STRING 9.05 
  AT1G68820 protein (Arabidopsis thaliana) - STRING network view
 

This is the evidence view. Different line colors represent the types of evidence for the association.

 
   
Your Input:
AT1G68820
membrane protein, putative; membrane protein, putative; FUNCTIONS IN- protein binding, zinc ion binding; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Zinc finger, RING-type (InterPro-IPR001841); BEST Arabidopsis thaliana protein match is- zinc finger (C3HC4-type RING finger) family protein (TAIR-AT1G73950.1); Has 2228 Blast hits to 2189 proteins in 182 species- Archae - 0; Bacteria - 0; Metazoa - 1400; Fungi - 2; Plants - 302; Viruses - 198; Other Eukaryotes - 326 (source- NCBI BLink). (468 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT5G61530
small G protein family protein / RhoGAP family protein; small G protein family protein / RhoGAP [...] (376 aa)
       0.534
BZIP25
BZIP25 (BASIC LEUCINE ZIPPER 25); protein heterodimerization/ transcription factor; bZIP transc [...] (403 aa)
       0.534
PUB14
PUB14; ubiquitin-protein ligase; Encodes a protein with ubiquitin ligase activity. ; Functions [...] (632 aa)
       0.530
ALDH7B4
ALDH7B4 (Aldehyde Dehydrogenase 7B4); 3-chloroallyl aldehyde dehydrogenase/ oxidoreductase; Ald [...] (508 aa)
       0.528
AML2
AML2 (ARABIDOPSIS-MEI2-LIKE 2); RNA binding / nucleic acid binding / nucleotide binding; A memb [...] (843 aa)
       0.522
HGO
HGO (HOMOGENTISATE 1,2-DIOXYGENASE); homogentisate 1,2-dioxygenase; homogentisate 1,2-dioxygena [...] (461 aa)
       0.517
AT4G21580
oxidoreductase, zinc-binding dehydrogenase family protein; oxidoreductase, zinc-binding dehydro [...] (325 aa)
       0.516
ATBCAT-2
ATBCAT-2 (ARABIDOPSIS THALIANA BRANCHED-CHAIN AMINO ACID TRANSAMINASE 2); branched-chain-amino- [...] (388 aa)
       0.508
WNK4
WNK4 (WITH NO K (=LYSINE) 4); kinase/ protein kinase; Encodes a member of the WNK family (9 mem [...] (571 aa)
       0.502
CSY3
CSY3 (citrate synthase 3); citrate (SI)-synthase; Encodes a peroxisomal citrate synthase that i [...] (509 aa)
       0.499
 
  Views:                    
   Neighborhood  Fusion  Occurence  Coexpression  Experiments  Database  Textmining      Summary Network

 

Info & Parameters ...
Network Display - Nodes are either colored (if they are directly linked to the input - as in the table) or white (nodes of a higher iteration/depth). Edges, i.e. predicted functional links, consist of up to eight lines: one color for each type of evidence. Hover or click to reveal more information about the node/edge.

Active Prediction Methods:
Neighborhood Gene Fusion Co-occurrence
Co-expression Experiments Databases Textmining
 
required confidence (score): interactors shown:
or custom value: or custom limit:

additional (white) nodes

 Server load: very high (>100%)
Permalink