Query 012197
Match_columns 468
No_of_seqs 385 out of 1515
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 04:40:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012197.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012197hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t6p_A Baculoviral IAP repeat- 99.9 1.3E-25 4.5E-30 228.3 4.8 59 302-366 13-72 (345)
2 3hl5_A Baculoviral IAP repeat- 99.6 7.8E-17 2.7E-21 134.3 -0.2 64 313-391 28-92 (95)
3 3mup_A Baculoviral IAP repeat- 99.6 1.1E-16 3.9E-21 138.8 -0.2 79 303-398 28-107 (122)
4 1jd5_A DIAP1, apoptosis 1 inhi 99.6 1.3E-16 4.6E-21 138.5 0.1 74 302-392 33-107 (124)
5 2vm5_A Baculoviral IAP repeat- 99.6 1.5E-16 5E-21 135.1 -0.7 71 302-388 28-99 (106)
6 2i3h_A Baculoviral IAP repeat- 99.6 1.5E-16 5.2E-21 139.4 -1.1 65 312-391 63-128 (133)
7 3d9t_A Baculoviral IAP repeat- 99.6 2.2E-16 7.7E-21 132.1 -0.5 71 303-390 22-93 (97)
8 1g73_C Inhibitors of apoptosis 99.5 6.2E-16 2.1E-20 134.0 -1.0 63 313-390 42-105 (121)
9 2poi_A Baculoviral IAP repeat- 99.5 4.3E-15 1.5E-19 123.4 0.9 52 312-367 36-88 (94)
10 1se0_A Apoptosis 1 inhibitor; 99.5 6.1E-15 2.1E-19 126.9 1.0 56 303-365 23-79 (116)
11 2qfa_A Baculoviral IAP repeat- 99.5 7.7E-15 2.6E-19 131.0 1.5 68 302-384 22-93 (142)
12 2qra_D XIAP, baculoviral IAP r 99.5 8.3E-15 2.8E-19 124.8 0.9 52 312-367 53-105 (111)
13 3m1d_A Baculoviral IAP repeat- 99.4 5.6E-15 1.9E-19 120.5 -0.5 57 303-365 20-77 (85)
14 3siq_A Apoptosis 1 inhibitor; 99.4 2.7E-14 9.3E-19 125.3 1.6 50 313-366 52-102 (136)
15 1i4o_C X-linked IAP, baculovir 99.4 2.7E-14 9.2E-19 126.7 1.6 60 303-368 52-112 (141)
16 2ea5_A Cell growth regulator w 99.4 3.4E-14 1.2E-18 111.2 1.6 54 414-467 11-64 (68)
17 2vje_B MDM4 protein; proto-onc 99.4 1.1E-13 3.8E-18 106.5 2.1 54 415-468 4-63 (63)
18 2yho_A E3 ubiquitin-protein li 99.3 5.8E-13 2E-17 107.2 4.9 50 418-467 18-67 (79)
19 4ic3_A E3 ubiquitin-protein li 99.3 1.4E-12 4.6E-17 103.5 5.0 51 417-467 23-73 (74)
20 2vje_A E3 ubiquitin-protein li 99.3 6.7E-13 2.3E-17 102.4 1.4 51 417-467 7-63 (64)
21 2ecg_A Baculoviral IAP repeat- 99.2 2.9E-12 9.9E-17 101.7 3.3 51 417-467 24-74 (75)
22 4ayc_A E3 ubiquitin-protein li 98.5 5.1E-08 1.7E-12 86.1 4.9 46 417-463 52-101 (138)
23 3fl2_A E3 ubiquitin-protein li 98.5 6E-08 2.1E-12 83.9 3.3 44 417-461 51-99 (124)
24 2ecn_A Ring finger protein 141 98.5 4.1E-08 1.4E-12 76.1 1.6 49 417-467 14-66 (70)
25 1chc_A Equine herpes virus-1 r 98.4 6.8E-08 2.3E-12 74.3 2.3 49 417-466 4-57 (68)
26 2d8t_A Dactylidin, ring finger 98.4 8.8E-08 3E-12 74.6 2.9 44 417-461 14-61 (71)
27 2xeu_A Ring finger protein 4; 98.4 1E-07 3.4E-12 72.1 2.1 49 417-466 2-63 (64)
28 2y1n_A E3 ubiquitin-protein li 98.4 1.7E-07 5.9E-12 96.0 4.0 49 417-466 331-384 (389)
29 2ysl_A Tripartite motif-contai 98.3 1.8E-07 6.2E-12 72.8 2.9 44 417-461 19-69 (73)
30 2ecm_A Ring finger and CHY zin 98.3 2E-07 6.9E-12 68.5 2.4 44 417-461 4-55 (55)
31 3ng2_A RNF4, snurf, ring finge 98.3 1.4E-07 4.9E-12 72.9 1.6 49 417-466 9-70 (71)
32 2csy_A Zinc finger protein 183 98.3 1.9E-07 6.4E-12 74.5 2.2 45 417-462 14-62 (81)
33 1bor_A Transcription factor PM 98.3 1.3E-07 4.4E-12 70.5 0.8 44 417-461 5-49 (56)
34 2ea6_A Ring finger protein 4; 98.3 2.2E-07 7.6E-12 71.2 1.6 44 417-461 14-68 (69)
35 2egp_A Tripartite motif-contai 98.2 3.4E-07 1.2E-11 72.3 2.5 44 417-461 11-65 (79)
36 2djb_A Polycomb group ring fin 98.2 4.1E-07 1.4E-11 70.9 2.9 47 417-464 14-65 (72)
37 2ecw_A Tripartite motif-contai 98.2 6.9E-07 2.3E-11 71.2 3.4 44 417-461 18-71 (85)
38 2ecy_A TNF receptor-associated 98.2 4.1E-07 1.4E-11 69.7 1.9 45 417-462 14-63 (66)
39 1iym_A EL5; ring-H2 finger, ub 98.2 7E-07 2.4E-11 65.6 3.1 43 417-460 4-54 (55)
40 1g25_A CDK-activating kinase a 98.2 4.1E-07 1.4E-11 69.4 1.8 43 418-461 3-55 (65)
41 2ct2_A Tripartite motif protei 98.2 6.3E-07 2.2E-11 72.1 2.6 44 417-461 14-68 (88)
