCCCCCCCCCCCcccccCCCchhHHHHHHHHHhhc----------ccccCeEEecchhhchHHHHHHHh
Q 012194 162 KLPLPDSQLLLPGMPPLEPQDMPSFVYDLGSYPAVSDMVVKYQFDN----------IDKADWVLCNTFYELEEEVAEWLG 231 (468)
Q Consensus 162 ~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~s~~~le~~~~~~~~ 231 (468)
++.+... .+ .++..................+.+.+.+ .... ....+.+++++.+++++.. .
T Consensus 156 ~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~l~~~~~~l~~~~----~ 226 (424)
T 2iya_A 156 PTADRGE---EA-AAPAGTGDAEEGAEAEDGLVRFFTRLSA-FLEEHGVDTPATEFLIAPNRCIVALPRTFQIKG----D 226 (424)
T ss_dssp CCC-------------------------HHHHHHHHHHHHH-HHHHTTCCSCHHHHHHCCSSEEESSCTTTSTTG----G
T ss_pred ccccccc---cc-ccccccccchhhhccchhHHHHHHHHHH-HHHHcCCCCCHHHhccCCCcEEEEcchhhCCCc----c
Confidence 0000000 00 0000000000000000000001111111 1111 1145678888888887622 1
Q ss_pred ccC-CceeecccCCCcccccccCCccccCCcCCCCChhhHhHhhhcCCCCceEEEEecCcCCCCHHHHHHHHHHHHhCCC
Q 012194 232 KLW-SLKTIGPTVPSLYLDKQLEDDKDYGFSMFKPDNESCIKWLNDRAKGSVVYVSFGSYAPLKVEEMEELAWGLKATNQ 310 (468)
Q Consensus 232 ~~~-p~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~ 310 (468)
... +++++||+++. .....+|++..+++++||+++||......+.+..+++++++.+.
T Consensus 227 ~~~~~~~~vGp~~~~---------------------~~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~ 285 (424)
T 2iya_A 227 TVGDNYTFVGPTYGD---------------------RSHQGTWEGPGDGRPVLLIALGSAFTDHLDFYRTCLSAVDGLDW 285 (424)
T ss_dssp GCCTTEEECCCCCCC---------------------CGGGCCCCCCCSSCCEEEEECCSSSCCCHHHHHHHHHHHTTCSS
T ss_pred CCCCCEEEeCCCCCC---------------------cccCCCCCccCCCCCEEEEEcCCCCcchHHHHHHHHHHHhcCCc
Confidence 111 38899987543 01122455544567899999999986667889999999999899
Q ss_pred eEEEEEeCCccCCCCcchhhhccCCeEEEeecchHHHhcccCcceeeecCCcchHHHHHHcCCceeecccccchhHHHHH
Q 012194 311 YFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQLEVLAHEAAGCFLTHCGWNSTMEALSLGVPMVAMPQWSDQSTNGKY 390 (468)
Q Consensus 311 ~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~I~HgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~ 390 (468)
+++|.++..... +.+ +..++|+++.+|+||.++|++|++ ||||||+||++||+++|||+|++|...||+.||++
T Consensus 286 ~~~~~~g~~~~~---~~~-~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~ 359 (424)
T 2iya_A 286 HVVLSVGRFVDP---ADL-GEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAVPMVAVPQIAEQTMNAER 359 (424)
T ss_dssp EEEEECCTTSCG---GGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHH
T ss_pred EEEEEECCcCCh---HHh-ccCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCCCEEEecCccchHHHHHH
Confidence 999988754211 111 235789999999999999999999 99999999999999999999999999999999999
Q ss_pred HHhhhcceeEecCCCCCccCHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHH
Q 012194 391 IMDVWKMGLKVPADEKGIVRREAIAHCISEILEGERGKEIRQNAGKWSNFAKE 443 (468)
Q Consensus 391 l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~ 443 (468)
+++. |+|+.+..+ ++++++|.++|.++|+|+ +++++++++++.+++
T Consensus 360 l~~~-g~g~~~~~~---~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~ 405 (424)
T 2iya_A 360 IVEL-GLGRHIPRD---QVTAEKLREAVLAVASDP---GVAERLAAVRQEIRE 405 (424)
T ss_dssp HHHT-TSEEECCGG---GCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT
T ss_pred HHHC-CCEEEcCcC---CCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh
Confidence 9999 999999866 789999999999999996 899999999999875
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=6e-45 Score=357.86 Aligned_cols=346 Identities=18% Similarity=0.169 Sum_probs=224.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEEcCCCCCCC------CC---
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEAISDGYDQG------GS--- 81 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~~~~~~~------~~--- 81 (468)
.+.|||||++.|+.||++|+++||++|++|||+|||++++.+....+ .++.+.++....... ..
T Consensus 20 ~~~MRIL~~~~p~~GHv~P~l~LA~~L~~rGh~Vt~~t~~~~~~~~~-------~g~~~~~~~~~~~~~~~~~~~~~~~~ 92 (400)
T 4amg_A 20 FQSMRALFITSPGLSHILPTVPLAQALRALGHEVRYATGGDIRAVAE-------AGLCAVDVSPGVNYAKLFVPDDTDVT 92 (400)
T ss_dssp -CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECSSTHHHHT-------TTCEEEESSTTCCSHHHHSCCC----
T ss_pred CCCCeEEEECCCchhHHHHHHHHHHHHHHCCCEEEEEeCcchhhHHh-------cCCeeEecCCchhHhhhccccccccc
Confidence 56799999999999999999999999999999999999988876554 267787775332110 00
Q ss_pred ---C-ccccHHHHHHHHHHhchHHHHHHHHHhcCCCCCccEEEeCCCcchHHHHHHHcCCceEEEcccchHHHHHHHHhh
Q 012194 82 ---A-QAESIEAYLEKFWQIGPRSLCELVEKMNGSVVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQSCAVDCIYYHVN 157 (468)
Q Consensus 82 ---~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~ 157 (468)
. ...........+.......+.++++.+.+. + ||+||+|.++.++..+|+.+|||++.+...+..........
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~-pD~Vv~d~~~~~~~~~A~~~gip~~~~~~~~~~~~~~~~~~- 169 (400)
T 4amg_A 93 DPMHSEGLGEGFFAEMFARVSAVAVDGALRTARSW-R-PDLVVHTPTQGAGPLTAAALQLPCVELPLGPADSEPGLGAL- 169 (400)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHHHHHH-C-CSEEEECTTCTHHHHHHHHTTCCEEECCSSTTTCCHHHHHH-
T ss_pred cccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhc-C-CCEEEECcchHHHHHHHHHcCCCceeecccccccccchhhH-
Confidence 0 001111122222222222333333333322 3 59999999999999999999999998755431110000000
Q ss_pred ccCCCCCCCCCccccCCCCCCCCCCCCcccccCCCchhHHHHHHHHHhhcccccC-eEEecchhhchHHHHHHHhccC--
Q 012194 158 KGLLKLPLPDSQLLLPGMPPLEPQDMPSFVYDLGSYPAVSDMVVKYQFDNIDKAD-WVLCNTFYELEEEVAEWLGKLW-- 234 (468)
Q Consensus 158 ~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~s~~~le~~~~~~~~~~~-- 234 (468)
. ...+.....+ ..-...... .......... ....+...
T Consensus 170 -----------------------------~-----~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 210 (400)
T 4amg_A 170 -----------------------------I-----RRAMSKDYER-HGVTGEPTGSVRLTTTPPSV----EALLPEDRRS 210 (400)
T ss_dssp -----------------------------H-----HHHTHHHHHH-TTCCCCCSCEEEEECCCHHH----HHTSCGGGCC
T ss_pred -----------------------------H-----HHHHHHHHHH-hCCCcccccchhhcccCchh----hccCcccccC
Confidence 0 0001111111 000001111 1111111110 00011000
Q ss_pred C-ceeecccCCCcccccccCCccccCCcCCCCChhhHhHhhhcCCCCceEEEEecCcCCCC--HHHHHHHHHHHHhCCCe
Q 012194 235 S-LKTIGPTVPSLYLDKQLEDDKDYGFSMFKPDNESCIKWLNDRAKGSVVYVSFGSYAPLK--VEEMEELAWGLKATNQY 311 (468)
Q Consensus 235 p-~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~is~Gs~~~~~--~~~~~~~~~a~~~~~~~ 311 (468)
+ .+..++... .....+.+|++..+++++||||+||+.... .+.+..+++++.+.+.+
T Consensus 211 ~~~~~~~~~~~--------------------~~~~~~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~ 270 (400)
T 4amg_A 211 PGAWPMRYVPY--------------------NGGAVLPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAE 270 (400)
T ss_dssp TTCEECCCCCC--------------------CCCEECCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSE
T ss_pred CcccCcccccc--------------------cccccCcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCce
Confidence 0 111111110 012334457777788899999999987533 46788899999999999
Q ss_pred EEEEEeCCccCCCCcchhhhccCCeEEEeecchHHHhcccCcceeeecCCcchHHHHHHcCCceeecccccchhHHHHHH
Q 012194 312 FLWVVRESEQAKLPENFSDETSQKGLVVNWCPQLEVLAHEAAGCFLTHCGWNSTMEALSLGVPMVAMPQWSDQSTNGKYI 391 (468)
Q Consensus 312 ~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~I~HgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~l 391 (468)
++|.+++...+.. ..+++|+++.+|+||.++|+|+++ ||||||+||++||+++|||+|++|+..||+.||+++
T Consensus 271 ~v~~~~~~~~~~~-----~~~~~~v~~~~~~p~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v 343 (400)
T 4amg_A 271 FVLTLGGGDLALL-----GELPANVRVVEWIPLGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVL 343 (400)
T ss_dssp EEEECCTTCCCCC-----CCCCTTEEEECCCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHH
T ss_pred EEEEecCcccccc-----ccCCCCEEEEeecCHHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHH
Confidence 9999876543322 236789999999999999999999 999999999999999999999999999999999999
Q ss_pred HhhhcceeEecCCCCCccCHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHH
Q 012194 392 MDVWKMGLKVPADEKGIVRREAIAHCISEILEGERGKEIRQNAGKWSNFAKE 443 (468)
Q Consensus 392 ~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~ 443 (468)
++. |+|+.++.. +++++ +|+++|+|+ +||++|+++++++++
T Consensus 344 ~~~-G~g~~l~~~---~~~~~----al~~lL~d~---~~r~~a~~l~~~~~~ 384 (400)
T 4amg_A 344 TGL-GIGFDAEAG---SLGAE----QCRRLLDDA---GLREAALRVRQEMSE 384 (400)
T ss_dssp HHH-TSEEECCTT---TCSHH----HHHHHHHCH---HHHHHHHHHHHHHHT
T ss_pred HHC-CCEEEcCCC---CchHH----HHHHHHcCH---HHHHHHHHHHHHHHc
Confidence 999 999999876 66665 567889997 999999999999985
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=2e-43 Score=348.30 Aligned_cols=377 Identities=12% Similarity=0.128 Sum_probs=250.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEEcCCCCCCCCCCc-cccHHHHHH
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEAISDGYDQGGSAQ-AESIEAYLE 92 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~~~~~~~~~~~-~~~~~~~~~ 92 (468)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+.+. |+.|..++..... .... .......+.
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~------g~~~~~i~~~~~~-~~~~~~~~~~~~~~ 73 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV------GVPHVPVGPSARA-PIQRAKPLTAEDVR 73 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT------TCCEEECCC--------CCSCCCHHHHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHc------CCeeeeCCCCHHH-HhhcccccchHHHH
Confidence 7999999999999999999999999999999999999887777643 8999999865322 1111 111111111
Q ss_pred HHHHhchHHHHHHHHHhcCCCCCccEEEeCC-Ccch--HHHHHHHcCCceEEEcccchHHHHHHHHhhccCCCCCCCCCc
Q 012194 93 KFWQIGPRSLCELVEKMNGSVVPVDCIVYDS-FLPW--ALDVAKKFGLVGAAFLTQSCAVDCIYYHVNKGLLKLPLPDSQ 169 (468)
Q Consensus 93 ~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~-~~~~--~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 169 (468)
.+. .....+.++++.+...++|+||+|. +..+ +..+|+++|||++.++++++... .
T Consensus 74 ~~~---~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~--------------~---- 132 (415)
T 1iir_A 74 RFT---TEAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVP--------------S---- 132 (415)
T ss_dssp HHH---HHHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSC--------------C----
T ss_pred HHH---HHHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCC--------------C----
Confidence 111 1122333333331013469999998 5677 89999999999999987662211 0
Q ss_pred cccCCCCCCCCCCCCcc-cccCCCch----h----HHHHHHHH--Hhhc---------ccccCeEEecchhhchHHHHHH
Q 012194 170 LLLPGMPPLEPQDMPSF-VYDLGSYP----A----VSDMVVKY--QFDN---------IDKADWVLCNTFYELEEEVAEW 229 (468)
Q Consensus 170 ~~~p~~~~~~~~~~~~~-~~~~~~~~----~----~~~~~~~~--~~~~---------~~~~~~~~~~s~~~le~~~~~~ 229 (468)
.+.|.. .... ..+.. ..+..... . +...+... .+.. .... ..++++.+++++.
T Consensus 133 ~~~p~~-~~~~-~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~~---- 205 (415)
T 1iir_A 133 PYYPPP-PLGE-PSTQDTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVLAPL---- 205 (415)
T ss_dssp SSSCCC-C----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTTSCC----
T ss_pred cccCCc-cCCc-cccchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhhcCC----
Confidence 001110 0000 00000 00000000 0 00001110 1100 0011 4577777776531
Q ss_pred HhccCCceeecccCCCcccccccCCccccCCcCCCCChhhHhHhhhcCCCCceEEEEecCcCCCCHHHHHHHHHHHHhCC
Q 012194 230 LGKLWSLKTIGPTVPSLYLDKQLEDDKDYGFSMFKPDNESCIKWLNDRAKGSVVYVSFGSYAPLKVEEMEELAWGLKATN 309 (468)
Q Consensus 230 ~~~~~p~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~is~Gs~~~~~~~~~~~~~~a~~~~~ 309 (468)
.+..++++++||+.... . .+.+.++.+|++.. +++|||++||.. ......+.+++++++.+
T Consensus 206 ~~~~~~~~~vG~~~~~~-------~---------~~~~~~~~~~l~~~--~~~v~v~~Gs~~-~~~~~~~~~~~al~~~~ 266 (415)
T 1iir_A 206 QPTDLDAVQTGAWILPD-------E---------RPLSPELAAFLDAG--PPPVYLGFGSLG-APADAVRVAIDAIRAHG 266 (415)
T ss_dssp CCCSSCCEECCCCCCCC-------C---------CCCCHHHHHHHHTS--SCCEEEECC----CCHHHHHHHHHHHHHTT
T ss_pred CcccCCeEeeCCCccCc-------c---------cCCCHHHHHHHhhC--CCeEEEeCCCCC-CcHHHHHHHHHHHHHCC
Confidence 01111478899876430 0 12257788999764 469999999997 56788889999999999
Q ss_pred CeEEEEEeCCccCCCCcchhhhccCCeEEEeecchHHHhcccCcceeeecCCcchHHHHHHcCCceeecccccchhHHHH
Q 012194 310 QYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQLEVLAHEAAGCFLTHCGWNSTMEALSLGVPMVAMPQWSDQSTNGK 389 (468)
Q Consensus 310 ~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~I~HgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~ 389 (468)
.+++|+++..... . ...++|+++.+|+||.++|+++++ ||||||+||++||+++|||+|++|...||+.||+
T Consensus 267 ~~~v~~~g~~~~~-~-----~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~ 338 (415)
T 1iir_A 267 RRVILSRGWADLV-L-----PDDGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQILLPQMADQPYYAG 338 (415)
T ss_dssp CCEEECTTCTTCC-C-----SSCGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHH
T ss_pred CeEEEEeCCCccc-c-----cCCCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCEEECCCCCccHHHHH
Confidence 9999998765322 1 125678999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHhhhcceeEecCCCCCccCHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhc
Q 012194 390 YIMDVWKMGLKVPADEKGIVRREAIAHCISEILEGERGKEIRQNAGKWSNFAKEAVAKGGSSDKNIDDFVANLISS 465 (468)
Q Consensus 390 ~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~ 465 (468)
++++. |+|+.+..+ +++.++|.++|.++ +|+ +++++++++++.++. ....+.+.+.++++...
T Consensus 339 ~l~~~-g~g~~~~~~---~~~~~~l~~~i~~l-~~~---~~~~~~~~~~~~~~~-----~~~~~~~~~~i~~~~~~ 401 (415)
T 1iir_A 339 RVAEL-GVGVAHDGP---IPTFDSLSAALATA-LTP---ETHARATAVAGTIRT-----DGAAVAARLLLDAVSRE 401 (415)
T ss_dssp HHHHH-TSEEECSSS---SCCHHHHHHHHHHH-TSH---HHHHHHHHHHHHSCS-----CHHHHHHHHHHHHHHTC
T ss_pred HHHHC-CCcccCCcC---CCCHHHHHHHHHHH-cCH---HHHHHHHHHHHHHhh-----cChHHHHHHHHHHHHhc
Confidence 99999 999999876 78999999999999 886 999999999888763 33345555556665543
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=6.4e-42 Score=337.78 Aligned_cols=361 Identities=13% Similarity=0.082 Sum_probs=247.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEEcCCCCCCCCCC--ccccHHHHH
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEAISDGYDQGGSA--QAESIEAYL 91 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~~~~~~~~~~--~~~~~~~~~ 91 (468)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+++. |+.|.+++..... ... ........+
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~------g~~~~~~~~~~~~-~~~~~~~~~~~~~~ 73 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV------GVPHVPVGLPQHM-MLQEGMPPPPPEEE 73 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH------TCCEEECSCCGGG-CCCTTSCCCCHHHH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc------CCeeeecCCCHHH-HHhhccccchhHHH
Confidence 7999999999999999999999999999999999999887777744 8999999864321 111 011111111
Q ss_pred HHHHHhchHHHHHHHHHhcCCCCCccEEEeCCC-cch--HHHHHHHcCCceEEEcccchHHHHHHHHhhccCCCCCCCCC
Q 012194 92 EKFWQIGPRSLCELVEKMNGSVVPVDCIVYDSF-LPW--ALDVAKKFGLVGAAFLTQSCAVDCIYYHVNKGLLKLPLPDS 168 (468)
Q Consensus 92 ~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~~-~~~--~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 168 (468)
..+.. .....+++.+.+...++|+||+|.+ ..+ +..+|+.+|||++.+++++.... .
T Consensus 74 ~~~~~---~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~--------------~--- 133 (416)
T 1rrv_A 74 QRLAA---MTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLA--------------S--- 133 (416)
T ss_dssp HHHHH---HHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSC--------------C---
T ss_pred HHHHH---HHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCC--------------C---
Confidence 21211 1123333333211134699999973 466 88999999999999877652210 0
Q ss_pred ccccC-CCC-CCCCCCCCcccccCCCchh----HHHHHHHHHhhc------------ccccCeEEecchhhchHHHHHHH
Q 012194 169 QLLLP-GMP-PLEPQDMPSFVYDLGSYPA----VSDMVVKYQFDN------------IDKADWVLCNTFYELEEEVAEWL 230 (468)
Q Consensus 169 ~~~~p-~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~------------~~~~~~~~~~s~~~le~~~~~~~ 230 (468)
.+.| ..+ +.................. +.....+ .... .... .+++++.+++++ .
T Consensus 134 -~~~p~~~~~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l~~-----~ 205 (416)
T 1rrv_A 134 -PHLPPAYDEPTTPGVTDIRVLWEERAARFADRYGPTLNR-RRAEIGLPPVEDVFGYGHGE-RPLLAADPVLAP-----L 205 (416)
T ss_dssp -SSSCCCBCSCCCTTCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHTTCCCCSCHHHHTTCS-SCEECSCTTTSC-----C
T ss_pred -cccCCCCCCCCCchHHHHHHHHHHHHHHHHHHhHHHHHH-HHHHcCCCCCCchhhhccCC-CeEEccCccccC-----C
Confidence 0011 110 0000000000000000000 0000111 1100 0112 567788777764 1
Q ss_pred hccCCceeecccCCCcccccccCCccccCCcCCCCChhhHhHhhhcCCCCceEEEEecCcCC-CCHHHHHHHHHHHHhCC
Q 012194 231 GKLWSLKTIGPTVPSLYLDKQLEDDKDYGFSMFKPDNESCIKWLNDRAKGSVVYVSFGSYAP-LKVEEMEELAWGLKATN 309 (468)
Q Consensus 231 ~~~~p~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~is~Gs~~~-~~~~~~~~~~~a~~~~~ 309 (468)
....+++++||+.... . .+.+.++.+|++.. +++|||++||... ...+.+..+++++++.+
T Consensus 206 ~~~~~~~~vG~~~~~~-------~---------~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~ 267 (416)
T 1rrv_A 206 QPDVDAVQTGAWLLSD-------E---------RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADAAKVAVEAIRAQG 267 (416)
T ss_dssp CSSCCCEECCCCCCCC-------C---------CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCeeeECCCccCc-------c---------CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHHHHHHHHHHHHCC
Confidence 1122578899886541 0 11257788999764 4699999999864 34677888999999999
Q ss_pred CeEEEEEeCCccCCCCcchhhhccCCeEEEeecchHHHhcccCcceeeecCCcchHHHHHHcCCceeecccccchhHHHH
Q 012194 310 QYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQLEVLAHEAAGCFLTHCGWNSTMEALSLGVPMVAMPQWSDQSTNGK 389 (468)
Q Consensus 310 ~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~I~HgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~ 389 (468)
.+++|+++..... . +..++|+++++|+||.++|+++++ ||||||+||++||+++|||+|++|+..||+.||+
T Consensus 268 ~~~v~~~g~~~~~-~-----~~~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~ 339 (416)
T 1rrv_A 268 RRVILSRGWTELV-L-----PDDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAG 339 (416)
T ss_dssp CCEEEECTTTTCC-C-----SCCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHH
T ss_pred CeEEEEeCCcccc-c-----cCCCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCCCEEEccCCCCcHHHHH
Confidence 9999998765322 1 235789999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHhhhcceeEecCCCCCccCHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHH
Q 012194 390 YIMDVWKMGLKVPADEKGIVRREAIAHCISEILEGERGKEIRQNAGKWSNFAKE 443 (468)
Q Consensus 390 ~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~ 443 (468)
++++. |+|+.+..+ ++++++|.++|.++ +|+ +|+++++++++.+++
T Consensus 340 ~l~~~-g~g~~~~~~---~~~~~~l~~~i~~l-~~~---~~~~~~~~~~~~~~~ 385 (416)
T 1rrv_A 340 RVAAL-GIGVAHDGP---TPTFESLSAALTTV-LAP---ETRARAEAVAGMVLT 385 (416)
T ss_dssp HHHHH-TSEEECSSS---CCCHHHHHHHHHHH-TSH---HHHHHHHHHTTTCCC
T ss_pred HHHHC-CCccCCCCC---CCCHHHHHHHHHHh-hCH---HHHHHHHHHHHHHhh
Confidence 99999 999999866 78999999999999 886 999999999888763
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=1.1e-40 Score=329.06 Aligned_cols=374 Identities=15% Similarity=0.216 Sum_probs=254.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEEcCCCCCCCCCC---ccccH
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEAISDGYDQGGSA---QAESI 87 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~~~~~~~~~~---~~~~~ 87 (468)
.+.|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+++. |+.|..++...+..... .....
T Consensus 18 ~~m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~------G~~~~~~~~~~~~~~~~~~~~~~~~ 91 (415)
T 3rsc_A 18 RHMAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAA------GATVVPYQSEIIDADAAEVFGSDDL 91 (415)
T ss_dssp -CCCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT------TCEEEECCCSTTTCCHHHHHHSSSS
T ss_pred ccCCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhc------CCEEEeccccccccccchhhccccH
Confidence 3458999999999999999999999999999999999999988888754 89999998654431100 00011
Q ss_pred HHHHHH-HHHhchHHHHHHHHHhcCCCCCccEEEeC-CCcchHHHHHHHcCCceEEEcccchHHHHHHHHhhccCCCCCC
Q 012194 88 EAYLEK-FWQIGPRSLCELVEKMNGSVVPVDCIVYD-SFLPWALDVAKKFGLVGAAFLTQSCAVDCIYYHVNKGLLKLPL 165 (468)
Q Consensus 88 ~~~~~~-~~~~~~~~~~~~l~~l~~~~~p~DlVI~D-~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~p~ 165 (468)
...+.. +.......+.++.+.+.+ .+| |+||+| ....++..+|+++|||++.+.+...... .. ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~l~~~l~~-~~P-DlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~---------~~--~~ 158 (415)
T 3rsc_A 92 GVRPHLMYLRENVSVLRATAEALDG-DVP-DLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNE---------HY--SF 158 (415)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSS-SCC-SEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCS---------SC--CH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-cCC-CEEEECchhhhHHHHHHHHhCCCEEEEEecccccC---------cc--cc
Confidence 111222 333333344455444443 345 999999 7778899999999999998875431000 00 00
Q ss_pred CCCccccCCCCCCCCCCCCcccccCCCchhHHHHHHHHHhhcc----------ccc-CeEEecchhhchHHHHHHHhccC
Q 012194 166 PDSQLLLPGMPPLEPQDMPSFVYDLGSYPAVSDMVVKYQFDNI----------DKA-DWVLCNTFYELEEEVAEWLGKLW 234 (468)
Q Consensus 166 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~-~~~~~~s~~~le~~~~~~~~~~~ 234 (468)
. ....+.. ....+.. ...+.+.+.+ ..... ... +..++...+.+++ .....
T Consensus 159 ~--~~~~~~~----~~~~p~~------~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~ 220 (415)
T 3rsc_A 159 S--QDMVTLA----GTIDPLD------LPVFRDTLRD-LLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQI-----AGDTF 220 (415)
T ss_dssp H--HHHHHHH----TCCCGGG------CHHHHHHHHH-HHHHTTCCCCHHHHHTCCCSEEEESSCTTTST-----TGGGC
T ss_pred c--ccccccc----ccCChhh------HHHHHHHHHH-HHHHcCCCCChhhhhcCCCCeEEEEcCcccCC-----CcccC
Confidence 0 0000000 0000000 0111111111 11111 111 4555555555553 22222
Q ss_pred --CceeecccCCCcccccccCCccccCCcCCCCChhhHhHhhhcCCCCceEEEEecCcCCCCHHHHHHHHHHHHhCCCeE
Q 012194 235 --SLKTIGPTVPSLYLDKQLEDDKDYGFSMFKPDNESCIKWLNDRAKGSVVYVSFGSYAPLKVEEMEELAWGLKATNQYF 312 (468)
Q Consensus 235 --p~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~ 312 (468)
++.++||..+. .....+|....+++++||+++||......+.+..+++++.+.+.++
T Consensus 221 ~~~~~~vGp~~~~---------------------~~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~al~~~~~~~ 279 (415)
T 3rsc_A 221 DDRFVFVGPCFDD---------------------RRFLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDCARAFDGQPWHV 279 (415)
T ss_dssp CTTEEECCCCCCC---------------------CGGGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHHHHHHTTSSCEE
T ss_pred CCceEEeCCCCCC---------------------cccCcCccccCCCCCEEEEECCCCCCChHHHHHHHHHHHhcCCcEE
Confidence 26788887543 1122234433456789999999998777788999999999999999
Q ss_pred EEEEeCCccCCCCcchhhhccCCeEEEeecchHHHhcccCcceeeecCCcchHHHHHHcCCceeecccccchhHHHHHHH
Q 012194 313 LWVVRESEQAKLPENFSDETSQKGLVVNWCPQLEVLAHEAAGCFLTHCGWNSTMEALSLGVPMVAMPQWSDQSTNGKYIM 392 (468)
Q Consensus 313 i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~I~HgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~l~ 392 (468)
+|.++.... ....+..++|+++.+|+|+.++|++|++ ||||||.||+.||+++|+|+|++|...||+.||.+++
T Consensus 280 v~~~g~~~~----~~~l~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~l~ 353 (415)
T 3rsc_A 280 VMTLGGQVD----PAALGDLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVVVPQSFDVQPMARRVD 353 (415)
T ss_dssp EEECTTTSC----GGGGCCCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHH
T ss_pred EEEeCCCCC----hHHhcCCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEEeCCcchHHHHHHHHH
Confidence 988865311 1111235789999999999999999999 9999999999999999999999999999999999999
Q ss_pred hhhcceeEecCCCCCccCHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHH
Q 012194 393 DVWKMGLKVPADEKGIVRREAIAHCISEILEGERGKEIRQNAGKWSNFAKEAVAKGGSSDKNIDDFV 459 (468)
Q Consensus 393 ~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~ 459 (468)
+. |+|..+... ++++++|.++|.++|+|+ +++++++++++.+.+ .++..+.++.+.
T Consensus 354 ~~-g~g~~~~~~---~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~i~ 409 (415)
T 3rsc_A 354 QL-GLGAVLPGE---KADGDTLLAAVGAVAADP---ALLARVEAMRGHVRR----AGGAARAADAVE 409 (415)
T ss_dssp HH-TCEEECCGG---GCCHHHHHHHHHHHHTCH---HHHHHHHHHHHHHHH----SCHHHHHHHHHH
T ss_pred Hc-CCEEEcccC---CCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh----cCHHHHHHHHHH
Confidence 99 999999876 889999999999999996 999999999999875 344444444433
No 11
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=6.4e-40 Score=322.16 Aligned_cols=361 Identities=18% Similarity=0.243 Sum_probs=249.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEEcCCCCCCCCC---CccccHH
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEAISDGYDQGGS---AQAESIE 88 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~~~~~~~~~---~~~~~~~ 88 (468)
..|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+++. |+.|..++...+.... ....+..
T Consensus 3 ~M~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~------G~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (402)
T 3ia7_A 3 RQRHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAA------GAEVVLYKSEFDTFHVPEVVKQEDAE 76 (402)
T ss_dssp CCCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHT------TCEEEECCCGGGTSSSSSSSCCTTHH
T ss_pred CCCEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHc------CCEEEecccccccccccccccccchH
Confidence 335999999999999999999999999999999999998888888754 8999999854332110 1122334
Q ss_pred HHHHH-HHHhchHHHHHHHHHhcCCCCCccEEEeC-CCcchHHHHHHHcCCceEEEcccchHHHHHHHHhhccCCCCCCC
Q 012194 89 AYLEK-FWQIGPRSLCELVEKMNGSVVPVDCIVYD-SFLPWALDVAKKFGLVGAAFLTQSCAVDCIYYHVNKGLLKLPLP 166 (468)
Q Consensus 89 ~~~~~-~~~~~~~~~~~~l~~l~~~~~p~DlVI~D-~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~p~~ 166 (468)
..+.. +.......+..+.+.+.+ .+ +|+||+| ....++..+|+.+|||++.+.+.......
T Consensus 77 ~~~~~~~~~~~~~~~~~l~~~l~~-~~-pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~--------------- 139 (402)
T 3ia7_A 77 TQLHLVYVRENVAILRAAEEALGD-NP-PDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEH--------------- 139 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT-CC-CSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTT---------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc-cC-CCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcc---------------
Confidence 44444 444444445555555543 34 5999999 77788999999999999988644311000
Q ss_pred CCccccCCCCCCCCCCCCcccccCCCchhHHHHHHHHHhhcc----------ccc-CeEEecchhhchHHHHHHHhccC-
Q 012194 167 DSQLLLPGMPPLEPQDMPSFVYDLGSYPAVSDMVVKYQFDNI----------DKA-DWVLCNTFYELEEEVAEWLGKLW- 234 (468)
Q Consensus 167 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~-~~~~~~s~~~le~~~~~~~~~~~- 234 (468)
....+.+........+. ....+.+.+.+ ..... ... +..++...+++++ ....+
T Consensus 140 --~~~~~~~~~~~~~~~~~------~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~ 205 (402)
T 3ia7_A 140 --YSLFKELWKSNGQRHPA------DVEAVHSVLVD-LLGKYGVDTPVKEYWDEIEGLTIVFLPKSFQP-----FAETFD 205 (402)
T ss_dssp --BCHHHHHHHHHTCCCGG------GSHHHHHHHHH-HHHTTTCCSCHHHHHTCCCSCEEESSCGGGST-----TGGGCC
T ss_pred --ccccccccccccccChh------hHHHHHHHHHH-HHHHcCCCCChhhhhcCCCCeEEEEcChHhCC-----ccccCC
Confidence 00000000000000000 00111111111 11111 111 4455555555553 22221
Q ss_pred -CceeecccCCCcccccccCCccccCCcCCCCChhhHhHhhhcCCCCceEEEEecCcCCCCHHHHHHHHHHHHhCCCeEE
Q 012194 235 -SLKTIGPTVPSLYLDKQLEDDKDYGFSMFKPDNESCIKWLNDRAKGSVVYVSFGSYAPLKVEEMEELAWGLKATNQYFL 313 (468)
Q Consensus 235 -p~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i 313 (468)
++.++||.... ......|....+++++||+++||......+.+..+++++.+.+.+++
T Consensus 206 ~~~~~vGp~~~~---------------------~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (402)
T 3ia7_A 206 ERFAFVGPTLTG---------------------RDGQPGWQPPRPDAPVLLVSLGNQFNEHPEFFRACAQAFADTPWHVV 264 (402)
T ss_dssp TTEEECCCCCCC-------------------------CCCCCSSTTCCEEEEECCSCSSCCHHHHHHHHHHHTTSSCEEE
T ss_pred CCeEEeCCCCCC---------------------cccCCCCcccCCCCCEEEEECCCCCcchHHHHHHHHHHHhcCCcEEE
Confidence 27788887543 11112233334567799999999987777889999999999999999
Q ss_pred EEEeCCccCCCCcchhhhccCCeEEEeecchHHHhcccCcceeeecCCcchHHHHHHcCCceeeccc-ccchhHHHHHHH
Q 012194 314 WVVRESEQAKLPENFSDETSQKGLVVNWCPQLEVLAHEAAGCFLTHCGWNSTMEALSLGVPMVAMPQ-WSDQSTNGKYIM 392 (468)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~I~HgG~~s~~Eal~~GvP~l~~P~-~~DQ~~na~~l~ 392 (468)
|.++.... ....+..++|+++.+|+|+.++|++|++ +|||||.||+.||+++|+|+|++|. ..||+.||.+++
T Consensus 265 ~~~g~~~~----~~~~~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~~q~~~a~~~~ 338 (402)
T 3ia7_A 265 MAIGGFLD----PAVLGPLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVPLVLVPHFATEAAPSAERVI 338 (402)
T ss_dssp EECCTTSC----GGGGCSCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCCEEECGGGCGGGHHHHHHHH
T ss_pred EEeCCcCC----hhhhCCCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCCcccHHHHHHHHH
Confidence 88875411 1112236789999999999999999999 9999999999999999999999999 999999999999
Q ss_pred hhhcceeEecCCCCCccCHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHH
Q 012194 393 DVWKMGLKVPADEKGIVRREAIAHCISEILEGERGKEIRQNAGKWSNFAKE 443 (468)
Q Consensus 393 ~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~ 443 (468)
+. |+|..+..+ ++++++|.+++.++|+|+ +++++++++++.+.+
T Consensus 339 ~~-g~g~~~~~~---~~~~~~l~~~~~~ll~~~---~~~~~~~~~~~~~~~ 382 (402)
T 3ia7_A 339 EL-GLGSVLRPD---QLEPASIREAVERLAADS---AVRERVRRMQRDILS 382 (402)
T ss_dssp HT-TSEEECCGG---GCSHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT
T ss_pred Hc-CCEEEccCC---CCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHhh
Confidence 99 999999876 889999999999999996 999999999988874
No 12
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=1.5e-40 Score=326.23 Aligned_cols=351 Identities=17% Similarity=0.186 Sum_probs=236.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEEcCCCCCCCCCCccccHHHHHHH
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEAISDGYDQGGSAQAESIEAYLEK 93 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~~~~~~~~~~~~~~~~~~~~~ 93 (468)
|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+++. |+.|.+++....................
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~------g~~~~~l~~~~~~~~~~~~~~~~~~~~~ 74 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV------GVPMVPVGRAVRAGAREPGELPPGAAEV 74 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHT------TCCEEECSSCSSGGGSCTTCCCTTCGGG
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc------CCceeecCCCHHHHhccccCCHHHHHHH
Confidence 7999999999999999999999999999999999999998888854 8999999854331000000000001111
Q ss_pred HHHhchHHHHHHHHHhcCCCCCccEEEeCCCcchH---HHHHHHcCCceEEEcccchHHHHHHHHhhccCCCCCCCCCcc
Q 012194 94 FWQIGPRSLCELVEKMNGSVVPVDCIVYDSFLPWA---LDVAKKFGLVGAAFLTQSCAVDCIYYHVNKGLLKLPLPDSQL 170 (468)
Q Consensus 94 ~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~~~~~~---~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 170 (468)
+.......+.++...+ + .+|+||+|.....+ ..+|+.+|||++.+..++....+
T Consensus 75 ~~~~~~~~~~~l~~~~-~---~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~------------------- 131 (404)
T 3h4t_A 75 VTEVVAEWFDKVPAAI-E---GCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPS------------------- 131 (404)
T ss_dssp HHHHHHHHHHHHHHHH-T---TCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGG-------------------
T ss_pred HHHHHHHHHHHHHHHh-c---CCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCC-------------------
Confidence 1111222223332222 2 25999998665443 78999999999988876632110
Q ss_pred ccCCCCCCCCCCCCcccccCCCchhHHHHHHHHHhhccc-----------ccCeEEecchhhchHHHHHHHhccC-Ccee
Q 012194 171 LLPGMPPLEPQDMPSFVYDLGSYPAVSDMVVKYQFDNID-----------KADWVLCNTFYELEEEVAEWLGKLW-SLKT 238 (468)
Q Consensus 171 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~s~~~le~~~~~~~~~~~-p~~~ 238 (468)
+.. . .............+.+...+ ....+. ..+..+.+..+.+.+ .+... .+.+
T Consensus 132 --~~~---~---~~~~~~~~~~~~~~~~~~~~-~~~~lgl~~~~~~~~~~~~~~~l~~~~~~l~p-----~~~~~~~~~~ 197 (404)
T 3h4t_A 132 --EQS---Q---AERDMYNQGADRLFGDAVNS-HRASIGLPPVEHLYDYGYTDQPWLAADPVLSP-----LRPTDLGTVQ 197 (404)
T ss_dssp --GSC---H---HHHHHHHHHHHHHHHHHHHH-HHHHTTCCCCCCHHHHHHCSSCEECSCTTTSC-----CCTTCCSCCB
T ss_pred --hhH---H---HHHHHHHHHHHHHhHHHHHH-HHHHcCCCCCcchhhccccCCeEEeeCcceeC-----CCCCCCCeEE
Confidence 000 0 00000000000001011111 000000 011122233333322 11111 1445
Q ss_pred ecccCCCcccccccCCccccCCcCCCCChhhHhHhhhcCCCCceEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeC
Q 012194 239 IGPTVPSLYLDKQLEDDKDYGFSMFKPDNESCIKWLNDRAKGSVVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRE 318 (468)
Q Consensus 239 vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~ 318 (468)
+|++... . ..+.++++.+|++. ++++|||++||+.. ..+.+..+++++.+.+.++||+++.
T Consensus 198 ~G~~~~~--------~--------~~~~~~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~ 258 (404)
T 3h4t_A 198 TGAWILP--------D--------QRPLSAELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGW 258 (404)
T ss_dssp CCCCCCC--------C--------CCCCCHHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTT
T ss_pred eCccccC--------C--------CCCCCHHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 5644322 0 12236778889874 45799999999987 6778899999999999999999876
Q ss_pred CccCCCCcchhhhccCCeEEEeecchHHHhcccCcceeeecCCcchHHHHHHcCCceeecccccchhHHHHHHHhhhcce
Q 012194 319 SEQAKLPENFSDETSQKGLVVNWCPQLEVLAHEAAGCFLTHCGWNSTMEALSLGVPMVAMPQWSDQSTNGKYIMDVWKMG 398 (468)
Q Consensus 319 ~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~I~HgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~l~~~~g~G 398 (468)
...... ..++|+++.+|+||.++|+++++ ||||||+||+.||+++|+|+|++|+..||+.||+++++. |+|
T Consensus 259 ~~~~~~------~~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~~-G~g 329 (404)
T 3h4t_A 259 AGLGRI------DEGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVADL-GVG 329 (404)
T ss_dssp TTCCCS------SCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHH-TSE
T ss_pred cccccc------cCCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHHC-CCE
Confidence 533211 14689999999999999999999 999999999999999999999999999999999999999 999
Q ss_pred eEecCCCCCccCHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH
Q 012194 399 LKVPADEKGIVRREAIAHCISEILEGERGKEIRQNAGKWSNFAK 442 (468)
Q Consensus 399 ~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~ 442 (468)
..+... ++++++|.++|.++|+ + +|+++++++++.+.
T Consensus 330 ~~l~~~---~~~~~~l~~ai~~ll~-~---~~~~~~~~~~~~~~ 366 (404)
T 3h4t_A 330 VAHDGP---TPTVESLSAALATALT-P---GIRARAAAVAGTIR 366 (404)
T ss_dssp EECSSS---SCCHHHHHHHHHHHTS-H---HHHHHHHHHHTTCC
T ss_pred eccCcC---CCCHHHHHHHHHHHhC-H---HHHHHHHHHHHHHh
Confidence 999876 8899999999999998 7 99999999988876
No 13
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=6.6e-40 Score=325.79 Aligned_cols=376 Identities=13% Similarity=0.114 Sum_probs=242.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEEcCCCCCCC-C---------
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEAISDGYDQG-G--------- 80 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~~~~~~~-~--------- 80 (468)
...|||+|++.++.||++|+++||++|+++||+|+|++++.+.+.+++. |+.|.+++...+.. .
T Consensus 18 ~~~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~------G~~~~~i~~~~~~~~~~~~~~~~~~ 91 (441)
T 2yjn_A 18 GSHMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAA------GLTAVPVGTDVDLVDFMTHAGHDII 91 (441)
T ss_dssp -CCCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTT------TCCEEECSCCCCHHHHHHHTTHHHH
T ss_pred CCccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhC------CCceeecCCccchHHHhhhhhcccc
Confidence 4468999999999999999999999999999999999999887777743 89999998643100 0
Q ss_pred -----CC-----cc-ccHH---HHHHHHHHh----c-hH-HHHHHHHHhcCCCCCccEEEeCCCcchHHHHHHHcCCceE
Q 012194 81 -----SA-----QA-ESIE---AYLEKFWQI----G-PR-SLCELVEKMNGSVVPVDCIVYDSFLPWALDVAKKFGLVGA 140 (468)
Q Consensus 81 -----~~-----~~-~~~~---~~~~~~~~~----~-~~-~~~~~l~~l~~~~~p~DlVI~D~~~~~~~~~A~~lgiP~i 140 (468)
.. .. .... .....+... . .. .+.++++.+.+. + +|+||+|..+.++..+|+.+|||++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~-pDlVv~d~~~~~~~~aA~~lgiP~v 169 (441)
T 2yjn_A 92 DYVRSLDFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKW-R-PDLVIWEPLTFAAPIAAAVTGTPHA 169 (441)
T ss_dssp HHHTTCCCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHH-C-CSEEEECTTCTHHHHHHHHHTCCEE
T ss_pred cccccccccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhc-C-CCEEEecCcchhHHHHHHHcCCCEE
Confidence 00 00 0111 111112111 1 12 445554444322 3 5999999987889999999999999
Q ss_pred EEcccchHHHHHHHHhhccCCCCCCCCCccccCCCCCCCCCCCCcccccCCCchhHHHHHHHHHhhcccc---------c
Q 012194 141 AFLTQSCAVDCIYYHVNKGLLKLPLPDSQLLLPGMPPLEPQDMPSFVYDLGSYPAVSDMVVKYQFDNIDK---------A 211 (468)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~ 211 (468)
.+...+.........+... ....|.. . ....+.+.+.+ ....+.. .
T Consensus 170 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~---~------------~~~~~~~~l~~-~~~~~g~~~~~~~~~~~ 224 (441)
T 2yjn_A 170 RLLWGPDITTRARQNFLGL---------LPDQPEE---H------------REDPLAEWLTW-TLEKYGGPAFDEEVVVG 224 (441)
T ss_dssp EECSSCCHHHHHHHHHHHH---------GGGSCTT---T------------CCCHHHHHHHH-HHHHTTCCCCCGGGTSC
T ss_pred EEecCCCcchhhhhhhhhh---------ccccccc---c------------ccchHHHHHHH-HHHHcCCCCCCccccCC
Confidence 9876553321111111000 0001100 0 00111122222 1111110 1
Q ss_pred CeEEecchhhchHHHHHHHhccCCceeecccCCCcccccccCCccccCCcCCCCChhhHhHhhhcCCCCceEEEEecCcC
Q 012194 212 DWVLCNTFYELEEEVAEWLGKLWSLKTIGPTVPSLYLDKQLEDDKDYGFSMFKPDNESCIKWLNDRAKGSVVYVSFGSYA 291 (468)
Q Consensus 212 ~~~~~~s~~~le~~~~~~~~~~~p~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~is~Gs~~ 291 (468)
+..+..+.+.+++ +...+...+++... . .+.++.+|++..+++++||+++||..
T Consensus 225 ~~~l~~~~~~~~~------~~~~~~~~~~~~~~-------------------~-~~~~~~~~l~~~~~~~~v~v~~Gs~~ 278 (441)
T 2yjn_A 225 QWTIDPAPAAIRL------DTGLKTVGMRYVDY-------------------N-GPSVVPEWLHDEPERRRVCLTLGISS 278 (441)
T ss_dssp SSEEECSCGGGSC------CCCCCEEECCCCCC-------------------C-SSCCCCGGGSSCCSSCEEEEEC----
T ss_pred CeEEEecCccccC------CCCCCCCceeeeCC-------------------C-CCcccchHhhcCCCCCEEEEECCCCc
Confidence 2223322222221 00000011111100 0 12335568876566789999999997
Q ss_pred CC---CHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEEeecchHHHhcccCcceeeecCCcchHHHH
Q 012194 292 PL---KVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQLEVLAHEAAGCFLTHCGWNSTMEA 368 (468)
Q Consensus 292 ~~---~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~I~HgG~~s~~Ea 368 (468)
.. ..+.+..+++++.+.+.++||++++...+.+. ..++|+++++|+||.++|++|++ ||||||.||+.||
T Consensus 279 ~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~V~~~G~~t~~Ea 351 (441)
T 2yjn_A 279 RENSIGQVSIEELLGAVGDVDAEIIATFDAQQLEGVA-----NIPDNVRTVGFVPMHALLPTCAA--TVHHGGPGSWHTA 351 (441)
T ss_dssp ------CCSTTTTHHHHHTSSSEEEECCCTTTTSSCS-----SCCSSEEECCSCCHHHHGGGCSE--EEECCCHHHHHHH
T ss_pred ccccChHHHHHHHHHHHHcCCCEEEEEECCcchhhhc-----cCCCCEEEecCCCHHHHHhhCCE--EEECCCHHHHHHH
Confidence 53 33567778899999999999998765333221 25789999999999999999999 9999999999999
Q ss_pred HHcCCceeecccccchhHHHHHHHhhhcceeEecCCCCCccCHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHcC
Q 012194 369 LSLGVPMVAMPQWSDQSTNGKYIMDVWKMGLKVPADEKGIVRREAIAHCISEILEGERGKEIRQNAGKWSNFAKEAVAKG 448 (468)
Q Consensus 369 l~~GvP~l~~P~~~DQ~~na~~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~ 448 (468)
+++|||+|++|+..||+.||+++++. |+|+.+..+ ++++++|.++|.++|+|+ +++++++++++.+.+ .
T Consensus 352 ~~~G~P~i~~p~~~dQ~~na~~l~~~-g~g~~~~~~---~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~----~ 420 (441)
T 2yjn_A 352 AIHGVPQVILPDGWDTGVRAQRTQEF-GAGIALPVP---ELTPDQLRESVKRVLDDP---AHRAGAARMRDDMLA----E 420 (441)
T ss_dssp HHTTCCEEECCCSHHHHHHHHHHHHH-TSEEECCTT---TCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT----S
T ss_pred HHhCCCEEEeCCcccHHHHHHHHHHc-CCEEEcccc---cCCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHc----C
Confidence 99999999999999999999999999 999999876 889999999999999996 999999999998874 2
Q ss_pred CCcHHHHHHHHHHHHh
Q 012194 449 GSSDKNIDDFVANLIS 464 (468)
Q Consensus 449 g~~~~~~~~~~~~l~~ 464 (468)
++ .+.+.+.+.++..
T Consensus 421 ~~-~~~~~~~i~~~~~ 435 (441)
T 2yjn_A 421 PS-PAEVVGICEELAA 435 (441)
T ss_dssp CC-HHHHHHHHHHHHH
T ss_pred CC-HHHHHHHHHHHHH
Confidence 33 4444455555543
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=1.7e-38 Score=310.14 Aligned_cols=358 Identities=15% Similarity=0.129 Sum_probs=245.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEEcCCCCC-C----------CCCC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEAISDGYD-Q----------GGSA 82 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~~~~~-~----------~~~~ 82 (468)
|||++++.++.||++|+++|+++|+++||+|++++++.+.+.+++. |+.|..++.... . ....
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~------g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGV------GLPAVATTDLPIRHFITTDREGRPEAIP 74 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT------TCCEEESCSSCHHHHHHBCTTSCBCCCC
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhC------CCEEEEeCCcchHHHHhhhcccCccccC
Confidence 7999999999999999999999999999999999998876666643 788988875320 0 0000
Q ss_pred ccccHHHHH-HH-HHHhchHHHHHHHHHhcCCCCCccEEEeCCCcchHHHHHHHcCCceEEEcccchHHHHHHHHhhccC
Q 012194 83 QAESIEAYL-EK-FWQIGPRSLCELVEKMNGSVVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQSCAVDCIYYHVNKGL 160 (468)
Q Consensus 83 ~~~~~~~~~-~~-~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~~~ 160 (468)
........+ .. +.......+.++.+.+.+. + ||+||+|.+..++..+|+.+|||++.+...+.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~-pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~------------- 139 (384)
T 2p6p_A 75 SDPVAQARFTGRWFARMAASSLPRMLDFSRAW-R-PDLIVGGTMSYVAPLLALHLGVPHARQTWDAV------------- 139 (384)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-C-CSEEEEETTCTHHHHHHHHHTCCEEEECCSSC-------------
T ss_pred cchHHHHHHHHHHHHhhHHHHHHHHHHHHhcc-C-CcEEEECcchhhHHHHHHhcCCCEEEeccCCc-------------
Confidence 000111111 11 1111122233333333321 3 59999998777888999999999998754320
Q ss_pred CCCCCCCCccccCCCCCCCCCCCCcccccCCCchhHHHHHHHHHhhc-----ccccCeEEecchhhchHHHHHHHhccCC
Q 012194 161 LKLPLPDSQLLLPGMPPLEPQDMPSFVYDLGSYPAVSDMVVKYQFDN-----IDKADWVLCNTFYELEEEVAEWLGKLWS 235 (468)
Q Consensus 161 ~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~s~~~le~~~~~~~~~~~p 235 (468)
.+ .. . .........+ .... ....+.+++++.+.+++. .. .+
T Consensus 140 -----------~~-------~~----~-----~~~~~~~~~~-~~~~~g~~~~~~~~~~l~~~~~~~~~~-----~~-~~ 185 (384)
T 2p6p_A 140 -----------DA-------DG----I-----HPGADAELRP-ELSELGLERLPAPDLFIDICPPSLRPA-----NA-AP 185 (384)
T ss_dssp -----------CC-------TT----T-----HHHHHHHTHH-HHHHTTCSSCCCCSEEEECSCGGGSCT-----TS-CC
T ss_pred -----------cc-------ch----h-----hHHHHHHHHH-HHHHcCCCCCCCCCeEEEECCHHHCCC-----CC-CC
Confidence 00 00 0 0011111111 1111 111456777777666531 11 11
Q ss_pred ceeecccCCCcccccccCCccccCCcCCCCChhhHhHhhhcCCCCceEEEEecCcCCC-----CHHHHHHHHHHHHhCCC
Q 012194 236 LKTIGPTVPSLYLDKQLEDDKDYGFSMFKPDNESCIKWLNDRAKGSVVYVSFGSYAPL-----KVEEMEELAWGLKATNQ 310 (468)
Q Consensus 236 ~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~is~Gs~~~~-----~~~~~~~~~~a~~~~~~ 310 (468)
...+++.... .+.++.+|++..+++++||+++||.... +.+.+..+++++.+.+.
T Consensus 186 ~~~~~~~~~~--------------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~ 245 (384)
T 2p6p_A 186 ARMMRHVATS--------------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDV 245 (384)
T ss_dssp CEECCCCCCC--------------------CCCBCCHHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTC
T ss_pred CCceEecCCC--------------------CCCCCCchhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCc
Confidence 1112211000 0123456777645667999999999864 45678889999999999
Q ss_pred eEEEEEeCCccCCCCcchhhhccCCeEEEeecchHHHhcccCcceeeecCCcchHHHHHHcCCceeecccccchhHHHHH
Q 012194 311 YFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQLEVLAHEAAGCFLTHCGWNSTMEALSLGVPMVAMPQWSDQSTNGKY 390 (468)
Q Consensus 311 ~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~I~HgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~ 390 (468)
+++|++++... +.+ +.+++|+.+ +|+||.++|+++++ ||||||+||++||+++|+|+|++|...||+.||.+
T Consensus 246 ~~~~~~g~~~~----~~l-~~~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~ 317 (384)
T 2p6p_A 246 ELIVAAPDTVA----EAL-RAEVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARR 317 (384)
T ss_dssp EEEEECCHHHH----HHH-HHHCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHH
T ss_pred EEEEEeCCCCH----Hhh-CCCCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHH
Confidence 99998864311 111 236789999 99999999999999 99999999999999999999999999999999999
Q ss_pred HHhhhcceeEecCCCCCccCHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhc
Q 012194 391 IMDVWKMGLKVPADEKGIVRREAIAHCISEILEGERGKEIRQNAGKWSNFAKEAVAKGGSSDKNIDDFVANLISS 465 (468)
Q Consensus 391 l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~ 465 (468)
+++. |+|+.+... ++++++|.++|.++|+|+ +++++++++++.+++ .++.++.++.+.+-++-.
T Consensus 318 ~~~~-g~g~~~~~~---~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~~~~~ 381 (384)
T 2p6p_A 318 VADY-GAAIALLPG---EDSTEAIADSCQELQAKD---TYARRAQDLSREISG----MPLPATVVTALEQLAHHH 381 (384)
T ss_dssp HHHH-TSEEECCTT---CCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT----SCCHHHHHHHHHHHHHHH
T ss_pred HHHC-CCeEecCcC---CCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh----CCCHHHHHHHHHHHhhhc
Confidence 9999 999998866 789999999999999996 999999999999985 345455555555555433
No 15
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=7.4e-38 Score=310.29 Aligned_cols=362 Identities=16% Similarity=0.172 Sum_probs=243.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEEcCCCCCCCCCCc----cccH
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEAISDGYDQGGSAQ----AESI 87 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~~~~~~~~~~~----~~~~ 87 (468)
..|||+|++.++.||++|+++|+++|+++||+|++++++.+.+.+.+ .|+.+.+++...+. .... ..+.
T Consensus 6 ~m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~------~g~~~~~~~~~~~~-~~~~~~~~~~~~ 78 (430)
T 2iyf_A 6 TPAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAA------TGPRPVLYHSTLPG-PDADPEAWGSTL 78 (430)
T ss_dssp --CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHT------TSCEEEECCCCSCC-TTSCGGGGCSSH
T ss_pred ccceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHh------CCCEEEEcCCcCcc-ccccccccchhh
Confidence 34799999999999999999999999999999999999888766663 38999998865432 1111 1233
Q ss_pred HHHHHHHHHhchHHHHHHHHHhcCCCCCccEEEeCCCcchHHHHHHHcCCceEEEcccchHHHHHHHHhhccCCCCCCCC
Q 012194 88 EAYLEKFWQIGPRSLCELVEKMNGSVVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQSCAVDCIYYHVNKGLLKLPLPD 167 (468)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~p~~~ 167 (468)
...+..+.......+..+.+.+.+ . ++|+||+|.+..++..+|+.+|||++.+++.+.............
T Consensus 79 ~~~~~~~~~~~~~~~~~l~~~l~~-~-~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~-------- 148 (430)
T 2iyf_A 79 LDNVEPFLNDAIQALPQLADAYAD-D-IPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKGYEEEVAEP-------- 148 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTT-S-CCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTTHHHHTHHH--------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhc-c-CCCEEEECCccHHHHHHHHHcCCCEEEEecccccccccccccccc--------
Confidence 333333322222334444444433 2 459999998777889999999999999876542000000000000
Q ss_pred CccccCCCCCCCCCCCCcccccCCCchhHHHHHHHHHhhc----------ccccCeEEecchhhchHHHHHHHhccCC-c
Q 012194 168 SQLLLPGMPPLEPQDMPSFVYDLGSYPAVSDMVVKYQFDN----------IDKADWVLCNTFYELEEEVAEWLGKLWS-L 236 (468)
Q Consensus 168 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~s~~~le~~~~~~~~~~~p-~ 236 (468)
. .. ..........+.+.+.+ .... ....+.+++++.+++++... ..+ .+ +
T Consensus 149 --~-~~------------~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~--~~~v 209 (430)
T 2iyf_A 149 --M-WR------------EPRQTERGRAYYARFEA-WLKENGITEHPDTFASHPPRSLVLIPKALQPHAD-RVD--EDVY 209 (430)
T ss_dssp --H-HH------------HHHHSHHHHHHHHHHHH-HHHHTTCCSCHHHHHHCCSSEEECSCGGGSTTGG-GSC--TTTE
T ss_pred --h-hh------------hhccchHHHHHHHHHHH-HHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCCcc-cCC--CccE
Confidence 0 00 00000000000011111 1111 11356778888877765211 111 13 7
Q ss_pred eeecccCCCcccccccCCccccCCcCCCCChhhHhHhhhcCCCCceEEEEecCcCCCCHHHHHHHHHHHHhC-CCeEEEE
Q 012194 237 KTIGPTVPSLYLDKQLEDDKDYGFSMFKPDNESCIKWLNDRAKGSVVYVSFGSYAPLKVEEMEELAWGLKAT-NQYFLWV 315 (468)
Q Consensus 237 ~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~is~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~ 315 (468)
+++||.++.. ....+|....+++++||+++||......+.+..+++++++. +.+++|.
T Consensus 210 ~~vG~~~~~~---------------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~l~~~~~~~~~~~ 268 (430)
T 2iyf_A 210 TFVGACQGDR---------------------AEEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVRAFGNLPGWHLVLQ 268 (430)
T ss_dssp EECCCCC--------------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHHHHTTCTTEEEEEE
T ss_pred EEeCCcCCCC---------------------CCCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHHHHhcCCCeEEEEE
Confidence 7888764320 00112333334667999999999855678888999999886 8888888
Q ss_pred EeCCccCCCCcchhhhccCCeEEEeecchHHHhcccCcceeeecCCcchHHHHHHcCCceeecccccchhHHHHHHHhhh
Q 012194 316 VRESEQAKLPENFSDETSQKGLVVNWCPQLEVLAHEAAGCFLTHCGWNSTMEALSLGVPMVAMPQWSDQSTNGKYIMDVW 395 (468)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~I~HgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~l~~~~ 395 (468)
++..... +.+ +.+++|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++|...||..||.++++.
T Consensus 269 ~G~~~~~---~~l-~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~p~~~~q~~~a~~~~~~- 341 (430)
T 2iyf_A 269 IGRKVTP---AEL-GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAVPQAVDQFGNADMLQGL- 341 (430)
T ss_dssp CC---CG---GGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHHT-
T ss_pred eCCCCCh---HHh-ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEECCCccchHHHHHHHHHc-
Confidence 8654211 111 235689999999999999999999 999999999999999999999999999999999999999
Q ss_pred cceeEecCCCCCccCHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHH
Q 012194 396 KMGLKVPADEKGIVRREAIAHCISEILEGERGKEIRQNAGKWSNFAKE 443 (468)
Q Consensus 396 g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~ 443 (468)
|+|..+... ++++++|.++|.++++|+ ++++++.+.++.+.+
T Consensus 342 g~g~~~~~~---~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~ 383 (430)
T 2iyf_A 342 GVARKLATE---EATADLLRETALALVDDP---EVARRLRRIQAEMAQ 383 (430)
T ss_dssp TSEEECCCC----CCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHH
T ss_pred CCEEEcCCC---CCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh
Confidence 999999876 789999999999999996 899999998888875
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=100.00 E-value=2.3e-38 Score=310.69 Aligned_cols=348 Identities=14% Similarity=0.170 Sum_probs=219.6
Q ss_pred hhcCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEEcCCCCCC---------
Q 012194 8 AASCRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEAISDGYDQ--------- 78 (468)
Q Consensus 8 ~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~~~~~~--------- 78 (468)
..+..+|||+|++.++.||++|+++|+++|.++||+|++++++.+.+.+++. |+.+..++...+.
T Consensus 10 ~~~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~------G~~~~~~~~~~~~~~~~~~~~~ 83 (398)
T 4fzr_A 10 VPRGSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGA------GLPFAPTCPSLDMPEVLSWDRE 83 (398)
T ss_dssp -----CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHT------TCCEEEEESSCCHHHHHSBCTT
T ss_pred CCCCCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhC------CCeeEecCCccchHhhhhhhcc
Confidence 3445679999999999999999999999999999999999998888877754 8888888632110
Q ss_pred C-CCCcccc----HHHHHHHHHHhchHHHHHHHHHhcCCCCCccEEEeCCCcchHHHHHHHcCCceEEEcccchHHHHHH
Q 012194 79 G-GSAQAES----IEAYLEKFWQIGPRSLCELVEKMNGSVVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQSCAVDCIY 153 (468)
Q Consensus 79 ~-~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~ 153 (468)
. ....... .......+.......+.++.+.+.+ .+ ||+|++|....++..+|+.+|+|++.+.........
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~-pDlVv~d~~~~~~~~~a~~~giP~v~~~~~~~~~~~-- 159 (398)
T 4fzr_A 84 GNRTTMPREEKPLLEHIGRGYGRLVLRMRDEALALAER-WK-PDLVLTETYSLTGPLVAATLGIPWIEQSIRLASPEL-- 159 (398)
T ss_dssp SCBCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HC-CSEEEEETTCTHHHHHHHHHTCCEEEECCSSCCCHH--
T ss_pred CcccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHh-CC-CCEEEECccccHHHHHHHhhCCCEEEeccCCCCchh--
Confidence 0 0000001 1111122222222223333333332 23 599999987788999999999999986543300000
Q ss_pred HHhhccCCCCCCCCCccccCCCCCCCCCCCCcccccCCCchhHHHHHHHHHhhc-----ccccCeEEecchhhchHHHHH
Q 012194 154 YHVNKGLLKLPLPDSQLLLPGMPPLEPQDMPSFVYDLGSYPAVSDMVVKYQFDN-----IDKADWVLCNTFYELEEEVAE 228 (468)
Q Consensus 154 ~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~s~~~le~~~~~ 228 (468)
. .....+++.. .... ....+..+......++...
T Consensus 160 --------------------------------~------~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 198 (398)
T 4fzr_A 160 --------------------------------I------KSAGVGELAP-ELAELGLTDFPDPLLSIDVCPPSMEAQP-- 198 (398)
T ss_dssp --------------------------------H------HHHHHHHTHH-HHHTTTCSSCCCCSEEEECSCGGGC-----
T ss_pred --------------------------------h------hHHHHHHHHH-HHHHcCCCCCCCCCeEEEeCChhhCCCC--
Confidence 0 0011111111 1111 1112333333333333210
Q ss_pred HHhccCCceeecccCCCcccccccCCccccCCcCCCCChhhHhHhhhcCCCCceEEEEecCcCCC--------CHHHHHH
Q 012194 229 WLGKLWSLKTIGPTVPSLYLDKQLEDDKDYGFSMFKPDNESCIKWLNDRAKGSVVYVSFGSYAPL--------KVEEMEE 300 (468)
Q Consensus 229 ~~~~~~p~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~is~Gs~~~~--------~~~~~~~ 300 (468)
.....++.++++. .....+.+|+...+++++||+++||.... ..+.+..
T Consensus 199 -~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~ 255 (398)
T 4fzr_A 199 -KPGTTKMRYVPYN----------------------GRNDQVPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQA 255 (398)
T ss_dssp --CCCEECCCCCCC----------------------CSSCCCCHHHHSCCSSCEEECC----------------CCSHHH
T ss_pred -CCCCCCeeeeCCC----------------------CCCCCCchhhhcCCCCCEEEEEccCcccccccccccchHHHHHH
Confidence 0000011111110 01233445666555678999999999743 3356888
Q ss_pred HHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEEeecchHHHhcccCcceeeecCCcchHHHHHHcCCceeeccc
Q 012194 301 LAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQLEVLAHEAAGCFLTHCGWNSTMEALSLGVPMVAMPQ 380 (468)
Q Consensus 301 ~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~I~HgG~~s~~Eal~~GvP~l~~P~ 380 (468)
+++++.+.+.+++|++++...+.+ +.+++|+++.+|+|+.++|++|++ ||||||.||+.||+++|+|+|++|.
T Consensus 256 ~~~al~~~~~~~v~~~~~~~~~~l-----~~~~~~v~~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~ 328 (398)
T 4fzr_A 256 LSQELPKLGFEVVVAVSDKLAQTL-----QPLPEGVLAAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPV 328 (398)
T ss_dssp HHHHGGGGTCEEEECCCC-------------CCTTEEEESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCC
T ss_pred HHHHHHhCCCEEEEEeCCcchhhh-----ccCCCcEEEeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCC
Confidence 999999999999998876532222 235789999999999999999999 9999999999999999999999999
Q ss_pred ccchhHHHHHHHhhhcceeEecCCCCCccCHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHH
Q 012194 381 WSDQSTNGKYIMDVWKMGLKVPADEKGIVRREAIAHCISEILEGERGKEIRQNAGKWSNFAKE 443 (468)
Q Consensus 381 ~~DQ~~na~~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~ 443 (468)
..||+.||.++++. |+|..+... ++++++|.++|.++|+|+ ++++++++.++.+.+
T Consensus 329 ~~~q~~~a~~~~~~-g~g~~~~~~---~~~~~~l~~ai~~ll~~~---~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 329 IAEVWDSARLLHAA-GAGVEVPWE---QAGVESVLAACARIRDDS---SYVGNARRLAAEMAT 384 (398)
T ss_dssp SGGGHHHHHHHHHT-TSEEECC----------CHHHHHHHHHHCT---HHHHHHHHHHHHHTT
T ss_pred chhHHHHHHHHHHc-CCEEecCcc---cCCHHHHHHHHHHHHhCH---HHHHHHHHHHHHHHc
Confidence 99999999999999 999999877 789999999999999997 999999999988874
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=100.00 E-value=4.5e-37 Score=301.40 Aligned_cols=356 Identities=15% Similarity=0.154 Sum_probs=235.7
Q ss_pred cCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEEcCCCCCC-----------
Q 012194 10 SCRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEAISDGYDQ----------- 78 (468)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~~~~~~----------- 78 (468)
..+.|||+|++.++.||++|+++|+++|.++||+|+++++ .+.+.+++. |+.+.+++...+.
T Consensus 17 ~~~~MrIl~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~-~~~~~~~~~------G~~~~~~~~~~~~~~~~~~~~~~~ 89 (398)
T 3oti_A 17 EGRHMRVLFVSSPGIGHLFPLIQLAWGFRTAGHDVLIAVA-EHADRAAAA------GLEVVDVAPDYSAVKVFEQVAKDN 89 (398)
T ss_dssp --CCCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEES-SCHHHHHTT------TCEEEESSTTCCHHHHHHHHHHHC
T ss_pred hhhcCEEEEEcCCCcchHhHHHHHHHHHHHCCCEEEEecc-chHHHHHhC------CCeeEecCCccCHHHHhhhcccCC
Confidence 3456999999999999999999999999999999999999 777777743 8999999853210
Q ss_pred ---------CCCCccccHHHHHHHHHHhchHHHHHHHHHhcCCCCCccEEEeCCCcchHHHHHHHcCCceEEEcccchHH
Q 012194 79 ---------GGSAQAESIEAYLEKFWQIGPRSLCELVEKMNGSVVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQSCAV 149 (468)
Q Consensus 79 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~ 149 (468)
............+..........+.+++++. + ||+||+|....++..+|+.+|+|++.+......
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~-pDlVv~d~~~~~~~~aA~~~giP~v~~~~~~~~- 163 (398)
T 3oti_A 90 PRFAETVATRPAIDLEEWGVQIAAVNRPLVDGTMALVDDY----R-PDLVVYEQGATVGLLAADRAGVPAVQRNQSAWR- 163 (398)
T ss_dssp HHHHHTGGGSCCCSGGGGHHHHHHHHGGGHHHHHHHHHHH----C-CSEEEEETTCHHHHHHHHHHTCCEEEECCTTCC-
T ss_pred ccccccccCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEECchhhHHHHHHHHcCCCEEEEeccCCC-
Confidence 0011111222222222222333344444443 3 599999988888999999999999976532200
Q ss_pred HHHHHHhhccCCCCCCCCCccccCCCCCCCCCCCCcccccCCCchhHHHHHHHHHhhcccccCeEEecchhhchHHHHHH
Q 012194 150 DCIYYHVNKGLLKLPLPDSQLLLPGMPPLEPQDMPSFVYDLGSYPAVSDMVVKYQFDNIDKADWVLCNTFYELEEEVAEW 229 (468)
Q Consensus 150 ~~~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~ 229 (468)
. ....... ...+...+.+ ...........+......+..
T Consensus 164 -----------------------------~-~~~~~~~-----~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~----- 202 (398)
T 3oti_A 164 -----------------------------T-RGMHRSI-----ASFLTDLMDK-HQVSLPEPVATIESFPPSLLL----- 202 (398)
T ss_dssp -----------------------------C-TTHHHHH-----HTTCHHHHHH-TTCCCCCCSEEECSSCGGGGT-----
T ss_pred -----------------------------c-cchhhHH-----HHHHHHHHHH-cCCCCCCCCeEEEeCCHHHCC-----
Confidence 0 0000000 0001112222 100011112233222222221
Q ss_pred HhccCCceeecccCCCcccccccCCccccCCcCCCCChhhHhHhhhcCCCCceEEEEecCcCCC--CHHHHHHHHHHHHh
Q 012194 230 LGKLWSLKTIGPTVPSLYLDKQLEDDKDYGFSMFKPDNESCIKWLNDRAKGSVVYVSFGSYAPL--KVEEMEELAWGLKA 307 (468)
Q Consensus 230 ~~~~~p~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~is~Gs~~~~--~~~~~~~~~~a~~~ 307 (468)
... ...+.+... +. ..+....+|+...+++++||+++||.... ..+.+..+++++.+
T Consensus 203 ~~~-~~~~~~~~~-~~-------------------~~~~~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~ 261 (398)
T 3oti_A 203 EAE-PEGWFMRWV-PY-------------------GGGAVLGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGE 261 (398)
T ss_dssp TSC-CCSBCCCCC-CC-------------------CCCEECCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHT
T ss_pred CCC-CCCCCcccc-CC-------------------CCCcCCchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHc
Confidence 000 000111100 00 00122334555455678999999999642 55678889999999
Q ss_pred CCCeEEEEEeCCccCCCCcchhhhccCCeEEEeecchHHHhcccCcceeeecCCcchHHHHHHcCCceeecccccchhHH
Q 012194 308 TNQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQLEVLAHEAAGCFLTHCGWNSTMEALSLGVPMVAMPQWSDQSTN 387 (468)
Q Consensus 308 ~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~I~HgG~~s~~Eal~~GvP~l~~P~~~DQ~~n 387 (468)
.+.+++|++++...+.+ +.+++|+++.+|+|+.++|++|++ ||||||.||+.||+++|+|+|++|+..||..|
T Consensus 262 ~~~~~v~~~g~~~~~~l-----~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~ 334 (398)
T 3oti_A 262 VDADFVLALGDLDISPL-----GTLPRNVRAVGWTPLHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQH 334 (398)
T ss_dssp SSSEEEEECTTSCCGGG-----CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCSSC
T ss_pred CCCEEEEEECCcChhhh-----ccCCCcEEEEccCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhHHH
Confidence 99999999876532211 235789999999999999999999 99999999999999999999999999999999
Q ss_pred H--HHHHhhhcceeEecCCCCCccCHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 012194 388 G--KYIMDVWKMGLKVPADEKGIVRREAIAHCISEILEGERGKEIRQNAGKWSNFAKEAVAKGGSSDKNIDDFVANLI 463 (468)
Q Consensus 388 a--~~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~l~ 463 (468)
| .++++. |+|+.++.. +++++.|. ++|+|+ ++++++++.++.+.+ ..+.+.+.+.++++.
T Consensus 335 a~~~~~~~~-g~g~~~~~~---~~~~~~l~----~ll~~~---~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~l~ 396 (398)
T 3oti_A 335 TAREAVSRR-GIGLVSTSD---KVDADLLR----RLIGDE---SLRTAAREVREEMVA-----LPTPAETVRRIVERI 396 (398)
T ss_dssp TTHHHHHHH-TSEEECCGG---GCCHHHHH----HHHHCH---HHHHHHHHHHHHHHT-----SCCHHHHHHHHHHHH
T ss_pred HHHHHHHHC-CCEEeeCCC---CCCHHHHH----HHHcCH---HHHHHHHHHHHHHHh-----CCCHHHHHHHHHHHh
Confidence 9 999999 999999876 77888886 888896 999999999999875 334455555555554
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=100.00 E-value=8.9e-36 Score=291.57 Aligned_cols=356 Identities=13% Similarity=0.117 Sum_probs=233.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEEc-CCCCCCC-C----C-----
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEAI-SDGYDQG-G----S----- 81 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~-~~~~~~~-~----~----- 81 (468)
+|||+|++.++.||++|++.|+++|.++||+|++++++.+.+.+.+. |+.+..+ ....... . .
T Consensus 1 ~MrIl~~~~~~~gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~------g~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (391)
T 3tsa_A 1 HMRVLVVPLPYPTHLMAMVPLCWALQASGHEVLIAAPPELQATAHGA------GLTTAGIRGNDRTGDTGGTTQLRFPNP 74 (391)
T ss_dssp CCEEEEECCSCHHHHHTTHHHHHHHHHTTCEEEEEECHHHHHHHHHB------TCEEEEC--------------CCSCCG
T ss_pred CcEEEEEcCCCcchhhhHHHHHHHHHHCCCEEEEecChhhHHHHHhC------CCceeeecCCccchhhhhhhccccccc
Confidence 48999999999999999999999999999999999998877777644 8888888 3211100 0 0
Q ss_pred ----CccccHHHHHHHHHHhc----hHHHHHHHHHhcCCCCCccEEEeCCCcchHHHHHHHcCCceEEEcccchHHHHHH
Q 012194 82 ----AQAESIEAYLEKFWQIG----PRSLCELVEKMNGSVVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQSCAVDCIY 153 (468)
Q Consensus 82 ----~~~~~~~~~~~~~~~~~----~~~~~~~l~~l~~~~~p~DlVI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~~~~~ 153 (468)
.........+....... ...+.++.+.+.+ .+ ||+||+|.....+..+|+.+|||++.+.......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~-PD~Vv~~~~~~~~~~aa~~~giP~v~~~~~~~~~---- 148 (391)
T 3tsa_A 75 AFGQRDTEAGRQLWEQTASNVAQSSLDQLPEYLRLAEA-WR-PSVLLVDVCALIGRVLGGLLDLPVVLHRWGVDPT---- 148 (391)
T ss_dssp GGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HC-CSEEEEETTCHHHHHHHHHTTCCEEEECCSCCCT----
T ss_pred ccccccchhHHHHHHHHHHHHhhcchhhHHHHHHHHHh-cC-CCEEEeCcchhHHHHHHHHhCCCEEEEecCCccc----
Confidence 00011111111111111 0013333333322 23 5999999877778899999999999875432000
Q ss_pred HHhhccCCCCCCCCCccccCCCCCCCCCCCCcccccCCCchhHHHHHHHHHhhccc-----ccCeEEecchhhchHHHHH
Q 012194 154 YHVNKGLLKLPLPDSQLLLPGMPPLEPQDMPSFVYDLGSYPAVSDMVVKYQFDNID-----KADWVLCNTFYELEEEVAE 228 (468)
Q Consensus 154 ~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~s~~~le~~~~~ 228 (468)
... ......+++.. ....+. ..+..+....++++.
T Consensus 149 ------------------------------~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---- 188 (391)
T 3tsa_A 149 ------------------------------AGP-----FSDRAHELLDP-VCRHHGLTGLPTPELILDPCPPSLQA---- 188 (391)
T ss_dssp ------------------------------TTH-----HHHHHHHHHHH-HHHHTTSSSSCCCSEEEECSCGGGSC----
T ss_pred ------------------------------ccc-----ccchHHHHHHH-HHHHcCCCCCCCCceEEEecChhhcC----
Confidence 000 00112222222 111111 113333333333321
Q ss_pred HHhccC--CceeecccCCCcccccccCCccccCCcCCCCChhhHhHhhhcCCCCceEEEEecCcCC--CC-HHHHHHHHH
Q 012194 229 WLGKLW--SLKTIGPTVPSLYLDKQLEDDKDYGFSMFKPDNESCIKWLNDRAKGSVVYVSFGSYAP--LK-VEEMEELAW 303 (468)
Q Consensus 229 ~~~~~~--p~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~is~Gs~~~--~~-~~~~~~~~~ 303 (468)
..... ++.++ |. ........|+...+++++||+++||... .. ...+..+++
T Consensus 189 -~~~~~~~~~~~~-p~----------------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~ 244 (391)
T 3tsa_A 189 -SDAPQGAPVQYV-PY----------------------NGSGAFPAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAA 244 (391)
T ss_dssp -TTSCCCEECCCC-CC----------------------CCCEECCGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHH
T ss_pred -CCCCccCCeeee-cC----------------------CCCcCCCchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHH
Confidence 11000 01111 00 0012233466555667899999999853 23 777888888
Q ss_pred HHHhC-CCeEEEEEeCCccCCCCcchhhhccCCeEEEeecchHHHhcccCcceeeecCCcchHHHHHHcCCceeeccccc
Q 012194 304 GLKAT-NQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQLEVLAHEAAGCFLTHCGWNSTMEALSLGVPMVAMPQWS 382 (468)
Q Consensus 304 a~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~I~HgG~~s~~Eal~~GvP~l~~P~~~ 382 (468)
+ .+. +.+++|+.++...+.+. ..++|+++.+|+|+.++|++|++ ||||||.||++||+++|+|+|++|...
T Consensus 245 ~-~~~p~~~~v~~~~~~~~~~l~-----~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~ 316 (391)
T 3tsa_A 245 A-TELPGVEAVIAVPPEHRALLT-----DLPDNARIAESVPLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYF 316 (391)
T ss_dssp H-HTSTTEEEEEECCGGGGGGCT-----TCCTTEEECCSCCGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCST
T ss_pred h-ccCCCeEEEEEECCcchhhcc-----cCCCCEEEeccCCHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCcc
Confidence 8 887 78999888765332221 35789999999999999999999 999999999999999999999999999
Q ss_pred chhHHHHHHHhhhcceeEecC--CCCCccCHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHH
Q 012194 383 DQSTNGKYIMDVWKMGLKVPA--DEKGIVRREAIAHCISEILEGERGKEIRQNAGKWSNFAKEAVAKGGSSDKNIDDFVA 460 (468)
Q Consensus 383 DQ~~na~~l~~~~g~G~~l~~--~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~ 460 (468)
||+.|+.++++. |+|..+.. + +.+++.|.+++.++|+|+ +++++++++++.+.+ .++ .+.+.+.+.
T Consensus 317 ~q~~~a~~~~~~-g~g~~~~~~~~---~~~~~~l~~ai~~ll~~~---~~~~~~~~~~~~~~~----~~~-~~~~~~~i~ 384 (391)
T 3tsa_A 317 DQFDYARNLAAA-GAGICLPDEQA---QSDHEQFTDSIATVLGDT---GFAAAAIKLSDEITA----MPH-PAALVRTLE 384 (391)
T ss_dssp THHHHHHHHHHT-TSEEECCSHHH---HTCHHHHHHHHHHHHTCT---HHHHHHHHHHHHHHT----SCC-HHHHHHHHH
T ss_pred cHHHHHHHHHHc-CCEEecCcccc---cCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHc----CCC-HHHHHHHHH
Confidence 999999999999 99999986 5 679999999999999998 999999999888874 333 344444555
Q ss_pred HHHh
Q 012194 461 NLIS 464 (468)
Q Consensus 461 ~l~~ 464 (468)
++..
T Consensus 385 ~~~~ 388 (391)
T 3tsa_A 385 NTAA 388 (391)
T ss_dssp HC--
T ss_pred HHHh
Confidence 5443
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=100.00 E-value=1.3e-33 Score=278.28 Aligned_cols=361 Identities=17% Similarity=0.148 Sum_probs=240.5
Q ss_pred hcCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEEcCCCCC-----------
Q 012194 9 ASCRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEAISDGYD----------- 77 (468)
Q Consensus 9 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~~~~~----------- 77 (468)
+...+|||+|++.++.||++|+++|+++|.++||+|++++++.+.+.+.+. |+.+..++....
T Consensus 16 ~~~~~MrIl~~~~~~~Gh~~~~~~la~~L~~~GheV~v~~~~~~~~~~~~~------g~~~~~~~~~~~~~~~~~~~~~~ 89 (412)
T 3otg_A 16 IEGRHMRVLFASLGTHGHTYPLLPLATAARAAGHEVTFATGEGFAGTLRKL------GFEPVATGMPVFDGFLAALRIRF 89 (412)
T ss_dssp --CCSCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT------TCEEEECCCCHHHHHHHHHHHHH
T ss_pred cccceeEEEEEcCCCcccHHHHHHHHHHHHHCCCEEEEEccHHHHHHHHhc------CCceeecCcccccchhhhhhhhh
Confidence 345679999999999999999999999999999999999998776666643 899998884100
Q ss_pred -CCCC---C---ccccHHHHHHHH-HHhchHHHHHHHHHhcCCCCCccEEEeCCCcchHHHHHHHcCCceEEEcccchHH
Q 012194 78 -QGGS---A---QAESIEAYLEKF-WQIGPRSLCELVEKMNGSVVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQSCAV 149 (468)
Q Consensus 78 -~~~~---~---~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~~~p~DlVI~D~~~~~~~~~A~~lgiP~i~~~~~~~~~ 149 (468)
.... . ........+..+ .......+.+++++. + ||+||+|....++..+|+.+|+|++.+......
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~-pDvVv~~~~~~~~~~aa~~~giP~v~~~~~~~~- 163 (412)
T 3otg_A 90 DTDSPEGLTPEQLSELPQIVFGRVIPQRVFDELQPVIERL----R-PDLVVQEISNYGAGLAALKAGIPTICHGVGRDT- 163 (412)
T ss_dssp SCSCCTTCCHHHHTTSHHHHHHTHHHHHHHHHHHHHHHHH----C-CSEEEEETTCHHHHHHHHHHTCCEEEECCSCCC-
T ss_pred cccCCccCChhHhhHHHHHHHhccchHHHHHHHHHHHHhc----C-CCEEEECchhhHHHHHHHHcCCCEEEecccccC-
Confidence 0000 0 011111111111 111122334444443 3 599999987777889999999999986543200
Q ss_pred HHHHHHhhccCCCCCCCCCccccCCCCCCCCCCCCcccccCCCchhHHHHHHHHHhhc----------ccccCeEEecch
Q 012194 150 DCIYYHVNKGLLKLPLPDSQLLLPGMPPLEPQDMPSFVYDLGSYPAVSDMVVKYQFDN----------IDKADWVLCNTF 219 (468)
Q Consensus 150 ~~~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~s~ 219 (468)
.+ .. ...+.+++.+ .... ....+.++..+.