42 2ecv_A Tripartite motif-contai 98.2 6.4E-07 2.2E-11 71.3 2.6 44 417-461 18-71 (85)
43 2kiz_A E3 ubiquitin-protein li 98.2 4.1E-07 1.4E-11 70.1 1.3 47 417-464 13-66 (69)
44 1e4u_A Transcriptional repress 98.2 4.7E-07 1.6E-11 72.3 1.5 49 417-466 10-67 (78)
45 1z6u_A NP95-like ring finger p 98.1 9E-07 3.1E-11 79.4 2.9 45 417-462 77-126 (150)
46 1x4j_A Ring finger protein 38; 98.1 7.9E-07 2.7E-11 69.8 1.3 44 417-461 22-72 (75)
47 2ep4_A Ring finger protein 24; 98.1 1.3E-06 4.3E-11 68.3 2.4 48 417-465 14-68 (74)
48 3lrq_A E3 ubiquitin-protein li 98.1 1.5E-06 5.1E-11 72.4 2.7 44 417-461 21-70 (100)
49 2yur_A Retinoblastoma-binding 98.0 1.6E-06 5.6E-11 67.9 2.7 44 417-461 14-64 (74)
50 2y43_A E3 ubiquitin-protein li 98.0 1.7E-06 6E-11 71.5 2.7 44 417-461 21-69 (99)
51 2ect_A Ring finger protein 126 98.0 1.2E-06 3.9E-11 69.2 1.5 45 417-462 14-65 (78)
52 1jm7_A BRCA1, breast cancer ty 98.0 1.5E-06 5.1E-11 73.2 2.2 44 417-461 20-70 (112)
53 2l0b_A E3 ubiquitin-protein li 98.0 1.5E-06 5.2E-11 71.0 2.1 44 417-461 39-89 (91)
54 3l11_A E3 ubiquitin-protein li 98.0 1.7E-06 5.9E-11 73.6 2.1 43 418-461 15-62 (115)
55 3ztg_A E3 ubiquitin-protein li 98.0 2.5E-06 8.6E-11 69.4 2.4 42 417-459 12-60 (92)
56 2ckl_A Polycomb group ring fin 97.9 3.3E-06 1.1E-10 71.0 2.9 45 417-462 14-63 (108)
57 1t1h_A Gspef-atpub14, armadill 97.9 2.8E-06 9.7E-11 66.9 2.3 44 417-461 7-55 (78)
58 1jm7_B BARD1, BRCA1-associated 97.9 5.2E-06 1.8E-10 70.9 2.8 44 417-461 21-67 (117)
59 2ysj_A Tripartite motif-contai 97.8 6.8E-06 2.3E-10 62.0 2.6 38 417-455 19-63 (63)
60 2ecj_A Tripartite motif-contai 97.8 5.3E-06 1.8E-10 61.3 1.9 38 417-455 14-58 (58)
61 3hct_A TNF receptor-associated 97.8 6.4E-06 2.2E-10 70.4 2.5 44 417-461 17-65 (118)
62 2ckl_B Ubiquitin ligase protei 97.8 5.7E-06 1.9E-10 74.9 2.2 44 417-461 53-102 (165)
63 1rmd_A RAG1; V(D)J recombinati 97.8 7.9E-06 2.7E-10 69.5 2.1 43 418-461 23-70 (116)
64 4ap4_A E3 ubiquitin ligase RNF 97.7 9E-06 3.1E-10 70.0 1.5 44 417-461 6-60 (133)
65 1v87_A Deltex protein 2; ring- 97.6 1.6E-05 5.4E-10 67.2 1.2 43 419-462 26-95 (114)
66 2ecl_A Ring-box protein 2; RNF 97.6 3.1E-05 1.1E-09 61.8 2.8 43 418-461 15-76 (81)
67 4ap4_A E3 ubiquitin ligase RNF 97.5 2.3E-05 7.9E-10 67.3 1.9 49 417-466 71-132 (133)
68 3knv_A TNF receptor-associated 97.5 1.7E-05 5.9E-10 70.2 0.2 42 417-459 30-76 (141)
69 3hcs_A TNF receptor-associated 97.3 7E-05 2.4E-09 67.9 2.5 44 417-461 17-65 (170)
70 2kr4_A Ubiquitin conjugation f 97.3 9.9E-05 3.4E-09 59.5 2.5 44 417-461 13-60 (85)
71 2kre_A Ubiquitin conjugation f 97.3 9.9E-05 3.4E-09 61.5 2.4 44 417-461 28-75 (100)
72 1wgm_A Ubiquitin conjugation f 97.2 0.00013 4.4E-09 60.6 2.6 44 417-461 21-69 (98)
73 2c2l_A CHIP, carboxy terminus 97.1 0.00015 5.1E-09 70.1 2.4 44 417-461 207-255 (281)
74 3dpl_R Ring-box protein 1; ubi 97.0 0.00032 1.1E-08 59.0 3.0 42 418-460 37-100 (106)
75 3vk6_A E3 ubiquitin-protein li 97.0 0.00042 1.4E-08 57.3 3.4 44 421-465 4-53 (101)
76 2f42_A STIP1 homology and U-bo 96.6 0.00084 2.9E-08 61.7 2.6 44 417-461 105-153 (179)
77 2yu4_A E3 SUMO-protein ligase 96.5 0.00093 3.2E-08 54.7 2.3 41 417-458 6-59 (94)
78 4a0k_B E3 ubiquitin-protein li 96.5 0.00042 1.4E-08 59.4 0.0 41 418-459 48-110 (117)
79 1wim_A KIAA0161 protein; ring 96.3 0.00064 2.2E-08 55.4 0.1 41 417-458 4-61 (94)
80 2d8s_A Cellular modulator of i 96.1 0.0026 9E-08 50.6 2.8 46 417-463 14-72 (80)
81 3htk_C E3 SUMO-protein ligase 95.3 0.005 1.7E-07 59.7 1.6 44 417-461 180-232 (267)
82 2bay_A PRE-mRNA splicing facto 93.5 0.03 1E-06 42.0 1.9 42 419-461 4-50 (61)
83 1vyx_A ORF K3, K3RING; zinc-bi 90.6 0.12 4.1E-06 38.6 2.2 44 417-460 5-58 (60)
84 2ko5_A Ring finger protein Z; 87.1 0.21 7.1E-06 40.7 1.4 46 418-465 28-77 (99)
85 3k1l_B Fancl; UBC, ring, RWD, 83.7 0.21 7.2E-06 50.2 -0.1 45 417-462 307-374 (381)
86 2ct0_A Non-SMC element 1 homol 78.4 1.7 5.8E-05 33.7 3.5 45 417-462 14-65 (74)
87 2jun_A Midline-1; B-BOX, TRIM, 72.2 1.2 4E-05 36.1 1.1 30 418-448 3-35 (101)
88 2cs3_A Protein C14ORF4, MY039 67.0 1.4 4.7E-05 34.8 0.4 31 417-448 14-48 (93)
89 3pwf_A Rubrerythrin; non heme 30.4 22 0.00075 31.8 2.1 32 430-465 138-169 (170)
90 2zet_C Melanophilin; complex, 24.3 26 0.0009 30.8 1.4 41 417-458 67-117 (153)
91 3nw0_A Non-structural maintena 23.5 57 0.002 30.6 3.7 45 417-462 179-230 (238)
No 1
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=99.91 E-value=1.3e-25 Score=228.32 Aligned_cols=59 Identities=14% Similarity=0.177 Sum_probs=52.5
Q ss_pred hheeeecceeeeccCCCCccc-ceeccCCccceeceeccCCcccccCCCCCCcHHHHhhhcccccc
Q 012197 302 FAVYRLLEKIYLLVHSGPAFG-YWSIASKARDCLGFMHHGSRLLGWWSIDEGSREELAGLYCAETK 366 (468)
Q Consensus 302 f~~~~~~e~~~~~~~~~a~aG-~~~~~~d~~~Cf~~~~c~~~L~~~W~~~d~p~~eha~~~p~C~~ 366 (468)
|.-|+.- ..+.+++||+|| ||+|.+|.|+|| +||++|.+ |+++||||+||+|++|.|.+
T Consensus 13 F~~WP~~--~~~~~~~lA~AGFyy~g~~D~v~Cf---~C~~~l~~-We~~DdP~~eH~~~~p~C~f 72 (345)
T 3t6p_A 13 FMYWPSS--VPVQPEQLASAGFYYVGRNDDVKCF---SCDGGLRC-WESGDDPWVEHAKWFPRCEF 72 (345)
T ss_dssp GGGSCTT--CSSCHHHHHHTTEEECSSTTCEEET---TTCCEECC-CCTTCCHHHHHHHHCTTCHH
T ss_pred HhhCCCc--ccCCHHHHHhCCCeecCCCCeEEec---CCCCCccC-CCCCCCHHHHHHHhCCCCcc
Confidence 4456643 246778999999 999999999999 99999999 99999999999999999994
No 2
>3hl5_A Baculoviral IAP repeat-containing protein 4; BIR, apoptosis, small molecule drug discovery, structur drug design, ligase, metal-binding; HET: 9JZ; 1.80A {Homo sapiens} PDB: 1nw9_A 2vsl_A
Probab=99.59 E-value=7.8e-17 Score=134.27 Aligned_cols=64 Identities=20% Similarity=0.257 Sum_probs=59.9
Q ss_pred eccCCCCccc-ceeccCCccceeceeccCCcccccCCCCCCcHHHHhhhccccccccccCCCChhhhccCCCCchhhHHH
Q 012197 313 LLVHSGPAFG-YWSIASKARDCLGFMHHGSRLLGWWSIDEGSREELAGLYCAETKISGYNTFPPEIVKKMPKSGLIDEIW 391 (468)
Q Consensus 313 ~~~~~~a~aG-~~~~~~d~~~Cf~~~~c~~~L~~~W~~~d~p~~eha~~~p~C~~~sg~~t~~~e~Vk~~K~~e~~~~~~ 391 (468)
+.+++||+|| ||+|.+|.++|| +|+++|.+ |+++||||+||+|++|.|. ++...|+++++++++
T Consensus 28 ~~~~~LA~AGFyy~g~~D~v~Cf---~C~~~l~~-We~~DdP~~eH~r~~p~C~-----------f~~~~kg~~fv~~i~ 92 (95)
T 3hl5_A 28 VNKEQLARAGFYALGEGDKVKCF---HCGGGLTD-WKPSEDPWEQHAKWYPGCK-----------YLLEQKGQEYINNIH 92 (95)
T ss_dssp SCHHHHHHTTEEECSSTTCEEET---TTCCEECC-CCTTCCHHHHHHHHCTTCH-----------HHHHHTCHHHHHHHT
T ss_pred CCHHHHHhCCCeEcCCCCeEEec---CCCCCccC-cCCCCCHHHHHHHHCcCCc-----------chHhhccHHHHHHHH
Confidence 5678999999 999999999999 99999999 9999999999999999999 999999999987553
No 3
>3mup_A Baculoviral IAP repeat-containing protein 2; zinc-finger motif, apoptosis inhibitor; HET: SMK; 2.60A {Homo sapiens} SCOP: g.52.1.1 PDB: 3oz1_A* 4eb9_A*
Probab=99.58 E-value=1.1e-16 Score=138.80 Aligned_cols=79 Identities=15% Similarity=0.182 Sum_probs=67.7
Q ss_pred heeeecceeeeccCCCCccc-ceeccCCccceeceeccCCcccccCCCCCCcHHHHhhhccccccccccCCCChhhhccC
Q 012197 303 AVYRLLEKIYLLVHSGPAFG-YWSIASKARDCLGFMHHGSRLLGWWSIDEGSREELAGLYCAETKISGYNTFPPEIVKKM 381 (468)
Q Consensus 303 ~~~~~~e~~~~~~~~~a~aG-~~~~~~d~~~Cf~~~~c~~~L~~~W~~~d~p~~eha~~~p~C~~~sg~~t~~~e~Vk~~ 381 (468)
.-|+.- ..+.+++||+|| ||+|.+|.|+|| +|+++|.+ |+++||||+||+|++|.|. ++..+
T Consensus 28 ~~WP~~--~~~~p~~LA~AGFyy~g~~D~V~Cf---~C~~~L~~-We~~DdP~~EH~r~~P~C~-----------Fv~~~ 90 (122)
T 3mup_A 28 MYWPSS--VPVQPEQLASAGFYYVGRNDDVKCF---CCDGGLRC-WESGDDPWVEHAKWFPRCE-----------FLIRM 90 (122)
T ss_dssp GGCCTT--CSSCHHHHHHTTEEECSSTTCEEET---TTCCEECC-CCTTCCHHHHHHHHCTTCH-----------HHHHH
T ss_pred hcCCCc--ccCCHHHHHHCCCeEeCCCCeEEec---CcCCEecC-CCCCCCHHHHHHHHCcCCc-----------chhhc
Confidence 445543 235678999999 999999999999 99999999 9999999999999999999 99999
Q ss_pred CCCchhhHHHHHHHhhh
Q 012197 382 PKSGLIDEIWKLQAALS 398 (468)
Q Consensus 382 K~~e~~~~~~~lq~~~~ 398 (468)
|++++++++....+.+.