T Consensus 164 ----------------------~~-----------~~------~~~~~~~~~~-~~~~~g~~~~~~~~~~~~d~~i~~~~ 203 (412)
T 3otg_A 164 ----------------------PD-----------DL------TRSIEEEVRG-LAQRLGLDLPPGRIDGFGNPFIDIFP 203 (412)
T ss_dssp ----------------------CS-----------HH------HHHHHHHHHH-HHHHTTCCCCSSCCGGGGCCEEECSC
T ss_pred ----------------------ch-----------hh------hHHHHHHHHH-HHHHcCCCCCcccccCCCCeEEeeCC
Confidence 00 00 0111111221 1111 122344555554
Q ss_pred hhchHHHHHHHhccCCceeecccCCCcccccccCCccccCCcCCCCChhhHhHh-hhcCCCCceEEEEecCcCCCCHHHH
Q 012194 220 YELEEEVAEWLGKLWSLKTIGPTVPSLYLDKQLEDDKDYGFSMFKPDNESCIKW-LNDRAKGSVVYVSFGSYAPLKVEEM 298 (468)
Q Consensus 220 ~~le~~~~~~~~~~~p~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~~~~I~is~Gs~~~~~~~~~ 298 (468)
..++...........|+.++++. ......+| ....+++++|++++||......+.+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~vlv~~G~~~~~~~~~~ 260 (412)
T 3otg_A 204 PSLQEPEFRARPRRHELRPVPFA-----------------------EQGDLPAWLSSRDTARPLVYLTLGTSSGGTVEVL 260 (412)
T ss_dssp GGGSCHHHHTCTTEEECCCCCCC-----------------------CCCCCCGGGGGSCTTSCEEEEECTTTTCSCHHHH
T ss_pred HHhcCCcccCCCCcceeeccCCC-----------------------CCCCCCCccccccCCCCEEEEEcCCCCcCcHHHH
Confidence 44443111000000011111110 01122334 2223466799999999976667889
Q ss_pred HHHHHHHHhCCCeEEEEEeCCc-cCCCCcchhhhccCCeEEEeecchHHHhcccCcceeeecCCcchHHHHHHcCCceee
Q 012194 299 EELAWGLKATNQYFLWVVRESE-QAKLPENFSDETSQKGLVVNWCPQLEVLAHEAAGCFLTHCGWNSTMEALSLGVPMVA 377 (468)
Q Consensus 299 ~~~~~a~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~I~HgG~~s~~Eal~~GvP~l~ 377 (468)
..+++++.+.+.+++|++++.. .+.+ +.+++|+.+.+|+|+.++|+++++ ||+|||.||++||+++|+|+|+
T Consensus 261 ~~~~~~l~~~~~~~~~~~g~~~~~~~l-----~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~ 333 (412)
T 3otg_A 261 RAAIDGLAGLDADVLVASGPSLDVSGL-----GEVPANVRLESWVPQAALLPHVDL--VVHHGGSGTTLGALGAGVPQLS 333 (412)
T ss_dssp HHHHHHHHTSSSEEEEECCSSCCCTTC-----CCCCTTEEEESCCCHHHHGGGCSE--EEESCCHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHcCCCEEEEEECCCCChhhh-----ccCCCcEEEeCCCCHHHHHhcCcE--EEECCchHHHHHHHHhCCCEEe
Confidence 9999999999999999887653 1112 125789999999999999999999 9999999999999999999999
Q ss_pred cccccchhHHHHHHHhhhcceeEecCCCCCccCHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH
Q 012194 378 MPQWSDQSTNGKYIMDVWKMGLKVPADEKGIVRREAIAHCISEILEGERGKEIRQNAGKWSNFAKEAVAKGGSSDKNIDD 457 (468)
Q Consensus 378 ~P~~~DQ~~na~~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~ 457 (468)
+|...||..|+.++++. |+|..+... ++++++|.+++.++|+|+ ++++++.+.++.+.+ ..+ .+.+.+
T Consensus 334 ~p~~~~q~~~~~~v~~~-g~g~~~~~~---~~~~~~l~~ai~~ll~~~---~~~~~~~~~~~~~~~----~~~-~~~~~~ 401 (412)
T 3otg_A 334 FPWAGDSFANAQAVAQA-GAGDHLLPD---NISPDSVSGAAKRLLAEE---SYRAGARAVAAEIAA----MPG-PDEVVR 401 (412)
T ss_dssp CCCSTTHHHHHHHHHHH-TSEEECCGG---GCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHH----SCC-HHHHHT
T ss_pred cCCchhHHHHHHHHHHc-CCEEecCcc---cCCHHHHHHHHHHHHhCH---HHHHHHHHHHHHHhc----CCC-HHHHHH
Confidence 99999999999999999 999999876 789999999999999997 899999888888875 243 344444
Q ss_pred HHHHHH
Q 012194 458 FVANLI 463 (468)
Q Consensus 458 ~~~~l~ 463 (468)
.+.++.
T Consensus 402 ~~~~l~ 407 (412)
T 3otg_A 402 LLPGFA 407 (412)
T ss_dssp THHHHH
T ss_pred HHHHHh
Confidence 444443
No 20
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.97 E-value=3.9e-30 Score=248.14 Aligned_cols=309 Identities=15% Similarity=0.110 Sum_probs=194.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccc--cccccCCCCCCCCeEEEEcCCC-CCCCCCCccccHHHH
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFIS--KSLHRDSSSSSASIALEAISDG-YDQGGSAQAESIEAY 90 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~--~~~~~~~~~~~~~i~f~~~~~~-~~~~~~~~~~~~~~~ 90 (468)
.||++...|+.||++|.++||++|.++||+|+|+++.... +.+++. |+.|+.++.. +.. ......+...
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~~g~e~~~v~~~------g~~~~~i~~~~~~~--~~~~~~~~~~ 74 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTPRGIENDLVPKA------GLPLHLIQVSGLRG--KGLKSLVKAP 74 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECSSSTHHHHTGGG------TCCEEECC----------------CH
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECCchHhhchhhhc------CCcEEEEECCCcCC--CCHHHHHHHH
Confidence 5899999888899999999999999999999999987653 334433 7888888732 211 1111111111
Q ss_pred HHHHHHhchHHHHHHHHHhcCCCCCccEEEeCCCcc--hHHHHHHHcCCceEEEcccchHHHHHHHHhhccCCCCCCCCC
Q 012194 91 LEKFWQIGPRSLCELVEKMNGSVVPVDCIVYDSFLP--WALDVAKKFGLVGAAFLTQSCAVDCIYYHVNKGLLKLPLPDS 168 (468)
Q Consensus 91 ~~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~~~~--~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 168 (468)
++.+... .....++++. + ||+||.+..+. .+..+|+.+|+|+++.....
T Consensus 75 ~~~~~~~--~~~~~~l~~~----~-PDvVi~~g~~~s~p~~laA~~~~iP~vihe~n~---------------------- 125 (365)
T 3s2u_A 75 LELLKSL--FQALRVIRQL----R-PVCVLGLGGYVTGPGGLAARLNGVPLVIHEQNA---------------------- 125 (365)
T ss_dssp HHHHHHH--HHHHHHHHHH----C-CSEEEECSSSTHHHHHHHHHHTTCCEEEEECSS----------------------
T ss_pred HHHHHHH--HHHHHHHHhc----C-CCEEEEcCCcchHHHHHHHHHcCCCEEEEecch----------------------
Confidence 1211111 1234455554 3 59999997653 35678999999999743211
Q ss_pred ccccCCCCCCCCCCCCcccccCCCchhHHHHHHHHHhhcccccCeEEecchhhchHHHHHHHhccCCceeecccCCCccc
Q 012194 169 QLLLPGMPPLEPQDMPSFVYDLGSYPAVSDMVVKYQFDNIDKADWVLCNTFYELEEEVAEWLGKLWSLKTIGPTVPSLYL 248 (468)
Q Consensus 169 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~p~~~vgp~~~~~~~ 248 (468)
+||+ ..+++.+ ..+. +..++++.. +.......+|+.+.....
T Consensus 126 ---~~G~--------------------~nr~l~~-------~a~~-v~~~~~~~~-------~~~~k~~~~g~pvr~~~~ 167 (365)
T 3s2u_A 126 ---VAGT--------------------ANRSLAP-------IARR-VCEAFPDTF-------PASDKRLTTGNPVRGELF 167 (365)
T ss_dssp ---SCCH--------------------HHHHHGG-------GCSE-EEESSTTSS-------CC---CEECCCCCCGGGC
T ss_pred ---hhhh--------------------HHHhhcc-------ccce-eeecccccc-------cCcCcEEEECCCCchhhc
Confidence 2221 0111111 1222 222332211 111124556654433111
Q ss_pred ccccCCccccCCcCCCCChhhHhHhhhcCCCCceEEEEecCcCCCCHHHHHHHHHHHHhC----CCeEEEEEeCCccCCC
Q 012194 249 DKQLEDDKDYGFSMFKPDNESCIKWLNDRAKGSVVYVSFGSYAPLKVEEMEELAWGLKAT----NQYFLWVVRESEQAKL 324 (468)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~is~Gs~~~~~~~~~~~~~~a~~~~----~~~~i~~~~~~~~~~~ 324 (468)
.. . .......+.++.|++..||.... ...+.+.+++..+ +..+++.++....+..
T Consensus 168 ~~-----------------~--~~~~~~~~~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi~~~G~~~~~~~ 226 (365)
T 3s2u_A 168 LD-----------------A--HARAPLTGRRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIRHQAGRQHAEIT 226 (365)
T ss_dssp CC-----------------T--TSSCCCTTSCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEEEECCTTTHHHH
T ss_pred cc-----------------h--hhhcccCCCCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEEEecCccccccc
Confidence 00 0 00011123556899999998642 3334455666544 4467777765432211
Q ss_pred CcchhhhccCCeEEEeecchH-HHhcccCcceeeecCCcchHHHHHHcCCceeecccc----cchhHHHHHHHhhhccee
Q 012194 325 PENFSDETSQKGLVVNWCPQL-EVLAHEAAGCFLTHCGWNSTMEALSLGVPMVAMPQW----SDQSTNGKYIMDVWKMGL 399 (468)
Q Consensus 325 ~~~~~~~~~~nv~~~~~vpq~-~lL~~~~~~~~I~HgG~~s~~Eal~~GvP~l~~P~~----~DQ~~na~~l~~~~g~G~ 399 (468)
.+ ..+..+.|+.+.+|+++. ++|+.+|+ +|||+|.+|+.|++++|+|+|.+|+. .+|..||+.+++. |+|.
T Consensus 227 ~~-~~~~~~~~~~v~~f~~dm~~~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~~-G~a~ 302 (365)
T 3s2u_A 227 AE-RYRTVAVEADVAPFISDMAAAYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVRS-GAGR 302 (365)
T ss_dssp HH-HHHHTTCCCEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHTT-TSEE
T ss_pred cc-eecccccccccccchhhhhhhhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHHC-CCEE
Confidence 11 122456789999999986 89999999 99999999999999999999999974 5899999999999 9999
Q ss_pred EecCCCCCccCHHHHHHHHHHHhcCc
Q 012194 400 KVPADEKGIVRREAIAHCISEILEGE 425 (468)
Q Consensus 400 ~l~~~~~~~~~~~~l~~~i~~ll~~~ 425 (468)
.+..+ +++++.|.++|.++|+|+
T Consensus 303 ~l~~~---~~~~~~L~~~i~~ll~d~ 325 (365)
T 3s2u_A 303 LLPQK---STGAAELAAQLSEVLMHP 325 (365)
T ss_dssp ECCTT---TCCHHHHHHHHHHHHHCT
T ss_pred EeecC---CCCHHHHHHHHHHHHCCH
Confidence 99877 899999999999999997
No 21
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.95 E-value=8.6e-28 Score=206.22 Aligned_cols=160 Identities=22% Similarity=0.361 Sum_probs=138.9
Q ss_pred ChhhHhHhhhcCCCCceEEEEecCcC-CCCHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEEeecch
Q 012194 266 DNESCIKWLNDRAKGSVVYVSFGSYA-PLKVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQ 344 (468)
Q Consensus 266 ~~~~~~~~l~~~~~~~~I~is~Gs~~-~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq 344 (468)
.+.++.+|++..+++++||+++||.. ......+..+++++++.+.+++|++++.... .+++|+++.+|+||
T Consensus 7 l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~--------~~~~~v~~~~~~~~ 78 (170)
T 2o6l_A 7 LPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKPD--------TLGLNTRLYKWIPQ 78 (170)
T ss_dssp CCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCCT--------TCCTTEEEESSCCH
T ss_pred CCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCcc--------cCCCcEEEecCCCH
Confidence 47889999987667789999999997 4567888999999999899999998764221 24678999999999
Q ss_pred HHHh--cccCcceeeecCCcchHHHHHHcCCceeecccccchhHHHHHHHhhhcceeEecCCCCCccCHHHHHHHHHHHh
Q 012194 345 LEVL--AHEAAGCFLTHCGWNSTMEALSLGVPMVAMPQWSDQSTNGKYIMDVWKMGLKVPADEKGIVRREAIAHCISEIL 422 (468)
Q Consensus 345 ~~lL--~~~~~~~~I~HgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll 422 (468)
.++| +.+++ ||||||.||+.||+++|+|+|++|...||..||.++++. |+|+.+... +++.++|.++|.+++
T Consensus 79 ~~~l~~~~ad~--~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~~-g~g~~~~~~---~~~~~~l~~~i~~ll 152 (170)
T 2o6l_A 79 NDLLGHPKTRA--FITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKAR-GAAVRVDFN---TMSSTDLLNALKRVI 152 (170)
T ss_dssp HHHHTSTTEEE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHTT-TSEEECCTT---TCCHHHHHHHHHHHH
T ss_pred HHHhcCCCcCE--EEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHHc-CCeEEeccc---cCCHHHHHHHHHHHH
Confidence 9999 55666 999999999999999999999999999999999999999 999999876 889999999999999
Q ss_pred cCccHHHHHHHHHHHHHHHH
Q 012194 423 EGERGKEIRQNAGKWSNFAK 442 (468)
Q Consensus 423 ~~~~~~~~~~~a~~~~~~~~ 442 (468)
+|+ +|+++++++++.++
T Consensus 153 ~~~---~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 153 NDP---SYKENVMKLSRIQH 169 (170)
T ss_dssp HCH---HHHHHHHHHC----
T ss_pred cCH---HHHHHHHHHHHHhh
Confidence 996 89999999998876
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.87 E-value=2.4e-20 Score=180.13 Aligned_cols=305 Identities=14% Similarity=0.059 Sum_probs=186.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccc--cccccCCCCCCCCeEEEEcCCCCCCCCCCccccHHHHH
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFIS--KSLHRDSSSSSASIALEAISDGYDQGGSAQAESIEAYL 91 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~--~~~~~~~~~~~~~i~f~~~~~~~~~~~~~~~~~~~~~~ 91 (468)
|||++++.+..||..+++.|+++|.++||+|++++..... ..+.+ .|+.+..++..... . . .....+
T Consensus 7 mkIl~~~~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~------~g~~~~~~~~~~~~-~---~-~~~~~~ 75 (364)
T 1f0k_A 7 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADRMEADLVPK------HGIEIDFIRISGLR-G---K-GIKALI 75 (364)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECTTSTHHHHGGG------GTCEEEECCCCCCT-T---C-CHHHHH
T ss_pred cEEEEEeCCCccchhHHHHHHHHHHHcCCEEEEEecCCcchhhhccc------cCCceEEecCCccC-c---C-ccHHHH
Confidence 8999999887799999999999999999999999976542 22332 27888877632111 0 0 111111
Q ss_pred HHHHH--hchHHHHHHHHHhcCCCCCccEEEeCCCc--chHHHHHHHcCCceEEEcccchHHHHHHHHhhccCCCCCCCC
Q 012194 92 EKFWQ--IGPRSLCELVEKMNGSVVPVDCIVYDSFL--PWALDVAKKFGLVGAAFLTQSCAVDCIYYHVNKGLLKLPLPD 167 (468)
Q Consensus 92 ~~~~~--~~~~~~~~~l~~l~~~~~p~DlVI~D~~~--~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~p~~~ 167 (468)
..... .....+..++++. ++|+|+++... ..+..++..+|+|++......
T Consensus 76 ~~~~~~~~~~~~l~~~l~~~-----~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~--------------------- 129 (364)
T 1f0k_A 76 AAPLRIFNAWRQARAIMKAY-----KPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNG--------------------- 129 (364)
T ss_dssp TCHHHHHHHHHHHHHHHHHH-----CCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSS---------------------
T ss_pred HHHHHHHHHHHHHHHHHHhc-----CCCEEEEeCCcCchHHHHHHHHcCCCEEEEecCC---------------------
Confidence 10000 0111233333332 25999998643 346678889999998642211
Q ss_pred CccccCCCCCCCCCCCCcccccCCCchhHHHHHHHHHhhcccccCeEEecchhhchHHHHHHHhccCCceeecccCCCcc
Q 012194 168 SQLLLPGMPPLEPQDMPSFVYDLGSYPAVSDMVVKYQFDNIDKADWVLCNTFYELEEEVAEWLGKLWSLKTIGPTVPSLY 247 (468)
Q Consensus 168 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~p~~~vgp~~~~~~ 247 (468)
.++ .. .+ . .....+.+++.+... ++ ++..+|..+....
T Consensus 130 ----~~~--------------------~~----~~-~--~~~~~d~v~~~~~~~--------~~---~~~~i~n~v~~~~ 167 (364)
T 1f0k_A 130 ----IAG--------------------LT----NK-W--LAKIATKVMQAFPGA--------FP---NAEVVGNPVRTDV 167 (364)
T ss_dssp ----SCC--------------------HH----HH-H--HTTTCSEEEESSTTS--------SS---SCEECCCCCCHHH
T ss_pred ----CCc--------------------HH----HH-H--HHHhCCEEEecChhh--------cC---CceEeCCccchhh
Confidence 000 00 11 1 112344444443211 11 2444443221100
Q ss_pred cccccCCccccCCcCCCCChhhHhHhhhcCCCCceEEEEecCcCCCCHHHHHHHHHHHHhC--CCeEEEEEeCCccCCCC
Q 012194 248 LDKQLEDDKDYGFSMFKPDNESCIKWLNDRAKGSVVYVSFGSYAPLKVEEMEELAWGLKAT--NQYFLWVVRESEQAKLP 325 (468)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~is~Gs~~~~~~~~~~~~~~a~~~~--~~~~i~~~~~~~~~~~~ 325 (468)
+.+ .. ..+.+...+++++|++..|+... ......+++++..+ +.++++.+|....+.+.
T Consensus 168 ---------------~~~-~~-~~~~~~~~~~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~~~~l~ 228 (364)
T 1f0k_A 168 ---------------LAL-PL-PQQRLAGREGPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGSQQSVE 228 (364)
T ss_dssp ---------------HTS-CC-HHHHHTTCCSSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTCHHHHH
T ss_pred ---------------ccc-ch-hhhhcccCCCCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCchHHHHH
Confidence 000 00 11122222345578888888753 34445555666544 45666666654321111
Q ss_pred cchhhhcc-CCeEEEeecch-HHHhcccCcceeeecCCcchHHHHHHcCCceeecccc---cchhHHHHHHHhhhcceeE
Q 012194 326 ENFSDETS-QKGLVVNWCPQ-LEVLAHEAAGCFLTHCGWNSTMEALSLGVPMVAMPQW---SDQSTNGKYIMDVWKMGLK 400 (468)
Q Consensus 326 ~~~~~~~~-~nv~~~~~vpq-~~lL~~~~~~~~I~HgG~~s~~Eal~~GvP~l~~P~~---~DQ~~na~~l~~~~g~G~~ 400 (468)
...+..+ +||.+.+|+++ ..+|+.+++ +|+++|.+++.||+++|+|+|+.|.. .||..|+..+.+. |.|..
T Consensus 229 -~~~~~~~~~~v~~~g~~~~~~~~~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~~-g~g~~ 304 (364)
T 1f0k_A 229 -QAYAEAGQPQHKVTEFIDDMAAAYAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEKA-GAAKI 304 (364)
T ss_dssp -HHHHHTTCTTSEEESCCSCHHHHHHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHHT-TSEEE
T ss_pred -HHHhhcCCCceEEecchhhHHHHHHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHhC-CcEEE
Confidence 1111222 58999999965 599999999 99999999999999999999999987 7999999999999 99998
Q ss_pred ecCCCCCccCHHHHHHHHHHHhcCc
Q 012194 401 VPADEKGIVRREAIAHCISEILEGE 425 (468)
Q Consensus 401 l~~~~~~~~~~~~l~~~i~~ll~~~ 425 (468)
++.. ++++++|.++|.++ |+
T Consensus 305 ~~~~---d~~~~~la~~i~~l--~~ 324 (364)
T 1f0k_A 305 IEQP---QLSVDAVANTLAGW--SR 324 (364)
T ss_dssp CCGG---GCCHHHHHHHHHTC--CH
T ss_pred eccc---cCCHHHHHHHHHhc--CH
Confidence 8865 56799999999998 64
No 23
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=99.68 E-value=1.4e-15 Score=139.08 Aligned_cols=116 Identities=10% Similarity=0.055 Sum_probs=89.7
Q ss_pred CCceEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhh--ccCCeEEEeecchH-HHhcccCcce
Q 012194 279 KGSVVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDE--TSQKGLVVNWCPQL-EVLAHEAAGC 355 (468)
Q Consensus 279 ~~~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~nv~~~~~vpq~-~lL~~~~~~~ 355 (468)
+.+.|+|++|..... ....++++++.+.. ++.++++.... ..+.+.+. -..|+.+..|+++. ++|+.+|+
T Consensus 156 ~~~~ILv~~GG~d~~--~l~~~vl~~L~~~~-~i~vv~G~~~~--~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aDl-- 228 (282)
T 3hbm_A 156 KKYDFFICMGGTDIK--NLSLQIASELPKTK-IISIATSSSNP--NLKKLQKFAKLHNNIRLFIDHENIAKLMNESNK-- 228 (282)
T ss_dssp CCEEEEEECCSCCTT--CHHHHHHHHSCTTS-CEEEEECTTCT--THHHHHHHHHTCSSEEEEESCSCHHHHHHTEEE--
T ss_pred cCCeEEEEECCCchh--hHHHHHHHHhhcCC-CEEEEECCCch--HHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCCE--
Confidence 356899999976432 35566777776654 56666655422 11222111 12489999999987 89999999
Q ss_pred eeecCCcchHHHHHHcCCceeecccccchhHHHHHHHhhhcceeEecC
Q 012194 356 FLTHCGWNSTMEALSLGVPMVAMPQWSDQSTNGKYIMDVWKMGLKVPA 403 (468)
Q Consensus 356 ~I~HgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~l~~~~g~G~~l~~ 403 (468)
+||+|| +|+.|+++.|+|+|++|...+|..||+.+++. |++..+..
T Consensus 229 vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~~-G~~~~~~~ 274 (282)
T 3hbm_A 229 LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAKK-GYEVEYKY 274 (282)
T ss_dssp EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHHT-TCEEECGG
T ss_pred EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHC-CCEEEcch
Confidence 999999 89999999999999999999999999999999 99988874
No 24
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.66 E-value=2.6e-16 Score=138.02 Aligned_cols=131 Identities=11% Similarity=0.177 Sum_probs=97.1
Q ss_pred CCCceEEEEecCcCCCCHHHHHHH-----HHHHHhCC-CeEEEEEeCCccCCCCcchhhh--------------------
Q 012194 278 AKGSVVYVSFGSYAPLKVEEMEEL-----AWGLKATN-QYFLWVVRESEQAKLPENFSDE-------------------- 331 (468)
Q Consensus 278 ~~~~~I~is~Gs~~~~~~~~~~~~-----~~a~~~~~-~~~i~~~~~~~~~~~~~~~~~~-------------------- 331 (468)
+++++|||+.||.... .+.+..+ ++++.+.+ .++++++|....+.. ....+.
T Consensus 26 ~~~~~VlVtgGS~~~~-n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~-~~~~~~~~~~~~~~l~p~~~~~~~~~ 103 (224)
T 2jzc_A 26 IEEKALFVTCGATVPF-PKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEF-EHLVQERGGQRESQKIPIDQFGCGDT 103 (224)
T ss_dssp CCSCCEEEECCSCCSC-HHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCC-CSHHHHHTCEECSCCCSSCTTCTTCS
T ss_pred CCCCEEEEEcCCchHH-HHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhH-HHHHHhhhcccccccccccccccccc
Confidence 4567999999998432 4444443 48888887 789999987643111 111000
Q ss_pred --------ccCCeEEEeecchH-HHhc-ccCcceeeecCCcchHHHHHHcCCceeecccc----cchhHHHHHHHhhhcc
Q 012194 332 --------TSQKGLVVNWCPQL-EVLA-HEAAGCFLTHCGWNSTMEALSLGVPMVAMPQW----SDQSTNGKYIMDVWKM 397 (468)
Q Consensus 332 --------~~~nv~~~~~vpq~-~lL~-~~~~~~~I~HgG~~s~~Eal~~GvP~l~~P~~----~DQ~~na~~l~~~~g~ 397 (468)
..-++.+.+|+++. ++|+ +|++ +|||||.||++|++++|+|+|++|.. .||..||+++++. |+
T Consensus 104 ~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~-G~ 180 (224)
T 2jzc_A 104 ARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVEL-GY 180 (224)
T ss_dssp CEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHHH-SC
T ss_pred ccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHHC-CC
Confidence 01245667888876 9999 9999 99999999999999999999999984 4799999999999 99
Q ss_pred eeEecCCCCCccCHHHHHHHHHHH
Q 012194 398 GLKVPADEKGIVRREAIAHCISEI 421 (468)
Q Consensus 398 G~~l~~~~~~~~~~~~l~~~i~~l 421 (468)
|+.+. ++.|.++|.++
T Consensus 181 ~~~~~--------~~~L~~~i~~l 196 (224)
T 2jzc_A 181 VWSCA--------PTETGLIAGLR 196 (224)
T ss_dssp CCEEC--------SCTTTHHHHHH
T ss_pred EEEcC--------HHHHHHHHHHH
Confidence 87653 34666677666
No 25
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=99.55 E-value=7.7e-12 Score=123.43 Aligned_cols=374 Identities=15% Similarity=0.133 Sum_probs=194.4
Q ss_pred CCCcEEEEEcC-----------CCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEEcCCCCCCC
Q 012194 11 CRLVHCLVLSY-----------PAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEAISDGYDQG 79 (468)
Q Consensus 11 ~~~~~il~~~~-----------~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~~~~~~~ 79 (468)
++.|||++++. ...|+-..+..|++.|.++||+|++++........... ....++.++.++.....
T Consensus 18 ~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~--~~~~~v~v~~~~~~~~~- 94 (438)
T 3c48_A 18 GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVDIYTRATRPSQGEIV--RVAENLRVINIAAGPYE- 94 (438)
T ss_dssp -CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEEEEEECCCGGGCSEE--EEETTEEEEEECCSCSS-
T ss_pred cchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEEEEecCCCCCCcccc--cccCCeEEEEecCCCcc-
Confidence 55789999985 23577888999999999999999999875432111100 01237888887743211
Q ss_pred CCCccccHHHHHHHHHHhchHHHHHHHHH-hcCCCCCccEEEeCCCc--chHHHHHHHcCCceEEEcccchHHHHHHHHh
Q 012194 80 GSAQAESIEAYLEKFWQIGPRSLCELVEK-MNGSVVPVDCIVYDSFL--PWALDVAKKFGLVGAAFLTQSCAVDCIYYHV 156 (468)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-l~~~~~p~DlVI~D~~~--~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~ 156 (468)
... .......+..+. ..++.. +... ..+|+|++.... ..+..+++.+++|+|..........
T Consensus 95 ~~~-~~~~~~~~~~~~-------~~~~~~~~~~~-~~~Div~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~------ 159 (438)
T 3c48_A 95 GLS-KEELPTQLAAFT-------GGMLSFTRREK-VTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAAVK------ 159 (438)
T ss_dssp SCC-GGGGGGGHHHHH-------HHHHHHHHHHT-CCCSEEEEEHHHHHHHHHHHHHHHTCCEEEECSSCHHHH------
T ss_pred ccc-hhHHHHHHHHHH-------HHHHHHHHhcc-CCCCEEEeCCccHHHHHHHHHHHcCCCEEEEecCCcccc------
Confidence 111 111111111111 111222 1111 126999987533 2345577889999987654431110
Q ss_pred hccCCCCCCCCCccccCCCCCCCCCCCCcccccCCCchhHHHHHHHHHhhcccccCeEEecchhhchHHHHHHHhc-cCC
Q 012194 157 NKGLLKLPLPDSQLLLPGMPPLEPQDMPSFVYDLGSYPAVSDMVVKYQFDNIDKADWVLCNTFYELEEEVAEWLGK-LWS 235 (468)
Q Consensus 157 ~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~-~~p 235 (468)
...+ ..... ..........+ ..+...+.+++.|....+. ....+.- ..+
T Consensus 160 ---------------~~~~---~~~~~--------~~~~~~~~~~~---~~~~~~d~ii~~s~~~~~~-~~~~~g~~~~k 209 (438)
T 3c48_A 160 ---------------NSYR---DDSDT--------PESEARRICEQ---QLVDNADVLAVNTQEEMQD-LMHHYDADPDR 209 (438)
T ss_dssp ---------------SCC-------CC--------HHHHHHHHHHH---HHHHHCSEEEESSHHHHHH-HHHHHCCCGGG
T ss_pred ---------------cccc---cccCC--------cchHHHHHHHH---HHHhcCCEEEEcCHHHHHH-HHHHhCCChhh
Confidence 0000 00000 00111111111 2334577778777554432 2221211 011
Q ss_pred ceeecccCCCcccccccCCccccCCcCCCCC-h---hhHhHhhhcCCCCceEEEEecCcCC-CCHHHHHHHHHHHHh-C-
Q 012194 236 LKTIGPTVPSLYLDKQLEDDKDYGFSMFKPD-N---ESCIKWLNDRAKGSVVYVSFGSYAP-LKVEEMEELAWGLKA-T- 308 (468)
Q Consensus 236 ~~~vgp~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~l~~~~~~~~I~is~Gs~~~-~~~~~~~~~~~a~~~-~- 308 (468)
+..+..-+.... +.+. . ....+-+.- +.+..+++..|+... -..+.+...+..+.+ .
T Consensus 210 ~~vi~ngvd~~~---------------~~~~~~~~~~~~r~~~~~-~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p 273 (438)
T 3c48_A 210 ISVVSPGADVEL---------------YSPGNDRATERSRRELGI-PLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDP 273 (438)
T ss_dssp EEECCCCCCTTT---------------SCCC----CHHHHHHTTC-CSSSEEEEEESCBSGGGCHHHHHHHHHHHHHHCT
T ss_pred eEEecCCccccc---------------cCCcccchhhhhHHhcCC-CCCCcEEEEEeeecccCCHHHHHHHHHHHHhhCC
Confidence 223332221100 0110 1 112322222 223467778888763 233333333333332 2
Q ss_pred --CCeEEEEEeCCccCCCCcchh---hh--ccCCeEEEeecchH---HHhcccCcceeeec----CCcchHHHHHHcCCc
Q 012194 309 --NQYFLWVVRESEQAKLPENFS---DE--TSQKGLVVNWCPQL---EVLAHEAAGCFLTH----CGWNSTMEALSLGVP 374 (468)
Q Consensus 309 --~~~~i~~~~~~~~~~~~~~~~---~~--~~~nv~~~~~vpq~---~lL~~~~~~~~I~H----gG~~s~~Eal~~GvP 374 (468)
+.+++++..........+.+. ++ +.+||.+.+++|+. .+|..+++ +|.- |..+++.||+++|+|
T Consensus 274 ~~~~~l~i~G~~~~~g~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~P 351 (438)
T 3c48_A 274 DRNLRVIICGGPSGPNATPDTYRHMAEELGVEKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTP 351 (438)
T ss_dssp TCSEEEEEECCBC------CHHHHHHHHTTCTTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCC
T ss_pred CcceEEEEEeCCCCCCcHHHHHHHHHHHcCCCCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCC
Confidence 345544432111011122222 11 35789999999863 88999999 7764 335689999999999
Q ss_pred eeecccccchhHHHHHHHhhhcceeEecCCCCCccCHHHHHHHHHHHhcCcc-HHHHHHHHHHHHHHHHHHHHcCCCcHH
Q 012194 375 MVAMPQWSDQSTNGKYIMDVWKMGLKVPADEKGIVRREAIAHCISEILEGER-GKEIRQNAGKWSNFAKEAVAKGGSSDK 453 (468)
Q Consensus 375 ~l~~P~~~DQ~~na~~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~~~~~~~~~~~~~g~~~~ 453 (468)
+|+.+. ......++.. +.|..++.. +.+++.++|.++++|++ .+++.+++++..+.+. . ....+
T Consensus 352 vI~~~~----~~~~e~i~~~-~~g~~~~~~-----d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~~~s-~----~~~~~ 416 (438)
T 3c48_A 352 VIAARV----GGLPIAVAEG-ETGLLVDGH-----SPHAWADALATLLDDDETRIRMGEDAVEHARTFS-W----AATAA 416 (438)
T ss_dssp EEEESC----TTHHHHSCBT-TTEEEESSC-----CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH-H----HHHHH
T ss_pred EEecCC----CChhHHhhCC-CcEEECCCC-----CHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhCC-H----HHHHH
Confidence 998763 4556667677 789888754 89999999999999863 2456666666655532 1 23345
Q ss_pred HHHHHHHHHHhc
Q 012194 454 NIDDFVANLISS 465 (468)
Q Consensus 454 ~~~~~~~~l~~~ 465 (468)
.+.++.+++.+.
T Consensus 417 ~~~~~~~~~~~~ 428 (438)
T 3c48_A 417 QLSSLYNDAIAN 428 (438)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHhhh
Confidence 566666666654
No 26
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=99.52 E-value=3.3e-12 Score=124.03 Aligned_cols=328 Identities=14% Similarity=0.118 Sum_probs=178.0
Q ss_pred CCCcEEEEEcC--C--CccCHHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEEcCCCCCCCCCCcccc
Q 012194 11 CRLVHCLVLSY--P--AQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEAISDGYDQGGSAQAES 86 (468)
Q Consensus 11 ~~~~~il~~~~--~--~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~~~~~~~~~~~~~~ 86 (468)
+++|||++++. + ..|.-.-+..+++.| +||+|++++........... ....++.+..++....- . .
T Consensus 2 ~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L--~g~~v~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---~---~ 71 (394)
T 3okp_A 2 SASRKTLVVTNDFPPRIGGIQSYLRDFIATQ--DPESIVVFASTQNAEEAHAY--DKTLDYEVIRWPRSVML---P---T 71 (394)
T ss_dssp --CCCEEEEESCCTTSCSHHHHHHHHHHTTS--CGGGEEEEEECSSHHHHHHH--HTTCSSEEEEESSSSCC---S---C
T ss_pred CCCceEEEEeCccCCccchHHHHHHHHHHHh--cCCeEEEEECCCCccchhhh--ccccceEEEEccccccc---c---c
Confidence 45789999875 3 357778889999999 79999999987654311111 12347888888742211 1 1
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhcCCCCCccEEEeCCCc--chHHHHHHHcCCceEEEcccchHHHHHHHHhhccCCCCC
Q 012194 87 IEAYLEKFWQIGPRSLCELVEKMNGSVVPVDCIVYDSFL--PWALDVAKKFGLVGAAFLTQSCAVDCIYYHVNKGLLKLP 164 (468)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~~~--~~~~~~A~~lgiP~i~~~~~~~~~~~~~~~~~~~~~~~p 164 (468)
. .....+..++++. ++|+|++.... .....++..+++|.+++........
T Consensus 72 ~---------~~~~~l~~~~~~~-----~~Dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~-------------- 123 (394)
T 3okp_A 72 P---------TTAHAMAEIIRER-----EIDNVWFGAAAPLALMAGTAKQAGASKVIASTHGHEVG-------------- 123 (394)
T ss_dssp H---------HHHHHHHHHHHHT-----TCSEEEESSCTTGGGGHHHHHHTTCSEEEEECCSTHHH--------------
T ss_pred h---------hhHHHHHHHHHhc-----CCCEEEECCcchHHHHHHHHHhcCCCcEEEEeccchhh--------------
Confidence 1 0111233444442 36999976544 3356668899999555332220000
Q ss_pred CCCCccccCCCCCCCCCCCCcccccCCCchhHHHHHHHHHhhcccccCeEEecchhhchHHHHHHHhccCCceeecccCC
Q 012194 165 LPDSQLLLPGMPPLEPQDMPSFVYDLGSYPAVSDMVVKYQFDNIDKADWVLCNTFYELEEEVAEWLGKLWSLKTIGPTVP 244 (468)
Q Consensus 165 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~p~~~vgp~~~ 244 (468)
+............ .....+.+++.|....+. .........++..+..-+.
T Consensus 124 -------------------------~~~~~~~~~~~~~----~~~~~d~ii~~s~~~~~~-~~~~~~~~~~~~vi~ngv~ 173 (394)
T 3okp_A 124 -------------------------WSMLPGSRQSLRK----IGTEVDVLTYISQYTLRR-FKSAFGSHPTFEHLPSGVD 173 (394)
T ss_dssp -------------------------HTTSHHHHHHHHH----HHHHCSEEEESCHHHHHH-HHHHHCSSSEEEECCCCBC
T ss_pred -------------------------hhhcchhhHHHHH----HHHhCCEEEEcCHHHHHH-HHHhcCCCCCeEEecCCcC
Confidence 0011111111111 234567777777544332 2222221112333332221
Q ss_pred CcccccccCCccccCCcCCCC-Ch---hhHhHhhhcCCCCceEEEEecCcCC-CCHHHHHHHHHHHHh--CCCeEEEEEe
Q 012194 245 SLYLDKQLEDDKDYGFSMFKP-DN---ESCIKWLNDRAKGSVVYVSFGSYAP-LKVEEMEELAWGLKA--TNQYFLWVVR 317 (468)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~l~~~~~~~~I~is~Gs~~~-~~~~~~~~~~~a~~~--~~~~~i~~~~ 317 (468)
... +.+ .+ ..+.+.+.. +++..+++..|+... -..+.+...+..+.+ .+.+++++..
T Consensus 174 ~~~---------------~~~~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~ 237 (394)
T 3okp_A 174 VKR---------------FTPATPEDKSATRKKLGF-TDTTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLIVGS 237 (394)
T ss_dssp TTT---------------SCCCCHHHHHHHHHHTTC-CTTCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEEECC
T ss_pred HHH---------------cCCCCchhhHHHHHhcCC-CcCceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEcC
Confidence 100 111 11 222222322 233467778888753 233333333333332 2556665543
Q ss_pred CCccCCCCcchhhhccCCeEEEeecchH---HHhcccCcceeee-----------cCCcchHHHHHHcCCceeecccccc
Q 012194 318 ESEQAKLPENFSDETSQKGLVVNWCPQL---EVLAHEAAGCFLT-----------HCGWNSTMEALSLGVPMVAMPQWSD 383 (468)
Q Consensus 318 ~~~~~~~~~~~~~~~~~nv~~~~~vpq~---~lL~~~~~~~~I~-----------HgG~~s~~Eal~~GvP~l~~P~~~D 383 (468)
+.....+ ......+.++|.+.+++|+. .++..+++ +|. -|..+++.||+++|+|+|+.+..+-
T Consensus 238 g~~~~~l-~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~ 314 (394)
T 3okp_A 238 GRYESTL-RRLATDVSQNVKFLGRLEYQDMINTLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGA 314 (394)
T ss_dssp CTTHHHH-HHHTGGGGGGEEEEESCCHHHHHHHHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTG
T ss_pred chHHHHH-HHHHhcccCeEEEcCCCCHHHHHHHHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCCCCh
Confidence 2211111 01112346899999999855 68999999 886 5666799999999999999775321
Q ss_pred hhHHHHHHHhhhcceeEecCCCCCccCHHHHHHHHHHHhcCcc-HHHHHHHHHH
Q 012194 384 QSTNGKYIMDVWKMGLKVPADEKGIVRREAIAHCISEILEGER-GKEIRQNAGK 436 (468)
Q Consensus 384 Q~~na~~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~ 436 (468)
..+... |.|...+.. +.+++.++|.++++|++ .+++.+++++
T Consensus 315 -----~e~i~~-~~g~~~~~~-----d~~~l~~~i~~l~~~~~~~~~~~~~~~~ 357 (394)
T 3okp_A 315 -----PETVTP-ATGLVVEGS-----DVDKLSELLIELLDDPIRRAAMGAAGRA 357 (394)
T ss_dssp -----GGGCCT-TTEEECCTT-----CHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred -----HHHHhc-CCceEeCCC-----CHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 123344 567777754 89999999999999862 1334444444
No 27
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=99.51 E-value=1.1e-11 Score=122.06 Aligned_cols=370 Identities=13% Similarity=0.082 Sum_probs=184.7
Q ss_pred CCcEEEEEcCC-----CccCHHHHHHHHHHHHhCCCeEEEEeCCcccccccc--------------CCCCCCCCeEEEEc
Q 012194 12 RLVHCLVLSYP-----AQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHR--------------DSSSSSASIALEAI 72 (468)
Q Consensus 12 ~~~~il~~~~~-----~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~--------------~~~~~~~~i~f~~~ 72 (468)
++|||++++.. ..|--.-+..|+++|+++||+|+++++......... .......|+.+..+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~v~~~ 80 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTPSHGRFQGEEIGKIRVFGEEVQVKVSYEERGNLRIYRI 80 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEEEEEECTTCSCCEEEEEEEETTEEEEEEEEEEEETTEEEEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEEEEecCCCCchhhhhccccccCcccceeeeeccCCCceEEEe
Confidence 46999998843 335555688999999999999999996543221100 00001247777777
Q ss_pred CCCCCCCCCCccccHHHH-HHHHHHhchHHHHHHHHHhcCCCCCccEEEeCCCcc--hHHHHHHHcCCceEEEcccchHH
Q 012194 73 SDGYDQGGSAQAESIEAY-LEKFWQIGPRSLCELVEKMNGSVVPVDCIVYDSFLP--WALDVAKKFGLVGAAFLTQSCAV 149 (468)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~~~~--~~~~~A~~lgiP~i~~~~~~~~~ 149 (468)
+...-. ........... ...+.. ....+..++..+......+|+|.+..... .+..++...++|+|........
T Consensus 81 ~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~- 157 (439)
T 3fro_A 81 GGGLLD-SEDVYGPGWDGLIRKAVT-FGRASVLLLNDLLREEPLPDVVHFHDWHTVFAGALIKKYFKIPAVFTIHRLNK- 157 (439)
T ss_dssp ESGGGG-CSSTTCSHHHHHHHHHHH-HHHHHHHHHHHHTTTSCCCSEEEEESGGGHHHHHHHHHHHCCCEEEEESCCCC-
T ss_pred cchhcc-ccccccCCcchhhhhhHH-HHHHHHHHHHHHhccCCCCeEEEecchhhhhhHHHHhhccCCCEEEEeccccc-
Confidence 641111 01111111111 222221 22234455555522123469999876442 2566678899999875443300
Q ss_pred HHHHHHhhccCCCCCCCCCccccCCCCCCCC-CCCCcccccCCCchhHHHHHHHHHhhcccccCeEEecchhhchHHHHH
Q 012194 150 DCIYYHVNKGLLKLPLPDSQLLLPGMPPLEP-QDMPSFVYDLGSYPAVSDMVVKYQFDNIDKADWVLCNTFYELEEEVAE 228 (468)
Q Consensus 150 ~~~~~~~~~~~~~~p~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~ 228 (468)
..++.... ........ ......+.+. ....++.+++.|....+. ...
T Consensus 158 -----------------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~-------~~~~ad~ii~~S~~~~~~-~~~ 205 (439)
T 3fro_A 158 -----------------------SKLPAFYFHEAGLSELA-PYPDIDPEHT-------GGYIADIVTTVSRGYLID-EWG 205 (439)
T ss_dssp -----------------------CCEEHHHHHHTTCGGGC-CSSEECHHHH-------HHHHCSEEEESCHHHHHH-THH
T ss_pred -----------------------ccCchHHhCcccccccc-ccceeeHhhh-------hhhhccEEEecCHHHHHH-Hhh
Confidence 00000000 00000000 0000011111 223466777777544332 111
Q ss_pred HHh-ccCCceeecccCCCccccc-ccCCccccCCcCCCCChhhHhHhhhcCCCCceEEEEecCcC-CC-CHHHHHHHHHH
Q 012194 229 WLG-KLWSLKTIGPTVPSLYLDK-QLEDDKDYGFSMFKPDNESCIKWLNDRAKGSVVYVSFGSYA-PL-KVEEMEELAWG 304 (468)
Q Consensus 229 ~~~-~~~p~~~vgp~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~I~is~Gs~~-~~-~~~~~~~~~~a 304 (468)
.++ ...++..+..-+....+.. ..+... ......+.+-+.- +++ .+++..|+.. .. ..+.+...+..
T Consensus 206 ~~~~~~~~i~vi~ngvd~~~~~~~~~~~~~-------~~~~~~~~~~~~~-~~~-~~i~~~G~~~~~~Kg~~~li~a~~~ 276 (439)
T 3fro_A 206 FFRNFEGKITYVFNGIDCSFWNESYLTGSR-------DERKKSLLSKFGM-DEG-VTFMFIGRFDRGQKGVDVLLKAIEI 276 (439)
T ss_dssp HHGGGTTSEEECCCCCCTTTSCGGGSCSCH-------HHHHHHHHHHHTC-CSC-EEEEEECCSSCTTBCHHHHHHHHHH
T ss_pred hhhhcCCceeecCCCCCchhcCcccccchh-------hhhHHHHHHHcCC-CCC-cEEEEEcccccccccHHHHHHHHHH
Confidence 111 1112332222111100000 000000 0001222233332 233 7888889887 43 45555555555
Q ss_pred HHh----CCCeEEEEEeCCcc-CCCCcchhhhccCCeEEEeecchH---HHhcccCcceeeec----CCcchHHHHHHcC
Q 012194 305 LKA----TNQYFLWVVRESEQ-AKLPENFSDETSQKGLVVNWCPQL---EVLAHEAAGCFLTH----CGWNSTMEALSLG 372 (468)
Q Consensus 305 ~~~----~~~~~i~~~~~~~~-~~~~~~~~~~~~~nv~~~~~vpq~---~lL~~~~~~~~I~H----gG~~s~~Eal~~G 372 (468)
+.+ .+.+++++..+... ...-....+..++++.+.+|+|+. .++..+++ +|.- |-.+++.||+++|
T Consensus 277 l~~~~~~~~~~l~i~G~g~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G 354 (439)
T 3fro_A 277 LSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLG 354 (439)
T ss_dssp HHTSGGGGGEEEEEECCCCHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTTCSE--EEECBSCCSSCHHHHHHHHTT
T ss_pred HHhcccCCCeEEEEEcCCChhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHHCCE--EEeCCCCCCccHHHHHHHHCC
Confidence 554 34455544322211 000011223345556667889985 67899999 7743 4456999999999
Q ss_pred CceeecccccchhHHHHHHHhhhcceeEecCCCCCccCHHHHHHHHHHHhc-Ccc-HHHHHHHHHHHH
Q 012194 373 VPMVAMPQWSDQSTNGKYIMDVWKMGLKVPADEKGIVRREAIAHCISEILE-GER-GKEIRQNAGKWS 438 (468)
Q Consensus 373 vP~l~~P~~~DQ~~na~~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~-~~~-~~~~~~~a~~~~ 438 (468)
+|+|+... ..... +... |.|..++.. +.+++.++|.++++ |++ .+++.+++++..
T Consensus 355 ~Pvi~s~~----~~~~e-~~~~-~~g~~~~~~-----d~~~la~~i~~ll~~~~~~~~~~~~~~~~~~ 411 (439)
T 3fro_A 355 AIPIASAV----GGLRD-IITN-ETGILVKAG-----DPGELANAILKALELSRSDLSKFRENCKKRA 411 (439)
T ss_dssp CEEEEESS----THHHH-HCCT-TTCEEECTT-----CHHHHHHHHHHHHHHTTTTTHHHHHHHHHHH
T ss_pred CCeEEcCC----CCcce-eEEc-CceEEeCCC-----CHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 99998754 33333 4446 778888855 89999999999998 653 355666666544
No 28
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=99.48 E-value=3.3e-12 Score=124.62 Aligned_cols=165 Identities=16% Similarity=0.151 Sum_probs=100.6
Q ss_pred eEEEEecCc-CC-CCHHHHHHHHHHHHhC--CCeEEEEEeCCccCCCCcchhhhccCCeEEEeecchH---HHhcccCcc
Q 012194 282 VVYVSFGSY-AP-LKVEEMEELAWGLKAT--NQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQL---EVLAHEAAG 354 (468)
Q Consensus 282 ~I~is~Gs~-~~-~~~~~~~~~~~a~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~---~lL~~~~~~ 354 (468)
.+++..|+. .. -..+.+...+..+.+. +.+++++..+.. ..+. ...+...+||.+.+++|+. .+|..+++
T Consensus 209 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~~~~-~~l~-~~~~~~~~~v~~~g~~~~~~~~~~~~~adv- 285 (406)
T 2gek_A 209 RTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEILIVGRGDE-DELR-EQAGDLAGHLRFLGQVDDATKASAMRSADV- 285 (406)
T ss_dssp CEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEEEESCSCH-HHHH-HHTGGGGGGEEECCSCCHHHHHHHHHHSSE-
T ss_pred eEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEEEEcCCcH-HHHH-HHHHhccCcEEEEecCCHHHHHHHHHHCCE-
Confidence 577778887 42 2333333333334332 456554433221 1111 1112236789999999974 89999999
Q ss_pred eeeec----CCc-chHHHHHHcCCceeecccccchhHHHHHHHhhhcceeEecCCCCCccCHHHHHHHHHHHhcCcc-HH
Q 012194 355 CFLTH----CGW-NSTMEALSLGVPMVAMPQWSDQSTNGKYIMDVWKMGLKVPADEKGIVRREAIAHCISEILEGER-GK 428 (468)
Q Consensus 355 ~~I~H----gG~-~s~~Eal~~GvP~l~~P~~~DQ~~na~~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~-~~ 428 (468)
+|.- .|+ +++.||+++|+|+|+.+. ......+... +.|...+.. +.+++.++|.++++|++ .+
T Consensus 286 -~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~~-~~g~~~~~~-----d~~~l~~~i~~l~~~~~~~~ 354 (406)
T 2gek_A 286 -YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLADG-DAGRLVPVD-----DADGMAAALIGILEDDQLRA 354 (406)
T ss_dssp -EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTTT-TSSEECCTT-----CHHHHHHHHHHHHHCHHHHH
T ss_pred -EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcCC-CceEEeCCC-----CHHHHHHHHHHHHcCHHHHH
Confidence 7743 344 489999999999999765 5666777777 788888754 89999999999999862 12
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhc
Q 012194 429 EIRQNAGKWSNFAKEAVAKGGSSDKNIDDFVANLISS 465 (468)
Q Consensus 429 ~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~ 465 (468)
++.+++++..+.+.- ....+.+.++++++.+.
T Consensus 355 ~~~~~~~~~~~~~s~-----~~~~~~~~~~~~~~~~~ 386 (406)
T 2gek_A 355 GYVARASERVHRYDW-----SVVSAQIMRVYETVSGA 386 (406)
T ss_dssp HHHHHHHHHGGGGBH-----HHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHhCCH-----HHHHHHHHHHHHHHHhh
Confidence 333344333321110 11244555666666543
No 29
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=99.37 E-value=3.5e-11 Score=116.17 Aligned_cols=129 Identities=16% Similarity=0.203 Sum_probs=85.0
Q ss_pred CCceEEEEecCcCCCCHHHHHHHHHHHHhC-----CCeEEEEEeCCccCCCCcchhhh--ccCCeEEEeecch---HHHh
Q 012194 279 KGSVVYVSFGSYAPLKVEEMEELAWGLKAT-----NQYFLWVVRESEQAKLPENFSDE--TSQKGLVVNWCPQ---LEVL 348 (468)
Q Consensus 279 ~~~~I~is~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~~~~~~~--~~~nv~~~~~vpq---~~lL 348 (468)
+++.|+++.|...... .+..++++++.+ +.++++.++.... ..+.+.+. ..++|.+.+++++ ..+|
T Consensus 197 ~~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~~--~~~~l~~~~~~~~~v~~~g~~g~~~~~~~~ 272 (376)
T 1v4v_A 197 EGPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNPV--VREAVFPVLKGVRNFVLLDPLEYGSMAALM 272 (376)
T ss_dssp SSCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCHH--HHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCHH--HHHHHHHHhccCCCEEEECCCCHHHHHHHH
Confidence 3457778877653221 344455555432 4566555443310 11111111 1358999966554 4999
Q ss_pred cccCcceeeecCCcchHHHHHHcCCceeecccccchhHHHHHHHhhhcceeEecCCCCCccCHHHHHHHHHHHhcCc
Q 012194 349 AHEAAGCFLTHCGWNSTMEALSLGVPMVAMPQWSDQSTNGKYIMDVWKMGLKVPADEKGIVRREAIAHCISEILEGE 425 (468)
Q Consensus 349 ~~~~~~~~I~HgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 425 (468)
+.+++ ||+.+| |.+.||+++|+|+|+.+...++.. +.+. |.|..++ . ++++|.+++.++++|+
T Consensus 273 ~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~----~~~~-g~g~lv~-----~-d~~~la~~i~~ll~d~ 335 (376)
T 1v4v_A 273 RASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPE----GLKA-GILKLAG-----T-DPEGVYRVVKGLLENP 335 (376)
T ss_dssp HTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHH----HHHH-TSEEECC-----S-CHHHHHHHHHHHHTCH
T ss_pred HhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchh----hhcC-CceEECC-----C-CHHHHHHHHHHHHhCh
Confidence 99999 999984 456699999999999886666655 3567 8887764 2 8999999999999986
No 30
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=99.36 E-value=1e-10 Score=117.46 Aligned_cols=117 Identities=15% Similarity=0.106 Sum_probs=79.4
Q ss_pred ccCCeEEEeecchH---HHhccc----Ccceeeec----CCcchHHHHHHcCCceeecccccchhHHHHHHHhhhcceeE
Q 012194 332 TSQKGLVVNWCPQL---EVLAHE----AAGCFLTH----CGWNSTMEALSLGVPMVAMPQWSDQSTNGKYIMDVWKMGLK 400 (468)
Q Consensus 332 ~~~nv~~~~~vpq~---~lL~~~----~~~~~I~H----gG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~l~~~~g~G~~ 400 (468)
+.++|.+.+++|+. .+++.+ ++ +|.- |-..++.||+++|+|+|+... ......+... ..|..
T Consensus 333 l~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~g~l 405 (499)
T 2r60_A 333 CRGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDGG-KYGVL 405 (499)
T ss_dssp CBTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGGG-TSSEE
T ss_pred CCceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcCC-ceEEE
Confidence 35789999999864 788999 99 7743 334689999999999998763 3455566666 68988
Q ss_pred ecCCCCCccCHHHHHHHHHHHhcCcc-HHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHh
Q 012194 401 VPADEKGIVRREAIAHCISEILEGER-GKEIRQNAGKWSNFAKEAVAKGGSSDKNIDDFVANLIS 464 (468)
Q Consensus 401 l~~~~~~~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~ 464 (468)
++.. +.+++.++|.++++|++ .+++.+++++..+...+. ....+.+.++.+++.+
T Consensus 406 ~~~~-----d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~fs~----~~~~~~~~~~y~~~~~ 461 (499)
T 2r60_A 406 VDPE-----DPEDIARGLLKAFESEETWSAYQEKGKQRVEERYTW----QETARGYLEVIQEIAD 461 (499)
T ss_dssp ECTT-----CHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHSBH----HHHHHHHHHHHHHHHH
T ss_pred eCCC-----CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhCCH----HHHHHHHHHHHHHHHh
Confidence 8855 89999999999999863 234444444433331100 1224445555555554
No 31
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=99.35 E-value=1.1e-11 Score=118.20 Aligned_cols=158 Identities=10% Similarity=0.056 Sum_probs=102.5
Q ss_pred EEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEEeecchH---HHhcccCcceeee-
Q 012194 283 VYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQL---EVLAHEAAGCFLT- 358 (468)
Q Consensus 283 I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~---~lL~~~~~~~~I~- 358 (468)
+++..|+.. .......++++++..+.+++++..+...+.+ ..+.+..++||.+.+|+|+. .++..+++ +|.
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i~G~g~~~~~l-~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv--~v~p 238 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVLAGPAWEPEYF-DEITRRYGSTVEPIGEVGGERRLDLLASAHA--VLAM 238 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEEESCCCCHHHH-HHHHHHHTTTEEECCCCCHHHHHHHHHHCSE--EEEC
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEEEeCcccHHHH-HHHHHHhCCCEEEeccCCHHHHHHHHHhCCE--EEEC
Confidence 455667765 2334556677777667777655433211111 12233345899999999975 89999999 773
Q ss_pred ------------cCC-cchHHHHHHcCCceeecccccchhHHHHHHHh--hhcceeEecCCCCCccCHHHHHHHHHHHhc
Q 012194 359 ------------HCG-WNSTMEALSLGVPMVAMPQWSDQSTNGKYIMD--VWKMGLKVPADEKGIVRREAIAHCISEILE 423 (468)
Q Consensus 359 ------------HgG-~~s~~Eal~~GvP~l~~P~~~DQ~~na~~l~~--~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~ 423 (468)
+-| .+++.||+++|+|+|+... ......++. - +.|...+ . +.+++.++|.++++
T Consensus 239 s~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~----~~~~e~~~~~~~-~~g~~~~-----~-d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 239 SQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGN----GCLAEIVPSVGE-VVGYGTD-----F-APDEARRTLAGLPA 307 (342)
T ss_dssp CCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCT----TTHHHHGGGGEE-ECCSSSC-----C-CHHHHHHHHHTSCC
T ss_pred CcccccccccccccCccHHHHHHHhcCCCEEEcCC----CChHHHhcccCC-CceEEcC-----C-CHHHHHHHHHHHHH
Confidence 233 4579999999999999875 457777777 6 6676665 6 89999999999886
Q ss_pred CccHHHHHHHHHHHH-HHHHHHHHcCCCcHHHHHHHHHHHHhcCCC
Q 012194 424 GERGKEIRQNAGKWS-NFAKEAVAKGGSSDKNIDDFVANLISSKSF 468 (468)
Q Consensus 424 ~~~~~~~~~~a~~~~-~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~ 468 (468)
.+++++.. +.+.- ....+.+.++.+++.+..++
T Consensus 308 -------~~~~~~~~~~~~s~-----~~~~~~~~~~~~~~~~~~~~ 341 (342)
T 2iuy_A 308 -------SDEVRRAAVRLWGH-----VTIAERYVEQYRRLLAGATW 341 (342)
T ss_dssp -------HHHHHHHHHHHHBH-----HHHHHHHHHHHHHHHTTCCC
T ss_pred -------HHHHHHHHHHhcCH-----HHHHHHHHHHHHHHHccCCC
Confidence 22333322 22211 22355677777777776553
No 32
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=99.35 E-value=1.5e-11 Score=119.64 Aligned_cols=130 Identities=11% Similarity=0.157 Sum_probs=84.0
Q ss_pred CCceEEEEecCcCCCCHHHHHHHHHHHHh-----CCCeEEEEEeCCccCCCCcchhh--hccCCeEEEeecch---HHHh
Q 012194 279 KGSVVYVSFGSYAPLKVEEMEELAWGLKA-----TNQYFLWVVRESEQAKLPENFSD--ETSQKGLVVNWCPQ---LEVL 348 (468)
Q Consensus 279 ~~~~I~is~Gs~~~~~~~~~~~~~~a~~~-----~~~~~i~~~~~~~~~~~~~~~~~--~~~~nv~~~~~vpq---~~lL 348 (468)
+++.++++.|...... +.+..+++++.. .+.++|+..+.+.. +.+.+.+ ...+|+++.+++++ ..++
T Consensus 223 ~~~~vlv~~~r~~~~~-~~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~--~~~~l~~~~~~~~~v~l~~~l~~~~~~~l~ 299 (403)
T 3ot5_A 223 DNRLILMTAHRRENLG-EPMQGMFEAVREIVESREDTELVYPMHLNPA--VREKAMAILGGHERIHLIEPLDAIDFHNFL 299 (403)
T ss_dssp TCEEEEECCCCHHHHT-THHHHHHHHHHHHHHHCTTEEEEEECCSCHH--HHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCCEEEEEeCcccccC-cHHHHHHHHHHHHHHhCCCceEEEecCCCHH--HHHHHHHHhCCCCCEEEeCCCCHHHHHHHH
Confidence 4557777765422111 123455555443 24567666543210 1111111 12368999998873 4899
Q ss_pred cccCcceeeecCCcchHHHHHHcCCceeecccccchhHHHHHHHhhhcceeEecCCCCCccCHHHHHHHHHHHhcCc
Q 012194 349 AHEAAGCFLTHCGWNSTMEALSLGVPMVAMPQWSDQSTNGKYIMDVWKMGLKVPADEKGIVRREAIAHCISEILEGE 425 (468)
Q Consensus 349 ~~~~~~~~I~HgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 425 (468)
+.+++ +|+-.|..+ .||.++|+|+|++|-..+++. +.+. |.|+.+. . ++++|.+++.++++|+
T Consensus 300 ~~ad~--vv~~SGg~~-~EA~a~g~PvV~~~~~~~~~e----~v~~-g~~~lv~-----~-d~~~l~~ai~~ll~~~ 362 (403)
T 3ot5_A 300 RKSYL--VFTDSGGVQ-EEAPGMGVPVLVLRDTTERPE----GIEA-GTLKLIG-----T-NKENLIKEALDLLDNK 362 (403)
T ss_dssp HHEEE--EEECCHHHH-HHGGGTTCCEEECCSSCSCHH----HHHH-TSEEECC-----S-CHHHHHHHHHHHHHCH
T ss_pred HhcCE--EEECCccHH-HHHHHhCCCEEEecCCCcchh----heeC-CcEEEcC-----C-CHHHHHHHHHHHHcCH
Confidence 99999 999875333 799999999999975555544 3578 8776665 2 7999999999999986
No 33
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=99.33 E-value=4.7e-10 Score=108.99 Aligned_cols=333 Identities=14% Similarity=0.119 Sum_probs=168.4
Q ss_pred CcEEEEEcCCCc-cCHHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEEcCCCCCCCCCCccccHHHHH
Q 012194 13 LVHCLVLSYPAQ-GHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEAISDGYDQGGSAQAESIEAYL 91 (468)
Q Consensus 13 ~~~il~~~~~~~-GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~~~~~~~~~~~~~~~~~~~ 91 (468)
+.++....+|.. |.-.-+..|+++|.++||+|++++......... ...++.+..++..... ..... .. ..
T Consensus 15 ~~~~~~~~~p~~GG~~~~~~~la~~L~~~G~~V~v~~~~~~~~~~~-----~~~~i~~~~~~~~~~~-~~~~~-~~--~~ 85 (394)
T 2jjm_A 15 KLKIGITCYPSVGGSGVVGTELGKQLAERGHEIHFITSGLPFRLNK-----VYPNIYFHEVTVNQYS-VFQYP-PY--DL 85 (394)
T ss_dssp CCEEEEECCC--CHHHHHHHHHHHHHHHTTCEEEEECSSCC----C-----CCTTEEEECCCCC-----CCSC-CH--HH
T ss_pred eeeeehhcCCCCCCHHHHHHHHHHHHHhCCCEEEEEeCCCCCcccc-----cCCceEEEeccccccc-ccccc-cc--cH
Confidence 356776666654 666778899999999999999999754322111 2347777766532111 01100 00 00
Q ss_pred HHHHHhchHHHHHHHHHhcCCCCCccEEEeCCCcch--HHHHHH-Hc--CCceEEEcccchHHHHHHHHhhccCCCCCCC
Q 012194 92 EKFWQIGPRSLCELVEKMNGSVVPVDCIVYDSFLPW--ALDVAK-KF--GLVGAAFLTQSCAVDCIYYHVNKGLLKLPLP 166 (468)
Q Consensus 92 ~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~~~~~--~~~~A~-~l--giP~i~~~~~~~~~~~~~~~~~~~~~~~p~~ 166 (468)
. ....+..++++. ++|+|++...... ...++. .+ ++|++.........
T Consensus 86 ~-----~~~~l~~~l~~~-----~~Dvv~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~----------------- 138 (394)
T 2jjm_A 86 A-----LASKMAEVAQRE-----NLDILHVHYAIPHAICAYLAKQMIGERIKIVTTLHGTDIT----------------- 138 (394)
T ss_dssp H-----HHHHHHHHHHHH-----TCSEEEECSSTTHHHHHHHHHHHTTTCSEEEEECCHHHHH-----------------
T ss_pred H-----HHHHHHHHHHHc-----CCCEEEEcchhHHHHHHHHHHHhhcCCCCEEEEEecCccc-----------------
Confidence 1 112234444443 2699998754322 233344 33 59988754322000
Q ss_pred CCccccCCCCCCCCCCCCcccccCCCchhHHHHHHHHHhhcccccCeEEecchhhchHHHHHHHhccCCceeecccCCCc
Q 012194 167 DSQLLLPGMPPLEPQDMPSFVYDLGSYPAVSDMVVKYQFDNIDKADWVLCNTFYELEEEVAEWLGKLWSLKTIGPTVPSL 246 (468)
Q Consensus 167 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~le~~~~~~~~~~~p~~~vgp~~~~~ 246 (468)
..+. ......+.+. .+..++.+++.|....+. .........++..+..-+...
T Consensus 139 -----~~~~--------------~~~~~~~~~~-------~~~~ad~ii~~s~~~~~~-~~~~~~~~~~~~vi~ngv~~~ 191 (394)
T 2jjm_A 139 -----VLGS--------------DPSLNNLIRF-------GIEQSDVVTAVSHSLINE-THELVKPNKDIQTVYNFIDER 191 (394)
T ss_dssp -----TTTT--------------CTTTHHHHHH-------HHHHSSEEEESCHHHHHH-HHHHTCCSSCEEECCCCCCTT
T ss_pred -----ccCC--------------CHHHHHHHHH-------HHhhCCEEEECCHHHHHH-HHHhhCCcccEEEecCCccHH
Confidence 0000 0001111111 233466777777543332 222221111233332221110
Q ss_pred ccccccCCccccCCcCCCC-ChhhHhHhhhcCCCCceEEEEecCcCC-CCHHHHHHHHHHHHh-CCCeEEEEEeCCccCC
Q 012194 247 YLDKQLEDDKDYGFSMFKP-DNESCIKWLNDRAKGSVVYVSFGSYAP-LKVEEMEELAWGLKA-TNQYFLWVVRESEQAK 323 (468)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~I~is~Gs~~~-~~~~~~~~~~~a~~~-~~~~~i~~~~~~~~~~ 323 (468)
. +.+ ......+-+.. +++..+++..|.... -..+.+...+..+.+ .+.+++++..+.....
T Consensus 192 ~---------------~~~~~~~~~~~~~~~-~~~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~~~~ 255 (394)
T 2jjm_A 192 V---------------YFKRDMTQLKKEYGI-SESEKILIHISNFRKVKRVQDVVQAFAKIVTEVDAKLLLVGDGPEFCT 255 (394)
T ss_dssp T---------------CCCCCCHHHHHHTTC-C---CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCEEEEECCCTTHHH
T ss_pred h---------------cCCcchHHHHHHcCC-CCCCeEEEEeeccccccCHHHHHHHHHHHHhhCCCEEEEECCchHHHH
Confidence 0 011 11223222222 123356677788763 223333333333333 3555554432221110
Q ss_pred CCcchhhh--ccCCeEEEeecch-HHHhcccCcceee----ecCCcchHHHHHHcCCceeecccccchhHHHHHHHhhhc
Q 012194 324 LPENFSDE--TSQKGLVVNWCPQ-LEVLAHEAAGCFL----THCGWNSTMEALSLGVPMVAMPQWSDQSTNGKYIMDVWK 396 (468)
Q Consensus 324 ~~~~~~~~--~~~nv~~~~~vpq-~~lL~~~~~~~~I----~HgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~l~~~~g 396 (468)
+ ....+. +.+||.+.++..+ ..+|..+++ +| .-|..+++.||+++|+|+|+.+.. .....++.. +
T Consensus 256 l-~~~~~~~~l~~~v~~~g~~~~~~~~~~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e~v~~~-~ 327 (394)
T 2jjm_A 256 I-LQLVKNLHIEDRVLFLGKQDNVAELLAMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPEVIQHG-D 327 (394)
T ss_dssp H-HHHHHTTTCGGGBCCCBSCSCTHHHHHTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTTTCCBT-T
T ss_pred H-HHHHHHcCCCCeEEEeCchhhHHHHHHhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----ChHHHhhcC-C
Confidence 1 011111 2478888887665 499999999 88 556677999999999999997753 334445555 6
Q ss_pred ceeEecCCCCCccCHHHHHHHHHHHhcCcc-HHHHHHHHHHH
Q 012194 397 MGLKVPADEKGIVRREAIAHCISEILEGER-GKEIRQNAGKW 437 (468)
Q Consensus 397 ~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~-~~~~~~~a~~~ 437 (468)
.|...+.. +.+++.++|.++++|++ .+++.+++++.
T Consensus 328 ~g~~~~~~-----d~~~la~~i~~l~~~~~~~~~~~~~~~~~ 364 (394)
T 2jjm_A 328 TGYLCEVG-----DTTGVADQAIQLLKDEELHRNMGERARES 364 (394)
T ss_dssp TEEEECTT-----CHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred ceEEeCCC-----CHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 78888754 89999999999999862 23344444443
No 34
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=99.31 E-value=2.5e-09 Score=102.84 Aligned_cols=143 Identities=15% Similarity=0.224 Sum_probs=95.0
Q ss_pred CceEEEEecCcCCCCHHHHHHHHHHHHhC------CCeEEEEEeCCccCCCCcchhhh--ccCCeEEEeecchH-HHhcc
Q 012194 280 GSVVYVSFGSYAPLKVEEMEELAWGLKAT------NQYFLWVVRESEQAKLPENFSDE--TSQKGLVVNWCPQL-EVLAH 350 (468)
Q Consensus 280 ~~~I~is~Gs~~~~~~~~~~~~~~a~~~~------~~~~i~~~~~~~~~~~~~~~~~~--~~~nv~~~~~vpq~-~lL~~ 350 (468)
+..+++..|+... ......+++++..+ +.++++ +|......+ ....+. +.+||.+.++..+. .+++.
T Consensus 195 ~~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i-~G~g~~~~~-~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 270 (374)
T 2iw1_A 195 QQNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFV-VGQDKPRKF-EALAEKLGVRSNVHFFSGRNDVSELMAA 270 (374)
T ss_dssp TCEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEE-ESSSCCHHH-HHHHHHHTCGGGEEEESCCSCHHHHHHH
T ss_pred CCeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEE-EcCCCHHHH-HHHHHHcCCCCcEEECCCcccHHHHHHh
Confidence 4467778888753 23345556666654 334443 333211111 111111 35789999987654 89999
Q ss_pred cCcceeee----cCCcchHHHHHHcCCceeecccccchhHHHHHHHhhhcceeEec-CCCCCccCHHHHHHHHHHHhcCc
Q 012194 351 EAAGCFLT----HCGWNSTMEALSLGVPMVAMPQWSDQSTNGKYIMDVWKMGLKVP-ADEKGIVRREAIAHCISEILEGE 425 (468)
Q Consensus 351 ~~~~~~I~----HgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~l~~~~g~G~~l~-~~~~~~~~~~~l~~~i~~ll~~~ 425 (468)
+++ +|. -|..+++.||+++|+|+|+... ..+...+++. +.|..+. .. +.+++.++|.++++|+
T Consensus 271 ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i~~~-~~g~~~~~~~-----~~~~l~~~i~~l~~~~ 338 (374)
T 2iw1_A 271 ADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYIADA-NCGTVIAEPF-----SQEQLNEVLRKALTQS 338 (374)
T ss_dssp CSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHHHHH-TCEEEECSSC-----CHHHHHHHHHHHHHCH
T ss_pred cCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhhccC-CceEEeCCCC-----CHHHHHHHHHHHHcCh
Confidence 999 886 5677899999999999999765 3556778888 8898886 44 8999999999999986
Q ss_pred c-HHHHHHHHHHHH
Q 012194 426 R-GKEIRQNAGKWS 438 (468)
Q Consensus 426 ~-~~~~~~~a~~~~ 438 (468)
+ .+++.+++++..
T Consensus 339 ~~~~~~~~~~~~~~ 352 (374)
T 2iw1_A 339 PLRMAWAENARHYA 352 (374)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 2 133444444433
No 35
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=99.27 E-value=3e-10 Score=110.18 Aligned_cols=130 Identities=16% Similarity=0.166 Sum_probs=83.8
Q ss_pred CCceEEEEecCcCCCCHHHHHHHHHHHHhC-----CCeEEEEEeCCccCCCCcchhhh--ccCCeEEEeecc---hHHHh
Q 012194 279 KGSVVYVSFGSYAPLKVEEMEELAWGLKAT-----NQYFLWVVRESEQAKLPENFSDE--TSQKGLVVNWCP---QLEVL 348 (468)
Q Consensus 279 ~~~~I~is~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~~~~~~~--~~~nv~~~~~vp---q~~lL 348 (468)
+++.|+++.+-..+... .+..+++++..+ +.++++.++.+.. ..+.+.+. ..+|+++.++++ ...++
T Consensus 229 ~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~~~v~~~g~~~~--~~~~l~~~~~~~~~v~~~~~lg~~~~~~l~ 305 (396)
T 3dzc_A 229 SKKLILVTGHRRESFGG-GFERICQALITTAEQHPECQILYPVHLNPN--VREPVNKLLKGVSNIVLIEPQQYLPFVYLM 305 (396)
T ss_dssp TSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTEEEEEECCBCHH--HHHHHHHHTTTCTTEEEECCCCHHHHHHHH
T ss_pred CCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCceEEEEeCCChH--HHHHHHHHHcCCCCEEEeCCCCHHHHHHHH
Confidence 45677776532222222 245666665432 5566665543210 11111111 236899988775 34899
Q ss_pred cccCcceeeecCCcchHHHHHHcCCceeecccccchhHHHHHHHhhhcceeEecCCCCCccCHHHHHHHHHHHhcCc
Q 012194 349 AHEAAGCFLTHCGWNSTMEALSLGVPMVAMPQWSDQSTNGKYIMDVWKMGLKVPADEKGIVRREAIAHCISEILEGE 425 (468)
Q Consensus 349 ~~~~~~~~I~HgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 425 (468)
+.+++ +|+-.| |.+.||+++|+|+|+..-..+++ .+.+. |.++.+. . ++++|.+++.++++|+
T Consensus 306 ~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~----e~v~~-G~~~lv~-----~-d~~~l~~ai~~ll~d~ 368 (396)
T 3dzc_A 306 DRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERP----EAVAA-GTVKLVG-----T-NQQQICDALSLLLTDP 368 (396)
T ss_dssp HHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCH----HHHHH-TSEEECT-----T-CHHHHHHHHHHHHHCH
T ss_pred HhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcch----HHHHc-CceEEcC-----C-CHHHHHHHHHHHHcCH
Confidence 99999 999998 66689999999999985444443 24677 8775543 2 6899999999999996
No 36
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=99.26 E-value=4.2e-10 Score=108.85 Aligned_cols=130 Identities=16% Similarity=0.204 Sum_probs=86.6
Q ss_pred CCceEEEEecCcCCCCHHHHHHHHHHHHh----C-CCeEEEEEeCCccCCCCcchhhhc--cCCeEEEeecch---HHHh
Q 012194 279 KGSVVYVSFGSYAPLKVEEMEELAWGLKA----T-NQYFLWVVRESEQAKLPENFSDET--SQKGLVVNWCPQ---LEVL 348 (468)
Q Consensus 279 ~~~~I~is~Gs~~~~~~~~~~~~~~a~~~----~-~~~~i~~~~~~~~~~~~~~~~~~~--~~nv~~~~~vpq---~~lL 348 (468)
+++.|+++.|...... ..+..+++++.. . +.++++..+... ...+.+.+.. .+||.+.+++++ ..+|
T Consensus 204 ~~~~vl~~~gr~~~~~-kg~~~li~a~~~l~~~~~~~~l~i~~g~~~--~~~~~l~~~~~~~~~v~~~g~~~~~~~~~~~ 280 (384)
T 1vgv_A 204 DKKMILVTGHRRESFG-RGFEEICHALADIATTHQDIQIVYPVHLNP--NVREPVNRILGHVKNVILIDPQEYLPFVWLM 280 (384)
T ss_dssp TSEEEEEECCCBSSCC-HHHHHHHHHHHHHHHHCTTEEEEEECCBCH--HHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCCEEEEEeCCccccc-hHHHHHHHHHHHHHhhCCCeEEEEEcCCCH--HHHHHHHHHhhcCCCEEEeCCCCHHHHHHHH
Confidence 3557888888765432 234555555543 2 456655433221 0111111111 268999777664 4889
Q ss_pred cccCcceeeecCCcchHHHHHHcCCceeecccccchhHHHHHHHhhhcceeEecCCCCCccCHHHHHHHHHHHhcCc
Q 012194 349 AHEAAGCFLTHCGWNSTMEALSLGVPMVAMPQWSDQSTNGKYIMDVWKMGLKVPADEKGIVRREAIAHCISEILEGE 425 (468)
Q Consensus 349 ~~~~~~~~I~HgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 425 (468)
+.+++ ||+.+| +++.||+++|+|+|+.+...+. ..+.+. |.|..++ . ++++|.++|.++++|+
T Consensus 281 ~~ad~--~v~~Sg-~~~lEA~a~G~PvI~~~~~~~~----~e~v~~-g~g~lv~-----~-d~~~la~~i~~ll~d~ 343 (384)
T 1vgv_A 281 NHAWL--ILTDSG-GIQEEAPSLGKPVLVMRDTTER----PEAVTA-GTVRLVG-----T-DKQRIVEEVTRLLKDE 343 (384)
T ss_dssp HHCSE--EEESSS-TGGGTGGGGTCCEEEESSCCSC----HHHHHH-TSEEEEC-----S-SHHHHHHHHHHHHHCH
T ss_pred HhCcE--EEECCc-chHHHHHHcCCCEEEccCCCCc----chhhhC-CceEEeC-----C-CHHHHHHHHHHHHhCh
Confidence 99999 999985 4588999999999999874443 335677 8888776 3 8899999999999986
No 37
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=99.21 E-value=4.8e-09 Score=101.00 Aligned_cols=130 Identities=18% Similarity=0.180 Sum_probs=83.6
Q ss_pred CCceEEEEecCcCCCCHHHHHHHHHHHHhC-----CCeEEEEEeCCccCCCCcchhhhcc--CCeEEEeecchH---HHh
Q 012194 279 KGSVVYVSFGSYAPLKVEEMEELAWGLKAT-----NQYFLWVVRESEQAKLPENFSDETS--QKGLVVNWCPQL---EVL 348 (468)
Q Consensus 279 ~~~~I~is~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~~~~~~~~~~~--~nv~~~~~vpq~---~lL 348 (468)
+++.++++.|...... ..+..+++++..+ +.++++ +......+.+.+.+.+. +||.+.+++++. .+|
T Consensus 204 ~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~--~~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 280 (375)
T 3beo_A 204 NNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVY--PVHMNPVVRETANDILGDYGRIHLIEPLDVIDFHNVA 280 (375)
T ss_dssp TSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEE--ECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHH
T ss_pred CCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEE--eCCCCHHHHHHHHHHhhccCCEEEeCCCCHHHHHHHH
Confidence 3456777888754321 3355566665432 345443 22211101111111122 689997777653 889
Q ss_pred cccCcceeeecCCcchHHHHHHcCCceeecccccchhHHHHHHHhhhcceeEecCCCCCccCHHHHHHHHHHHhcCc
Q 012194 349 AHEAAGCFLTHCGWNSTMEALSLGVPMVAMPQWSDQSTNGKYIMDVWKMGLKVPADEKGIVRREAIAHCISEILEGE 425 (468)
Q Consensus 349 ~~~~~~~~I~HgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 425 (468)
+.+++ +|+..| +++.||+++|+|+|+....... ..+.+. |.|..++ . ++++|.++|.++++|+
T Consensus 281 ~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~----~e~v~~-g~g~~v~-----~-d~~~la~~i~~ll~~~ 343 (375)
T 3beo_A 281 ARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTER----PEGIEA-GTLKLAG-----T-DEETIFSLADELLSDK 343 (375)
T ss_dssp HTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSC----HHHHHT-TSEEECC-----S-CHHHHHHHHHHHHHCH
T ss_pred HhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCC----ceeecC-CceEEcC-----C-CHHHHHHHHHHHHhCh
Confidence 99999 999874 5588999999999998543332 334677 8787765 3 7899999999999986
No 38
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=99.13 E-value=1.4e-08 Score=99.22 Aligned_cols=131 Identities=13% Similarity=0.054 Sum_probs=85.2
Q ss_pred ceEEEEecCcCCC-CHHHHHHHHHHHHh--CCCeEEEEEeCCccCC-CC---cchhhh--ccCCeEEEeecc-----h-H
Q 012194 281 SVVYVSFGSYAPL-KVEEMEELAWGLKA--TNQYFLWVVRESEQAK-LP---ENFSDE--TSQKGLVVNWCP-----Q-L 345 (468)
Q Consensus 281 ~~I~is~Gs~~~~-~~~~~~~~~~a~~~--~~~~~i~~~~~~~~~~-~~---~~~~~~--~~~nv~~~~~vp-----q-~ 345 (468)
..+++..|..... ..+.+...+..+.+ .+.+++++..+..... .. ..+.+. ..++|.+.+|++ + .