T Consensus 91 kg~~fi~~i~~~~~~~~ 107 (122)
T 3mup_A 91 KGQEFVDEIQGRYPHLL 107 (122)
T ss_dssp HCHHHHHHHHHHCTTHH
T ss_pred CcHHHHHHHHHhchhhh
Confidence 99999988775544433
No 4
>1jd5_A DIAP1, apoptosis 1 inhibitor; IAP, caspase activation; 1.90A {Drosophila melanogaster} SCOP: g.52.1.1 PDB: 1jd4_A 1jd6_A 1q4q_A
Probab=99.58 E-value=1.3e-16 Score=138.50 Aligned_cols=74 Identities=19% Similarity=0.243 Sum_probs=64.1
Q ss_pred hheeeecceeeeccCCCCccc-ceeccCCccceeceeccCCcccccCCCCCCcHHHHhhhccccccccccCCCChhhhcc
Q 012197 302 FAVYRLLEKIYLLVHSGPAFG-YWSIASKARDCLGFMHHGSRLLGWWSIDEGSREELAGLYCAETKISGYNTFPPEIVKK 380 (468)
Q Consensus 302 f~~~~~~e~~~~~~~~~a~aG-~~~~~~d~~~Cf~~~~c~~~L~~~W~~~d~p~~eha~~~p~C~~~sg~~t~~~e~Vk~ 380 (468)
|..|+.-. ...+++||+|| ||+|.+|.|+|| +||++|.+ |+++||||+||+|++|.|. +++.
T Consensus 33 F~~WP~~~--~~~p~~LA~AGFyYtg~~D~V~Cf---~C~~~L~~-We~~DdP~~EH~r~~P~C~-----------Fv~~ 95 (124)
T 1jd5_A 33 FEAWPRNL--KQKPHQLAEAGFFYTGVGDRVRCF---SCGGGLMD-WNDNDEPWEQHALWLSQCR-----------FVKL 95 (124)
T ss_dssp GGGCCTTC--SSCHHHHHHTTEEECSSTTCEEET---TTCCEEEC-CCTTCCHHHHHHHHCTTCH-----------HHHH
T ss_pred HhhCCCCc--cCCHHHHHHcCCCCcCCCCEEEec---CCCCEecC-CCCCCCHHHHHHHHCcCCc-----------eeec
Confidence 33565533 24578999999 999999999999 99999999 9999999999999999999 9999
Q ss_pred CCCCchhhHHHH
Q 012197 381 MPKSGLIDEIWK 392 (468)
Q Consensus 381 ~K~~e~~~~~~~ 392 (468)
+|++++++++..
T Consensus 96 ~kg~~fv~~v~~ 107 (124)
T 1jd5_A 96 MKGQLYIDTVAA 107 (124)
T ss_dssp HHCHHHHHHHHH
T ss_pred ccchHHHHHHHh
Confidence 999988876654
No 5
>2vm5_A Baculoviral IAP repeat-containing protein 1; apoptosis; 1.80A {Homo sapiens}
Probab=99.57 E-value=1.5e-16 Score=135.05 Aligned_cols=71 Identities=14% Similarity=0.188 Sum_probs=60.9
Q ss_pred hheeeecceeeeccCCCCccc-ceeccCCccceeceeccCCcccccCCCCCCcHHHHhhhccccccccccCCCChhhhcc
Q 012197 302 FAVYRLLEKIYLLVHSGPAFG-YWSIASKARDCLGFMHHGSRLLGWWSIDEGSREELAGLYCAETKISGYNTFPPEIVKK 380 (468)
Q Consensus 302 f~~~~~~e~~~~~~~~~a~aG-~~~~~~d~~~Cf~~~~c~~~L~~~W~~~d~p~~eha~~~p~C~~~sg~~t~~~e~Vk~ 380 (468)
|..|+.-.+ ...+++||+|| ||+|.+|.|+|| +||++|.+ |+++||||+||+|++|.|. +++.