T Consensus 231 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~~~~~V~~~G~~~~~~~~~~~ 310 (416)
T 2x6q_A 231 KPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVN 310 (416)
T ss_dssp SCEEEEECCCCTTSCHHHHHHHHHHHHHHCTTCEEEEEECCCTTCHHHHHHHHHHHHHHTTCTTEEEEEGGGTCCHHHHH
T ss_pred CcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEEecCcccchhHHHHHHHHHHHhCCCCcEEEecccCCCCHHHHH
Confidence 3567777887642 33443333333332 2567766654321100 00 011111 347999999886 2 3
Q ss_pred HHhcccCcceeeecC----CcchHHHHHHcCCceeecccccchhHHHHHHHhhhcceeEecCCCCCccCHHHHHHHHHHH
Q 012194 346 EVLAHEAAGCFLTHC----GWNSTMEALSLGVPMVAMPQWSDQSTNGKYIMDVWKMGLKVPADEKGIVRREAIAHCISEI 421 (468)
Q Consensus 346 ~lL~~~~~~~~I~Hg----G~~s~~Eal~~GvP~l~~P~~~DQ~~na~~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~l 421 (468)
.+++.+++ +|.-. ..+++.||+++|+|+|+.+. ..+...++.. +.|...+ +.+++.++|.++
T Consensus 311 ~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~~-~~g~l~~-------d~~~la~~i~~l 376 (416)
T 2x6q_A 311 AFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVDG-ETGFLVR-------DANEAVEVVLYL 376 (416)
T ss_dssp HHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCBT-TTEEEES-------SHHHHHHHHHHH
T ss_pred HHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheecC-CCeEEEC-------CHHHHHHHHHHH
Confidence 78999999 88654 45689999999999999764 4566667666 7787774 688999999999
Q ss_pred hcCc
Q 012194 422 LEGE 425 (468)
Q Consensus 422 l~~~ 425 (468)
++|+
T Consensus 377 l~~~ 380 (416)
T 2x6q_A 377 LKHP 380 (416)
T ss_dssp HHCH
T ss_pred HhCH
Confidence 9986
No 39
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=98.90 E-value=1.2e-06 Score=85.18 Aligned_cols=114 Identities=11% Similarity=-0.005 Sum_probs=78.5
Q ss_pred eEEEEecCcCCCCHHHHHHHHHHHHh--CCCeEEEEEeCCccCCCCcchhhhccCCeEEEeecchH---HHhcccCccee
Q 012194 282 VVYVSFGSYAPLKVEEMEELAWGLKA--TNQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQL---EVLAHEAAGCF 356 (468)
Q Consensus 282 ~I~is~Gs~~~~~~~~~~~~~~a~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~---~lL~~~~~~~~ 356 (468)
.+++..|.+... ... +.++.+ .+.+++++ |... . ... .+.+||.+.+++|+. .+++.+++ +
T Consensus 223 ~~i~~vGrl~~~-Kg~----~~~l~~~~~~~~l~iv-G~g~---~-~~~--~l~~~V~f~G~~~~~~l~~~~~~adv--~ 288 (406)
T 2hy7_A 223 IHAVAVGSMLFD-PEF----FVVASKAFPQVTFHVI-GSGM---G-RHP--GYGDNVIVYGEMKHAQTIGYIKHARF--G 288 (406)
T ss_dssp EEEEEECCTTBC-HHH----HHHHHHHCTTEEEEEE-SCSS---C-CCT--TCCTTEEEECCCCHHHHHHHHHTCSE--E
T ss_pred cEEEEEeccccc-cCH----HHHHHHhCCCeEEEEE-eCch---H-Hhc--CCCCCEEEcCCCCHHHHHHHHHhcCE--E
Confidence 677788888642 222 333332 24455544 3321 1 111 146889999999864 78999999 7
Q ss_pred ee---cCC-cchHHHHH-------HcCCceeecccccchhHHHHHHHhhhcceeE-ecCCCCCccCHHHHHHHHHHHhcC
Q 012194 357 LT---HCG-WNSTMEAL-------SLGVPMVAMPQWSDQSTNGKYIMDVWKMGLK-VPADEKGIVRREAIAHCISEILEG 424 (468)
Q Consensus 357 I~---HgG-~~s~~Eal-------~~GvP~l~~P~~~DQ~~na~~l~~~~g~G~~-l~~~~~~~~~~~~l~~~i~~ll~~ 424 (468)
|. +-| .+++.||+ ++|+|+|+... +... ..|.. ++.. +++++.++|.++++|
T Consensus 289 v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~~-~~G~l~v~~~-----d~~~la~ai~~ll~~ 352 (406)
T 2hy7_A 289 IAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVGP-YKSRFGYTPG-----NADSVIAAITQALEA 352 (406)
T ss_dssp ECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTCS-CSSEEEECTT-----CHHHHHHHHHHHHHC
T ss_pred EECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------cccC-cceEEEeCCC-----CHHHHHHHHHHHHhC
Confidence 74 334 45789999 99999999765 5555 66877 7755 899999999999998
Q ss_pred c
Q 012194 425 E 425 (468)
Q Consensus 425 ~ 425 (468)
+
T Consensus 353 ~ 353 (406)
T 2hy7_A 353 P 353 (406)
T ss_dssp C
T ss_pred c
Confidence 6
No 40
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.90 E-value=5.7e-09 Score=100.43 Aligned_cols=131 Identities=16% Similarity=0.191 Sum_probs=85.5
Q ss_pred CceEEEEecCcCCCC-HHHHHHHHHHHHhC----CCeEEEEEeCCccCCCCcch-h-hhccCCeEEEeecc---hHHHhc
Q 012194 280 GSVVYVSFGSYAPLK-VEEMEELAWGLKAT----NQYFLWVVRESEQAKLPENF-S-DETSQKGLVVNWCP---QLEVLA 349 (468)
Q Consensus 280 ~~~I~is~Gs~~~~~-~~~~~~~~~a~~~~----~~~~i~~~~~~~~~~~~~~~-~-~~~~~nv~~~~~vp---q~~lL~ 349 (468)
++.|+++.|...... .+.+..+++++.++ +.++|+..++.-...+ ..+ . -...+|+.+.+.++ ...+++
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~~~~~l-~~~~~~~~~~~~v~l~~~lg~~~~~~l~~ 281 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPRTKKRL-EDLEGFKELGDKIRFLPAFSFTDYVKLQM 281 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHHHHHHH-HTSGGGGGTGGGEEECCCCCHHHHHHHHH
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChHHHHHH-HHHHHHhcCCCCEEEEcCCCHHHHHHHHH
Confidence 568888888764332 24566677776543 5677776542210000 000 0 00135788876655 458999
Q ss_pred ccCcceeeecCCcchHHHHHHcCCceeecccccchhHHHHHHHhhhcceeEecCCCCCccCHHHHHHHHHHHhcCc
Q 012194 350 HEAAGCFLTHCGWNSTMEALSLGVPMVAMPQWSDQSTNGKYIMDVWKMGLKVPADEKGIVRREAIAHCISEILEGE 425 (468)
Q Consensus 350 ~~~~~~~I~HgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~ 425 (468)
++++ +|+-.|. .+.||.++|+|+|+++...+.+. ..+. |.++.+. .++++|.+++.++|+|+
T Consensus 282 ~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e----~v~~-G~~~lv~------~d~~~i~~ai~~ll~d~ 343 (385)
T 4hwg_A 282 NAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE----GMDA-GTLIMSG------FKAERVLQAVKTITEEH 343 (385)
T ss_dssp HCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH----HHHH-TCCEECC------SSHHHHHHHHHHHHTTC
T ss_pred hCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh----hhhc-CceEEcC------CCHHHHHHHHHHHHhCh
Confidence 9999 9999876 46999999999999987544222 3567 8776553 27899999999999986
No 41
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=98.88 E-value=3.6e-07 Score=91.13 Aligned_cols=131 Identities=9% Similarity=0.008 Sum_probs=81.8
Q ss_pred eEEEEecCcCCC-CHHHHHHHHHHHHhCCCeEEEEEeCCc--cCCCCcchhhhccCCeE-EEeecchH--HHhcccCcce
Q 012194 282 VVYVSFGSYAPL-KVEEMEELAWGLKATNQYFLWVVRESE--QAKLPENFSDETSQKGL-VVNWCPQL--EVLAHEAAGC 355 (468)
Q Consensus 282 ~I~is~Gs~~~~-~~~~~~~~~~a~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~nv~-~~~~vpq~--~lL~~~~~~~ 355 (468)
.+++..|..... ..+.+...+..+.+.+.+++++..+.. .+.+ ....++.++||. +.++.... .+++.+++
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l-~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv-- 368 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGAL-LAAASRHHGRVGVAIGYNEPLSHLMQAGCDA-- 368 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHH-HHHHHHTTTTEEEEESCCHHHHHHHHHHCSE--
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEEeCCchHHHHHH-HHHHHhCCCcEEEecCCCHHHHHHHHhcCCE--
Confidence 477788888642 334444444444444677776654321 0101 112233457887 56773332 68999999
Q ss_pred eeec----CCcchHHHHHHcCCceeecccccchhHHHHHHHhhh---------cceeEecCCCCCccCHHHHHHHHHHHh
Q 012194 356 FLTH----CGWNSTMEALSLGVPMVAMPQWSDQSTNGKYIMDVW---------KMGLKVPADEKGIVRREAIAHCISEIL 422 (468)
Q Consensus 356 ~I~H----gG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~l~~~~---------g~G~~l~~~~~~~~~~~~l~~~i~~ll 422 (468)
+|.- |...++.||+++|+|+|+.... .....+ ..- +.|..++.. +.+++.++|.+++
T Consensus 369 ~v~pS~~E~~~~~~lEAma~G~PvI~s~~g----g~~e~v-~~~~~~~~~~~~~~G~l~~~~-----d~~~la~~i~~ll 438 (485)
T 1rzu_A 369 IIIPSRFEPCGLTQLYALRYGCIPVVARTG----GLADTV-IDANHAALASKAATGVQFSPV-----TLDGLKQAIRRTV 438 (485)
T ss_dssp EEECCSCCSSCSHHHHHHHHTCEEEEESSH----HHHHHC-CBCCHHHHHTTCCCBEEESSC-----SHHHHHHHHHHHH
T ss_pred EEECcccCCCCHHHHHHHHCCCCEEEeCCC----Chhhee-cccccccccccCCcceEeCCC-----CHHHHHHHHHHHH
Confidence 8742 4456899999999999997652 333333 220 257777754 8999999999999
Q ss_pred ---cCc
Q 012194 423 ---EGE 425 (468)
Q Consensus 423 ---~~~ 425 (468)
+|+
T Consensus 439 ~~~~~~ 444 (485)
T 1rzu_A 439 RYYHDP 444 (485)
T ss_dssp HHHTCH
T ss_pred HHhCCH
Confidence 675
No 42
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=98.86 E-value=1.8e-07 Score=97.69 Aligned_cols=143 Identities=13% Similarity=0.145 Sum_probs=87.5
Q ss_pred CceEEEEecCcCCCCHHHHHHHHHHHHhC-----CCeEEEEEeCCccCC-CC------cch---hhh--ccCCeEEEe--
Q 012194 280 GSVVYVSFGSYAPLKVEEMEELAWGLKAT-----NQYFLWVVRESEQAK-LP------ENF---SDE--TSQKGLVVN-- 340 (468)
Q Consensus 280 ~~~I~is~Gs~~~~~~~~~~~~~~a~~~~-----~~~~i~~~~~~~~~~-~~------~~~---~~~--~~~nv~~~~-- 340 (468)
+..+++..|.... ...+..+++|+..+ +.+++++.++..... .+ ..+ .++ +.++|.+.+
T Consensus 571 ~~~vIl~vGRl~~--~KGid~LIeA~~~L~~~~~~v~LvIvG~g~~~~~~~~e~~~~~~~L~~li~~lgL~~~V~flG~~ 648 (816)
T 3s28_A 571 KKPILFTMARLDR--VKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKAEMKKMYDLIEEYKLNGQFRWISSQ 648 (816)
T ss_dssp TSCEEEEECCCCT--TTTHHHHHHHHHHCHHHHHHCEEEEECCCTTSCCCCHHHHHHHHHHHHHHHHTTCBBBEEEECCC
T ss_pred CCeEEEEEccCcc--cCCHHHHHHHHHHHHhhCCCeEEEEEeCCCcccccchhhHHHHHHHHHHHHHcCCCCcEEEccCc
Confidence 3467778888763 23345555665544 345655544331000 00 011 111 348899987
Q ss_pred --ecchHHHhc----ccCcceeeec----CCcchHHHHHHcCCceeecccccchhHHHHHHHhhhcceeEecCCCCCccC
Q 012194 341 --WCPQLEVLA----HEAAGCFLTH----CGWNSTMEALSLGVPMVAMPQWSDQSTNGKYIMDVWKMGLKVPADEKGIVR 410 (468)
Q Consensus 341 --~vpq~~lL~----~~~~~~~I~H----gG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~l~~~~g~G~~l~~~~~~~~~ 410 (468)
++|+.++.. .+++ +|.- |-..++.||+++|+|+|+. |.......+..- +.|..++.. +
T Consensus 649 ~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV~dg-~~Gllv~p~-----D 716 (816)
T 3s28_A 649 MDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEIIVHG-KSGFHIDPY-----H 716 (816)
T ss_dssp CCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHCCBT-TTBEEECTT-----S
T ss_pred cccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHHccC-CcEEEeCCC-----C
Confidence 445455544 4677 7743 3456999999999999986 445566666667 789888865 8
Q ss_pred HHHHHHHHHHHh----cCcc-HHHHHHHHHH
Q 012194 411 REAIAHCISEIL----EGER-GKEIRQNAGK 436 (468)
Q Consensus 411 ~~~l~~~i~~ll----~~~~-~~~~~~~a~~ 436 (468)
++++.++|.+++ .|++ .+++.+++++
T Consensus 717 ~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~ 747 (816)
T 3s28_A 717 GDQAADTLADFFTKCKEDPSHWDEISKGGLQ 747 (816)
T ss_dssp HHHHHHHHHHHHHHHHHCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 999999997776 7762 2344444444
No 43
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=98.86 E-value=7.6e-07 Score=88.73 Aligned_cols=134 Identities=8% Similarity=0.021 Sum_probs=81.8
Q ss_pred CceEEEEecCcCC-CCHHHHHHHHHHHHhCCCeEEEEEeCCc--cCCCCcchhhhccCCeE-EEeecch--HHHhcccCc
Q 012194 280 GSVVYVSFGSYAP-LKVEEMEELAWGLKATNQYFLWVVRESE--QAKLPENFSDETSQKGL-VVNWCPQ--LEVLAHEAA 353 (468)
Q Consensus 280 ~~~I~is~Gs~~~-~~~~~~~~~~~a~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~nv~-~~~~vpq--~~lL~~~~~ 353 (468)
+..+++..|.... -..+.+...+..+.+.+.+++++..+.. ...+ ....+..+++|. +.++... ..+|+.+++
T Consensus 291 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~~~~~~~l-~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv 369 (485)
T 2qzs_A 291 KVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVLQEGF-LAAAAEYPGQVGVQIGYHEAFSHRIMGGADV 369 (485)
T ss_dssp TSCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEECHHHHHHH-HHHHHHSTTTEEEEESCCHHHHHHHHHHCSE
T ss_pred CCeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCchHHHHHH-HHHHHhCCCcEEEeCCCCHHHHHHHHHhCCE
Confidence 3467777787763 2334443434444444677776654321 0101 112223457886 6677433 278999999
Q ss_pred ceeeec----CCcchHHHHHHcCCceeecccccchhHHHHHHHhhh--------cceeEecCCCCCccCHHHHHHHHHHH
Q 012194 354 GCFLTH----CGWNSTMEALSLGVPMVAMPQWSDQSTNGKYIMDVW--------KMGLKVPADEKGIVRREAIAHCISEI 421 (468)
Q Consensus 354 ~~~I~H----gG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~l~~~~--------g~G~~l~~~~~~~~~~~~l~~~i~~l 421 (468)
+|.- |...++.||+++|+|+|+... ......+.... +.|..++.. +++++.++|.++
T Consensus 370 --~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~~~~~~~~~~~~~G~l~~~~-----d~~~la~~i~~l 438 (485)
T 2qzs_A 370 --ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSDCSLENLADGVASGFVFEDS-----NAWSLLRAIRRA 438 (485)
T ss_dssp --EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCBCCHHHHHTTCCCBEEECSS-----SHHHHHHHHHHH
T ss_pred --EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceeccCccccccccccceEEECCC-----CHHHHHHHHHHH
Confidence 7743 445688999999999999764 23333333210 257777754 899999999999
Q ss_pred h---cCc
Q 012194 422 L---EGE 425 (468)
Q Consensus 422 l---~~~ 425 (468)
+ +|+
T Consensus 439 l~~~~~~ 445 (485)
T 2qzs_A 439 FVLWSRP 445 (485)
T ss_dssp HHHHTSH
T ss_pred HHHcCCH
Confidence 9 675
No 44
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=98.78 E-value=3.5e-07 Score=89.11 Aligned_cols=131 Identities=7% Similarity=0.077 Sum_probs=80.6
Q ss_pred CceEEEEecCcCCCCHHHHHHHHHHHHh-----CCCeEEEEEeCCccCCC--Ccchhh---h--ccCC-------eEEEe
Q 012194 280 GSVVYVSFGSYAPLKVEEMEELAWGLKA-----TNQYFLWVVRESEQAKL--PENFSD---E--TSQK-------GLVVN 340 (468)
Q Consensus 280 ~~~I~is~Gs~~~~~~~~~~~~~~a~~~-----~~~~~i~~~~~~~~~~~--~~~~~~---~--~~~n-------v~~~~ 340 (468)
+..+++..|.... ......+++++.. .+.+++++..+...... .+.+.+ . +.++ +.+.+
T Consensus 183 ~~~~il~vGr~~~--~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~l~~~~~~~~~~~~l~~~v~~l~~vv~~~g 260 (413)
T 3oy2_A 183 DDVLFLNMNRNTA--RKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVASGVDNVFTHLNKIMINRT 260 (413)
T ss_dssp TSEEEECCSCSSG--GGTHHHHHHHHHHHHHHCTTCCEEEEEECCTTCSCCHHHHHHHHHHHHTCSCHHHHHTTEEEECS
T ss_pred CceEEEEcCCCch--hcCcHHHHHHHHHHHHhCCCcEEEEEeCCcccchhhHHHHHHHHHHHcCcccccccccceeeccC
Confidence 3477888888653 2223334444332 35677766654322110 011111 1 3344 66679
Q ss_pred ecchH---HHhcccCcceeee----cCCcchHHHHHHcCCceeecccccchhHHHHHHHhhhcc---------------e
Q 012194 341 WCPQL---EVLAHEAAGCFLT----HCGWNSTMEALSLGVPMVAMPQWSDQSTNGKYIMDVWKM---------------G 398 (468)
Q Consensus 341 ~vpq~---~lL~~~~~~~~I~----HgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~l~~~~g~---------------G 398 (468)
|+|+. .+|..+++ +|. -|...++.||+++|+|+|+... ......+... .. |
T Consensus 261 ~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v~~~-~~~~i~~~~~~~~~~~~G 333 (413)
T 3oy2_A 261 VLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYFSGD-CVYKIKPSAWISVDDRDG 333 (413)
T ss_dssp CCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHSCTT-TSEEECCCEEEECTTTCS
T ss_pred cCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHHccC-cccccccccccccccccC
Confidence 99954 78999999 774 2344589999999999998653 3444444433 22 6
Q ss_pred e--EecCCCCCccCHHHHHHHHHHHhcCc
Q 012194 399 L--KVPADEKGIVRREAIAHCISEILEGE 425 (468)
Q Consensus 399 ~--~l~~~~~~~~~~~~l~~~i~~ll~~~ 425 (468)
. .+... +.+++.++| ++++|+
T Consensus 334 ~~gl~~~~-----d~~~la~~i-~l~~~~ 356 (413)
T 3oy2_A 334 IGGIEGII-----DVDDLVEAF-TFFKDE 356 (413)
T ss_dssp SCCEEEEC-----CHHHHHHHH-HHTTSH
T ss_pred cceeeCCC-----CHHHHHHHH-HHhcCH
Confidence 5 66643 899999999 999986
No 45
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.77 E-value=4.5e-08 Score=83.48 Aligned_cols=139 Identities=12% Similarity=0.160 Sum_probs=94.8
Q ss_pred eEEEEecCcCCCCHHHHHHHHHHHHhC-CCeEEEEEeCCccCCCCcch---hhhccCCeEEEeecch---HHHhcccCcc
Q 012194 282 VVYVSFGSYAPLKVEEMEELAWGLKAT-NQYFLWVVRESEQAKLPENF---SDETSQKGLVVNWCPQ---LEVLAHEAAG 354 (468)
Q Consensus 282 ~I~is~Gs~~~~~~~~~~~~~~a~~~~-~~~~i~~~~~~~~~~~~~~~---~~~~~~nv~~~~~vpq---~~lL~~~~~~ 354 (468)
.+++..|+... ......+++++..+ +.+++++..+.....+.... ...+++||.+.+|+|+ ..++..+++
T Consensus 24 ~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~G~~~~~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~adi- 100 (177)
T 2f9f_A 24 DFWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIVGWFSKGDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCKG- 100 (177)
T ss_dssp SCEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEEBCCCTTSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCSE-
T ss_pred CEEEEEecccc--ccCHHHHHHHHHhCCCcEEEEEecCccHHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhCCE-
Confidence 45667788753 33456677777776 55666554333221111111 1124579999999997 489999999
Q ss_pred eeee---cCCcc-hHHHHHHcCCceeecccccchhHHHHHHHhhhcceeEecCCCCCccCHHHHHHHHHHHhcCccHHHH
Q 012194 355 CFLT---HCGWN-STMEALSLGVPMVAMPQWSDQSTNGKYIMDVWKMGLKVPADEKGIVRREAIAHCISEILEGERGKEI 430 (468)
Q Consensus 355 ~~I~---HgG~~-s~~Eal~~GvP~l~~P~~~DQ~~na~~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~ 430 (468)
+|. +.|++ ++.||+++|+|+|+.. ...+...++.. +.|..+ .. +.+++.++|.++++|++ .+
T Consensus 101 -~v~ps~~e~~~~~~~Eama~G~PvI~~~----~~~~~e~i~~~-~~g~~~-~~-----d~~~l~~~i~~l~~~~~--~~ 166 (177)
T 2f9f_A 101 -LLCTAKDEDFGLTPIEAMASGKPVIAVN----EGGFKETVINE-KTGYLV-NA-----DVNEIIDAMKKVSKNPD--KF 166 (177)
T ss_dssp -EEECCSSCCSCHHHHHHHHTTCCEEEES----SHHHHHHCCBT-TTEEEE-CS-----CHHHHHHHHHHHHHCTT--TT
T ss_pred -EEeCCCcCCCChHHHHHHHcCCcEEEeC----CCCHHHHhcCC-CccEEe-CC-----CHHHHHHHHHHHHhCHH--HH
Confidence 776 34444 9999999999999875 35666677777 788887 54 89999999999998862 23
Q ss_pred HHHHHHH
Q 012194 431 RQNAGKW 437 (468)
Q Consensus 431 ~~~a~~~ 437 (468)
++++++.
T Consensus 167 ~~~~~~~ 173 (177)
T 2f9f_A 167 KKDCFRR 173 (177)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4544443
No 46
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=98.55 E-value=6.6e-06 Score=78.92 Aligned_cols=99 Identities=12% Similarity=0.198 Sum_probs=75.1
Q ss_pred CCeEEEeecchH-HHhcccCcceeeec-----CCcchHHHHHHcCCceeecccccchhHHHHHHHhhhcceeEecCCCCC
Q 012194 334 QKGLVVNWCPQL-EVLAHEAAGCFLTH-----CGWNSTMEALSLGVPMVAMPQWSDQSTNGKYIMDVWKMGLKVPADEKG 407 (468)
Q Consensus 334 ~nv~~~~~vpq~-~lL~~~~~~~~I~H-----gG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~l~~~~g~G~~l~~~~~~ 407 (468)
.++.+.++..+. .+++.+|+ ++.- +|..+++||+++|+|+|+-|...+.......+.+. |.++...
T Consensus 260 ~~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~~-G~l~~~~----- 331 (374)
T 2xci_A 260 GDVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEKE-GAGFEVK----- 331 (374)
T ss_dssp SSEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHHT-TCEEECC-----
T ss_pred CcEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHHC-CCEEEeC-----
Confidence 356676766554 89999998 7652 24578999999999999877777777777766677 7766553
Q ss_pred ccCHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH
Q 012194 408 IVRREAIAHCISEILEGERGKEIRQNAGKWSNFAK 442 (468)
Q Consensus 408 ~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~ 442 (468)
++++|.+++.++++|+..++|.+++++..+.-.
T Consensus 332 --d~~~La~ai~~ll~d~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 332 --NETELVTKLTELLSVKKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp --SHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcc
Confidence 789999999999987223678888888766554
No 47
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=98.23 E-value=5.7e-06 Score=69.24 Aligned_cols=142 Identities=14% Similarity=0.216 Sum_probs=84.8
Q ss_pred ceEEEEecCcCCCCHHHHHHHHHHHHhCC----CeEEEEEeCCccCCCCcchhhhccCCeEEEeecchH---HHhcccCc
Q 012194 281 SVVYVSFGSYAPLKVEEMEELAWGLKATN----QYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQL---EVLAHEAA 353 (468)
Q Consensus 281 ~~I~is~Gs~~~~~~~~~~~~~~a~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~---~lL~~~~~ 353 (468)
+++++..|+... ......+++++..+. .+++++..+.....+ ....++.+.++.+ +|+|+. .++..+++
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~~~~~-~~~~~~~~~~v~~-g~~~~~~~~~~~~~adv 77 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGKGPDEKKI-KLLAQKLGVKAEF-GFVNSNELLEILKTCTL 77 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECCSTTHHHH-HHHHHHHTCEEEC-CCCCHHHHHHHHTTCSE
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeCCccHHHH-HHHHHHcCCeEEE-eecCHHHHHHHHHhCCE
Confidence 467888888753 234556666666552 344433222111101 1122234457888 999864 78999999
Q ss_pred ceeee----cCCcchHHHHHHcCC-ceeecccccchhHHHHHHHhhhcceeEecCCCCCccCHHHHHHHHHHHhcCcc-H
Q 012194 354 GCFLT----HCGWNSTMEALSLGV-PMVAMPQWSDQSTNGKYIMDVWKMGLKVPADEKGIVRREAIAHCISEILEGER-G 427 (468)
Q Consensus 354 ~~~I~----HgG~~s~~Eal~~Gv-P~l~~P~~~DQ~~na~~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~-~ 427 (468)
+|. -|...++.||+++|+ |+|+.... ......+... +. .+... +.+++.++|.++++|++ .
T Consensus 78 --~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~---~~~~~~~~~~-~~--~~~~~-----~~~~l~~~i~~l~~~~~~~ 144 (166)
T 3qhp_A 78 --YVHAANVESEAIACLEAISVGIVPVIANSPL---SATRQFALDE-RS--LFEPN-----NAKDLSAKIDWWLENKLER 144 (166)
T ss_dssp --EEECCCSCCCCHHHHHHHHTTCCEEEECCTT---CGGGGGCSSG-GG--EECTT-----CHHHHHHHHHHHHHCHHHH
T ss_pred --EEECCcccCccHHHHHHHhcCCCcEEeeCCC---CchhhhccCC-ce--EEcCC-----CHHHHHHHHHHHHhCHHHH
Confidence 775 244569999999996 99993321 1122222233 33 44433 89999999999999863 2
Q ss_pred HHHHHHHHHHHH
Q 012194 428 KEIRQNAGKWSN 439 (468)
Q Consensus 428 ~~~~~~a~~~~~ 439 (468)
+++.+++++..+
T Consensus 145 ~~~~~~~~~~~~ 156 (166)
T 3qhp_A 145 ERMQNEYAKSAL 156 (166)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 445555555443
No 48
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=98.19 E-value=0.00019 Score=72.07 Aligned_cols=137 Identities=9% Similarity=0.042 Sum_probs=81.8
Q ss_pred CceEEEEecCcCC-CCHHHHHHHHHHHHhCCCeEEEEEeCCccC-CCCcchhhhccCCeEEEeecchH---HHhcccCcc
Q 012194 280 GSVVYVSFGSYAP-LKVEEMEELAWGLKATNQYFLWVVRESEQA-KLPENFSDETSQKGLVVNWCPQL---EVLAHEAAG 354 (468)
Q Consensus 280 ~~~I~is~Gs~~~-~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~nv~~~~~vpq~---~lL~~~~~~ 354 (468)
+.++++..|.... -..+.+...+..+.+.+.++++...+.... ..-.......++++.+....+.. .+++.+++
T Consensus 326 ~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~- 404 (536)
T 3vue_A 326 KIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADV- 404 (536)
T ss_dssp TSCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHCSE-
T ss_pred CCcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCchHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhhhe-
Confidence 4456777788763 233444444444445566776655433110 00011223467889898877764 68899999
Q ss_pred eeeecC---C-cchHHHHHHcCCceeecccccchhHHHHHHHhhhcceeEecCC-CCC----ccCHHHHHHHHHHHhc
Q 012194 355 CFLTHC---G-WNSTMEALSLGVPMVAMPQWSDQSTNGKYIMDVWKMGLKVPAD-EKG----IVRREAIAHCISEILE 423 (468)
Q Consensus 355 ~~I~Hg---G-~~s~~Eal~~GvP~l~~P~~~DQ~~na~~l~~~~g~G~~l~~~-~~~----~~~~~~l~~~i~~ll~ 423 (468)
||.=. | ..+++||+++|+|+|+... ......|..- .-|...... .++ ..++++|.++|+++|.
T Consensus 405 -~v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V~dg-~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~ 476 (536)
T 3vue_A 405 -LAVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTVIEG-KTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIK 476 (536)
T ss_dssp -EEECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHCCBT-TTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHH
T ss_pred -eecccccCCCCHHHHHHHHcCCCEEEcCC----CCchheeeCC-CCccccccCCCceeEECCCCHHHHHHHHHHHHH
Confidence 88532 3 3488999999999998654 3455555554 455533221 000 2367889999988774
No 49
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=98.15 E-value=2.6e-05 Score=67.37 Aligned_cols=140 Identities=16% Similarity=0.169 Sum_probs=87.3
Q ss_pred eEEEEecCcC-CC-CHHHHHHHHHHHH--hC--CCeEEEEEeCC--ccCCCCcchhhhccCCeEE-EeecchH---HHhc
Q 012194 282 VVYVSFGSYA-PL-KVEEMEELAWGLK--AT--NQYFLWVVRES--EQAKLPENFSDETSQKGLV-VNWCPQL---EVLA 349 (468)
Q Consensus 282 ~I~is~Gs~~-~~-~~~~~~~~~~a~~--~~--~~~~i~~~~~~--~~~~~~~~~~~~~~~nv~~-~~~vpq~---~lL~ 349 (468)
.+++..|+.. .. ..+.+...+..+. +. +.+++++..+. ....+ ....++.+ ||.+ .+++++. .++.
T Consensus 37 ~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l~i~G~~~~~~~~~l-~~~~~~~~-~v~~~~g~~~~~~~~~~~~ 114 (200)
T 2bfw_A 37 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWA-RSLEEKHG-NVKVITEMLSREFVRELYG 114 (200)
T ss_dssp EEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHH-HHHHHHCT-TEEEECSCCCHHHHHHHHT
T ss_pred CEEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEEEEECCCChHHHHHH-HHHHHhcC-CEEEEeccCCHHHHHHHHH
Confidence 4667788876 32 3444444444442 21 34554443221 00001 11122233 8999 9999943 8899
Q ss_pred ccCcceeeecC---C-cchHHHHHHcCCceeecccccchhHHHHHHHhhhcceeEecCCCCCccCHHHHHHHHHHHhc-C
Q 012194 350 HEAAGCFLTHC---G-WNSTMEALSLGVPMVAMPQWSDQSTNGKYIMDVWKMGLKVPADEKGIVRREAIAHCISEILE-G 424 (468)
Q Consensus 350 ~~~~~~~I~Hg---G-~~s~~Eal~~GvP~l~~P~~~DQ~~na~~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~-~ 424 (468)
.+++ +|.-. | ..++.||+++|+|+|+... ......+ .. +.|..++.. +.+++.++|.++++ |
T Consensus 115 ~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~~-~~g~~~~~~-----~~~~l~~~i~~l~~~~ 181 (200)
T 2bfw_A 115 SVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVKAG-----DPGELANAILKALELS 181 (200)
T ss_dssp TCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-CT-TTCEEECTT-----CHHHHHHHHHHHHHCC
T ss_pred HCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-CC-CceEEecCC-----CHHHHHHHHHHHHhcC
Confidence 9999 77533 2 4688999999999988754 3555556 66 778888754 89999999999999 8
Q ss_pred cc-HHHHHHHHHH
Q 012194 425 ER-GKEIRQNAGK 436 (468)
Q Consensus 425 ~~-~~~~~~~a~~ 436 (468)
++ .+++.+++++
T Consensus 182 ~~~~~~~~~~a~~ 194 (200)
T 2bfw_A 182 RSDLSKFRENCKK 194 (200)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 62 1334444443
No 50
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=98.01 E-value=8.1e-05 Score=74.39 Aligned_cols=134 Identities=9% Similarity=0.037 Sum_probs=94.7
Q ss_pred ceEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEE--eCCccCCCCcchh-----hhccCCeEEEeecchHH---Hhcc
Q 012194 281 SVVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVV--RESEQAKLPENFS-----DETSQKGLVVNWCPQLE---VLAH 350 (468)
Q Consensus 281 ~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~--~~~~~~~~~~~~~-----~~~~~nv~~~~~vpq~~---lL~~ 350 (468)
.++|.+|+......++.++...+.+++.+..++|.. +.. .. ...... ..+.+++++.+.+|+.+ .+..
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~-~g-~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~ 518 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQS-NG-ITHPYVERFIKSYLGDSATAHPHSPYHQYLRILHN 518 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSC-CG-GGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHT
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCC-ch-hhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhc
Confidence 589999999888889999999999999888777643 321 10 111111 12447888999998764 5588
Q ss_pred cCcceeee---cCCcchHHHHHHcCCceeeccccc-chhHHHHHHHhhhcceeE-ecCCCCCccCHHHHHHHHHHHhcCc
Q 012194 351 EAAGCFLT---HCGWNSTMEALSLGVPMVAMPQWS-DQSTNGKYIMDVWKMGLK-VPADEKGIVRREAIAHCISEILEGE 425 (468)
Q Consensus 351 ~~~~~~I~---HgG~~s~~Eal~~GvP~l~~P~~~-DQ~~na~~l~~~~g~G~~-l~~~~~~~~~~~~l~~~i~~ll~~~ 425 (468)
+|+ ++. .+|..|++|||++|||+|.++-.. -...-+..+... |+... +. -+.++..+...++.+|+
T Consensus 519 aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~~-GLpE~LIA------~d~eeYv~~Av~La~D~ 589 (631)
T 3q3e_A 519 CDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKRL-GLPEWLIA------NTVDEYVERAVRLAENH 589 (631)
T ss_dssp CSE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHHT-TCCGGGEE------SSHHHHHHHHHHHHHCH
T ss_pred CcE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHhc-CCCcceec------CCHHHHHHHHHHHhCCH
Confidence 888 653 388899999999999999987432 223334455667 77653 33 26888888888999996
No 51
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=97.88 E-value=0.001 Score=62.72 Aligned_cols=103 Identities=12% Similarity=0.010 Sum_probs=68.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCccccccccCCCCCCCCe-EEEEcCCCCCCCCCCccccHHHH
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHK--GLKVTLVTTYFISKSLHRDSSSSSASI-ALEAISDGYDQGGSAQAESIEAY 90 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~i-~f~~~~~~~~~~~~~~~~~~~~~ 90 (468)
|||+++...+.|++.-...+.+.|+++ |.+|++++.+.+.+.++.. +.+ +++.++. .. . ..
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~~~-----p~i~~v~~~~~--~~-~---~~----- 64 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLSRM-----PEVNEAIPMPL--GH-G---AL----- 64 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHTTC-----TTEEEEEEC------------------
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC-----CccCEEEEecC--Cc-c---cc-----
Confidence 699999998889999999999999987 9999999998887766622 234 3444431 11 0 00
Q ss_pred HHHHHHhchHHHHHHHHHhcCCCCCccEEEeCCCcchHHHHHHHcCCceEE
Q 012194 91 LEKFWQIGPRSLCELVEKMNGSVVPVDCIVYDSFLPWALDVAKKFGLVGAA 141 (468)
Q Consensus 91 ~~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~~~~~~~~~A~~lgiP~i~ 141 (468)
....+..+...+.+. +||++|.-........++...|+|..+
T Consensus 65 -------~~~~~~~l~~~l~~~--~~D~vid~~~~~~sa~~~~~~~~~~~i 106 (348)
T 1psw_A 65 -------EIGERRKLGHSLREK--RYDRAYVLPNSFKSALVPLFAGIPHRT 106 (348)
T ss_dssp -------CHHHHHHHHHHTTTT--TCSEEEECSCCSGGGHHHHHTTCSEEE
T ss_pred -------chHHHHHHHHHHHhc--CCCEEEECCCChHHHHHHHHhCCCEEe
Confidence 111234555666543 479999322234456778888999744
No 52
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=97.82 E-value=0.0017 Score=61.37 Aligned_cols=106 Identities=13% Similarity=0.059 Sum_probs=73.0
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCccccccccCCCCCCCCeE-EEEcCCCCCCCCCCccccH
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHK--GLKVTLVTTYFISKSLHRDSSSSSASIA-LEAISDGYDQGGSAQAESI 87 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~i~-f~~~~~~~~~~~~~~~~~~ 87 (468)
...+|||++-..+.|++.-+..+.+.|+++ +.+|++++.+.+.+.++.. +.+. ++.++.. ..
T Consensus 6 l~~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~~~-----p~vd~vi~~~~~----------~~ 70 (349)
T 3tov_A 6 LDYKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVMEYN-----PNIDELIVVDKK----------GR 70 (349)
T ss_dssp CTTCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTSSC-----TTCSEEEEECCS----------SH
T ss_pred CCCCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHhcC-----CCccEEEEeCcc----------cc
Confidence 446899999999999999999999999987 9999999999998888732 3343 5555421 00
Q ss_pred HHHHHHHHHhchHHHHHHHHHhcCCCCCc-cEEEeCCCcchHHHHHHHcCCceEE
Q 012194 88 EAYLEKFWQIGPRSLCELVEKMNGSVVPV-DCIVYDSFLPWALDVAKKFGLVGAA 141 (468)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~l~~l~~~~~p~-DlVI~D~~~~~~~~~A~~lgiP~i~ 141 (468)
. ..+. .+..++.++++. +| |++|.=....-...++...|+|..+
T Consensus 71 ~---~~~~-----~~~~l~~~Lr~~--~y~D~vidl~~~~rs~~l~~~~~a~~ri 115 (349)
T 3tov_A 71 H---NSIS-----GLNEVAREINAK--GKTDIVINLHPNERTSYLAWKIHAPITT 115 (349)
T ss_dssp H---HHHH-----HHHHHHHHHHHH--CCCCEEEECCCSHHHHHHHHHHCCSEEE
T ss_pred c---ccHH-----HHHHHHHHHhhC--CCCeEEEECCCChHHHHHHHHhCCCeEE
Confidence 1 1111 122334444432 48 9999665555566788889999754
No 53
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.80 E-value=0.00064 Score=70.67 Aligned_cols=137 Identities=16% Similarity=0.191 Sum_probs=100.2
Q ss_pred CCCceEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhh------ccCCeEEEeecchH---HHh
Q 012194 278 AKGSVVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDE------TSQKGLVVNWCPQL---EVL 348 (468)
Q Consensus 278 ~~~~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~------~~~nv~~~~~vpq~---~lL 348 (468)
+.+.+||.+|......+++.+..-.+.|++.+.-.+|........ ..++.+. -++++++.+..|.. ..+
T Consensus 520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~--~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~ 597 (723)
T 4gyw_A 520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVG--EPNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRG 597 (723)
T ss_dssp CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGG--HHHHHHHHHHTTCCGGGEEEEECCCHHHHHHHG
T ss_pred CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHH--HHHHHHHHHhcCCCcCeEEECCCCCHHHHHHHh
Confidence 456699999999888999999999999999999889888654221 1111111 24788898988865 455
Q ss_pred cccCcceeee---cCCcchHHHHHHcCCceeeccc-ccchhHHHHHHHhhhcceeEecCCCCCccCHHHHHHHHHHHhcC
Q 012194 349 AHEAAGCFLT---HCGWNSTMEALSLGVPMVAMPQ-WSDQSTNGKYIMDVWKMGLKVPADEKGIVRREAIAHCISEILEG 424 (468)
Q Consensus 349 ~~~~~~~~I~---HgG~~s~~Eal~~GvP~l~~P~-~~DQ~~na~~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~ 424 (468)
..+|+ ++- .+|.+|++|||+.|||+|.++= ..=...-+..+..+ |+...+.. +.++-.+.-.++-+|
T Consensus 598 ~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~g~~~~sR~~~s~l~~~-gl~e~ia~------~~~~Y~~~a~~la~d 668 (723)
T 4gyw_A 598 QLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMPGETLASRVAASQLTCL-GCLELIAK------NRQEYEDIAVKLGTD 668 (723)
T ss_dssp GGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGTHHHHHHHHH-TCGGGBCS------SHHHHHHHHHHHHHC
T ss_pred CCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEccCCCccHhHHHHHHHHc-CCcccccC------CHHHHHHHHHHHhcC
Confidence 67777 765 8999999999999999999983 22334556677777 88876653 555555555577777
Q ss_pred c
Q 012194 425 E 425 (468)
Q Consensus 425 ~ 425 (468)
+
T Consensus 669 ~ 669 (723)
T 4gyw_A 669 L 669 (723)
T ss_dssp H
T ss_pred H
Confidence 5
No 54
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.79 E-value=0.00048 Score=69.82 Aligned_cols=83 Identities=14% Similarity=0.131 Sum_probs=63.7
Q ss_pred CCeEEEeecchH---HHhcccCcceeee---cCCcchHHHHHHcCCceeecccccc-hhHHHHHHHhhhcceeEecCCCC
Q 012194 334 QKGLVVNWCPQL---EVLAHEAAGCFLT---HCGWNSTMEALSLGVPMVAMPQWSD-QSTNGKYIMDVWKMGLKVPADEK 406 (468)
Q Consensus 334 ~nv~~~~~vpq~---~lL~~~~~~~~I~---HgG~~s~~Eal~~GvP~l~~P~~~D-Q~~na~~l~~~~g~G~~l~~~~~ 406 (468)
++|.+.+++|+. .++..+|+ ||. .|+.+++.||+++|+|+|++|-..= -..-+..+... |+...+.
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~~-g~~e~v~---- 506 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHHL-GLDEMNV---- 506 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHHH-TCGGGBC----
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHHC-CChhhhc----
Confidence 789999999853 77999999 872 3667799999999999999774311 11224566777 7776654
Q ss_pred CccCHHHHHHHHHHHhcCc
Q 012194 407 GIVRREAIAHCISEILEGE 425 (468)
Q Consensus 407 ~~~~~~~l~~~i~~ll~~~ 425 (468)
. +++++.+++.++++|+
T Consensus 507 -~-~~~~la~~i~~l~~~~ 523 (568)
T 2vsy_A 507 -A-DDAAFVAKAVALASDP 523 (568)
T ss_dssp -S-SHHHHHHHHHHHHHCH
T ss_pred -C-CHHHHHHHHHHHhcCH
Confidence 2 8899999999999996
No 55
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=97.63 E-value=0.00023 Score=66.85 Aligned_cols=148 Identities=11% Similarity=0.067 Sum_probs=97.3
Q ss_pred ceEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEEeecchHHH---hcccCcceee
Q 012194 281 SVVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQLEV---LAHEAAGCFL 357 (468)
Q Consensus 281 ~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~l---L~~~~~~~~I 357 (468)
..+++-.|++... .. +..+ ..+.+++++..+.. . ..+ ||.+.+|+|+.++ |..++.+++.
T Consensus 178 ~~~i~yaG~l~k~--~~----L~~l-~~~~~f~ivG~G~~-~--------~l~-nV~f~G~~~~~el~~~l~~~~~~lv~ 240 (339)
T 3rhz_A 178 KREIHFPGNPERF--SF----VKEW-KYDIPLKVYTWQNV-E--------LPQ-NVHKINYRPDEQLLMEMSQGGFGLVW 240 (339)
T ss_dssp EEEEEECSCTTTC--GG----GGGC-CCSSCEEEEESCCC-C--------CCT-TEEEEECCCHHHHHHHHHTEEEEECC
T ss_pred CcEEEEeCCcchh--hH----HHhC-CCCCeEEEEeCCcc-c--------CcC-CEEEeCCCCHHHHHHHHHhCCEEEEE
Confidence 3566777888731 11 1111 23556655543321 1 134 8999999998754 5566665555
Q ss_pred ecCCc---------chHHHHHHcCCceeecccccchhHHHHHHHhhhcceeEecCCCCCccCHHHHHHHHHHHhcCccHH
Q 012194 358 THCGW---------NSTMEALSLGVPMVAMPQWSDQSTNGKYIMDVWKMGLKVPADEKGIVRREAIAHCISEILEGERGK 428 (468)
Q Consensus 358 ~HgG~---------~s~~Eal~~GvP~l~~P~~~DQ~~na~~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~ 428 (468)
+-+.. +-+.|++++|+|+|+.+ ...++..+++. |+|...+ +.+++.+++..+.. ++.+
T Consensus 241 ~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~~-~~G~~~~-------~~~e~~~~i~~l~~-~~~~ 307 (339)
T 3rhz_A 241 MDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIENN-GLGWIVK-------DVEEAIMKVKNVNE-DEYI 307 (339)
T ss_dssp CCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHHH-TCEEEES-------SHHHHHHHHHHCCH-HHHH
T ss_pred CCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHhC-CeEEEeC-------CHHHHHHHHHHhCH-HHHH
Confidence 33322 35789999999999755 56788899999 9999886 46788888887643 3456
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Q 012194 429 EIRQNAGKWSNFAKEAVAKGGSSDKNIDDFVANL 462 (468)
Q Consensus 429 ~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~l 462 (468)
+|++|+++.++.+++ |--..+++.+.+.+|
T Consensus 308 ~m~~na~~~a~~~~~----~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 308 ELVKNVRSFNPILRK----GFFTRRLLTESVFQA 337 (339)
T ss_dssp HHHHHHHHHTHHHHT----THHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhc----cHHHHHHHHHHHHHh
Confidence 899999999888874 233344555544433
No 56
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=97.07 E-value=0.00073 Score=65.46 Aligned_cols=80 Identities=10% Similarity=0.004 Sum_probs=60.2
Q ss_pred cCCeEEEeecchH---HHhcccCcceeeecC---Cc-chHHHHHHcCCceeecccccchhHHHHHHHhhhcceeEecCCC
Q 012194 333 SQKGLVVNWCPQL---EVLAHEAAGCFLTHC---GW-NSTMEALSLGVPMVAMPQWSDQSTNGKYIMDVWKMGLKVPADE 405 (468)
Q Consensus 333 ~~nv~~~~~vpq~---~lL~~~~~~~~I~Hg---G~-~s~~Eal~~GvP~l~~P~~~DQ~~na~~l~~~~g~G~~l~~~~ 405 (468)
.++|.+.+++|+. .+++.+++ ||.-. |. .++.||+++|+|+|+ -..+ ....++.- ..|..++..
T Consensus 294 ~~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~~-~~G~lv~~~- 364 (413)
T 2x0d_A 294 GIHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNWH-SNIVSLEQL- 364 (413)
T ss_dssp TEEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGTB-TTEEEESSC-
T ss_pred cCcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhcC-CCEEEeCCC-
Confidence 4678999999865 78999999 77532 33 467999999999998 3221 22344444 578888755
Q ss_pred CCccCHHHHHHHHHHHhcCc
Q 012194 406 KGIVRREAIAHCISEILEGE 425 (468)
Q Consensus 406 ~~~~~~~~l~~~i~~ll~~~ 425 (468)
+++++.++|.++++|+
T Consensus 365 ----d~~~la~ai~~ll~~~ 380 (413)
T 2x0d_A 365 ----NPENIAETLVELCMSF 380 (413)
T ss_dssp ----SHHHHHHHHHHHHHHT
T ss_pred ----CHHHHHHHHHHHHcCH
Confidence 8999999999999986
No 57
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=96.94 E-value=0.014 Score=54.24 Aligned_cols=133 Identities=13% Similarity=0.031 Sum_probs=79.4
Q ss_pred CCceEEEEecCcC---CCCHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEEee--cch-HHHhcccC
Q 012194 279 KGSVVYVSFGSYA---PLKVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVVNW--CPQ-LEVLAHEA 352 (468)
Q Consensus 279 ~~~~I~is~Gs~~---~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~--vpq-~~lL~~~~ 352 (468)
.++.|.+..|+.. .++.+.+.++++.+.+.+.++++..++.........+.+..+ ++.+.+. +.+ .+++++|+
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e~~~~~~i~~~~~-~~~l~g~~sl~el~ali~~a~ 255 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAEGFA-YVEVLPKMSLEGVARVLAGAK 255 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHHHHHHHHHHTTCT-TEEECCCCCHHHHHHHHHTCS
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHHHHHHHHHHhhCC-cccccCCCCHHHHHHHHHhCC
Confidence 4568888888765 467888888888887778887665443322111112221222 3434332 334 39999999
Q ss_pred cceeeecCCcchHHHHHHcCCceeec--ccccchhHHHHHHHhhhcce-eEe-----cCCCCCccCHHHHHHHHHHHhcC
Q 012194 353 AGCFLTHCGWNSTMEALSLGVPMVAM--PQWSDQSTNGKYIMDVWKMG-LKV-----PADEKGIVRREAIAHCISEILEG 424 (468)
Q Consensus 353 ~~~~I~HgG~~s~~Eal~~GvP~l~~--P~~~DQ~~na~~l~~~~g~G-~~l-----~~~~~~~~~~~~l~~~i~~ll~~ 424 (468)
+ +|+.= .|+++=|.+.|+|+|++ |..... ++- . |-. ..+ ..+ .++++++.+++.++|++
T Consensus 256 l--~I~~D-SG~~HlAaa~g~P~v~lfg~t~p~~--~~P----~-~~~~~~~~~~~~cm~---~I~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 256 F--VVSVD-TGLSHLTAALDRPNITVYGPTDPGL--IGG----Y-GKNQMVCRAPGNELS---QLTANAVKQFIEENAEK 322 (326)
T ss_dssp E--EEEES-SHHHHHHHHTTCCEEEEESSSCHHH--HCC----C-SSSEEEEECGGGCGG---GCCHHHHHHHHHHTTTT
T ss_pred E--EEecC-CcHHHHHHHcCCCEEEEECCCChhh--cCC----C-CCCceEecCCccccc---CCCHHHHHHHHHHHHHH
Confidence 9 99992 34444466799999987 422111 100 0 111 111 122 78999999999999976
Q ss_pred c
Q 012194 425 E 425 (468)
Q Consensus 425 ~ 425 (468)
.
T Consensus 323 ~ 323 (326)
T 2gt1_A 323 A 323 (326)
T ss_dssp C
T ss_pred h
Confidence 3
No 58
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=93.22 E-value=1.4 Score=36.37 Aligned_cols=135 Identities=14% Similarity=0.108 Sum_probs=73.7
Q ss_pred hhHhHhhhcCCCCceEEEEecC-cCCCCHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEEeecchH-
Q 012194 268 ESCIKWLNDRAKGSVVYVSFGS-YAPLKVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQL- 345 (468)
Q Consensus 268 ~~~~~~l~~~~~~~~I~is~Gs-~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~- 345 (468)
.++-++|...+ ..+||-|. .. ......++..+.+-++|-+++.. ....+.... +...+++..+..
T Consensus 35 ~~lg~~La~~g---~~lVsGGg~~G-----im~aa~~gAl~~gG~tigVlP~~-~~~~~~~~~----~~~i~~~~~~~Rk 101 (176)
T 2iz6_A 35 NELGKQIATHG---WILLTGGRSLG-----VMHEAMKGAKEAGGTTIGVLPGP-DTSEISDAV----DIPIVTGLGSARD 101 (176)
T ss_dssp HHHHHHHHHTT---CEEEEECSSSS-----HHHHHHHHHHHTTCCEEEEECC------CCTTC----SEEEECCCCSSSC
T ss_pred HHHHHHHHHCC---CEEEECCCccC-----HhHHHHHHHHHcCCEEEEEeCch-hhhhhccCC----ceeEEcCCHHHHH
Confidence 34456666543 66667666 43 34455555556666777666533 112222211 224455666754
Q ss_pred HHhcccCcceeeecCCcchHHHH---HHcCCceeecccccchhHHHHHHHhhhcceeEecCCCCCccCHHHHHHHHHHHh
Q 012194 346 EVLAHEAAGCFLTHCGWNSTMEA---LSLGVPMVAMPQWSDQSTNGKYIMDVWKMGLKVPADEKGIVRREAIAHCISEIL 422 (468)
Q Consensus 346 ~lL~~~~~~~~I~HgG~~s~~Ea---l~~GvP~l~~P~~~DQ~~na~~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll 422 (468)
.++..-+-..++--||.||+.|+ +.+++|++++|.+. .....+... ........+ +++++.+.+.+.+
T Consensus 102 ~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~~---~~~gfi~~~-~~~~i~~~~-----~~~e~~~~l~~~~ 172 (176)
T 2iz6_A 102 NINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQP---EAEKFFTSL-DAGLVHVAA-----DVAGAIAAVKQLL 172 (176)
T ss_dssp CCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCCH---HHHHHHHHH-CTTTEEEES-----SHHHHHHHHHHHH
T ss_pred HHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCcc---cccccCChh-hcCeEEEcC-----CHHHHHHHHHHHH
Confidence 44443333456677999986655 67999999999843 111222222 223233322 7888877777765
Q ss_pred cC
Q 012194 423 EG 424 (468)
Q Consensus 423 ~~ 424 (468)
.+
T Consensus 173 ~~ 174 (176)
T 2iz6_A 173 AK 174 (176)
T ss_dssp HC
T ss_pred Hh
Confidence 43
No 59
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=91.65 E-value=1.5 Score=42.96 Aligned_cols=109 Identities=12% Similarity=0.047 Sum_probs=68.8
Q ss_pred eEE-EeecchH---HHhcccCcceeeec---CCcc-hHHHHHHcCC-----ceeecccccchhHHHHHHHhhhcceeEec
Q 012194 336 GLV-VNWCPQL---EVLAHEAAGCFLTH---CGWN-STMEALSLGV-----PMVAMPQWSDQSTNGKYIMDVWKMGLKVP 402 (468)
Q Consensus 336 v~~-~~~vpq~---~lL~~~~~~~~I~H---gG~~-s~~Eal~~Gv-----P~l~~P~~~DQ~~na~~l~~~~g~G~~l~ 402 (468)
|.+ .+++++. .++..+|+ ||.- =|+| ++.||+++|+ |+|+--+.+ .+..+ .-|+.++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~~l----~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AANEL----TSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGGTC----TTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHHHh----CCeEEEC
Confidence 554 4788865 67889999 7753 3555 8899999998 666644332 11111 2367777
Q ss_pred CCCCCccCHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHhc
Q 012194 403 ADEKGIVRREAIAHCISEILEGERGKEIRQNAGKWSNFAKEAVAKGGSSDKNIDDFVANLISS 465 (468)
Q Consensus 403 ~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~ 465 (468)
+. +.+++.++|.++|+++. ++-++..++..+..++ -+.....+.+++.|.+.
T Consensus 403 p~-----d~~~lA~ai~~lL~~~~-~~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 403 PY-----DRDEVAAALDRALTMSL-AERISRHAEMLDVIVK-----NDINHWQECFISDLKQI 454 (482)
T ss_dssp TT-----CHHHHHHHHHHHHTCCH-HHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHS
T ss_pred CC-----CHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHhc
Confidence 55 89999999999998641 1223333333333332 35566777777777643
No 60
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=91.63 E-value=1.2 Score=43.60 Aligned_cols=110 Identities=13% Similarity=0.036 Sum_probs=73.5
Q ss_pred CeEEEeecchH---HHhcccCcceeee---cCCcch-HHHHHHcC---CceeecccccchhHHHHHHHhhhcceeEecCC
Q 012194 335 KGLVVNWCPQL---EVLAHEAAGCFLT---HCGWNS-TMEALSLG---VPMVAMPQWSDQSTNGKYIMDVWKMGLKVPAD 404 (468)
Q Consensus 335 nv~~~~~vpq~---~lL~~~~~~~~I~---HgG~~s-~~Eal~~G---vP~l~~P~~~DQ~~na~~l~~~~g~G~~l~~~ 404 (468)
.|++...+|+. .++..+++ ++. +=|+|. ..||+++| .|+|+--+.+ .+..+.. -|+.+++.
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~~---~allVnP~ 423 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLGE---YCRSVNPF 423 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHGG---GSEEECTT
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhCC---CEEEECCC
Confidence 57778888864 77888999 764 458884 68999996 5665544332 2333322 37888865
Q ss_pred CCCccCHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHh
Q 012194 405 EKGIVRREAIAHCISEILEGERGKEIRQNAGKWSNFAKEAVAKGGSSDKNIDDFVANLIS 464 (468)
Q Consensus 405 ~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~ 464 (468)
+.+++.++|.++|+++. ++-+++.+++.+.+. .-....-.++|+++|.+
T Consensus 424 -----D~~~lA~AI~~aL~m~~-~er~~r~~~~~~~V~-----~~d~~~W~~~fl~~L~~ 472 (496)
T 3t5t_A 424 -----DLVEQAEAISAALAAGP-RQRAEAAARRRDAAR-----PWTLEAWVQAQLDGLAA 472 (496)
T ss_dssp -----BHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHT-----TCBHHHHHHHHHHHHHH
T ss_pred -----CHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHH-----HCCHHHHHHHHHHHHhh
Confidence 89999999999998752 134444455555544 25556778888888764
No 61
>2phj_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus VF5} PDB: 2wqk_A
Probab=90.26 E-value=2.5 Score=37.04 Aligned_cols=113 Identities=9% Similarity=0.040 Sum_probs=65.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEEcCCCCCCCCCCccccHHHHHHH
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEAISDGYDQGGSAQAESIEAYLEK 93 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~~~~~~~~~~~~~~~~~~~~~ 93 (468)
||||+.---+. |---+.+|+++|.+.| +|+++.+...+.-.-.+. .....+++..+..+.. .....++..-
T Consensus 2 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si-t~~~pl~~~~~~~~~~---~~v~GTPaDC--- 72 (251)
T 2phj_A 2 PTFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSL-TFTEPLKMRKIDTDFY---TVIDGTPADC--- 72 (251)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSC-CCSSCEEEEEEETTEE---EETTCCHHHH---
T ss_pred CEEEEECCCCC-CCHHHHHHHHHHHhcC-CEEEEecCCCccCCccce-ecCCCeEEEEecCCCe---EEECCCHHHH---
Confidence 78888765554 4445788999999988 999999887665443221 1122455555543210 1122233222
Q ss_pred HHHhchHHHHHHHHHhcCCCCCccEEEeCC----------Cc---chHHHHHHHcCCceEEEcc
Q 012194 94 FWQIGPRSLCELVEKMNGSVVPVDCIVYDS----------FL---PWALDVAKKFGLVGAAFLT 144 (468)
Q Consensus 94 ~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~----------~~---~~~~~~A~~lgiP~i~~~~ 144 (468)
+.-.+..+... ++||+||... ++ ..|+.-|..+|||.|.+|.
T Consensus 73 --------V~lal~~l~~~-~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 127 (251)
T 2phj_A 73 --------VHLGYRVILEE-KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp --------HHHHHHTTTTT-CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred --------HHHHHHHhcCC-CCCCEEEECCcCCCcCCCCCccchHHHHHHHHHHcCCCeEEEEc
Confidence 12222333321 2459999643 23 2355667889999999875
No 62
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=88.55 E-value=0.78 Score=46.48 Aligned_cols=46 Identities=11% Similarity=0.037 Sum_probs=34.6
Q ss_pred CCeEEE---eecch---------HHHhcccCcceeeecC---C-cchHHHHHHcCCceeecccc
Q 012194 334 QKGLVV---NWCPQ---------LEVLAHEAAGCFLTHC---G-WNSTMEALSLGVPMVAMPQW 381 (468)
Q Consensus 334 ~nv~~~---~~vpq---------~~lL~~~~~~~~I~Hg---G-~~s~~Eal~~GvP~l~~P~~ 381 (468)
++|.++ .|++. .++++.|++ ||.-. | ..+.+||+++|+|+|+.-..
T Consensus 490 drVKVIf~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 490 DRVKMIFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp CSEEEEECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred CceeEEEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 555554 67765 468999999 87543 3 45899999999999986654
No 63
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=87.92 E-value=0.26 Score=47.41 Aligned_cols=42 Identities=21% Similarity=0.224 Sum_probs=32.2
Q ss_pred cCCCcEEEEEcCCCc-----cCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 10 SCRLVHCLVLSYPAQ-----GHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 10 ~~~~~~il~~~~~~~-----GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
..++|||++++.... |=...+..++++|+++||+|++++...
T Consensus 43 ~~~~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 43 SIKGKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp CCCSCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CCCCceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 356799998774421 333568899999999999999999864
No 64
>1j9j_A Stationary phase surviVal protein; SURE protein, unknown function; 1.90A {Thermotoga maritima} SCOP: c.106.1.1 PDB: 1ilv_A 1j9k_A* 1j9l_A*
Probab=86.94 E-value=4.4 Score=35.41 Aligned_cols=115 Identities=10% Similarity=-0.011 Sum_probs=63.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEEcCCCCCCCCCCccccHHHHHHH
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEAISDGYDQGGSAQAESIEAYLEK 93 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~~~~~~~~~~~~~~~~~~~~~ 93 (468)
||||+.---+. |---+.+|+++|.+.| +|+++.+...+.-.-.+. .....+++..+..+-....+....++..-
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si-Tl~~pl~~~~~~~~~~~~~~~v~GTPaDC--- 74 (247)
T 1j9j_A 1 MRILVTNDDGI-QSKGIIVLAELLSEEH-EVFVVAPDKERSATGHSI-TIHVPLWMKKVFISERVVAYSTTGTPADC--- 74 (247)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCC-CCSSCCCEEECCCSSSEEEEEESSCHHHH---
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc-cCCCCeEEEEeccCCCCceEEECCcHHHH---
Confidence 67776654443 3334788999999888 899999877665443221 11224555555432000012222333322
Q ss_pred HHHhchHHHHHHHHHhcCCCCCccEEEeCC----------Cc---chHHHHHHHcCCceEEEcc
Q 012194 94 FWQIGPRSLCELVEKMNGSVVPVDCIVYDS----------FL---PWALDVAKKFGLVGAAFLT 144 (468)
Q Consensus 94 ~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~----------~~---~~~~~~A~~lgiP~i~~~~ 144 (468)
+.--+..+.. .+||+||... ++ ..|+.-|..+|||.|.+|.
T Consensus 75 --------V~lal~~l~~--~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 128 (247)
T 1j9j_A 75 --------VKLAYNVVMD--KRVDLIVSGVNRGPNMGMDILHSGTVSGAMEGAMMNIPSIAISS 128 (247)
T ss_dssp --------HHHHHHTTST--TCCSEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred --------HHHHHHhhcc--CCCCEEEECCccCCCCCcCeecchhHHHHHHHHhcCCCeEEEec
Confidence 2222233332 2469999643 22 3355666789999999864
No 65
>2e6c_A 5'-nucleotidase SURE; SURE protein, cowith manganese ION and AMP hydrolase; 2.05A {Thermus thermophilus} PDB: 2e6b_A 2e69_A 2e6e_A 2e6g_A 2e6h_A
Probab=85.74 E-value=8.8 Score=33.44 Aligned_cols=113 Identities=14% Similarity=0.058 Sum_probs=64.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEEcCCCC---CCCCCCccccHHHH
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEAISDGY---DQGGSAQAESIEAY 90 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~~~~---~~~~~~~~~~~~~~ 90 (468)
||||+.---+. |---+.+|+++|.+.| +|+++.+...+.-.-.+. .....+++..++.+. ....+....++..-
T Consensus 1 M~ILlTNDDGi-~apGi~aL~~~l~~~g-~V~VVAP~~~~Sg~g~si-Tl~~pl~~~~~~~~~~~~~~~~~~v~GTPaDC 77 (244)
T 2e6c_A 1 MRILVTNDDGI-YSPGLWALAEAASQFG-EVFVAAPDTEQSAAGHAI-TIAHPVRAYPHPSPLHAPHFPAYRVRGTPADC 77 (244)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEECSSCCCCCSSC-CCSSCBEEEECCCCTTSCCCCEEEEESCHHHH
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc-cCCCCeEEEEeccCcCCCCCceEEEcCcHHHH
Confidence 67777654443 3334788999999888 899999877665443221 123357777765321 10012223343322
Q ss_pred HHHHHHhchHHHHHHHHHhcCCCCCccEEEeCC----------Cc---chHHHHHHHcCCceEEEcc
Q 012194 91 LEKFWQIGPRSLCELVEKMNGSVVPVDCIVYDS----------FL---PWALDVAKKFGLVGAAFLT 144 (468)
Q Consensus 91 ~~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~----------~~---~~~~~~A~~lgiP~i~~~~ 144 (468)
... -+. +. .+||+||... ++ ..++.-|..+|||.|.+|.
T Consensus 78 V~l-----------al~-l~---~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 129 (244)
T 2e6c_A 78 VAL-----------GLH-LF---GPVDLVLSGVNLGSNLGHEIWHSGTVAAAKQGYLFGLSAAAFSV 129 (244)
T ss_dssp HHH-----------HHH-HS---CSCCEEEEEEEESCCCGGGGGGCHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHH-----------HHc-CC---CCCCEEEECCccCCCCCcCeechHhHHHHHHHHhcCCCeEEEec
Confidence 221 111 21 3469999643 23 3355666789999999864
No 66
>3fgn_A Dethiobiotin synthetase; biotin biosynthesis, BIOD, ATP-BIND ligase, magnesium, nucleotide-binding; 1.85A {Mycobacterium tuberculosis} PDB: 3fmf_A* 3fmi_A* 3fpa_A*
Probab=85.65 E-value=2.3 Score=37.47 Aligned_cols=124 Identities=14% Similarity=0.066 Sum_probs=65.4
Q ss_pred CCcEEEEEcCCC--ccCHHHHHHHHHHHHhCCCeEEEEeC----C--cc--ccccccCCCCCCCCeEEEEcCCCCCCCCC
Q 012194 12 RLVHCLVLSYPA--QGHINPLLQFAKRLDHKGLKVTLVTT----Y--FI--SKSLHRDSSSSSASIALEAISDGYDQGGS 81 (468)
Q Consensus 12 ~~~~il~~~~~~--~GH~~p~l~La~~L~~rGh~Vt~~~~----~--~~--~~~~~~~~~~~~~~i~f~~~~~~~~~~~~ 81 (468)
+.|+.+|++... -|=..-.+.|++.|.++|++|.++=+ . .. ...+.+. ... .....++. +..
T Consensus 24 ~~m~~i~Itgt~t~vGKT~vt~gL~~~l~~~G~~V~~fKPv~~g~~~~~~D~~~~~~~--~g~-~~~~~~~~--~~~--- 95 (251)
T 3fgn_A 24 SHMTILVVTGTGTGVGKTVVCAALASAARQAGIDVAVCKPVQTGTARGDDDLAEVGRL--AGV-TQLAGLAR--YPQ--- 95 (251)
T ss_dssp SSCEEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEEEEECCGGGTCCHHHHHHHH--HCC-CEEEEEEE--CSS---
T ss_pred cCCCEEEEEeCCCCCcHHHHHHHHHHHHHHCCCeEEEEeeeecCCCCCCHHHHHHHHH--cCC-CCCCCCee--ECC---
Confidence 457776655443 38889999999999999999998742 1 10 1111111 000 00111111 110
Q ss_pred CccccHHHHHHHHHHhchHHHHHHHHHhcCCCCCccEEEeCCCc----------chHHHHHHHcCCceEEEcccc
Q 012194 82 AQAESIEAYLEKFWQIGPRSLCELVEKMNGSVVPVDCIVYDSFL----------PWALDVAKKFGLVGAAFLTQS 146 (468)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~~~----------~~~~~~A~~lgiP~i~~~~~~ 146 (468)
..................+.+.+.++++. ..+|+||+|... .....+|+.++.|++.+...-
T Consensus 96 p~sP~~aa~~~~~~~~~~~~i~~~~~~l~---~~~D~vlIEGagGl~~pl~~~~~~~adla~~l~~pVILV~~~~ 167 (251)
T 3fgn_A 96 PMAPAAAAEHAGMALPARDQIVRLIADLD---RPGRLTLVEGAGGLLVELAEPGVTLRDVAVDVAAAALVVVTAD 167 (251)
T ss_dssp SSCHHHHHHHTTCCCCCHHHHHHHHHTTC---CTTCEEEEECSSSTTCEEETTTEEHHHHHHHTTCEEEEEECSS
T ss_pred CCChHHHHHHcCCCCCCHHHHHHHHHHHH---hcCCEEEEECCCCCcCCcCcccchHHHHHHHcCCCEEEEEcCC
Confidence 00111111110000012234555555554 347999998731 235789999999999987654
No 67
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=84.86 E-value=2.5 Score=37.03 Aligned_cols=40 Identities=20% Similarity=0.149 Sum_probs=29.9
Q ss_pred hcCCCcEEEEEcCC--CccCHHHHHHHHHHHHhCCCeEEEEe
Q 012194 9 ASCRLVHCLVLSYP--AQGHINPLLQFAKRLDHKGLKVTLVT 48 (468)
Q Consensus 9 ~~~~~~~il~~~~~--~~GH~~p~l~La~~L~~rGh~Vt~~~ 48 (468)
+-++.+|.+|++.. .-|=..-.+.|++.|.++|++|.++=
T Consensus 16 ~~~~m~k~i~ItgT~t~vGKT~vs~gL~~~L~~~G~~V~~fK 57 (242)
T 3qxc_A 16 NLYFQGHMLFISATNTNAGKTTCARLLAQYCNACGVKTILLK 57 (242)
T ss_dssp ---CCCEEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred HHhhcCcEEEEEeCCCCCcHHHHHHHHHHHHHhCCCceEEEe
Confidence 33455677766654 33888999999999999999999873
No 68
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=84.44 E-value=7.4 Score=32.66 Aligned_cols=97 Identities=14% Similarity=0.096 Sum_probs=62.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc------ccccccCCCCCCCCeEEEEcCCCCCCCCCCcccc
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFI------SKSLHRDSSSSSASIALEAISDGYDQGGSAQAES 86 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~------~~~~~~~~~~~~~~i~f~~~~~~~~~~~~~~~~~ 86 (468)
+-.|++++..+.|-..-.+.+|-+.+.+|++|.|+..-.. ...+++. ++.+.....++.- . ...
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L------~v~~~~~g~gf~~---~-~~~ 97 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPH------GVEFQVMATGFTW---E-TQN 97 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGG------TCEEEECCTTCCC---C-GGG
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhC------CcEEEEccccccc---C-CCC
Confidence 4578999999999999999999999999999999965443 1233422 4777777764432 1 111
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhcCCCCCccEEEeCCCc
Q 012194 87 IEAYLEKFWQIGPRSLCELVEKMNGSVVPVDCIVYDSFL 125 (468)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~~~ 125 (468)
... -.......+....+.+.. ..+|+||.|...
T Consensus 98 ~~~----~~~~a~~~l~~a~~~l~~--~~yDlvILDEi~ 130 (196)
T 1g5t_A 98 REA----DTAACMAVWQHGKRMLAD--PLLDMVVLDELT 130 (196)
T ss_dssp HHH----HHHHHHHHHHHHHHHTTC--TTCSEEEEETHH
T ss_pred cHH----HHHHHHHHHHHHHHHHhc--CCCCEEEEeCCC
Confidence 111 111123445555555543 347999999764
No 69
>1l5x_A SurviVal protein E; structural genomics, putative acid phosphatase, mixed alpha/ protein, N-terminal rossmann-fold like; 2.00A {Pyrobaculum aerophilum} SCOP: c.106.1.1
Probab=82.51 E-value=7.6 Score=34.63 Aligned_cols=114 Identities=12% Similarity=-0.014 Sum_probs=63.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEEcCCCCCCCCCCccccHHHHHHH
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEAISDGYDQGGSAQAESIEAYLEK 93 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~~~~~~~~~~~~~~~~~~~~~ 93 (468)
||||+.---+. +---+.+|+++|.+.| +|+++.+...+.-.-.+. .....+++..++.+-.. .+....++..-.
T Consensus 1 M~ILlTNDDGi-~ApGi~aL~~aL~~~g-~V~VVAP~~~qSg~g~si-Tl~~pl~~~~~~~~~~~-~~~v~GTPaDCV-- 74 (280)
T 1l5x_A 1 MKILVTNDDGV-HSPGLRLLYQFALSLG-DVDVVAPESPKSATGLGI-TLHKPLRMYEVDLCGFR-AIATSGTPSDTV-- 74 (280)
T ss_dssp CEEEEECSSCT-TCHHHHHHHHHHGGGS-EEEEEEESSCTTTSCSSC-CCSSCBCEEEEECSSSE-EEEESSCHHHHH--
T ss_pred CeEEEEcCCCC-CcHhHHHHHHHHHhCC-CEEEEecCCCCcCCcccc-cCCCCeEEEEeccCCCc-eEEECCcHHHHH--
Confidence 67777654443 3334788999999888 999999887665443221 11224555555321001 122233333221
Q ss_pred HHHhchHHHHHHHHHhcCCCCCccEEEeC-----------CCc---chHHHHHHHcCCceEEEccc
Q 012194 94 FWQIGPRSLCELVEKMNGSVVPVDCIVYD-----------SFL---PWALDVAKKFGLVGAAFLTQ 145 (468)
Q Consensus 94 ~~~~~~~~~~~~l~~l~~~~~p~DlVI~D-----------~~~---~~~~~~A~~lgiP~i~~~~~ 145 (468)
.--+..+ . .+||+||.. .++ ..|+.=|..+|||.|.+|..
T Consensus 75 ---------~lal~~l-~--~~PDLVvSGIN~G~Nlg~d~v~ySGTVgAA~Ea~~~GiPaIA~S~~ 128 (280)
T 1l5x_A 75 ---------YLATFGL-G--RKYDIVLSGINLGDNTSLQVILSSGTLGAAFQAALLGIPALAYSAY 128 (280)
T ss_dssp ---------HHHHHHH-T--SCCSEEEEEEEEBCCCSHHHHTTCHHHHHHHHHHHTTCCEEEEEEC
T ss_pred ---------HHHHhcC-C--CCCCEEEECCccCCcCCccccccchhHHHHHHHHHcCCCeEEEEcc
Confidence 1222223 1 246999963 223 33455567899999999753
No 70
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=81.24 E-value=2.2 Score=33.55 Aligned_cols=41 Identities=7% Similarity=-0.027 Sum_probs=35.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFI 52 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 52 (468)
.+.||++.+.++-+|-....-++..|..+|++|.+.+....
T Consensus 2 ~~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p 42 (137)
T 1ccw_A 2 EKKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGVLSP 42 (137)
T ss_dssp CCCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEEEEC
T ss_pred CCCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCCCCC
Confidence 45689999999999999999999999999999998876443
No 71
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=80.62 E-value=5.8 Score=33.19 Aligned_cols=38 Identities=16% Similarity=0.299 Sum_probs=30.2
Q ss_pred cEEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 14 VHCLVLS--YPAQGHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 14 ~~il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
|||+.++ -|+-|=-.-...||..|+++|++|.++-.+.
T Consensus 1 M~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D~ 40 (206)
T 4dzz_A 1 MKVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTDP 40 (206)
T ss_dssp CEEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CeEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECCC
Confidence 5665443 4566888999999999999999999988653
No 72
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=79.87 E-value=1.4 Score=35.84 Aligned_cols=42 Identities=21% Similarity=0.167 Sum_probs=36.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFI 52 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 52 (468)
.++.||++.+.++-+|-....-++..|..+|++|.+......
T Consensus 16 ~~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p 57 (161)
T 2yxb_A 16 RRRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQT 57 (161)
T ss_dssp CCSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCC
T ss_pred CCCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCC
Confidence 356799999999999999999999999999999998876433
No 73
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=78.89 E-value=2.9 Score=34.47 Aligned_cols=43 Identities=16% Similarity=0.141 Sum_probs=35.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccc
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLH 57 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 57 (468)
+||++...|+.|=+. ...+.+.|.++|++|.++.++.....+.
T Consensus 6 k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~fi~ 48 (175)
T 3qjg_A 6 ENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKFIN 48 (175)
T ss_dssp CEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGGSC
T ss_pred CEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHHhh
Confidence 689887777766654 8899999999999999999988876665
No 74
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=77.86 E-value=13 Score=32.50 Aligned_cols=31 Identities=23% Similarity=0.146 Sum_probs=23.3
Q ss_pred ccEEE-eCCCc-chHHHHHHHcCCceEEEcccc
Q 012194 116 VDCIV-YDSFL-PWALDVAKKFGLVGAAFLTQS 146 (468)
Q Consensus 116 ~DlVI-~D~~~-~~~~~~A~~lgiP~i~~~~~~ 146 (468)
||+|| +|... ..+..=|.++|||+|.+.-+.
T Consensus 159 Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivDTn 191 (256)
T 2vqe_B 159 PDAIFVVDPTKEAIAVREARKLFIPVIALADTD 191 (256)
T ss_dssp CSEEEESCTTTTHHHHHHHHHTTCCCEECCCTT
T ss_pred CCEEEEeCCccchHHHHHHHHcCCCEEEEecCC
Confidence 58877 66655 457888999999999976443
No 75
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=77.39 E-value=2 Score=36.59 Aligned_cols=45 Identities=11% Similarity=-0.017 Sum_probs=38.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccc
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLH 57 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 57 (468)
+++||++...|+.|-+. ...|.+.|.++|++|.++.++.....+.
T Consensus 3 ~~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~ 47 (209)
T 3zqu_A 3 GPERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMA 47 (209)
T ss_dssp SCSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred CCCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHH
Confidence 34689988888877777 8899999999999999999988877776
No 76
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=76.72 E-value=17 Score=32.16 Aligned_cols=41 Identities=20% Similarity=0.278 Sum_probs=32.2
Q ss_pred CCcEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012194 12 RLVHCLVLSY--PAQGHINPLLQFAKRLDHKGLKVTLVTTYFI 52 (468)
Q Consensus 12 ~~~~il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 52 (468)
+.+|+++++. |+-|--.-...||..|+++|.+|.++-.+..
T Consensus 80 ~~~kvI~vts~kgG~GKTt~a~nLA~~lA~~G~rVLLID~D~~ 122 (271)
T 3bfv_A 80 SAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDMR 122 (271)
T ss_dssp CCCCEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CCCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3567665553 5668888999999999999999999876643
No 77
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=76.24 E-value=2.4 Score=38.31 Aligned_cols=32 Identities=31% Similarity=0.433 Sum_probs=23.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
|||++... .|-+- -.|+++|.++||+|+.++-
T Consensus 1 MkILVTGa--tGfIG--~~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVGGG--TGFIG--TALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp CEEEEETT--TSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECC--CCHHH--HHHHHHHHHCCCEEEEEEC
Confidence 78876643 34443 3578999999999999864
No 78
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=75.75 E-value=2.2 Score=35.99 Aligned_cols=43 Identities=14% Similarity=0.148 Sum_probs=36.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCccccccc
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHK-GLKVTLVTTYFISKSLH 57 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~~~~~~ 57 (468)
|||++...|+.|-+. ...+.+.|.++ |++|.++.++.....+.
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~ 44 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIE 44 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhH
Confidence 688887777777665 89999999999 99999999988777766
No 79
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=75.28 E-value=5.2 Score=41.40 Aligned_cols=111 Identities=11% Similarity=0.017 Sum_probs=75.1
Q ss_pred eecchHHHhcccCcceeeecCCcchHHHHHHcCCceeecccccchhHHHHHHHhhhcceeEecCCC----CCccCHHHHH
Q 012194 340 NWCPQLEVLAHEAAGCFLTHCGWNSTMEALSLGVPMVAMPQWSDQSTNGKYIMDVWKMGLKVPADE----KGIVRREAIA 415 (468)
Q Consensus 340 ~~vpq~~lL~~~~~~~~I~HgG~~s~~Eal~~GvP~l~~P~~~DQ~~na~~l~~~~g~G~~l~~~~----~~~~~~~~l~ 415 (468)
++.+-.++|..+|+ +||= =.+.+.|.+..++|+|....-.|++.+- .. | ...+..+ .---+.++|.
T Consensus 605 ~~~di~~ll~~aD~--lITD-ySSv~fD~~~l~kPiif~~~D~~~Y~~~----~r-g--~y~d~~~~~pg~~~~~~~eL~ 674 (729)
T 3l7i_A 605 NYNDVSELFLISDC--LITD-YSSVMFDYGILKRPQFFFAYDIDKYDKG----LR-G--FYMNYMEDLPGPIYTEPYGLA 674 (729)
T ss_dssp TCSCHHHHHHTCSE--EEES-SCTHHHHHGGGCCCEEEECTTTTTTTSS----CC-S--BSSCTTSSSSSCEESSHHHHH
T ss_pred CCcCHHHHHHHhCE--EEee-chHHHHhHHhhCCCEEEecCCHHHHhhc----cC-C--cccChhHhCCCCeECCHHHHH
Confidence 45566799999999 9998 4678899999999999987776665431 12 2 2222110 0023788999
Q ss_pred HHHHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH
Q 012194 416 HCISEILEGERGKEIRQNAGKWSNFAKEAVAKGGSSDKNIDDFVANLI 463 (468)
Q Consensus 416 ~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~l~ 463 (468)
++|.....+. ..++++.+++.+.+-.. ++|.++++.++.+.+...
T Consensus 675 ~~i~~~~~~~--~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~~ 719 (729)
T 3l7i_A 675 KELKNLDKVQ--QQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDIK 719 (729)
T ss_dssp HHHTTHHHHH--HHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHHH
T ss_pred HHHhhhhccc--hhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcCc
Confidence 9988877542 37788887777777543 456666777777766655
No 80
>3zzm_A Bifunctional purine biosynthesis protein PURH; transferase, hydrolase; HET: JLN; 2.20A {Mycobacterium tuberculosis} PDB: 4a1o_A*
Probab=75.05 E-value=2.1 Score=41.23 Aligned_cols=106 Identities=14% Similarity=0.272 Sum_probs=58.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEEcC--CCCCCCCCCc-cccH
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEAIS--DGYDQGGSAQ-AESI 87 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~--~~~~~~~~~~-~~~~ 87 (468)
+++||-+|++.. |=.-++.+|+.|.+.|+++. ++..-...+++. |+.+..+. .++|+ .+.. .+++
T Consensus 7 ~~~i~~aLISVs---DK~glvelAk~L~~lGfeI~--ATgGTak~L~e~------GI~v~~V~~vTgfPE-il~GRVKTL 74 (523)
T 3zzm_A 7 RRPIRRALISVY---DKTGLVDLAQGLSAAGVEII--STGSTAKTIADT------GIPVTPVEQLTGFPE-VLDGRVKTL 74 (523)
T ss_dssp CCCCCEEEEEES---SCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHTT------TCCCEEHHHHHSCCC-CTTTTSSSC
T ss_pred cccccEEEEEEe---ccccHHHHHHHHHHCCCEEE--EcchHHHHHHHc------CCceeeccccCCCch-hhCCccccC
Confidence 445666666663 44458899999999999875 444555566643 78877774 23444 2222 2222
Q ss_pred HH-HHHHHHH--hchHHHHHHHHHhcCCCCCccEEEeCCCcchHHHHH
Q 012194 88 EA-YLEKFWQ--IGPRSLCELVEKMNGSVVPVDCIVYDSFLPWALDVA 132 (468)
Q Consensus 88 ~~-~~~~~~~--~~~~~~~~~l~~l~~~~~p~DlVI~D~~~~~~~~~A 132 (468)
.. ....++. .....+.++ ++.. -.|+|+||++ ++++-..++
T Consensus 75 HP~ihgGiLa~r~~~~h~~~l-~~~~--i~~iDlVvvN-LYPF~~tv~ 118 (523)
T 3zzm_A 75 HPRVHAGLLADLRKSEHAAAL-EQLG--IEAFELVVVN-LYPFSQTVE 118 (523)
T ss_dssp SHHHHHHHHCCTTSHHHHHHH-HHHT--CCCCSEEEEE-CCCHHHHHH
T ss_pred CchhhhhhccCCCCHHHHHHH-HHCC--CCceeEEEEe-CCChHHHHh
Confidence 21 2222222 122333333 3322 2579999999 665555444
No 81
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=74.50 E-value=20 Score=32.34 Aligned_cols=41 Identities=15% Similarity=0.148 Sum_probs=31.8
Q ss_pred CCcEEEEEcC--CCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012194 12 RLVHCLVLSY--PAQGHINPLLQFAKRLDHKGLKVTLVTTYFI 52 (468)
Q Consensus 12 ~~~~il~~~~--~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 52 (468)
+.+|+++++. |+-|=-.-...||..|++.|.+|.++-.+..
T Consensus 102 ~~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~r 144 (299)
T 3cio_A 102 TENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFIDADLR 144 (299)
T ss_dssp CSCCEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCCeEEEEECCCCCCChHHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 3456655443 5668899999999999999999999876543
No 82
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=73.85 E-value=4.7 Score=34.27 Aligned_cols=45 Identities=16% Similarity=0.045 Sum_probs=37.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccc
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLH 57 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 57 (468)
.+++||++...|+.+-+. ...|.+.|.++| +|.++.++.....+.