T Consensus 28 F~~WP~~~~-~~~p~~LA~AGFyy~g~~D~V~Cf---~C~~~L~~-We~~DdP~~eH~r~~p~C~-----------Fv~~ 91 (106)
T 2vm5_A 28 FRNWPFYVQ-GISPCVLSEAGFVFTGKQDTVQCF---SCGGCLGN-WEEGDDPWKEHAKWFPKCE-----------FLRS 91 (106)
T ss_dssp GGGCCGGGT-TSCHHHHHHTTEEECSSTTCEEET---TTCCEEES-CCTTCCHHHHHHHHCTTCH-----------HHHH
T ss_pred HhcCCCCcc-cCCHHHHHHcCCCCcCCCCEEEcc---ccCCEecC-CCCCCCHHHHHHHHCcCCc-----------chhh
Confidence 345666544 34578999999 999999999999 99999999 9999999999999999999 7777
Q ss_pred CCCCchhh
Q 012197 381 MPKSGLID 388 (468)
Q Consensus 381 ~K~~e~~~ 388 (468)
.|+.++++
T Consensus 92 ~Kg~~~i~ 99 (106)
T 2vm5_A 92 KKSSEEIT 99 (106)
T ss_dssp HHCCTTSC
T ss_pred ccCHHHHH
Confidence 77777754
No 6
>2i3h_A Baculoviral IAP repeat-containing protein 7; zinc binding, peptide complex, apoptosis inhibition, peptidomimetic, small molecule, drug design, inhibitor/apoptosis complex; HET: BTB; 1.62A {Homo sapiens} SCOP: g.52.1.1 PDB: 2i3i_A* 3f7h_A* 3f7i_A* 3gt9_A* 3gta_A* 1tw6_A* 3uw5_A* 3f7g_A* 1oxn_A* 1oxq_A* 1oy7_A*
Probab=99.56 E-value=1.5e-16 Score=139.42 Aligned_cols=65 Identities=14% Similarity=0.156 Sum_probs=60.0
Q ss_pred eeccCCCCccc-ceeccCCccceeceeccCCcccccCCCCCCcHHHHhhhccccccccccCCCChhhhccCCCCchhhHH
Q 012197 312 YLLVHSGPAFG-YWSIASKARDCLGFMHHGSRLLGWWSIDEGSREELAGLYCAETKISGYNTFPPEIVKKMPKSGLIDEI 390 (468)
Q Consensus 312 ~~~~~~~a~aG-~~~~~~d~~~Cf~~~~c~~~L~~~W~~~d~p~~eha~~~p~C~~~sg~~t~~~e~Vk~~K~~e~~~~~ 390 (468)
...+++||+|| ||+|.+|.|+|| +|+++|.+ |+++||||+||+|++|.|. ++...|++++++++
T Consensus 63 ~~~pe~LA~AGFYYtg~~D~V~Cf---~C~~~L~~-We~~DDP~~EH~r~~P~C~-----------Fv~~~Kg~~fv~~v 127 (133)
T 2i3h_A 63 EVPPELLAAAGFFHTGHQDKVRCF---FCYGGLQS-WKRGDDPWTEHAKWFPGCQ-----------FLLRSKGQEYINNI 127 (133)
T ss_dssp TSCHHHHHHTTEEECSSTTCEEET---TTCCEEEC-CCTTCCHHHHHHHHCTTCH-----------HHHHHHCHHHHHHH
T ss_pred CCCHHHHHHcCCCCcCCCCEEEec---ccCCEeCC-CCCCCCHHHHHHHHCcCCc-----------eehhcccHHHHHHH
Confidence 35577999999 999999999999 99999999 9999999999999999999 99999999998765
Q ss_pred H
Q 012197 391 W 391 (468)
Q Consensus 391 ~ 391 (468)
.
T Consensus 128 ~ 128 (133)
T 2i3h_A 128 H 128 (133)
T ss_dssp C
T ss_pred h
Confidence 4
No 7
>3d9t_A Baculoviral IAP repeat-containing protein 2; zinc finger, apoptosis, cytoplasm, metal-binding, polymorphism, zinc, zinc-finger, alternative splicing, hydrolase, protease; 1.50A {Homo sapiens} SCOP: g.52.1.1 PDB: 3d9u_A 3uw4_A* 2uvl_A
Probab=99.56 E-value=2.2e-16 Score=132.06 Aligned_cols=71 Identities=15% Similarity=0.208 Sum_probs=62.0
Q ss_pred heeeecceeeeccCCCCccc-ceeccCCccceeceeccCCcccccCCCCCCcHHHHhhhccccccccccCCCChhhhccC
Q 012197 303 AVYRLLEKIYLLVHSGPAFG-YWSIASKARDCLGFMHHGSRLLGWWSIDEGSREELAGLYCAETKISGYNTFPPEIVKKM 381 (468)
Q Consensus 303 ~~~~~~e~~~~~~~~~a~aG-~~~~~~d~~~Cf~~~~c~~~L~~~W~~~d~p~~eha~~~p~C~~~sg~~t~~~e~Vk~~ 381 (468)
.-|+.-. ...+++||+|| ||+|.+|.++|| +|+++|.+ |+++||||+||+|++|.|. ++..+
T Consensus 22 ~~Wp~~~--~~~~~~LA~AGFyy~g~~D~v~Cf---~C~~~l~~-We~~Ddp~~eH~r~~p~C~-----------f~~~~ 84 (97)
T 3d9t_A 22 MYWPSSV--PVQPEQLASAGFYYVGRNDDVKCF---CCDGGLRC-WESGDDPWVEHAKWFPRCE-----------FLIRM 84 (97)
T ss_dssp GGCCTTS--SSCHHHHHHTTEEECSSTTCEEET---TTCCEEEC-CCTTCCHHHHHHHHCTTBH-----------HHHHH
T ss_pred hcCCCcc--cCCHHHHHHcCCCCcCCCCEEEec---CcCCEecC-CCCCCCHHHHHHHhCccCh-----------hhHhh
Confidence 3455432 34577999999 999999999999 99999999 9999999999999999999 99999
Q ss_pred CCCchhhHH
Q 012197 382 PKSGLIDEI 390 (468)
Q Consensus 382 K~~e~~~~~ 390 (468)
|++++++++
T Consensus 85 kg~~~v~~~ 93 (97)
T 3d9t_A 85 KGQEFVDEI 93 (97)
T ss_dssp HCHHHHHHH
T ss_pred ccHHHHHHH
Confidence 999987655
No 8
>1g73_C Inhibitors of apoptosis-like protein ILP; helix bundle, zinc-binding domain, apoptosis/apoptosis inhibitor complex; 2.00A {Homo sapiens} SCOP: g.52.1.1 PDB: 3cm2_D* 3clx_D* 3cm7_C* 1f9x_A 1g3f_A 1tfq_A* 1tft_A* 3eyl_A* 3g76_A* 2jk7_A* 2opz_A 2opy_A* 1xb0_A 1xb1_A
Probab=99.52 E-value=6.2e-16 Score=134.04 Aligned_cols=63 Identities=21% Similarity=0.266 Sum_probs=57.1
Q ss_pred eccCCCCccc-ceeccCCccceeceeccCCcccccCCCCCCcHHHHhhhccccccccccCCCChhhhccCCCCchhhHH
Q 012197 313 LLVHSGPAFG-YWSIASKARDCLGFMHHGSRLLGWWSIDEGSREELAGLYCAETKISGYNTFPPEIVKKMPKSGLIDEI 390 (468)
Q Consensus 313 ~~~~~~a~aG-~~~~~~d~~~Cf~~~~c~~~L~~~W~~~d~p~~eha~~~p~C~~~sg~~t~~~e~Vk~~K~~e~~~~~ 390 (468)
..+++||+|| ||+|.+|.|+|| +|+++|.+ |+++||||+||+|++|.|. ++...|+.++++.+
T Consensus 42 ~~p~~LA~AGFyy~g~~D~V~Cf---~C~~~L~~-We~~DdP~~eH~r~~P~C~-----------Fv~~~kg~~~v~~v 105 (121)
T 1g73_C 42 VNKEQLARAGFYALGEGDKVKCF---HCGGGLTD-WKPSEDPWEQHAKWYPGCK-----------YLLEQKGQEYINNI 105 (121)
T ss_dssp SCHHHHHHTTEEECSSTTCEEET---TTCCEEES-CCTTCCHHHHHHHHCTTCH-----------HHHHHHHHHHHHHH
T ss_pred CCHHHHHHcCCCCcCCCCEEEcC---cCCCCcCC-CCCCCCHHHHHHHHCcCCc-----------chhhccchhhhccc
Confidence 5577999999 999999999999 99999999 9999999999999999999 88887777776544
No 9
>2poi_A Baculoviral IAP repeat-containing protein 4; zinc finger, signaling protein/apoptosis complex; 1.80A {Homo sapiens} PDB: 2pop_B
Probab=99.48 E-value=4.3e-15 Score=123.37 Aligned_cols=52 Identities=8% Similarity=0.078 Sum_probs=48.4
Q ss_pred eeccCCCCccc-ceeccCCccceeceeccCCcccccCCCCCCcHHHHhhhccccccc
Q 012197 312 YLLVHSGPAFG-YWSIASKARDCLGFMHHGSRLLGWWSIDEGSREELAGLYCAETKI 367 (468)
Q Consensus 312 ~~~~~~~a~aG-~~~~~~d~~~Cf~~~~c~~~L~~~W~~~d~p~~eha~~~p~C~~~ 367 (468)
...+++||+|| ||+|.+|.|+|| +||++|.+ |+++||||+||+|++|.|.++
T Consensus 36 ~~~p~~LA~AGFyytg~~D~V~Cf---~C~~~l~~-We~~DdP~~eH~r~~P~C~Fv 88 (94)
T 2poi_A 36 PVSASTLARAGFLYTGEGDTVRCF---SCHAAVDR-WQYGDSAVGRHRKVSPNCRFI 88 (94)
T ss_dssp SSCHHHHHHTTEEECSSTTCEEET---TTCCEECC-CCTTCCHHHHHHHHCTTCTTT
T ss_pred cCCHHHHHHcCCCCcCCCCEEEcc---cCCCEeCC-CCCCCCHHHHHHHHCccCccc
Confidence 35678999999 999999999999 99999999 999999999999999999943
No 10
>1se0_A Apoptosis 1 inhibitor; apoptosis, IAP, BIR, caspase; 1.75A {Drosophila melanogaster} SCOP: g.52.1.1 PDB: 1sdz_A 3sip_E
Probab=99.47 E-value=6.1e-15 Score=126.92 Aligned_cols=56 Identities=16% Similarity=0.237 Sum_probs=50.4
Q ss_pred heeeecceeeeccCCCCccc-ceeccCCccceeceeccCCcccccCCCCCCcHHHHhhhccccc
Q 012197 303 AVYRLLEKIYLLVHSGPAFG-YWSIASKARDCLGFMHHGSRLLGWWSIDEGSREELAGLYCAET 365 (468)
Q Consensus 303 ~~~~~~e~~~~~~~~~a~aG-~~~~~~d~~~Cf~~~~c~~~L~~~W~~~d~p~~eha~~~p~C~ 365 (468)
..|+.- ...+++||+|| ||+|.+|.|+|| +||++|.+ |+++||||+||+|++|.|.
T Consensus 23 ~~WP~~---~~~~~~LA~AGFyy~g~~D~V~Cf---~C~~~L~~-We~~DdP~~eH~r~~p~C~ 79 (116)
T 1se0_A 23 TDWPLD---WLDKRQLAQTGMYFTHAGDKVKCF---FCGVEIGS-WEQEDQPVPEHQRWSPNCP 79 (116)
T ss_dssp TTCCCT---TSCHHHHHHTTEEECSSTTCEEET---TTCCEEES-CCTTCCHHHHHHHHCTTCT
T ss_pred hhCCCC---cCCHHHHHHcCCcCcCCCCEEEec---CcCCEecC-CCCCCCHHHHHHHHCccCc
Confidence 346552 24578999999 999999999999 99999999 9999999999999999999
No 11
>2qfa_A Baculoviral IAP repeat-containing protein 5; three-helical-bundle, long helix, protein complex, alternative splicing, apoptosis, cell cycle, cell division; HET: MES; 1.40A {Homo sapiens} SCOP: g.52.1.1 PDB: 1e31_A* 4a0i_A 4a0j_A* 4a0n_A* 2raw_A 3uec_A* 3ued_A* 3uef_A 3uig_A* 3uih_A 3uii_A 1f3h_A 3uee_A 3ueg_A* 3uei_A 3ueh_A* 3uik_A 3uij_A 1m4m_A 2rax_A ...