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv~ 61 (209)
T 1mvl_A 17 PRKPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFLD 61 (209)
T ss_dssp --CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTCC
T ss_pred cCCCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhcC
Confidence 345799998888888766 899999999999 999999988877766
No 83
>2wqk_A 5'-nucleotidase SURE; SURE protein, putative acid phosphatase, structural genomics, 3-D structure, mixed alpha/beta protein, NPPSFA; 1.50A {Aquifex aeolicus}
Probab=73.28 E-value=36 Score=29.74 Aligned_cols=112 Identities=9% Similarity=0.046 Sum_probs=59.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEEcCCCCCCCCCCccccHHHHHHHH
Q 012194 15 HCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEAISDGYDQGGSAQAESIEAYLEKF 94 (468)
Q Consensus 15 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (468)
|||+.---+. +---+.+|+++|.+.| +|+++.+...+.-.-.+. .....+++..+..... .....++..-
T Consensus 3 ~ILlTNDDGi-~apGi~~L~~~l~~~g-~V~VvAP~~~~Sg~g~si-T~~~pl~~~~~~~~~~---~~v~GTPaDC---- 72 (251)
T 2wqk_A 3 TFLLVNDDGY-FSPGINALREALKSLG-RVVVVAPDRNLSGVGHSL-TFTEPLKMRKIDTDFY---TVIDGTPADC---- 72 (251)
T ss_dssp EEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTSCCSC-CCSSCEEEEEEETTEE---EETTCCHHHH----
T ss_pred EEEEEcCCCC-CcHHHHHHHHHHHhCC-CEEEEeeCCCCcccccCc-CCCCCceeEEeeccce---eecCCChHHH----
Confidence 6666543333 2234778899999998 598888776654333211 1122455554432110 0112222221
Q ss_pred HHhchHHHHHHHHHhcCCCCCccEEEeC----------CCc---chHHHHHHHcCCceEEEcc
Q 012194 95 WQIGPRSLCELVEKMNGSVVPVDCIVYD----------SFL---PWALDVAKKFGLVGAAFLT 144 (468)
Q Consensus 95 ~~~~~~~~~~~l~~l~~~~~p~DlVI~D----------~~~---~~~~~~A~~lgiP~i~~~~ 144 (468)
+.--+..+... .+||+||.. .++ .+|+.=|..+|+|.|.+|.
T Consensus 73 -------V~lal~~~l~~-~~PDLVvSGIN~G~N~g~dv~ySGTVgAA~Ea~~~GipaIA~S~ 127 (251)
T 2wqk_A 73 -------VHLGYRVILEE-KKPDLVLSGINEGPNLGEDITYSGTVSGAMEGRILGIPSIAFSA 127 (251)
T ss_dssp -------HHHHHHTTTTT-CCCSEEEEEEESSCCCGGGGGGCHHHHHHHHHHHTTCCEEEEEE
T ss_pred -------HhhhhhhhcCC-CCCCEEEeCccCCCccccceecchHHHHHHHHHhcCCCeEEEEc
Confidence 11122333322 345999983 333 3356667889999999874
No 84
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=72.88 E-value=11 Score=34.87 Aligned_cols=41 Identities=22% Similarity=0.171 Sum_probs=32.9
Q ss_pred CCcEEEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012194 12 RLVHCLVLS-YPAQGHINPLLQFAKRLDHKGLKVTLVTTYFI 52 (468)
Q Consensus 12 ~~~~il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 52 (468)
+.++|+|++ -|+-|-..-..+||..|+++|++|.++..+..
T Consensus 24 ~~~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~~ 65 (349)
T 3ug7_A 24 DGTKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDPA 65 (349)
T ss_dssp CSCEEEEEECSSSTTHHHHHHHHHHHHHHSSCCEEEEECCTT
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 344565554 45669999999999999999999999998763
No 85
>3ty2_A 5'-nucleotidase SURE; surviVal protein, phosphatase, hydrolase; HET: MSE; 1.89A {Coxiella burnetii} SCOP: c.106.1.0
Probab=72.08 E-value=5 Score=35.28 Aligned_cols=117 Identities=12% Similarity=0.054 Sum_probs=63.6
Q ss_pred hhcCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEEcCCCCCCCCCCccccH
Q 012194 8 AASCRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEAISDGYDQGGSAQAESI 87 (468)
Q Consensus 8 ~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~~~~~~~~~~~~~~~ 87 (468)
+...++||||+.---+. |---+.+|+++|.+ +|+|+++.+...+.-.-.+. .....+.+..+..++ +....++
T Consensus 6 ~~~~~~m~ILlTNDDGi-~apGi~aL~~~l~~-~~~V~VVAP~~~~Sg~g~si-Tl~~pl~~~~~~~~~----~~v~GTP 78 (261)
T 3ty2_A 6 KTATPKLRLLLSNDDGV-YAKGLAILAKTLAD-LGEVDVVAPDRNRSGASNSL-TLNAPLHIKNLENGM----ISVEGTP 78 (261)
T ss_dssp -----CCEEEEECSSCT-TCHHHHHHHHHHTT-TSEEEEEEESSCCTTCTTCC-CCSSCEEEEECTTSC----EEESSCH
T ss_pred hccCCCCeEEEEcCCCC-CCHHHHHHHHHHHh-cCCEEEEecCCCCcCcccce-ecCCCeEEEEecCCe----EEECCCH
Confidence 34556799988776555 44457888999976 89999999887665443211 112245565544221 2223333
Q ss_pred HHHHHHHHHhchHHHHHHHHHhcCCCCCccEEEeCC----------CcchHH---HHHHHcCCceEEEcc
Q 012194 88 EAYLEKFWQIGPRSLCELVEKMNGSVVPVDCIVYDS----------FLPWAL---DVAKKFGLVGAAFLT 144 (468)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~----------~~~~~~---~~A~~lgiP~i~~~~ 144 (468)
..-... .+..+.. .+||+||... ++.++. .-|..+|||.|.+|.
T Consensus 79 aDCV~l-----------al~~l~~--~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 135 (261)
T 3ty2_A 79 TDCVHL-----------AITGVLP--EMPDMVVAGINAGPNLGDDVWYSGTVAAAMEGRFLGLPALAVSL 135 (261)
T ss_dssp HHHHHH-----------HTTTTSS--SCCSEEEEEEEESCCCGGGGGTCHHHHHC-CCSTTSCCEEEEEE
T ss_pred HHHHHH-----------HHHHhcC--CCCCEEEECCcCCCCCCCCcCCchHHHHHHHHHHcCCCeEEEEc
Confidence 322221 1122222 2369999643 233333 334678999999875
No 86
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=70.96 E-value=4.7 Score=34.06 Aligned_cols=45 Identities=20% Similarity=-0.001 Sum_probs=36.4
Q ss_pred CCcEEEEEcCCCccCHH-HHHHHHHHHHhCCCeEEEEeCCccccccc
Q 012194 12 RLVHCLVLSYPAQGHIN-PLLQFAKRLDHKGLKVTLVTTYFISKSLH 57 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~-p~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 57 (468)
+.+||++.-.|+ +..+ =.+.+.++|.++|++|.++.++.....+.
T Consensus 6 ~~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~~~i~ 51 (201)
T 3lqk_A 6 AGKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQTTDT 51 (201)
T ss_dssp TTCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSCCTTC
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHHHHHH
Confidence 456898877776 4555 78999999999999999999987776665
No 87
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=70.76 E-value=6.3 Score=35.26 Aligned_cols=42 Identities=17% Similarity=0.245 Sum_probs=25.8
Q ss_pred hhhcCCCcEEEE-EcCCCccCHHHHH--HHHHHHHhCCCeEEEEe
Q 012194 7 KAASCRLVHCLV-LSYPAQGHINPLL--QFAKRLDHKGLKVTLVT 48 (468)
Q Consensus 7 ~~~~~~~~~il~-~~~~~~GH~~p~l--~La~~L~~rGh~Vt~~~ 48 (468)
+.-.|+.||||+ +.+|-..-++-.+ ...+.|.++||+|++.-
T Consensus 16 ~~~~m~~MKiLII~aHP~~~S~n~aL~~~~~~~l~~~G~eV~v~D 60 (280)
T 4gi5_A 16 ENLYFQSMKVLLIYAHPEPRSLNGALKNFAIRHLQQAGHEVQVSD 60 (280)
T ss_dssp ------CCEEEEEECCSCTTSHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CcchhhCCeEEEEEeCCCCccHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 344578899985 5566555555433 46788888999999874
No 88
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=70.44 E-value=30 Score=28.84 Aligned_cols=109 Identities=15% Similarity=0.153 Sum_probs=65.3
Q ss_pred cCHHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEEcCCC-------------CCCC----CC-Ccccc
Q 012194 25 GHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEAISDG-------------YDQG----GS-AQAES 86 (468)
Q Consensus 25 GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~~~-------------~~~~----~~-~~~~~ 86 (468)
|.+.-.+.+|+++ ..|.+|.+.-+ .....+++. .++..+.++.. .... ++ .....
T Consensus 36 ~~l~~~v~~a~~~-~~~~dVIISRG-gta~~lr~~-----~~iPVV~I~~s~~Dil~al~~a~~~~~kIavvg~~~~~~~ 108 (196)
T 2q5c_A 36 ASLTRASKIAFGL-QDEVDAIISRG-ATSDYIKKS-----VSIPSISIKVTRFDTMRAVYNAKRFGNELALIAYKHSIVD 108 (196)
T ss_dssp CCHHHHHHHHHHH-TTTCSEEEEEH-HHHHHHHTT-----CSSCEEEECCCHHHHHHHHHHHGGGCSEEEEEEESSCSSC
T ss_pred CCHHHHHHHHHHh-cCCCeEEEECC-hHHHHHHHh-----CCCCEEEEcCCHhHHHHHHHHHHhhCCcEEEEeCcchhhH
Confidence 5677788889999 88888666554 444444432 13555554311 0000 00 01112
Q ss_pred HHHHHHHHHH--------hchHHHHHHHHHhcCCCCCccEEEeCCCcchHHHHHHHcCCceEEEcccc
Q 012194 87 IEAYLEKFWQ--------IGPRSLCELVEKMNGSVVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQS 146 (468)
Q Consensus 87 ~~~~~~~~~~--------~~~~~~~~~l~~l~~~~~p~DlVI~D~~~~~~~~~A~~lgiP~i~~~~~~ 146 (468)
.. .+..++. .....+...++++.+. .+|+||.| ..+..+|+++|+|.+.+.+..
T Consensus 109 ~~-~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~~--G~~vvVG~---~~~~~~A~~~Gl~~vli~sg~ 170 (196)
T 2q5c_A 109 KH-EIEAMLGVKIKEFLFSSEDEITTLISKVKTE--NIKIVVSG---KTVTDEAIKQGLYGETINSGE 170 (196)
T ss_dssp HH-HHHHHHTCEEEEEEECSGGGHHHHHHHHHHT--TCCEEEEC---HHHHHHHHHTTCEEEECCCCH
T ss_pred HH-HHHHHhCCceEEEEeCCHHHHHHHHHHHHHC--CCeEEECC---HHHHHHHHHcCCcEEEEecCH
Confidence 22 2222222 1345678888888875 48999998 446889999999999987754
No 89
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=69.62 E-value=33 Score=27.46 Aligned_cols=133 Identities=15% Similarity=0.188 Sum_probs=72.8
Q ss_pred eEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEEeecchHHHhc------ccCcce
Q 012194 282 VVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQLEVLA------HEAAGC 355 (468)
Q Consensus 282 ~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL~------~~~~~~ 355 (468)
.|-|-+||.. +....++....++.+|..+-+.+-+.+. .|+.. .++.. .+++
T Consensus 4 ~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~saHR--~p~~~----------------~~~~~~a~~~~~~~V-- 61 (159)
T 3rg8_A 4 LVIILMGSSS--DMGHAEKIASELKTFGIEYAIRIGSAHK--TAEHV----------------VSMLKEYEALDRPKL-- 61 (159)
T ss_dssp EEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCTTT--CHHHH----------------HHHHHHHHTSCSCEE--
T ss_pred eEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcccC--CHHHH----------------HHHHHHhhhcCCCcE--
Confidence 5666677765 5677888899999998875444433211 11111 12221 2445
Q ss_pred eeecCCcchHHHHHH---cCCceeecccccch-hHHHHHHHhh-h--cceeEecCCCCCccCHHHHHHHHHHHhcCccHH
Q 012194 356 FLTHCGWNSTMEALS---LGVPMVAMPQWSDQ-STNGKYIMDV-W--KMGLKVPADEKGIVRREAIAHCISEILEGERGK 428 (468)
Q Consensus 356 ~I~HgG~~s~~Eal~---~GvP~l~~P~~~DQ-~~na~~l~~~-~--g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~ 428 (468)
+|.=+|...-+-++. .-+|+|.+|...-. .... .+.-. | |+.+.-- ++-.++.-+...|.. +.|+
T Consensus 62 iIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~d-LlS~vqmp~GvpVatv---~~~~nAa~lA~~Il~-~~d~--- 133 (159)
T 3rg8_A 62 YITIAGRSNALSGFVDGFVKGATIACPPPSDSFAGAD-IYSSLRMPSGISPALV---LEPKNAALLAARIFS-LYDK--- 133 (159)
T ss_dssp EEEECCSSCCHHHHHHHHSSSCEEECCCCCCGGGGTH-HHHHHCCCTTCCCEEC---CSHHHHHHHHHHHHT-TTCH---
T ss_pred EEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCCcc-HHHHHhCCCCCceEEe---cCchHHHHHHHHHHh-CCCH---
Confidence 888887654433333 56899999964321 1111 22211 0 3332211 124455555544433 4565
Q ss_pred HHHHHHHHHHHHHHHH
Q 012194 429 EIRQNAGKWSNFAKEA 444 (468)
Q Consensus 429 ~~~~~a~~~~~~~~~~ 444 (468)
+++++.+..++...+.
T Consensus 134 ~l~~kl~~~r~~~~~~ 149 (159)
T 3rg8_A 134 EIADSVKSYMESNAQK 149 (159)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8888888888877754
No 90
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=68.30 E-value=4.2 Score=32.46 Aligned_cols=35 Identities=20% Similarity=0.342 Sum_probs=27.0
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
|++.||+++.. |++- ..+++.|.++||+|+++...
T Consensus 1 ~~~~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 1 HRKDHFIVCGH---SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCCSCEEEECC---SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCCCcEEEECC---CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 34578888844 4444 67899999999999999874
No 91
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=67.10 E-value=22 Score=30.67 Aligned_cols=106 Identities=12% Similarity=0.029 Sum_probs=59.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCccc----cccccCCCCCCCCeEEEEcCCCCCCCCCCccc
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHK--GLKVTLVTTYFIS----KSLHRDSSSSSASIALEAISDGYDQGGSAQAE 85 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~----~~~~~~~~~~~~~i~f~~~~~~~~~~~~~~~~ 85 (468)
+.|||+|+..|+.. -+.++.++|.+. +++|..+.+.... +.+++ .|+.+..++.. .+.
T Consensus 21 ~~~rI~~l~SG~g~---~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~------~gIp~~~~~~~----~~~--- 84 (229)
T 3auf_A 21 HMIRIGVLISGSGT---NLQAILDGCREGRIPGRVAVVISDRADAYGLERARR------AGVDALHMDPA----AYP--- 84 (229)
T ss_dssp TCEEEEEEESSCCH---HHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHH------TTCEEEECCGG----GSS---
T ss_pred CCcEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHH------cCCCEEEECcc----ccc---
Confidence 44799998777642 256677778776 6888766544221 23333 37887766521 011
Q ss_pred cHHHHHHHHHHhchHHHHHHHHHhcCCCCCccEEEeCCCc-chHHHHHHHcCCceEEEcccc
Q 012194 86 SIEAYLEKFWQIGPRSLCELVEKMNGSVVPVDCIVYDSFL-PWALDVAKKFGLVGAAFLTQS 146 (468)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~~~-~~~~~~A~~lgiP~i~~~~~~ 146 (468)
+- ..+.+.+.+.++++ .+|+||+-.+. .....+-..+...++-+.++.
T Consensus 85 ~r--------~~~~~~~~~~l~~~-----~~Dliv~agy~~IL~~~~l~~~~~~~iNiHpSL 133 (229)
T 3auf_A 85 SR--------TAFDAALAERLQAY-----GVDLVCLAGYMRLVRGPMLTAFPNRILNIHPSL 133 (229)
T ss_dssp SH--------HHHHHHHHHHHHHT-----TCSEEEESSCCSCCCHHHHHHSTTCEEEEESSC
T ss_pred ch--------hhccHHHHHHHHhc-----CCCEEEEcChhHhCCHHHHhhccCCEEEEccCc
Confidence 10 11122233444443 25999987765 444556666777777766543
No 92
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=66.80 E-value=3.8 Score=32.28 Aligned_cols=98 Identities=13% Similarity=0.127 Sum_probs=61.0
Q ss_pred CcEEEE-EcCCCc-cCHHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEEcCCCCCCCCCCccccHHHH
Q 012194 13 LVHCLV-LSYPAQ-GHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEAISDGYDQGGSAQAESIEAY 90 (468)
Q Consensus 13 ~~~il~-~~~~~~-GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~~~~~~~~~~~~~~~~~~ 90 (468)
-||+++ +..|-. -.+--.+-++..|.++||+|++++++.....++-+ . |++..- ....
T Consensus 6 ~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLleva---D---------Pe~~Y~---~~~~----- 65 (157)
T 1kjn_A 6 TGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQVA---D---------PEGIYT---DEMV----- 65 (157)
T ss_dssp CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHH---S---------TTCCSC---SEEE-----
T ss_pred ceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhheecc---C---------CCcchh---ccee-----
Confidence 477764 445544 55666889999999999999999999998888832 1 111111 1111
Q ss_pred HHHHHHhchHHHHHHHHHhcCCCCCccEEEeCCCc----chHHHHHHHcCCceEEE
Q 012194 91 LEKFWQIGPRSLCELVEKMNGSVVPVDCIVYDSFL----PWALDVAKKFGLVGAAF 142 (468)
Q Consensus 91 ~~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~~~----~~~~~~A~~lgiP~i~~ 142 (468)
.+...++++.+ +.+|+++.-..- ..+....+.++.+.+.+
T Consensus 66 ----------diD~~l~~i~e--~~~d~~~~FvHNDAgvsY~~T~~~i~~~~~~ai 109 (157)
T 1kjn_A 66 ----------DLESCINELAE--GDYEFLAGFVPNDAAAAYLVTFAGILNTETLAI 109 (157)
T ss_dssp ----------EHHHHHHHCCT--TSCSEEEEEESSHHHHHHHHHHHHHHCSEEEEE
T ss_pred ----------eHHHHHhhhhh--cCCCEEEEEEecchhHHHHHHHHHhcCCCeEEE
Confidence 23444555543 358998865443 33455556777776654
No 93
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=66.74 E-value=20 Score=32.84 Aligned_cols=34 Identities=18% Similarity=0.034 Sum_probs=22.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
+.+|||+|+. --+-...+.++|.++||+|..+.+
T Consensus 20 ~~~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt 53 (329)
T 2bw0_A 20 FQSMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFT 53 (329)
T ss_dssp -CCCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEe
Confidence 3459999992 112233467888889999986554
No 94
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=66.42 E-value=9 Score=32.99 Aligned_cols=41 Identities=17% Similarity=0.148 Sum_probs=36.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
..+++|++..-|+-|-..-++++|.+|+++|++|.++..+.
T Consensus 4 ~g~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 4 RGRLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CCCEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CceEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 34689999999999999999999999999999998877654
No 95
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=65.31 E-value=6.5 Score=33.33 Aligned_cols=46 Identities=26% Similarity=0.211 Sum_probs=35.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCccccccc
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDH-KGLKVTLVTTYFISKSLH 57 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~~~~~~~~ 57 (468)
.+++||++...|+.+=+. ...+.++|.+ +|++|.++.++.....+.
T Consensus 17 l~~k~IllgvTGsiaa~k-~~~lv~~L~~~~g~~V~vv~T~~A~~fi~ 63 (206)
T 1qzu_A 17 ERKFHVLVGVTGSVAALK-LPLLVSKLLDIPGLEVAVVTTERAKHFYS 63 (206)
T ss_dssp CSSEEEEEEECSSGGGGT-HHHHHHHHC---CEEEEEEECTGGGGSSC
T ss_pred cCCCEEEEEEeChHHHHH-HHHHHHHHhcccCCEEEEEECHhHHHHhC
Confidence 345789887777777544 5899999999 899999999988887776
No 96
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=65.07 E-value=50 Score=29.42 Aligned_cols=40 Identities=15% Similarity=0.191 Sum_probs=30.8
Q ss_pred CcEEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012194 13 LVHCLVLS--YPAQGHINPLLQFAKRLDHKGLKVTLVTTYFI 52 (468)
Q Consensus 13 ~~~il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 52 (468)
+.|+++++ -|+-|--.-...||..|++.|.+|.++-.+..
T Consensus 91 ~~kvI~vts~kgG~GKTtva~nLA~~lA~~G~rVLLID~D~~ 132 (286)
T 3la6_A 91 QNNVLMMTGVSPSIGMTFVCANLAAVISQTNKRVLLIDCDMR 132 (286)
T ss_dssp TCCEEEEEESSSSSSHHHHHHHHHHHHHTTTCCEEEEECCTT
T ss_pred CCeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeccCC
Confidence 34555444 34668888999999999999999999976543
No 97
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=65.01 E-value=8.3 Score=34.00 Aligned_cols=43 Identities=9% Similarity=-0.142 Sum_probs=37.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccc
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFIS 53 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~ 53 (468)
.++.+|++.+.++..|-....-++..|..+|++|.+++.....
T Consensus 121 ~~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~ 163 (258)
T 2i2x_B 121 KTKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPA 163 (258)
T ss_dssp CCSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCS
T ss_pred CCCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCH
Confidence 3467999999999999999999999999999999988765433
No 98
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=64.84 E-value=9 Score=35.90 Aligned_cols=36 Identities=19% Similarity=0.119 Sum_probs=30.7
Q ss_pred cEEEEEcCC-CccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 14 VHCLVLSYP-AQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 14 ~~il~~~~~-~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
|+|++++.- +-|-..-..++|..|+++|++|.++..
T Consensus 2 ~~i~~~~gkGG~GKTt~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 2 ALILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp CEEEEEECSBHHHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred cEEEEEeCCCCCcHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 578776654 459999999999999999999999988
No 99
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=64.73 E-value=7.6 Score=32.97 Aligned_cols=43 Identities=12% Similarity=-0.056 Sum_probs=37.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcccc
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISK 54 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~ 54 (468)
++.+|++.+.++..|-....-++..|..+|++|.+++.....+
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~ 129 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPG 129 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHH
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHH
Confidence 3568999999999999999999999999999999988764433
No 100
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=64.70 E-value=3.7 Score=36.32 Aligned_cols=53 Identities=15% Similarity=0.213 Sum_probs=39.4
Q ss_pred ccCcceeeecCCcchHHHHHHc---CCceeecccccchhHHHHHHHhhhcceeEecCCCCCccCHHHHHHHHHHHhcC
Q 012194 350 HEAAGCFLTHCGWNSTMEALSL---GVPMVAMPQWSDQSTNGKYIMDVWKMGLKVPADEKGIVRREAIAHCISEILEG 424 (468)
Q Consensus 350 ~~~~~~~I~HgG~~s~~Eal~~---GvP~l~~P~~~DQ~~na~~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~ 424 (468)
.+++ +|+=||=||+++++.. ++|++.++.. .. | .+. .+.++++.+++..++++
T Consensus 41 ~~D~--vv~~GGDGTll~~a~~~~~~~PilGIn~G-----------~~---G-fl~-----~~~~~~~~~al~~i~~g 96 (258)
T 1yt5_A 41 TADL--IVVVGGDGTVLKAAKKAADGTPMVGFKAG-----------RL---G-FLT-----SYTLDEIDRFLEDLRNW 96 (258)
T ss_dssp CCSE--EEEEECHHHHHHHHTTBCTTCEEEEEESS-----------SC---C-SSC-----CBCGGGHHHHHHHHHTT
T ss_pred CCCE--EEEEeCcHHHHHHHHHhCCCCCEEEEECC-----------CC---C-ccC-----cCCHHHHHHHHHHHHcC
Confidence 5677 9999999999999887 8898888732 11 2 122 34577888888888876
No 101
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=63.20 E-value=7.3 Score=33.03 Aligned_cols=45 Identities=11% Similarity=0.034 Sum_probs=30.9
Q ss_pred CCcEEEEEcCCCccCHHH-HHHHHHHHHhCCCeEEEEeCCccccccc
Q 012194 12 RLVHCLVLSYPAQGHINP-LLQFAKRLDHKGLKVTLVTTYFISKSLH 57 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p-~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 57 (468)
+.+||++...|+ +..+- ...+.+.|.++|++|.++.++.....+.
T Consensus 4 ~~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~~vl~ 49 (207)
T 3mcu_A 4 KGKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQSTNT 49 (207)
T ss_dssp TTCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC-------
T ss_pred CCCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHHHHHH
Confidence 346898876666 45664 7899999999999999999887764443
No 102
>2ywr_A Phosphoribosylglycinamide formyltransferase; rossmann fold, structural genomics, NPPSFA; 1.77A {Aquifex aeolicus}
Probab=62.63 E-value=21 Score=30.36 Aligned_cols=104 Identities=13% Similarity=0.060 Sum_probs=56.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCC--eEEEEeCCcc----ccccccCCCCCCCCeEEEEcCCCCCCCCCCccccH
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGL--KVTLVTTYFI----SKSLHRDSSSSSASIALEAISDGYDQGGSAQAESI 87 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh--~Vt~~~~~~~----~~~~~~~~~~~~~~i~f~~~~~~~~~~~~~~~~~~ 87 (468)
|||+|+..|+.. -+.++.++|.+.+| +|..+.+... .+.+++. |+.+..++.. .+. +
T Consensus 2 ~rI~vl~SG~g~---~~~~~l~~l~~~~~~~~i~~Vvs~~~~~~~~~~A~~~------gIp~~~~~~~----~~~---~- 64 (216)
T 2ywr_A 2 LKIGVLVSGRGS---NLQAIIDAIESGKVNASIELVISDNPKAYAIERCKKH------NVECKVIQRK----EFP---S- 64 (216)
T ss_dssp EEEEEEECSCCH---HHHHHHHHHHTTSSCEEEEEEEESCTTCHHHHHHHHH------TCCEEECCGG----GSS---S-
T ss_pred CEEEEEEeCCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCChHHHHHHHHc------CCCEEEeCcc----ccc---c-
Confidence 589988776543 35667778888888 7765554322 1233332 7777665421 111 1
Q ss_pred HHHHHHHHHhchHHHHHHHHHhcCCCCCccEEEeCCCc-chHHHHHHHcCCceEEEcccc
Q 012194 88 EAYLEKFWQIGPRSLCELVEKMNGSVVPVDCIVYDSFL-PWALDVAKKFGLVGAAFLTQS 146 (468)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~~~-~~~~~~A~~lgiP~i~~~~~~ 146 (468)
.....+.+.+.++++ .+|+||+-.+. .....+-+.....++-+.++.
T Consensus 65 -------r~~~~~~~~~~l~~~-----~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSL 112 (216)
T 2ywr_A 65 -------KKEFEERMALELKKK-----GVELVVLAGFMRILSHNFLKYFPNKVINIHPSL 112 (216)
T ss_dssp -------HHHHHHHHHHHHHHT-----TCCEEEESSCCSCCCHHHHTTSTTCEEEEESSC
T ss_pred -------hhhhhHHHHHHHHhc-----CCCEEEEeCchhhCCHHHHhhccCCeEEEcCCc
Confidence 011122233444443 25999987764 334455555556677765543
No 103
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=62.30 E-value=8.4 Score=33.82 Aligned_cols=48 Identities=13% Similarity=-0.025 Sum_probs=37.2
Q ss_pred cCCCcEEEEEcCC---CccCHHHHHHHHHHHHhCCCeEEEEeCCccccccc
Q 012194 10 SCRLVHCLVLSYP---AQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLH 57 (468)
Q Consensus 10 ~~~~~~il~~~~~---~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 57 (468)
.|..||.+|++.| +-|-=.-.-.|+..|..||++|+..=-+.+.+.-.
T Consensus 19 ~~~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPYlNvD~ 69 (295)
T 2vo1_A 19 YFQSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYINIDA 69 (295)
T ss_dssp --CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECSSCCC-
T ss_pred ccccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecccceecCC
Confidence 3678999999976 44777788999999999999999987766654444
No 104
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=61.62 E-value=4.6 Score=36.04 Aligned_cols=53 Identities=8% Similarity=0.087 Sum_probs=38.7
Q ss_pred ccCcceeeecCCcchHHHHHHc------CCceeecccccchhHHHHHHHhhhcceeEecCCCCCccCHHHHHHHHHHHhc
Q 012194 350 HEAAGCFLTHCGWNSTMEALSL------GVPMVAMPQWSDQSTNGKYIMDVWKMGLKVPADEKGIVRREAIAHCISEILE 423 (468)
Q Consensus 350 ~~~~~~~I~HgG~~s~~Eal~~------GvP~l~~P~~~DQ~~na~~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~ 423 (468)
.+++ +|.=||=||++++... ++|++.+|.. .+ | .+. ++.++++.+++..+++
T Consensus 35 ~~D~--vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G-----------~l-g---fl~-----~~~~~~~~~~l~~l~~ 92 (272)
T 2i2c_A 35 EPEI--VISIGGDGTFLSAFHQYEERLDEIAFIGIHTG-----------HL-G---FYA-----DWRPAEADKLVKLLAK 92 (272)
T ss_dssp SCSE--EEEEESHHHHHHHHHHTGGGTTTCEEEEEESS-----------SC-C---SSC-----CBCGGGHHHHHHHHHT
T ss_pred CCCE--EEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC-----------CC-C---cCC-----cCCHHHHHHHHHHHHc
Confidence 4577 9999999999999875 8999998841 11 2 122 3456778888888876
Q ss_pred C
Q 012194 424 G 424 (468)
Q Consensus 424 ~ 424 (468)
+
T Consensus 93 g 93 (272)
T 2i2c_A 93 G 93 (272)
T ss_dssp T
T ss_pred C
Confidence 5
No 105
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=61.36 E-value=8.9 Score=31.73 Aligned_cols=43 Identities=9% Similarity=0.050 Sum_probs=34.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccc
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLH 57 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 57 (468)
.||++...|+.|=+ =...+.++|.++|++|.++.++.....+.
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi~ 45 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFIN 45 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTSC
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHHH
Confidence 37887777766655 57899999999999999999988777665
No 106
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=61.21 E-value=53 Score=27.88 Aligned_cols=102 Identities=15% Similarity=0.089 Sum_probs=55.4
Q ss_pred hHhHhhhcCCCCceEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEEeecchH-HH
Q 012194 269 SCIKWLNDRAKGSVVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQL-EV 347 (468)
Q Consensus 269 ~~~~~l~~~~~~~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~-~l 347 (468)
++-++|...+ ..+||-|... -......++..+.+-++|-+++.... +.++.........++...+.. .+
T Consensus 36 ~lg~~LA~~G---~~vVsGGg~~----GiM~aa~~gAl~~GG~tiGVlP~~~~---~~e~~~~~~~~~~~~~~f~~Rk~~ 105 (215)
T 2a33_A 36 DLGNELVSRN---IDLVYGGGSI----GLMGLVSQAVHDGGRHVIGIIPKTLM---PRELTGETVGEVRAVADMHQRKAE 105 (215)
T ss_dssp HHHHHHHHTT---CEEEECCCSS----HHHHHHHHHHHHTTCCEEEEEESSCC-----------CCEEEEESSHHHHHHH
T ss_pred HHHHHHHHCC---CEEEECCChh----hHhHHHHHHHHHcCCcEEEEcchHhc---chhhccCCCCceeecCCHHHHHHH
Confidence 3445565542 5666655531 24455555555666666666644311 111111111234556667754 55
Q ss_pred hcccCcceeeecCCcchHHHHHH---------cCCceeeccc
Q 012194 348 LAHEAAGCFLTHCGWNSTMEALS---------LGVPMVAMPQ 380 (468)
Q Consensus 348 L~~~~~~~~I~HgG~~s~~Eal~---------~GvP~l~~P~ 380 (468)
+..-+-..++--||.||+-|... +++|++.+-.
T Consensus 106 ~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 106 MAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp HHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred HHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 54333346778899999988762 4899988764
No 107
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=60.35 E-value=9.3 Score=31.85 Aligned_cols=43 Identities=19% Similarity=0.121 Sum_probs=36.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccc
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLH 57 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 57 (468)
+||++...|+.|-+ =...+.++|.++|++|.++.++.....+.
T Consensus 2 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~ 44 (189)
T 2ejb_A 2 QKIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLK 44 (189)
T ss_dssp CEEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHH
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhh
Confidence 48998888887754 57899999999999999999988877776
No 108
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=59.38 E-value=5.1 Score=33.63 Aligned_cols=44 Identities=7% Similarity=-0.042 Sum_probs=35.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccc
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLH 57 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 57 (468)
..||++...|+.|=.. ...+.+.|.++|++|.++.++.....+.
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~fi~ 51 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDLIP 51 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHHSC
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHHHH
Confidence 4589887777776665 7899999999999999999887766554
No 109
>1fmt_A Methionyl-tRNA FMet formyltransferase; initiator tRNA, translation initiation; 2.00A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 2fmt_A* 3r8x_A
Probab=59.04 E-value=36 Score=30.87 Aligned_cols=34 Identities=18% Similarity=0.103 Sum_probs=23.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
++|||+|+..+..+ ....++|.+.||+|..+.+.
T Consensus 2 ~~mrIvf~Gt~~fa-----~~~L~~L~~~~~~i~~Vvt~ 35 (314)
T 1fmt_A 2 ESLRIIFAGTPDFA-----ARHLDALLSSGHNVVGVFTQ 35 (314)
T ss_dssp CCCEEEEEECSHHH-----HHHHHHHHHTTCEEEEEECC
T ss_pred CCCEEEEEecCHHH-----HHHHHHHHHCCCcEEEEEeC
Confidence 46999998876432 34456777789999866553
No 110
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=58.84 E-value=5.6 Score=36.64 Aligned_cols=41 Identities=17% Similarity=0.186 Sum_probs=31.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccc
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLH 57 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 57 (468)
..|||+++..|+.| ..+|..|++.||+|+++......+.+.
T Consensus 2 ~~mkI~IiGaG~~G-----~~~a~~L~~~g~~V~~~~r~~~~~~~~ 42 (335)
T 3ghy_A 2 SLTRICIVGAGAVG-----GYLGARLALAGEAINVLARGATLQALQ 42 (335)
T ss_dssp CCCCEEEESCCHHH-----HHHHHHHHHTTCCEEEECCHHHHHHHH
T ss_pred CCCEEEEECcCHHH-----HHHHHHHHHCCCEEEEEEChHHHHHHH
Confidence 35899999888777 457889999999999998643333444
No 111
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=58.75 E-value=19 Score=31.03 Aligned_cols=30 Identities=17% Similarity=0.174 Sum_probs=22.4
Q ss_pred ccEEE-eCCCc-chHHHHHHHcCCceEEEccc
Q 012194 116 VDCIV-YDSFL-PWALDVAKKFGLVGAAFLTQ 145 (468)
Q Consensus 116 ~DlVI-~D~~~-~~~~~~A~~lgiP~i~~~~~ 145 (468)
||+|| +|+.. ..+..=|.++|||+|.+.-+
T Consensus 158 Pdll~v~Dp~~e~~ai~EA~~l~IPvIaivDT 189 (231)
T 3bbn_B 158 PDIVIIVDQQEEYTALRECITLGIPTICLIDT 189 (231)
T ss_dssp CSEEEESCTTTTHHHHHHHHTTTCCEEECCCS
T ss_pred CCEEEEeCCccccHHHHHHHHhCCCEEEEecC
Confidence 48877 56654 44777899999999997643
No 112
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=58.70 E-value=10 Score=32.42 Aligned_cols=44 Identities=7% Similarity=-0.021 Sum_probs=37.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcccc
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISK 54 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~ 54 (468)
.++.||++.+.++-.|-....-++..|..+|++|.+++.....+
T Consensus 90 ~~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e 133 (215)
T 3ezx_A 90 EEAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNE 133 (215)
T ss_dssp --CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHH
T ss_pred CCCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHH
Confidence 34579999999999999999999999999999999988754443
No 113
>2hy5_A Putative sulfurtransferase DSRE; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_A
Probab=57.97 E-value=21 Score=27.40 Aligned_cols=44 Identities=16% Similarity=0.089 Sum_probs=32.9
Q ss_pred cEEEE-EcCCCccC--HHHHHHHHHHHHhCCCeE-EEEeCCccccccc
Q 012194 14 VHCLV-LSYPAQGH--INPLLQFAKRLDHKGLKV-TLVTTYFISKSLH 57 (468)
Q Consensus 14 ~~il~-~~~~~~GH--~~p~l~La~~L~~rGh~V-t~~~~~~~~~~~~ 57 (468)
||+++ ++.+.+|+ ....+.+|..+.+.||+| +++-..+......
T Consensus 1 mk~~iiv~~~p~~~~~~~~al~~a~a~~~~g~~v~~vff~~dGV~~~~ 48 (130)
T 2hy5_A 1 MKFALQINEGPYQHQASDSAYQFAKAALEKGHEIFRVFFYHDGVNNST 48 (130)
T ss_dssp CEEEEEECSCTTTSTHHHHHHHHHHHHHHTTCEEEEEEECGGGGGGGB
T ss_pred CEEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCeeCEEEEechHHHHHh
Confidence 56654 55555654 456788999999999999 9888777776665
No 114
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=57.85 E-value=20 Score=27.73 Aligned_cols=45 Identities=9% Similarity=-0.023 Sum_probs=32.9
Q ss_pred CcEEEE-EcCC--CccCHHHHHHHHHHHHhCCCeEEEEeCCccccccc
Q 012194 13 LVHCLV-LSYP--AQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLH 57 (468)
Q Consensus 13 ~~~il~-~~~~--~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 57 (468)
.+|++| ++.+ +.......+.+|...++.||+|+++...+....+.
T Consensus 15 ~~kl~ii~~sgP~~~~~~~~al~lA~~A~a~g~eV~vFf~~dGV~~l~ 62 (134)
T 3mc3_A 15 XXXILIVVTHGPEDLDRTYAPLFMASISASMEYETSVFFMIXGPXLLD 62 (134)
T ss_dssp CCEEEEEECCCGGGTHHHHHHHHHHHHHHHTTCEEEEEECTTGGGGGB
T ss_pred cceEEEEEccCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEeCcHHHHh
Confidence 356664 4444 34566788889999999999999888777665554
No 115
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=57.20 E-value=83 Score=26.14 Aligned_cols=96 Identities=15% Similarity=0.112 Sum_probs=56.3
Q ss_pred hhHhHhhhcCCCCceEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEE--eecch-
Q 012194 268 ESCIKWLNDRAKGSVVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVV--NWCPQ- 344 (468)
Q Consensus 268 ~~~~~~l~~~~~~~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~--~~vpq- 344 (468)
.++-++|...+ ..+||-|.. -......++..+.+-++|-+++.... ...+ ....+. ...++
T Consensus 48 ~~lg~~LA~~G---~~vVsGg~~-----GiM~aa~~gAl~~GG~~iGVlP~e~~---~~~~-----~~~~~~~~~~f~~R 111 (195)
T 1rcu_A 48 LELGRTLAKKG---YLVFNGGRD-----GVMELVSQGVREAGGTVVGILPDEEA---GNPY-----LSVAVKTGLDFQMR 111 (195)
T ss_dssp HHHHHHHHHTT---CEEEECCSS-----HHHHHHHHHHHHTTCCEEEEESTTCC---CCTT-----CSEEEECCCCHHHH
T ss_pred HHHHHHHHHCC---CEEEeCCHH-----HHHHHHHHHHHHcCCcEEEEeCCccc---CCCC-----cceeeecCCCHHHH
Confidence 44556776643 566663332 35556666666667677777754211 1111 233344 34553
Q ss_pred HHHhc-ccCcceeeecCCcchHHH---HHHcCCceeeccc
Q 012194 345 LEVLA-HEAAGCFLTHCGWNSTME---ALSLGVPMVAMPQ 380 (468)
Q Consensus 345 ~~lL~-~~~~~~~I~HgG~~s~~E---al~~GvP~l~~P~ 380 (468)
..++. .+++ .++--||.||+.| ++.+|+|+++++.
T Consensus 112 k~~m~~~sda-~IvlpGG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 112 SFVLLRNADV-VVSIGGEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp HHHHHTTCSE-EEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred HHHHHHhCCE-EEEecCCCcHHHHHHHHHhcCCCEEEECC
Confidence 34444 4444 5777899998766 5779999999963
No 116
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=56.93 E-value=63 Score=30.49 Aligned_cols=96 Identities=18% Similarity=0.126 Sum_probs=49.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEEcCCCCCCCCCCccccHHHHH
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEAISDGYDQGGSAQAESIEAYL 91 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~~~~~~~~~~~~~~~~~~~ 91 (468)
+..||++++.+.. + . .+.++.++.|++|+++.......... ...--.+..++.. .+.....
T Consensus 4 ~~k~l~Il~~~~~-~-~---~i~~aa~~lG~~vv~v~~~~~~~~~~-----~~~~d~~~~~~~~---------~d~~~~~ 64 (425)
T 3vot_A 4 RNKNLAIICQNKH-L-P---FIFEEAERLGLKVTFFYNSAEDFPGN-----LPAVERCVPLPLF---------EDEEAAM 64 (425)
T ss_dssp CCCEEEEECCCTT-C-C---HHHHHHHHTTCEEEEEEETTSCCCCS-----CTTEEEEEEECTT---------TCHHHHH
T ss_pred CCcEEEEECCChh-H-H---HHHHHHHHCCCEEEEEECCCcccccC-----HhhccEEEecCCC---------CCHHHHH
Confidence 3467777765433 2 1 35677778899999886543221111 0112234444421 1112121
Q ss_pred HHHHHhchHHHHHHHHHhcCCCCCccEEEeCC--CcchHHHHHHHcCCce
Q 012194 92 EKFWQIGPRSLCELVEKMNGSVVPVDCIVYDS--FLPWALDVAKKFGLVG 139 (468)
Q Consensus 92 ~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~--~~~~~~~~A~~lgiP~ 139 (468)
+ .+..+..+ .++|.|+.-. ....+..+|+.+|+|.
T Consensus 65 ~--------~~~~~~~~-----~~id~V~~~~e~~~~~~a~l~e~lglpg 101 (425)
T 3vot_A 65 D--------VVRQTFVE-----FPFDGVMTLFEPALPFTAKAAEALNLPG 101 (425)
T ss_dssp H--------HHHHHHHH-----SCCSEEECCCGGGHHHHHHHHHHTTCSS
T ss_pred H--------HHHHhhhh-----cCCCEEEECCchhHHHHHHHHHHcCCCC
Confidence 1 12223222 3579998532 2344677889999994
No 117
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=56.82 E-value=10 Score=29.16 Aligned_cols=33 Identities=21% Similarity=0.339 Sum_probs=24.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
.|||+++.. |.+-. .+++.|.++||+|+++...
T Consensus 4 ~m~i~IiG~---G~iG~--~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGI---GRVGY--TLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECC---SHHHH--HHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC---CHHHH--HHHHHHHhCCCeEEEEECC
Confidence 479988843 55543 5788999999999988753
No 118
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=56.73 E-value=4.8 Score=36.62 Aligned_cols=56 Identities=16% Similarity=0.208 Sum_probs=37.0
Q ss_pred HhcccCcceeeecCCcchHHHHHHc----CCceeecccccchhHHHHHHHhhhcceeEecCCCCCccCHHHHHHHHHHHh
Q 012194 347 VLAHEAAGCFLTHCGWNSTMEALSL----GVPMVAMPQWSDQSTNGKYIMDVWKMGLKVPADEKGIVRREAIAHCISEIL 422 (468)
Q Consensus 347 lL~~~~~~~~I~HgG~~s~~Eal~~----GvP~l~~P~~~DQ~~na~~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll 422 (468)
....+++ +|.-||=||+++++.. ++|++.++.. .. | .+. ++.++++.+++..++
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~G-----------~~---g-fl~-----~~~~~~~~~~~~~i~ 129 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNLG-----------RI---G-FLA-----EAEAEAIDAVLEHVV 129 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEECS-----------SC---C-SSC-----SEEGGGHHHHHHHHH
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeCC-----------CC---c-cCc-----ccCHHHHHHHHHHHH
Confidence 4456788 9999999999999865 8999988742 11 2 121 234567777777777
Q ss_pred cC
Q 012194 423 EG 424 (468)
Q Consensus 423 ~~ 424 (468)
++
T Consensus 130 ~g 131 (307)
T 1u0t_A 130 AQ 131 (307)
T ss_dssp HT
T ss_pred cC
Confidence 65
No 119
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=56.19 E-value=8.5 Score=33.33 Aligned_cols=38 Identities=13% Similarity=-0.041 Sum_probs=32.5
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
|||.|..-|+-|=-.-...||..|+++|++|.++-.+.
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 68988666677889999999999999999999887654
No 120
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=55.67 E-value=8.5 Score=34.63 Aligned_cols=70 Identities=11% Similarity=-0.010 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEEeecchHHHhcccCcceeeecCCcchHHHHHHc----
Q 012194 296 EEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQLEVLAHEAAGCFLTHCGWNSTMEALSL---- 371 (468)
Q Consensus 296 ~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~I~HgG~~s~~Eal~~---- 371 (468)
+....+.+.+.+.+..+.+..........+ + . .......+-..+++ +|+=||=||+++++..
T Consensus 21 ~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~-~--------~---~~~~~~~~~~~~D~--vi~~GGDGT~l~a~~~~~~~ 86 (292)
T 2an1_A 21 TTHEMLYRWLCDQGYEVIVEQQIAHELQLK-N--------V---PTGTLAEIGQQADL--AVVVGGDGNMLGAARTLARY 86 (292)
T ss_dssp CHHHHHHHHHHHTTCEEEEEHHHHHHTTCS-S--------C---CEECHHHHHHHCSE--EEECSCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHCCCEEEEecchhhhcccc-c--------c---cccchhhcccCCCE--EEEEcCcHHHHHHHHHhhcC
Confidence 346667777888887765432110000000 0 0 01123344456788 9999999999999853
Q ss_pred CCceeecc
Q 012194 372 GVPMVAMP 379 (468)
Q Consensus 372 GvP~l~~P 379 (468)
++|++.++
T Consensus 87 ~~P~lGI~ 94 (292)
T 2an1_A 87 DINVIGIN 94 (292)
T ss_dssp SCEEEEBC
T ss_pred CCCEEEEE
Confidence 78999887
No 121
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=55.12 E-value=40 Score=28.67 Aligned_cols=100 Identities=13% Similarity=-0.004 Sum_probs=56.5
Q ss_pred hHhHhhhcCCCCceEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeCCcc-CCCCcchhhhccCCeEEEeecchH-H
Q 012194 269 SCIKWLNDRAKGSVVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRESEQ-AKLPENFSDETSQKGLVVNWCPQL-E 346 (468)
Q Consensus 269 ~~~~~l~~~~~~~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~nv~~~~~vpq~-~ 346 (468)
++-++|..++ ..+|+-|.-. -.+....++..+.+-++|=+++..-. ...+.+ --.++.+++..+.. .
T Consensus 32 ~lg~~LA~~g---~~lV~GGg~~----GlM~aa~~gA~~~GG~~iGv~p~~l~~~e~~~~----~~~~~~~~~~~~~Rk~ 100 (216)
T 1ydh_A 32 ELGNELVKRK---IDLVYGGGSV----GLMGLISRRVYEGGLHVLGIIPKALMPIEISGE----TVGDVRVVADMHERKA 100 (216)
T ss_dssp HHHHHHHHTT---CEEEECCCSS----HHHHHHHHHHHHTTCCEEEEEEGGGHHHHCCSS----CCSEEEEESSHHHHHH
T ss_pred HHHHHHHHCC---CEEEECCCcc----cHhHHHHHHHHHcCCcEEEEechhcCccccccC----CCCcccccCCHHHHHH
Confidence 3445666543 5556655531 35566666666666676655542100 001111 01235566666654 4
Q ss_pred H-hcccCcceeeecCCcchHHHHH---------HcCCceeeccc
Q 012194 347 V-LAHEAAGCFLTHCGWNSTMEAL---------SLGVPMVAMPQ 380 (468)
Q Consensus 347 l-L~~~~~~~~I~HgG~~s~~Eal---------~~GvP~l~~P~ 380 (468)
+ ...+++ +++--||.||+-|.. .+++|++.+-.
T Consensus 101 ~~~~~sda-~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 101 AMAQEAEA-FIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp HHHHHCSE-EEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred HHHHhCCE-EEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 4 445554 577889999988876 47999998863
No 122
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=54.81 E-value=8.5 Score=35.39 Aligned_cols=33 Identities=27% Similarity=0.298 Sum_probs=28.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
.|||.|+..|..| ..+|..|.+.||+|+++...
T Consensus 14 ~~kI~iIG~G~mG-----~ala~~L~~~G~~V~~~~r~ 46 (335)
T 1z82_A 14 EMRFFVLGAGSWG-----TVFAQMLHENGEEVILWARR 46 (335)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECcCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 4899999888777 47889999999999998753
No 123
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=54.64 E-value=1e+02 Score=26.38 Aligned_cols=38 Identities=21% Similarity=0.255 Sum_probs=29.5
Q ss_pred cEEEEE-c-CCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 14 VHCLVL-S-YPAQGHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 14 ~~il~~-~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
+||+.+ + -|+-|--.-...||..|+++|++|.++=...
T Consensus 2 ~~vi~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (260)
T 3q9l_A 2 ARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAI 41 (260)
T ss_dssp CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCcEEEEECCC
Confidence 355544 3 3455889999999999999999999987654
No 124
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=54.00 E-value=15 Score=29.12 Aligned_cols=35 Identities=14% Similarity=0.120 Sum_probs=26.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
...++|+++..|..| ..+++.|.++|++|+++...
T Consensus 17 ~~~~~v~IiG~G~iG-----~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLG-----SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred cCCCcEEEECCCHHH-----HHHHHHHHhCCCeEEEEECC
Confidence 456899988654434 55788999999999998754
No 125
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=53.73 E-value=13 Score=33.64 Aligned_cols=46 Identities=11% Similarity=0.167 Sum_probs=34.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEE
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEA 71 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~ 71 (468)
|||+++..|+.|- .+|..|++.||+|+++.... .+.+.+. |+....
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~~~------g~~~~~ 48 (312)
T 3hn2_A 3 LRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD-YEAIAGN------GLKVFS 48 (312)
T ss_dssp -CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT-HHHHHHT------CEEEEE
T ss_pred CEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc-HHHHHhC------CCEEEc
Confidence 7999999998884 46889999999999998765 3455432 666554
No 126
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=52.92 E-value=14 Score=31.30 Aligned_cols=33 Identities=18% Similarity=0.205 Sum_probs=23.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
|||++... .|.+- ..|+++|.++||+|+.++-.
T Consensus 1 MkilVtGa--tG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (224)
T 3h2s_A 1 MKIAVLGA--TGRAG--SAIVAEARRRGHEVLAVVRD 33 (224)
T ss_dssp CEEEEETT--TSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEcC--CCHHH--HHHHHHHHHCCCEEEEEEec
Confidence 67666543 34333 57889999999999998754
No 127
>1jkx_A GART;, phosphoribosylglycinamide formyltransferase; purine biosynthesis, anti-cancer agent; HET: 138; 1.60A {Escherichia coli} SCOP: c.65.1.1 PDB: 1cdd_A 1cde_A* 1c2t_A* 1grc_A 1gar_A* 2gar_A 3gar_A 1c3e_A*
Probab=52.82 E-value=63 Score=27.28 Aligned_cols=104 Identities=13% Similarity=0.069 Sum_probs=57.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCccc----cccccCCCCCCCCeEEEEcCCCCCCCCCCccccH
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHK--GLKVTLVTTYFIS----KSLHRDSSSSSASIALEAISDGYDQGGSAQAESI 87 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~----~~~~~~~~~~~~~i~f~~~~~~~~~~~~~~~~~~ 87 (468)
|||+++..+..+ -+.+|.+.+.+. +|+|..+.+.... +.+++ .|+.+..++.. .+. +-
T Consensus 1 ~ri~vl~Sg~gs---nl~ali~~~~~~~~~~~i~~Vis~~~~~~~~~~A~~------~gIp~~~~~~~----~~~---~r 64 (212)
T 1jkx_A 1 MNIVVLISGNGS---NLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQ------AGIATHTLIAS----AFD---SR 64 (212)
T ss_dssp CEEEEEESSCCH---HHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHH------TTCEEEECCGG----GCS---SH
T ss_pred CEEEEEEECCcH---HHHHHHHHHHcCCCCceEEEEEeCCCchHHHHHHHH------cCCcEEEeCcc----ccc---ch
Confidence 588887777554 356677777665 6888766654322 23343 37888776421 011 10
Q ss_pred HHHHHHHHHhchHHHHHHHHHhcCCCCCccEEEeCCCc-chHHHHHHHcCCceEEEcccc
Q 012194 88 EAYLEKFWQIGPRSLCELVEKMNGSVVPVDCIVYDSFL-PWALDVAKKFGLVGAAFLTQS 146 (468)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~~~-~~~~~~A~~lgiP~i~~~~~~ 146 (468)
..+.+.+.+.++++ . +|+||+-.+. .....+-......++-+.++.
T Consensus 65 --------~~~~~~~~~~l~~~----~-~Dliv~agy~~il~~~~l~~~~~~~iNiHpSl 111 (212)
T 1jkx_A 65 --------EAYDRELIHEIDMY----A-PDVVVLAGFMRILSPAFVSHYAGRLLNIHPSL 111 (212)
T ss_dssp --------HHHHHHHHHHHGGG----C-CSEEEESSCCSCCCHHHHHHTTTSEEEEESSC
T ss_pred --------hhccHHHHHHHHhc----C-CCEEEEeChhhhCCHHHHhhccCCEEEEccCc
Confidence 11112233333333 2 5999988765 434555666777777776544
No 128
>4ehi_A Bifunctional purine biosynthesis protein PURH; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE BTB; 2.28A {Campylobacter jejuni subsp}
Probab=52.81 E-value=13 Score=36.00 Aligned_cols=50 Identities=22% Similarity=0.333 Sum_probs=33.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEEcCC
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEAISD 74 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~~ 74 (468)
-+++++.. .+=.-++.+|+.|.+.|+++. ++..-...+++. |+.+..+.+
T Consensus 24 i~raLISV----~DK~glv~~Ak~L~~lGfeI~--ATgGTak~L~e~------GI~v~~V~k 73 (534)
T 4ehi_A 24 AMRALLSV----SDKEGIVEFGKELENLGFEIL--STGGTFKLLKEN------GIKVIEVSD 73 (534)
T ss_dssp CCEEEEEE----SSCTTHHHHHHHHHHTTCEEE--ECHHHHHHHHHT------TCCCEECBC
T ss_pred CcEEEEEE----cccccHHHHHHHHHHCCCEEE--EccHHHHHHHHC------CCceeehhh
Confidence 34555544 234458899999999999875 444555566643 777777753
No 129
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=52.78 E-value=90 Score=25.19 Aligned_cols=141 Identities=16% Similarity=0.131 Sum_probs=78.9
Q ss_pred CceEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEEeecchHHHhcc-----cCcc
Q 012194 280 GSVVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQLEVLAH-----EAAG 354 (468)
Q Consensus 280 ~~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL~~-----~~~~ 354 (468)
+|.|-|-+||.. +....++....++.+|..+-..+-+... .|+. ..++... +++
T Consensus 11 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaHR--~p~~----------------l~~~~~~a~~~g~~V- 69 (170)
T 1xmp_A 11 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAHR--TPDY----------------MFEYAETARERGLKV- 69 (170)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--SHHH----------------HHHHHHHTTTTTCCE-
T ss_pred CCcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEeccC--CHHH----------------HHHHHHHHHhCCCcE-
Confidence 457888888865 5677888899999998775433322211 1111 0133322 445
Q ss_pred eeeecCCcchHHHHHH---cCCceeecccccc-hhHHHHHH--Hh--hhcceeE-ecCCCCCccCHHHHHHHHHHHhcCc
Q 012194 355 CFLTHCGWNSTMEALS---LGVPMVAMPQWSD-QSTNGKYI--MD--VWKMGLK-VPADEKGIVRREAIAHCISEILEGE 425 (468)
Q Consensus 355 ~~I~HgG~~s~~Eal~---~GvP~l~~P~~~D-Q~~na~~l--~~--~~g~G~~-l~~~~~~~~~~~~l~~~i~~ll~~~ 425 (468)
+|.=+|...-+-.+. .-+|+|.+|.... -......+ .+ . |+.+. +..++-+-.++.-+...|. -+.|+
T Consensus 70 -iIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~d~ 146 (170)
T 1xmp_A 70 -IIAGAGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQMPG-GVPVATVAIGKAGSTNAGLLAAQIL-GSFHD 146 (170)
T ss_dssp -EEEEEESSCCHHHHHHTTCCSCEEEEEECCTTTTTHHHHHHHHCCCT-TCCCEECCSSHHHHHHHHHHHHHHH-HTTCH
T ss_pred -EEEECCchhhhHHHHHhccCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCeeEEEecCCcchHHHHHHHHHHH-ccCCH
Confidence 888777654444443 3589999998542 12222222 33 3 44321 1111001234445555553 35665
Q ss_pred cHHHHHHHHHHHHHHHHHHHHc
Q 012194 426 RGKEIRQNAGKWSNFAKEAVAK 447 (468)
Q Consensus 426 ~~~~~~~~a~~~~~~~~~~~~~ 447 (468)
+++++.+.+++..++.+.+
T Consensus 147 ---~l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 147 ---DIHDALELRREAIEKDVRE 165 (170)
T ss_dssp ---HHHHHHHHHHHHHHHHHHC
T ss_pred ---HHHHHHHHHHHHHHHHHHh
Confidence 8999999999988876544
No 130
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=52.58 E-value=14 Score=31.08 Aligned_cols=33 Identities=12% Similarity=0.241 Sum_probs=23.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
|||++... .|.+- ..|+++|.++||+|+.++-.
T Consensus 1 MkvlVtGa--tG~iG--~~l~~~L~~~g~~V~~~~R~ 33 (221)
T 3ew7_A 1 MKIGIIGA--TGRAG--SRILEEAKNRGHEVTAIVRN 33 (221)
T ss_dssp CEEEEETT--TSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CeEEEEcC--CchhH--HHHHHHHHhCCCEEEEEEcC
Confidence 67766543 34333 47889999999999988754
No 131
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=52.09 E-value=9.9 Score=35.15 Aligned_cols=34 Identities=29% Similarity=0.255 Sum_probs=25.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
|+.|||+++..|..|. .+|..|.+.||+|+++..
T Consensus 2 m~~mki~iiG~G~~G~-----~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 2 IESKTYAVLGLGNGGH-----AFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp --CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCcCeEEEECCCHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 3458999998776663 468889999999998865
No 132
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=52.01 E-value=9.8 Score=34.35 Aligned_cols=32 Identities=22% Similarity=0.281 Sum_probs=25.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
.|||+|+..|..|. .+|..|.++||+|+++..
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 3 AMKIAIAGAGAMGS-----RLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp -CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHhCCCcEEEEEC
Confidence 37999998776664 578899999999999875
No 133
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=51.64 E-value=96 Score=25.16 Aligned_cols=140 Identities=12% Similarity=0.112 Sum_probs=75.2
Q ss_pred ceEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEEeecchHHHhcccCcceeeecC
Q 012194 281 SVVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQLEVLAHEAAGCFLTHC 360 (468)
Q Consensus 281 ~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~I~Hg 360 (468)
+.|-|-+||.. +....++....++.+|..+-+.+-+.+. .|+.. .+|+-.. --..+++ +|.=+
T Consensus 8 ~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~SaHR--~p~~~----------~~~~~~a-~~~g~~V--iIa~A 70 (174)
T 3lp6_A 8 PRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSAHR--TPEAM----------FSYARGA-AARGLEV--IIAGA 70 (174)
T ss_dssp CSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--CHHHH----------HHHHHHH-HHHTCCE--EEEEE
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECCCC--CHHHH----------HHHHHHH-HhCCCCE--EEEec
Confidence 45777777765 5677888899999998875444333211 11110 0111000 0034455 88877
Q ss_pred CcchHHHHHH---cCCceeecccccchh-HHHHHH--Hh--hhcceeE-ecCCCCCccCHHHHHHHHHHHhcCccHHHHH
Q 012194 361 GWNSTMEALS---LGVPMVAMPQWSDQS-TNGKYI--MD--VWKMGLK-VPADEKGIVRREAIAHCISEILEGERGKEIR 431 (468)
Q Consensus 361 G~~s~~Eal~---~GvP~l~~P~~~DQ~-~na~~l--~~--~~g~G~~-l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~ 431 (468)
|...-+-++. .-+|+|.+|...... .....+ .+ . |+.+. +..+ +-.++.-+...|.. +.|+ +++
T Consensus 71 G~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~daLlS~vqmp~-GvpVatV~I~--~~~nAa~lAa~Il~-~~d~---~l~ 143 (174)
T 3lp6_A 71 GGAAHLPGMVAAATPLPVIGVPVPLGRLDGLDSLLSIVQMPA-GVPVATVSIG--GAGNAGLLAVRMLG-AANP---QLR 143 (174)
T ss_dssp ESSCCHHHHHHHHCSSCEEEEEECCSSGGGHHHHHHHHCCCT-TCCCEECCTT--CHHHHHHHHHHHHH-TTCH---HHH
T ss_pred CchhhhHHHHHhccCCCEEEeeCCCCCCCCHHHHHHHhhCCC-CCeeEEEEcC--cchHHHHHHHHHHh-CCCH---HHH
Confidence 7553333332 568999999863221 222222 12 2 32221 2211 13455555555543 4565 899
Q ss_pred HHHHHHHHHHHHH
Q 012194 432 QNAGKWSNFAKEA 444 (468)
Q Consensus 432 ~~a~~~~~~~~~~ 444 (468)
++.+.+++..++.
T Consensus 144 ~kl~~~r~~~~~~ 156 (174)
T 3lp6_A 144 ARIVAFQDRLADV 156 (174)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999988888764
No 134
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=51.59 E-value=11 Score=34.94 Aligned_cols=42 Identities=19% Similarity=0.236 Sum_probs=25.3
Q ss_pred hhhhhcCCCcEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCC
Q 012194 5 EKKAASCRLVHCLVLSYPAQGHINPLLQFAKRLDHK-GLKVTLVTTY 50 (468)
Q Consensus 5 ~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~ 50 (468)
+.++..+..|+|++.... |-+- ..|+++|.++ ||+|+.+.-.
T Consensus 16 ~~~~~~m~~~~vlVtGat--G~iG--~~l~~~L~~~~g~~V~~~~r~ 58 (372)
T 3slg_A 16 TQGPGSMKAKKVLILGVN--GFIG--HHLSKRILETTDWEVFGMDMQ 58 (372)
T ss_dssp -------CCCEEEEESCS--SHHH--HHHHHHHHHHSSCEEEEEESC
T ss_pred hcCCcccCCCEEEEECCC--ChHH--HHHHHHHHhCCCCEEEEEeCC
Confidence 344556667788776433 3333 4678899888 9999998754
No 135
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=51.04 E-value=9.8 Score=29.58 Aligned_cols=33 Identities=24% Similarity=0.319 Sum_probs=24.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
.+||+++..|..| ..+++.|.++||+|+++...
T Consensus 6 ~~~v~I~G~G~iG-----~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 6 RYEYIVIGSEAAG-----VGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CCSEEEECCSHHH-----HHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEECCCHHH-----HHHHHHHHHCCCeEEEEECC
Confidence 3578887654323 57899999999999988754
No 136
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=50.85 E-value=60 Score=27.44 Aligned_cols=104 Identities=8% Similarity=0.003 Sum_probs=58.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCccc----cccccCCCCCCCCeEEEEcCCCCCCCCCCccccH
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHK--GLKVTLVTTYFIS----KSLHRDSSSSSASIALEAISDGYDQGGSAQAESI 87 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~----~~~~~~~~~~~~~i~f~~~~~~~~~~~~~~~~~~ 87 (468)
|||.++..|+.+ -+.++.++|.+. +|+|..+.+.... +.+++. |+.+..++.. .+. +.
T Consensus 4 ~ki~vl~sG~g~---~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~------gIp~~~~~~~----~~~---~~ 67 (212)
T 3av3_A 4 KRLAVFASGSGT---NFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARE------NVPAFVFSPK----DYP---SK 67 (212)
T ss_dssp EEEEEECCSSCH---HHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHT------TCCEEECCGG----GSS---SH
T ss_pred cEEEEEEECCcH---HHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHc------CCCEEEeCcc----ccc---ch
Confidence 588877777543 255667778776 7899876654221 223332 7777765421 111 10
Q ss_pred HHHHHHHHHhchHHHHHHHHHhcCCCCCccEEEeCCCc-chHHHHHHHcCCceEEEcccc
Q 012194 88 EAYLEKFWQIGPRSLCELVEKMNGSVVPVDCIVYDSFL-PWALDVAKKFGLVGAAFLTQS 146 (468)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~~~-~~~~~~A~~lgiP~i~~~~~~ 146 (468)
..+.+.+.+.++++ .+|+||.-.+. .....+-......++-+.++.
T Consensus 68 --------~~~~~~~~~~l~~~-----~~Dliv~a~y~~il~~~~l~~~~~~~iNiHpSL 114 (212)
T 3av3_A 68 --------AAFESEILRELKGR-----QIDWIALAGYMRLIGPTLLSAYEGKIVNIHPSL 114 (212)
T ss_dssp --------HHHHHHHHHHHHHT-----TCCEEEESSCCSCCCHHHHHHTTTCEEEEESSC
T ss_pred --------hhhHHHHHHHHHhc-----CCCEEEEchhhhhCCHHHHhhhcCCEEEEecCc
Confidence 11122233444443 25999987765 445556666777777776544
No 137
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=50.65 E-value=16 Score=31.38 Aligned_cols=36 Identities=8% Similarity=0.097 Sum_probs=28.7
Q ss_pred CcEEEEEcCC--CccCHHHHHHHHHHHHhCCCeEEEEe
Q 012194 13 LVHCLVLSYP--AQGHINPLLQFAKRLDHKGLKVTLVT 48 (468)
Q Consensus 13 ~~~il~~~~~--~~GH~~p~l~La~~L~~rGh~Vt~~~ 48 (468)
+||.+|++.. +-|-..-...|++.|+++|++|.++=
T Consensus 3 ~mk~i~Itgt~t~vGKT~vt~~L~~~l~~~G~~V~~~K 40 (228)
T 3of5_A 3 AMKKFFIIGTDTEVGKTYISTKLIEVCEHQNIKSLCLK 40 (228)
T ss_dssp TCEEEEEEESSSSSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCcEEEEEeCCCCCCHHHHHHHHHHHHHHCCCeeEEec
Confidence 4666665544 44899999999999999999999863
No 138
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=50.41 E-value=13 Score=33.96 Aligned_cols=38 Identities=21% Similarity=0.282 Sum_probs=30.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccc
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLH 57 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 57 (468)
|||+++..|+.|- .+|..|++.||+|+++..... +.+.
T Consensus 3 mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~~-~~i~ 40 (320)
T 3i83_A 3 LNILVIGTGAIGS-----FYGALLAKTGHCVSVVSRSDY-ETVK 40 (320)
T ss_dssp CEEEEESCCHHHH-----HHHHHHHHTTCEEEEECSTTH-HHHH
T ss_pred CEEEEECcCHHHH-----HHHHHHHhCCCeEEEEeCChH-HHHH
Confidence 7999998888774 578889999999999987653 4444
No 139
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=50.39 E-value=20 Score=26.58 Aligned_cols=34 Identities=12% Similarity=0.127 Sum_probs=27.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEE
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTL 46 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~ 46 (468)
.|||+++|..|.|+-.-.-.+-+.+.++|.++.+
T Consensus 4 ~mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i 37 (109)
T 2l2q_A 4 SMNILLVCGAGMSTSMLVQRIEKYAKSKNINATI 37 (109)
T ss_dssp CEEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEE
T ss_pred ceEEEEECCChHhHHHHHHHHHHHHHHCCCCeEE
Confidence 4899999999998886566777788888987654
No 140
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=50.29 E-value=19 Score=29.81 Aligned_cols=33 Identities=15% Similarity=0.206 Sum_probs=23.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
|+|+++.. .|-+- ..++++|.++||+|+.++-.
T Consensus 4 ~~ilVtGa--tG~iG--~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 4 KKIAIFGA--TGQTG--LTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CEEEEEST--TSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEEcC--CcHHH--HHHHHHHHHCCCeEEEEEeC
Confidence 67776633 34332 47789999999999998753
No 141
>2d1p_A TUSD, hypothetical UPF0163 protein YHEN; tRNA modification, sulfur transfer, structural genomics, translation; 2.15A {Escherichia coli} SCOP: c.114.1.1
Probab=50.15 E-value=42 Score=26.20 Aligned_cols=46 Identities=17% Similarity=0.158 Sum_probs=34.7
Q ss_pred CCcEEEE-EcCCCccCHHH--HHHHHHHHHhCCCeE-EEEeCCccccccc
Q 012194 12 RLVHCLV-LSYPAQGHINP--LLQFAKRLDHKGLKV-TLVTTYFISKSLH 57 (468)
Q Consensus 12 ~~~~il~-~~~~~~GH~~p--~l~La~~L~~rGh~V-t~~~~~~~~~~~~ 57 (468)
..||++| ++.+.+|.-.. .+.+|+.+.+.||+| .++-..+......
T Consensus 11 ~~~~~~ivv~~~Pyg~~~a~~Al~~A~aala~g~eV~~VFf~~DGV~~a~ 60 (140)
T 2d1p_A 11 GSMRFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVFFYREGVYNAN 60 (140)
T ss_dssp CCCEEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEEECGGGGGGGB
T ss_pred CceEEEEEEcCCCCCcHHHHHHHHHHHHHHHCCCccCEEEEechHHHHHh
Confidence 4588875 66666776655 467799999999999 8887777766665
No 142
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=49.94 E-value=20 Score=30.86 Aligned_cols=26 Identities=31% Similarity=0.402 Sum_probs=20.8
Q ss_pred ccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 24 QGHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 24 ~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
.|.+- .++|++|.++|++|++++.+.
T Consensus 28 SG~mG--~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGHLG--KIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCHHH--HHHHHHHHHTTCEEEEEECTT
T ss_pred CCHHH--HHHHHHHHHCCCEEEEEeCCc
Confidence 55443 568999999999999999765
No 143
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=49.47 E-value=26 Score=26.16 Aligned_cols=65 Identities=12% Similarity=0.104 Sum_probs=46.8
Q ss_pred hcccCcceeeecCCcch---------HHHHHHcCCceeecccccchhHHHHHHHhhhcceeEecCCCCCccCHHHHHHHH
Q 012194 348 LAHEAAGCFLTHCGWNS---------TMEALSLGVPMVAMPQWSDQSTNGKYIMDVWKMGLKVPADEKGIVRREAIAHCI 418 (468)
Q Consensus 348 L~~~~~~~~I~HgG~~s---------~~Eal~~GvP~l~~P~~~DQ~~na~~l~~~~g~G~~l~~~~~~~~~~~~l~~~i 418 (468)
+..+++ +|--.|..| +..|...|+|++++=..+.+. .-..+++. |..+- ..+.+.|.++|
T Consensus 36 I~~~~~--vIvL~G~~t~~s~wv~~EI~~A~~~gkpIigV~~~g~~~-~P~~l~~~---a~~iV-----~Wn~~~I~~aI 104 (111)
T 1eiw_A 36 PEDADA--VIVLAGLWGTRRDEILGAVDLARKSSKPIITVRPYGLEN-VPPELEAV---SSEVV-----GWNPHCIRDAL 104 (111)
T ss_dssp SSSCSE--EEEEGGGTTTSHHHHHHHHHHHTTTTCCEEEECCSSSSC-CCTTHHHH---CSEEE-----CSCHHHHHHHH
T ss_pred cccCCE--EEEEeCCCcCCChHHHHHHHHHHHcCCCEEEEEcCCCCc-CCHHHHhh---Cceec-----cCCHHHHHHHH
Confidence 456888 999999998 677888999998877666541 22225555 33333 56899999999
Q ss_pred HHHhc
Q 012194 419 SEILE 423 (468)
Q Consensus 419 ~~ll~ 423 (468)
+..++
T Consensus 105 ~~~~~ 109 (111)
T 1eiw_A 105 EDALD 109 (111)
T ss_dssp HHHHC
T ss_pred HhccC
Confidence 88764
No 144
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=49.19 E-value=16 Score=29.26 Aligned_cols=36 Identities=19% Similarity=0.133 Sum_probs=29.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
..++++++.|+. +.|++++++.|.++|.+|+++ ...
T Consensus 23 ~~~~llIaGG~G--ItPl~sm~~~l~~~~~~v~l~-g~r 58 (158)
T 3lrx_A 23 FGKILAIGAYTG--IVEVYPIAKAWQEIGNDVTTL-HVT 58 (158)
T ss_dssp CSEEEEEEETTH--HHHHHHHHHHHHHHTCEEEEE-EEC
T ss_pred CCeEEEEEccCc--HHHHHHHHHHHHhcCCcEEEE-EeC
Confidence 357888877653 999999999999999999998 544
No 145
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=49.11 E-value=85 Score=26.62 Aligned_cols=101 Identities=14% Similarity=0.117 Sum_probs=56.6
Q ss_pred hhHhHhhhcCCCCceEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEEeecchH-H
Q 012194 268 ESCIKWLNDRAKGSVVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQL-E 346 (468)
Q Consensus 268 ~~~~~~l~~~~~~~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~-~ 346 (468)
.++-++|...+ ..+||-|.. -......++..+.+-++|-+...-..+..+..+. +....++..+.. .
T Consensus 59 ~~lg~~La~~g---~~lVsGGg~-----GiM~aa~~gAl~~gG~~iGV~~~~P~~~~~~~~~----t~~~~~~~f~~Rk~ 126 (217)
T 1wek_A 59 YRLGRALAEAG---FGVVTGGGP-----GVMEAVNRGAYEAGGVSVGLNIELPHEQKPNPYQ----THALSLRYFFVRKV 126 (217)
T ss_dssp HHHHHHHHHHT---CEEEECSCS-----HHHHHHHHHHHHTTCCEEEEEECCTTCCCCCSCC----SEEEEESCHHHHHH
T ss_pred HHHHHHHHHCC---CEEEeCChh-----hHHHHHHHHHHHcCCCEEEEeeCCcchhhccccC----CcCcccCCHHHHHH
Confidence 34556666543 677777663 3555566666666666665532111112222211 222445666654 5
Q ss_pred HhcccCcceeeecCCcchHHHHHH----------cCCceeeccc
Q 012194 347 VLAHEAAGCFLTHCGWNSTMEALS----------LGVPMVAMPQ 380 (468)
Q Consensus 347 lL~~~~~~~~I~HgG~~s~~Eal~----------~GvP~l~~P~ 380 (468)
++...+-..++--||.||+-|... +++|++.+..
T Consensus 127 ~m~~~sda~IvlpGG~GTL~El~e~lt~~qlg~~~~kPvvll~~ 170 (217)
T 1wek_A 127 LFVRYAVGFVFLPGGFGTLDELSEVLVLLQTEKVHRFPVFLLDR 170 (217)
T ss_dssp HHHHTEEEEEECSCCHHHHHHHHHHHHHHHTTSSCCCCEEEECH
T ss_pred HHHHhCCEEEEeCCCCcHHHHHHHHHHHHhhCCCCCCCEEEeCc
Confidence 554433345777899999888632 5799998863
No 146
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=49.11 E-value=20 Score=31.75 Aligned_cols=34 Identities=29% Similarity=0.475 Sum_probs=25.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
+.|||++.. + |-+- ..|+++|.++||+|+.++-.
T Consensus 2 ~~~~ilVtG--a-G~iG--~~l~~~L~~~g~~V~~~~r~ 35 (286)
T 3gpi_A 2 SLSKILIAG--C-GDLG--LELARRLTAQGHEVTGLRRS 35 (286)
T ss_dssp CCCCEEEEC--C-SHHH--HHHHHHHHHTTCCEEEEECT
T ss_pred CCCcEEEEC--C-CHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 446888773 4 6443 36789999999999998753
No 147
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=49.01 E-value=11 Score=35.31 Aligned_cols=30 Identities=27% Similarity=0.399 Sum_probs=25.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVT 48 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 48 (468)
|||+++..|-.| +.+|-.|+++|++|+++-
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~E 31 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIYE 31 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEEC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEEe
Confidence 899999877656 788999999999999884
No 148
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=48.47 E-value=45 Score=28.14 Aligned_cols=109 Identities=7% Similarity=0.008 Sum_probs=58.7
Q ss_pred hcCCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCc--c--ccccccCCCCCCCCeEEEEcCCCCCCCCCC
Q 012194 9 ASCRLVHCLVLSYPAQGHINPLLQFAKRLDHK--GLKVTLVTTYF--I--SKSLHRDSSSSSASIALEAISDGYDQGGSA 82 (468)
Q Consensus 9 ~~~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~--~--~~~~~~~~~~~~~~i~f~~~~~~~~~~~~~ 82 (468)
.+|.++||+++.+|+.+- +.+|.+++.+. .++|..+.+.. . .+.+++. |+.+..++..- +.
T Consensus 3 ~~m~~~ri~vl~SG~gsn---l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~------gIp~~~~~~~~----~~ 69 (209)
T 4ds3_A 3 GSMKRNRVVIFISGGGSN---MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAA------GIATQVFKRKD----FA 69 (209)
T ss_dssp ---CCEEEEEEESSCCHH---HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHT------TCCEEECCGGG----SS
T ss_pred CcCCCccEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHc------CCCEEEeCccc----cC
Confidence 346778999887775433 44555666554 37888766532 2 1234433 77777765211 10
Q ss_pred ccccHHHHHHHHHHhchHHHHHHHHHhcCCCCCccEEEeCCCc-chHHHHHHHcCCceEEEcccc
Q 012194 83 QAESIEAYLEKFWQIGPRSLCELVEKMNGSVVPVDCIVYDSFL-PWALDVAKKFGLVGAAFLTQS 146 (468)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~~~-~~~~~~A~~lgiP~i~~~~~~ 146 (468)
+- ....+.+.+.++++. +|+||.-.+. .....+-+.....++-+.++.
T Consensus 70 ---~r--------~~~d~~~~~~l~~~~-----~Dliv~agy~~il~~~~l~~~~~~~iNiHpSL 118 (209)
T 4ds3_A 70 ---SK--------EAHEDAILAALDVLK-----PDIICLAGYMRLLSGRFIAPYEGRILNIHPSL 118 (209)
T ss_dssp ---SH--------HHHHHHHHHHHHHHC-----CSEEEESSCCSCCCHHHHGGGTTCEEEEESSC
T ss_pred ---CH--------HHHHHHHHHHHHhcC-----CCEEEEeccccCcCHHHHhhccCCeEEECCcc
Confidence 10 011223445555543 5999988765 334555556666677665543
No 149
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=48.44 E-value=13 Score=34.05 Aligned_cols=38 Identities=11% Similarity=-0.066 Sum_probs=24.7
Q ss_pred cCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 10 SCRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
.|.+|+|++.... |.+- ..|+++|.++||+|+.++-..
T Consensus 7 ~M~~~~IlVtGat--G~iG--~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 7 PSPKGRVLIAGAT--GFIG--QFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp ----CCEEEECTT--SHHH--HHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCCeEEEECCC--cHHH--HHHHHHHHHCCCCEEEEECCC
Confidence 3556788776543 3333 367889999999999988654
No 150
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=48.15 E-value=1.2e+02 Score=25.12 Aligned_cols=99 Identities=14% Similarity=0.053 Sum_probs=55.0
Q ss_pred HhHhhhcCCCCceEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeCC-ccCCCCcchhhhccCCeEEEeecchH--H
Q 012194 270 CIKWLNDRAKGSVVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRES-EQAKLPENFSDETSQKGLVVNWCPQL--E 346 (468)
Q Consensus 270 ~~~~l~~~~~~~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~nv~~~~~vpq~--~ 346 (468)
+-++|..+. ..+|+-|.- .-.+....++..+.+-++|=++... .....+..+ -+..+++++.... .
T Consensus 36 lg~~la~~g---~~lv~GGG~----~GlM~a~~~ga~~~GG~viGv~p~~l~~~e~~~~~----~~~~i~~~~~~~Rk~~ 104 (189)
T 3sbx_A 36 VGAAIAARG---WTLVWGGGH----VSAMGAVSSAARAHGGWTVGVIPKMLVHRELADHD----ADELVVTETMWERKQV 104 (189)
T ss_dssp HHHHHHHTT---CEEEECCBC----SHHHHHHHHHHHTTTCCEEEEEETTTTTTTTBCTT----CSEEEEESSHHHHHHH
T ss_pred HHHHHHHCC---CEEEECCCc----cCHHHHHHHHHHHcCCcEEEEcCchhhhcccCCCC----CCeeEEcCCHHHHHHH
Confidence 445665542 455555432 1355666666666666666555432 111122211 1334556666543 4
Q ss_pred HhcccCcceeeecCCcchHHHHH---------HcCCceeeccc
Q 012194 347 VLAHEAAGCFLTHCGWNSTMEAL---------SLGVPMVAMPQ 380 (468)
Q Consensus 347 lL~~~~~~~~I~HgG~~s~~Eal---------~~GvP~l~~P~ 380 (468)
++.++++ .++--||.||+-|.. .+++|++.+-.
T Consensus 105 m~~~sda-~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln~ 146 (189)
T 3sbx_A 105 MEDRANA-FITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDP 146 (189)
T ss_dssp HHHHCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECT
T ss_pred HHHHCCE-EEEeCCCcchHHHHHHHHHHHHhcccCCCEEEecC
Confidence 4455664 466788899998874 26899988743
No 151
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=48.08 E-value=20 Score=32.65 Aligned_cols=34 Identities=21% Similarity=0.211 Sum_probs=28.0
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
.+.|||.|+..|..| ..+|+.|+++||+|+++..
T Consensus 29 ~~~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 62 (320)
T 4dll_A 29 PYARKITFLGTGSMG-----LPMARRLCEAGYALQVWNR 62 (320)
T ss_dssp CCCSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred cCCCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 346899999888777 5688999999999998754
No 152
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=47.92 E-value=1.1e+02 Score=24.61 Aligned_cols=138 Identities=12% Similarity=0.126 Sum_probs=73.7
Q ss_pred ceEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEEeecchHHHhc-----ccCcce
Q 012194 281 SVVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQLEVLA-----HEAAGC 355 (468)
Q Consensus 281 ~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL~-----~~~~~~ 355 (468)
+.|-|-+||.. +....++....++.+|..+-..+-+.+. .|+.. .++.. .+++
T Consensus 4 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~SaHR--~p~~~----------------~~~~~~a~~~g~~V-- 61 (163)
T 3ors_A 4 MKVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVSAHR--TPKMM----------------VQFASEARERGINI-- 61 (163)
T ss_dssp CCEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--SHHHH----------------HHHHHHTTTTTCCE--
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEECCcC--CHHHH----------------HHHHHHHHhCCCcE--
Confidence 35666677765 5677888899999998875443333211 11110 12221 2455
Q ss_pred eeecCCcc----hHHHHHHcCCceeecccccchh-HHHHHHHhh-h--cceeE-ecCCCCCccCHHHHHHHHHHHhcCcc
Q 012194 356 FLTHCGWN----STMEALSLGVPMVAMPQWSDQS-TNGKYIMDV-W--KMGLK-VPADEKGIVRREAIAHCISEILEGER 426 (468)
Q Consensus 356 ~I~HgG~~----s~~Eal~~GvP~l~~P~~~DQ~-~na~~l~~~-~--g~G~~-l~~~~~~~~~~~~l~~~i~~ll~~~~ 426 (468)
+|.=+|.. ++..++ .-+|+|.+|...... .....+.-. | |+.+. +..++-+-.++.-+...|.. +.|+
T Consensus 62 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~Il~-~~d~- 138 (163)
T 3ors_A 62 IIAGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATTAIGAAGAKNAGILAARMLS-IQNP- 138 (163)
T ss_dssp EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHHH-TTCT-
T ss_pred EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCceEEEEcCCcccHHHHHHHHHHHh-CCCH-
Confidence 88877755 444443 568999999864321 222222222 0 33111 11100002234444444433 4565
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 012194 427 GKEIRQNAGKWSNFAKEAV 445 (468)
Q Consensus 427 ~~~~~~~a~~~~~~~~~~~ 445 (468)
+++++.+.+++.+++.+
T Consensus 139 --~l~~kl~~~r~~~~~~v 155 (163)
T 3ors_A 139 --SLVEKLNQYESSLIQKV 155 (163)
T ss_dssp --HHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHHH
Confidence 89999999988888653
No 153
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=47.87 E-value=16 Score=30.83 Aligned_cols=33 Identities=9% Similarity=0.205 Sum_probs=23.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
|||++.... |-+- ..++++|.++||+|+.++-.
T Consensus 1 M~ilItGat--G~iG--~~l~~~L~~~g~~V~~~~R~ 33 (219)
T 3dqp_A 1 MKIFIVGST--GRVG--KSLLKSLSTTDYQIYAGARK 33 (219)
T ss_dssp CEEEEESTT--SHHH--HHHHHHHTTSSCEEEEEESS
T ss_pred CeEEEECCC--CHHH--HHHHHHHHHCCCEEEEEECC
Confidence 577766433 3333 57899999999999998754
No 154
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=47.66 E-value=14 Score=34.68 Aligned_cols=61 Identities=15% Similarity=0.312 Sum_probs=41.6
Q ss_pred cchHHHhcccCcceeeecCCcchHHHHHHc----CC-ceeecccccchhHHHHHHHhhhcceeEecCCCCCccCHHHHHH
Q 012194 342 CPQLEVLAHEAAGCFLTHCGWNSTMEALSL----GV-PMVAMPQWSDQSTNGKYIMDVWKMGLKVPADEKGIVRREAIAH 416 (468)
Q Consensus 342 vpq~~lL~~~~~~~~I~HgG~~s~~Eal~~----Gv-P~l~~P~~~DQ~~na~~l~~~~g~G~~l~~~~~~~~~~~~l~~ 416 (468)
.+..++-..+++ +|+=||=||++.|... ++ |++.+... .+ |. +. +++.+++.+
T Consensus 106 ~~~~~~~~~~Dl--VIvlGGDGTlL~aa~~~~~~~vpPiLGIN~G-----------~l---GF-Lt-----~~~~~~~~~ 163 (388)
T 3afo_A 106 GPEQDIVNRTDL--LVTLGGDGTILHGVSMFGNTQVPPVLAFALG-----------TL---GF-LS-----PFDFKEHKK 163 (388)
T ss_dssp CCHHHHHHHCSE--EEEEESHHHHHHHHHTTTTSCCCCEEEEECS-----------SC---CS-SC-----CEEGGGHHH
T ss_pred cchhhcccCCCE--EEEEeCcHHHHHHHHHhcccCCCeEEEEECC-----------Cc---cc-CC-----cCChHHHHH
Confidence 344556677899 9999999999999754 67 78888631 11 21 21 345567777
Q ss_pred HHHHHhcC
Q 012194 417 CISEILEG 424 (468)
Q Consensus 417 ~i~~ll~~ 424 (468)
++.+++++
T Consensus 164 al~~il~g 171 (388)
T 3afo_A 164 VFQEVISS 171 (388)
T ss_dssp HHHHHHTT
T ss_pred HHHHHhcC
Confidence 77777765
No 155
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=47.29 E-value=27 Score=32.33 Aligned_cols=26 Identities=27% Similarity=0.381 Sum_probs=21.4
Q ss_pred ccCcceeeecCCcchH---HHHHHcCCceee
Q 012194 350 HEAAGCFLTHCGWNST---MEALSLGVPMVA 377 (468)
Q Consensus 350 ~~~~~~~I~HgG~~s~---~Eal~~GvP~l~ 377 (468)
++|+ +|++||+-+. ..|-..|+|.++
T Consensus 92 ~PDv--Vi~~g~~~s~p~~laA~~~~iP~vi 120 (365)
T 3s2u_A 92 RPVC--VLGLGGYVTGPGGLAARLNGVPLVI 120 (365)
T ss_dssp CCSE--EEECSSSTHHHHHHHHHHTTCCEEE
T ss_pred CCCE--EEEcCCcchHHHHHHHHHcCCCEEE
Confidence 6788 9999998765 557778999986
No 156
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=47.01 E-value=52 Score=30.22 Aligned_cols=101 Identities=12% Similarity=0.026 Sum_probs=56.6
Q ss_pred cEEEEEcCCCcc--C--HHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEEcCCCCCCCCCCccccHHH
Q 012194 14 VHCLVLSYPAQG--H--INPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEAISDGYDQGGSAQAESIEA 89 (468)
Q Consensus 14 ~~il~~~~~~~G--H--~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~~~~~~~~~~~~~~~~~ 89 (468)
..|++.+..+.. . ..-+.++++.|.++|++|.+++++.-.+..++..+.... ....+. ...+
T Consensus 186 ~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~~e~~~~~~i~~~~~~--~~~~l~---------g~~s--- 251 (349)
T 3tov_A 186 ILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGPMDLEMVQPVVEQMET--KPIVAT---------GKFQ--- 251 (349)
T ss_dssp CEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCTTTHHHHHHHHHTCSS--CCEECT---------TCCC---
T ss_pred CEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCcchHHHHHHHHHhccc--ccEEee---------CCCC---
Confidence 346666655442 1 235889999999999999987766555444321000000 001110 0111
Q ss_pred HHHHHHHhchHHHHHHHHHhcCCCCCccEEEeCCCcchHHHHHHHcCCceEEEcccc
Q 012194 90 YLEKFWQIGPRSLCELVEKMNGSVVPVDCIVYDSFLPWALDVAKKFGLVGAAFLTQS 146 (468)
Q Consensus 90 ~~~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~~~~~~~~~A~~lgiP~i~~~~~~ 146 (468)
+.++..-+.. -|++|+.- .+.+.+|..+|+|+|.++..+
T Consensus 252 ------------l~e~~ali~~----a~~~i~~D--sG~~HlAaa~g~P~v~lfg~t 290 (349)
T 3tov_A 252 ------------LGPLAAAMNR----CNLLITND--SGPMHVGISQGVPIVALYGPS 290 (349)
T ss_dssp ------------HHHHHHHHHT----CSEEEEES--SHHHHHHHTTTCCEEEECSSC
T ss_pred ------------HHHHHHHHHh----CCEEEECC--CCHHHHHHhcCCCEEEEECCC
Confidence 2233333332 48888742 456788999999999876543
No 157
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=47.00 E-value=1.2e+02 Score=25.16 Aligned_cols=100 Identities=16% Similarity=0.114 Sum_probs=55.6
Q ss_pred hHhHhhhcCCCCceEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeCCc-cCCCCcchhhhccCCeEEEeecchH--
Q 012194 269 SCIKWLNDRAKGSVVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRESE-QAKLPENFSDETSQKGLVVNWCPQL-- 345 (468)
Q Consensus 269 ~~~~~l~~~~~~~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~nv~~~~~vpq~-- 345 (468)
++-++|..++ ..+|+-|.- .-......++..+.+-++|=++...- ....+... -+..++++.....
T Consensus 44 ~lg~~La~~g---~~lV~GGG~----~GlM~a~~~gA~~~GG~viGv~p~~l~~~e~~~~~----~~~~i~~~~~~~Rk~ 112 (199)
T 3qua_A 44 EVGSSIAARG---WTLVSGGGN----VSAMGAVAQAARAKGGHTVGVIPKALVHRELADVD----AAELIVTDTMRERKR 112 (199)
T ss_dssp HHHHHHHHTT---CEEEECCBC----SHHHHHHHHHHHHTTCCEEEEEEGGGTTTTTBCTT----SSEEEEESSHHHHHH
T ss_pred HHHHHHHHCC---CEEEECCCc----cCHHHHHHHHHHHcCCcEEEEeCchhhhccccCCC----CCeeEEcCCHHHHHH
Confidence 3445665543 445555442 13556666666666666665554321 11122211 1345566666543
Q ss_pred HHhcccCcceeeecCCcchHHHHHH---------cCCceeeccc
Q 012194 346 EVLAHEAAGCFLTHCGWNSTMEALS---------LGVPMVAMPQ 380 (468)
Q Consensus 346 ~lL~~~~~~~~I~HgG~~s~~Eal~---------~GvP~l~~P~ 380 (468)
.....+++ .++--||.||+-|... +++|++.+-.
T Consensus 113 ~m~~~sda-~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln~ 155 (199)
T 3qua_A 113 EMEHRSDA-FIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLDP 155 (199)
T ss_dssp HHHHHCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECT
T ss_pred HHHHhcCc-cEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEcC
Confidence 44455665 5667788999888743 6899988753
No 158
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=46.89 E-value=17 Score=33.31 Aligned_cols=35 Identities=14% Similarity=0.145 Sum_probs=24.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
..|+|++... .|.+- ..|+++|.++||+|+.+.-.
T Consensus 24 ~~~~vlVtGa--tG~iG--~~l~~~L~~~g~~V~~~~r~ 58 (351)
T 3ruf_A 24 SPKTWLITGV--AGFIG--SNLLEKLLKLNQVVIGLDNF 58 (351)
T ss_dssp SCCEEEEETT--TSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred CCCeEEEECC--CcHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 4578777643 34333 46889999999999998753
No 159
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=45.97 E-value=29 Score=31.36 Aligned_cols=38 Identities=11% Similarity=0.022 Sum_probs=29.3
Q ss_pred CcEEEEEcCCCccC----HHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 13 LVHCLVLSYPAQGH----INPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 13 ~~~il~~~~~~~GH----~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
++||+++..|-.+- +.-..+++++|.++||+|..+.+.
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~ 54 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPA 54 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 47899888764443 345678999999999999998743
No 160
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=45.93 E-value=8.5 Score=35.87 Aligned_cols=32 Identities=22% Similarity=0.200 Sum_probs=26.5
Q ss_pred c-EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 14 V-HCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 14 ~-~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
| ||.|+..|..|. .+|..|.++||+|+++...
T Consensus 15 M~kI~iIG~G~mG~-----~la~~L~~~G~~V~~~~r~ 47 (366)
T 1evy_A 15 LNKAVVFGSGAFGT-----ALAMVLSKKCREVCVWHMN 47 (366)
T ss_dssp EEEEEEECCSHHHH-----HHHHHHTTTEEEEEEECSC
T ss_pred cCeEEEECCCHHHH-----HHHHHHHhCCCEEEEEECC
Confidence 5 999998887774 6789999999999988653
No 161
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=45.77 E-value=21 Score=32.60 Aligned_cols=33 Identities=12% Similarity=0.129 Sum_probs=28.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
.+||.|+..|+.| +-++|+.|+++||+|+..=.
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 3689999999888 55799999999999998654
No 162
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=45.75 E-value=19 Score=33.03 Aligned_cols=35 Identities=17% Similarity=0.123 Sum_probs=24.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
++.|+|++... .|-+- ..|+++|.++||+|+.+.-
T Consensus 25 ~~~~~vlVtGa--tG~iG--~~l~~~L~~~g~~V~~~~r 59 (352)
T 1sb8_A 25 AQPKVWLITGV--AGFIG--SNLLETLLKLDQKVVGLDN 59 (352)
T ss_dssp HSCCEEEEETT--TSHHH--HHHHHHHHHTTCEEEEEEC
T ss_pred ccCCeEEEECC--CcHHH--HHHHHHHHHCCCEEEEEeC
Confidence 44567776643 33332 4678999999999998875
No 163
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=45.60 E-value=15 Score=33.36 Aligned_cols=39 Identities=15% Similarity=-0.043 Sum_probs=28.2
Q ss_pred cE-EEEEcCCCccCH--------------HHHHHHHHHHHhCCCeEEEEeCCcc
Q 012194 14 VH-CLVLSYPAQGHI--------------NPLLQFAKRLDHKGLKVTLVTTYFI 52 (468)
Q Consensus 14 ~~-il~~~~~~~GH~--------------~p~l~La~~L~~rGh~Vt~~~~~~~ 52 (468)
.| |++.+.|++=.+ ..=.++|+++.++|++|++++.+..
T Consensus 37 k~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 37 RRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp CCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred CeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCCC
Confidence 45 666666664444 1345789999999999999998643
No 164
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=45.59 E-value=16 Score=32.47 Aligned_cols=32 Identities=22% Similarity=0.150 Sum_probs=25.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
|||+|+..|..| ..+|..|.++||+|+++...
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~r~ 32 (291)
T 1ks9_A 1 MKITVLGCGALG-----QLWLTALCKQGHEVQGWLRV 32 (291)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CeEEEECcCHHH-----HHHHHHHHhCCCCEEEEEcC
Confidence 689988877666 36889999999999998653
No 165
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=45.55 E-value=12 Score=36.03 Aligned_cols=42 Identities=21% Similarity=0.170 Sum_probs=35.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcccc
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISK 54 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~ 54 (468)
.-=+++...|+.|-..-.+++|...+.+|..|.|++.+...+
T Consensus 197 G~liiIaG~pG~GKTtlal~ia~~~a~~g~~vl~fSlEms~~ 238 (444)
T 3bgw_A 197 RNFVLIAARPSMGKTAFALKQAKNMSDNDDVVNLHSLEMGKK 238 (444)
T ss_dssp SCEEEEEECSSSSHHHHHHHHHHHHHHTTCEEEEECSSSCTT
T ss_pred CcEEEEEeCCCCChHHHHHHHHHHHHHcCCEEEEEECCCCHH
Confidence 345677888899999999999999998999999999886554
No 166
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=45.50 E-value=26 Score=30.78 Aligned_cols=45 Identities=24% Similarity=0.273 Sum_probs=26.7
Q ss_pred chhhhhhhcCC-CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 2 ENIEKKAASCR-LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 2 ~~~~~~~~~~~-~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
+||......++ ..|+++++.++.| + =.++|++|+++|++|.++.-
T Consensus 16 ~~~~~~~~~m~l~~k~vlITGas~g-I--G~~la~~l~~~G~~V~~~~r 61 (271)
T 4iin_A 16 ENLYFQSNAMQFTGKNVLITGASKG-I--GAEIAKTLASMGLKVWINYR 61 (271)
T ss_dssp --------CCCCSCCEEEETTCSSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred ceehhhhhhcccCCCEEEEECCCcH-H--HHHHHHHHHHCCCEEEEEeC
Confidence 45555544443 3367777776654 2 25889999999999998875
No 167
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=45.43 E-value=21 Score=32.48 Aligned_cols=35 Identities=20% Similarity=0.255 Sum_probs=24.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
+.|+|++... .|.+- ..|++.|.++||+|+.++-.
T Consensus 12 ~~M~ilVtGa--tG~iG--~~l~~~L~~~g~~V~~~~r~ 46 (342)
T 2x4g_A 12 AHVKYAVLGA--TGLLG--HHAARAIRAAGHDLVLIHRP 46 (342)
T ss_dssp CCCEEEEEST--TSHHH--HHHHHHHHHTTCEEEEEECT
T ss_pred cCCEEEEECC--CcHHH--HHHHHHHHHCCCEEEEEecC
Confidence 4578877643 33332 46788999999999988753
No 168
>3pdi_B Nitrogenase MOFE cofactor biosynthesis protein NI; nitrogenase cofactor maturation, NIFB, nifdk, NIFH; HET: CZL; 2.40A {Azotobacter vinelandii}
Probab=44.73 E-value=1.5e+02 Score=28.29 Aligned_cols=89 Identities=15% Similarity=0.103 Sum_probs=54.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEEcCCCCCCCCCCccccHHHHH
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEAISDGYDQGGSAQAESIEAYL 91 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~~~~~~~~~~~~~~~~~~~ 91 (468)
...|++++.. -.-.+.+++-|.+.|.+|..+.+....+..++. . ... . ...+..
T Consensus 312 ~Gkrv~i~~~-----~~~~~~l~~~L~elGm~vv~~~~~~~~~~~~~~------~---------~~~--v-~~~D~~--- 365 (458)
T 3pdi_B 312 SSARTAIAAD-----PDLLLGFDALLRSMGAHTVAAVVPARAAALVDS------P---------LPS--V-RVGDLE--- 365 (458)
T ss_dssp TTCEEEEECC-----HHHHHHHHHHHHTTTCEEEEEEESSCCSCCTTT------T---------SSC--E-EESHHH---
T ss_pred CCCEEEEECC-----cHHHHHHHHHHHHCCCEEEEEEECCCChhhhhC------c---------cCc--E-EeCCHH---
Confidence 3568888533 345678999999999999988876543322211 0 000 0 001111
Q ss_pred HHHHHhchHHHHHHHHHhcCCCCCccEEEeCCCcchHHHHHHHcCCceEEEc
Q 012194 92 EKFWQIGPRSLCELVEKMNGSVVPVDCIVYDSFLPWALDVAKKFGLVGAAFL 143 (468)
Q Consensus 92 ~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~~~~~~~~~A~~lgiP~i~~~ 143 (468)
.+.+++++. ++|+||.+.. ...+|+++|||++.++
T Consensus 366 ---------~le~~i~~~-----~pDllig~~~---~~~~a~k~gip~~~~g 400 (458)
T 3pdi_B 366 ---------DLEHAARAG-----QAQLVIGNSH---ALASARRLGVPLLRAG 400 (458)
T ss_dssp ---------HHHHHHHHH-----TCSEEEECTT---HHHHHHHTTCCEEECS
T ss_pred ---------HHHHHHHhc-----CCCEEEEChh---HHHHHHHcCCCEEEec
Confidence 133444443 2599999844 5678999999999753
No 169
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=44.72 E-value=17 Score=31.04 Aligned_cols=37 Identities=16% Similarity=0.217 Sum_probs=24.7
Q ss_pred cCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 10 SCRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
..+.|+|++... .|.+- ..++++|.++||+|+.++-.
T Consensus 18 ~l~~~~ilVtGa--tG~iG--~~l~~~L~~~G~~V~~~~R~ 54 (236)
T 3e8x_A 18 YFQGMRVLVVGA--NGKVA--RYLLSELKNKGHEPVAMVRN 54 (236)
T ss_dssp ---CCEEEEETT--TSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CcCCCeEEEECC--CChHH--HHHHHHHHhCCCeEEEEECC
Confidence 355678877643 33332 36789999999999998854
No 170
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=44.57 E-value=92 Score=25.75 Aligned_cols=102 Identities=14% Similarity=0.055 Sum_probs=58.7
Q ss_pred hhHhHhhhcCCCCceEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeCCcc-CCCCcchhhhccCCeEEEeecchH-
Q 012194 268 ESCIKWLNDRAKGSVVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRESEQ-AKLPENFSDETSQKGLVVNWCPQL- 345 (468)
Q Consensus 268 ~~~~~~l~~~~~~~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~nv~~~~~vpq~- 345 (468)
.++-++|..++ ..+||-|.-. -......++..+.+-++|=+++..-. ...+.. --++..+++..+..
T Consensus 23 ~~lg~~La~~g---~~lV~GGg~~----GiM~aa~~gA~~~gG~~iGv~p~~l~~~e~~~~----~~~~~~~~~~~~~Rk 91 (191)
T 1t35_A 23 AELGVYMAEQG---IGLVYGGSRV----GLMGTIADAIMENGGTAIGVMPSGLFSGEVVHQ----NLTELIEVNGMHERK 91 (191)
T ss_dssp HHHHHHHHHTT---CEEEECCCCS----HHHHHHHHHHHTTTCCEEEEEETTCCHHHHTTC----CCSEEEEESHHHHHH
T ss_pred HHHHHHHHHCC---CEEEECCCcc----cHHHHHHHHHHHcCCeEEEEeCchhcccccccC----CCCccccCCCHHHHH
Confidence 34556666543 5666766431 35566666666677777766644210 001111 11334556767754
Q ss_pred HHhcccCcceeeecCCcchHHHH---H------HcCCceeeccc
Q 012194 346 EVLAHEAAGCFLTHCGWNSTMEA---L------SLGVPMVAMPQ 380 (468)
Q Consensus 346 ~lL~~~~~~~~I~HgG~~s~~Ea---l------~~GvP~l~~P~ 380 (468)
.++..-+-..++--||.||+-|. + .+++|++.+-.
T Consensus 92 ~~~~~~sda~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~ 135 (191)
T 1t35_A 92 AKMSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNV 135 (191)
T ss_dssp HHHHHHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECG
T ss_pred HHHHHHCCEEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecC
Confidence 55543333467888999998765 4 37899998864
No 171
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=44.51 E-value=1.3e+02 Score=24.46 Aligned_cols=142 Identities=16% Similarity=0.173 Sum_probs=76.8
Q ss_pred ceEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEEeecchHHHh-----cccCcce
Q 012194 281 SVVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQLEVL-----AHEAAGC 355 (468)
Q Consensus 281 ~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL-----~~~~~~~ 355 (468)
+.|-|-+||.. +....++....++.+|..+-+.+-+.+. .|+.. .++. ..+++
T Consensus 13 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~ev~V~SaHR--~p~~~----------------~~~~~~a~~~g~~V-- 70 (174)
T 3kuu_A 13 VKIAIVMGSKS--DWATMQFAADVLTTLNVPFHVEVVSAHR--TPDRL----------------FSFAEQAEANGLHV-- 70 (174)
T ss_dssp CCEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--CHHHH----------------HHHHHHTTTTTCSE--
T ss_pred CcEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEEcccC--CHHHH----------------HHHHHHHHhCCCcE--
Confidence 45777777765 5677888899999998875444433211 11110 1222 23455
Q ss_pred eeecCCcchHHHHHH---cCCceeecccccc-hhHHHHHHHhh-h--cceeE-ecCCCCCccCHHHHHHHHHHHhcCccH
Q 012194 356 FLTHCGWNSTMEALS---LGVPMVAMPQWSD-QSTNGKYIMDV-W--KMGLK-VPADEKGIVRREAIAHCISEILEGERG 427 (468)
Q Consensus 356 ~I~HgG~~s~~Eal~---~GvP~l~~P~~~D-Q~~na~~l~~~-~--g~G~~-l~~~~~~~~~~~~l~~~i~~ll~~~~~ 427 (468)
+|.=+|...-+-++. .-+|+|.+|.... -......+.-. | |+.+. +..++-+-.++.-+...|.. +.|+
T Consensus 71 iIa~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmP~GvPVatV~I~~a~~~nAa~lAa~ILa-~~d~-- 147 (174)
T 3kuu_A 71 IIAGNGGAAHLPGMLAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILA-LHDT-- 147 (174)
T ss_dssp EEEEEESSCCHHHHHHHTCSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSSHHHHHHHHHHHHHHHH-TTCH--
T ss_pred EEEECChhhhhHHHHHhccCCCEEEeeCCCCCCCCHHHHHHhhhCCCCCeeEEEEeCCccchHHHHHHHHHHc-CCCH--
Confidence 888777654444333 3589999998542 22233333222 0 33211 11110001234444444433 4665
Q ss_pred HHHHHHHHHHHHHHHHHHHcC
Q 012194 428 KEIRQNAGKWSNFAKEAVAKG 448 (468)
Q Consensus 428 ~~~~~~a~~~~~~~~~~~~~~ 448 (468)
+++++.+.+++.+++.+.+.
T Consensus 148 -~l~~kl~~~r~~~~~~v~~~ 167 (174)
T 3kuu_A 148 -ELAGRLAHWRQSQTDDVLDN 167 (174)
T ss_dssp -HHHHHHHHHHHHHHHHHHTC
T ss_pred -HHHHHHHHHHHHHHHHHHhC
Confidence 89999999999998765443
No 172
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=44.45 E-value=25 Score=34.71 Aligned_cols=40 Identities=13% Similarity=-0.004 Sum_probs=30.8
Q ss_pred CCCcEEEEEcCCCccCH--HHHHHHHHH--HHhCCCeEEEEeCC
Q 012194 11 CRLVHCLVLSYPAQGHI--NPLLQFAKR--LDHKGLKVTLVTTY 50 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~--~p~l~La~~--L~~rGh~Vt~~~~~ 50 (468)
.++|||++++....+|- .-+..+++. |.+.||+|++++..
T Consensus 203 ~~~~rI~~~~~~~~~~g~~~~~~~l~~~L~~~~~~~~v~~~~~~ 246 (568)
T 2vsy_A 203 KGPLRVGFVSNGFGAHPTGLLTVALFEALQRRQPDLQMHLFATS 246 (568)
T ss_dssp SSCEEEEEEESCSSSSHHHHHHHHHHHHHHHHCTTEEEEEEESS
T ss_pred CCCeEEEEECcccccChHHHHHHHHHhhccCCcccEEEEEEECC
Confidence 56799999886655443 346789999 77789999999864
No 173
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=43.82 E-value=1.1e+02 Score=26.47 Aligned_cols=38 Identities=13% Similarity=0.092 Sum_probs=26.9
Q ss_pred CcEEEEEcCCCccCH-HHHHHHHHHHHhCCCeEEEEeCC
Q 012194 13 LVHCLVLSYPAQGHI-NPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 13 ~~~il~~~~~~~GH~-~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
.|||+++-.-+.-++ ..+...++.+..-|.+|.+++.+
T Consensus 1 ~mrilvINPnts~~~T~~i~~~~~~~~~p~~~i~~~t~~ 39 (245)
T 3qvl_A 1 SVRIQVINPNTSLAMTETIGAAARAVAAPGTEILAVCPR 39 (245)
T ss_dssp CEEEEEECSSCCHHHHHHHHHHHHHHCCTTEEEEEECCS
T ss_pred CCEEEEEeCCCCHHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 379988766666555 45666777777668888887754
No 174
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=43.77 E-value=15 Score=31.81 Aligned_cols=33 Identities=18% Similarity=0.225 Sum_probs=28.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
.+|||.|+..|..|- .||+.|.++||+|+.+..
T Consensus 5 ~~mkI~IIG~G~~G~-----sLA~~L~~~G~~V~~~~~ 37 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTV-----NMAEKLDSVGHYVTVLHA 37 (232)
T ss_dssp CCCEEEEECCSCCCS-----CHHHHHHHTTCEEEECSS
T ss_pred CCcEEEEEeeCHHHH-----HHHHHHHHCCCEEEEecC
Confidence 468999999998874 588999999999998765
No 175
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=43.61 E-value=14 Score=34.23 Aligned_cols=34 Identities=26% Similarity=0.149 Sum_probs=28.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
..|||.|+..|..|. .+|..|++.||+|++....
T Consensus 28 ~~mkI~VIGaG~mG~-----alA~~La~~G~~V~l~~r~ 61 (356)
T 3k96_A 28 FKHPIAILGAGSWGT-----ALALVLARKGQKVRLWSYE 61 (356)
T ss_dssp CCSCEEEECCSHHHH-----HHHHHHHTTTCCEEEECSC
T ss_pred cCCeEEEECccHHHH-----HHHHHHHHCCCeEEEEeCC
Confidence 358999999888874 6889999999999998864
No 176
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=43.60 E-value=16 Score=33.23 Aligned_cols=42 Identities=14% Similarity=0.192 Sum_probs=29.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccc
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLH 57 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 57 (468)
...|||+++..|+.| ..+|..|++.||+|+++..+...+.+.
T Consensus 17 ~~~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~~~~~~~~i~ 58 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVG-----CYYGGMLARAGHEVILIARPQHVQAIE 58 (318)
T ss_dssp ---CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECCHHHHHHHH
T ss_pred ccCCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcHhHHHHHH
Confidence 456899999888887 457889999999999994333333443
No 177
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=43.49 E-value=44 Score=28.12 Aligned_cols=47 Identities=9% Similarity=-0.059 Sum_probs=33.5
Q ss_pred hhHhHhhhcCCCCceEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEE
Q 012194 268 ESCIKWLNDRAKGSVVYVSFGSYAPLKVEEMEELAWGLKATNQYFLW 314 (468)
Q Consensus 268 ~~~~~~l~~~~~~~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~ 314 (468)
+.+.+|+.....+.++||..+|......+..+...++|+++|..+.+
T Consensus 16 ~~~~~f~~~~~~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~ 62 (206)
T 3l4e_A 16 PLFTEFESNLQGKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEE 62 (206)
T ss_dssp HHHHHHSCCCTTCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHcCCCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEE
Confidence 44566764434566999988876544556788899999999987543
No 178
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=42.75 E-value=24 Score=27.55 Aligned_cols=35 Identities=20% Similarity=0.114 Sum_probs=29.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
.++++++.|+ =+.|++.+++.|.++|.+|+++ ...
T Consensus 19 ~~~llIaGG~--GiaPl~sm~~~l~~~~~~v~l~-g~R 53 (142)
T 3lyu_A 19 GKILAIGAYT--GIVEVYPIAKAWQEIGNDVTTL-HVT 53 (142)
T ss_dssp SEEEEEEETT--HHHHHHHHHHHHHHTTCEEEEE-EEE
T ss_pred CeEEEEECcC--cHHHHHHHHHHHHhcCCcEEEE-EeC
Confidence 4788887765 3899999999999999999998 543
No 179
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=42.73 E-value=33 Score=28.44 Aligned_cols=39 Identities=8% Similarity=-0.119 Sum_probs=27.8
Q ss_pred CCCcEEEEEcCCCccCH----HHHHHHHHHHHhCCCeEEEEeCC
Q 012194 11 CRLVHCLVLSYPAQGHI----NPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~----~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
..+|+|.+++... +.- .-...|++.|+++|+.|.+-..+
T Consensus 11 ~~~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GGG~ 53 (189)
T 3sbx_A 11 PGRWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGGGH 53 (189)
T ss_dssp --CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCBC
T ss_pred CCCeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 4468999998766 443 34567888889999988777655
No 180
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=42.40 E-value=14 Score=33.20 Aligned_cols=32 Identities=16% Similarity=0.076 Sum_probs=26.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
.|||.|+..|..|. .+|+.|+++||+|+++..
T Consensus 15 ~~~I~vIG~G~mG~-----~~A~~l~~~G~~V~~~dr 46 (296)
T 3qha_A 15 QLKLGYIGLGNMGA-----PMATRMTEWPGGVTVYDI 46 (296)
T ss_dssp CCCEEEECCSTTHH-----HHHHHHTTSTTCEEEECS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 57999998887774 678999999999998754
No 181
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=42.18 E-value=32 Score=25.69 Aligned_cols=37 Identities=11% Similarity=0.022 Sum_probs=29.7
Q ss_pred CCcEEEEEcCCCccCHHH-HHHHHHHHHhCCCeEEEEe
Q 012194 12 RLVHCLVLSYPAQGHINP-LLQFAKRLDHKGLKVTLVT 48 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p-~l~La~~L~~rGh~Vt~~~ 48 (468)
+.+||+++|..|.|.-.- ...|-+.+.++|.++.+-.
T Consensus 20 ~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~~~V~~ 57 (113)
T 1tvm_A 20 SKRKIIVACGGAVATSTMAAEEIKELCQSHNIPVELIQ 57 (113)
T ss_dssp SSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cccEEEEECCCCHHHHHHHHHHHHHHHHHcCCeEEEEE
Confidence 456899999999999874 6777888888999875544
No 182
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=41.80 E-value=1.6e+02 Score=27.86 Aligned_cols=137 Identities=14% Similarity=0.065 Sum_probs=75.6
Q ss_pred CCceEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEEeecchHHHhc-----cc-C
Q 012194 279 KGSVVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQLEVLA-----HE-A 352 (468)
Q Consensus 279 ~~~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL~-----~~-~ 352 (468)
..+.|-|-+||.. +....+++...++..|..+-+-+-+.+. .|+.. ..+.. .. +
T Consensus 264 ~~~~V~Ii~gs~S--D~~~~~~a~~~l~~~gi~~~v~V~saHR--~p~~~----------------~~~~~~~~~~g~~~ 323 (425)
T 2h31_A 264 SQCRVVVLMGSTS--DLGHCEKIKKACGNFGIPCELRVTSAHK--GPDET----------------LRIKAEYEGDGIPT 323 (425)
T ss_dssp CCCEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--CHHHH----------------HHHHHHHHTTCCCE
T ss_pred CCCeEEEEecCcc--cHHHHHHHHHHHHHcCCceEEeeeeccC--CHHHH----------------HHHHHHHHHCCCCe
Confidence 3457778888865 5677888889999998875433322211 11110 12222 13 3
Q ss_pred cceeeecCCcc----hHHHHHHcCCceeecccccchhHHHHHHHhhhc--ceeEecCCCCCccCHHHHHHHHHHHhcCcc
Q 012194 353 AGCFLTHCGWN----STMEALSLGVPMVAMPQWSDQSTNGKYIMDVWK--MGLKVPADEKGIVRREAIAHCISEILEGER 426 (468)
Q Consensus 353 ~~~~I~HgG~~----s~~Eal~~GvP~l~~P~~~DQ~~na~~l~~~~g--~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~ 426 (468)
+ +|.=+|.. ++..++ .-+|+|.+|....-......+.-. + -|+.+..- ....++.-+...|. -+.|+
T Consensus 324 v--iIa~AG~~a~Lpgvva~~-t~~PVIgvP~~~~~~G~daLls~v-qmp~g~pvatv-~~~~nAa~~A~~Il-~~~~~- 396 (425)
T 2h31_A 324 V--FVAVAGRSNGLGPVMSGN-TAYPVISCPPLTPDWGVQDVWSSL-RLPSGLGCSTV-LSPEGSAQFAAQIF-GLSNH- 396 (425)
T ss_dssp E--EEEECCSSCCHHHHHHHH-CSSCEEECCCCCTTTHHHHGGGTS-SCCSSCCCEEC-CCHHHHHHHHHHHH-HTTCH-
T ss_pred E--EEEEcCcccchHhHHhcc-CCCCEEEeeCccccccHHHHHHHh-cCCCCCceEEe-cCchHHHHHHHHHH-ccCCH-
Confidence 5 77777654 444444 479999999853333333333333 3 22222111 01334555555554 35665
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 012194 427 GKEIRQNAGKWSNFAKEA 444 (468)
Q Consensus 427 ~~~~~~~a~~~~~~~~~~ 444 (468)
+++++.+..+......
T Consensus 397 --~l~~kl~~~~~~~~~~ 412 (425)
T 2h31_A 397 --LVWSKLRASILNTWIS 412 (425)
T ss_dssp --HHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHHHH
Confidence 8888888877777653
No 183
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=41.80 E-value=24 Score=32.91 Aligned_cols=38 Identities=3% Similarity=-0.004 Sum_probs=28.8
Q ss_pred CCcEEEEEcCCCccCH----HHHHHHHHHH-HhCCCeEEEEeC
Q 012194 12 RLVHCLVLSYPAQGHI----NPLLQFAKRL-DHKGLKVTLVTT 49 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~----~p~l~La~~L-~~rGh~Vt~~~~ 49 (468)
.+|||+++..|-.+-. .-..++.++| .++||+|+.+..
T Consensus 2 ~k~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~i~~ 44 (377)
T 1ehi_A 2 TKKRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIVFAI 44 (377)
T ss_dssp -CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEEEEE
T ss_pred CCcEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEEEEE
Confidence 4689999877755532 3467889999 999999998864
No 184
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=41.41 E-value=56 Score=27.70 Aligned_cols=108 Identities=11% Similarity=-0.006 Sum_probs=55.6
Q ss_pred cCCCcEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCccc---cccccCCCCCCCCeEEEEcCCCCCCCCCCccc
Q 012194 10 SCRLVHCLVLSYPAQGHINPLLQFAKRLDH-KGLKVTLVTTYFIS---KSLHRDSSSSSASIALEAISDGYDQGGSAQAE 85 (468)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~~~~---~~~~~~~~~~~~~i~f~~~~~~~~~~~~~~~~ 85 (468)
...++||+|+.+|+.+-+..++ +++.. .+++|..+.+.... +.+++. |+.+..++.. . . .
T Consensus 9 ~~~~~ri~vl~SG~gsnl~all---~~~~~~~~~eI~~Vis~~~a~~~~~A~~~------gIp~~~~~~~--~--~---~ 72 (215)
T 3da8_A 9 PSAPARLVVLASGTGSLLRSLL---DAAVGDYPARVVAVGVDRECRAAEIAAEA------SVPVFTVRLA--D--H---P 72 (215)
T ss_dssp CCSSEEEEEEESSCCHHHHHHH---HHSSTTCSEEEEEEEESSCCHHHHHHHHT------TCCEEECCGG--G--S---S
T ss_pred CCCCcEEEEEEeCChHHHHHHH---HHHhccCCCeEEEEEeCCchHHHHHHHHc------CCCEEEeCcc--c--c---c
Confidence 3456899998877654444433 44432 35688766554332 233333 7777766421 1 0 0
Q ss_pred cHHHHHHHHHHhchHHHHHHHHHhcCCCCCccEEEeCCCc-chHHHHHHHcCCceEEEcccc
Q 012194 86 SIEAYLEKFWQIGPRSLCELVEKMNGSVVPVDCIVYDSFL-PWALDVAKKFGLVGAAFLTQS 146 (468)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~~~-~~~~~~A~~lgiP~i~~~~~~ 146 (468)
+-. .....+.+.++++ . +|+||.-.+. .....+-+.....++-+.++.
T Consensus 73 ~r~--------~~d~~~~~~l~~~----~-~Dlivlagy~~iL~~~~l~~~~~~~iNiHpSL 121 (215)
T 3da8_A 73 SRD--------AWDVAITAATAAH----E-PDLVVSAGFMRILGPQFLSRFYGRTLNTHPAL 121 (215)
T ss_dssp SHH--------HHHHHHHHHHHTT----C-CSEEEEEECCSCCCHHHHHHHTTTEEEEESSC
T ss_pred chh--------hhhHHHHHHHHhh----C-CCEEEEcCchhhCCHHHHhhccCCeEEeCccc
Confidence 100 1122233344443 2 5999987654 334455555666677665543
No 185
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=41.38 E-value=34 Score=31.21 Aligned_cols=100 Identities=14% Similarity=0.035 Sum_probs=53.7
Q ss_pred EEEEEcCCCccC-----HHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCC--CeEEEEcCCCCCCCCCCccccH
Q 012194 15 HCLVLSYPAQGH-----INPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSA--SIALEAISDGYDQGGSAQAESI 87 (468)
Q Consensus 15 ~il~~~~~~~GH-----~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~--~i~f~~~~~~~~~~~~~~~~~~ 87 (468)
.|++.+....+. ..-+.++++.|.++|++|.+.+++.-.+..++..+.... ......+. ..
T Consensus 182 ~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~g~~~e~~~~~~i~~~~~~~~~~~~~~l~---------g~--- 249 (348)
T 1psw_A 182 MIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLA---------GE--- 249 (348)
T ss_dssp EEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEECT---------TT---
T ss_pred EEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEEeChhhHHHHHHHHHhhhhccccceEecc---------Cc---
Confidence 455665442222 236889999999999999887766544333311000000 00011111 00
Q ss_pred HHHHHHHHHhchHHHHHHHHHhcCCCCCccEEEeCCCcchHHHHHHHcCCceEEEcc
Q 012194 88 EAYLEKFWQIGPRSLCELVEKMNGSVVPVDCIVYDSFLPWALDVAKKFGLVGAAFLT 144 (468)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~~~~~~~~~A~~lgiP~i~~~~ 144 (468)
..+.++..-+.. -|++|+.- .+.+.+|..+|+|+|.++.
T Consensus 250 ------------~sl~e~~ali~~----a~l~I~~D--sg~~HlAaa~g~P~v~lfg 288 (348)
T 1psw_A 250 ------------TQLDQAVILIAA----CKAIVTND--SGLMHVAAALNRPLVALYG 288 (348)
T ss_dssp ------------SCHHHHHHHHHT----SSEEEEES--SHHHHHHHHTTCCEEEEES
T ss_pred ------------CCHHHHHHHHHh----CCEEEecC--CHHHHHHHHcCCCEEEEEC
Confidence 112233333332 48888753 4567788899999998764
No 186
>2r85_A PURP protein PF1517; ATP-grAsp superfamily, unknown function; HET: AMP; 1.70A {Pyrococcus furiosus} SCOP: c.30.1.8 d.142.1.9 PDB: 2r84_A* 2r86_A* 2r87_A*
Probab=41.30 E-value=22 Score=32.27 Aligned_cols=33 Identities=15% Similarity=0.101 Sum_probs=27.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
+|||+++..+ -...+++++.++||+|.++....
T Consensus 2 ~m~Ililg~g------~~~~l~~a~~~~G~~v~~~~~~~ 34 (334)
T 2r85_A 2 KVRIATYASH------SALQILKGAKDEGFETIAFGSSK 34 (334)
T ss_dssp CSEEEEESST------THHHHHHHHHHTTCCEEEESCGG
T ss_pred ceEEEEECCh------hHHHHHHHHHhCCCEEEEEECCC
Confidence 4799998876 46788999999999999888654
No 187
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=41.29 E-value=58 Score=23.93 Aligned_cols=37 Identities=8% Similarity=0.060 Sum_probs=28.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVT 48 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 48 (468)
+.+||+++|..+.|=-.-.-.+-+.+.++|.++.+-.
T Consensus 2 ~mkkIll~Cg~G~sTS~l~~k~~~~~~~~gi~~~i~a 38 (106)
T 1e2b_A 2 EKKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEA 38 (106)
T ss_dssp CCEEEEEECSSSTTTHHHHHHHHHHHHHSCCSEEEEE
T ss_pred CCcEEEEECCCchhHHHHHHHHHHHHHHCCCCeEEEE
Confidence 4468999998877655556688888888999887644
No 188
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=41.04 E-value=19 Score=27.49 Aligned_cols=40 Identities=15% Similarity=-0.009 Sum_probs=25.0
Q ss_pred HHHHHHHhcCCCCCccEEEeCCCcch--HHHHHH---HcCCceEEEc
Q 012194 102 LCELVEKMNGSVVPVDCIVYDSFLPW--ALDVAK---KFGLVGAAFL 143 (468)
Q Consensus 102 ~~~~l~~l~~~~~p~DlVI~D~~~~~--~~~~A~---~lgiP~i~~~ 143 (468)
-.+.++.+.+ .+||+||.|...+. |..+++ ..++|.|.++
T Consensus 42 g~eAl~~~~~--~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~lT 86 (123)
T 2lpm_A 42 MQEALDIARK--GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFAT 86 (123)
T ss_dssp HHHHHHHHHH--CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCBC
T ss_pred HHHHHHHHHh--CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEEe
Confidence 3444444443 34799999987743 455543 4578987754
No 189
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=40.72 E-value=1.5e+02 Score=24.19 Aligned_cols=143 Identities=16% Similarity=0.160 Sum_probs=77.5
Q ss_pred CceEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEEeecchHHHhcccCcceeeec
Q 012194 280 GSVVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQLEVLAHEAAGCFLTH 359 (468)
Q Consensus 280 ~~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~I~H 359 (468)
+|.|-|=+||.. +....+++.+.|++++..+-..+-+.+. .|+.. .+|+ .-...-.++.+|.=
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SAHR--tp~~l----------~~~~---~~a~~~g~~ViIa~ 84 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAHR--TPDYM----------FEYA---ETARERGLKVIIAG 84 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--SHHHH----------HHHH---HHTTTTTCCEEEEE
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcccc--ChHHH----------HHHH---HHHHhcCceEEEEe
Confidence 567888899876 5677888999999998775544433322 11111 0110 00111123337877
Q ss_pred CCcchHHHHH---HcCCceeeccccc---chhHHHHHHHhhhcceeEecCCCCCccC------HHHHHHHHHHHhcCccH
Q 012194 360 CGWNSTMEAL---SLGVPMVAMPQWS---DQSTNGKYIMDVWKMGLKVPADEKGIVR------REAIAHCISEILEGERG 427 (468)
Q Consensus 360 gG~~s~~Eal---~~GvP~l~~P~~~---DQ~~na~~l~~~~g~G~~l~~~~~~~~~------~~~l~~~i~~ll~~~~~ 427 (468)
+|.-.-+-.+ ..-+|+|.+|... +-.+.-.-+.+. =-|+.+-.- ..+ +.-+...|-. +.|+
T Consensus 85 AG~aahLpGvvAa~T~~PVIGVPv~s~~l~G~DsLlSivQM-P~GvpVaTv---aig~~ga~NAallA~qILa-~~d~-- 157 (181)
T 4b4k_A 85 AGGAAHLPGMVAAKTNLPVIGVPVQSKALNGLDSLLSIVQM-PGGVPVATV---AIGKAGSTNAGLLAAQILG-SFHD-- 157 (181)
T ss_dssp ECSSCCHHHHHHTTCCSCEEEEECCCTTTTTHHHHHHHHTC-CTTCCCEEC---CSSHHHHHHHHHHHHHHHT-TTCH--
T ss_pred ccccccchhhHHhcCCCCEEEEecCCCCccchhhHHHHHhC-CCCCceEEE---ecCCccHHHHHHHHHHHHc-cCCH--
Confidence 6654333332 3568999999854 333334444444 335433321 122 2223333322 3564
Q ss_pred HHHHHHHHHHHHHHHHHHHc
Q 012194 428 KEIRQNAGKWSNFAKEAVAK 447 (468)
Q Consensus 428 ~~~~~~a~~~~~~~~~~~~~ 447 (468)
+++++.+.+++..++.+.+
T Consensus 158 -~l~~kl~~~r~~~~~~v~~ 176 (181)
T 4b4k_A 158 -DIHDALELRREAIEKDVRE 176 (181)
T ss_dssp -HHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHH
Confidence 8999998888888765443
No 190
>2pn1_A Carbamoylphosphate synthase large subunit; ZP_00538348.1, ATP-grAsp domain, carbamoylphosphate synthase subunit (split gene in MJ); 2.00A {Exiguobacterium sibiricum}
Probab=40.43 E-value=30 Score=31.32 Aligned_cols=34 Identities=12% Similarity=0.076 Sum_probs=25.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC-C-CeEEEEeCC
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHK-G-LKVTLVTTY 50 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r-G-h~Vt~~~~~ 50 (468)
|++|||+++..+.. +++++.|++. | ++|..+...
T Consensus 2 m~~~~Ili~g~g~~------~~l~~~l~~~~~~~~v~~~d~~ 37 (331)
T 2pn1_A 2 MQKPHLLITSAGRR------AKLVEYFVKEFKTGRVSTADCS 37 (331)
T ss_dssp TTCCEEEEESCTTC------HHHHHHHHHHCCSSEEEEEESC
T ss_pred CccceEEEecCCch------HHHHHHHHHhcCCCEEEEEeCC
Confidence 56689999866655 4789999886 7 888877654
No 191
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=40.23 E-value=46 Score=28.62 Aligned_cols=39 Identities=18% Similarity=0.198 Sum_probs=27.2
Q ss_pred HHHHHHHhcCCCCCccEEEeCCCcc-------hHHHHHHHcCCceEEEc
Q 012194 102 LCELVEKMNGSVVPVDCIVYDSFLP-------WALDVAKKFGLVGAAFL 143 (468)
Q Consensus 102 ~~~~l~~l~~~~~p~DlVI~D~~~~-------~~~~~A~~lgiP~i~~~ 143 (468)
+.++++++. ..||+|++|.... .|..+.-.+++|+|.+.
T Consensus 97 ll~al~~L~---~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 142 (237)
T 3goc_A 97 VLAALDALP---CPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGVA 142 (237)
T ss_dssp HHHHHHTSS---SCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEEE
T ss_pred HHHHHHhcC---CCCCEEEEeCceeecCCCcchhheeeeecCCCEEeee
Confidence 334444444 3469999998652 26777888999999975
No 192
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=40.17 E-value=36 Score=28.91 Aligned_cols=40 Identities=10% Similarity=0.112 Sum_probs=28.3
Q ss_pred CCCc-EEEEEcCCCccCH----HHHHHHHHHHHhCCCeEEEEeCC
Q 012194 11 CRLV-HCLVLSYPAQGHI----NPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 11 ~~~~-~il~~~~~~~GH~----~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
.++| +|.+++....+-- .-...|++.|+++|+.|+.-...
T Consensus 10 ~~~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGGg~ 54 (215)
T 2a33_A 10 KSKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGS 54 (215)
T ss_dssp CCSCSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCCS
T ss_pred cCCCCeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECCCh
Confidence 3455 5889976666532 34568888999999999876654
No 193
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=39.92 E-value=31 Score=29.55 Aligned_cols=34 Identities=3% Similarity=-0.043 Sum_probs=23.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
..|+++++.++.| + =.++++.|.++|++|.++.-
T Consensus 6 ~~k~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~r 39 (241)
T 1dhr_A 6 EARRVLVYGGRGA-L--GSRCVQAFRARNWWVASIDV 39 (241)
T ss_dssp CCCEEEEETTTSH-H--HHHHHHHHHTTTCEEEEEES
T ss_pred CCCEEEEECCCcH-H--HHHHHHHHHhCCCEEEEEeC
Confidence 3456666655543 2 25789999999999988764
No 194
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=39.81 E-value=12 Score=31.70 Aligned_cols=32 Identities=6% Similarity=0.203 Sum_probs=24.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
|||+++..|..| ..+++.|.++||+|+++...
T Consensus 1 M~iiIiG~G~~G-----~~la~~L~~~g~~v~vid~~ 32 (218)
T 3l4b_C 1 MKVIIIGGETTA-----YYLARSMLSRKYGVVIINKD 32 (218)
T ss_dssp CCEEEECCHHHH-----HHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECCCHHH-----HHHHHHHHhCCCeEEEEECC
Confidence 678877644333 47899999999999998854
No 195
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=39.69 E-value=1.2e+02 Score=25.22 Aligned_cols=137 Identities=10% Similarity=0.041 Sum_probs=74.7
Q ss_pred eEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEEee-----cchHHHhcccCccee
Q 012194 282 VVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVVNW-----CPQLEVLAHEAAGCF 356 (468)
Q Consensus 282 ~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~-----vpq~~lL~~~~~~~~ 356 (468)
+++.-.|+..... ...+++.|.+.|..+-++.......-+.+...+.+.++++.--| +.+..+...+|+ ++
T Consensus 11 IllgvTGs~aa~k---~~~l~~~L~~~g~~V~vv~T~~A~~fi~~~~~~~l~~~v~~~~~~~~~~~~hi~l~~~aD~-~v 86 (194)
T 1p3y_1 11 LLIGICGSISSVG---ISSYLLYFKSFFKEIRVVMTKTAEDLIPAHTVSYFCDHVYSEHGENGKRHSHVEIGRWADI-YC 86 (194)
T ss_dssp EEEEECSCGGGGG---THHHHHHHTTTSSEEEEEECHHHHHHSCHHHHGGGSSEEECTTCSSSCCCCHHHHHHHCSE-EE
T ss_pred EEEEEECHHHHHH---HHHHHHHHHHCCCEEEEEEchhHHHHHHHHHHHHhcCCEeccccccCCCcCcccccccCCE-EE
Confidence 5666666665422 23455556666776655553322211222212234444221112 445566666775 35
Q ss_pred eecCCcchHH-------------HHHHcCCceeecccccch-------hHHHHHHHhhhcceeEecCCCC----------
Q 012194 357 LTHCGWNSTM-------------EALSLGVPMVAMPQWSDQ-------STNGKYIMDVWKMGLKVPADEK---------- 406 (468)
Q Consensus 357 I~HgG~~s~~-------------Eal~~GvP~l~~P~~~DQ-------~~na~~l~~~~g~G~~l~~~~~---------- 406 (468)
|.=+-.||+. -++..++|++++|-.+++ ..|..++.+. |+ ..+++.+.
T Consensus 87 IaPaTanTlAKiA~GiaDnLlt~~a~a~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~~-G~-~iv~p~~g~~f~lacg~~ 164 (194)
T 1p3y_1 87 IIPATANILGQTANGVAMNLVATTVLAHPHNTIFFPNMNDLMWNKTVVSRNIEQLRKD-GH-IVIEPVEIMAFEIATGTR 164 (194)
T ss_dssp EEEECHHHHHHHHTTCCSSHHHHHHHHSSSCCEEEECCCHHHHTCHHHHHHHHHHHHH-TC-EECCCBCCC---------
T ss_pred EeCCCHHHHHHHHhhccCCHHHHHHHHcCCCEEEEECCChhhcCCHHHHHHHHHHHHC-CC-EEECCCCCcccccccCCc
Confidence 5555555433 235678999999964432 4578888887 76 33333322
Q ss_pred ---C-ccCHHHHHHHHHHHhcC
Q 012194 407 ---G-IVRREAIAHCISEILEG 424 (468)
Q Consensus 407 ---~-~~~~~~l~~~i~~ll~~ 424 (468)
+ -.+.++|.+.+.+.+.+
T Consensus 165 g~~g~~~~~~~iv~~v~~~l~~ 186 (194)
T 1p3y_1 165 KPNRGLITPDKALLAIEKGFKE 186 (194)
T ss_dssp ---CBCCCHHHHHHHHHHHCC-
T ss_pred CcCCCCCCHHHHHHHHHHHhcc
Confidence 1 24688888888888865
No 196
>2zqe_A MUTS2 protein; alpha/beta, ATP-binding, DNA-binding, nucleotide-binding, DN protein; 1.70A {Thermus thermophilus}
Probab=39.64 E-value=3.2 Score=29.36 Aligned_cols=57 Identities=14% Similarity=0.035 Sum_probs=30.0
Q ss_pred HHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEEeecchH-HHhcccCcceeeecCCcchH
Q 012194 297 EMEELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQL-EVLAHEAAGCFLTHCGWNST 365 (468)
Q Consensus 297 ~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~-~lL~~~~~~~~I~HgG~~s~ 365 (468)
.+..+++.....+.+.++++.+.+...+... +..|+.+. .+...... --.|||.|.+
T Consensus 20 ~l~~fl~~a~~~g~~~v~IIHGkG~GvLr~~----------V~~~L~~~~~V~~f~~a--~~~~GG~Gat 77 (83)
T 2zqe_A 20 EVDQALEEARALGLSTLRLLHGKGTGALRQA----------IREALRRDKRVESFADA--PPGEGGHGVT 77 (83)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCSTTSHHHHH----------HHHHHHHCTTEEEEEEC--CTTTTGGGEE
T ss_pred HHHHHHHHHHHCCCCEEEEEECCCchHHHHH----------HHHHHhcCCceeEEEEc--CcccCCCEEE
Confidence 3444555555667777777766544333222 33454443 34444444 4567777754
No 197
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=39.58 E-value=25 Score=25.85 Aligned_cols=33 Identities=18% Similarity=0.079 Sum_probs=23.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeCC
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKG-LKVTLVTTY 50 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rG-h~Vt~~~~~ 50 (468)
.++|+++..|..| ..+++.|.++| |+|+.+...
T Consensus 5 ~~~v~I~G~G~iG-----~~~~~~l~~~g~~~v~~~~r~ 38 (118)
T 3ic5_A 5 RWNICVVGAGKIG-----QMIAALLKTSSNYSVTVADHD 38 (118)
T ss_dssp CEEEEEECCSHHH-----HHHHHHHHHCSSEEEEEEESC
T ss_pred cCeEEEECCCHHH-----HHHHHHHHhCCCceEEEEeCC
Confidence 4688887543334 46788999999 999887753
No 198
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=39.56 E-value=46 Score=24.57 Aligned_cols=43 Identities=9% Similarity=-0.029 Sum_probs=31.4
Q ss_pred EEEE-EcCCCc--cCHHHHHHHHHHHHhC-CC-eEEEEeCCccccccc
Q 012194 15 HCLV-LSYPAQ--GHINPLLQFAKRLDHK-GL-KVTLVTTYFISKSLH 57 (468)
Q Consensus 15 ~il~-~~~~~~--GH~~p~l~La~~L~~r-Gh-~Vt~~~~~~~~~~~~ 57 (468)
|+++ ++.+.+ ......+.+|..+.+. || +|+++...+......
T Consensus 3 k~~ii~~~~p~~~~~~~~al~~a~~~~~~~g~~~v~vff~~dgV~~~~ 50 (117)
T 1jx7_A 3 KIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSDAVTAGL 50 (117)
T ss_dssp EEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEECGGGGGGGB
T ss_pred EEEEEEcCCCCCcHHHHHHHHHHHHHHhcCCCccEEEEEEchHHHHHh
Confidence 5654 444423 4456679999999999 99 999888877776666
No 199
>3kkl_A Probable chaperone protein HSP33; peptidase, heat shock protein, hydrolase, protease, stress response; 2.03A {Saccharomyces cerevisiae} PDB: 3mii_A*
Probab=39.48 E-value=49 Score=28.67 Aligned_cols=38 Identities=16% Similarity=0.256 Sum_probs=26.9
Q ss_pred cEEEEEcCCCcc-----------CHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 14 VHCLVLSYPAQG-----------HINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 14 ~~il~~~~~~~G-----------H~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
+||+++.....+ ...=++.....|.+.|++|+++++..
T Consensus 4 ~kvlivlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~iaS~~g 52 (244)
T 3kkl_A 4 KRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETG 52 (244)
T ss_dssp CEEEEECCCCCCCCSTTSCCCCBCHHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CEEEEEECCCCcccCCCCCcCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 588876554321 22446777888999999999999753
No 200
>2c5m_A CTP synthase; cytidine 5-prime triphosphate synthetase, CTP synthetase, UTP, glutamine, amidotransferase, ligase, phosphorylation; 2.80A {Homo sapiens} PDB: 2vo1_A 3ihl_A*
Probab=39.45 E-value=22 Score=31.05 Aligned_cols=44 Identities=14% Similarity=0.029 Sum_probs=34.8
Q ss_pred CCcEEEEEcCC---CccCHHHHHHHHHHHHhCCCeEEEEeCCccccc
Q 012194 12 RLVHCLVLSYP---AQGHINPLLQFAKRLDHKGLKVTLVTTYFISKS 55 (468)
Q Consensus 12 ~~~~il~~~~~---~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~ 55 (468)
.+||.+|++.| +-|-=.-.-.|+..|..||++|+..=.+.+.+.
T Consensus 21 ~~mKyIfVTGGVvSglGKGi~aaSlG~LLk~rG~~Vt~~KiDPYlNv 67 (294)
T 2c5m_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPYINI 67 (294)
T ss_dssp CCCEEEEEEECSSTTSCHHHHHHHHHHHHHTTTCCEECCEEECBCCC
T ss_pred eceEEEEEcCccccccchHHHHHHHHHHHHHCCCeeEEEecCCceee
Confidence 46899999876 446667889999999999999998766655543
No 201
>3tqr_A Phosphoribosylglycinamide formyltransferase; purines, pyrimidines, nucleosides, nucleotides; HET: NHE; 1.97A {Coxiella burnetii} SCOP: c.65.1.0
Probab=39.13 E-value=77 Score=26.84 Aligned_cols=105 Identities=10% Similarity=0.072 Sum_probs=57.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCcc----ccccccCCCCCCCCeEEEEcCCC-CCCCCCCccc
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDH-KGLKVTLVTTYFI----SKSLHRDSSSSSASIALEAISDG-YDQGGSAQAE 85 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~~~----~~~~~~~~~~~~~~i~f~~~~~~-~~~~~~~~~~ 85 (468)
+++||+++.+|+.+-+.. |.++..+ .+++|..+.+... .+.+++. |+.+..++.. ++.
T Consensus 4 ~~~riavl~SG~Gsnl~a---ll~~~~~~~~~eI~~Vis~~~~a~~~~~A~~~------gIp~~~~~~~~~~~------- 67 (215)
T 3tqr_A 4 EPLPIVVLISGNGTNLQA---IIGAIQKGLAIEIRAVISNRADAYGLKRAQQA------DIPTHIIPHEEFPS------- 67 (215)
T ss_dssp CCEEEEEEESSCCHHHHH---HHHHHHTTCSEEEEEEEESCTTCHHHHHHHHT------TCCEEECCGGGSSS-------
T ss_pred CCcEEEEEEeCCcHHHHH---HHHHHHcCCCCEEEEEEeCCcchHHHHHHHHc------CCCEEEeCccccCc-------
Confidence 468999887776544443 4444443 3688887665322 1234433 7887777521 111
Q ss_pred cHHHHHHHHHHhchHHHHHHHHHhcCCCCCccEEEeCCCc-chHHHHHHHcCCceEEEcccc
Q 012194 86 SIEAYLEKFWQIGPRSLCELVEKMNGSVVPVDCIVYDSFL-PWALDVAKKFGLVGAAFLTQS 146 (468)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~~~-~~~~~~A~~lgiP~i~~~~~~ 146 (468)
-. .....+.+.++++ . +|+||+-.+. .....+-+.....++-+.++.
T Consensus 68 -r~--------~~d~~~~~~l~~~----~-~Dliv~agy~~il~~~~l~~~~~~~iNiHpSL 115 (215)
T 3tqr_A 68 -RT--------DFESTLQKTIDHY----D-PKLIVLAGFMRKLGKAFVSHYSGRMINIHPSL 115 (215)
T ss_dssp -HH--------HHHHHHHHHHHTT----C-CSEEEESSCCSCCCHHHHHHTTTSEEEEESSS
T ss_pred -hh--------HhHHHHHHHHHhc----C-CCEEEEccchhhCCHHHHhhccCCeEEeCccc
Confidence 00 0112233334443 2 5999987765 444556666666777766543
No 202
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=38.99 E-value=98 Score=25.19 Aligned_cols=112 Identities=8% Similarity=0.054 Sum_probs=63.7
Q ss_pred ceEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEE---EeecchHHHhcccCcceee
Q 012194 281 SVVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLV---VNWCPQLEVLAHEAAGCFL 357 (468)
Q Consensus 281 ~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~---~~~vpq~~lL~~~~~~~~I 357 (468)
.+++.-.|+.... ..-.+++.+.+.|..+-++.......-+.+...+.+.+.++. ..|+++..+-..+|+ ++|
T Consensus 7 ~IllgvTGs~aa~---k~~~ll~~L~~~g~~V~vv~T~~A~~fi~~~~l~~l~~~v~~~~~~~~~~hi~l~~~aD~-~vV 82 (175)
T 3qjg_A 7 NVLICLCGSVNSI---NISHYIIELKSKFDEVNVIASTNGRKFINGEILKQFCDNYYDEFEDPFLNHVDIANKHDK-III 82 (175)
T ss_dssp EEEEEECSSGGGG---GHHHHHHHHTTTCSEEEEEECTGGGGGSCHHHHHHHCSCEECTTTCTTCCHHHHHHTCSE-EEE
T ss_pred EEEEEEeCHHHHH---HHHHHHHHHHHCCCEEEEEECcCHHHHhhHHHHHHhcCCEEecCCCCccccccccchhCE-EEE
Confidence 3666666666543 244566777777877666665443333333222223332221 134666677666776 355
Q ss_pred ecCCcchHH-------------HHHHcCCceeecccccch-------hHHHHHHHhhhcc
Q 012194 358 THCGWNSTM-------------EALSLGVPMVAMPQWSDQ-------STNGKYIMDVWKM 397 (468)
Q Consensus 358 ~HgG~~s~~-------------Eal~~GvP~l~~P~~~DQ-------~~na~~l~~~~g~ 397 (468)
-=+-.||+. -++..++|++++|-.+.+ ..|..++.+. |+
T Consensus 83 aPaTanTlakiA~GiaDnLlt~~~la~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~~-G~ 141 (175)
T 3qjg_A 83 LPATSNTINKIANGICDNLLLTICHTAFEKLSIFPNMNLRMWENPVTQNNIRLLKDY-GV 141 (175)
T ss_dssp EEECHHHHHHHHTTCCCSHHHHHHHTCGGGEEEEECEEHHHHTCHHHHHHHHHHHHT-TC
T ss_pred eeCCHHHHHHHHccccCCHHHHHHHHcCCCEEEEecCChhhhcCHHHHHHHHHHHHC-CC
Confidence 555555432 347779999999954322 4577888887 75
No 203
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=38.50 E-value=16 Score=31.03 Aligned_cols=34 Identities=12% Similarity=0.219 Sum_probs=26.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
|+.|||.|+..|..| ..+|+.|.+.||+|+++..
T Consensus 21 m~mmkI~IIG~G~mG-----~~la~~l~~~g~~V~~v~~ 54 (220)
T 4huj_A 21 QSMTTYAIIGAGAIG-----SALAERFTAAQIPAIIANS 54 (220)
T ss_dssp GGSCCEEEEECHHHH-----HHHHHHHHHTTCCEEEECT
T ss_pred hcCCEEEEECCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 445799999866655 4678899999999998443
No 204
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=38.28 E-value=25 Score=31.71 Aligned_cols=33 Identities=21% Similarity=0.270 Sum_probs=26.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
..|||.|+..|..| ..+|+.|+++||+|+++..
T Consensus 20 ~m~~I~iIG~G~mG-----~~~A~~l~~~G~~V~~~dr 52 (310)
T 3doj_A 20 HMMEVGFLGLGIMG-----KAMSMNLLKNGFKVTVWNR 52 (310)
T ss_dssp CSCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred cCCEEEEECccHHH-----HHHHHHHHHCCCeEEEEeC
Confidence 45799999777666 5688999999999998754
No 205
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=38.27 E-value=19 Score=27.92 Aligned_cols=34 Identities=18% Similarity=0.294 Sum_probs=27.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
+.||+++..|..| ..+++.|.++||+|+++....
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 4689888776555 478899999999999998654
No 206
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=38.27 E-value=21 Score=32.72 Aligned_cols=38 Identities=5% Similarity=0.106 Sum_probs=28.1
Q ss_pred CCcEEEEEcCCCccCHH----HHHHHHHHHHhCCCeEEEEeC
Q 012194 12 RLVHCLVLSYPAQGHIN----PLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~----p~l~La~~L~~rGh~Vt~~~~ 49 (468)
++|||+++..|..+-.. -..+++++|.+.||+|..+..
T Consensus 2 ~~~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~ 43 (343)
T 1e4e_A 2 NRIKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLYIGI 43 (343)
T ss_dssp CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEE
T ss_pred CCcEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEEEEE
Confidence 46899988765444333 456788999999999998764
No 207
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=38.20 E-value=39 Score=27.87 Aligned_cols=40 Identities=23% Similarity=0.312 Sum_probs=27.0
Q ss_pred CCCcEEEEEcCCCccCHHHHH-HHHHHHHhCCCeEEEEeCC
Q 012194 11 CRLVHCLVLSYPAQGHINPLL-QFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l-~La~~L~~rGh~Vt~~~~~ 50 (468)
|..|||+++.....|+..-+. .+++.|.+.|++|.++.-.
T Consensus 3 M~M~kilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l~ 43 (200)
T 2a5l_A 3 MSSPYILVLYYSRHGATAEMARQIARGVEQGGFEARVRTVP 43 (200)
T ss_dssp --CCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEBCC
T ss_pred CCcceEEEEEeCCCChHHHHHHHHHHHHhhCCCEEEEEEhh
Confidence 334689877666678766544 4567777789999887643
No 208
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=38.10 E-value=50 Score=28.17 Aligned_cols=30 Identities=13% Similarity=0.028 Sum_probs=22.6
Q ss_pred CccEEEeCCCcch-------HHHHHHHcCCceEEEcc
Q 012194 115 PVDCIVYDSFLPW-------ALDVAKKFGLVGAAFLT 144 (468)
Q Consensus 115 p~DlVI~D~~~~~-------~~~~A~~lgiP~i~~~~ 144 (468)
.+|+|++|..... |..+...+++|+|.+.=
T Consensus 103 ~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGVAK 139 (225)
T 2w36_A 103 KPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGVAK 139 (225)
T ss_dssp CCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEEES
T ss_pred CCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEEEe
Confidence 4699999987532 55667777999999753
No 209
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=37.82 E-value=32 Score=30.16 Aligned_cols=38 Identities=16% Similarity=0.223 Sum_probs=26.2
Q ss_pred cCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 10 SCRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
++-..|+++++.++.| + =.+++++|+++|++|.+....
T Consensus 21 ~~~~~k~vlITGas~g-I--G~~~a~~l~~~G~~v~~~~~~ 58 (269)
T 3gk3_A 21 SMQAKRVAFVTGGMGG-L--GAAISRRLHDAGMAVAVSHSE 58 (269)
T ss_dssp ---CCCEEEETTTTSH-H--HHHHHHHHHTTTCEEEEEECS
T ss_pred hhhcCCEEEEECCCch-H--HHHHHHHHHHCCCEEEEEcCC
Confidence 3445678888877653 2 257899999999999887643
No 210
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=37.56 E-value=42 Score=27.26 Aligned_cols=51 Identities=14% Similarity=0.253 Sum_probs=36.3
Q ss_pred CchhhhhhhcCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 1 MENIEKKAASCRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 1 ~~~~~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
|.-++.+...++.+.|++...++.|=-.-.-.|++.|..+|++|.++....
T Consensus 1 ~~~~~~~~~~~~~~~i~l~G~~GsGKsT~~~~L~~~l~~~~~~~~~~~~d~ 51 (186)
T 2yvu_A 1 MQALTTYKCIEKGIVVWLTGLPGSGKTTIATRLADLLQKEGYRVEVLDGDW 51 (186)
T ss_dssp -------CCCSCCEEEEEECCTTSSHHHHHHHHHHHHHHTTCCEEEEEHHH
T ss_pred CcccccccccCCCcEEEEEcCCCCCHHHHHHHHHHHHHhcCCeEEEeeHHH
Confidence 334445545566678888888899999999999999999999998876543
No 211
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=37.55 E-value=49 Score=24.49 Aligned_cols=39 Identities=10% Similarity=0.070 Sum_probs=25.6
Q ss_pred cCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012194 10 SCRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVT 48 (468)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 48 (468)
..+.|||+++|.++.+=-.-.-.+-++..++|.+|.+..
T Consensus 3 ~~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi~v~i~a 41 (108)
T 3nbm_A 3 ASKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANS 41 (108)
T ss_dssp --CCEEEEEEESSSSHHHHHHHHHHHHHHHHTCSEEEEE
T ss_pred cccCceEEEECCCCCCHHHHHHHHHHHHHHCCCceEEEE
Confidence 456799999998876443333444455555799998855
No 212
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=37.36 E-value=29 Score=31.51 Aligned_cols=34 Identities=24% Similarity=0.154 Sum_probs=23.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
.|+|++... .|.+- ..|+++|.++||+|+.+.-.
T Consensus 3 ~~~vlVtGa--tG~iG--~~l~~~L~~~G~~V~~~~r~ 36 (345)
T 2z1m_A 3 GKRALITGI--RGQDG--AYLAKLLLEKGYEVYGADRR 36 (345)
T ss_dssp CCEEEEETT--TSHHH--HHHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECC--CChHH--HHHHHHHHHCCCEEEEEECC
Confidence 467766543 34333 46788999999999988643
No 213
>1q1v_A DEK protein; winged-helix motif, DNA binding protein; NMR {Homo sapiens} SCOP: a.159.4.1
Probab=37.33 E-value=67 Score=21.62 Aligned_cols=55 Identities=16% Similarity=0.101 Sum_probs=31.0
Q ss_pred CccCHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHH--HcCCCcHHHHHHHHHHHH
Q 012194 407 GIVRREAIAHCISEILEGERGKEIRQNAGKWSNFAKEAV--AKGGSSDKNIDDFVANLI 463 (468)
Q Consensus 407 ~~~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~--~~~g~~~~~~~~~~~~l~ 463 (468)
+..|.++|.++|+.+|.+.+..++.. +++++.+.+.. -+-...-.+|...|....
T Consensus 10 ~~Psd~ei~~~I~~IL~~aDL~tvT~--K~VR~~Le~~~pg~dLs~kK~~I~~~I~~~L 66 (70)
T 1q1v_A 10 KPPTDEELKETIKKLLASANLEEVTM--KQICKKVYENYPTYDLTERKDFIKTTVKELI 66 (70)
T ss_dssp CCCCHHHHHHHHHHHHTTSCGGGCCH--HHHHHHHHHHCSSSCCSHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHhCCHHHHhH--HHHHHHHHHHccCCCChHHHHHHHHHHHHHH
Confidence 36789999999999998765434332 33444444331 011112445555555544
No 214
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=37.22 E-value=18 Score=33.55 Aligned_cols=38 Identities=5% Similarity=0.023 Sum_probs=27.4
Q ss_pred CCcEEEEEcCCCccCHH----HHHHHHHHHHhCCCeEEEEeC
Q 012194 12 RLVHCLVLSYPAQGHIN----PLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~----p~l~La~~L~~rGh~Vt~~~~ 49 (468)
.+|||+++..|-.+... -...++++|.++||+|..+..
T Consensus 2 ~~~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i~~ 43 (364)
T 2i87_A 2 TKENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDIIYI 43 (364)
T ss_dssp -CEEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEEEE
T ss_pred CCcEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEEEE
Confidence 46899988765444332 346788999999999998864
No 215
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=37.13 E-value=34 Score=30.50 Aligned_cols=33 Identities=18% Similarity=0.209 Sum_probs=25.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
++|||.|+..|..|. .+++.|.+.||+|+++..
T Consensus 3 ~~~~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 35 (301)
T 3cky_A 3 KSIKIGFIGLGAMGK-----PMAINLLKEGVTVYAFDL 35 (301)
T ss_dssp -CCEEEEECCCTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCEEEEECccHHHH-----HHHHHHHHCCCeEEEEeC
Confidence 358999998777664 457888899999987654
No 216
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=36.96 E-value=25 Score=29.56 Aligned_cols=34 Identities=12% Similarity=0.167 Sum_probs=25.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
-..|+|.++..|..| ..+|+.|.++||+|+++..
T Consensus 17 ~~~~~I~iiG~G~mG-----~~la~~l~~~g~~V~~~~~ 50 (209)
T 2raf_A 17 FQGMEITIFGKGNMG-----QAIGHNFEIAGHEVTYYGS 50 (209)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECT
T ss_pred cCCCEEEEECCCHHH-----HHHHHHHHHCCCEEEEEcC
Confidence 346899999876666 5678899999999998753
No 217
>3q0i_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; 1.89A {Vibrio cholerae}
Probab=36.80 E-value=45 Score=30.29 Aligned_cols=34 Identities=12% Similarity=0.070 Sum_probs=23.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
|++|||+|+..+..+ ....++|.++||+|..+.+
T Consensus 5 ~~~mrivf~Gt~~fa-----~~~L~~L~~~~~~v~~Vvt 38 (318)
T 3q0i_A 5 SQSLRIVFAGTPDFA-----ARHLAALLSSEHEIIAVYT 38 (318)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHTSSSEEEEEEC
T ss_pred ccCCEEEEEecCHHH-----HHHHHHHHHCCCcEEEEEc
Confidence 568999998776332 3456778888999986665
No 218
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=36.73 E-value=95 Score=25.12 Aligned_cols=99 Identities=23% Similarity=0.203 Sum_probs=54.8
Q ss_pred hhHhHhhhcCCCCceEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeC--CccCCCCcchhhhccCCeEEEeecchH
Q 012194 268 ESCIKWLNDRAKGSVVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRE--SEQAKLPENFSDETSQKGLVVNWCPQL 345 (468)
Q Consensus 268 ~~~~~~l~~~~~~~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~nv~~~~~vpq~ 345 (468)
.++-++|..+ +..+||-|.. -......++..+.+-++|-+++. ...+..+..+. +...+++..+..
T Consensus 23 ~~lg~~La~~---g~~lV~Ggg~-----GiM~aa~~gAl~~gG~tiGV~~~~~~p~e~~~~~~~----~~~~~~~~f~~R 90 (171)
T 1weh_A 23 VRYGEVLAEE---GFGLACGGYQ-----GGMEALARGVKAKGGLVVGVTAPAFFPERRGPNPFV----DLELPAATLPQR 90 (171)
T ss_dssp HHHHHHHHHT---TEEEEECCSS-----THHHHHHHHHHHTTCCEEECCCGGGCTTSCSSCTTC----SEECCCSSHHHH
T ss_pred HHHHHHHHHC---CCEEEeCChh-----hHHHHHHHHHHHcCCcEEEEeccccCcccccccCCC----ceeeecCCHHHH
Confidence 3455666654 3777777764 24555566666666676655433 11111222111 112234556654
Q ss_pred -HHhcccCcceeeecCCcchHHHH---HH-------cCCceeecc
Q 012194 346 -EVLAHEAAGCFLTHCGWNSTMEA---LS-------LGVPMVAMP 379 (468)
Q Consensus 346 -~lL~~~~~~~~I~HgG~~s~~Ea---l~-------~GvP~l~~P 379 (468)
.++..-+-..++--||.||.-|. +. +++| +.+-
T Consensus 91 k~~~~~~sda~ivlpGG~GTl~El~e~lt~~q~g~~~~kP-vll~ 134 (171)
T 1weh_A 91 IGRLLDLGAGYLALPGGVGTLAELVLAWNLLYLRRGVGRP-LAVD 134 (171)
T ss_dssp HHHHHHHEEEEEECSCCHHHHHHHHHHHHHHHTCSSCSCC-EEEC
T ss_pred HHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhCccCCCe-EEEC
Confidence 55543333467888999997665 44 7899 7774
No 219
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=36.72 E-value=32 Score=30.93 Aligned_cols=80 Identities=10% Similarity=0.124 Sum_probs=47.4
Q ss_pred eEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEEeecchHHHhcccCcceeeecCC
Q 012194 282 VVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQLEVLAHEAAGCFLTHCG 361 (468)
Q Consensus 282 ~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~I~HgG 361 (468)
.|+++--|......+....+...|.+.+..+.+..... +.+.. ..+. ++....++ +|.-||
T Consensus 12 ~vi~Np~sG~~~~~~~~~~i~~~l~~~~~~~~~~~t~~-----~~~a~----------~~~~--~~~~~~d~--vv~~GG 72 (304)
T 3s40_A 12 LLIVNPKAGQGDLHTNLTKIVPPLAAAFPDLHILHTKE-----QGDAT----------KYCQ--EFASKVDL--IIVFGG 72 (304)
T ss_dssp EEEECTTCSSSCHHHHHHHHHHHHHHHCSEEEEEECCS-----TTHHH----------HHHH--HHTTTCSE--EEEEEC
T ss_pred EEEECcccCCCchHHHHHHHHHHHHHcCCeEEEEEccC-----cchHH----------HHHH--HhhcCCCE--EEEEcc
Confidence 45555544333234556777778888777765443221 11100 0001 11234566 999999
Q ss_pred cchHHHHHH------cCCceeeccc
Q 012194 362 WNSTMEALS------LGVPMVAMPQ 380 (468)
Q Consensus 362 ~~s~~Eal~------~GvP~l~~P~ 380 (468)
=||+.|++. .++|+.++|.
T Consensus 73 DGTl~~v~~~l~~~~~~~~l~iiP~ 97 (304)
T 3s40_A 73 DGTVFECTNGLAPLEIRPTLAIIPG 97 (304)
T ss_dssp HHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred chHHHHHHHHHhhCCCCCcEEEecC
Confidence 999999875 5789999996
No 220
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=36.66 E-value=1.3e+02 Score=25.57 Aligned_cols=145 Identities=11% Similarity=0.005 Sum_probs=77.4
Q ss_pred CCceEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhc-cCCeEEEeecchHHHhcccCcceee
Q 012194 279 KGSVVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDET-SQKGLVVNWCPQLEVLAHEAAGCFL 357 (468)
Q Consensus 279 ~~~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~nv~~~~~vpq~~lL~~~~~~~~I 357 (468)
.++++.|..|.++ ...+..|.+.|..+.++-+. +.+.+.+.. ..++.+....-+...|..+++ +|
T Consensus 31 gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~-----~~~~l~~l~~~~~i~~i~~~~~~~dL~~adL--VI 96 (223)
T 3dfz_A 31 GRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPT-----VSAEINEWEAKGQLRVKRKKVGEEDLLNVFF--IV 96 (223)
T ss_dssp TCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSS-----CCHHHHHHHHTTSCEEECSCCCGGGSSSCSE--EE
T ss_pred CCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCC-----CCHHHHHHHHcCCcEEEECCCCHhHhCCCCE--EE
Confidence 4557777766543 34456677778887655432 222221111 134555433333456778888 99
Q ss_pred ecCCcchHHHHHHc----CCceeecccccchhHHH-----HHHHhhhcceeEecCCCCCccCHHHHHHHHHHHhcCccHH
Q 012194 358 THCGWNSTMEALSL----GVPMVAMPQWSDQSTNG-----KYIMDVWKMGLKVPADEKGIVRREAIAHCISEILEGERGK 428 (468)
Q Consensus 358 ~HgG~~s~~Eal~~----GvP~l~~P~~~DQ~~na-----~~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~~~ 428 (468)
.--|.-.+.+.++. |+|+-+ .|.+..+ ..+.+- ++-+.+........-+..|++.|..+|... ..
T Consensus 97 aAT~d~~~N~~I~~~ak~gi~VNv----vD~p~~~~f~~Paiv~rg-~l~iaIST~G~sP~la~~iR~~ie~~lp~~-~~ 170 (223)
T 3dfz_A 97 VATNDQAVNKFVKQHIKNDQLVNM----ASSFSDGNIQIPAQFSRG-RLSLAISTDGASPLLTKRIKEDLSSNYDES-YT 170 (223)
T ss_dssp ECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEET-TEEEEEECTTSCHHHHHHHHHHHHHHSCTH-HH
T ss_pred ECCCCHHHHHHHHHHHhCCCEEEE----eCCcccCeEEEeeEEEeC-CEEEEEECCCCCcHHHHHHHHHHHHHccHH-HH
Confidence 88888777766654 555432 2333222 223333 444445543111222466777777777542 23
Q ss_pred HHHHHHHHHHHHHHH
Q 012194 429 EIRQNAGKWSNFAKE 443 (468)
Q Consensus 429 ~~~~~a~~~~~~~~~ 443 (468)
.+-+.+.++++.+++
T Consensus 171 ~~~~~~~~~R~~vk~ 185 (223)
T 3dfz_A 171 QYTQFLYECRVLIHR 185 (223)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 677777777777775
No 221
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=36.42 E-value=32 Score=31.10 Aligned_cols=35 Identities=9% Similarity=0.173 Sum_probs=24.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
.+.|+|++... .|.+- ..|+++|.++||+|+.+.-
T Consensus 18 ~~~~~vlVTGa--sG~iG--~~l~~~L~~~g~~V~~~~r 52 (330)
T 2pzm_A 18 GSHMRILITGG--AGCLG--SNLIEHWLPQGHEILVIDN 52 (330)
T ss_dssp TTCCEEEEETT--TSHHH--HHHHHHHGGGTCEEEEEEC
T ss_pred CCCCEEEEECC--CCHHH--HHHHHHHHHCCCEEEEEEC
Confidence 44678776643 33332 4678999999999998875
No 222
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=36.19 E-value=34 Score=31.16 Aligned_cols=35 Identities=20% Similarity=0.260 Sum_probs=23.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
++.|+|++... .|-+- ..|+++|.++||+|+.+.-
T Consensus 25 ~~~~~vlVtGa--tG~iG--~~l~~~L~~~g~~V~~~~r 59 (343)
T 2b69_A 25 KDRKRILITGG--AGFVG--SHLTDKLMMDGHEVTVVDN 59 (343)
T ss_dssp --CCEEEEETT--TSHHH--HHHHHHHHHTTCEEEEEEC
T ss_pred cCCCEEEEEcC--ccHHH--HHHHHHHHHCCCEEEEEeC
Confidence 45567776543 33332 4678899999999998874
No 223
>4dim_A Phosphoribosylglycinamide synthetase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ligase; 2.61A {Anaerococcus prevotii}
Probab=36.17 E-value=34 Score=32.13 Aligned_cols=36 Identities=17% Similarity=0.024 Sum_probs=28.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
++.+||+++..+..+ +.+++++++.|++|.++..+.
T Consensus 5 ~~~~~ilI~g~g~~~-----~~~~~a~~~~G~~~v~v~~~~ 40 (403)
T 4dim_A 5 YDNKRLLILGAGRGQ-----LGLYKAAKELGIHTIAGTMPN 40 (403)
T ss_dssp -CCCEEEEECCCGGG-----HHHHHHHHHHTCEEEEEECSS
T ss_pred cCCCEEEEECCcHhH-----HHHHHHHHHCCCEEEEEcCCC
Confidence 566799998877643 668999999999999997543
No 224
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=36.17 E-value=48 Score=25.95 Aligned_cols=43 Identities=12% Similarity=0.169 Sum_probs=33.4
Q ss_pred EEE-EEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccc
Q 012194 15 HCL-VLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLH 57 (468)
Q Consensus 15 ~il-~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 57 (468)
|++ +++.+..-.+++.+.+|...++.|++|+++.+......+.