Probab=99.46 E-value=7.7e-15 Score=130.99 Aligned_cols=68 Identities=16% Similarity=0.171 Sum_probs=59.0
Q ss_pred hheeeecceeeeccCCCCccc-ceeccC---CccceeceeccCCcccccCCCCCCcHHHHhhhccccccccccCCCChhh
Q 012197 302 FAVYRLLEKIYLLVHSGPAFG-YWSIAS---KARDCLGFMHHGSRLLGWWSIDEGSREELAGLYCAETKISGYNTFPPEI 377 (468)
Q Consensus 302 f~~~~~~e~~~~~~~~~a~aG-~~~~~~---d~~~Cf~~~~c~~~L~~~W~~~d~p~~eha~~~p~C~~~sg~~t~~~e~ 377 (468)
|..|+.-....+.+++||+|| ||+|.+ |.|+|| +||++|.+ |+++||||+||+|++|.|. +
T Consensus 22 F~~WP~~~~~~~~p~~LA~AGFyy~g~~~~~D~V~Cf---~C~~~L~~-We~~DdP~~EH~r~~p~C~-----------F 86 (142)
T 2qfa_A 22 FKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCF---FCFKELEG-WEPDDDPIEEHKKHSSGCA-----------F 86 (142)
T ss_dssp CCSCSCCSSCSSCHHHHHHTTEEECCBTTBTTCEEET---TTCCEECC-CCTTCCHHHHHHHHCTTCG-----------G
T ss_pred HhcCCccCCcCCCHHHHHHcCCCcCCCCCCCCEEEcC---CCCCEecc-cCCCCCHHHHHHHHCcCCc-----------c
Confidence 345777665556788999999 999987 999999 99999999 9999999999999999999 6
Q ss_pred hccCCCC
Q 012197 378 VKKMPKS 384 (468)
Q Consensus 378 Vk~~K~~ 384 (468)
+...|++
T Consensus 87 ~~~~k~~ 93 (142)
T 2qfa_A 87 LSVKKQF 93 (142)
T ss_dssp GGCCSCG
T ss_pred eeccccc
Confidence 6666654
No 12
>2qra_D XIAP, baculoviral IAP repeat-containing protein 4, inhibitor; apoptosis, signaling protein, zinc binding; 2.50A {Homo sapiens}
Probab=99.45 E-value=8.3e-15 Score=124.79 Aligned_cols=52 Identities=8% Similarity=0.078 Sum_probs=48.3
Q ss_pred eeccCCCCccc-ceeccCCccceeceeccCCcccccCCCCCCcHHHHhhhccccccc
Q 012197 312 YLLVHSGPAFG-YWSIASKARDCLGFMHHGSRLLGWWSIDEGSREELAGLYCAETKI 367 (468)
Q Consensus 312 ~~~~~~~a~aG-~~~~~~d~~~Cf~~~~c~~~L~~~W~~~d~p~~eha~~~p~C~~~ 367 (468)
...+++||+|| ||+|.+|.|+|| +||++|.+ |+++||||+||+|++|.|.++
T Consensus 53 ~~~p~~LA~AGFyYtg~~D~V~Cf---~C~~~L~~-We~~DdP~~eH~r~sP~C~Fv 105 (111)
T 2qra_D 53 PVSASTLARAGFLYTGEGDTVRCF---SCHAAVDR-WQYGDSAVGRHRKVSPNCRFI 105 (111)
T ss_dssp SSCHHHHHHTTEEECSSTTCEEET---TTCCEECC-CCTTCCHHHHHHHHCTTCTTT
T ss_pred cCCHHHHHHcCCCCcCCCCEEEcc---cCCCEeCC-CCCCCCHHHHHHHHCccCcch
Confidence 34577999999 999999999999 99999999 999999999999999999943
No 13
>3m1d_A Baculoviral IAP repeat-containing protein 2; BIR, apoptosis, cytoplasm, polymorphism, zinc, zinc-FIN metal binding protein; 2.00A {Homo sapiens} PDB: 3m0a_D 3m0d_D
Probab=99.45 E-value=5.6e-15 Score=120.52 Aligned_cols=57 Identities=16% Similarity=0.286 Sum_probs=50.9
Q ss_pred heeeecceeeeccCCCCccc-ceeccCCccceeceeccCCcccccCCCCCCcHHHHhhhccccc
Q 012197 303 AVYRLLEKIYLLVHSGPAFG-YWSIASKARDCLGFMHHGSRLLGWWSIDEGSREELAGLYCAET 365 (468)
Q Consensus 303 ~~~~~~e~~~~~~~~~a~aG-~~~~~~d~~~Cf~~~~c~~~L~~~W~~~d~p~~eha~~~p~C~ 365 (468)
..|+.- ....+++||+|| ||+|.+|.++|| +|+++|.+ |+++||||+||+|++|.|.