T Consensus 9 kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv~~l~ 52 (144)
T 2qs7_A 9 KLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGLQAIT 52 (144)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHTB
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHHHHHh
Confidence 444 4555667888899999999999999999988877665544
No 225
>2xj4_A MIPZ; replication, cell division, ATPase, WACA; 1.60A {Caulobacter vibrioides} PDB: 2xj9_A* 2xit_A
Probab=35.97 E-value=37 Score=30.10 Aligned_cols=38 Identities=16% Similarity=0.216 Sum_probs=30.1
Q ss_pred cEEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 14 VHCLVLS--YPAQGHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 14 ~~il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
+|++.++ -|+-|--.-...||..|+++|++|.++=.+.
T Consensus 4 ~kvI~v~s~KGGvGKTT~a~nLA~~La~~G~~VlliD~D~ 43 (286)
T 2xj4_A 4 TRVIVVGNEKGGAGKSTIAVHLVTALLYGGAKVAVIDLDL 43 (286)
T ss_dssp CEEEEECCSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCcEEEEECCC
Confidence 4565544 3566888999999999999999999887655
No 226
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=35.84 E-value=27 Score=31.85 Aligned_cols=39 Identities=15% Similarity=0.060 Sum_probs=22.7
Q ss_pred hhcCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 8 AASCRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 8 ~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
....+.|+|++... .|.+- ..|+++|.++||+|+.+.-.
T Consensus 14 ~~~~~~~~vlVtGa--tG~iG--~~l~~~L~~~G~~V~~~~r~ 52 (347)
T 4id9_A 14 LVPRGSHMILVTGS--AGRVG--RAVVAALRTQGRTVRGFDLR 52 (347)
T ss_dssp -------CEEEETT--TSHHH--HHHHHHHHHTTCCEEEEESS
T ss_pred ccccCCCEEEEECC--CChHH--HHHHHHHHhCCCEEEEEeCC
Confidence 33445677777643 34333 36789999999999988643
No 227
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=35.79 E-value=25 Score=33.06 Aligned_cols=44 Identities=11% Similarity=0.048 Sum_probs=30.5
Q ss_pred hhhcCCCcEEEEEcCCCccCHHHHH----HHHHHHHhCCCeEEEEeCC
Q 012194 7 KAASCRLVHCLVLSYPAQGHINPLL----QFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 7 ~~~~~~~~~il~~~~~~~GH~~p~l----~La~~L~~rGh~Vt~~~~~ 50 (468)
+-..|++|||+++..|-.+--.-.+ +++++|.+.||+|+.+...
T Consensus 16 ~~~~m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~ 63 (386)
T 3e5n_A 16 FQGHMRKIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVLIGID 63 (386)
T ss_dssp -----CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred hhhhcCCceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEEEEEC
Confidence 4456788999988877666555444 7888888899999987754
No 228
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=35.72 E-value=38 Score=27.19 Aligned_cols=40 Identities=13% Similarity=0.169 Sum_probs=29.6
Q ss_pred CCcEEEEEcCCCc---cCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 12 RLVHCLVLSYPAQ---GHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 12 ~~~~il~~~~~~~---GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
.+.+|+++|.-+. ---++...|++.|.++|.+|.|+.+|-
T Consensus 22 ~A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 64 (180)
T 1pno_A 22 NASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 64 (180)
T ss_dssp TCSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred hCCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 3457877764322 123588899999999999999999864
No 229
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=35.70 E-value=20 Score=32.19 Aligned_cols=33 Identities=15% Similarity=0.048 Sum_probs=26.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
+.|||.|+..|..|. .+|+.|+++||+|+++..
T Consensus 6 ~~~~I~iIG~G~mG~-----~~a~~l~~~G~~V~~~dr 38 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGM-----GAARSCLRAGLSTWGADL 38 (303)
T ss_dssp -CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCCeEEEECCCHHHH-----HHHHHHHHCCCeEEEEEC
Confidence 347999997776663 688999999999998854
No 230
>1gsa_A Glutathione synthetase; ligase; HET: ADP GSH; 2.00A {Escherichia coli} SCOP: c.30.1.3 d.142.1.1 PDB: 1gsh_A 2glt_A 1glv_A
Probab=35.64 E-value=30 Score=30.91 Aligned_cols=37 Identities=5% Similarity=0.105 Sum_probs=28.0
Q ss_pred cEEEEEcCCCccC---HHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 14 VHCLVLSYPAQGH---INPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 14 ~~il~~~~~~~GH---~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
|||++++.+.... ......++++|.++||+|.++.+.
T Consensus 2 m~i~il~~~~~~~~~~~~s~~~l~~a~~~~G~~v~~~d~~ 41 (316)
T 1gsa_A 2 IKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMG 41 (316)
T ss_dssp CEEEEECSCGGGCCTTTCHHHHHHHHHHHTTCEEEEECGG
T ss_pred ceEEEEeCcHHhCCcCCChHHHHHHHHHHCCCEEEEEchh
Confidence 6999998774321 233467999999999999998864
No 231
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=35.59 E-value=23 Score=27.21 Aligned_cols=32 Identities=22% Similarity=0.191 Sum_probs=23.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
.+|+++..|..| ..+++.|.+.|++|+++...
T Consensus 7 ~~v~I~G~G~iG-----~~~a~~l~~~g~~v~~~d~~ 38 (144)
T 2hmt_A 7 KQFAVIGLGRFG-----GSIVKELHRMGHEVLAVDIN 38 (144)
T ss_dssp CSEEEECCSHHH-----HHHHHHHHHTTCCCEEEESC
T ss_pred CcEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 468877654334 45789999999999988753
No 232
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=35.51 E-value=1.8e+02 Score=23.72 Aligned_cols=139 Identities=14% Similarity=0.161 Sum_probs=76.9
Q ss_pred ceEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEEeecchHHHhcc-----cCcce
Q 012194 281 SVVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQLEVLAH-----EAAGC 355 (468)
Q Consensus 281 ~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL~~-----~~~~~ 355 (468)
+.|-|-+||.. +....++....++.+|..+-..+-+.+. .|+. ..++... +++
T Consensus 22 ~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaHR--~p~~----------------l~~~~~~a~~~g~~V-- 79 (182)
T 1u11_A 22 PVVGIIMGSQS--DWETMRHADALLTELEIPHETLIVSAHR--TPDR----------------LADYARTAAERGLNV-- 79 (182)
T ss_dssp CSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--CHHH----------------HHHHHHHTTTTTCCE--
T ss_pred CEEEEEECcHH--HHHHHHHHHHHHHHcCCCeEEEEEcccC--CHHH----------------HHHHHHHHHhCCCcE--
Confidence 45777777765 5677888899999998775433322211 1111 0133322 445
Q ss_pred eeecCCcc----hHHHHHHcCCceeecccccc-hhHHHHH--HHh--hhcceeE-ecCCCCCccCHHHHHHHHHHHhcCc
Q 012194 356 FLTHCGWN----STMEALSLGVPMVAMPQWSD-QSTNGKY--IMD--VWKMGLK-VPADEKGIVRREAIAHCISEILEGE 425 (468)
Q Consensus 356 ~I~HgG~~----s~~Eal~~GvP~l~~P~~~D-Q~~na~~--l~~--~~g~G~~-l~~~~~~~~~~~~l~~~i~~ll~~~ 425 (468)
+|.=+|.. ++..++ .-+|+|.+|.... -...... +.+ . |+.+. +..++-+-.++.-+...|. -+.|+
T Consensus 80 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSivqmP~-GvpVatV~I~~a~~~nAallAaqIl-a~~d~ 156 (182)
T 1u11_A 80 IIAGAGGAAHLPGMCAAW-TRLPVLGVPVESRALKGMDSLLSIVQMPG-GVPVGTLAIGASGAKNAALLAASIL-ALYNP 156 (182)
T ss_dssp EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHCCCT-TSCCEECCSSHHHHHHHHHHHHHHH-GGGCH
T ss_pred EEEecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCC-CCceEEEecCCccchHHHHHHHHHH-ccCCH
Confidence 88877754 444444 4799999998542 1122222 233 3 44421 2211000234444444443 24665
Q ss_pred cHHHHHHHHHHHHHHHHHHHHc
Q 012194 426 RGKEIRQNAGKWSNFAKEAVAK 447 (468)
Q Consensus 426 ~~~~~~~~a~~~~~~~~~~~~~ 447 (468)
+++++.+..++..++.+.+
T Consensus 157 ---~l~~kL~~~r~~~~~~v~~ 175 (182)
T 1u11_A 157 ---ALAARLETWRALQTASVPN 175 (182)
T ss_dssp ---HHHHHHHHHHHHHHHHSCS
T ss_pred ---HHHHHHHHHHHHHHHHHHH
Confidence 8999999999988876443
No 233
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=35.46 E-value=26 Score=32.46 Aligned_cols=35 Identities=11% Similarity=0.192 Sum_probs=26.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
++.|||.|+..|..| ..+|+.|.++||+|+++...
T Consensus 20 m~~mkIgiIGlG~mG-----~~~A~~L~~~G~~V~v~dr~ 54 (358)
T 4e21_A 20 FQSMQIGMIGLGRMG-----ADMVRRLRKGGHECVVYDLN 54 (358)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred hcCCEEEEECchHHH-----HHHHHHHHhCCCEEEEEeCC
Confidence 456899999777655 46789999999999988643
No 234
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=35.27 E-value=20 Score=32.44 Aligned_cols=33 Identities=21% Similarity=0.022 Sum_probs=27.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
+|||+++..|+.|- .+|..|. .||+|+++....
T Consensus 2 ~mkI~IiGaGa~G~-----~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 2 SLKIGIIGGGSVGL-----LCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHH-TTSEEEEECSCH
T ss_pred CCEEEEECCCHHHH-----HHHHHHh-cCCceEEEECCH
Confidence 38999998888874 5688898 999999998754
No 235
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=35.26 E-value=30 Score=28.98 Aligned_cols=31 Identities=19% Similarity=0.243 Sum_probs=23.0
Q ss_pred cEEEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 14 VHCLVLS-YPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 14 ~~il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
|||+++. .|..| ..+++.|.++||+|+++..
T Consensus 1 m~i~iiGa~G~~G-----~~ia~~l~~~g~~V~~~~r 32 (212)
T 1jay_A 1 MRVALLGGTGNLG-----KGLALRLATLGHEIVVGSR 32 (212)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHTTTCEEEEEES
T ss_pred CeEEEEcCCCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 6788875 44334 3578899999999998764
No 236
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=35.21 E-value=39 Score=27.23 Aligned_cols=39 Identities=15% Similarity=0.124 Sum_probs=29.1
Q ss_pred CcEEEEEcCCCc--c-CHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 13 LVHCLVLSYPAQ--G-HINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 13 ~~~il~~~~~~~--G-H~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
+.+|+++|.-+. . --++.-.|++.|.++|.+|.|+.+|-
T Consensus 22 A~~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 63 (184)
T 1d4o_A 22 ANSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPV 63 (184)
T ss_dssp CSEEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 457777764322 1 23588899999999999999999864
No 237
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=35.13 E-value=42 Score=28.47 Aligned_cols=34 Identities=21% Similarity=0.285 Sum_probs=25.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
+|+++++.++.| + =.+++++|+++|++|.+..-.
T Consensus 2 ~k~vlITGas~g-I--G~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITGASRG-I--GEAIARALARDGYALALGARS 35 (235)
T ss_dssp CCEEEEESCSSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCcH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 567777776653 2 257899999999999887653
No 238
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=34.85 E-value=21 Score=33.15 Aligned_cols=33 Identities=18% Similarity=0.122 Sum_probs=26.0
Q ss_pred HHHhcccCcceeeecCCcchHHHHHHc----CCceeecc
Q 012194 345 LEVLAHEAAGCFLTHCGWNSTMEALSL----GVPMVAMP 379 (468)
Q Consensus 345 ~~lL~~~~~~~~I~HgG~~s~~Eal~~----GvP~l~~P 379 (468)
.++-..+|+ +|+=||=||++.|... ++|++.+=
T Consensus 103 ~~~~~~~Dl--vI~lGGDGT~L~aa~~~~~~~~PvlGiN 139 (365)
T 3pfn_A 103 DDISNQIDF--IICLGGDGTLLYASSLFQGSVPPVMAFH 139 (365)
T ss_dssp CCCTTTCSE--EEEESSTTHHHHHHHHCSSSCCCEEEEE
T ss_pred hhcccCCCE--EEEEcChHHHHHHHHHhccCCCCEEEEc
Confidence 345567888 9999999999999773 57887653
No 239
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=34.65 E-value=12 Score=36.16 Aligned_cols=34 Identities=18% Similarity=0.208 Sum_probs=28.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
..|||+++..|-.| ..||+.|.+.||+|+++-..
T Consensus 2 ~~M~iiI~G~G~vG-----~~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 2 NAMKIIILGAGQVG-----GTLAENLVGENNDITIVDKD 35 (461)
T ss_dssp CCEEEEEECCSHHH-----HHHHHHTCSTTEEEEEEESC
T ss_pred CcCEEEEECCCHHH-----HHHHHHHHHCCCCEEEEECC
Confidence 46999998887666 36899999999999998754
No 240
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=34.64 E-value=25 Score=31.97 Aligned_cols=35 Identities=17% Similarity=0.165 Sum_probs=26.3
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
++.+||.|+..|..| ..+|..|+++||+|+++...
T Consensus 4 ~~~~kI~vIGaG~MG-----~~iA~~la~~G~~V~l~d~~ 38 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVG-----RSWAMLFASGGFRVKLYDIE 38 (319)
T ss_dssp ---CEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSC
T ss_pred CCCceEEEEeeCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 344689999887777 46788899999999987653
No 241
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=34.64 E-value=38 Score=33.69 Aligned_cols=45 Identities=4% Similarity=-0.065 Sum_probs=38.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcccccc
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSL 56 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 56 (468)
++.+|++.+.++-.|-....-++..|..+|++|.+++.....+.+
T Consensus 97 ~~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~i 141 (579)
T 3bul_A 97 TNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKI 141 (579)
T ss_dssp CSCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHH
T ss_pred CCCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHHH
Confidence 467999999999999999999999999999999998876544433
No 242
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=34.61 E-value=3.4e+02 Score=28.32 Aligned_cols=93 Identities=9% Similarity=0.024 Sum_probs=50.9
Q ss_pred HHHhcccCcceeeecCCcchHHHHHHcC-C--ceee--cccccchhHHHHHHHhhhcceeEecCCCCCccCHHHHHHHHH
Q 012194 345 LEVLAHEAAGCFLTHCGWNSTMEALSLG-V--PMVA--MPQWSDQSTNGKYIMDVWKMGLKVPADEKGIVRREAIAHCIS 419 (468)
Q Consensus 345 ~~lL~~~~~~~~I~HgG~~s~~Eal~~G-v--P~l~--~P~~~DQ~~na~~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~ 419 (468)
..|+.--.-.+++.||-.+.+.|.++-. . |+-+ +|-.++--.-...++.. .++.+.|.+++.
T Consensus 716 ~~l~T~e~h~i~~~gGlgsaV~ell~~r~~~~~l~v~G~~d~G~tgtp~eLl~~~-------------gld~~~Iv~~a~ 782 (845)
T 3ahc_A 716 TELFTADKPVLFAYHSYAQDVRGLIYDRPNHDNFHVVGYKEQGSTTTPFDMVRVN-------------DMDRYALQAAAL 782 (845)
T ss_dssp HHHHCSSSCEEEEESSCHHHHHHHTTTSTTGGGEEEECCCSCCCSCCHHHHHHTT-------------TCSHHHHHHHHH
T ss_pred CcEeecCCcceeeecCcHHHHHHHHHhCCCCceEEEEeccCCCCCCCHHHHHHHh-------------CcCHHHHHHHHH
Confidence 4555432221155777666777777655 2 3433 33322212223333333 689999999999
Q ss_pred HHhcCccHHHHHHHHHHHHHHHHHHHHcCCC
Q 012194 420 EILEGERGKEIRQNAGKWSNFAKEAVAKGGS 450 (468)
Q Consensus 420 ~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~ 450 (468)
+++....+..+++..+....+.++.+.+-|.
T Consensus 783 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 813 (845)
T 3ahc_A 783 KLIDADKYADKIDELNAFRKKAFQFAVDNGY 813 (845)
T ss_dssp HHHHTTTTHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHcchhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9887544445666665555555554444443
No 243
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=34.50 E-value=23 Score=34.64 Aligned_cols=36 Identities=19% Similarity=0.293 Sum_probs=28.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
.++.||+++..|..| +.+|+.|.++|++||++....
T Consensus 40 ~~KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 40 SDKPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp CSSCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCC
Confidence 346799998877555 578899998999999998654
No 244
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=34.37 E-value=30 Score=30.09 Aligned_cols=33 Identities=24% Similarity=0.338 Sum_probs=26.9
Q ss_pred cEEEEEcCCCc--cCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 14 VHCLVLSYPAQ--GHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 14 ~~il~~~~~~~--GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
.+|++++.++. |+- +.+|+.|+++|++|+++..
T Consensus 59 ~~v~VlcG~GNNGGDG---lv~AR~L~~~G~~V~v~~~ 93 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGDG---LVCARHLKLFGYNPVVFYP 93 (246)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCCEEEECC
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCeEEEEEc
Confidence 48999888765 443 7899999999999998754
No 245
>1xfi_A Unknown protein; structural genomics, protein structure initiative, CESG, AT2G17340, center for eukaryotic structural genomics; 1.70A {Arabidopsis thaliana} SCOP: e.50.1.1 PDB: 2q40_A
Probab=34.35 E-value=44 Score=31.06 Aligned_cols=39 Identities=21% Similarity=0.305 Sum_probs=30.5
Q ss_pred CcEEEEEcCCCc-cCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 13 LVHCLVLSYPAQ-GHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 13 ~~~il~~~~~~~-GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
..+|+++.--+. .-+.=++.|++.|.++|++|++++-..
T Consensus 212 ~k~Vl~v~DNAG~Eiv~D~L~La~~Ll~~g~kVvl~vK~~ 251 (367)
T 1xfi_A 212 WKKAVIFVDNSGADIILGILPFARELLRRGAQVVLAANEL 251 (367)
T ss_dssp CCEEEEECCBTTHHHHHTHHHHHHHHHHTTCEEEEEEBSS
T ss_pred CCEEEEEecCCCchhhccHHHHHHHHHHcCCEEEEEECCc
Confidence 468888886655 566666999999999999999887543
No 246
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=34.27 E-value=74 Score=22.66 Aligned_cols=34 Identities=12% Similarity=0.146 Sum_probs=25.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
+..+|++++..+ ......+..|.+.||+|..+..
T Consensus 55 ~~~~ivvyC~~g----~rs~~a~~~L~~~G~~v~~l~G 88 (100)
T 3foj_A 55 DNETYYIICKAG----GRSAQVVQYLEQNGVNAVNVEG 88 (100)
T ss_dssp TTSEEEEECSSS----HHHHHHHHHHHTTTCEEEEETT
T ss_pred CCCcEEEEcCCC----chHHHHHHHHHHCCCCEEEecc
Confidence 346899998554 4567788999999998877654
No 247
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=34.26 E-value=52 Score=27.49 Aligned_cols=36 Identities=11% Similarity=0.178 Sum_probs=30.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
..++++.+|..|+-.-+..+++.|+++|+.|..+-.
T Consensus 32 ~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 32 LPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 457778888888888899999999999999877654
No 248
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=34.18 E-value=1.8e+02 Score=23.38 Aligned_cols=143 Identities=16% Similarity=0.161 Sum_probs=74.6
Q ss_pred ceEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEEeecchHHHhcccCcceeeecC
Q 012194 281 SVVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQLEVLAHEAAGCFLTHC 360 (468)
Q Consensus 281 ~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~I~Hg 360 (468)
+.|-|-+||.. +....++....++.+|..+-+.+-+.+. .|+.. .+|+-.. --..+++ +|.=+
T Consensus 7 ~~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~SaHR--~p~~~----------~~~~~~a-~~~g~~V--iIa~A 69 (169)
T 3trh_A 7 IFVAILMGSDS--DLSTMETAFTELKSLGIPFEAHILSAHR--TPKET----------VEFVENA-DNRGCAV--FIAAA 69 (169)
T ss_dssp CEEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--SHHHH----------HHHHHHH-HHTTEEE--EEEEE
T ss_pred CcEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcccC--CHHHH----------HHHHHHH-HhCCCcE--EEEEC
Confidence 45777777765 5677888899999998875444433211 11110 0111000 0023455 88887
Q ss_pred CcchHHHHHH---cCCceeeccccc-chhHHHHHHHhh-h--cceeE-ecCCCCCccCHHHHHHHHHHHhcCccHHHHHH
Q 012194 361 GWNSTMEALS---LGVPMVAMPQWS-DQSTNGKYIMDV-W--KMGLK-VPADEKGIVRREAIAHCISEILEGERGKEIRQ 432 (468)
Q Consensus 361 G~~s~~Eal~---~GvP~l~~P~~~-DQ~~na~~l~~~-~--g~G~~-l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~ 432 (468)
|...-+-++. .-+|+|.+|... +-......+.-. | |+.+. +..++-+-.++.-+...|.. +.|+ ++++
T Consensus 70 G~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~Il~-~~d~---~l~~ 145 (169)
T 3trh_A 70 GLAAHLAGTIAAHTLKPVIGVPMAGGSLGGLDALLSTVQMPGGVPVACTAIGKAGAKNAAILAAQIIA-LQDK---SIAQ 145 (169)
T ss_dssp CSSCCHHHHHHHTCSSCEEEEECCCSTTTTHHHHHHHHCCCTTSCCEECCSTHHHHHHHHHHHHHHHH-TTCH---HHHH
T ss_pred ChhhhhHHHHHhcCCCCEEEeecCCCCCCCHHHHHHhhcCCCCCceEEEecCCccchHHHHHHHHHHc-CCCH---HHHH
Confidence 7654444433 358999999864 222333333222 0 33211 21110002233334444433 4665 8999
Q ss_pred HHHHHHHHHHHH
Q 012194 433 NAGKWSNFAKEA 444 (468)
Q Consensus 433 ~a~~~~~~~~~~ 444 (468)
+.+..++..++.
T Consensus 146 kl~~~r~~~~~~ 157 (169)
T 3trh_A 146 KLVQQRTAKRET 157 (169)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999988888764
No 249
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=33.99 E-value=22 Score=32.31 Aligned_cols=31 Identities=23% Similarity=0.207 Sum_probs=25.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
|||.|+..|..| ..+|..|.++||+|+++..
T Consensus 1 m~I~iiG~G~mG-----~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 1 MIVSILGAGAMG-----SALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp CEEEEESCCHHH-----HHHHHHHHHHCCEEEEECC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCeEEEEEc
Confidence 689998777666 3568889999999999875
No 250
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=33.98 E-value=79 Score=26.77 Aligned_cols=101 Identities=10% Similarity=0.043 Sum_probs=56.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCcc----ccccccCCCCCCCCeEEEEcCCCCCCCCCCccc
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHK--GLKVTLVTTYFI----SKSLHRDSSSSSASIALEAISDGYDQGGSAQAE 85 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~----~~~~~~~~~~~~~~i~f~~~~~~~~~~~~~~~~ 85 (468)
+++||+++.+|+.+- +.+|.+++.+. +++|..+.+... .+.+++. |+.+..++.. .+.
T Consensus 7 ~~~ri~vl~SG~gsn---l~all~~~~~~~~~~~I~~Vis~~~~a~~l~~A~~~------gIp~~~~~~~----~~~--- 70 (215)
T 3kcq_A 7 KELRVGVLISGRGSN---LEALAKAFSTEESSVVISCVISNNAEARGLLIAQSY------GIPTFVVKRK----PLD--- 70 (215)
T ss_dssp CCEEEEEEESSCCHH---HHHHHHHTCCC-CSEEEEEEEESCTTCTHHHHHHHT------TCCEEECCBT----TBC---
T ss_pred CCCEEEEEEECCcHH---HHHHHHHHHcCCCCcEEEEEEeCCcchHHHHHHHHc------CCCEEEeCcc----cCC---
Confidence 356898877765433 44555666543 378887665321 1233433 7777776521 110
Q ss_pred cHHHHHHHHHHhchHHHHHHHHHhcCCCCCccEEEeCCCc-chHHHHHHHcCCceEEEcccc
Q 012194 86 SIEAYLEKFWQIGPRSLCELVEKMNGSVVPVDCIVYDSFL-PWALDVAKKFGLVGAAFLTQS 146 (468)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~~~-~~~~~~A~~lgiP~i~~~~~~ 146 (468)
+ +.+.+.++++ .+|+||.-.+. .....+-+.....++-+.++.
T Consensus 71 ~-------------~~~~~~L~~~-----~~Dlivlagy~~IL~~~~l~~~~~~~iNiHpSL 114 (215)
T 3kcq_A 71 I-------------EHISTVLREH-----DVDLVCLAGFMSILPEKFVTDWHHKIINIHPSL 114 (215)
T ss_dssp H-------------HHHHHHHHHT-----TCSEEEESSCCSCCCHHHHHHTTTSEEEEESSC
T ss_pred h-------------HHHHHHHHHh-----CCCEEEEeCCceEeCHHHHhhccCCeEEECccc
Confidence 0 2333444443 25999988765 444556666666777766543
No 251
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=33.89 E-value=2.4e+02 Score=25.20 Aligned_cols=106 Identities=8% Similarity=0.121 Sum_probs=60.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCC--ccccccccCCCCCCCCeEEEEcCCCCCCCCCCcccc
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHK--GLKVTLVTTY--FISKSLHRDSSSSSASIALEAISDGYDQGGSAQAES 86 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~--~~~~~~~~~~~~~~~~i~f~~~~~~~~~~~~~~~~~ 86 (468)
.+++||+++.++. || -+.+|..+-.+. +.+|..+.+. +..+.+++. |+.+..+|..... .
T Consensus 103 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~~------gIp~~~~~~~~~~-------r 166 (302)
T 3o1l_A 103 AQKKRVVLMASRE-SH--CLADLLHRWHSDELDCDIACVISNHQDLRSMVEWH------DIPYYHVPVDPKD-------K 166 (302)
T ss_dssp TSCCEEEEEECSC-CH--HHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHTT------TCCEEECCCCSSC-------C
T ss_pred CCCcEEEEEEeCC-ch--hHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHHc------CCCEEEcCCCcCC-------H
Confidence 3468999887665 55 355555555432 5788876653 334444533 8888888742111 0
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhcCCCCCccEEEeCCCc-chHHHHHHHcCCceEEEcccc
Q 012194 87 IEAYLEKFWQIGPRSLCELVEKMNGSVVPVDCIVYDSFL-PWALDVAKKFGLVGAAFLTQS 146 (468)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~~~-~~~~~~A~~lgiP~i~~~~~~ 146 (468)
......+.+.+++.. +|+||.=.+. .....+.+.+.-.++-+.++.
T Consensus 167 ---------~~~~~~~~~~l~~~~-----~DliVlagym~IL~~~~l~~~~~~~INiHpSl 213 (302)
T 3o1l_A 167 ---------EPAFAEVSRLVGHHQ-----ADVVVLARYMQILPPQLCREYAHQVINIHHSF 213 (302)
T ss_dssp ---------HHHHHHHHHHHHHTT-----CSEEEESSCCSCCCTTHHHHTTTCEEEEESSC
T ss_pred ---------HHHHHHHHHHHHHhC-----CCEEEHhHhhhhcCHHHHhhhhCCeEEeCccc
Confidence 001223344445532 5999987765 444556666666777766543
No 252
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=33.86 E-value=38 Score=28.44 Aligned_cols=33 Identities=18% Similarity=0.316 Sum_probs=23.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
|+|++.. +.|.+- ..|+++|.++||+|+.++-.
T Consensus 5 ~~ilItG--atG~iG--~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 5 KKIVLIG--ASGFVG--SALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CEEEEET--CCHHHH--HHHHHHHHTTTCEEEEECSC
T ss_pred CEEEEEc--CCchHH--HHHHHHHHHCCCEEEEEEcC
Confidence 5776653 344443 46789999999999998754
No 253
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=33.79 E-value=32 Score=31.10 Aligned_cols=34 Identities=15% Similarity=0.201 Sum_probs=27.4
Q ss_pred cEEEEEcCCCc--cCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 14 VHCLVLSYPAQ--GHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 14 ~~il~~~~~~~--GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
.+|++++.++. |+- +.+|+.|+.+|++|+++...
T Consensus 133 ~~vlVlcG~GNNGGDG---lv~AR~L~~~G~~V~V~~~~ 168 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQG---ISCGRHLANHDVQVILFLPN 168 (306)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCEEEEECCC
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCcEEEEEec
Confidence 48999888765 443 78999999999999987653
No 254
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=33.72 E-value=27 Score=29.80 Aligned_cols=36 Identities=25% Similarity=0.328 Sum_probs=23.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCC--eEEEEeCC
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGL--KVTLVTTY 50 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh--~Vt~~~~~ 50 (468)
++.|+|++.... |-+- ..++++|.++|| +|+.+.-.
T Consensus 16 m~~~~vlVtGas--g~iG--~~l~~~L~~~G~~~~V~~~~r~ 53 (242)
T 2bka_A 16 MQNKSVFILGAS--GETG--RVLLKEILEQGLFSKVTLIGRR 53 (242)
T ss_dssp HTCCEEEEECTT--SHHH--HHHHHHHHHHTCCSEEEEEESS
T ss_pred hcCCeEEEECCC--cHHH--HHHHHHHHcCCCCCEEEEEEcC
Confidence 344666655432 3222 468899999999 99988643
No 255
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=33.70 E-value=39 Score=30.59 Aligned_cols=33 Identities=24% Similarity=0.169 Sum_probs=22.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
.|+|++.... |-+- ..|+++|.++||+|+.+.-
T Consensus 5 ~~~vlVTGat--G~iG--~~l~~~L~~~G~~V~~~~r 37 (341)
T 3enk_A 5 KGTILVTGGA--GYIG--SHTAVELLAHGYDVVIADN 37 (341)
T ss_dssp SCEEEEETTT--SHHH--HHHHHHHHHTTCEEEEECC
T ss_pred CcEEEEecCC--cHHH--HHHHHHHHHCCCcEEEEec
Confidence 4566655433 3332 4788999999999998764
No 256
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=33.54 E-value=54 Score=29.74 Aligned_cols=41 Identities=12% Similarity=0.031 Sum_probs=32.7
Q ss_pred CCCc-EEEEEc-CCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 11 CRLV-HCLVLS-YPAQGHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 11 ~~~~-~il~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
.+.| +|+|++ -|+-|-..-..+||..|+++|++|.++..+.
T Consensus 10 ~~gm~~i~v~sgKGGvGKTTvA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 10 NKGKTTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp BTTBCEEEEEEESTTSSHHHHHHHHHHHHHHTTCCEEEEECCS
T ss_pred CCCCeEEEEEeCCCCchHHHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3453 555544 4566999999999999999999999999876
No 257
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=33.34 E-value=45 Score=28.54 Aligned_cols=30 Identities=13% Similarity=0.205 Sum_probs=25.5
Q ss_pred ccCcceeeecCCcchHHHHHHcCCceeeccccc
Q 012194 350 HEAAGCFLTHCGWNSTMEALSLGVPMVAMPQWS 382 (468)
Q Consensus 350 ~~~~~~~I~HgG~~s~~Eal~~GvP~l~~P~~~ 382 (468)
.+++ +|+.||.......- .++|+|-++...
T Consensus 63 ~~dV--IISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 63 RCDA--IIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CCSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCeE--EEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 3677 99999999999975 689999999764
No 258
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=33.32 E-value=43 Score=27.56 Aligned_cols=33 Identities=18% Similarity=0.296 Sum_probs=21.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
++|||++... .|-+- ..++++|. +||+|+.+.-
T Consensus 2 ~kM~vlVtGa--sg~iG--~~~~~~l~-~g~~V~~~~r 34 (202)
T 3d7l_A 2 NAMKILLIGA--SGTLG--SAVKERLE-KKAEVITAGR 34 (202)
T ss_dssp CSCEEEEETT--TSHHH--HHHHHHHT-TTSEEEEEES
T ss_pred CCcEEEEEcC--CcHHH--HHHHHHHH-CCCeEEEEec
Confidence 3578655433 33333 56789999 9999998753
No 259
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=33.04 E-value=33 Score=30.11 Aligned_cols=34 Identities=15% Similarity=0.201 Sum_probs=27.3
Q ss_pred cEEEEEcCCCc--cCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 14 VHCLVLSYPAQ--GHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 14 ~~il~~~~~~~--GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
.+|++++.++. |+- +.+|+.|+++|++|+++...
T Consensus 86 ~~vlVlcG~GNNGGDG---lv~AR~L~~~G~~V~v~~~~ 121 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQG---ISCGRHLANHDVQVILFLPN 121 (259)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCEEEEECCB
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCeEEEEEec
Confidence 48999888765 443 78999999999999987653
No 260
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=33.01 E-value=47 Score=29.72 Aligned_cols=39 Identities=10% Similarity=0.026 Sum_probs=30.4
Q ss_pred CCcEE-EEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 12 RLVHC-LVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 12 ~~~~i-l~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
++++| .|..-|+-|=-.-...||..|+++|++|.++=.+
T Consensus 39 ~~~~vI~v~~KGGvGKTT~a~nLA~~La~~G~~VlliD~D 78 (307)
T 3end_A 39 TGAKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCD 78 (307)
T ss_dssp -CCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred CCceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 34555 4555556688899999999999999999998655
No 261
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=32.98 E-value=36 Score=28.85 Aligned_cols=34 Identities=21% Similarity=0.266 Sum_probs=23.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
||+++++.++.| + =.+++++|+++|++|.++.-.
T Consensus 1 Mk~vlVTGas~g-I--G~~~a~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITGASSG-L--GAELAKLYDAEGKATYLTGRS 34 (230)
T ss_dssp --CEEEESTTSH-H--HHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEecCCch-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 566777776643 2 257899999999999888653
No 262
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=32.88 E-value=35 Score=29.50 Aligned_cols=36 Identities=25% Similarity=0.161 Sum_probs=26.6
Q ss_pred cCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 10 SCRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
....+||.|+..|..| ..+|+.|+++||+|++....
T Consensus 16 ~~~~~kIgiIG~G~mG-----~alA~~L~~~G~~V~~~~r~ 51 (245)
T 3dtt_A 16 YFQGMKIAVLGTGTVG-----RTMAGALADLGHEVTIGTRD 51 (245)
T ss_dssp ---CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCeEEEECCCHHH-----HHHHHHHHHCCCEEEEEeCC
Confidence 3456899999777655 45789999999999988643
No 263
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=32.75 E-value=34 Score=30.61 Aligned_cols=32 Identities=13% Similarity=0.184 Sum_probs=26.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
.|||.|+..|..|. .+|+.|.++||+|+++..
T Consensus 3 m~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~d~ 34 (302)
T 2h78_A 3 MKQIAFIGLGHMGA-----PMATNLLKAGYLLNVFDL 34 (302)
T ss_dssp CCEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCEEEEEeecHHHH-----HHHHHHHhCCCeEEEEcC
Confidence 37999998877774 678899999999998854
No 264
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=32.67 E-value=29 Score=29.85 Aligned_cols=34 Identities=18% Similarity=0.200 Sum_probs=24.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
-|+++++.++. -+- .+++++|+++|++|.++.-.
T Consensus 14 ~k~vlITGas~-gIG--~~ia~~l~~~G~~V~~~~r~ 47 (247)
T 3i1j_A 14 GRVILVTGAAR-GIG--AAAARAYAAHGASVVLLGRT 47 (247)
T ss_dssp TCEEEESSTTS-HHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEeCCCC-hHH--HHHHHHHHHCCCEEEEEecC
Confidence 35666666654 222 47899999999999887653
No 265
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=32.65 E-value=37 Score=30.11 Aligned_cols=31 Identities=23% Similarity=0.201 Sum_probs=25.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
|||.|+..|..| ..+|+.|.++||+|+++..
T Consensus 2 ~~i~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 32 (287)
T 3pef_A 2 QKFGFIGLGIMG-----SAMAKNLVKAGCSVTIWNR 32 (287)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEeecHHH-----HHHHHHHHHCCCeEEEEcC
Confidence 789999777665 4678999999999997754
No 266
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=32.51 E-value=45 Score=29.25 Aligned_cols=32 Identities=9% Similarity=0.021 Sum_probs=25.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 15 HCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 15 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
|+++++.++.| + =.++|++|+++|++|.+..-
T Consensus 12 K~alVTGas~G-I--G~aia~~la~~Ga~V~~~~r 43 (261)
T 4h15_A 12 KRALITAGTKG-A--GAATVSLFLELGAQVLTTAR 43 (261)
T ss_dssp CEEEESCCSSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeccCcH-H--HHHHHHHHHHcCCEEEEEEC
Confidence 78888988775 1 26789999999999987653
No 267
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=32.47 E-value=66 Score=32.06 Aligned_cols=27 Identities=22% Similarity=0.277 Sum_probs=22.7
Q ss_pred ccCcceeeecCC------cchHHHHHHcCCceeec
Q 012194 350 HEAAGCFLTHCG------WNSTMEALSLGVPMVAM 378 (468)
Q Consensus 350 ~~~~~~~I~HgG------~~s~~Eal~~GvP~l~~ 378 (468)
++.+ +++|.| .+.+.||-+.++|+|++
T Consensus 68 k~~v--~~~tsGpG~~N~~~gl~~A~~~~vPll~I 100 (590)
T 1v5e_A 68 NLGV--TVGSGGPGASHLINGLYDAAMDNIPVVAI 100 (590)
T ss_dssp CCCE--EEECTTHHHHTTHHHHHHHHHHTCCEEEE
T ss_pred CCEE--EEeCcChHHHHHHHHHHHHHhcCCCEEEE
Confidence 3555 999998 56889999999999986
No 268
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=32.41 E-value=45 Score=28.51 Aligned_cols=41 Identities=12% Similarity=0.234 Sum_probs=33.4
Q ss_pred hHHHHHHHHHhcCCCCCccEEEeCCCcchHHHHHHHcCCceEEEcc
Q 012194 99 PRSLCELVEKMNGSVVPVDCIVYDSFLPWALDVAKKFGLVGAAFLT 144 (468)
Q Consensus 99 ~~~~~~~l~~l~~~~~p~DlVI~D~~~~~~~~~A~~lgiP~i~~~~ 144 (468)
...+...++++.+. .+|+||.| ..+..+|+++|+|.+.+.+
T Consensus 140 ~ee~~~~i~~l~~~--G~~vVVG~---~~~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 140 EEDARGQINELKAN--GTEAVVGA---GLITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHHHT--TCCEEEES---HHHHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHHHC--CCCEEECC---HHHHHHHHHcCCcEEEECC
Confidence 45778888888875 48999998 4468899999999999874
No 269
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=32.40 E-value=17 Score=32.87 Aligned_cols=32 Identities=19% Similarity=0.348 Sum_probs=26.2
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhC-----C-CeEEEEeC
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHK-----G-LKVTLVTT 49 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~r-----G-h~Vt~~~~ 49 (468)
+|||+|+..|..|. .+|..|.+. | |+|+++..
T Consensus 8 ~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEc
Confidence 37999998887774 568888888 9 99999876
No 270
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=32.31 E-value=52 Score=28.36 Aligned_cols=33 Identities=21% Similarity=0.265 Sum_probs=22.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 15 HCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 15 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
|.++++.++.| +- .+++++|.++|++|.++.-.
T Consensus 14 k~vlItGasgg-iG--~~la~~l~~~G~~V~~~~r~ 46 (260)
T 3awd_A 14 RVAIVTGGAQN-IG--LACVTALAEAGARVIIADLD 46 (260)
T ss_dssp CEEEEETTTSH-HH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCch-HH--HHHHHHHHHCCCEEEEEeCC
Confidence 44555544432 22 57899999999999988754
No 271
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=32.26 E-value=50 Score=30.18 Aligned_cols=81 Identities=9% Similarity=-0.058 Sum_probs=47.7
Q ss_pred eEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEEeecchHHHhcccCcceeeecCC
Q 012194 282 VVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQLEVLAHEAAGCFLTHCG 361 (468)
Q Consensus 282 ~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~I~HgG 361 (468)
.|+++-.+...........+...|++.+..+.+..... +.... .. -.......+++ +|.=||
T Consensus 28 ~vI~NP~sg~~~~~~~~~~i~~~L~~~g~~~~~~~t~~-----~~~a~----------~~-~~~~~~~~~d~--vvv~GG 89 (337)
T 2qv7_A 28 RIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEK-----IGDAT----------LE-AERAMHENYDV--LIAAGG 89 (337)
T ss_dssp EEEECTTSTTSCHHHHHHHHHHHHHHTTEEEEEEECCS-----TTHHH----------HH-HHHHTTTTCSE--EEEEEC
T ss_pred EEEECCCCCCCchHHHHHHHHHHHHHcCCeEEEEEecC-----cchHH----------HH-HHHHhhcCCCE--EEEEcC
Confidence 45555444332234566778888888887655433211 01100 00 11122234567 999999
Q ss_pred cchHHHHHH------cCCceeeccc
Q 012194 362 WNSTMEALS------LGVPMVAMPQ 380 (468)
Q Consensus 362 ~~s~~Eal~------~GvP~l~~P~ 380 (468)
=||+.|++. .++|+.++|.
T Consensus 90 DGTv~~v~~~l~~~~~~~pl~iIP~ 114 (337)
T 2qv7_A 90 DGTLNEVVNGIAEKPNRPKLGVIPM 114 (337)
T ss_dssp HHHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred chHHHHHHHHHHhCCCCCcEEEecC
Confidence 999999863 4689999996
No 272
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=32.26 E-value=44 Score=30.00 Aligned_cols=30 Identities=13% Similarity=0.180 Sum_probs=26.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVT 48 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 48 (468)
.||.|+-.|..|. ++|+.|.++||+|+++-
T Consensus 4 ~kIgfIGlG~MG~-----~mA~~L~~~G~~v~v~d 33 (300)
T 3obb_A 4 KQIAFIGLGHMGA-----PMATNLLKAGYLLNVFD 33 (300)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEEC
T ss_pred CEEEEeeehHHHH-----HHHHHHHhCCCeEEEEc
Confidence 3899999998884 68999999999999874
No 273
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=32.26 E-value=45 Score=27.43 Aligned_cols=39 Identities=13% Similarity=0.170 Sum_probs=28.9
Q ss_pred CcEEEEEcCCCc---cCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 13 LVHCLVLSYPAQ---GHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 13 ~~~il~~~~~~~---GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
..+|+++|.-+. ---++.-.|++.|.++|.+|.|..+|-
T Consensus 46 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 87 (203)
T 2fsv_C 46 ASKVIIVPGYGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 87 (203)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCcEEEEcCchHhHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 357777764322 123578899999999999999999864
No 274
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=31.96 E-value=1.7e+02 Score=22.27 Aligned_cols=48 Identities=8% Similarity=0.017 Sum_probs=32.9
Q ss_pred cCCceeecccccchhHHHHHHHhhhcceeEecCCCCCccCHHHHHHHHHHHhcC
Q 012194 371 LGVPMVAMPQWSDQSTNGKYIMDVWKMGLKVPADEKGIVRREAIAHCISEILEG 424 (468)
Q Consensus 371 ~GvP~l~~P~~~DQ~~na~~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~ 424 (468)
..+|+|++--..+ ........+. |+--.+.+ .++.++|...|+.++..
T Consensus 74 ~~~pii~ls~~~~-~~~~~~~~~~-g~~~~l~k----P~~~~~L~~~i~~~~~~ 121 (155)
T 1qkk_A 74 PDLPMILVTGHGD-IPMAVQAIQD-GAYDFIAK----PFAADRLVQSARRAEEK 121 (155)
T ss_dssp TTSCEEEEECGGG-HHHHHHHHHT-TCCEEEES----SCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCC-hHHHHHHHhc-CCCeEEeC----CCCHHHHHHHHHHHHHH
Confidence 4788888754443 4445555566 76444443 56999999999999865
No 275
>1mio_A Nitrogenase molybdenum iron protein (alpha chain); HET: HCA CFM CLP; 3.00A {Clostridium pasteurianum} SCOP: c.92.2.3
Probab=31.95 E-value=1.7e+02 Score=28.62 Aligned_cols=36 Identities=8% Similarity=0.004 Sum_probs=25.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFI 52 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 52 (468)
...|++++..+. + .+.+++.|.+.|-+|..+++...
T Consensus 334 ~GKrv~i~~~~~--~---~~~l~~~l~ElGm~vv~~~t~~~ 369 (533)
T 1mio_A 334 QGKTACLYVGGS--R---SHTYMNMLKSFGVDSLVAGFEFA 369 (533)
T ss_dssp TTCEEEEEESSS--H---HHHHHHHHHHHTCEEEEEEESSC
T ss_pred CCCEEEEECCch--H---HHHHHHHHHHCCCEEEEEEeccC
Confidence 456888876553 2 55667777788999999876543
No 276
>3tl4_X Glutaminyl-tRNA synthetase; glutamine, appended domain, hinge, tRNA LIG amidotransferase, ligase; 2.30A {Saccharomyces cerevisiae}
Probab=31.89 E-value=46 Score=27.48 Aligned_cols=74 Identities=15% Similarity=0.143 Sum_probs=44.5
Q ss_pred chhHHHHHHHhhhcceeEecCCCCCccCHHHHHHHHHHHhcCcc--H--HHHHHHHHHHHHHHHH----HHHcCCCcHHH
Q 012194 383 DQSTNGKYIMDVWKMGLKVPADEKGIVRREAIAHCISEILEGER--G--KEIRQNAGKWSNFAKE----AVAKGGSSDKN 454 (468)
Q Consensus 383 DQ~~na~~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~~~--~--~~~~~~a~~~~~~~~~----~~~~~g~~~~~ 454 (468)
+..+.+..-++- |+|+.+ |+|+|.++|.+.++... . +.|+ |.-.+-..+++ -++++...-..
T Consensus 100 ~~id~~~Fe~~c-GVGV~V--------T~EqI~~~V~~~i~~~k~~i~~~RY~-~~g~ll~~vr~~p~LkWAd~~~vK~~ 169 (187)
T 3tl4_X 100 EASTKMGMNENS-GVGIEI--------TEDQVRNYVMQYIQENKERILTERYK-LVPGIFADVKNLKELKWADPRSFKPI 169 (187)
T ss_dssp GGCCHHHHHHTT-TTTCCC--------CHHHHHHHHHHHHHHTHHHHHHHGGG-GHHHHHHHHHTCGGGTTSCTTSHHHH
T ss_pred CCCCHHHHHHHC-CCCeEe--------CHHHHHHHHHHHHHHhHHHHHHhccc-cHHHHHHHHhcccCCCCCCHHHHHHH
Confidence 334444444555 999766 78899999999995421 0 2344 44444444443 14455555666
Q ss_pred HHHHHHHHHhcC
Q 012194 455 IDDFVANLISSK 466 (468)
Q Consensus 455 ~~~~~~~l~~~~ 466 (468)
+++-+-.|..+|
T Consensus 170 vD~~~l~lLGPK 181 (187)
T 3tl4_X 170 IDQEVLKLLGPK 181 (187)
T ss_dssp HHHHHHHHHCSC
T ss_pred HHHHHHHHcCCc
Confidence 777777766654
No 277
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=31.68 E-value=47 Score=27.44 Aligned_cols=39 Identities=15% Similarity=0.106 Sum_probs=28.9
Q ss_pred CcEEEEEcCCCc---cCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 13 LVHCLVLSYPAQ---GHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 13 ~~~il~~~~~~~---GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
+.+|+++|.-+. =--++.-.|++.|.++|.+|.|+.+|-
T Consensus 45 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 86 (207)
T 1djl_A 45 ANSIIITPGYGLCAAKAQYPIADLVKMLTEQGKKVRFGIHPV 86 (207)
T ss_dssp CSEEEEEECHHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CCeEEEECCchHHHHHHhHHHHHHHHHHHHCCCeEEEEeCcc
Confidence 357777764322 123578899999999999999999864
No 278
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=31.65 E-value=32 Score=31.94 Aligned_cols=40 Identities=10% Similarity=0.056 Sum_probs=30.1
Q ss_pred CCCcEEEEEcCCCccCHHHHH----HHHHHHHhCCCeEEEEeCC
Q 012194 11 CRLVHCLVLSYPAQGHINPLL----QFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l----~La~~L~~rGh~Vt~~~~~ 50 (468)
|++|||+++..|-.+--.-.+ +++++|.+.||+|+.+...
T Consensus 1 m~~~~v~vl~GG~S~E~evSl~S~~~v~~al~~~~~~v~~i~i~ 44 (364)
T 3i12_A 1 MAKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVLLGID 44 (364)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred CCccEEEEEeccCCCCccchHHHHHHHHHHHhhcCCeEEEEEEC
Confidence 356899988887666655444 7888888899999987753
No 279
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=31.48 E-value=48 Score=32.12 Aligned_cols=36 Identities=17% Similarity=-0.004 Sum_probs=30.0
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC-CC-eEEEEeCCc
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHK-GL-KVTLVTTYF 51 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r-Gh-~Vt~~~~~~ 51 (468)
++.|||.|+..|..| +.+|..|+++ || +|+++-...
T Consensus 16 ~~~mkIaVIGlG~mG-----~~lA~~la~~~G~~~V~~~D~~~ 53 (478)
T 3g79_A 16 GPIKKIGVLGMGYVG-----IPAAVLFADAPCFEKVLGFQRNS 53 (478)
T ss_dssp CSCCEEEEECCSTTH-----HHHHHHHHHSTTCCEEEEECCCC
T ss_pred CCCCEEEEECcCHHH-----HHHHHHHHHhCCCCeEEEEECCh
Confidence 456899999888888 5789999999 99 999887543
No 280
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=31.48 E-value=47 Score=28.82 Aligned_cols=35 Identities=23% Similarity=0.295 Sum_probs=26.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
.||.++++.++.| + =.+++++|+++|++|.++...
T Consensus 6 ~~k~vlVTGas~g-I--G~~~a~~l~~~G~~v~~~~~~ 40 (264)
T 3i4f_A 6 FVRHALITAGTKG-L--GKQVTEKLLAKGYSVTVTYHS 40 (264)
T ss_dssp CCCEEEETTTTSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred ccCEEEEeCCCch-h--HHHHHHHHHHCCCEEEEEcCC
Confidence 3577788776652 2 258899999999999987544
No 281
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=31.43 E-value=34 Score=31.96 Aligned_cols=35 Identities=14% Similarity=0.160 Sum_probs=27.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
+.|+|+++..|.. =+..|..|+++||+|+++-...
T Consensus 2 ~~~~v~iiG~G~~-----Gl~~A~~l~~~g~~v~v~E~~~ 36 (384)
T 2bi7_A 2 KSKKILIVGAGFS-----GAVIGRQLAEKGHQVHIIDQRD 36 (384)
T ss_dssp CCCEEEEECCSHH-----HHHHHHHHHTTTCEEEEEESSS
T ss_pred CcCCEEEECcCHH-----HHHHHHHHHHCCCcEEEEEecC
Confidence 3478988877643 3678899999999999997643
No 282
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=31.38 E-value=80 Score=31.28 Aligned_cols=28 Identities=29% Similarity=0.294 Sum_probs=23.3
Q ss_pred cccCcceeeecCCc------chHHHHHHcCCceeec
Q 012194 349 AHEAAGCFLTHCGW------NSTMEALSLGVPMVAM 378 (468)
Q Consensus 349 ~~~~~~~~I~HgG~------~s~~Eal~~GvP~l~~ 378 (468)
.++.+ +++|.|- +.+.||-+.++|+|++
T Consensus 72 g~p~v--~~~TsGpG~~N~~~~l~~A~~~~vPll~i 105 (566)
T 1ozh_A 72 GKAGV--ALVTSGPGCSNLITGMATANSEGDPVVAL 105 (566)
T ss_dssp SSCEE--EEECSTHHHHTTHHHHHHHHHHTCCEEEE
T ss_pred CCCEE--EEEccChHHHHHHHHHHHHHhcCCCEEEE
Confidence 34556 9999996 6888999999999986
No 283
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=31.33 E-value=44 Score=32.65 Aligned_cols=34 Identities=9% Similarity=0.112 Sum_probs=24.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
.|||++....++ +- ..|++.|.++||+|+.++-.
T Consensus 147 ~m~VLVTGatG~--IG--~~l~~~L~~~G~~V~~l~R~ 180 (516)
T 3oh8_A 147 PLTVAITGSRGL--VG--RALTAQLQTGGHEVIQLVRK 180 (516)
T ss_dssp CCEEEEESTTSH--HH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCCH--HH--HHHHHHHHHCCCEEEEEECC
Confidence 688877654433 33 36789999999999998754
No 284
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=31.25 E-value=34 Score=30.63 Aligned_cols=41 Identities=12% Similarity=0.010 Sum_probs=30.1
Q ss_pred CCcEEEEEcCCCccC----HHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012194 12 RLVHCLVLSYPAQGH----INPLLQFAKRLDHKGLKVTLVTTYFI 52 (468)
Q Consensus 12 ~~~~il~~~~~~~GH----~~p~l~La~~L~~rGh~Vt~~~~~~~ 52 (468)
.+|||+++..|...- +.-..+++++|.++||+|..+.....
T Consensus 2 ~~m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~i~~~~~ 46 (307)
T 3r5x_A 2 NAMRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPITLNEK 46 (307)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEEEECSSG
T ss_pred CCcEEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEEEcccCc
Confidence 468999888664322 34456888999999999998887543
No 285
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=31.10 E-value=31 Score=33.43 Aligned_cols=45 Identities=22% Similarity=0.234 Sum_probs=26.0
Q ss_pred CchhhhhhhcCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 1 MENIEKKAASCRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 1 ~~~~~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
|.+|.......+..+|+++..|-.| +..|..|+++|++|+++-..
T Consensus 1 m~~~~~~~~~~~~~~v~iiG~G~~G-----l~aA~~l~~~g~~v~v~E~~ 45 (504)
T 1sez_A 1 MAPSAGEDKHSSAKRVAVIGAGVSG-----LAAAYKLKIHGLNVTVFEAE 45 (504)
T ss_dssp ------------CCEEEEECCSHHH-----HHHHHHHHTTSCEEEEECSS
T ss_pred CCCCCCCCccCCCCeEEEECCCHHH-----HHHHHHHHHCCCcEEEEEeC
Confidence 4444333222335688888777444 67789999999999998654
No 286
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=31.10 E-value=40 Score=29.68 Aligned_cols=34 Identities=26% Similarity=0.284 Sum_probs=27.4
Q ss_pred cEEEEEcCCCc--cCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 14 VHCLVLSYPAQ--GHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 14 ~~il~~~~~~~--GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
.+|++++.++. |+- +.+|+.|+++|++|+++...
T Consensus 80 ~~VlVlcG~GNNGGDG---lv~AR~L~~~G~~V~V~~~~ 115 (265)
T 2o8n_A 80 PTVLVICGPGNNGGDG---LVCARHLKLFGYQPTIYYPK 115 (265)
T ss_dssp CEEEEEECSSHHHHHH---HHHHHHHHHTTCEEEEECCS
T ss_pred CeEEEEECCCCCHHHH---HHHHHHHHHCCCcEEEEEeC
Confidence 48999888765 454 78999999999999987653
No 287
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=31.01 E-value=47 Score=28.98 Aligned_cols=33 Identities=15% Similarity=0.228 Sum_probs=24.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 15 HCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 15 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
|+++++.++.| + =.+++++|+++|++|.++.-.
T Consensus 21 k~vlVTGas~g-I--G~aia~~l~~~G~~V~~~~r~ 53 (266)
T 4egf_A 21 KRALITGATKG-I--GADIARAFAAAGARLVLSGRD 53 (266)
T ss_dssp CEEEETTTTSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCcH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 67777777654 2 247899999999999887653
No 288
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=30.79 E-value=57 Score=27.92 Aligned_cols=21 Identities=29% Similarity=0.365 Sum_probs=17.9
Q ss_pred HHHHHHHHhCCCeEEEEeCCc
Q 012194 31 LQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 31 l~La~~L~~rGh~Vt~~~~~~ 51 (468)
.++|++|.++|++|+++..+.
T Consensus 38 ~aiA~~~~~~Ga~V~l~~~~~ 58 (226)
T 1u7z_A 38 FAIAAAAARRGANVTLVSGPV 58 (226)
T ss_dssp HHHHHHHHHTTCEEEEEECSC
T ss_pred HHHHHHHHHCCCEEEEEECCc
Confidence 578999999999999987654
No 289
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=30.73 E-value=45 Score=31.83 Aligned_cols=31 Identities=19% Similarity=0.169 Sum_probs=24.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
|||.++..|..| ..+|..|+++||+|+++..
T Consensus 1 mkI~VIG~G~vG-----~~~A~~la~~G~~V~~~d~ 31 (436)
T 1mv8_A 1 MRISIFGLGYVG-----AVCAGCLSARGHEVIGVDV 31 (436)
T ss_dssp CEEEEECCSTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEECCCHHH-----HHHHHHHHHCCCEEEEEEC
Confidence 689888766666 4678889999999998864
No 290
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=30.67 E-value=51 Score=29.68 Aligned_cols=36 Identities=19% Similarity=0.135 Sum_probs=24.5
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
.+.|+|++... .|.+- ..|++.|.++||+|+.+.-.
T Consensus 9 ~~~~~vlVTGa--tG~iG--~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 9 PEGSLVLVTGA--NGFVA--SHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp CTTCEEEEETT--TSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEECC--ccHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 34567766543 34333 46789999999999988753
No 291
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=30.63 E-value=33 Score=29.00 Aligned_cols=33 Identities=21% Similarity=0.176 Sum_probs=23.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
..|||+|+..|..| ..+++.|.+.||+|+++..
T Consensus 27 ~~~~I~iiG~G~~G-----~~la~~l~~~g~~V~~~~r 59 (215)
T 2vns_A 27 EAPKVGILGSGDFA-----RSLATRLVGSGFKVVVGSR 59 (215)
T ss_dssp --CCEEEECCSHHH-----HHHHHHHHHTTCCEEEEES
T ss_pred CCCEEEEEccCHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 35789998655444 3568889999999988764
No 292
>2fb6_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.46A {Bacteroides thetaiotaomicron}
Probab=30.58 E-value=47 Score=24.99 Aligned_cols=42 Identities=14% Similarity=0.100 Sum_probs=29.6
Q ss_pred CcEEEEEcCCCc-cCH-HHHHHHHHHHHhCC--CeEEEEeCCcccc
Q 012194 13 LVHCLVLSYPAQ-GHI-NPLLQFAKRLDHKG--LKVTLVTTYFISK 54 (468)
Q Consensus 13 ~~~il~~~~~~~-GH~-~p~l~La~~L~~rG--h~Vt~~~~~~~~~ 54 (468)
.||++|+-..+. -.. +..+..|....++| |+|.++.-.....
T Consensus 7 ~~K~~ivi~s~d~~~~~~~al~~A~~a~~~G~~~eV~i~~~G~~v~ 52 (117)
T 2fb6_A 7 NDKLTILWTTDNKDTVFNMLAMYALNSKNRGWWKHINIILWGASVK 52 (117)
T ss_dssp TSEEEEEECCCCHHHHHHTHHHHHHHHHHHTSCSEEEEEECSHHHH
T ss_pred CCeEEEEEEcCChHHHHHHHHHHHHHHHHcCCCCcEEEEEECCeee
Confidence 378887655543 222 34678899999999 8999988766555
No 293
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=30.48 E-value=70 Score=24.73 Aligned_cols=39 Identities=15% Similarity=0.238 Sum_probs=27.4
Q ss_pred cEEEEEcCCCccCHHHHH-HHHHHHHhCCCeEEEEeCCcc
Q 012194 14 VHCLVLSYPAQGHINPLL-QFAKRLDHKGLKVTLVTTYFI 52 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l-~La~~L~~rGh~Vt~~~~~~~ 52 (468)
|||+++-...+|+..-+. .|++.|.++|++|.++.....
T Consensus 2 ~ki~I~y~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~ 41 (148)
T 3f6r_A 2 SKVLIVFGSSTGNTESIAQKLEELIAAGGHEVTLLNAADA 41 (148)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHTTTCEEEEEETTTB
T ss_pred CeEEEEEECCCchHHHHHHHHHHHHHhCCCeEEEEehhhC
Confidence 477766555678776544 567788888999998876543
No 294
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=30.41 E-value=70 Score=22.94 Aligned_cols=39 Identities=8% Similarity=0.009 Sum_probs=27.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccc
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKS 55 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~ 55 (468)
+...|++++..+ ......+..|.+.||+|.++.. .+...
T Consensus 55 ~~~~iv~yC~~g----~rs~~a~~~L~~~G~~v~~l~G-G~~~W 93 (103)
T 3eme_A 55 KNEIYYIVCAGG----VRSAKVVEYLEANGIDAVNVEG-GMHAW 93 (103)
T ss_dssp TTSEEEEECSSS----SHHHHHHHHHHTTTCEEEEETT-HHHHH
T ss_pred CCCeEEEECCCC----hHHHHHHHHHHHCCCCeEEeCC-CHHHH
Confidence 345788998654 2456778899999998887654 34433
No 295
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=30.35 E-value=68 Score=26.58 Aligned_cols=36 Identities=11% Similarity=0.043 Sum_probs=29.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
..++++.+|..|.-.-+..+++.|.++|+.|..+-.
T Consensus 28 ~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~ 63 (236)
T 1zi8_A 28 APVIVIAQDIFGVNAFMRETVSWLVDQGYAAVCPDL 63 (236)
T ss_dssp EEEEEEECCTTBSCHHHHHHHHHHHHTTCEEEEECG
T ss_pred CCEEEEEcCCCCCCHHHHHHHHHHHhCCcEEEeccc
Confidence 456777778778888889999999999999877654
No 296
>1rw7_A YDR533CP; alpha-beta sandwich, DJ-1/THIJ/PFPI superfamily, unknown function; 1.80A {Saccharomyces cerevisiae} SCOP: c.23.16.2 PDB: 1qvv_A* 1qvz_A 1qvw_A
Probab=30.27 E-value=92 Score=26.75 Aligned_cols=38 Identities=13% Similarity=0.092 Sum_probs=27.3
Q ss_pred cEEEEEcCCCc-----------cCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 14 VHCLVLSYPAQ-----------GHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 14 ~~il~~~~~~~-----------GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
+||+++..... -...=+....+.|.+.|++|+++++..
T Consensus 4 ~kvLivls~~~~~~~~~~~~~G~~~~E~~~p~~vl~~ag~~v~~~s~~g 52 (243)
T 1rw7_A 4 KKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETG 52 (243)
T ss_dssp CEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred ceEEEEECCCCcccCCCCCCCccCHHHHHHHHHHHHHCCCEEEEECCCC
Confidence 48887765421 134566777788889999999999754
No 297
>3l3b_A ES1 family protein; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography, isopr biosynthesis; 1.90A {Ehrlichia chaffeensis}
Probab=30.23 E-value=92 Score=26.87 Aligned_cols=38 Identities=11% Similarity=0.088 Sum_probs=26.3
Q ss_pred cEEEEEcC-----CCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012194 14 VHCLVLSY-----PAQGHINPLLQFAKRLDHKGLKVTLVTTYFI 52 (468)
Q Consensus 14 ~~il~~~~-----~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 52 (468)
+||+|+-. .+ --..=+......|.+.|++|+++++...
T Consensus 24 kkV~ill~~~~~~dG-~e~~E~~~p~~vL~~aG~~V~~~S~~~g 66 (242)
T 3l3b_A 24 LNSAVILAGCGHMDG-SEIREAVLVMLELDRHNVNFKCFAPNKN 66 (242)
T ss_dssp CEEEEECCCSSTTTS-CCHHHHHHHHHHHHHTTCEEEEEECSSB
T ss_pred CEEEEEEecCCCCCC-eeHHHHHHHHHHHHHCCCEEEEEecCCC
Confidence 48887765 22 2333455667888889999999998643
No 298
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=30.23 E-value=34 Score=30.98 Aligned_cols=32 Identities=6% Similarity=0.141 Sum_probs=27.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeC
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKG-LKVTLVTT 49 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rG-h~Vt~~~~ 49 (468)
.|||.|+..|..| ..+|+.|++.| |+|+++..
T Consensus 24 ~m~IgvIG~G~mG-----~~lA~~L~~~G~~~V~~~dr 56 (317)
T 4ezb_A 24 MTTIAFIGFGEAA-----QSIAGGLGGRNAARLAAYDL 56 (317)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHTTTCSEEEEECG
T ss_pred CCeEEEECccHHH-----HHHHHHHHHcCCCeEEEEeC
Confidence 3799999888777 67899999999 99998764
No 299
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=30.16 E-value=15 Score=32.99 Aligned_cols=32 Identities=19% Similarity=0.180 Sum_probs=27.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
|||+|+..|+.|- .+|..|.+.||+|+++...
T Consensus 3 mkI~iiGaGa~G~-----~~a~~L~~~g~~V~~~~r~ 34 (294)
T 3g17_A 3 LSVAIIGPGAVGT-----TIAYELQQSLPHTTLIGRH 34 (294)
T ss_dssp CCEEEECCSHHHH-----HHHHHHHHHCTTCEEEESS
T ss_pred cEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEec
Confidence 7999998888774 5788899999999999865
No 300
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=30.16 E-value=58 Score=31.21 Aligned_cols=40 Identities=15% Similarity=0.184 Sum_probs=33.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCccc
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDH-KGLKVTLVTTYFIS 53 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~~~~ 53 (468)
--+++...++.|=-.=++.++..++. .|..|.|++.+...
T Consensus 204 ~liiI~G~pG~GKTtl~l~ia~~~~~~~g~~Vl~~s~E~s~ 244 (454)
T 2r6a_A 204 DLIIVAARPSVGKTAFALNIAQNVATKTNENVAIFSLEMSA 244 (454)
T ss_dssp CEEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEEESSSCH
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEEECCCCH
Confidence 35677888888999999999999886 69999999987553
No 301
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=30.13 E-value=61 Score=27.84 Aligned_cols=33 Identities=24% Similarity=0.233 Sum_probs=23.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
||+++++.++.| + =.+++++|+++|++|+++.-
T Consensus 1 mk~vlVTGas~g-I--G~~~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 1 MSIIVISGCATG-I--GAATRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp CCEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCCH-H--HHHHHHHHHHCCCEEEEEeC
Confidence 466666666542 2 24789999999999988753
No 302
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=30.03 E-value=2.6e+02 Score=24.51 Aligned_cols=151 Identities=8% Similarity=-0.040 Sum_probs=78.9
Q ss_pred CCceEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhh-----------------------ccCC
Q 012194 279 KGSVVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDE-----------------------TSQK 335 (468)
Q Consensus 279 ~~~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~-----------------------~~~n 335 (468)
.+.++.|..|..+ ...+..|.+.|.++.++-+.... .+.+.+.+. ...+
T Consensus 13 ~k~VLVVGgG~va-------~rka~~Ll~~Ga~VtViap~~~~-~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~ 84 (274)
T 1kyq_A 13 DKRILLIGGGEVG-------LTRLYKLMPTGCKLTLVSPDLHK-SIIPKFGKFIQNKDQPDYREDAKRFINPNWDPTKNE 84 (274)
T ss_dssp TCEEEEEEESHHH-------HHHHHHHGGGTCEEEEEEEEECT-THHHHHCGGGC-----------CEEECTTCCTTSCC
T ss_pred CCEEEEECCcHHH-------HHHHHHHHhCCCEEEEEcCCCCc-chhHHHHHHHhccccccccchhhcccccccccccCC
Confidence 4557888777644 34566677888887766543211 010011000 0123
Q ss_pred e-EEEeecchHHHhc------ccCcceeeecCCcchHHHHHH-----c---CCceeecccccchhHHHH-----HHHhhh
Q 012194 336 G-LVVNWCPQLEVLA------HEAAGCFLTHCGWNSTMEALS-----L---GVPMVAMPQWSDQSTNGK-----YIMDVW 395 (468)
Q Consensus 336 v-~~~~~vpq~~lL~------~~~~~~~I~HgG~~s~~Eal~-----~---GvP~l~~P~~~DQ~~na~-----~l~~~~ 395 (468)
+ .+..---....|. .+++ +|.--|-..+.+.++ . |+|+-++ |.+..+. .+.+-
T Consensus 85 i~~~i~~~~~~~dL~~l~~~~~adl--Viaat~d~~~n~~I~~~Ar~~f~~~i~VNvv----d~pel~~f~~Pa~~~~g- 157 (274)
T 1kyq_A 85 IYEYIRSDFKDEYLDLENENDAWYI--IMTCIPDHPESARIYHLCKERFGKQQLVNVA----DKPDLCDFYFGANLEIG- 157 (274)
T ss_dssp CSEEECSSCCGGGGCCSSTTCCEEE--EEECCSCHHHHHHHHHHHHHHHCTTSEEEET----TCGGGBSEECCEEEEET-
T ss_pred eeEEEcCCCCHHHHhhcccCCCeEE--EEEcCCChHHHHHHHHHHHHhcCCCcEEEEC----CCcccCeeEeeeEEEeC-
Confidence 3 3332111234455 6777 888888765555443 3 6666222 2333332 22233
Q ss_pred c-ceeEecCCCCCccCHHHHHHHHHHHh---cCccHHHHHHHHHHHHHHHHHH
Q 012194 396 K-MGLKVPADEKGIVRREAIAHCISEIL---EGERGKEIRQNAGKWSNFAKEA 444 (468)
Q Consensus 396 g-~G~~l~~~~~~~~~~~~l~~~i~~ll---~~~~~~~~~~~a~~~~~~~~~~ 444 (468)
+ +-+.+....+...-+..|++.|...| .+++...+-+.+.++++.+++.
T Consensus 158 ~~l~IaIST~Gksp~lA~~ir~~ie~~l~~~p~~~~~~~~~~l~~~R~~ik~~ 210 (274)
T 1kyq_A 158 DRLQILISTNGLSPRFGALVRDEIRNLFTQMGDLALEDAVVKLGELRRGIRLL 210 (274)
T ss_dssp TTEEEEEEESSSCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCCcHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhh
Confidence 3 23333333112333578888888888 6343347778888888888865
No 303
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=29.99 E-value=61 Score=28.78 Aligned_cols=38 Identities=16% Similarity=0.322 Sum_probs=28.9
Q ss_pred CCcEEEEEcCCCccCHHHH--HHHHHHHHhCC-CeEEEEeCC
Q 012194 12 RLVHCLVLSYPAQGHINPL--LQFAKRLDHKG-LKVTLVTTY 50 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~--l~La~~L~~rG-h~Vt~~~~~ 50 (468)
++.|||+++.. .+|-.+. -.|++.|.+.| ++|++...+
T Consensus 3 ~~~kvLiv~G~-~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~ 43 (281)
T 4e5v_A 3 KPIKTLLITGQ-NNHNWQVSHVVLKQILENSGRFDVDFVISP 43 (281)
T ss_dssp CCEEEEEEESC-CSSCHHHHHHHHHHHHHHTTSEEEEEEECC
T ss_pred CceEEEEEcCC-CCCChHHHHHHHHHHHHhcCCEEEEEEeCC
Confidence 56899999544 4886543 57788888888 999999864
No 304
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=29.96 E-value=50 Score=27.19 Aligned_cols=38 Identities=26% Similarity=0.280 Sum_probs=26.9
Q ss_pred CcEEEEEcCCCccCHHHHH-HHHHHHHhCCCeEEEEeCCc
Q 012194 13 LVHCLVLSYPAQGHINPLL-QFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l-~La~~L~~rGh~Vt~~~~~~ 51 (468)
.|||+++... .|+..-+. .+++.|.+.|++|.++.-..
T Consensus 4 mmkilii~~S-~g~T~~la~~i~~~l~~~g~~v~~~~l~~ 42 (199)
T 2zki_A 4 KPNILVLFYG-YGSIVELAKEIGKGAEEAGAEVKIRRVRE 42 (199)
T ss_dssp CCEEEEEECC-SSHHHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred CcEEEEEEeC-ccHHHHHHHHHHHHHHhCCCEEEEEehhH
Confidence 3799887777 88766554 35666777899998876433
No 305
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=29.79 E-value=36 Score=30.21 Aligned_cols=30 Identities=17% Similarity=0.229 Sum_probs=24.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVT 48 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 48 (468)
|||.|+..|..|. .+++.|.+.||+|+++.
T Consensus 4 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~ 33 (295)
T 1yb4_A 4 MKLGFIGLGIMGS-----PMAINLARAGHQLHVTT 33 (295)
T ss_dssp CEEEECCCSTTHH-----HHHHHHHHTTCEEEECC
T ss_pred CEEEEEccCHHHH-----HHHHHHHhCCCEEEEEc
Confidence 7999997776664 46888989999998664
No 306
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=29.71 E-value=67 Score=26.72 Aligned_cols=38 Identities=18% Similarity=0.215 Sum_probs=27.0
Q ss_pred CCcEEEEEcCCCccCHHHHH-HHHHHHHhCCCeEEEEeC
Q 012194 12 RLVHCLVLSYPAQGHINPLL-QFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l-~La~~L~~rGh~Vt~~~~ 49 (468)
+.|||+++.....|+..-+. .+++.|.+.|++|.++--
T Consensus 5 ~mmkilii~~S~~g~T~~la~~i~~~l~~~g~~v~~~~l 43 (211)
T 1ydg_A 5 APVKLAIVFYSSTGTGYAMAQEAAEAGRAAGAEVRLLKV 43 (211)
T ss_dssp CCCEEEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCCeEEEEEECCCChHHHHHHHHHHHHhcCCCEEEEEec
Confidence 35799877666678766554 456777778999988764
No 307
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=29.68 E-value=1.4e+02 Score=25.29 Aligned_cols=86 Identities=14% Similarity=0.112 Sum_probs=53.3
Q ss_pred hhhHhHhhhcCCCCceEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEEeecchHH
Q 012194 267 NESCIKWLNDRAKGSVVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQLE 346 (468)
Q Consensus 267 ~~~~~~~l~~~~~~~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~ 346 (468)
.+.+.+|+.. .+.+++|..|+...........+.++|+++|..++.+.. .+ ...+
T Consensus 21 ~~~l~~~~~~--~~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~~v~~-------~~----------------d~~~ 75 (229)
T 1fy2_A 21 LPLIANQLNG--RRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVTGIHR-------VA----------------DPLA 75 (229)
T ss_dssp HHHHHHHHTT--CCEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEEETTS-------SS----------------CHHH
T ss_pred HHHHHHHhcC--CCeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEec-------cc----------------cHHH
Confidence 4557777763 345999988875444455677888999999876542210 00 1124
Q ss_pred HhcccCcceeeecCCcc--------------hHHHHHHcCCceeecc
Q 012194 347 VLAHEAAGCFLTHCGWN--------------STMEALSLGVPMVAMP 379 (468)
Q Consensus 347 lL~~~~~~~~I~HgG~~--------------s~~Eal~~GvP~l~~P 379 (468)
.+..++. +|--||.. .+.|++..|+|++.+-
T Consensus 76 ~l~~ad~--I~lpGG~~~~~~~~l~~~gl~~~l~~~~~~G~p~~G~s 120 (229)
T 1fy2_A 76 AIEKAEI--IIVGGGNTFQLLKESRERGLLAPMADRVKRGALYIGWS 120 (229)
T ss_dssp HHHHCSE--EEECCSCHHHHHHHHHHTTCHHHHHHHHHTTCEEEEET
T ss_pred HHhcCCE--EEECCCcHHHHHHHHHHCChHHHHHHHHHcCCEEEEEC
Confidence 4556666 66666643 3445566899997754
No 308
>3ga2_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Bacillus subtilis}
Probab=29.67 E-value=58 Score=28.17 Aligned_cols=39 Identities=18% Similarity=0.121 Sum_probs=27.2
Q ss_pred HHHHHHHhcCCCCCccEEEeCCCcc-------hHHHHHHHcCCceEEEc
Q 012194 102 LCELVEKMNGSVVPVDCIVYDSFLP-------WALDVAKKFGLVGAAFL 143 (468)
Q Consensus 102 ~~~~l~~l~~~~~p~DlVI~D~~~~-------~~~~~A~~lgiP~i~~~ 143 (468)
+.++++++.. .||+|++|.... .|..+.-.+++|+|.+.
T Consensus 99 ll~al~~L~~---~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGVA 144 (246)
T 3ga2_A 99 IIEAAKKLET---EPDVFLFDGNGYLHYNHMGVATHAAFFLGKPTIGIA 144 (246)
T ss_dssp HHHHHHHCSS---CCSCEEEEBCSSSSTTSCCHHHHHHHHHTSCEEEEE
T ss_pred HHHHHHhcCC---CCCEEEEcCcEEecCCCcchhheeeeecCCCEEeee
Confidence 4444555542 359999998642 26677788999999975
No 309
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=29.65 E-value=37 Score=31.49 Aligned_cols=34 Identities=24% Similarity=0.162 Sum_probs=26.6
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
|+.++|+++..|-.| +.+|..|+++|++|+++-.
T Consensus 9 m~~~dVvIVGaG~aG-----l~~A~~L~~~G~~v~viE~ 42 (379)
T 3alj_A 9 GKTRRAEVAGGGFAG-----LTAAIALKQNGWDVRLHEK 42 (379)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCCCeEEEECCCHHH-----HHHHHHHHHCCCCEEEEec
Confidence 456789998877656 7788899999999999854
No 310
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=29.57 E-value=33 Score=30.73 Aligned_cols=33 Identities=24% Similarity=0.232 Sum_probs=26.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
.+||.|+..|..|+ .+|..|+++||+|+++...
T Consensus 15 ~~~I~VIG~G~mG~-----~iA~~la~~G~~V~~~d~~ 47 (302)
T 1f0y_A 15 VKHVTVIGGGLMGA-----GIAQVAAATGHTVVLVDQT 47 (302)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECSC
T ss_pred CCEEEEECCCHHHH-----HHHHHHHhCCCeEEEEECC
Confidence 35799998887776 5788899999999987653
No 311
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=29.47 E-value=69 Score=30.61 Aligned_cols=42 Identities=17% Similarity=0.264 Sum_probs=35.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcccc
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISK 54 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~ 54 (468)
+..|+++..++.|-..-+..||..|+++|++|.++..+.++.
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~~l~~~G~kVllv~~D~~R~ 141 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLARYFQKRGYKVGVVCSDTWRP 141 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHHHHHTTTCCEEEEECCCSST
T ss_pred CeEEEEECcCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCcch
Confidence 345667777788999999999999999999999999887754
No 312
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=29.47 E-value=58 Score=28.41 Aligned_cols=37 Identities=14% Similarity=0.143 Sum_probs=26.4
Q ss_pred cCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 10 SCRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
+|...|+++++.++.| + =.++|++|+++|++|.+...
T Consensus 22 ~m~~~k~vlITGas~g-I--G~a~a~~l~~~G~~V~~~~~ 58 (272)
T 4e3z_A 22 SMSDTPVVLVTGGSRG-I--GAAVCRLAARQGWRVGVNYA 58 (272)
T ss_dssp --CCSCEEEETTTTSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred hccCCCEEEEECCCch-H--HHHHHHHHHHCCCEEEEEcC
Confidence 3455678888877653 2 25889999999999987744
No 313
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=29.37 E-value=33 Score=30.47 Aligned_cols=31 Identities=16% Similarity=0.246 Sum_probs=24.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
|||.|+..|..|. .+++.|.+.||+|+++..
T Consensus 1 m~i~iiG~G~mG~-----~~a~~l~~~g~~V~~~~~ 31 (296)
T 2gf2_A 1 MPVGFIGLGNMGN-----PMAKNLMKHGYPLIIYDV 31 (296)
T ss_dssp CCEEEECCSTTHH-----HHHHHHHHTTCCEEEECS
T ss_pred CeEEEEeccHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 5889988777774 578889999999987754
No 314
>2bln_A Protein YFBG; transferase, formyltransferase, L-ARA4N biosynthesis, methyltransferase; HET: FON U5P; 1.2A {Escherichia coli} SCOP: b.46.1.1 c.65.1.1 PDB: 1yrw_A
Probab=29.35 E-value=1.3e+02 Score=27.03 Aligned_cols=32 Identities=16% Similarity=0.145 Sum_probs=21.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
|||+|+..+.. .....++|.++||+|..+.+.
T Consensus 1 mrivf~gt~~f-----a~~~L~~L~~~~~~i~~Vvt~ 32 (305)
T 2bln_A 1 MKTVVFAYHDM-----GCLGIEALLAAGYEISAIFTH 32 (305)
T ss_dssp CEEEEEECHHH-----HHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEEEcCHH-----HHHHHHHHHHCCCcEEEEEcC
Confidence 68888865322 234456777789999876653
No 315
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=29.14 E-value=44 Score=26.97 Aligned_cols=39 Identities=10% Similarity=0.162 Sum_probs=29.2
Q ss_pred CcEEEEEcCCCc--c-CHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 13 LVHCLVLSYPAQ--G-HINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 13 ~~~il~~~~~~~--G-H~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
+.+|+++|.=+. . --++...|++.|.++|.+|.|+.+|-
T Consensus 30 A~~ViIVPGYGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 71 (186)
T 2bru_C 30 SHSVIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPV 71 (186)
T ss_dssp CSEEEEECSBHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSS
T ss_pred CCeEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 457777764322 1 23588899999999999999999864
No 316
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=29.10 E-value=52 Score=29.70 Aligned_cols=33 Identities=21% Similarity=0.186 Sum_probs=21.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
.++|++... .|-+- ..|+++|.++||+|+.+.-
T Consensus 9 ~~~vlVTGa--tGfIG--~~l~~~Ll~~G~~V~~~~r 41 (338)
T 2rh8_A 9 KKTACVVGG--TGFVA--SLLVKLLLQKGYAVNTTVR 41 (338)
T ss_dssp CCEEEEECT--TSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECC--chHHH--HHHHHHHHHCCCEEEEEEc
Confidence 356665543 33332 3678899999999987653
No 317
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=28.99 E-value=35 Score=30.50 Aligned_cols=34 Identities=24% Similarity=0.266 Sum_probs=23.9
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
.|+|++.... |.+- ..|+++|.++||+|+.++-.
T Consensus 7 ~~~vlVtGat--G~iG--~~l~~~L~~~g~~V~~~~r~ 40 (321)
T 3vps_A 7 KHRILITGGA--GFIG--GHLARALVASGEEVTVLDDL 40 (321)
T ss_dssp CCEEEEETTT--SHHH--HHHHHHHHHTTCCEEEECCC
T ss_pred CCeEEEECCC--ChHH--HHHHHHHHHCCCEEEEEecC
Confidence 4677766443 3332 36889999999999988653
No 318
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=28.98 E-value=57 Score=28.80 Aligned_cols=37 Identities=16% Similarity=0.154 Sum_probs=29.6
Q ss_pred cEE-EEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 14 VHC-LVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 14 ~~i-l~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
||+ .|..-|+-|--.-...||..|+++|++|.++=.+
T Consensus 2 MkvIavs~KGGvGKTT~a~nLA~~La~~G~rVlliD~D 39 (289)
T 2afh_E 2 MRQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCD 39 (289)
T ss_dssp CEEEEEEECTTSSHHHHHHHHHHHHHHTTCCEEEEEEC
T ss_pred ceEEEEeCCCcCcHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 554 4555566688999999999999999999987554
No 319
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=28.97 E-value=2.3e+02 Score=22.89 Aligned_cols=146 Identities=15% Similarity=0.132 Sum_probs=75.5
Q ss_pred CCceEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEEeecchHHHhcccCcceeee
Q 012194 279 KGSVVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQLEVLAHEAAGCFLT 358 (468)
Q Consensus 279 ~~~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~I~ 358 (468)
+.|.|-|-+||.. +....++....++.+|..+-..+-+.+. .|+.. .+|+-.. --...++ +|.
T Consensus 11 ~~P~V~IimGS~S--D~~v~~~a~~~l~~~gi~~ev~V~saHR--~p~~l----------~~~~~~a-~~~g~~V--iIa 73 (173)
T 4grd_A 11 SAPLVGVLMGSSS--DWDVMKHAVAILQEFGVPYEAKVVSAHR--MPDEM----------FDYAEKA-RERGLRA--IIA 73 (173)
T ss_dssp SSCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--SHHHH----------HHHHHHH-TTTTCSE--EEE
T ss_pred CCCeEEEEeCcHh--HHHHHHHHHHHHHHcCCCEEEEEEcccc--CHHHH----------HHHHHHH-HhcCCeE--EEE
Confidence 4457888888875 5677888899999998775444433221 11111 0111000 0012344 777
Q ss_pred cCCcc----hHHHHHHcCCceeecccccch---hHHHHHHHhhh-cceeEec-CCCCCccCHHHHHHHHHHHhcCccHHH
Q 012194 359 HCGWN----STMEALSLGVPMVAMPQWSDQ---STNGKYIMDVW-KMGLKVP-ADEKGIVRREAIAHCISEILEGERGKE 429 (468)
Q Consensus 359 HgG~~----s~~Eal~~GvP~l~~P~~~DQ---~~na~~l~~~~-g~G~~l~-~~~~~~~~~~~l~~~i~~ll~~~~~~~ 429 (468)
=+|.- ++..+ ..-+|+|.+|..... .+--.-+.+.- |+.+..- ...++..++.-+...|-. +.|+ +
T Consensus 74 ~AG~aahLpgvvA~-~t~~PVIgVPv~~~~l~G~dsLlSivqMP~Gvpvatv~i~~~~a~NAallA~~ILa-~~d~---~ 148 (173)
T 4grd_A 74 GAGGAAHLPGMLAA-KTTVPVLGVPVASKYLKGVDSLHSIVQMPKGVPVATFAIGEAGAANAALFAVSILS-GNSV---D 148 (173)
T ss_dssp EEESSCCHHHHHHH-HCCSCEEEEEECCTTTTTHHHHHHHHCCCTTSCCEECCSSHHHHHHHHHHHHHHHT-TSCH---H
T ss_pred eccccccchhhhee-cCCCCEEEEEcCCCCCCchhHHHHHHhCCCCCCceEEecCCcchHHHHHHHHHHHc-CCCH---H
Confidence 66644 44444 357999999975432 22222233320 4433221 110011223333333322 4665 8
Q ss_pred HHHHHHHHHHHHHHHHH
Q 012194 430 IRQNAGKWSNFAKEAVA 446 (468)
Q Consensus 430 ~~~~a~~~~~~~~~~~~ 446 (468)
++++.+.++++.++.+.
T Consensus 149 l~~kl~~~r~~~~~~v~ 165 (173)
T 4grd_A 149 YANRLAAFRVRQNEAAH 165 (173)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999998888886543
No 320
>2vrn_A Protease I, DR1199; cysteine sulfenic acid, DJ-1/THIJ/PFPI superfamily, protease hydrolase, stress response; 2.15A {Deinococcus radiodurans}
Probab=28.93 E-value=1.2e+02 Score=24.67 Aligned_cols=41 Identities=10% Similarity=-0.052 Sum_probs=30.5
Q ss_pred cCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 10 SCRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
+++.+||+++...+.. ..-+....+.|.+.|++|++++...
T Consensus 6 ~~~~~~v~il~~~g~~-~~e~~~~~~~l~~ag~~v~~vs~~~ 46 (190)
T 2vrn_A 6 DLTGKKIAILAADGVE-EIELTSPRAAIEAAGGTTELISLEP 46 (190)
T ss_dssp CCTTCEEEEECCTTCB-HHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCCCEEEEEeCCCCC-HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 4556899998776554 4456666788888999999999754
No 321
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=28.86 E-value=45 Score=29.56 Aligned_cols=32 Identities=25% Similarity=0.256 Sum_probs=25.3
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
.+||.|+..|..| ..+|+.|+++||+|+++..
T Consensus 4 ~~kV~VIGaG~mG-----~~iA~~la~~G~~V~l~d~ 35 (283)
T 4e12_A 4 ITNVTVLGTGVLG-----SQIAFQTAFHGFAVTAYDI 35 (283)
T ss_dssp CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECCCHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 3589999766656 4688999999999998754
No 322
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=28.74 E-value=40 Score=32.66 Aligned_cols=34 Identities=15% Similarity=0.100 Sum_probs=28.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
..|||.++..|..| +.+|..|+++||+|+++...
T Consensus 7 ~~~~I~VIG~G~vG-----~~lA~~la~~G~~V~~~d~~ 40 (478)
T 2y0c_A 7 GSMNLTIIGSGSVG-----LVTGACLADIGHDVFCLDVD 40 (478)
T ss_dssp CCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CCceEEEECcCHHH-----HHHHHHHHhCCCEEEEEECC
Confidence 46999999887666 56788999999999998653
No 323
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=28.72 E-value=45 Score=30.46 Aligned_cols=36 Identities=14% Similarity=0.010 Sum_probs=24.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
++.|+|++.. +.|.+- ..|+++|.++||+|+.+.-.
T Consensus 7 ~~~~~vlVtG--atG~iG--~~l~~~L~~~g~~V~~~~r~ 42 (357)
T 1rkx_A 7 WQGKRVFVTG--HTGFKG--GWLSLWLQTMGATVKGYSLT 42 (357)
T ss_dssp HTTCEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred hCCCEEEEEC--CCchHH--HHHHHHHHhCCCeEEEEeCC
Confidence 3457777664 344443 45788999999999988753
No 324
>1meo_A Phosophoribosylglycinamide formyltransferase; purine biosynthesis; 1.72A {Homo sapiens} SCOP: c.65.1.1 PDB: 1njs_A* 1rbm_A* 1rbq_A* 1rby_A* 1rbz_A* 1rc0_A* 1rc1_A* 1zly_A* 1zlx_A* 1mej_B 1men_A*
Probab=28.67 E-value=1.9e+02 Score=24.15 Aligned_cols=107 Identities=9% Similarity=0.071 Sum_probs=0.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCccccccccCCCCCCCCeEEEEcCCCCCCCCCCccccHHHHH
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHK--GLKVTLVTTYFISKSLHRDSSSSSASIALEAISDGYDQGGSAQAESIEAYL 91 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~~~~~~~~~~~~~~~~~~~ 91 (468)
+||+++..|+.+-+..++ +.+.+. +|+|..+.+........+. +...|+.+..++..-..
T Consensus 1 ~riaVl~SG~Gs~L~aLi---~~~~~~~~~~~I~~Vvs~~~~~~~~~~--A~~~gIp~~~~~~~~~~------------- 62 (209)
T 1meo_A 1 ARVAVLISGTGSNLQALI---DSTREPNSSAQIDIVISNKAAVAGLDK--AERAGIPTRVINHKLYK------------- 62 (209)
T ss_dssp CEEEEEESSSCTTHHHHH---HHHHSTTCSCEEEEEEESSTTCHHHHH--HHHTTCCEEECCGGGSS-------------
T ss_pred CeEEEEEECCchHHHHHH---HHHhcCCCCcEEEEEEeCCCChHHHHH--HHHcCCCEEEECccccC-------------
Q ss_pred HHHHHhchHHHHHHHHHhcCCCCCccEEEeCCCc-chHHHHHHHcCCceEEEccc
Q 012194 92 EKFWQIGPRSLCELVEKMNGSVVPVDCIVYDSFL-PWALDVAKKFGLVGAAFLTQ 145 (468)
Q Consensus 92 ~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~~~-~~~~~~A~~lgiP~i~~~~~ 145 (468)
....+.+.+.+..++..+ |+||+-.+. .....+-......++-+.++
T Consensus 63 ------~r~~~~~~~~~~l~~~~~-Dliv~a~y~~il~~~~l~~~~~~~iNiHpS 110 (209)
T 1meo_A 63 ------NRVEFDSAIDLVLEEFSI-DIVCLAGFMRILSGPFVQKWNGKMLNIHPS 110 (209)
T ss_dssp ------SHHHHHHHHHHHHHHTTC-CEEEEESCCSCCCHHHHHHTTTSEEEEESS
T ss_pred ------chhhhhHHHHHHHHhcCC-CEEEEcchhhhCCHHHHhhhcCCEEEEccC
No 325
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=28.48 E-value=58 Score=28.64 Aligned_cols=37 Identities=16% Similarity=0.101 Sum_probs=25.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
|.+.|+++++.++.| -=.++|++|+++|++|.++.-.
T Consensus 21 m~~~k~~lVTGas~G---IG~aia~~la~~G~~V~~~~r~ 57 (279)
T 3sju_A 21 MSRPQTAFVTGVSSG---IGLAVARTLAARGIAVYGCARD 57 (279)
T ss_dssp ----CEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred ccCCCEEEEeCCCCH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 444578888877654 2257899999999999887643
No 326
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=28.46 E-value=48 Score=29.48 Aligned_cols=32 Identities=22% Similarity=0.343 Sum_probs=22.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
|||++... .|.+- ..|+++|.++||+|+.+.-
T Consensus 1 m~vlVtGa--tG~iG--~~l~~~L~~~g~~V~~~~r 32 (312)
T 3ko8_A 1 MRIVVTGG--AGFIG--SHLVDKLVELGYEVVVVDN 32 (312)
T ss_dssp CEEEEETT--TSHHH--HHHHHHHHHTTCEEEEECC
T ss_pred CEEEEECC--CChHH--HHHHHHHHhCCCEEEEEeC
Confidence 56665543 33333 3678999999999998764
No 327
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=28.45 E-value=75 Score=25.21 Aligned_cols=38 Identities=18% Similarity=0.206 Sum_probs=27.9
Q ss_pred cEEEEEcCCCccCHHHHH-HHHHHHHhCCCeEEEEeCCc
Q 012194 14 VHCLVLSYPAQGHINPLL-QFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l-~La~~L~~rGh~Vt~~~~~~ 51 (468)
|||+++-...+|+..-+. .+++.|.+.|++|.++....
T Consensus 1 Mkv~IvY~S~tGnT~~~A~~ia~~l~~~g~~v~~~~~~~ 39 (161)
T 3hly_A 1 MSVLIGYLSDYGYSDRLSQAIGRGLVKTGVAVEMVDLRA 39 (161)
T ss_dssp -CEEEEECTTSTTHHHHHHHHHHHHHHTTCCEEEEETTT
T ss_pred CEEEEEEECCChHHHHHHHHHHHHHHhCCCeEEEEECCC
Confidence 678776666689887655 56888888999998876543
No 328
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=28.42 E-value=77 Score=28.83 Aligned_cols=79 Identities=10% Similarity=-0.066 Sum_probs=47.0
Q ss_pred eEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEEeecchHHHhcccCcceeeecCC
Q 012194 282 VVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQLEVLAHEAAGCFLTHCG 361 (468)
Q Consensus 282 ~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~I~HgG 361 (468)
.|+++--+... +....+...+.+.+..+.+..... +.... .. -...+-..+++ +|.-||
T Consensus 33 ~vi~Np~sg~~---~~~~~i~~~l~~~g~~~~~~~t~~-----~~~~~----------~~-~~~~~~~~~d~--vvv~GG 91 (332)
T 2bon_A 33 LLILNGKSTDN---LPLREAIMLLREEGMTIHVRVTWE-----KGDAA----------RY-VEEARKFGVAT--VIAGGG 91 (332)
T ss_dssp EEEECSSSTTC---HHHHHHHHHHHTTTCCEEEEECCS-----TTHHH----------HH-HHHHHHHTCSE--EEEEES
T ss_pred EEEECCCCCCC---chHHHHHHHHHHcCCcEEEEEecC-----cchHH----------HH-HHHHHhcCCCE--EEEEcc
Confidence 45555433322 456678888888887765443221 11100 00 11223345677 999999
Q ss_pred cchHHHHHH--------cCCceeecccc
Q 012194 362 WNSTMEALS--------LGVPMVAMPQW 381 (468)
Q Consensus 362 ~~s~~Eal~--------~GvP~l~~P~~ 381 (468)
=||+.|++. .++|+.++|..
T Consensus 92 DGTl~~v~~~l~~~~~~~~~plgiiP~G 119 (332)
T 2bon_A 92 DGTINEVSTALIQCEGDDIPALGILPLG 119 (332)
T ss_dssp HHHHHHHHHHHHHCCSSCCCEEEEEECS
T ss_pred chHHHHHHHHHhhcccCCCCeEEEecCc
Confidence 999999853 57899889963
No 329
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=28.35 E-value=31 Score=31.17 Aligned_cols=33 Identities=9% Similarity=0.139 Sum_probs=26.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCC-eEEEEeC
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGL-KVTLVTT 49 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh-~Vt~~~~ 49 (468)
..|||.|+..|..| ..+|+.|++.|| +|+++..
T Consensus 23 ~~~~I~iIG~G~mG-----~~~A~~L~~~G~~~V~~~dr 56 (312)
T 3qsg_A 23 NAMKLGFIGFGEAA-----SAIASGLRQAGAIDMAAYDA 56 (312)
T ss_dssp --CEEEEECCSHHH-----HHHHHHHHHHSCCEEEEECS
T ss_pred CCCEEEEECccHHH-----HHHHHHHHHCCCCeEEEEcC
Confidence 35799999877666 478999999999 9998765
No 330
>3n7t_A Macrophage binding protein; seattle structural genomics center for infectious disease, S macrophage, pathogenic fungus, coccidioidomycosis; 2.10A {Coccidioides immitis} SCOP: c.23.16.0
Probab=28.25 E-value=1e+02 Score=26.66 Aligned_cols=38 Identities=18% Similarity=0.205 Sum_probs=27.3
Q ss_pred cEEEEEcCCCc----------c-CHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 14 VHCLVLSYPAQ----------G-HINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 14 ~~il~~~~~~~----------G-H~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
+||+++..... | ...=++.-...|.+.|++|+++++..
T Consensus 10 kkvlvvlt~~~~~~~~~g~~tG~~~~E~~~p~~~l~~aG~~V~~aSp~g 58 (247)
T 3n7t_A 10 RKALLAITSAHPPFWPDGKRTGLFFSEALHPFNELTAAGFEVDVASETG 58 (247)
T ss_dssp SEEEEECCCCCCBCSTTSCBCCBCHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CeEEEEECCCCcccCCCCCCCcccHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 48887655421 1 24457777889999999999999743
No 331
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=28.07 E-value=52 Score=28.76 Aligned_cols=34 Identities=12% Similarity=0.038 Sum_probs=26.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 15 HCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 15 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
|++++|.++.|= =.++|++|++.|.+|.+..-..
T Consensus 8 KvalVTGas~GI---G~aia~~la~~Ga~Vv~~~r~~ 41 (258)
T 4gkb_A 8 KVVIVTGGASGI---GGAISMRLAEERAIPVVFARHA 41 (258)
T ss_dssp CEEEEETTTSHH---HHHHHHHHHHTTCEEEEEESSC
T ss_pred CEEEEeCCCCHH---HHHHHHHHHHcCCEEEEEECCc
Confidence 788899887751 1678999999999999877543
No 332
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=28.06 E-value=60 Score=27.13 Aligned_cols=20 Identities=15% Similarity=0.124 Sum_probs=16.8
Q ss_pred HHHHHHHH-hCCCeEEEEeCC
Q 012194 31 LQFAKRLD-HKGLKVTLVTTY 50 (468)
Q Consensus 31 l~La~~L~-~rGh~Vt~~~~~ 50 (468)
.+++++|. ++||+|+.++-.
T Consensus 19 ~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 19 QXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp HHHHHHHHHHCCCEEEEEESS
T ss_pred HHHHHHHHhcCCceEEEEecC
Confidence 57889999 899999988754
No 333
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=27.84 E-value=30 Score=30.19 Aligned_cols=29 Identities=17% Similarity=0.359 Sum_probs=23.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLV 47 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~ 47 (468)
|||.|+..|..|. .+|+.|.+.||+|++.
T Consensus 1 M~I~iIG~G~mG~-----~la~~l~~~g~~V~~~ 29 (264)
T 1i36_A 1 LRVGFIGFGEVAQ-----TLASRLRSRGVEVVTS 29 (264)
T ss_dssp CEEEEESCSHHHH-----HHHHHHHHTTCEEEEC
T ss_pred CeEEEEechHHHH-----HHHHHHHHCCCeEEEe
Confidence 6898887766664 5789999999999884
No 334
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=27.73 E-value=3.2e+02 Score=24.15 Aligned_cols=106 Identities=10% Similarity=0.136 Sum_probs=61.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCc--cccccccCCCCCCCCeEEEEcCCCCCCCCCCcccc
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHK--GLKVTLVTTYF--ISKSLHRDSSSSSASIALEAISDGYDQGGSAQAES 86 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~--~~~~~~~~~~~~~~~i~f~~~~~~~~~~~~~~~~~ 86 (468)
.+++||+++..+. || -+.+|..+-.+. ..+|..+.+.. ....+++. |+.+..+|.... +
T Consensus 88 ~~~~ri~vl~Sg~-g~--~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~------gIp~~~~~~~~~--------~ 150 (286)
T 3n0v_A 88 NHRPKVVIMVSKA-DH--CLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAHWH------KIPYYHFALDPK--------D 150 (286)
T ss_dssp TCCCEEEEEESSC-CH--HHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHHHT------TCCEEECCCBTT--------B
T ss_pred CCCcEEEEEEeCC-CC--CHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHHHc------CCCEEEeCCCcC--------C
Confidence 4578999877775 44 344555554332 47888766533 33444443 888988874221 1
Q ss_pred HHHHHHHHHHhchHHHHHHHHHhcCCCCCccEEEeCCCc-chHHHHHHHcCCceEEEcccc
Q 012194 87 IEAYLEKFWQIGPRSLCELVEKMNGSVVPVDCIVYDSFL-PWALDVAKKFGLVGAAFLTQS 146 (468)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~~~-~~~~~~A~~lgiP~i~~~~~~ 146 (468)
- ......+.+.+++.. +|+||.=.+. .....+.+.+.-.++-+.++.
T Consensus 151 r--------~~~~~~~~~~l~~~~-----~Dlivla~y~~il~~~~l~~~~~~~iNiHpSl 198 (286)
T 3n0v_A 151 K--------PGQERKVLQVIEETG-----AELVILARYMQVLSPELCRRLDGWAINIHHSL 198 (286)
T ss_dssp H--------HHHHHHHHHHHHHHT-----CSEEEESSCCSCCCHHHHHHTTTSEEEEEECS
T ss_pred H--------HHHHHHHHHHHHhcC-----CCEEEecccccccCHHHHhhhcCCeEEecccc
Confidence 0 011233445555543 5999987765 445666677777777766543
No 335
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=27.65 E-value=50 Score=28.53 Aligned_cols=38 Identities=18% Similarity=0.131 Sum_probs=24.9
Q ss_pred CcEEEEEcCCCccCH--HHHHHHHHHHHhCCCeEEEEeCC
Q 012194 13 LVHCLVLSYPAQGHI--NPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 13 ~~~il~~~~~~~GH~--~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
+.-++++.+|+.||- ..+..+|+.|+++|+.|..+-..
T Consensus 55 ~~p~Vl~~HG~g~~~~~~~~~~~a~~la~~Gy~Vl~~D~r 94 (259)
T 4ao6_A 55 SDRLVLLGHGGTTHKKVEYIEQVAKLLVGRGISAMAIDGP 94 (259)
T ss_dssp CSEEEEEEC--------CHHHHHHHHHHHTTEEEEEECCC
T ss_pred CCCEEEEeCCCcccccchHHHHHHHHHHHCCCeEEeeccC
Confidence 345778888887774 34778999999999999877543
No 336
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=27.62 E-value=33 Score=33.28 Aligned_cols=35 Identities=14% Similarity=0.250 Sum_probs=27.5
Q ss_pred cCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 10 SCRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
+|.+++|.|+..|..| .++|..|+++||+|+++..
T Consensus 12 ~~~~~~IgvIGlG~MG-----~~lA~~La~~G~~V~v~~r 46 (480)
T 2zyd_A 12 HMSKQQIGVVGMAVMG-----RNLALNIESRGYTVSIFNR 46 (480)
T ss_dssp ---CBSEEEECCSHHH-----HHHHHHHHTTTCCEEEECS
T ss_pred ccCCCeEEEEccHHHH-----HHHHHHHHhCCCeEEEEeC
Confidence 4778899999888777 4689999999999998764
No 337
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=27.61 E-value=71 Score=28.26 Aligned_cols=38 Identities=13% Similarity=-0.069 Sum_probs=27.7
Q ss_pred CcEEEEEcCCCc-cCHH---HHHHHHHHHHhCCCeEEEEeCC
Q 012194 13 LVHCLVLSYPAQ-GHIN---PLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 13 ~~~il~~~~~~~-GH~~---p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
+|||+++..+.. -|-. -...++++|.++||+|..+...
T Consensus 2 ~~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~~~ 43 (306)
T 1iow_A 2 TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPK 43 (306)
T ss_dssp CCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEecC
Confidence 378998876543 2222 3457999999999999988765
No 338
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=27.60 E-value=16 Score=18.61 Aligned_cols=17 Identities=24% Similarity=0.606 Sum_probs=14.1
Q ss_pred CcchHHHHHHcCCceee
Q 012194 361 GWNSTMEALSLGVPMVA 377 (468)
Q Consensus 361 G~~s~~Eal~~GvP~l~ 377 (468)
|.|+++-.|..|.|.++
T Consensus 1 giGa~LKVLa~~LP~li 17 (26)
T 3qrx_B 1 GIGAVLKVLTTGLPALI 17 (26)
T ss_pred CchHHHHHHHccchHHH
Confidence 67888888999988765
No 339
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=27.59 E-value=70 Score=27.13 Aligned_cols=39 Identities=10% Similarity=0.158 Sum_probs=27.7
Q ss_pred CCc-EEEEEcCCCccC----HHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 12 RLV-HCLVLSYPAQGH----INPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 12 ~~~-~il~~~~~~~GH----~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
++| +|.+++....+- ..-...|++.|+++|+.|.+-...
T Consensus 7 ~~m~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg~ 50 (216)
T 1ydh_A 7 SRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGS 50 (216)
T ss_dssp CSCSEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCS
T ss_pred CCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 345 688887665542 345678888999999998776654
No 340
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=27.44 E-value=46 Score=31.10 Aligned_cols=35 Identities=20% Similarity=0.259 Sum_probs=28.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
+...+|+++..|-.| +.+|..|+++|++|+++-..
T Consensus 24 ~~~~dV~IVGaG~aG-----l~~A~~L~~~G~~v~v~E~~ 58 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVG-----LTMAKLLQQNGIDVSVYERD 58 (398)
T ss_dssp CTTCEEEEECCSHHH-----HHHHHHHHTTTCEEEEEECS
T ss_pred cCCCCEEEECCCHHH-----HHHHHHHHHCCCCEEEEeCC
Confidence 455689998887555 67888999999999998753
No 341
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=27.25 E-value=52 Score=29.27 Aligned_cols=34 Identities=12% Similarity=0.089 Sum_probs=23.7
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
.|+|+++. +.|.+- ..++++|.++||+|+.++-.
T Consensus 4 ~~~ilVtG--atG~iG--~~l~~~L~~~g~~V~~~~R~ 37 (313)
T 1qyd_A 4 KSRVLIVG--GTGYIG--KRIVNASISLGHPTYVLFRP 37 (313)
T ss_dssp CCCEEEES--TTSTTH--HHHHHHHHHTTCCEEEECCS
T ss_pred CCEEEEEc--CCcHHH--HHHHHHHHhCCCcEEEEECC
Confidence 35776664 344443 35788899999999988754
No 342
>3qd7_X Uncharacterized protein YDAL; alpha/beta/alpha fold, endonuclease, hydrolase; 2.30A {Escherichia coli}
Probab=27.21 E-value=7.3 Score=30.56 Aligned_cols=61 Identities=15% Similarity=0.176 Sum_probs=30.1
Q ss_pred HHHHHHHHHhCCCeEEEEEeCCccCCCCc-chhhhccCCeEEEeecchH-HHhcccCcceeeecCCcchH
Q 012194 298 MEELAWGLKATNQYFLWVVRESEQAKLPE-NFSDETSQKGLVVNWCPQL-EVLAHEAAGCFLTHCGWNST 365 (468)
Q Consensus 298 ~~~~~~a~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~nv~~~~~vpq~-~lL~~~~~~~~I~HgG~~s~ 365 (468)
+..+++.....+.+.+.++.+.+...-+. .... -.|..|+.+. .|+..+.+ --.|||.|.+
T Consensus 64 L~~fL~~a~~~g~r~V~IIHGKG~gs~~~~~vLk-----~~V~~wL~~~~~V~~f~~a--~~~~GG~Gat 126 (137)
T 3qd7_X 64 VFSFIQQALADGLRNVLIIHGKGRDDKSHANIVR-----SYVARWLTEFDDVQAYCTA--LPHHGGSGAC 126 (137)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCCSSTTSHHHHHH-----HHHHHHHHTSTTEEEEEEC--CGGGTGGGEE
T ss_pred HHHHHHHHHHCCCCEEEEEECCCCCCCCchHHHH-----HHHHHHHhcCCceeEEeec--CccCCCCEEE
Confidence 44455555566777777776654321100 0100 0133455542 44444444 4568888865
No 343
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=27.16 E-value=43 Score=31.93 Aligned_cols=33 Identities=9% Similarity=0.067 Sum_probs=24.9
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
+.|||.|+..|..| +.+|..|++ ||+|+.+-..
T Consensus 35 ~~mkIaVIGlG~mG-----~~lA~~La~-G~~V~~~D~~ 67 (432)
T 3pid_A 35 EFMKITISGTGYVG-----LSNGVLIAQ-NHEVVALDIV 67 (432)
T ss_dssp CCCEEEEECCSHHH-----HHHHHHHHT-TSEEEEECSC
T ss_pred CCCEEEEECcCHHH-----HHHHHHHHc-CCeEEEEecC
Confidence 35799999777666 356777887 9999987654
No 344
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=27.14 E-value=71 Score=21.82 Aligned_cols=48 Identities=17% Similarity=0.160 Sum_probs=31.2
Q ss_pred cCCceeecccccchhHH-HH--HHHhhhcceeEecCCCCCccCHHHHHHHHHHHhc
Q 012194 371 LGVPMVAMPQWSDQSTN-GK--YIMDVWKMGLKVPADEKGIVRREAIAHCISEILE 423 (468)
Q Consensus 371 ~GvP~l~~P~~~DQ~~n-a~--~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~ 423 (468)
.|+|++++--...|.+. -. ...+- |+...+-+ ..++++|...+++.|.
T Consensus 50 ngkplvvfvngasqndvnefqneakke-gvsydvlk----stdpeeltqrvreflk 100 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEAKKE-GVSYDVLK----STDPEELTQRVREFLK 100 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHHHHH-TCEEEEEE----CCCHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHHHhc-Ccchhhhc----cCCHHHHHHHHHHHHH
Confidence 68999888777767552 22 23344 55544433 4588999888888773
No 345
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=27.08 E-value=57 Score=29.34 Aligned_cols=35 Identities=26% Similarity=0.194 Sum_probs=23.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
+.|+|++... .|-+- ..|+++|.++||+|+.+.-.
T Consensus 13 ~~~~vlVTGa--tG~iG--~~l~~~L~~~g~~V~~~~r~ 47 (335)
T 1rpn_A 13 MTRSALVTGI--TGQDG--AYLAKLLLEKGYRVHGLVAR 47 (335)
T ss_dssp --CEEEEETT--TSHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred cCCeEEEECC--CChHH--HHHHHHHHHCCCeEEEEeCC
Confidence 4577776643 34332 46889999999999988754
No 346
>2ywx_A Phosphoribosylaminoimidazole carboxylase catalyti; rossmann fold, structural genomics, NPPSFA; 2.31A {Methanocaldococcus jannaschii}
Probab=27.06 E-value=2.4e+02 Score=22.43 Aligned_cols=136 Identities=18% Similarity=0.192 Sum_probs=72.3
Q ss_pred EEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEEeecchHHHhcccCcceeeecCCc
Q 012194 283 VYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQLEVLAHEAAGCFLTHCGW 362 (468)
Q Consensus 283 I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~I~HgG~ 362 (468)
|-|-+||.. +....++....++.+|..+-..+-+.+. .|+. ..++...+.-+.+|.=+|.
T Consensus 2 V~Iimgs~S--D~~v~~~a~~~l~~~gi~~dv~V~saHR--~p~~----------------~~~~~~~a~~~ViIa~AG~ 61 (157)
T 2ywx_A 2 ICIIMGSES--DLKIAEKAVNILKEFGVEFEVRVASAHR--TPEL----------------VEEIVKNSKADVFIAIAGL 61 (157)
T ss_dssp EEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT--CHHH----------------HHHHHHHCCCSEEEEEEES
T ss_pred EEEEEccHH--HHHHHHHHHHHHHHcCCCeEEEEEcccC--CHHH----------------HHHHHHhcCCCEEEEEcCc
Confidence 344556654 5677888888999998774333322211 1111 0133332111338887776
Q ss_pred chHHHHHH---cCCceeecccccchhHHHHHHHhh-h--ccee-EecCCCCCccCHHHHHHHHHHHhcCccHHHHHHHHH
Q 012194 363 NSTMEALS---LGVPMVAMPQWSDQSTNGKYIMDV-W--KMGL-KVPADEKGIVRREAIAHCISEILEGERGKEIRQNAG 435 (468)
Q Consensus 363 ~s~~Eal~---~GvP~l~~P~~~DQ~~na~~l~~~-~--g~G~-~l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~a~ 435 (468)
..-+-.+. .-+|+|.+|....-......+.-. | |+.+ .+..+ +-.++.-+...|. -+.|+ +++++.+
T Consensus 62 aa~Lpgvva~~t~~PVIgVP~~~~l~G~daLlS~vqmP~gvpVatV~I~--~~~nAa~lA~~Il-~~~d~---~l~~kl~ 135 (157)
T 2ywx_A 62 AAHLPGVVASLTTKPVIAVPVDAKLDGLDALLSSVQMPPGIPVATVGID--RGENAAILALEIL-ALKDE---NIAKKLI 135 (157)
T ss_dssp SCCHHHHHHTTCSSCEEEEEECSSGGGHHHHHHHHSCCTTSCCEECCTT--CHHHHHHHHHHHH-TTTCH---HHHHHHH
T ss_pred hhhhHHHHHhccCCCEEEecCCCccCcHHHHHHHhcCCCCCeeEEEecC--CcHHHHHHHHHHH-hcCCH---HHHHHHH
Confidence 54444443 358999999833222333333333 0 3221 22221 1345555554443 24565 8999999
Q ss_pred HHHHHHHHH
Q 012194 436 KWSNFAKEA 444 (468)
Q Consensus 436 ~~~~~~~~~ 444 (468)
..++..++.
T Consensus 136 ~~r~~~~~~ 144 (157)
T 2ywx_A 136 EYREKMKKK 144 (157)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 988888764
No 347
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=27.05 E-value=55 Score=29.28 Aligned_cols=30 Identities=17% Similarity=0.169 Sum_probs=25.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVT 48 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 48 (468)
.||.|+..|..|. ++|+.|.++||+|+++-
T Consensus 6 ~kIgfIGLG~MG~-----~mA~~L~~~G~~V~v~d 35 (297)
T 4gbj_A 6 EKIAFLGLGNLGT-----PIAEILLEAGYELVVWN 35 (297)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEC-
T ss_pred CcEEEEecHHHHH-----HHHHHHHHCCCeEEEEe
Confidence 3899999998884 68999999999998753
No 348
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=26.90 E-value=44 Score=29.34 Aligned_cols=31 Identities=19% Similarity=0.188 Sum_probs=24.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
|||.|+..|..| ..+++.|.+.||+|+++..
T Consensus 1 m~i~iiG~G~~G-----~~~a~~l~~~g~~V~~~~~ 31 (279)
T 2f1k_A 1 MKIGVVGLGLIG-----ASLAGDLRRRGHYLIGVSR 31 (279)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECS
T ss_pred CEEEEEcCcHHH-----HHHHHHHHHCCCEEEEEEC
Confidence 688888766555 3578889999999988754
No 349
>1qgu_B Protein (nitrogenase molybdenum iron protein); biological nitrogen fixation, nitrogen metabolism, molybdoenzymes, electron transfer; HET: HCA CFM CLF; 1.60A {Klebsiella pneumoniae} SCOP: c.92.2.3 PDB: 1h1l_B* 1qh1_B* 1qh8_B*
Probab=26.88 E-value=2.7e+02 Score=27.15 Aligned_cols=36 Identities=8% Similarity=-0.013 Sum_probs=26.3
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFI 52 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 52 (468)
...||+++. +-.-.+.|++.|.+.|-+|..+.....
T Consensus 359 ~Gkrv~i~g-----d~~~~~~la~~L~ElGm~vv~v~~~~~ 394 (519)
T 1qgu_B 359 HGKKFGLYG-----DPDFVMGLTRFLLELGCEPTVILSHNA 394 (519)
T ss_dssp TTCEEEEES-----CHHHHHHHHHHHHHTTCEEEEEEETTC
T ss_pred CCCEEEEEC-----CchHHHHHHHHHHHCCCEEEEEEeCCC
Confidence 456888873 344567888999999999987665543
No 350
>1g8m_A Aicar transformylase-IMP cyclohydrolase; homodimer, 2 functional domains, IMPCH domain = alpha/beta/alpha; HET: G; 1.75A {Gallus gallus} SCOP: c.24.1.3 c.97.1.4 PDB: 1thz_A* 2b1g_A* 2b1i_A* 2iu0_A* 2iu3_A* 1m9n_A* 1oz0_A* 1pkx_A* 1p4r_A* 1pl0_A*
Probab=26.87 E-value=28 Score=34.18 Aligned_cols=90 Identities=14% Similarity=0.263 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEEcC--CCCCCCCCCc-cccHHH-HHHHHHH-hchHHH
Q 012194 28 NPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEAIS--DGYDQGGSAQ-AESIEA-YLEKFWQ-IGPRSL 102 (468)
Q Consensus 28 ~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~--~~~~~~~~~~-~~~~~~-~~~~~~~-~~~~~~ 102 (468)
.-++.+|+.|.+.|+++. ++..-...+++. |+....+. .++|+ .+.. .+++.. .-..++. .....+
T Consensus 16 ~~iv~lAk~L~~lGf~I~--ATgGTAk~L~e~------GI~v~~V~k~TgfPE-~l~GRVKTLHP~ihgGiLar~~~~h~ 86 (593)
T 1g8m_A 16 AGLVEFARSLNALGLGLI--ASGGTATALRDA------GLPVRDVSDLTGFPE-MLGGRVKTLHPAVHAGILARNIPEDN 86 (593)
T ss_dssp TTHHHHHHHHHHTTCEEE--ECHHHHHHHHHT------TCCCEEHHHHHSCCC-BGGGTBSSCSHHHHHHHHCCSSHHHH
T ss_pred HhHHHHHHHHHHCCCEEE--EchHHHHHHHHC------CCeEEEeecccCCch-hhcCCccccCchhhhhhccCCCHHHH
Confidence 347889999999999875 444555566643 77777774 23444 2222 222221 1122222 222333
Q ss_pred HHHHHHhcCCCCCccEEEeCCCcchHHH
Q 012194 103 CELVEKMNGSVVPVDCIVYDSFLPWALD 130 (468)
Q Consensus 103 ~~~l~~l~~~~~p~DlVI~D~~~~~~~~ 130 (468)
.++-+.= -.|+|+||++ ++++-..
T Consensus 87 ~~l~~~~---I~~iDlVvvN-LYPF~~t 110 (593)
T 1g8m_A 87 ADMNKQD---FSLVRVVVCN-LYPFVKT 110 (593)
T ss_dssp HHHHHTT---CCCEEEEEEE-CCCHHHH
T ss_pred HHHHHcC---CCceeEEEEe-ccCHHHh
Confidence 3332221 2578999998 5544333
No 351
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=26.87 E-value=39 Score=31.79 Aligned_cols=32 Identities=25% Similarity=0.340 Sum_probs=26.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
|+|+++-.|..| +..|..|+++|++|+++-..
T Consensus 1 ~dVvVIGaGiaG-----LsaA~~La~~G~~V~vlE~~ 32 (425)
T 3ka7_A 1 MKTVVIGAGLGG-----LLSAARLSKAGHEVEVFERL 32 (425)
T ss_dssp CEEEEECCBHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CcEEEECCCHHH-----HHHHHHHHhCCCceEEEeCC
Confidence 578888777666 78899999999999999654
No 352
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=26.86 E-value=41 Score=30.09 Aligned_cols=33 Identities=9% Similarity=0.246 Sum_probs=22.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVT 48 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 48 (468)
..|+|++.. +.|.+- ..|+++|.++||+|+.+.
T Consensus 2 ~~~~ilVtG--atG~iG--~~l~~~L~~~g~~v~~~~ 34 (321)
T 1e6u_A 2 AKQRVFIAG--HRGMVG--SAIRRQLEQRGDVELVLR 34 (321)
T ss_dssp CCEEEEEET--TTSHHH--HHHHHHHTTCTTEEEECC
T ss_pred CCCEEEEEC--CCcHHH--HHHHHHHHhCCCeEEEEe
Confidence 346777664 344443 357889999999988754
No 353
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=26.79 E-value=55 Score=28.25 Aligned_cols=33 Identities=15% Similarity=0.084 Sum_probs=23.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
||+++++.++.| +- .+++++|+++|++|.++.-
T Consensus 1 Mk~vlVTGas~g-IG--~~ia~~l~~~G~~V~~~~r 33 (254)
T 1zmt_A 1 MSTAIVTNVKHF-GG--MGSALRLSEAGHTVACHDE 33 (254)
T ss_dssp -CEEEESSTTST-TH--HHHHHHHHHTTCEEEECCG
T ss_pred CeEEEEeCCCch-HH--HHHHHHHHHCCCEEEEEeC
Confidence 567777776553 22 4789999999999887653
No 354
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=26.72 E-value=43 Score=32.19 Aligned_cols=32 Identities=22% Similarity=0.177 Sum_probs=26.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
|||.|+..|..| ..+|..|+++||+|+++...
T Consensus 3 mkI~VIG~G~vG-----~~lA~~La~~G~~V~~~D~~ 34 (450)
T 3gg2_A 3 LDIAVVGIGYVG-----LVSATCFAELGANVRCIDTD 34 (450)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSC
T ss_pred CEEEEECcCHHH-----HHHHHHHHhcCCEEEEEECC
Confidence 799999776555 56899999999999988654
No 355
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=26.70 E-value=55 Score=25.30 Aligned_cols=37 Identities=16% Similarity=0.196 Sum_probs=24.7
Q ss_pred cEEEEEcCCCccCHHHHH-HHHHHHHhCCCeEEEEeCC
Q 012194 14 VHCLVLSYPAQGHINPLL-QFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l-~La~~L~~rGh~Vt~~~~~ 50 (468)
|||+++-...+|+..-+. .+++.|.+.|++|.++...
T Consensus 1 mki~iiy~S~~Gnt~~~a~~i~~~l~~~g~~v~~~~~~ 38 (147)
T 1f4p_A 1 PKALIVYGSTTGNTEYTAETIARELADAGYEVDSRDAA 38 (147)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHHHHTCEEEEEEGG
T ss_pred CeEEEEEECCcCHHHHHHHHHHHHHHhcCCeeEEEehh
Confidence 577766555568765443 4566677789999877543
No 356
>3ld9_A DTMP kinase, thymidylate kinase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 2.15A {Ehrlichia chaffeensis}
Probab=26.69 E-value=42 Score=28.66 Aligned_cols=48 Identities=15% Similarity=0.163 Sum_probs=33.0
Q ss_pred CchhhhhhhcCCCcEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEe
Q 012194 1 MENIEKKAASCRLVHCLVLSYPAQGHINPLLQFAKRLDH-KGLKVTLVT 48 (468)
Q Consensus 1 ~~~~~~~~~~~~~~~il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~ 48 (468)
|-++|.-+...+.+-|+|....+.|--.-.-.|++.|.. +|++|.+.+
T Consensus 9 ~~~~~~~~~~~~~~~i~~~G~~g~GKst~~~~l~~~l~~~~g~~v~~~t 57 (223)
T 3ld9_A 9 MGTLEAQTQGPGSMFITFEGIDGSGKTTQSHLLAEYLSEIYGVNNVVLT 57 (223)
T ss_dssp ----------CCCEEEEEECSTTSSHHHHHHHHHHHHHHHHCGGGEEEE
T ss_pred cccccccccCCCCeEEEEECCCCCCHHHHHHHHHHHHhhccCceeeEee
Confidence 344555555566777888888888999999999999999 999998844
No 357
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=26.33 E-value=33 Score=30.90 Aligned_cols=33 Identities=21% Similarity=0.209 Sum_probs=26.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
..|||.|+..|..|. .+|+.|.++||+|+++..
T Consensus 8 ~~~~IgiIG~G~mG~-----~~A~~l~~~G~~V~~~dr 40 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGT-----IMAQVLLKQGKRVAIWNR 40 (306)
T ss_dssp CSCSEEEECCSHHHH-----HHHHHHHHTTCCEEEECS
T ss_pred CCCeEEEECCCHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 457999997776663 688999999999988743
No 358
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=26.28 E-value=39 Score=32.82 Aligned_cols=34 Identities=9% Similarity=0.185 Sum_probs=27.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
+..|+|.|+..|..| .++|..|+++||+|+++..
T Consensus 2 ~~~~kIgiIGlG~MG-----~~lA~~L~~~G~~V~v~dr 35 (484)
T 4gwg_A 2 NAQADIALIGLAVMG-----QNLILNMNDHGFVVCAFNR 35 (484)
T ss_dssp -CCBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCCEEEEEChhHHH-----HHHHHHHHHCCCEEEEEeC
Confidence 356899999887666 4679999999999998754
No 359
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=26.23 E-value=39 Score=32.67 Aligned_cols=34 Identities=15% Similarity=0.250 Sum_probs=26.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
|.+|||.|+..|..| ..+|..|.++||+|+++..
T Consensus 3 m~~~~IgvIG~G~mG-----~~lA~~L~~~G~~V~v~dr 36 (474)
T 2iz1_A 3 MAQANFGVVGMAVMG-----KNLALNVESRGYTVAIYNR 36 (474)
T ss_dssp CTTBSEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CCCCcEEEEeeHHHH-----HHHHHHHHhCCCEEEEEcC
Confidence 345799999877766 4578889999999988764
No 360
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=26.17 E-value=60 Score=27.17 Aligned_cols=33 Identities=9% Similarity=0.067 Sum_probs=27.1
Q ss_pred EEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEE
Q 012194 15 HCLVLSY-PAQGHINPLLQFAKRLDHKGLKVTLV 47 (468)
Q Consensus 15 ~il~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~ 47 (468)
.|++.+. |+-|-..-...||..|+++|++|.++
T Consensus 3 ~I~v~s~kgGvGKTt~a~nLa~~la~~G~rVll~ 36 (224)
T 1byi_A 3 RYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGY 36 (224)
T ss_dssp EEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEE
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE
Confidence 3445443 56799999999999999999999985
No 361
>2qx0_A 7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase; 3-layered alpha-BATA-alpha fold, homodimer, ternary complex, transferase; HET: APC PH2; 1.80A {Yersinia pestis}
Probab=26.10 E-value=1.2e+02 Score=24.15 Aligned_cols=29 Identities=17% Similarity=0.319 Sum_probs=25.0
Q ss_pred eEEEEecCcCCCCHHHHHHHHHHHHhCCC
Q 012194 282 VVYVSFGSYAPLKVEEMEELAWGLKATNQ 310 (468)
Q Consensus 282 ~I~is~Gs~~~~~~~~~~~~~~a~~~~~~ 310 (468)
.+|+++||....+.+.++..+..+.+.+.
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~~ 31 (159)
T 2qx0_A 3 RVYIALGSNLAMPLQQVSAAREALAHLPR 31 (159)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHTCTT
T ss_pred EEEEEEeCchhhHHHHHHHHHHHHhcCCC
Confidence 58999999998888889999999988643
No 362
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=26.09 E-value=85 Score=28.62 Aligned_cols=72 Identities=8% Similarity=0.046 Sum_probs=48.2
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEEeecchHHHhcccCcceeeecCCcchHHHHHH--c
Q 012194 294 KVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQLEVLAHEAAGCFLTHCGWNSTMEALS--L 371 (468)
Q Consensus 294 ~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~I~HgG~~s~~Eal~--~ 371 (468)
+.+....+.+++.+...+.||.+.+.... .++.++++...|-+++.. ||=+....+++-|++ .
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~-------------~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~al~~~~ 127 (331)
T 4e5s_A 63 ISSRVQDLHEAFRDPNVKAILTTLGGYNS-------------NGLLKYLDYDLIRENPKF--FCGYSDITALNNAIYTKT 127 (331)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSCG-------------GGGGGGCCHHHHHTSCCE--EEECGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccccH-------------HHHHhhcChhHHHhCCeE--EEEecchHHHHHHHHHhh
Confidence 45678889999999999999998664221 234455555555555655 777777777777776 4
Q ss_pred CCceeeccc
Q 012194 372 GVPMVAMPQ 380 (468)
Q Consensus 372 GvP~l~~P~ 380 (468)
|++.+-=|.
T Consensus 128 G~~t~hGp~ 136 (331)
T 4e5s_A 128 GLVTYSGPH 136 (331)
T ss_dssp CBCEEECCC
T ss_pred CCcEEEccc
Confidence 776655443
No 363
>1f9y_A HPPK, protein (6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase); pyrophosphoryl transfer, catalytic mechanism, folate, ternary complex; HET: APC HHR; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1eqm_A* 1hka_A 1q0n_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 3h4a_A* 3ip0_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A ...
Probab=26.06 E-value=94 Score=24.84 Aligned_cols=28 Identities=21% Similarity=0.306 Sum_probs=23.7
Q ss_pred eEEEEecCcCCCCHHHHHHHHHHHHhCC
Q 012194 282 VVYVSFGSYAPLKVEEMEELAWGLKATN 309 (468)
Q Consensus 282 ~I~is~Gs~~~~~~~~~~~~~~a~~~~~ 309 (468)
.+|+++||....+...++..++++.+.+
T Consensus 2 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 1f9y_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 5899999998777788888888888764
No 364
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=25.86 E-value=59 Score=28.45 Aligned_cols=33 Identities=12% Similarity=0.130 Sum_probs=25.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
|||++.. + |.+-. .|+++|.++||+|+.++-..
T Consensus 6 ~~ilVtG--a-G~iG~--~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFG--H-GYTAR--VLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEET--C-CHHHH--HHHHHHGGGTCEEEEEESCG
T ss_pred CcEEEEC--C-cHHHH--HHHHHHHHCCCEEEEEEcCh
Confidence 6888774 4 65543 57899999999999987543
No 365
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=25.84 E-value=91 Score=29.69 Aligned_cols=40 Identities=18% Similarity=0.219 Sum_probs=33.1
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeCCcccc
Q 012194 15 HCLVLSYPAQGHINPLLQFAKRLDH-KGLKVTLVTTYFISK 54 (468)
Q Consensus 15 ~il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~~~~~ 54 (468)
=+++...++.|-..=++.+|...+. .|..|.|++.+...+
T Consensus 202 l~ii~G~pg~GKT~lal~ia~~~a~~~g~~vl~~slE~~~~ 242 (444)
T 2q6t_A 202 LNIIAARPAMGKTAFALTIAQNAALKEGVGVGIYSLEMPAA 242 (444)
T ss_dssp EEEEEECTTSCHHHHHHHHHHHHHHTTCCCEEEEESSSCHH
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHhCCCeEEEEECCCCHH
Confidence 4667788888999999999999886 599999999876543
No 366
>2v4n_A Multifunctional protein SUR E; hydrolase, surviVal protein, stationary phase, phosph mononucleotidase, divalent metal ION; 1.7A {Salmonella typhimurium} PDB: 2v4o_A
Probab=25.84 E-value=91 Score=27.18 Aligned_cols=112 Identities=13% Similarity=0.036 Sum_probs=62.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEEcCCCCCCCCCCcc-ccHHHHH
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEAISDGYDQGGSAQA-ESIEAYL 91 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~~~~~~~~~~~~-~~~~~~~ 91 (468)
.||||+.---+. |---+.+|+++|.+.| +|+++.+...+.-.-.+. .....+++..+.. . .+... .++..-.
T Consensus 1 ~M~ILlTNDDGi-~apGi~aL~~~L~~~g-~V~VVAP~~~~Sg~g~ai-Tl~~Pl~~~~~~~---~-~~~v~~GTPaDCV 73 (254)
T 2v4n_A 1 SMRILLSNDDGV-HAPGIQTLAKALREFA-DVQVVAPDRNRSGASNSL-TLESSLRTFTFDN---G-DIAVQMGTPTDCV 73 (254)
T ss_dssp CCEEEEECSSCT-TCHHHHHHHHHHTTTS-EEEEEEESSCCTTCTTCC-CCSSCCEEEECTT---S-CEEEETCCHHHHH
T ss_pred CCeEEEEcCCCC-CCHHHHHHHHHHHhCC-cEEEEeeCCCCcCccCCc-CCCCCeEEEEeCC---C-CeEECCCCHHHHH
Confidence 378887665544 3344778999998876 999999887665443221 1122355555421 1 12223 3333222
Q ss_pred HHHHHhchHHHHHHHHHhcCCCCCccEEEeCC----------Ccch---HHHHHHHcCCceEEEcc
Q 012194 92 EKFWQIGPRSLCELVEKMNGSVVPVDCIVYDS----------FLPW---ALDVAKKFGLVGAAFLT 144 (468)
Q Consensus 92 ~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~----------~~~~---~~~~A~~lgiP~i~~~~ 144 (468)
. -.+..+.. .+||+||... ++.+ |+.-|..+|||.|.+|.
T Consensus 74 ~-----------lal~~ll~--~~PDLVvSGIN~G~Nlg~dv~ySGTVgAA~Ea~~~GiPaIA~S~ 126 (254)
T 2v4n_A 74 Y-----------LGVNALMR--PRPDIVVSGINAGPNLGDDVIYSGTVAAAMEGRHLGFPALAVSL 126 (254)
T ss_dssp H-----------HHHHTTSS--SCCSEEEEEEEESCCCGGGGGGCHHHHHHHTTTTSSSCEEEEEE
T ss_pred H-----------HHHhhccC--CCCCEeeeCCcCCCCCCCCeeccHHHHHHHHHHhcCCCeEEEec
Confidence 2 22222332 2469999643 3333 33444669999999864
No 367
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=25.77 E-value=55 Score=28.48 Aligned_cols=33 Identities=21% Similarity=0.216 Sum_probs=24.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 15 HCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 15 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
|+++++.++.| + =.++|++|+++|++|.++.-.
T Consensus 28 k~vlVTGas~g-I--G~aia~~l~~~G~~V~~~~r~ 60 (260)
T 3gem_A 28 APILITGASQR-V--GLHCALRLLEHGHRVIISYRT 60 (260)
T ss_dssp CCEEESSTTSH-H--HHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 56777776654 2 257899999999999988754
No 368
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=25.76 E-value=97 Score=25.84 Aligned_cols=38 Identities=8% Similarity=0.028 Sum_probs=27.3
Q ss_pred CCcEEEEEcCCCccC----HHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 12 RLVHCLVLSYPAQGH----INPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 12 ~~~~il~~~~~~~GH----~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
..++|.+++... +. ..-...|++.|+++|+.|.+-..+
T Consensus 21 ~~~~v~Vfggs~-~~~~~~~~~A~~lg~~La~~g~~lV~GGG~ 62 (199)
T 3qua_A 21 RQWAVCVYCASG-PTHPELLELAAEVGSSIAARGWTLVSGGGN 62 (199)
T ss_dssp CCCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCBC
T ss_pred CCCEEEEEECCC-CCCHHHHHHHHHHHHHHHHCCCEEEECCCc
Confidence 346899887665 33 345578889999999998776554
No 369
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=25.60 E-value=43 Score=27.18 Aligned_cols=34 Identities=15% Similarity=0.083 Sum_probs=25.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCC
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHK-GLKVTLVTTY 50 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~ 50 (468)
..+||+++..|..| ..+++.|.++ ||+|+++...
T Consensus 38 ~~~~v~IiG~G~~G-----~~~a~~L~~~~g~~V~vid~~ 72 (183)
T 3c85_A 38 GHAQVLILGMGRIG-----TGAYDELRARYGKISLGIEIR 72 (183)
T ss_dssp TTCSEEEECCSHHH-----HHHHHHHHHHHCSCEEEEESC
T ss_pred CCCcEEEECCCHHH-----HHHHHHHHhccCCeEEEEECC
Confidence 35789988654434 4568899998 9999988754
No 370
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=25.52 E-value=63 Score=28.11 Aligned_cols=33 Identities=18% Similarity=0.096 Sum_probs=24.7
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 15 HCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 15 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
|+++++.++.| -=.+++++|+++|++|.++.-.
T Consensus 9 k~~lVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 41 (265)
T 3lf2_A 9 AVAVVTGGSSG---IGLATVELLLEAGAAVAFCARD 41 (265)
T ss_dssp CEEEEETCSSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCCh---HHHHHHHHHHHCCCEEEEEeCC
Confidence 67777777654 2357899999999999887643
No 371
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=25.40 E-value=95 Score=26.27 Aligned_cols=37 Identities=8% Similarity=0.028 Sum_probs=28.3
Q ss_pred cEEEEEcCCCccC--HHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 14 VHCLVLSYPAQGH--INPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 14 ~~il~~~~~~~GH--~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
..++++.+|..|+ ..-+..+++.|.++|+.|..+-..
T Consensus 46 ~p~vv~~HG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~ 84 (270)
T 3pfb_A 46 YDMAIIFHGFTANRNTSLLREIANSLRDENIASVRFDFN 84 (270)
T ss_dssp EEEEEEECCTTCCTTCHHHHHHHHHHHHTTCEEEEECCT
T ss_pred CCEEEEEcCCCCCccccHHHHHHHHHHhCCcEEEEEccc
Confidence 4566677776766 666889999999999998876543
No 372
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=25.39 E-value=53 Score=29.53 Aligned_cols=33 Identities=18% Similarity=0.065 Sum_probs=25.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
..|||.|+..|..|. .+|+.|.+.||+|+++..
T Consensus 29 ~~~~I~iIG~G~mG~-----~~a~~l~~~g~~V~~~~~ 61 (316)
T 2uyy_A 29 TDKKIGFLGLGLMGS-----GIVSNLLKMGHTVTVWNR 61 (316)
T ss_dssp CSSCEEEECCSHHHH-----HHHHHHHHTTCCEEEECS
T ss_pred CCCeEEEEcccHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 358999998776664 578889999999987754
No 373
>2ixd_A LMBE-related protein; hexamer, deacetylase, rossman fold, zinc-dependent metalloenzyme, hydrolase; 1.8A {Bacillus cereus}
Probab=25.34 E-value=68 Score=27.71 Aligned_cols=38 Identities=13% Similarity=0.118 Sum_probs=22.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
.+++||++...-.--..-+=.....++++|++|++++-
T Consensus 2 ~~~~vL~v~aHPDDe~l~~Ggtia~~~~~G~~V~vv~l 39 (242)
T 2ixd_A 2 SGLHILAFGAHADDVEIGMAGTIAKYTKQGYEVGICDL 39 (242)
T ss_dssp CCCSEEEEESSTTHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCccEEEEEeCCChHHHhHHHHHHHHHHCCCeEEEEEE
Confidence 44677765443333344444555667779999887653
No 374
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=25.34 E-value=71 Score=30.57 Aligned_cols=33 Identities=27% Similarity=0.225 Sum_probs=26.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
+.+||+|+..|..| +++|+.|+++||+|+..=.
T Consensus 8 ~~k~v~viG~G~sG-----~s~A~~l~~~G~~V~~~D~ 40 (451)
T 3lk7_A 8 ENKKVLVLGLARSG-----EAAARLLAKLGAIVTVNDG 40 (451)
T ss_dssp TTCEEEEECCTTTH-----HHHHHHHHHTTCEEEEEES
T ss_pred CCCEEEEEeeCHHH-----HHHHHHHHhCCCEEEEEeC
Confidence 45799999987766 3469999999999998754
No 375
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=25.28 E-value=45 Score=29.55 Aligned_cols=31 Identities=23% Similarity=0.223 Sum_probs=25.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
|||.|+..|..|. .+|+.|.++||+|+++..
T Consensus 2 ~~I~iiG~G~mG~-----~~a~~l~~~G~~V~~~dr 32 (287)
T 3pdu_A 2 TTYGFLGLGIMGG-----PMAANLVRAGFDVTVWNR 32 (287)
T ss_dssp CCEEEECCSTTHH-----HHHHHHHHHTCCEEEECS
T ss_pred CeEEEEccCHHHH-----HHHHHHHHCCCeEEEEcC
Confidence 5899998777774 578899999999998754
No 376
>2hy5_B Intracellular sulfur oxidation protein DSRF; DSRE, DSRF, sulfur, structural genomics, PSI, protein initiative, berkeley structural genomics center, BSGC, TRAN; 1.72A {Allochromatium vinosum} SCOP: c.114.1.1 PDB: 2hyb_B
Probab=25.25 E-value=1.5e+02 Score=22.82 Aligned_cols=44 Identities=14% Similarity=-0.062 Sum_probs=32.7
Q ss_pred EEEE-EcCCCccCHHH--HHHHHHHHHhCCCeEEEEeCCcccccccc
Q 012194 15 HCLV-LSYPAQGHINP--LLQFAKRLDHKGLKVTLVTTYFISKSLHR 58 (468)
Q Consensus 15 ~il~-~~~~~~GH~~p--~l~La~~L~~rGh~Vt~~~~~~~~~~~~~ 58 (468)
|+++ ++.+-+|+... .+.+|..+...||+|.++-..+..-...+
T Consensus 7 k~~ivv~~~P~g~~~~~~al~~a~a~~a~~~~v~Vff~~DGV~~~~~ 53 (136)
T 2hy5_B 7 KFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVLFLDDGVYQLTR 53 (136)
T ss_dssp EEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEEECGGGGGGGBS
T ss_pred EEEEEEeCCCCCcHHHHHHHHHHHHHHhCCCCEEEEEEhHHHHHHhc
Confidence 4664 56666777554 57779999999999999888877766653
No 377
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=25.25 E-value=46 Score=31.28 Aligned_cols=32 Identities=16% Similarity=0.240 Sum_probs=26.0
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
|+|+++-.|..| +..|..|+++|++|+++-..
T Consensus 1 ~dVvVIGaGiaG-----LsaA~~La~~G~~V~vlE~~ 32 (421)
T 3nrn_A 1 MRAVVVGAGLGG-----LLAGAFLARNGHEIIVLEKS 32 (421)
T ss_dssp CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CcEEEECCCHHH-----HHHHHHHHHCCCeEEEEeCC
Confidence 578888777666 78899999999999998653
No 378
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=25.20 E-value=43 Score=29.29 Aligned_cols=32 Identities=16% Similarity=0.192 Sum_probs=24.7
Q ss_pred EEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012194 17 LVLSYPAQGHINPLLQFAKRLDHKGLKVTLVT 48 (468)
Q Consensus 17 l~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 48 (468)
+++.+|..|+-.-+..+++.|+++|++|..+-
T Consensus 54 VlllHG~~~s~~~~~~la~~La~~Gy~Via~D 85 (281)
T 4fbl_A 54 VLVSHGFTGSPQSMRFLAEGFARAGYTVATPR 85 (281)
T ss_dssp EEEECCTTCCGGGGHHHHHHHHHTTCEEEECC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCEEEEEC
Confidence 34557767777778889999999999987543
No 379
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=25.14 E-value=35 Score=29.99 Aligned_cols=44 Identities=9% Similarity=0.032 Sum_probs=37.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHH--------HHhC-CCeEEEEeCCccccc
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKR--------LDHK-GLKVTLVTTYFISKS 55 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~--------L~~r-Gh~Vt~~~~~~~~~~ 55 (468)
++.+|++.+.++-.|-....-++.- |.++ |++|.+++.....+.
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~ 171 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANED 171 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHH
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHH
Confidence 4679999999999999999888877 9999 999999887554433
No 380
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=25.09 E-value=98 Score=26.11 Aligned_cols=35 Identities=11% Similarity=0.168 Sum_probs=27.2
Q ss_pred cEEEEEcCCCccC--HHHHHHHHHHHHhCCCeEEEEe
Q 012194 14 VHCLVLSYPAQGH--INPLLQFAKRLDHKGLKVTLVT 48 (468)
Q Consensus 14 ~~il~~~~~~~GH--~~p~l~La~~L~~rGh~Vt~~~ 48 (468)
...+++.+|..|+ ..-+..+++.|.++|++|..+-
T Consensus 27 ~p~vvl~HG~~~~~~~~~~~~~~~~l~~~g~~vi~~D 63 (251)
T 2wtm_A 27 CPLCIIIHGFTGHSEERHIVAVQETLNEIGVATLRAD 63 (251)
T ss_dssp EEEEEEECCTTCCTTSHHHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEEcCCCcccccccHHHHHHHHHHCCCEEEEec
Confidence 3466777777777 6777889999999999987654
No 381
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=25.05 E-value=1.4e+02 Score=22.67 Aligned_cols=48 Identities=8% Similarity=0.045 Sum_probs=30.5
Q ss_pred cCCceeecccccchhHHHHHHHhhhc-ceeEecCCCCCccCHHHHHHHHHHHhcC
Q 012194 371 LGVPMVAMPQWSDQSTNGKYIMDVWK-MGLKVPADEKGIVRREAIAHCISEILEG 424 (468)
Q Consensus 371 ~GvP~l~~P~~~DQ~~na~~l~~~~g-~G~~l~~~~~~~~~~~~l~~~i~~ll~~ 424 (468)
..+|+|++--..+ ........+. | +--.+.+ .++.+.|..+|..++..
T Consensus 78 ~~~~ii~ls~~~~-~~~~~~~~~~-g~~~~~l~k----P~~~~~L~~~i~~~~~~ 126 (154)
T 2rjn_A 78 PDIERVVISGYAD-AQATIDAVNR-GKISRFLLK----PWEDEDVFKVVEKGLQL 126 (154)
T ss_dssp TTSEEEEEECGGG-HHHHHHHHHT-TCCSEEEES----SCCHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCC-HHHHHHHHhc-cchheeeeC----CCCHHHHHHHHHHHHHH
Confidence 3688877754444 3344444455 5 4333332 56999999999999865
No 382
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=24.91 E-value=69 Score=28.88 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=22.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
.|+|++.... |-+- ..|+++|.++||+|+.+.-.
T Consensus 21 ~~~vlVTGat--G~iG--~~l~~~L~~~g~~V~~~~r~ 54 (333)
T 2q1w_A 21 MKKVFITGIC--GQIG--SHIAELLLERGDKVVGIDNF 54 (333)
T ss_dssp CCEEEEETTT--SHHH--HHHHHHHHHTTCEEEEEECC
T ss_pred CCEEEEeCCc--cHHH--HHHHHHHHHCCCEEEEEECC
Confidence 4566665333 3222 46788999999999988753
No 383
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=24.89 E-value=61 Score=28.70 Aligned_cols=33 Identities=21% Similarity=0.156 Sum_probs=22.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
++|+++.. .|.+- ..++++|.++||+|+.++-.
T Consensus 5 ~~ilVtGa--tG~iG--~~l~~~L~~~g~~V~~l~R~ 37 (308)
T 1qyc_A 5 SRILLIGA--TGYIG--RHVAKASLDLGHPTFLLVRE 37 (308)
T ss_dssp CCEEEEST--TSTTH--HHHHHHHHHTTCCEEEECCC
T ss_pred CEEEEEcC--CcHHH--HHHHHHHHhCCCCEEEEECC
Confidence 56666543 34333 35788999999999987754
No 384
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=24.85 E-value=55 Score=29.46 Aligned_cols=34 Identities=21% Similarity=0.215 Sum_probs=22.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCC--CeEEEEeC
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKG--LKVTLVTT 49 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rG--h~Vt~~~~ 49 (468)
..|||++... .|-+- ..|+++|.++| |+|+.+.-
T Consensus 2 ~~m~vlVTGa--tG~iG--~~l~~~L~~~g~~~~V~~~~r 37 (336)
T 2hun_A 2 HSMKLLVTGG--MGFIG--SNFIRYILEKHPDWEVINIDK 37 (336)
T ss_dssp -CCEEEEETT--TSHHH--HHHHHHHHHHCTTCEEEEEEC
T ss_pred CCCeEEEECC--CchHH--HHHHHHHHHhCCCCEEEEEec
Confidence 3478766543 33332 46788898886 99998764
No 385
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=24.82 E-value=77 Score=27.66 Aligned_cols=33 Identities=21% Similarity=0.187 Sum_probs=24.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
-|+++++.++.| + =.++|++|+++|++|.+...
T Consensus 28 ~k~vlVTGas~g-I--G~aia~~la~~G~~V~~~~~ 60 (269)
T 4dmm_A 28 DRIALVTGASRG-I--GRAIALELAAAGAKVAVNYA 60 (269)
T ss_dssp TCEEEETTCSSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEECCCCH-H--HHHHHHHHHHCCCEEEEEeC
Confidence 367788877653 2 24789999999999988765
No 386
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=24.79 E-value=1.5e+02 Score=23.65 Aligned_cols=86 Identities=9% Similarity=-0.018 Sum_probs=50.9
Q ss_pred CceEEEEecCcCCCC-HHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEEeecchHHHhcccCcceee-
Q 012194 280 GSVVYVSFGSYAPLK-VEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQLEVLAHEAAGCFL- 357 (468)
Q Consensus 280 ~~~I~is~Gs~~~~~-~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~I- 357 (468)
++.+|++..-..... .+..+++.+.|++.|..+++ +-. ...+ ... .=|--....+..|++-+.+
T Consensus 10 ~~~~y~a~~~F~~~e~~~~~~~l~~~l~~~G~~v~~--P~~--~~~~--~~~--------~i~~~d~~~i~~aD~vVA~l 75 (161)
T 2f62_A 10 RKIYIAGPAVFNPDMGASYYNKVRELLKKENVMPLI--PTD--NEAT--EAL--------DIRQKNIQMIKDCDAVIADL 75 (161)
T ss_dssp CEEEEESGGGGSTTTTHHHHHHHHHHHHTTTCEEEC--TTT--TCCS--SHH--------HHHHHHHHHHHHCSEEEEEC
T ss_pred hceEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEC--CCc--cCcc--hHH--------HHHHHHHHHHHhCCEEEEEe
Confidence 346666544444556 78888899999988876432 111 1010 000 0011224778889983333
Q ss_pred e-----cCCcchHHHH---HHcCCceeecc
Q 012194 358 T-----HCGWNSTMEA---LSLGVPMVAMP 379 (468)
Q Consensus 358 ~-----HgG~~s~~Ea---l~~GvP~l~~P 379 (468)
+ .--.||..|. ...|+|++++-
T Consensus 76 dpf~g~~~D~GTafEiGyA~AlgKPVi~l~ 105 (161)
T 2f62_A 76 SPFRGHEPDCGTAFEVGCAAALNKMVLTFT 105 (161)
T ss_dssp CCCSSSSCCHHHHHHHHHHHHTTCEEEEEC
T ss_pred cCCCCCCCCCcHHHHHHHHHHCCCEEEEEE
Confidence 1 2457899985 77899999874
No 387
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=24.76 E-value=53 Score=29.17 Aligned_cols=32 Identities=9% Similarity=0.035 Sum_probs=26.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
.+|+++-.|..| +..|..|+++|++|+++-..
T Consensus 16 ~~vvIIG~G~aG-----l~aA~~l~~~g~~v~lie~~ 47 (323)
T 3f8d_A 16 FDVIIVGLGPAA-----YGAALYSARYMLKTLVIGET 47 (323)
T ss_dssp EEEEEECCSHHH-----HHHHHHHHHTTCCEEEEESS
T ss_pred cCEEEECccHHH-----HHHHHHHHHCCCcEEEEecc
Confidence 588888877666 67889999999999999864
No 388
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID}
Probab=24.75 E-value=63 Score=31.78 Aligned_cols=41 Identities=20% Similarity=0.202 Sum_probs=25.6
Q ss_pred cCCCcEEEEEcCC-------CccCHHHHHH---HHHHHHhCCCeEEEEeCC
Q 012194 10 SCRLVHCLVLSYP-------AQGHINPLLQ---FAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 10 ~~~~~~il~~~~~-------~~GH~~p~l~---La~~L~~rGh~Vt~~~~~ 50 (468)
+|++.++.+.+.. .-||+...+. +++.|..+||+|.+++.-
T Consensus 21 ~~~~~~~~i~~p~pypng~lHiGH~r~~v~~D~laR~lr~~G~~V~~~~g~ 71 (536)
T 4dlp_A 21 SMSREKYYITTAIAYPNGKPHIGHAYELIATDAMARFQRLNGMDVYFLTGT 71 (536)
T ss_dssp ---CCEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred cCCCCCEEEeCCCCCCCCCcCcchhHHHHHHHHHHHHHHhcCCcEEEecCc
Confidence 3555566653321 2388877653 678888899999997754
No 389
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=24.75 E-value=48 Score=31.97 Aligned_cols=35 Identities=29% Similarity=0.230 Sum_probs=27.8
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
.+.++|+++..|..| +..|..|+++|++|+++-..
T Consensus 9 ~~~~~v~IIGaG~aG-----l~aA~~L~~~g~~v~v~E~~ 43 (489)
T 2jae_A 9 KGSHSVVVLGGGPAG-----LCSAFELQKAGYKVTVLEAR 43 (489)
T ss_dssp CSCCEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred cCCCCEEEECCCHHH-----HHHHHHHHHCCCCEEEEecc
Confidence 346799998888655 67889999999999998643
No 390
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=24.74 E-value=85 Score=26.67 Aligned_cols=33 Identities=15% Similarity=0.204 Sum_probs=21.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
||.++++.++ |-+- .+++++|.++||+|+.+.-
T Consensus 1 Mk~vlVtGas-g~iG--~~l~~~L~~~g~~V~~~~r 33 (255)
T 2dkn_A 1 MSVIAITGSA-SGIG--AALKELLARAGHTVIGIDR 33 (255)
T ss_dssp -CEEEEETTT-SHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEeCCC-cHHH--HHHHHHHHhCCCEEEEEeC
Confidence 4445555443 3332 4678999999999998764
No 391
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=24.74 E-value=1.3e+02 Score=23.71 Aligned_cols=39 Identities=15% Similarity=-0.123 Sum_probs=28.1
Q ss_pred CcEEEEEcCCCcc---CHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 13 LVHCLVLSYPAQG---HINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 13 ~~~il~~~~~~~G---H~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
...+++++.|+.| .-.-+..+.+.|.+.++++.+++...
T Consensus 20 ~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~ 61 (170)
T 2o6l_A 20 ENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGN 61 (170)
T ss_dssp TTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSS
T ss_pred CCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCc
Confidence 3456778888776 44556678888887788888887643
No 392
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=24.72 E-value=25 Score=30.66 Aligned_cols=33 Identities=6% Similarity=0.054 Sum_probs=25.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCC----CeEEEEeC
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKG----LKVTLVTT 49 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rG----h~Vt~~~~ 49 (468)
+.|||.|+..|..|. .+++.|.++| |+|+++..
T Consensus 3 ~~m~i~iiG~G~mG~-----~~a~~l~~~g~~~~~~v~~~~~ 39 (262)
T 2rcy_A 3 ENIKLGFMGLGQMGS-----ALAHGIANANIIKKENLFYYGP 39 (262)
T ss_dssp SSSCEEEECCSHHHH-----HHHHHHHHHTSSCGGGEEEECS
T ss_pred CCCEEEEECcCHHHH-----HHHHHHHHCCCCCCCeEEEEeC
Confidence 457999998876664 3678888889 89987753
No 393
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=24.69 E-value=26 Score=31.69 Aligned_cols=32 Identities=13% Similarity=-0.037 Sum_probs=25.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
.++|+++-.|..| +.+|..|+++|++|+++-.
T Consensus 8 ~~~vvIIG~G~aG-----l~~A~~l~~~g~~v~lie~ 39 (333)
T 1vdc_A 8 NTRLCIVGSGPAA-----HTAAIYAARAELKPLLFEG 39 (333)
T ss_dssp EEEEEEECCSHHH-----HHHHHHHHHTTCCCEEECC
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCeEEEEec
Confidence 4688888777555 6778889999999999875
No 394
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=24.65 E-value=91 Score=22.96 Aligned_cols=37 Identities=14% Similarity=0.191 Sum_probs=28.8
Q ss_pred CCcEEEEEcCCCccCHHHHH-HHHHHHHhCCCe-EEEEe
Q 012194 12 RLVHCLVLSYPAQGHINPLL-QFAKRLDHKGLK-VTLVT 48 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l-~La~~L~~rGh~-Vt~~~ 48 (468)
+.+||+++|..+.|.-.-.. .|-+.+.++|.+ +.+-.
T Consensus 17 ~~~kIlvvC~sG~gTS~m~~~kl~~~~~~~gi~~~~i~~ 55 (110)
T 3czc_A 17 SMVKVLTACGNGMGSSMVIKMKVENALRQLGVSDIESAS 55 (110)
T ss_dssp -CEEEEEECCCCHHHHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 35789999999999888777 777788889987 65433
No 395
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=24.63 E-value=90 Score=26.60 Aligned_cols=37 Identities=16% Similarity=0.100 Sum_probs=23.6
Q ss_pred CcEEEEEcCCCc-cCHHHH--HHHHHHHHhCCCeEEEEeC
Q 012194 13 LVHCLVLSYPAQ-GHINPL--LQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 13 ~~~il~~~~~~~-GH~~p~--l~La~~L~~rGh~Vt~~~~ 49 (468)
.|||+++....+ +-.+-. -.+++.|.++||+|.++--
T Consensus 1 ~mkiLiI~gspr~~S~t~~l~~~~~~~l~~~g~ev~~~dL 40 (228)
T 3tem_A 1 GKKVLIVYAHQEPKSFNGSLKNVAVDELSRQGCTVTVSDL 40 (228)
T ss_dssp CCEEEEEECCSCTTSHHHHHHHHHHHHHHHHTCEEEEEET
T ss_pred CCEEEEEEeCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEh
Confidence 378986554444 433332 2456777778999998764
No 396
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=24.55 E-value=64 Score=29.57 Aligned_cols=34 Identities=15% Similarity=0.079 Sum_probs=23.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
.|+|++.. +.|.+- ..|+++|.++||+|+.++-.
T Consensus 5 ~~~ilVtG--atG~iG--~~l~~~L~~~g~~V~~~~R~ 38 (352)
T 1xgk_A 5 KKTIAVVG--ATGRQG--ASLIRVAAAVGHHVRAQVHS 38 (352)
T ss_dssp CCCEEEES--TTSHHH--HHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEEC--CCCHHH--HHHHHHHHhCCCEEEEEECC
Confidence 46777664 334443 35788899999999988754
No 397
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=24.40 E-value=76 Score=29.29 Aligned_cols=34 Identities=24% Similarity=0.243 Sum_probs=23.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
.|+|++... .|-+- ..|+++|.++||+|+.+.-.
T Consensus 29 ~~~vlVtGa--tG~iG--~~l~~~L~~~g~~V~~~~r~ 62 (379)
T 2c5a_A 29 NLKISITGA--GGFIA--SHIARRLKHEGHYVIASDWK 62 (379)
T ss_dssp CCEEEEETT--TSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCeEEEECC--ccHHH--HHHHHHHHHCCCeEEEEECC
Confidence 356666533 33332 46788999999999988753
No 398
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=24.37 E-value=1.1e+02 Score=22.19 Aligned_cols=40 Identities=20% Similarity=0.098 Sum_probs=27.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcccccc
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSL 56 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 56 (468)
+...|++++..+ ......++.|.+.||+|..+.+ .+.+..
T Consensus 54 ~~~~ivvyC~~G----~rs~~aa~~L~~~G~~v~~l~G-G~~~W~ 93 (108)
T 3gk5_A 54 RDKKYAVICAHG----NRSAAAVEFLSQLGLNIVDVEG-GIQSWI 93 (108)
T ss_dssp TTSCEEEECSSS----HHHHHHHHHHHTTTCCEEEETT-HHHHHH
T ss_pred CCCeEEEEcCCC----cHHHHHHHHHHHcCCCEEEEcC-cHHHHH
Confidence 345788998443 3456778999999998887754 333333
No 399
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=24.34 E-value=81 Score=31.06 Aligned_cols=29 Identities=21% Similarity=0.321 Sum_probs=23.8
Q ss_pred cccCcceeeecCCcc------hHHHHHHcCCceeecc
Q 012194 349 AHEAAGCFLTHCGWN------STMEALSLGVPMVAMP 379 (468)
Q Consensus 349 ~~~~~~~~I~HgG~~------s~~Eal~~GvP~l~~P 379 (468)
.++.+ +++|.|-| .+.||-+.++|+|++-
T Consensus 65 g~~~v--~~~TsGpG~~N~~~gi~~A~~~~vPvl~it 99 (549)
T 3eya_A 65 GELAV--CAGSCGPGNLHLINGLFDCHRNHVPVLAIA 99 (549)
T ss_dssp SSCEE--EEECTTHHHHTTHHHHHHHHHTTCCEEEEE
T ss_pred CCCEE--EEeCCCCcHhhhHHHHHHHHhhCCCEEEEe
Confidence 34566 99999976 7889999999999864
No 400
>3u7q_B Nitrogenase molybdenum-iron protein beta chain; multiple rossmann fold domains, reductase, nitrogen fixing, oxidoreductase; HET: HCA ICS 1CL CLF; 1.00A {Azotobacter vinelandii} SCOP: c.92.2.3 PDB: 1fp4_B* 1g21_B* 1g20_B* 1m1n_B* 1l5h_B* 1m1y_B* 1m34_B* 1n2c_B* 2afh_B* 2afi_B* 2afk_B* 2min_B* 3k1a_B* 3min_B*
Probab=24.33 E-value=5e+02 Score=25.24 Aligned_cols=35 Identities=11% Similarity=-0.001 Sum_probs=25.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
...||+++ |+-.-.+.|++.|.+.|.+|..+.+..
T Consensus 363 ~GKrvaI~-----gd~~~~~~la~fL~elGm~vv~v~~~~ 397 (523)
T 3u7q_B 363 HGKRFALW-----GDPDFVMGLVKFLLELGCEPVHILCHN 397 (523)
T ss_dssp TTCEEEEE-----CSHHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred CCCEEEEE-----CCchHHHHHHHHHHHcCCEEEEEEeCC
Confidence 35688887 334556788888989999999876553
No 401
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=24.30 E-value=63 Score=28.70 Aligned_cols=32 Identities=25% Similarity=0.400 Sum_probs=21.3
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
|+|++... .|-+- ..|+++|.++||+|+.+.-
T Consensus 1 m~vlVTGa--tG~iG--~~l~~~L~~~G~~V~~~~r 32 (311)
T 2p5y_A 1 MRVLVTGG--AGFIG--SHIVEDLLARGLEVAVLDN 32 (311)
T ss_dssp CEEEEETT--TSHHH--HHHHHHHHTTTCEEEEECC
T ss_pred CEEEEEeC--CcHHH--HHHHHHHHHCCCEEEEEEC
Confidence 56655433 33332 4678999999999988753
No 402
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=24.16 E-value=1.3e+02 Score=21.72 Aligned_cols=47 Identities=11% Similarity=0.088 Sum_probs=33.7
Q ss_pred cCCceeecccccchhHHHHHHHhhhcceeEecCCCCCccCHHHHHHHHHHHhcC
Q 012194 371 LGVPMVAMPQWSDQSTNGKYIMDVWKMGLKVPADEKGIVRREAIAHCISEILEG 424 (468)
Q Consensus 371 ~GvP~l~~P~~~DQ~~na~~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~ 424 (468)
..+|++++ ..+......+..+. |+--.+.+ .++.++|.+.++.++..
T Consensus 79 ~~~~ii~~--~~~~~~~~~~~~~~-g~~~~l~k----p~~~~~l~~~i~~~~~~ 125 (127)
T 2gkg_A 79 KNVPIVII--GNPDGFAQHRKLKA-HADEYVAK----PVDADQLVERAGALIGF 125 (127)
T ss_dssp TTSCEEEE--ECGGGHHHHHHSTT-CCSEEEES----SCCHHHHHHHHHHHHCC
T ss_pred cCCCEEEE--ecCCchhHHHHHHh-CcchheeC----CCCHHHHHHHHHHHHcC
Confidence 47899988 44555566666677 76444443 57999999999998865
No 403
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=24.10 E-value=70 Score=28.63 Aligned_cols=32 Identities=28% Similarity=0.344 Sum_probs=21.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
|+|++.... |-+- ..|+++|.++||+|+.+.-
T Consensus 2 ~~ilVtGat--G~iG--~~l~~~L~~~g~~V~~~~r 33 (330)
T 2c20_A 2 NSILICGGA--GYIG--SHAVKKLVDEGLSVVVVDN 33 (330)
T ss_dssp CEEEEETTT--SHHH--HHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCC--cHHH--HHHHHHHHhCCCEEEEEeC
Confidence 466655433 3332 5678899999999998764
No 404
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=24.10 E-value=83 Score=27.25 Aligned_cols=39 Identities=15% Similarity=0.117 Sum_probs=26.2
Q ss_pred CCCcEEEEEcCCCc--cCHHHHHH-HHHHHHhCCCeEEEEeC
Q 012194 11 CRLVHCLVLSYPAQ--GHINPLLQ-FAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 11 ~~~~~il~~~~~~~--GH~~p~l~-La~~L~~rGh~Vt~~~~ 49 (468)
+..|||+++....+ |.-.-++. +++.|.+.|++|.++--
T Consensus 32 ~~~mkIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL 73 (247)
T 2q62_A 32 THRPRILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDP 73 (247)
T ss_dssp CSCCEEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCC
T ss_pred CCCCeEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEh
Confidence 45689998776655 44444444 56667778999888753
No 405
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=24.09 E-value=82 Score=27.78 Aligned_cols=33 Identities=18% Similarity=0.319 Sum_probs=23.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 15 HCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 15 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
|+++++.++.| +- .+++++|+++|++|.++.-.
T Consensus 17 k~vlVTGas~g-IG--~~~a~~L~~~G~~V~~~~r~ 49 (291)
T 3rd5_A 17 RTVVITGANSG-LG--AVTARELARRGATVIMAVRD 49 (291)
T ss_dssp CEEEEECCSSH-HH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCCh-HH--HHHHHHHHHCCCEEEEEECC
Confidence 56666665542 22 58899999999999988754
No 406
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=24.04 E-value=63 Score=31.69 Aligned_cols=34 Identities=18% Similarity=0.011 Sum_probs=28.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
+.+||.|+..++.| |-.+|+.|+++|++|+..=.
T Consensus 18 ~~~~i~~iGiGg~G----ms~lA~~l~~~G~~V~~sD~ 51 (524)
T 3hn7_A 18 QGMHIHILGICGTF----MGSLALLARALGHTVTGSDA 51 (524)
T ss_dssp -CCEEEEETTTSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred cCCEEEEEEecHhh----HHHHHHHHHhCCCEEEEECC
Confidence 35799999999887 67899999999999998644
No 407
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=24.03 E-value=64 Score=26.83 Aligned_cols=35 Identities=23% Similarity=0.186 Sum_probs=28.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVT 48 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 48 (468)
.+.+++.+|..|+-.-+..+++.|.++|+.|..+-
T Consensus 22 ~~~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d 56 (251)
T 3dkr_A 22 DTGVVLLHAYTGSPNDMNFMARALQRSGYGVYVPL 56 (251)
T ss_dssp SEEEEEECCTTCCGGGGHHHHHHHHHTTCEEEECC
T ss_pred CceEEEeCCCCCCHHHHHHHHHHHHHCCCEEEecC
Confidence 45667778878888888999999999999886653
No 408
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=24.03 E-value=92 Score=27.25 Aligned_cols=32 Identities=19% Similarity=0.276 Sum_probs=24.2
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 15 HCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 15 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
|+++++.++.| -=.++|++|+++|++|.++.-
T Consensus 11 k~vlVTGas~g---IG~~ia~~l~~~G~~V~~~~~ 42 (287)
T 3pxx_A 11 KVVLVTGGARG---QGRSHAVKLAEEGADIILFDI 42 (287)
T ss_dssp CEEEEETTTSH---HHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCCCCh---HHHHHHHHHHHCCCeEEEEcc
Confidence 66777777653 225789999999999998764
No 409
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=23.89 E-value=1.1e+02 Score=25.29 Aligned_cols=63 Identities=17% Similarity=0.236 Sum_probs=38.3
Q ss_pred CcEEE-EEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccc--cccCCCC--CCCCeEEEEcCCC
Q 012194 13 LVHCL-VLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKS--LHRDSSS--SSASIALEAISDG 75 (468)
Q Consensus 13 ~~~il-~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~--~~~~~~~--~~~~i~f~~~~~~ 75 (468)
+.||+ |++.+...+-.....+++.|++.|++|.+++....... .++..+. ...+-+|..+|++
T Consensus 106 ~~riiil~~~~~~~~~~~~~~~a~~lk~~gi~v~~Ig~G~~~~~~~l~~la~~~n~~~~s~~~~~~~~ 173 (192)
T 2x5n_A 106 RQRIVAFVGSPIVEDEKNLIRLAKRMKKNNVAIDIIHIGELQNESALQHFIDAANSSDSCHLVSIPPS 173 (192)
T ss_dssp EEEEEEEECSCCSSCHHHHHHHHHHHHHTTEEEEEEEESCC---CHHHHHHHHHCSTTCCEEEEECCC
T ss_pred CceEEEEEECCCCCCchhHHHHHHHHHHCCCEEEEEEeCCCCccHHHHHHHHhccCCCceEEEEecCc
Confidence 34654 55555555677788999999999999998775432210 2221001 1346788888754
No 410
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=23.81 E-value=53 Score=29.39 Aligned_cols=34 Identities=6% Similarity=-0.008 Sum_probs=23.8
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
|+|+++ |+.|.+-. .++++|.++||+|+.++-..
T Consensus 5 ~~ilVt--GatG~iG~--~l~~~L~~~g~~V~~~~R~~ 38 (321)
T 3c1o_A 5 EKIIIY--GGTGYIGK--FMVRASLSFSHPTFIYARPL 38 (321)
T ss_dssp CCEEEE--TTTSTTHH--HHHHHHHHTTCCEEEEECCC
T ss_pred cEEEEE--cCCchhHH--HHHHHHHhCCCcEEEEECCc
Confidence 566665 34454433 57889999999999987643
No 411
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=23.78 E-value=68 Score=27.98 Aligned_cols=32 Identities=22% Similarity=0.296 Sum_probs=25.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 15 HCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 15 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
|++++|.++.| ==.++|+.|+++|.+|.+..-
T Consensus 10 KvalVTGas~G---IG~aia~~la~~Ga~Vvi~~~ 41 (255)
T 4g81_D 10 KTALVTGSARG---LGFAYAEGLAAAGARVILNDI 41 (255)
T ss_dssp CEEEETTCSSH---HHHHHHHHHHHTTCEEEECCS
T ss_pred CEEEEeCCCcH---HHHHHHHHHHHCCCEEEEEEC
Confidence 78999988876 235789999999999987654
No 412
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=23.64 E-value=2e+02 Score=20.61 Aligned_cols=41 Identities=10% Similarity=0.004 Sum_probs=26.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCccccccc
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSLH 57 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~ 57 (468)
+...|+++|.. |. .....++.|.+.|+++..+ ...+.....
T Consensus 55 ~~~~ivv~C~~--G~--rS~~aa~~L~~~G~~~~~l-~GG~~~W~~ 95 (103)
T 3iwh_A 55 KNEIYYIVCAG--GV--RSAKVVEYLEANGIDAVNV-EGGMHAWGD 95 (103)
T ss_dssp TTSEEEEECSS--SS--HHHHHHHHHHTTTCEEEEE-TTHHHHHCS
T ss_pred CCCeEEEECCC--CH--HHHHHHHHHHHcCCCEEEe-cChHHHHHH
Confidence 34578888854 32 3456688999999998754 334444433
No 413
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=23.62 E-value=76 Score=28.08 Aligned_cols=31 Identities=13% Similarity=0.219 Sum_probs=24.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
|||.|+..|..|. .+++.|.+.||+|+++..
T Consensus 6 m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~~ 36 (299)
T 1vpd_A 6 MKVGFIGLGIMGK-----PMSKNLLKAGYSLVVSDR 36 (299)
T ss_dssp CEEEEECCSTTHH-----HHHHHHHHTTCEEEEECS
T ss_pred ceEEEECchHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 7999998777664 468888899999987654
No 414
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=23.60 E-value=1.2e+02 Score=24.37 Aligned_cols=39 Identities=10% Similarity=-0.002 Sum_probs=29.8
Q ss_pred CcEEEEEcCCCccCHHHHHH--HHHHHHhCCCeEEEEeCCc
Q 012194 13 LVHCLVLSYPAQGHINPLLQ--FAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~--La~~L~~rGh~Vt~~~~~~ 51 (468)
....+++.+|..|+..-+.. +++.|.++|+.|..+-...
T Consensus 31 ~~~~vv~~hG~~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g 71 (210)
T 1imj_A 31 ARFSVLLLHGIRFSSETWQNLGTLHRLAQAGYRAVAIDLPG 71 (210)
T ss_dssp CSCEEEECCCTTCCHHHHHHHTHHHHHHHTTCEEEEECCTT
T ss_pred CCceEEEECCCCCccceeecchhHHHHHHCCCeEEEecCCC
Confidence 34567777777788887777 5999999999998775443
No 415
>3qbc_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; protein-inhibitor complex, ferredoxin-like fold; HET: B55; 1.65A {Staphylococcus aureus}
Probab=23.53 E-value=1.1e+02 Score=24.41 Aligned_cols=28 Identities=14% Similarity=0.190 Sum_probs=23.4
Q ss_pred eEEEEecCcCCCCHHHHHHHHHHHHhCC
Q 012194 282 VVYVSFGSYAPLKVEEMEELAWGLKATN 309 (468)
Q Consensus 282 ~I~is~Gs~~~~~~~~~~~~~~a~~~~~ 309 (468)
.+|+++||....+...++..++++.+.+
T Consensus 6 ~v~i~LGSNlGd~~~~l~~A~~~L~~~~ 33 (161)
T 3qbc_A 6 QAYLGLGSNIGDRESQLNDAIKILNEYD 33 (161)
T ss_dssp EEEEEEEECSSSHHHHHHHHHHHHHHST
T ss_pred EEEEEEecCccCHHHHHHHHHHHHhcCC
Confidence 6999999998767778888888888754
No 416
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=23.30 E-value=73 Score=27.65 Aligned_cols=38 Identities=13% Similarity=-0.007 Sum_probs=29.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
...+++.+|..|+..-+..+++.|.++|++|..+-...
T Consensus 46 ~p~vv~~hG~~~~~~~~~~~~~~l~~~g~~v~~~d~~G 83 (315)
T 4f0j_A 46 GRTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQVG 83 (315)
T ss_dssp SCEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCTT
T ss_pred CCeEEEEcCCCCcchHHHHHHHHHHHCCCeEEEeecCC
Confidence 34666667777777778899999999999998776543
No 417
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=23.26 E-value=71 Score=28.42 Aligned_cols=31 Identities=13% Similarity=0.122 Sum_probs=21.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVT 48 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 48 (468)
|+|++... .|-+- ..|+++|.++||+|+.+.
T Consensus 3 ~~vlVtGa--tG~iG--~~l~~~L~~~g~~V~~~~ 33 (315)
T 2ydy_A 3 RRVLVTGA--TGLLG--RAVHKEFQQNNWHAVGCG 33 (315)
T ss_dssp CEEEEETT--TSHHH--HHHHHHHHTTTCEEEEEC
T ss_pred CeEEEECC--CcHHH--HHHHHHHHhCCCeEEEEc
Confidence 56766543 33333 367899999999999876
No 418
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=23.20 E-value=55 Score=30.12 Aligned_cols=38 Identities=3% Similarity=-0.020 Sum_probs=26.1
Q ss_pred CCCcEEEEEcCCCcc-C---HHHHHHHHHHHHhCCCeEEEEe
Q 012194 11 CRLVHCLVLSYPAQG-H---INPLLQFAKRLDHKGLKVTLVT 48 (468)
Q Consensus 11 ~~~~~il~~~~~~~G-H---~~p~l~La~~L~~rGh~Vt~~~ 48 (468)
|++.||+++..|..+ | +.--.++.++|.+.||+|..+.
T Consensus 1 M~kkkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~i~ 42 (357)
T 4fu0_A 1 MQNKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIG 42 (357)
T ss_dssp -CCEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEE
T ss_pred CCCCEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEEEEE
Confidence 456799887655443 3 2234468899999999999774
No 419
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=23.17 E-value=48 Score=27.93 Aligned_cols=36 Identities=25% Similarity=0.173 Sum_probs=26.6
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 15 HCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 15 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
..+++.+|..|+..-...+++.|.++|++|..+--+
T Consensus 5 ~~vv~lHG~~~~~~~~~~~~~~l~~~g~~vi~~D~~ 40 (258)
T 3dqz_A 5 HHFVLVHNAYHGAWIWYKLKPLLESAGHRVTAVELA 40 (258)
T ss_dssp CEEEEECCTTCCGGGGTTHHHHHHHTTCEEEEECCT
T ss_pred CcEEEECCCCCccccHHHHHHHHHhCCCEEEEecCC
Confidence 445555666666666788999999999998877544
No 420
>3l18_A Intracellular protease I; gatase1_PFPI_LIKE, hydrolase; 1.78A {Thermococcus onnurineus} SCOP: c.23.16.2 PDB: 1g2i_A
Probab=23.11 E-value=1.8e+02 Score=22.92 Aligned_cols=38 Identities=18% Similarity=0.112 Sum_probs=28.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
.|||+++..++. ...-+....+.|.+.|++|.++++..
T Consensus 2 ~~ki~il~~~g~-~~~e~~~~~~~l~~ag~~v~~vs~~~ 39 (168)
T 3l18_A 2 SMKVLFLSADGF-EDLELIYPLHRIKEEGHEVYVASFQR 39 (168)
T ss_dssp CCEEEEECCTTB-CHHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CcEEEEEeCCCc-cHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 579998887755 33445566778888999999998754
No 421
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=22.93 E-value=30 Score=30.49 Aligned_cols=32 Identities=9% Similarity=0.217 Sum_probs=22.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
|||++.... |-+- ..|++.|.++||+|+.++-
T Consensus 6 m~ilVtGat--G~iG--~~l~~~L~~~g~~V~~~~r 37 (287)
T 3sc6_A 6 ERVIITGAN--GQLG--KQLQEELNPEEYDIYPFDK 37 (287)
T ss_dssp EEEEEESTT--SHHH--HHHHHHSCTTTEEEEEECT
T ss_pred eEEEEECCC--CHHH--HHHHHHHHhCCCEEEEecc
Confidence 677766433 3332 3678899999999998874
No 422
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=22.92 E-value=90 Score=27.64 Aligned_cols=33 Identities=12% Similarity=0.087 Sum_probs=23.9
Q ss_pred cCCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEE
Q 012194 10 SCRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTL 46 (468)
Q Consensus 10 ~~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~ 46 (468)
-.+.|||+++.....- ...+.+.|.++|.+|.+
T Consensus 26 ~~~~mki~iv~~~~~~----~~~l~~~L~~~g~~v~~ 58 (278)
T 1z0s_A 26 GGGGMRAAVVYKTDGH----VKRIEEALKRLEVEVEL 58 (278)
T ss_dssp ----CEEEEEESSSTT----HHHHHHHHHHTTCEEEE
T ss_pred CccceEEEEEeCCcHH----HHHHHHHHHHCCCEEEE
Confidence 3446899998876554 77889999999999876
No 423
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=22.90 E-value=57 Score=30.46 Aligned_cols=35 Identities=17% Similarity=0.246 Sum_probs=26.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
.+.++|+++..|-.| +.+|..|+++|++|+++--.
T Consensus 21 ~~~~dV~IVGaG~aG-----l~~A~~La~~G~~V~v~E~~ 55 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGG-----LSAAVALKQSGIDCDVYEAV 55 (407)
T ss_dssp --CCEEEEECCSHHH-----HHHHHHHHHTTCEEEEEESS
T ss_pred CCCCEEEEECCCHHH-----HHHHHHHHhCCCCEEEEeCC
Confidence 456899998777545 77899999999999998543
No 424
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=22.87 E-value=68 Score=27.24 Aligned_cols=40 Identities=18% Similarity=0.135 Sum_probs=31.3
Q ss_pred CcEEE-EEc-CCCccCHHHHHHHHHHHHhC-CCeEEEEeCCcc
Q 012194 13 LVHCL-VLS-YPAQGHINPLLQFAKRLDHK-GLKVTLVTTYFI 52 (468)
Q Consensus 13 ~~~il-~~~-~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~ 52 (468)
++||+ |++ -|+-|--.-...||..|+++ |++|.++-.+..
T Consensus 3 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~~g~~VlliD~D~~ 45 (245)
T 3ea0_A 3 AKRVFGFVSAKGGDGGSCIAANFAFALSQEPDIHVLAVDISLP 45 (245)
T ss_dssp CCEEEEEEESSTTSSHHHHHHHHHHHHTTSTTCCEEEEECCTT
T ss_pred CCeEEEEECCCCCcchHHHHHHHHHHHHhCcCCCEEEEECCCC
Confidence 45665 433 45669999999999999998 999999877544
No 425
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=22.84 E-value=82 Score=27.29 Aligned_cols=36 Identities=11% Similarity=0.132 Sum_probs=29.0
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 15 HCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 15 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
.|.|..-|+-|--.-...||..|+++|++|.++=.+
T Consensus 3 vI~vs~KGGvGKTT~a~nLA~~la~~G~~VlliD~D 38 (269)
T 1cp2_A 3 QVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCD 38 (269)
T ss_dssp EEEEEECTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred EEEEecCCCCcHHHHHHHHHHHHHHCCCcEEEEcCC
Confidence 345555666788999999999999999999987554
No 426
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=22.71 E-value=1.1e+02 Score=27.84 Aligned_cols=69 Identities=3% Similarity=-0.041 Sum_probs=44.9
Q ss_pred CHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEEeecchHHHhcccCcceeeecCCcchHHHHHH--c
Q 012194 294 KVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQLEVLAHEAAGCFLTHCGWNSTMEALS--L 371 (468)
Q Consensus 294 ~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL~~~~~~~~I~HgG~~s~~Eal~--~ 371 (468)
+.+....+.++|.+...+.||.+.+.... .++.+++....+-+++.. ||=+....+++-|++ .
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~-------------~rlL~~LD~~~i~~~PK~--~~GySDiT~L~~al~~~~ 127 (327)
T 4h1h_A 63 IRSRVADIHEAFNDSSVKAILTVIGGFNS-------------NQLLPYLDYDLISENPKI--LCGFSDITALATAIYTQT 127 (327)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSCG-------------GGGGGGCCHHHHHHSCCE--EEECTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcCCchhH-------------HHHhhhcchhhhccCCeE--EEecccccHHHHHHHHhc
Confidence 45678889999999999999988554221 234555666666566655 777777666666664 2
Q ss_pred CCceee
Q 012194 372 GVPMVA 377 (468)
Q Consensus 372 GvP~l~ 377 (468)
|+..+.
T Consensus 128 g~~t~h 133 (327)
T 4h1h_A 128 ELITYS 133 (327)
T ss_dssp CBCEEE
T ss_pred CeEEEe
Confidence 444433
No 427
>1cbk_A Protein (7,8-dihydro-6-hydroxymethylpterin- pyrophosphokinase); transferase; HET: ROI; 2.02A {Haemophilus influenzae} SCOP: d.58.30.1
Probab=22.69 E-value=1.2e+02 Score=24.30 Aligned_cols=29 Identities=17% Similarity=0.312 Sum_probs=23.9
Q ss_pred eEEEEecCcCCCCHHHHHHHHHHHHhCCC
Q 012194 282 VVYVSFGSYAPLKVEEMEELAWGLKATNQ 310 (468)
Q Consensus 282 ~I~is~Gs~~~~~~~~~~~~~~a~~~~~~ 310 (468)
.+|+++||....+.+.++..+..+.+.+.
T Consensus 3 ~~~i~LGSNlGd~~~~l~~A~~~L~~~~~ 31 (160)
T 1cbk_A 3 TAYIALGSNLNTPVEQLHAALKAISQLSN 31 (160)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTSTT
T ss_pred EEEEEEeccchHHHHHHHHHHHHHhhCCC
Confidence 58999999987777888888888887643
No 428
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=22.66 E-value=86 Score=30.60 Aligned_cols=44 Identities=16% Similarity=0.064 Sum_probs=34.6
Q ss_pred CcEEEEEcCC---CccCHHHHHHHHHHHHhCCCeEEEEeCCcccccc
Q 012194 13 LVHCLVLSYP---AQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSL 56 (468)
Q Consensus 13 ~~~il~~~~~---~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 56 (468)
+||.+|++.| +-|-=.-.-.|+..|..||++||..=.+.+.+.-
T Consensus 2 ~~k~i~vtggv~s~lgkgi~~as~g~ll~~~g~~v~~~k~dpylnvd 48 (535)
T 3nva_A 2 PNKYIVVTGGVLSSVGKGTLVASIGMLLKRRGYNVTAVKIDPYINVD 48 (535)
T ss_dssp CCEEEEEECCCSTTTTHHHHHHHHHHHHHHTTCCEEEEEEECSSSSS
T ss_pred CceEEEEeCccccCcchHHHHHHHHHHHHHCCceEEEEecCcceeec
Confidence 3688888876 4466678889999999999999998776665433
No 429
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=22.65 E-value=1e+02 Score=26.31 Aligned_cols=33 Identities=15% Similarity=0.324 Sum_probs=22.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 15 HCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 15 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
|.++++.++. -+ =.+++++|+++|++|+++.-.
T Consensus 12 k~vlITGasg-gi--G~~la~~l~~~G~~V~~~~r~ 44 (254)
T 2wsb_A 12 ACAAVTGAGS-GI--GLEICRAFAASGARLILIDRE 44 (254)
T ss_dssp CEEEEETTTS-HH--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCc-HH--HHHHHHHHHHCCCEEEEEeCC
Confidence 4555555443 22 257899999999999988653
No 430
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=22.63 E-value=88 Score=21.92 Aligned_cols=30 Identities=13% Similarity=0.004 Sum_probs=22.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEE
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLV 47 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~ 47 (468)
.+|++++..+ ......+..|.+.||+|..+
T Consensus 54 ~~ivvyC~~g----~rs~~a~~~L~~~G~~v~~l 83 (94)
T 1wv9_A 54 RPLLLVCEKG----LLSQVAALYLEAEGYEAMSL 83 (94)
T ss_dssp SCEEEECSSS----HHHHHHHHHHHHHTCCEEEE
T ss_pred CCEEEEcCCC----ChHHHHHHHHHHcCCcEEEE
Confidence 5788888654 25667788999999995444
No 431
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=22.60 E-value=2.3e+02 Score=20.81 Aligned_cols=49 Identities=2% Similarity=0.024 Sum_probs=32.4
Q ss_pred cCCceeecccccchhHHHHHHHhhhcceeEecCCCCCccCHHHHHHHHHHHhcC
Q 012194 371 LGVPMVAMPQWSDQSTNGKYIMDVWKMGLKVPADEKGIVRREAIAHCISEILEG 424 (468)
Q Consensus 371 ~GvP~l~~P~~~DQ~~na~~l~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ll~~ 424 (468)
..+|+|++--..+...-.....+. |+--.+.+ .++.++|..+|.+++++
T Consensus 79 ~~~~ii~~s~~~~~~~~~~~~~~~-g~~~~l~k----P~~~~~l~~~i~~~l~~ 127 (140)
T 3grc_A 79 RDLAIVVVSANAREGELEFNSQPL-AVSTWLEK----PIDENLLILSLHRAIDN 127 (140)
T ss_dssp TTCEEEEECTTHHHHHHHHCCTTT-CCCEEECS----SCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCChHHHHHHhhhc-CCCEEEeC----CCCHHHHHHHHHHHHHh
Confidence 378888776554443333245556 65444543 57999999999999875
No 432
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=22.58 E-value=81 Score=26.61 Aligned_cols=38 Identities=13% Similarity=0.096 Sum_probs=28.3
Q ss_pred CCcEEEEEcCCCccCHHHHH--HHHHHHHhCCCeEEEEeC
Q 012194 12 RLVHCLVLSYPAQGHINPLL--QFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l--~La~~L~~rGh~Vt~~~~ 49 (468)
+.|||.+.+-.++.-=++++ .|.+.|.++||+|.=+++
T Consensus 2 ~~MkIaigsDha~~lK~~~i~~~l~~~L~~~G~eV~D~G~ 41 (214)
T 3ono_A 2 NAMKIALMMENSQAAKNAMVAGELNSVAGGLGHDVFNVGM 41 (214)
T ss_dssp CCCEEEECCCGGGGGGHHHHHHHHHHHHHHTTCEEEECSC
T ss_pred CccEEEEECCCcHHHHChhHHHHHHHHHHHCCCEEEEcCC
Confidence 45899887766644344555 799999999999987664
No 433
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=22.57 E-value=1.1e+02 Score=27.15 Aligned_cols=33 Identities=15% Similarity=0.165 Sum_probs=25.7
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVT 48 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 48 (468)
++.|||+++... .......+.|.+.||+|.+..
T Consensus 5 ~~~mki~v~~~~-----~~~~~~~~~L~~~g~~v~~~~ 37 (300)
T 2rir_A 5 LTGLKIAVIGGD-----ARQLEIIRKLTEQQADIYLVG 37 (300)
T ss_dssp CCSCEEEEESBC-----HHHHHHHHHHHHTTCEEEEES
T ss_pred ccCCEEEEECCC-----HHHHHHHHHHHhCCCEEEEEe
Confidence 567899888543 356677899999999998764
No 434
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=22.46 E-value=92 Score=27.11 Aligned_cols=32 Identities=25% Similarity=0.283 Sum_probs=23.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 15 HCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 15 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
|+++++.++.| + =.+++++|+++|++|+++.-
T Consensus 12 k~~lVTGas~g-I--G~~ia~~l~~~G~~V~~~~r 43 (276)
T 1mxh_A 12 PAAVITGGARR-I--GHSIAVRLHQQGFRVVVHYR 43 (276)
T ss_dssp CEEEETTCSSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcH-H--HHHHHHHHHHCCCEEEEEeC
Confidence 56677766553 2 24789999999999998865
No 435
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=22.43 E-value=52 Score=31.08 Aligned_cols=38 Identities=11% Similarity=0.017 Sum_probs=23.9
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFI 52 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 52 (468)
...++|++... .|-+- ..|+++|.++|++|++++-...
T Consensus 67 ~~~~~vlVTGa--tG~iG--~~l~~~L~~~g~~V~~~~R~~~ 104 (427)
T 4f6c_A 67 RPLGNTLLTGA--TGFLG--AYLIEALQGYSHRIYCFIRADN 104 (427)
T ss_dssp CCCEEEEEECT--TSHHH--HHHHHHHTTTEEEEEEEEECSS
T ss_pred CCCCEEEEecC--CcHHH--HHHHHHHHcCCCEEEEEECCCC
Confidence 33445555433 33333 4788889889999998875443
No 436
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=22.41 E-value=4e+02 Score=23.48 Aligned_cols=109 Identities=10% Similarity=0.025 Sum_probs=61.1
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhC--CCeEEEEeCCccccccccCCCCCCCCeEEEEcCCCCCCCCCCccccHH
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHK--GLKVTLVTTYFISKSLHRDSSSSSASIALEAISDGYDQGGSAQAESIE 88 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~r--Gh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~~~~~~~~~~~~~~~~~~ 88 (468)
.+++||+++..+. || -+.+|..+.... ..+|..+.+..... +.+. +...|+.+..+|.... +-
T Consensus 86 ~~~~ri~vl~Sg~-g~--nl~~ll~~~~~g~l~~~i~~Visn~~~a-~~~~--A~~~gIp~~~~~~~~~--------~r- 150 (287)
T 3nrb_A 86 TDRKKVVIMVSKF-DH--CLGDLLYRHRLGELDMEVVGIISNHPRE-ALSV--SLVGDIPFHYLPVTPA--------TK- 150 (287)
T ss_dssp TCCCEEEEEECSC-CH--HHHHHHHHHHHTSSCCEEEEEEESSCGG-GCCC--CCCTTSCEEECCCCGG--------GH-
T ss_pred CCCcEEEEEEeCC-Cc--CHHHHHHHHHCCCCCeEEEEEEeCChHH-HHHH--HHHcCCCEEEEeccCc--------ch-
Confidence 3568998877765 44 334555554432 46887766543221 2222 2234888888874210 10
Q ss_pred HHHHHHHHhchHHHHHHHHHhcCCCCCccEEEeCCCc-chHHHHHHHcCCceEEEcccc
Q 012194 89 AYLEKFWQIGPRSLCELVEKMNGSVVPVDCIVYDSFL-PWALDVAKKFGLVGAAFLTQS 146 (468)
Q Consensus 89 ~~~~~~~~~~~~~~~~~l~~l~~~~~p~DlVI~D~~~-~~~~~~A~~lgiP~i~~~~~~ 146 (468)
......+.+.+++.. +|+||.=.+. .....+.+.+.-.++-+.++.
T Consensus 151 -------~~~~~~~~~~l~~~~-----~Dlivlagym~il~~~~l~~~~~~~iNiHpSl 197 (287)
T 3nrb_A 151 -------AAQESQIKNIVTQSQ-----ADLIVLARYMQILSDDLSAFLSGRCINIHHSF 197 (287)
T ss_dssp -------HHHHHHHHHHHHHHT-----CSEEEESSCCSCCCHHHHHHHTTSEEEEESSC
T ss_pred -------hhHHHHHHHHHHHhC-----CCEEEhhhhhhhcCHHHHhhccCCeEEECccc
Confidence 111233445555543 5999987765 445666677777777776543
No 437
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=22.39 E-value=56 Score=30.54 Aligned_cols=43 Identities=7% Similarity=-0.086 Sum_probs=29.2
Q ss_pred hhcCCCcEEEEEcCCCccCH----HHHHHHHHHHHhCCCeEEEEeCC
Q 012194 8 AASCRLVHCLVLSYPAQGHI----NPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 8 ~~~~~~~~il~~~~~~~GH~----~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
...|++|||+++..|-.+-- .--.++.+.|.+.||+|..+...
T Consensus 32 ~~~m~~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~i~i~ 78 (383)
T 3k3p_A 32 RGSMSKETLVLLYGGRSAERDVSVLSAESVMRAINYDNFLVKTYFIT 78 (383)
T ss_dssp -----CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEEEEEC
T ss_pred cccccCCeEEEEeCCCCCcchHHHHHHHHHHHHhhhcCCEEEEEEec
Confidence 34467789998887755543 34567788888889999988754
No 438
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=22.38 E-value=65 Score=27.54 Aligned_cols=37 Identities=8% Similarity=0.038 Sum_probs=30.0
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
+..++++.+|..|+..-+..+++.|.++|+.|..+-.
T Consensus 48 ~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~ 84 (258)
T 2fx5_A 48 RHPVILWGNGTGAGPSTYAGLLSHWASHGFVVAAAET 84 (258)
T ss_dssp CEEEEEEECCTTCCGGGGHHHHHHHHHHTCEEEEECC
T ss_pred CceEEEEECCCCCCchhHHHHHHHHHhCCeEEEEecC
Confidence 4467778888888888889999999999998876654
No 439
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=22.18 E-value=1.2e+02 Score=28.82 Aligned_cols=41 Identities=20% Similarity=0.200 Sum_probs=34.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhC-CCeEEEEeCCcccc
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHK-GLKVTLVTTYFISK 54 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~r-Gh~Vt~~~~~~~~~ 54 (468)
..|+++..++-|-..-...||..|+++ |++|.++..+.++.
T Consensus 101 ~vI~ivG~~GvGKTT~a~~LA~~l~~~~G~kVllvd~D~~r~ 142 (433)
T 2xxa_A 101 AVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRP 142 (433)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHHHHHTSCCCEEEEECCCSST
T ss_pred eEEEEECCCCCCHHHHHHHHHHHHHHhcCCeEEEEecCCCCc
Confidence 345667777789999999999999999 99999999887654
No 440
>3dfi_A Pseudoaglycone deacetylase DBV21; single alpha-beta domain, hydrolase; 2.10A {Actinoplanes teichomyceticus}
Probab=22.18 E-value=1.1e+02 Score=26.98 Aligned_cols=40 Identities=18% Similarity=0.147 Sum_probs=26.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
+.+|||++.-.-.--..-+=.+...+.++|++|++++-..
T Consensus 6 ~~~rvLvv~aHPDDe~l~~GGtia~~~~~G~~V~vv~~T~ 45 (270)
T 3dfi_A 6 DRTRILAISPHLDDAVLSVGASLAQAEQDGGKVTVFTVFA 45 (270)
T ss_dssp CCSEEEEEESSTTHHHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCEEEEEeCCchHHHhhHHHHHHHHhCCCeEEEEEEeC
Confidence 4578886654444444555566666778999999877443
No 441
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=22.16 E-value=88 Score=27.44 Aligned_cols=34 Identities=12% Similarity=0.059 Sum_probs=25.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
.|+++++.++.| -=.++|++|+++|++|.++.-.
T Consensus 27 ~k~vlVTGas~G---IG~aia~~l~~~G~~V~~~~r~ 60 (277)
T 4dqx_A 27 QRVCIVTGGGSG---IGRATAELFAKNGAYVVVADVN 60 (277)
T ss_dssp TCEEEEETTTSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCcH---HHHHHHHHHHHCCCEEEEEeCC
Confidence 367777777653 2257899999999999887643
No 442
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=22.09 E-value=81 Score=27.19 Aligned_cols=39 Identities=23% Similarity=0.221 Sum_probs=30.3
Q ss_pred CcEEEEEc--CCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 13 LVHCLVLS--YPAQGHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 13 ~~~il~~~--~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
+|+++.++ -|+-|--.-...||..|+++|++|.++=.+.
T Consensus 5 ~~~vI~v~s~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 45 (257)
T 1wcv_1 5 KVRRIALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDP 45 (257)
T ss_dssp CCCEEEECCSSCCHHHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred CCEEEEEEeCCCCchHHHHHHHHHHHHHHCCCCEEEEECCC
Confidence 45665443 4455888899999999999999999987654
No 443
>3ci9_A Heat shock factor-binding protein 1; triple helix, nucleus, transcription; 1.80A {Homo sapiens}
Probab=22.07 E-value=62 Score=19.97 Aligned_cols=37 Identities=8% Similarity=0.148 Sum_probs=26.4
Q ss_pred CHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCc
Q 012194 410 RREAIAHCISEILEGERGKEIRQNAGKWSNFAKEAVAKGGSS 451 (468)
Q Consensus 410 ~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~~~~~~g~~ 451 (468)
+.++|...+..+|+ .+..+-..++..+-..+++=|+.
T Consensus 3 ~~~dLt~~vq~LL~-----qmq~kFq~mS~~I~~riDdM~~R 39 (48)
T 3ci9_A 3 TVQDLTSVVQTLLQ-----QMQDKFQTISDQIIGRIDDMSSR 39 (48)
T ss_dssp CHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhH
Confidence 67899999999995 57777777777776554444443
No 444
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=22.05 E-value=1.3e+02 Score=24.07 Aligned_cols=29 Identities=21% Similarity=0.315 Sum_probs=23.0
Q ss_pred eEEEEecCcCCCCHHHHHHHHHHHHhCCC
Q 012194 282 VVYVSFGSYAPLKVEEMEELAWGLKATNQ 310 (468)
Q Consensus 282 ~I~is~Gs~~~~~~~~~~~~~~a~~~~~~ 310 (468)
+.|+++||....+...++..+..+.+...
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~~~ 30 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDIPE 30 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTSTT
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcCCC
Confidence 57999999987667778888888887643
No 445
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=21.98 E-value=58 Score=28.21 Aligned_cols=32 Identities=6% Similarity=0.076 Sum_probs=24.6
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
.|||.|+..|..|. .+++.|.+.||+|+++..
T Consensus 3 ~m~i~iiG~G~mG~-----~~a~~l~~~g~~v~~~~~ 34 (259)
T 2ahr_A 3 AMKIGIIGVGKMAS-----AIIKGLKQTPHELIISGS 34 (259)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHTTSSCEEEEECS
T ss_pred ccEEEEECCCHHHH-----HHHHHHHhCCCeEEEECC
Confidence 47999997766553 568889999999987654
No 446
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=21.86 E-value=82 Score=29.02 Aligned_cols=34 Identities=24% Similarity=0.321 Sum_probs=23.5
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeC
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKG-LKVTLVTT 49 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rG-h~Vt~~~~ 49 (468)
+.|+|++... .|-+- ..|+++|.++| |+|+.+.-
T Consensus 31 ~~~~ilVtGa--tG~iG--~~l~~~L~~~g~~~V~~~~r 65 (377)
T 2q1s_A 31 ANTNVMVVGG--AGFVG--SNLVKRLLELGVNQVHVVDN 65 (377)
T ss_dssp TTCEEEEETT--TSHHH--HHHHHHHHHTTCSEEEEECC
T ss_pred CCCEEEEECC--ccHHH--HHHHHHHHHcCCceEEEEEC
Confidence 3467766543 33332 56789999999 99998864
No 447
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=21.84 E-value=84 Score=30.75 Aligned_cols=74 Identities=8% Similarity=-0.071 Sum_probs=42.5
Q ss_pred HHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEEeecc-hH---------HHhcccCcceeeecCCcc-----
Q 012194 299 EELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCP-QL---------EVLAHEAAGCFLTHCGWN----- 363 (468)
Q Consensus 299 ~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vp-q~---------~lL~~~~~~~~I~HgG~~----- 363 (468)
+.+++.|++.|.+.++.+++.....+-+. +.+.++.+.-.. |. .+-.++.+ +++|.|-|
T Consensus 6 ~~l~~~L~~~GV~~vfg~PG~~~~~l~~a----l~~~i~~i~~~~E~~Aa~~A~Gyar~tg~~~v--~~~tsGpG~~N~~ 79 (528)
T 1q6z_A 6 GTTYELLRRQGIDTVFGNPGSNALPFLKD----FPEDFRYILALQEACVVGIADGYAQASRKPAF--INLHSAAGTGNAM 79 (528)
T ss_dssp HHHHHHHHHTTCCEEEECCCGGGHHHHTT----CCTTCEEEECSSHHHHHHHHHHHHHHHTSCEE--EEEEHHHHHHHTH
T ss_pred HHHHHHHHHCCCCEEEECCCcchHHHHHH----HhhcCcEEEECcHHHHHHHHHHHHHHhCCCEE--EEEcCChHHHHHH
Confidence 45667777777777766655422111111 112233432222 11 12234555 88888755
Q ss_pred -hHHHHHHcCCceeec
Q 012194 364 -STMEALSLGVPMVAM 378 (468)
Q Consensus 364 -s~~Eal~~GvP~l~~ 378 (468)
.+.||-+.++|+|++
T Consensus 80 ~~l~~A~~~~~Pll~i 95 (528)
T 1q6z_A 80 GALSNAWNSHSPLIVT 95 (528)
T ss_dssp HHHHHHHHTTCCEEEE
T ss_pred HHHHHHhhcCCCEEEE
Confidence 688999999999998
No 448
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=21.78 E-value=64 Score=26.21 Aligned_cols=42 Identities=12% Similarity=0.086 Sum_probs=26.0
Q ss_pred hhhhcCCCcEEEEEcCCCc--------c---CHHHHHHHHHHHHhCCCeEEEEe
Q 012194 6 KKAASCRLVHCLVLSYPAQ--------G---HINPLLQFAKRLDHKGLKVTLVT 48 (468)
Q Consensus 6 ~~~~~~~~~~il~~~~~~~--------G---H~~p~l~La~~L~~rGh~Vt~~~ 48 (468)
++...-+++||.+++.+.. | +.+- --|++.|.+.|++|....
T Consensus 8 h~~~~~~~~~v~iitvsd~~~~~~~~~g~i~D~ng-~~L~~~L~~~G~~v~~~~ 60 (178)
T 3iwt_A 8 HKENAPKSLNFYVITISTSRYEKLLKKEPIVDESG-DIIKQLLIENGHKIIGYS 60 (178)
T ss_dssp -----CCCCEEEEEEECHHHHHHHHTTCCCCCHHH-HHHHHHHHHTTCEEEEEE
T ss_pred HHhcCCCCCEEEEEEEcCCCccccccCCCCCcchH-HHHHHHHHHCCCEEEEEE
Confidence 4444556789999887642 2 3331 237899999999998654
No 449
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=21.75 E-value=61 Score=28.61 Aligned_cols=31 Identities=6% Similarity=0.212 Sum_probs=24.6
Q ss_pred cEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 14 VHCLVLSY-PAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 14 ~~il~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
|||.|+.. |..| ..+++.|.++||+|+++..
T Consensus 12 m~I~iIG~tG~mG-----~~la~~l~~~g~~V~~~~r 43 (286)
T 3c24_A 12 KTVAILGAGGKMG-----ARITRKIHDSAHHLAAIEI 43 (286)
T ss_dssp CEEEEETTTSHHH-----HHHHHHHHHSSSEEEEECC
T ss_pred CEEEEECCCCHHH-----HHHHHHHHhCCCEEEEEEC
Confidence 69999877 6556 4578889999999997654
No 450
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=21.73 E-value=96 Score=26.98 Aligned_cols=33 Identities=15% Similarity=0.078 Sum_probs=22.9
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 15 HCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 15 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
|.++++.++.| + =.++++.|.++|++|+++.-.
T Consensus 32 k~vlITGasgg-I--G~~la~~L~~~G~~V~~~~r~ 64 (272)
T 1yb1_A 32 EIVLITGAGHG-I--GRLTAYEFAKLKSKLVLWDIN 64 (272)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCch-H--HHHHHHHHHHCCCEEEEEEcC
Confidence 45555555432 2 257899999999999987753
No 451
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=21.72 E-value=1.9e+02 Score=25.68 Aligned_cols=24 Identities=13% Similarity=0.239 Sum_probs=15.3
Q ss_pred hhhHhHhhhcCCCCceEEEEecCcC
Q 012194 267 NESCIKWLNDRAKGSVVYVSFGSYA 291 (468)
Q Consensus 267 ~~~~~~~l~~~~~~~~I~is~Gs~~ 291 (468)
|++..+|.+..+-+ .+-+++||.-
T Consensus 161 Peea~~Fv~~TgvD-~LAvaiGt~H 184 (288)
T 3q94_A 161 PAECKHLVEATGID-CLAPALGSVH 184 (288)
T ss_dssp HHHHHHHHHHHCCS-EEEECSSCBS
T ss_pred HHHHHHHHHHHCCC-EEEEEcCccc
Confidence 66777777654333 6677777764
No 452
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=21.72 E-value=67 Score=29.26 Aligned_cols=36 Identities=22% Similarity=0.240 Sum_probs=22.8
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeCCc
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKG-LKVTLVTTYF 51 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rG-h~Vt~~~~~~ 51 (468)
+.|+|++... .|-+- ..|+++|.++| |+|+.+.-..
T Consensus 45 ~~~~vlVtGa--tG~iG--~~l~~~L~~~g~~~V~~~~r~~ 81 (357)
T 2x6t_A 45 EGRMIIVTGG--AGFIG--SNIVKALNDKGITDILVVDNLK 81 (357)
T ss_dssp ---CEEEETT--TSHHH--HHHHHHHHHTTCCCEEEEECCS
T ss_pred CCCEEEEECC--CcHHH--HHHHHHHHHCCCcEEEEEecCC
Confidence 4467766643 33332 46789999999 9999887543
No 453
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=21.71 E-value=40 Score=29.34 Aligned_cols=31 Identities=13% Similarity=0.187 Sum_probs=23.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKG-LKVTLVTT 49 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rG-h~Vt~~~~ 49 (468)
|||.|+..|..|. .+++.|.+.| |+|+++..
T Consensus 1 m~i~iiG~G~mG~-----~~a~~l~~~g~~~v~~~~r 32 (263)
T 1yqg_A 1 MNVYFLGGGNMAA-----AVAGGLVKQGGYRIYIANR 32 (263)
T ss_dssp CEEEEECCSHHHH-----HHHHHHHHHCSCEEEEECS
T ss_pred CEEEEECchHHHH-----HHHHHHHHCCCCeEEEECC
Confidence 6888887665553 5678888889 99988764
No 454
>1u9c_A APC35852; structural genomics, protein structure initiative, MCSG, PAR disease, chaperone, cysteine protease, PSI; 1.35A {Geobacillus stearothermophilus} SCOP: c.23.16.2
Probab=21.68 E-value=1.7e+02 Score=24.55 Aligned_cols=38 Identities=11% Similarity=0.023 Sum_probs=27.2
Q ss_pred cEEEEEcCC---------CccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 14 VHCLVLSYP---------AQGHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 14 ~~il~~~~~---------~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
+||+|+... ..-...=+....+.|.+.|++|+++++..
T Consensus 6 ~kv~ill~~~~~~~~~~~~G~~~~e~~~p~~~l~~ag~~v~~vs~~~ 52 (224)
T 1u9c_A 6 KRVLMVVTNHTTITDDHKTGLWLEEFAVPYLVFQEKGYDVKVASIQG 52 (224)
T ss_dssp CEEEEEECCCCEEETTEECCBCHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred ceEEEEECCcccccCCCCCceeHHHHHHHHHHHHHCCCeEEEECCCC
Confidence 378876652 22344566777788888999999999754
No 455
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=21.67 E-value=1.3e+02 Score=29.83 Aligned_cols=29 Identities=17% Similarity=0.298 Sum_probs=23.8
Q ss_pred cccCcceeeecCCcc------hHHHHHHcCCceeecc
Q 012194 349 AHEAAGCFLTHCGWN------STMEALSLGVPMVAMP 379 (468)
Q Consensus 349 ~~~~~~~~I~HgG~~------s~~Eal~~GvP~l~~P 379 (468)
.++.+ ++++.|-| .+.||-+.++|+|++-
T Consensus 73 G~pgv--~~~TsGpG~~N~~~gia~A~~d~vPll~it 107 (578)
T 3lq1_A 73 KRPVV--LLCTSGTAAANYFPAVAEANLSQIPLIVLT 107 (578)
T ss_dssp CCCEE--EEECSSHHHHTTHHHHHHHHHTTCCEEEEE
T ss_pred CCCEE--EEECCchhhhhhhHHHHHHHhcCCCeEEEe
Confidence 34566 99999976 6789999999999864
No 456
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=21.65 E-value=3.3e+02 Score=22.20 Aligned_cols=138 Identities=15% Similarity=0.185 Sum_probs=78.4
Q ss_pred CceEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEEeecchHHHhc-----ccCcc
Q 012194 280 GSVVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQLEVLA-----HEAAG 354 (468)
Q Consensus 280 ~~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL~-----~~~~~ 354 (468)
-|.|-|-+||.. +....+++...++.+|..+-..+-+... .|+.. .++.. .+++
T Consensus 13 ~~~V~IimGS~S--D~~v~~~a~~~L~~~Gi~~dv~V~SaHR--~p~~l----------------~~~~~~a~~~g~~V- 71 (183)
T 1o4v_A 13 VPRVGIIMGSDS--DLPVMKQAAEILEEFGIDYEITIVSAHR--TPDRM----------------FEYAKNAEERGIEV- 71 (183)
T ss_dssp -CEEEEEESCGG--GHHHHHHHHHHHHHTTCEEEEEECCTTT--CHHHH----------------HHHHHHTTTTTCCE-
T ss_pred CCeEEEEeccHH--HHHHHHHHHHHHHHcCCCeEEEEEcccC--CHHHH----------------HHHHHHHHhCCCcE-
Confidence 357888888875 5677888999999998875444432211 11110 12222 2445
Q ss_pred eeeecCCcc----hHHHHHHcCCceeecccccc-hhHHHHHHHhhhcc--ee---EecCCCCCccCHHHHHHHHHHHhcC
Q 012194 355 CFLTHCGWN----STMEALSLGVPMVAMPQWSD-QSTNGKYIMDVWKM--GL---KVPADEKGIVRREAIAHCISEILEG 424 (468)
Q Consensus 355 ~~I~HgG~~----s~~Eal~~GvP~l~~P~~~D-Q~~na~~l~~~~g~--G~---~l~~~~~~~~~~~~l~~~i~~ll~~ 424 (468)
+|.=+|.. ++..++ .-+|+|.+|.... -......+.-. +. |+ .+..+ +-.++.-+...|. -+.|
T Consensus 72 -iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlSiv-qmP~GvpVatV~Id--~~~nAa~lAaqIl-a~~d 145 (183)
T 1o4v_A 72 -IIAGAGGAAHLPGMVASI-THLPVIGVPVKTSTLNGLDSLFSIV-QMPGGVPVATVAIN--NAKNAGILAASIL-GIKY 145 (183)
T ss_dssp -EEEEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHH-TCCTTCCCEECCTT--CHHHHHHHHHHHH-HTTC
T ss_pred -EEEecCcccccHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHh-cCCCCCeeEEEecC--CchHHHHHHHHHH-hcCC
Confidence 88877654 444444 6799999998552 22223323222 33 32 12221 2445555555554 3566
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHc
Q 012194 425 ERGKEIRQNAGKWSNFAKEAVAK 447 (468)
Q Consensus 425 ~~~~~~~~~a~~~~~~~~~~~~~ 447 (468)
+ +++++.+..++...+.+.+
T Consensus 146 ~---~l~~kL~~~r~~~~~~v~~ 165 (183)
T 1o4v_A 146 P---EIARKVKEYKERMKREVLE 165 (183)
T ss_dssp H---HHHHHHHHHHHHHHHHHHH
T ss_pred H---HHHHHHHHHHHHHHHHHHH
Confidence 5 8888888888888765433
No 457
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=21.60 E-value=69 Score=28.47 Aligned_cols=33 Identities=12% Similarity=0.180 Sum_probs=23.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
|+|++.... |-+- ..|+++|.++||+|+.++-.
T Consensus 3 ~~vlVtGat--G~iG--~~l~~~L~~~g~~V~~~~r~ 35 (311)
T 3m2p_A 3 LKIAVTGGT--GFLG--QYVVESIKNDGNTPIILTRS 35 (311)
T ss_dssp CEEEEETTT--SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCC--cHHH--HHHHHHHHhCCCEEEEEeCC
Confidence 677766433 3332 36788999999999998864
No 458
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=21.60 E-value=78 Score=27.45 Aligned_cols=33 Identities=15% Similarity=0.316 Sum_probs=24.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
.|+++++.++.| +- .+++++|+++|++|.++.-
T Consensus 28 ~k~vlVTGas~g-IG--~aia~~l~~~G~~V~~~~r 60 (260)
T 3un1_A 28 QKVVVITGASQG-IG--AGLVRAYRDRNYRVVATSR 60 (260)
T ss_dssp CCEEEESSCSSH-HH--HHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCCH-HH--HHHHHHHHHCCCEEEEEeC
Confidence 366777766542 22 4789999999999998764
No 459
>1wrd_A TOM1, target of MYB protein 1; three-helix bundle, ubiquitin-binding protein, protein trans signaling protein complex; 1.75A {Homo sapiens} SCOP: a.7.8.1
Probab=21.56 E-value=1.6e+02 Score=21.49 Aligned_cols=29 Identities=24% Similarity=0.258 Sum_probs=14.6
Q ss_pred cCHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHH
Q 012194 409 VRREAIAHCISEILEGERGKEIRQNAGKWSNFAKE 443 (468)
Q Consensus 409 ~~~~~l~~~i~~ll~~~~~~~~~~~a~~~~~~~~~ 443 (468)
++++.+.+...++ +.++.|++-+.+.+..
T Consensus 3 ~~~eq~~k~~~el------~~v~~n~~lL~EML~~ 31 (103)
T 1wrd_A 3 LGSEQIGKLRSEL------EMVSGNVRVMSEMLTE 31 (103)
T ss_dssp SSSTTHHHHHHHH------HHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH------HHHHHHHHHHHHHHHh
Confidence 4455554444443 2555555555555543
No 460
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=21.51 E-value=73 Score=27.00 Aligned_cols=34 Identities=21% Similarity=0.293 Sum_probs=22.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCC-CeEEEEeCC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKG-LKVTLVTTY 50 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rG-h~Vt~~~~~ 50 (468)
|+.++++.++ |-+- .+++++|.++| |+|+.+.-.
T Consensus 23 mk~vlVtGat-G~iG--~~l~~~L~~~G~~~V~~~~R~ 57 (236)
T 3qvo_A 23 MKNVLILGAG-GQIA--RHVINQLADKQTIKQTLFARQ 57 (236)
T ss_dssp CEEEEEETTT-SHHH--HHHHHHHTTCTTEEEEEEESS
T ss_pred ccEEEEEeCC-cHHH--HHHHHHHHhCCCceEEEEEcC
Confidence 4544444432 3232 47889999999 999988753
No 461
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=21.49 E-value=84 Score=28.28 Aligned_cols=32 Identities=13% Similarity=0.238 Sum_probs=21.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
|+|++.. +.|-+- ..|+++|.++||+|+.+.-
T Consensus 2 ~~vlVTG--atG~iG--~~l~~~L~~~g~~V~~~~r 33 (347)
T 1orr_A 2 AKLLITG--GCGFLG--SNLASFALSQGIDLIVFDN 33 (347)
T ss_dssp CEEEEET--TTSHHH--HHHHHHHHHTTCEEEEEEC
T ss_pred cEEEEeC--CCchhH--HHHHHHHHhCCCEEEEEeC
Confidence 4565553 233332 4678999999999998863
No 462
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=21.49 E-value=66 Score=28.97 Aligned_cols=31 Identities=23% Similarity=0.303 Sum_probs=21.6
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVT 48 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 48 (468)
|+|++. |+.|.+- ..|+++|.++||+|+.+.
T Consensus 1 m~vlVT--GatG~iG--~~l~~~L~~~G~~V~~~~ 31 (338)
T 1udb_A 1 MRVLVT--GGSGYIG--SHTCVQLLQNGHDVIILD 31 (338)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEE
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEe
Confidence 566554 3344443 367899999999999875
No 463
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=21.45 E-value=82 Score=29.19 Aligned_cols=34 Identities=21% Similarity=0.213 Sum_probs=22.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
+.++|++.... |-+- ..|+++|.++||+|+.+.-
T Consensus 10 ~~~~vlVTG~t--GfIG--~~l~~~L~~~G~~V~~~~r 43 (404)
T 1i24_A 10 HGSRVMVIGGD--GYCG--WATALHLSKKNYEVCIVDN 43 (404)
T ss_dssp --CEEEEETTT--SHHH--HHHHHHHHHTTCEEEEEEC
T ss_pred CCCeEEEeCCC--cHHH--HHHHHHHHhCCCeEEEEEe
Confidence 35677765443 4333 4578999999999998854
No 464
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=21.35 E-value=93 Score=28.25 Aligned_cols=39 Identities=10% Similarity=-0.044 Sum_probs=22.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFI 52 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 52 (468)
.+|.+.+++.-|+-+-.-.++..|..-|.+|++++|+.+
T Consensus 169 l~ia~a~~~~vGD~rva~Sl~~~~~~~G~~v~~~~P~~~ 207 (324)
T 1js1_X 169 VVMTWAPHPRPLPQAVPNSFAEWMNATDYEFVITHPEGY 207 (324)
T ss_dssp EEEECCCCSSCCCSHHHHHHHHHHHTSSSEEEEECCTTC
T ss_pred EEEEEEcccccCCcchHHHHHHHHHHCCCEEEEeCCccc
Confidence 455555555556644455556666656666666666544
No 465
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=21.30 E-value=52 Score=27.39 Aligned_cols=36 Identities=11% Similarity=0.178 Sum_probs=18.1
Q ss_pred cCCCcEEEEEcCCCc--cCHHHHHHHHHHHHhCCCeEE
Q 012194 10 SCRLVHCLVLSYPAQ--GHINPLLQFAKRLDHKGLKVT 45 (468)
Q Consensus 10 ~~~~~~il~~~~~~~--GH~~p~l~La~~L~~rGh~Vt 45 (468)
.|..|||+++....+ |.-.-+...+.+....|++|.
T Consensus 3 ~M~~mkIl~I~GS~r~~s~t~~la~~~~~~~~~g~~v~ 40 (199)
T 4hs4_A 3 TTSPLHFVTLLGSLRKASFNAAVARALPEIAPEGIAIT 40 (199)
T ss_dssp --CCEEEEEEECCCSTTCHHHHHHHHHHHHCCTTEEEE
T ss_pred CCCCCEEEEEEcCCCCCChHHHHHHHHHHHccCCCEEE
Confidence 356789998776644 332223333333233566666
No 466
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=21.29 E-value=1.1e+02 Score=26.29 Aligned_cols=34 Identities=15% Similarity=0.073 Sum_probs=24.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
.|+++++.++.| + =.++|++|+++|++|.++.-.
T Consensus 7 ~k~vlVTGas~G-I--G~aia~~l~~~G~~V~~~~r~ 40 (252)
T 3h7a_A 7 NATVAVIGAGDY-I--GAEIAKKFAAEGFTVFAGRRN 40 (252)
T ss_dssp SCEEEEECCSSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCch-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 366777766653 2 258899999999999887653
No 467
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=21.28 E-value=72 Score=29.67 Aligned_cols=34 Identities=21% Similarity=0.166 Sum_probs=27.0
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
..++|+++..|-.| +.+|..|+++|++|+++--.
T Consensus 4 ~~~~V~IVGaG~aG-----l~~A~~L~~~G~~v~v~E~~ 37 (397)
T 2vou_A 4 TTDRIAVVGGSISG-----LTAALMLRDAGVDVDVYERS 37 (397)
T ss_dssp CCSEEEEECCSHHH-----HHHHHHHHHTTCEEEEECSS
T ss_pred CCCcEEEECCCHHH-----HHHHHHHHhCCCCEEEEecC
Confidence 45789988877545 77888999999999998643
No 468
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=21.23 E-value=1.3e+02 Score=25.58 Aligned_cols=34 Identities=21% Similarity=0.176 Sum_probs=25.7
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
-|+++++.++.| ==.+++++|+++|++|.+....
T Consensus 7 ~k~vlITGas~g---IG~~~a~~l~~~G~~v~~~~~~ 40 (255)
T 3icc_A 7 GKVALVTGASRG---IGRAIAKRLANDGALVAIHYGN 40 (255)
T ss_dssp TCEEEETTCSSH---HHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEECCCCh---HHHHHHHHHHHCCCeEEEEeCC
Confidence 467788877765 2357899999999999886543
No 469
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=21.23 E-value=52 Score=29.63 Aligned_cols=35 Identities=17% Similarity=0.196 Sum_probs=25.4
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCC--eEEEEeCCc
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGL--KVTLVTTYF 51 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh--~Vt~~~~~~ 51 (468)
+.|||+++..|+.|-. +|..|+..|| +|+++....
T Consensus 6 ~~mkI~IiGaG~vG~~-----~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 6 KPTKLAVIGAGAVGST-----LAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp -CCEEEEECCSHHHHH-----HHHHHHHTTCCSEEEEECSSH
T ss_pred CCCEEEEECCCHHHHH-----HHHHHHhCCCCCEEEEEeCCh
Confidence 3589999876554432 6778889999 999987653
No 470
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=21.21 E-value=83 Score=26.53 Aligned_cols=36 Identities=17% Similarity=0.037 Sum_probs=27.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 15 HCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 15 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
..+++.+|..|+..-...+++.|.++|++|..+--+
T Consensus 13 ~~vvllHG~~~~~~~~~~~~~~l~~~g~~v~~~D~~ 48 (267)
T 3sty_A 13 KHFVLVHAAFHGAWCWYKIVALMRSSGHNVTALDLG 48 (267)
T ss_dssp CEEEEECCTTCCGGGGHHHHHHHHHTTCEEEEECCT
T ss_pred CeEEEECCCCCCcchHHHHHHHHHhcCCeEEEeccc
Confidence 455566666677777789999999999998777543
No 471
>3dff_A Teicoplanin pseudoaglycone deacetylases ORF2; lipoglycopeptide, zinc dependen hydrolase; HET: MSE PG4; 1.60A {Actinoplanes teichomyceticus} PDB: 2x9l_A* 3dfk_A* 3dfm_A 2xad_A*
Probab=21.20 E-value=1e+02 Score=27.10 Aligned_cols=40 Identities=13% Similarity=0.068 Sum_probs=25.1
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
..++||++.-.-.--..-+=.+...++++|++|++++-..
T Consensus 6 ~~~rvLvv~aHPDDe~lg~GGtia~~~~~G~~V~vv~~T~ 45 (273)
T 3dff_A 6 GATRLLAISPHLDDAVLSFGAGLAQAAQDGANVLVYTVFA 45 (273)
T ss_dssp --CEEEEEESSTTHHHHHHHHHHHHHHHTTCEEEEEETTC
T ss_pred CCCCEEEEEeCCChHHHhHHHHHHHHHHCCCcEEEEEEeC
Confidence 3578886554434444455556666777999999887543
No 472
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=21.17 E-value=84 Score=28.38 Aligned_cols=32 Identities=19% Similarity=0.140 Sum_probs=22.1
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
|+|++... .|-+- ..|+++|.++||+|+.+.-
T Consensus 3 ~~vlVtGa--tG~iG--~~l~~~L~~~g~~V~~~~r 34 (348)
T 1ek6_A 3 EKVLVTGG--AGYIG--SHTVLELLEAGYLPVVIDN 34 (348)
T ss_dssp SEEEEETT--TSHHH--HHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEECC--CCHHH--HHHHHHHHHCCCEEEEEec
Confidence 56666533 33332 4678899999999998863
No 473
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=21.15 E-value=3.2e+02 Score=21.88 Aligned_cols=145 Identities=13% Similarity=0.146 Sum_probs=75.9
Q ss_pred ceEEEEecCcCCCCHHHHHHHHHHHHhCCCeEEEEEeCCccCCCCcchhhhccCCeEEEeecchHHHh--cccCcceeee
Q 012194 281 SVVYVSFGSYAPLKVEEMEELAWGLKATNQYFLWVVRESEQAKLPENFSDETSQKGLVVNWCPQLEVL--AHEAAGCFLT 358 (468)
Q Consensus 281 ~~I~is~Gs~~~~~~~~~~~~~~a~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~nv~~~~~vpq~~lL--~~~~~~~~I~ 358 (468)
|.|-|-+||.. +....++....++.+|..+-+.+-+.+. .|+.. .+|+ .-+ ..+++ +|.
T Consensus 6 p~V~IimgS~S--D~~v~~~a~~~l~~~gi~~ev~V~SaHR--tp~~l----------~~~~---~~~~~~g~~V--iIa 66 (166)
T 3oow_A 6 VQVGVIMGSKS--DWSTMKECCDILDNLGIGYECEVVSAHR--TPDKM----------FDYA---ETAKERGLKV--IIA 66 (166)
T ss_dssp EEEEEEESSGG--GHHHHHHHHHHHHHTTCEEEEEECCTTT--CHHHH----------HHHH---HHTTTTTCCE--EEE
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEEcCcC--CHHHH----------HHHH---HHHHhCCCcE--EEE
Confidence 45777777765 5677888899999998865444433211 11111 1111 111 12445 898
Q ss_pred cCCcchHHHHHH---cCCceeecccccch-hHHHHHH--Hhhh-cceeE-ecCCCCCccCHHHHHHHHHHHhcCccHHHH
Q 012194 359 HCGWNSTMEALS---LGVPMVAMPQWSDQ-STNGKYI--MDVW-KMGLK-VPADEKGIVRREAIAHCISEILEGERGKEI 430 (468)
Q Consensus 359 HgG~~s~~Eal~---~GvP~l~~P~~~DQ-~~na~~l--~~~~-g~G~~-l~~~~~~~~~~~~l~~~i~~ll~~~~~~~~ 430 (468)
=+|...-+-++. .-+|+|.+|..... ......+ .+.- |+++. +..++-+-.++.-+...|.. +.|+ ++
T Consensus 67 ~AG~aa~LpgvvA~~t~~PVIgVP~~~~~l~G~dsLlS~vqmp~gvpVatV~I~~ag~~nAa~lAa~Il~-~~d~---~l 142 (166)
T 3oow_A 67 GAGGAAHLPGMVAAKTTLPVLGVPVKSSTLNGQDSLLSIVQMPAGIPVATFAIGMAGAKNAALFAASILQ-HTDI---NI 142 (166)
T ss_dssp EECSSCCHHHHHHHTCSSCEEEEECCCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHHG-GGCH---HH
T ss_pred ECCcchhhHHHHHhccCCCEEEeecCcCCCCCHHHHHHHhcCCCCCceEEEecCCccchHHHHHHHHHHc-CCCH---HH
Confidence 777654444333 35899999985422 1222222 2220 33332 22110001233333333322 4665 89
Q ss_pred HHHHHHHHHHHHHHHHcC
Q 012194 431 RQNAGKWSNFAKEAVAKG 448 (468)
Q Consensus 431 ~~~a~~~~~~~~~~~~~~ 448 (468)
+++.+.+++.+++.+.+.
T Consensus 143 ~~kl~~~r~~~~~~v~~~ 160 (166)
T 3oow_A 143 AKALAEFRAEQTRFVLEN 160 (166)
T ss_dssp HHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999988765443
No 474
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=21.14 E-value=2.1e+02 Score=28.18 Aligned_cols=75 Identities=13% Similarity=0.026 Sum_probs=49.7
Q ss_pred HHHHHHHHHHhCCCeEEEEEeCCc-cCCCCcchhhhccCCeEEEeecch----------HHHhcccCcceeeecCCcc--
Q 012194 297 EMEELAWGLKATNQYFLWVVRESE-QAKLPENFSDETSQKGLVVNWCPQ----------LEVLAHEAAGCFLTHCGWN-- 363 (468)
Q Consensus 297 ~~~~~~~a~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~nv~~~~~vpq----------~~lL~~~~~~~~I~HgG~~-- 363 (468)
..+.+++.|++.|.+.++.+.+.. ...+-+.+. + ++++.-... ..+-.++.+ +++|.|-|
T Consensus 14 ~a~~l~~~L~~~GV~~vfg~PG~~~~~~l~~al~----~-i~~i~~~~E~~Aa~~A~Gyar~tg~p~v--~~~TsGpG~~ 86 (573)
T 2iht_A 14 AAHALLSRLRDHGVGKVFGVVGREAASILFDEVE----G-IDFVLTRHEFTAGVAADVLARITGRPQA--CWATLGPGMT 86 (573)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCGGGGTCCSCSST----T-CEEEECSSHHHHHHHHHHHHHHHCSCEE--EEECTTHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEecCCcchhHHHHHHc----C-CeEEeeCCHHHHHHHHHHHHHHHCCCEE--EEEccCchHH
Confidence 456788888899998888887665 444444432 2 444432221 123334555 99999976
Q ss_pred ----hHHHHHHcCCceeec
Q 012194 364 ----STMEALSLGVPMVAM 378 (468)
Q Consensus 364 ----s~~Eal~~GvP~l~~ 378 (468)
.+.||-+.++|+|++
T Consensus 87 N~~~~v~~A~~~~~Pll~i 105 (573)
T 2iht_A 87 NLSTGIATSVLDRSPVIAL 105 (573)
T ss_dssp HHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHhhCCCEEEE
Confidence 578999999999986
No 475
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=21.12 E-value=63 Score=29.36 Aligned_cols=33 Identities=24% Similarity=0.416 Sum_probs=27.1
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
..+|+++-.|..| +..|..|+++|++|+++-..
T Consensus 4 ~~dvvIIG~G~~G-----l~~A~~La~~G~~V~vlE~~ 36 (369)
T 3dme_A 4 DIDCIVIGAGVVG-----LAIARALAAGGHEVLVAEAA 36 (369)
T ss_dssp CEEEEEECCSHHH-----HHHHHHHHHTTCCEEEECSS
T ss_pred cCCEEEECCCHHH-----HHHHHHHHhCCCeEEEEeCC
Confidence 3688888877666 77889999999999998754
No 476
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=21.08 E-value=1e+02 Score=26.08 Aligned_cols=34 Identities=12% Similarity=0.187 Sum_probs=24.4
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
+|+++++.++.| -=.+++++|+++|++|.++.-.
T Consensus 3 ~k~vlVTGas~G---IG~a~a~~l~~~G~~V~~~~r~ 36 (235)
T 3l6e_A 3 LGHIIVTGAGSG---LGRALTIGLVERGHQVSMMGRR 36 (235)
T ss_dssp CCEEEEESTTSH---HHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCCH---HHHHHHHHHHHCCCEEEEEECC
Confidence 356677766553 1257899999999999887653
No 477
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=21.07 E-value=1e+02 Score=25.89 Aligned_cols=37 Identities=19% Similarity=0.251 Sum_probs=29.0
Q ss_pred EEE-EEc-CCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 15 HCL-VLS-YPAQGHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 15 ~il-~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
|++ |.+ -|+-|--.-...||..|+++|++|.++-...
T Consensus 3 ~~i~v~s~kgGvGKTt~a~~LA~~la~~g~~VlliD~D~ 41 (237)
T 1g3q_A 3 RIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDL 41 (237)
T ss_dssp EEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred eEEEEecCCCCCCHHHHHHHHHHHHHhcCCeEEEEeCCC
Confidence 444 444 3455888999999999999999999987654
No 478
>1n57_A Chaperone HSP31, protein YEDU; alpha-beta sandwich; 1.60A {Escherichia coli} SCOP: c.23.16.2 PDB: 1pv2_A 1izy_A 1ons_A 1izz_A
Probab=20.88 E-value=1.5e+02 Score=26.31 Aligned_cols=40 Identities=18% Similarity=0.089 Sum_probs=29.7
Q ss_pred CcEEEEEcCCC-------------ccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012194 13 LVHCLVLSYPA-------------QGHINPLLQFAKRLDHKGLKVTLVTTYFI 52 (468)
Q Consensus 13 ~~~il~~~~~~-------------~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 52 (468)
.+||+|+.... .-+..=+......|.+.|++|++++....
T Consensus 48 ~kkIlivlt~~~~~~~~~g~~~~~G~~~~E~~~p~~vL~~ag~~v~i~S~~g~ 100 (291)
T 1n57_A 48 KHKILVIAADERYLPTDNGKLFSTGNHPIETLLPLYHLHAAGFEFEVATISGL 100 (291)
T ss_dssp SCEEEEECCSCCEEECTTSCEEECCBCHHHHHHHHHHHHHTTCCEEEEESSSC
T ss_pred CCEEEEEeCCcccccccCCccCCCCCcHHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 35899876653 24555677778889899999999997543
No 479
>3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A*
Probab=20.88 E-value=77 Score=29.26 Aligned_cols=39 Identities=15% Similarity=0.008 Sum_probs=31.5
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCc
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYF 51 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~ 51 (468)
+.-++++.+|..|.-.-+..+++.|+++|+.|..+-...
T Consensus 97 ~~P~Vv~~HG~~~~~~~~~~~a~~La~~Gy~V~~~d~~g 135 (383)
T 3d59_A 97 KYPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRD 135 (383)
T ss_dssp CEEEEEEECCTTCCTTTTHHHHHHHHHTTCEEEEECCCS
T ss_pred CCCEEEEcCCCCCCchHHHHHHHHHHhCceEEEEeccCC
Confidence 456788888877777777889999999999998876653
No 480
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=20.82 E-value=1.1e+02 Score=26.77 Aligned_cols=33 Identities=24% Similarity=0.359 Sum_probs=24.4
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 15 HCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 15 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
|+++++.++.| +- .++|++|+++|++|.++.-.
T Consensus 30 k~vlVTGas~g-IG--~aia~~la~~G~~V~~~~r~ 62 (277)
T 3gvc_A 30 KVAIVTGAGAG-IG--LAVARRLADEGCHVLCADID 62 (277)
T ss_dssp CEEEETTTTST-HH--HHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEECCCcH-HH--HHHHHHHHHCCCEEEEEeCC
Confidence 67777776543 22 47899999999999887643
No 481
>3tqq_A Methionyl-tRNA formyltransferase; protein synthesis; 2.00A {Coxiella burnetii}
Probab=20.81 E-value=85 Score=28.39 Aligned_cols=32 Identities=16% Similarity=0.075 Sum_probs=24.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
+|||+|+..+..+- ...++|.+.||+|..+.+
T Consensus 2 ~mrivf~Gtp~fa~-----~~L~~L~~~~~~v~~Vvt 33 (314)
T 3tqq_A 2 SLKIVFAGTPQFAV-----PTLRALIDSSHRVLAVYT 33 (314)
T ss_dssp CCEEEEEECSGGGH-----HHHHHHHHSSSEEEEEEC
T ss_pred CcEEEEECCCHHHH-----HHHHHHHHCCCeEEEEEe
Confidence 48999998886653 445778889999987665
No 482
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=20.79 E-value=1.3e+02 Score=23.22 Aligned_cols=42 Identities=12% Similarity=0.056 Sum_probs=28.2
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCCcccccc
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTYFISKSL 56 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~ 56 (468)
+...|++++..+ +-......+..|.+.||+|.++.+ .+....
T Consensus 71 ~~~~ivvyC~~g--~~~rs~~aa~~L~~~G~~v~~l~G-G~~~W~ 112 (144)
T 3nhv_A 71 KEKVIITYCWGP--ACNGATKAAAKFAQLGFRVKELIG-GIEYWR 112 (144)
T ss_dssp TTSEEEEECSCT--TCCHHHHHHHHHHHTTCEEEEEES-HHHHHH
T ss_pred CCCeEEEEECCC--CccHHHHHHHHHHHCCCeEEEeCC-cHHHHH
Confidence 346788888763 323455678899999999777764 344443
No 483
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=20.70 E-value=1.1e+02 Score=26.65 Aligned_cols=32 Identities=25% Similarity=0.282 Sum_probs=24.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 15 HCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 15 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
|+++++.++.| + =.++|++|+++|++|.++.-
T Consensus 31 k~vlVTGas~G-I--G~aia~~l~~~G~~Vi~~~r 62 (281)
T 3ppi_A 31 ASAIVSGGAGG-L--GEATVRRLHADGLGVVIADL 62 (281)
T ss_dssp EEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCCh-H--HHHHHHHHHHCCCEEEEEeC
Confidence 67777777654 2 25789999999999988764
No 484
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=26.10 E-value=21 Score=29.94 Aligned_cols=34 Identities=9% Similarity=0.083 Sum_probs=26.2
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
...|||.|+..|..|- .+|+.|.+.||+|+++..
T Consensus 17 ~~~~~I~iIG~G~mG~-----~la~~L~~~G~~V~~~~r 50 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGK-----SLGLKMLQCGYSVVFGSR 50 (201)
Confidence 4568999987777664 468889889999987653
No 485
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=20.50 E-value=1.1e+02 Score=26.22 Aligned_cols=34 Identities=18% Similarity=0.183 Sum_probs=23.9
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHh-CCCeEEEEeCC
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDH-KGLKVTLVTTY 50 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~-rGh~Vt~~~~~ 50 (468)
+|.++++.++. -+- .++++.|++ +|++|.++.-.
T Consensus 4 ~k~vlITGasg-gIG--~~~a~~L~~~~g~~V~~~~r~ 38 (276)
T 1wma_A 4 IHVALVTGGNK-GIG--LAIVRDLCRLFSGDVVLTARD 38 (276)
T ss_dssp CCEEEESSCSS-HHH--HHHHHHHHHHSSSEEEEEESS
T ss_pred CCEEEEeCCCc-HHH--HHHHHHHHHhcCCeEEEEeCC
Confidence 45666665543 232 468999999 99999988754
No 486
>3rfo_A Methionyl-tRNA formyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta structure, cytosol; HET: PGE; 2.40A {Bacillus anthracis}
Probab=20.49 E-value=98 Score=27.99 Aligned_cols=34 Identities=21% Similarity=0.287 Sum_probs=24.7
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
+.|||+|+..+..+- ..-++|.+.||+|..+.+.
T Consensus 3 ~mmrIvf~Gtp~fa~-----~~L~~L~~~~~~v~~Vvt~ 36 (317)
T 3rfo_A 3 AMIKVVFMGTPDFSV-----PVLRRLIEDGYDVIGVVTQ 36 (317)
T ss_dssp TTSEEEEECCSTTHH-----HHHHHHHHTTCEEEEEECC
T ss_pred CceEEEEEeCCHHHH-----HHHHHHHHCCCcEEEEEeC
Confidence 348999998776542 3457777889999876653
No 487
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=20.49 E-value=1.5e+02 Score=29.09 Aligned_cols=58 Identities=9% Similarity=-0.030 Sum_probs=38.2
Q ss_pred cEEEEEcCCCc---cCHHHHHHHHHHHHhCCCeEEEEeCCccccccccCCCCCCCCeEEEE
Q 012194 14 VHCLVLSYPAQ---GHINPLLQFAKRLDHKGLKVTLVTTYFISKSLHRDSSSSSASIALEA 71 (468)
Q Consensus 14 ~~il~~~~~~~---GH~~p~l~La~~L~~rGh~Vt~~~~~~~~~~~~~~~~~~~~~i~f~~ 71 (468)
+|.+|++.|.. |--.-.-+|++.|.+||++|+.+=...+...-...+++..-|-.|..
T Consensus 12 ~~~i~v~gg~~s~~gk~~~~~~~~~~l~~~g~~v~~~k~~py~n~d~~~ms~~~hge~~vt 72 (550)
T 1vco_A 12 RKYVFITGGVVSSLGKGILTSSLGALLRARGYRVTAIKIDPYVNVDAGTMRPYEHGEVFVT 72 (550)
T ss_dssp CEEEEEEECSSSCSCHHHHHHHHHHHHHTTTCCEEEEEEECSSCSSGGGSCSSTTSCCEEC
T ss_pred eeEEEEeCCcccCcchHHHHHHHHHHHHhCCceeeEeecccccccCccccCcccCCceEEC
Confidence 47777775555 44567789999999999999998776554443333334433444543
No 488
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=20.47 E-value=91 Score=26.60 Aligned_cols=32 Identities=28% Similarity=0.315 Sum_probs=22.5
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 15 HCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 15 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
|+++++.++.| + =.+++++|+++|++|+++.-
T Consensus 7 k~vlVTGas~g-I--G~~ia~~l~~~G~~V~~~~r 38 (246)
T 2ag5_A 7 KVIILTAAAQG-I--GQAAALAFAREGAKVIATDI 38 (246)
T ss_dssp CEEEESSTTSH-H--HHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcH-H--HHHHHHHHHHCCCEEEEEEC
Confidence 45566655432 2 25788999999999998764
No 489
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=20.45 E-value=54 Score=27.91 Aligned_cols=30 Identities=23% Similarity=0.296 Sum_probs=23.3
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 15 HCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 15 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
.|+++-.|-.| +.+|..|+++|++|+++=-
T Consensus 4 dV~IIGaGpaG-----L~aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 4 PIAIIGTGIAG-----LSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp CEEEECCSHHH-----HHHHHHHHHTTCCEEEECS
T ss_pred CEEEECcCHHH-----HHHHHHHHHCCCCEEEEEC
Confidence 46666655445 7889999999999999864
No 490
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=20.45 E-value=1e+02 Score=27.11 Aligned_cols=35 Identities=26% Similarity=0.403 Sum_probs=25.8
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
+.|+++++.++.| + =.++|++|+++|++|.++.-.
T Consensus 11 ~~k~vlITGas~G-I--G~~~a~~L~~~G~~V~~~~r~ 45 (311)
T 3o26_A 11 KRRCAVVTGGNKG-I--GFEICKQLSSNGIMVVLTCRD 45 (311)
T ss_dssp -CCEEEESSCSSH-H--HHHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEEecCCch-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 3467788877654 2 247899999999999988754
No 491
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=20.44 E-value=1.1e+02 Score=25.74 Aligned_cols=35 Identities=29% Similarity=0.210 Sum_probs=22.6
Q ss_pred CCcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 12 RLVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 12 ~~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
+.++|++ +.+ .|-+- .+++++|.++|++|+++.-.
T Consensus 6 ~~~~vlV-TGa-sggiG--~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 6 SGLRALV-TGA-GKGIG--RDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp TTCEEEE-EST-TSHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCCEEEE-eCC-CchHH--HHHHHHHHHCCCEEEEEeCC
Confidence 3345544 433 33332 46899999999999887653
No 492
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=20.39 E-value=69 Score=29.29 Aligned_cols=36 Identities=14% Similarity=0.202 Sum_probs=24.4
Q ss_pred CCCcEEEEEcCCCccCHHHHHHHHHHHHh--CCCeEEEEeCC
Q 012194 11 CRLVHCLVLSYPAQGHINPLLQFAKRLDH--KGLKVTLVTTY 50 (468)
Q Consensus 11 ~~~~~il~~~~~~~GH~~p~l~La~~L~~--rGh~Vt~~~~~ 50 (468)
++.|+|++.... |-+- ..|+++|.+ +||+|+.+.-.
T Consensus 8 ~~~~~vlVTGat--G~IG--~~l~~~L~~~~~g~~V~~~~r~ 45 (362)
T 3sxp_A 8 LENQTILITGGA--GFVG--SNLAFHFQENHPKAKVVVLDKF 45 (362)
T ss_dssp CTTCEEEEETTT--SHHH--HHHHHHHHHHCTTSEEEEEECC
T ss_pred cCCCEEEEECCC--CHHH--HHHHHHHHhhCCCCeEEEEECC
Confidence 345677766433 3222 367889999 99999998753
No 493
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=20.37 E-value=1.2e+02 Score=26.25 Aligned_cols=39 Identities=21% Similarity=0.256 Sum_probs=29.6
Q ss_pred cEEE-EEc-CCCccCHHHHHHHHHHHHhCCCeEEEEeCCcc
Q 012194 14 VHCL-VLS-YPAQGHINPLLQFAKRLDHKGLKVTLVTTYFI 52 (468)
Q Consensus 14 ~~il-~~~-~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~~~ 52 (468)
++++ |++ -|+-|=-.-...||..|+++|++|.++=.+..
T Consensus 18 ~~vI~v~s~kGGvGKTT~a~nLA~~la~~G~~VlliD~D~~ 58 (262)
T 2ph1_A 18 KSRIAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDADFL 58 (262)
T ss_dssp SCEEEEECSSSCTTHHHHHHHHHHHHHHTTCCEEEEECCSS
T ss_pred CeEEEEEcCCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 4554 433 34558889999999999999999999876543
No 494
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=20.35 E-value=1e+02 Score=28.25 Aligned_cols=41 Identities=12% Similarity=0.071 Sum_probs=34.0
Q ss_pred CCCcEEEEEcC-CCccCHHHHHHHHHHHH--hCCCeEEEEeCCc
Q 012194 11 CRLVHCLVLSY-PAQGHINPLLQFAKRLD--HKGLKVTLVTTYF 51 (468)
Q Consensus 11 ~~~~~il~~~~-~~~GH~~p~l~La~~L~--~rGh~Vt~~~~~~ 51 (468)
.+.++|+|++. |+-|--.-..+||..|+ ++|++|.++..+.
T Consensus 15 ~~~~~i~~~~gkGGvGKTt~a~~lA~~la~~~~g~~vllid~D~ 58 (348)
T 3io3_A 15 HDSLKWIFVGGKGGVGKTTTSSSVAVQLALAQPNEQFLLISTDP 58 (348)
T ss_dssp CTTCSEEEEECSTTSSHHHHHHHHHHHHHHHCTTSCEEEEECCS
T ss_pred CCCcEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCeEEEEECCC
Confidence 34568877654 56699999999999999 8999999999874
No 495
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=20.34 E-value=97 Score=26.74 Aligned_cols=32 Identities=22% Similarity=0.265 Sum_probs=23.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 15 HCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 15 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
|+++++.++.| + =.+++++|+++|++|.+...
T Consensus 9 k~vlVTGas~G-I--G~aia~~la~~G~~V~~~~~ 40 (259)
T 3edm_A 9 RTIVVAGAGRD-I--GRACAIRFAQEGANVVLTYN 40 (259)
T ss_dssp CEEEEETTTSH-H--HHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCch-H--HHHHHHHHHHCCCEEEEEcC
Confidence 56677766653 2 25789999999999988744
No 496
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=20.31 E-value=94 Score=27.22 Aligned_cols=33 Identities=15% Similarity=0.172 Sum_probs=23.8
Q ss_pred EEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 15 HCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 15 ~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
|+++++.++.| + =.+++++|+++|++|.++.-.
T Consensus 33 k~~lVTGas~G-I--G~aia~~la~~G~~V~~~~r~ 65 (276)
T 3r1i_A 33 KRALITGASTG-I--GKKVALAYAEAGAQVAVAARH 65 (276)
T ss_dssp CEEEEESTTSH-H--HHHHHHHHHHTTCEEEEEESS
T ss_pred CEEEEeCCCCH-H--HHHHHHHHHHCCCEEEEEeCC
Confidence 56666666542 2 257899999999999987753
No 497
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=20.22 E-value=51 Score=29.55 Aligned_cols=33 Identities=12% Similarity=0.014 Sum_probs=26.4
Q ss_pred CcEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEeCC
Q 012194 13 LVHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVTTY 50 (468)
Q Consensus 13 ~~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~~~ 50 (468)
.++|+++..|..| +..|..|+++|++|+++-..
T Consensus 22 ~~~vvIIG~G~aG-----l~aA~~l~~~g~~v~vie~~ 54 (338)
T 3itj_A 22 HNKVTIIGSGPAA-----HTAAIYLARAEIKPILYEGM 54 (338)
T ss_dssp EEEEEEECCSHHH-----HHHHHHHHHTTCCCEEECCS
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEecC
Confidence 4688888777555 67889999999999998753
No 498
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Probab=20.17 E-value=1.1e+02 Score=27.12 Aligned_cols=35 Identities=14% Similarity=0.254 Sum_probs=29.2
Q ss_pred cEEEEEcCCCccCHHHHHHHHHHHHhCCCeEEEEe
Q 012194 14 VHCLVLSYPAQGHINPLLQFAKRLDHKGLKVTLVT 48 (468)
Q Consensus 14 ~~il~~~~~~~GH~~p~l~La~~L~~rGh~Vt~~~ 48 (468)
..++++.+|..|+..-+..+++.|.++|+.|..+-
T Consensus 96 ~p~vv~~HG~~~~~~~~~~~~~~la~~G~~vv~~d 130 (306)
T 3vis_A 96 YGAIAISPGYTGTQSSIAWLGERIASHGFVVIAID 130 (306)
T ss_dssp EEEEEEECCTTCCHHHHHHHHHHHHTTTEEEEEEC
T ss_pred CCEEEEeCCCcCCHHHHHHHHHHHHhCCCEEEEec
Confidence 45677888888888889999999999999887653
No 499
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=20.16 E-value=1.3e+02 Score=22.54 Aligned_cols=32 Identities=9% Similarity=0.014 Sum_probs=24.2
Q ss_pred cEEEEEcC-CCccCHHHHHHHHHHHHhCCCeEEEEeC
Q 012194 14 VHCLVLSY-PAQGHINPLLQFAKRLDHKGLKVTLVTT 49 (468)
Q Consensus 14 ~~il~~~~-~~~GH~~p~l~La~~L~~rGh~Vt~~~~ 49 (468)
.+|+++|. ++ ......+..|.+.||+|..+.+
T Consensus 90 ~~ivvyC~~~G----~rs~~a~~~L~~~G~~v~~l~G 122 (134)
T 3g5j_A 90 DNIVIYCARGG----MRSGSIVNLLSSLGVNVYQLEG 122 (134)
T ss_dssp SEEEEECSSSS----HHHHHHHHHHHHTTCCCEEETT
T ss_pred CeEEEEECCCC----hHHHHHHHHHHHcCCceEEEeC
Confidence 68999984 43 3456788999999998887654
No 500
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=20.08 E-value=1.6e+02 Score=23.64 Aligned_cols=38 Identities=11% Similarity=0.050 Sum_probs=26.7
Q ss_pred cCCCcEEEEEcCCCc-cCHH--HHHHHHHHHHhCCCeEEEE
Q 012194 10 SCRLVHCLVLSYPAQ-GHIN--PLLQFAKRLDHKGLKVTLV 47 (468)
Q Consensus 10 ~~~~~~il~~~~~~~-GH~~--p~l~La~~L~~rGh~Vt~~ 47 (468)
..+++|+.+++.+.- |.+. -...|++.|.+.|++|...
T Consensus 7 ~~~~~~v~Ii~tGdE~g~i~D~n~~~l~~~L~~~G~~v~~~ 47 (172)
T 1mkz_A 7 EFIPTRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHVVDK 47 (172)
T ss_dssp SCCCCEEEEEEECSSCCGGGCHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCEEEEEEEeCCCCcccCccHHHHHHHHHHCCCeEeEE
Confidence 356789998887644 5442 1234899999999998753
Done!