T Consensus 20 ~~WP~~--~~~~~~~LA~AGFyy~g~~D~v~Cf---~C~~~l~~-We~~DdP~~eH~~~~p~C~ 77 (85)
T 3m1d_A 20 STFPAG--VPVSERSLARAGFYYTGVNDKVKCF---CCGLMLDN-WKLGDSPIQKHKQLYPSCS 77 (85)
T ss_dssp GGCCTT--CSSCHHHHHHTTEEECSSTTCEEET---TTCCEECS-CCTTCCHHHHHHHHCTTCH
T ss_pred hcCCCC--CcCCHHHHHHCCCeEeCCCCEEEeC---CcCCEecC-CCCCCCHHHHHHHHCccCc
Confidence 345442 346678999999 999999999999 99999999 9999999999999999999
No 14
>3siq_A Apoptosis 1 inhibitor; DIAP1-BIR1 domain, ligase; 2.40A {Drosophila melanogaster}
Probab=99.42 E-value=2.7e-14 Score=125.25 Aligned_cols=50 Identities=16% Similarity=0.218 Sum_probs=47.6
Q ss_pred eccCCCCccc-ceeccCCccceeceeccCCcccccCCCCCCcHHHHhhhcccccc
Q 012197 313 LLVHSGPAFG-YWSIASKARDCLGFMHHGSRLLGWWSIDEGSREELAGLYCAETK 366 (468)
Q Consensus 313 ~~~~~~a~aG-~~~~~~d~~~Cf~~~~c~~~L~~~W~~~d~p~~eha~~~p~C~~ 366 (468)
..+++||+|| ||+|.+|.++|| +||++|.+ |+++||||+||+|++|.|.+
T Consensus 52 ~~p~~LA~AGFYYtG~~D~V~Cf---~C~~~L~~-We~~DdP~~EH~r~sP~C~F 102 (136)
T 3siq_A 52 LDKRQLAQTGMYFTHAGDKVKCF---FCGVEIGS-WEQEDQPVPEHQRWSPNCPL 102 (136)
T ss_dssp SCHHHHHHTTEEECSSTTCEEET---TTCCEEEC-CCTTCCHHHHHHHHCTTCTT
T ss_pred CCHHHHHHCCCeEcCCCCeEEEe---ccCCEecC-CCCCCCHHHHHHHHCcCCcc
Confidence 4578999999 999999999999 99999999 99999999999999999993
No 15
>1i4o_C X-linked IAP, baculoviral IAP repeat-containing protein 4; protease-inhibitor, apoptosis-hydrolase complex; 2.40A {Homo sapiens} PDB: 1kmc_C 1i51_E 1i3o_E 1c9q_A
Probab=99.42 E-value=2.7e-14 Score=126.69 Aligned_cols=60 Identities=13% Similarity=0.172 Sum_probs=52.2
Q ss_pred heeeecceeeeccCCCCccc-ceeccCCccceeceeccCCcccccCCCCCCcHHHHhhhcccccccc
Q 012197 303 AVYRLLEKIYLLVHSGPAFG-YWSIASKARDCLGFMHHGSRLLGWWSIDEGSREELAGLYCAETKIS 368 (468)
Q Consensus 303 ~~~~~~e~~~~~~~~~a~aG-~~~~~~d~~~Cf~~~~c~~~L~~~W~~~d~p~~eha~~~p~C~~~s 368 (468)
..|+.-. ...+++||+|| ||+|.+|.|+|| +||++|.+ |+++||||+||+|++|.|.++.
T Consensus 52 ~~WP~~~--~~~p~~LA~AGFyY~g~~D~V~Cf---~C~~~L~~-We~~DdP~~EH~r~~P~C~Fv~ 112 (141)
T 1i4o_C 52 QNWPDYA--HLTPRELASAGLYYTGIGDQVQCF---CCGGKLKN-WEPCDRAWSEHRRHFPNCFFVL 112 (141)
T ss_pred hcCCCCc--cCCHHHHHHcCCcCcCCCCEEEec---cCCCEecC-CCCCCCHHHHHHHHCcCCcccC
Confidence 3455432 35678999999 999999999999 99999999 9999999999999999999544
No 16
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.41 E-value=3.4e-14 Score=111.16 Aligned_cols=54 Identities=33% Similarity=0.850 Sum_probs=50.2
Q ss_pred hhhcccccccccccccceEEecCCCcccChhhHHcCCCCCCCcccccCeeeeec
Q 012197 414 LQTEKILCRICFEEQINILLLPCRHHILCRTCGEKCKKCPICRVFIEERLPIYD 467 (468)
Q Consensus 414 ~~~~~~~C~IC~~~~~~vv~~PCgH~~~C~~Ca~~l~~CPiCR~~I~~~ikiy~ 467 (468)
.+++...|+||+++.++++++||||.++|..|+...++||+||++|...+++|.
T Consensus 11 ~~~~~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~~~~~CP~CR~~i~~~~~i~~ 64 (68)
T 2ea5_A 11 SEENSKDCVVCQNGTVNWVLLPCRHTCLCDGCVKYFQQCPMCRQFVQESFALSG 64 (68)
T ss_dssp SCCCSSCCSSSSSSCCCCEETTTTBCCSCTTHHHHCSSCTTTCCCCCCEECCCS
T ss_pred cCCCCCCCCCcCcCCCCEEEECCCChhhhHHHHhcCCCCCCCCcchhceEEeec
Confidence 444567999999999999999999999999999999999999999999999985
No 17
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=99.37 E-value=1.1e-13 Score=106.54 Aligned_cols=54 Identities=22% Similarity=0.511 Sum_probs=48.3
Q ss_pred hhcccccccccccccceEEe--cCCCcccChhhHHcCC----CCCCCcccccCeeeeecC
Q 012197 415 QTEKILCRICFEEQINILLL--PCRHHILCRTCGEKCK----KCPICRVFIEERLPIYDV 468 (468)
Q Consensus 415 ~~~~~~C~IC~~~~~~vv~~--PCgH~~~C~~Ca~~l~----~CPiCR~~I~~~ikiy~~ 468 (468)
++....|+||+++.++.+++ ||||.++|.+|+.++. +||+||++|++.+++|.+
T Consensus 4 ~~~~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~~~i~i~~s 63 (63)
T 2vje_B 4 QNLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQLVIKVFIA 63 (63)
T ss_dssp GGGGSBCTTTSSSBSCEEEEETTEEEEEECHHHHHHHHHTTCBCTTTCCBCCEEEEEEEC
T ss_pred CCcCCCCcccCCcCCCeEEEecCCCCHhHHHHHHHHHHHhCCcCCCcCchhhceEEEecC
Confidence 34456899999999998888 9999999999999975 899999999999999964
No 18
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=99.34 E-value=5.8e-13 Score=107.19 Aligned_cols=50 Identities=36% Similarity=0.931 Sum_probs=47.5
Q ss_pred ccccccccccccceEEecCCCcccChhhHHcCCCCCCCcccccCeeeeec
Q 012197 418 KILCRICFEEQINILLLPCRHHILCRTCGEKCKKCPICRVFIEERLPIYD 467 (468)
Q Consensus 418 ~~~C~IC~~~~~~vv~~PCgH~~~C~~Ca~~l~~CPiCR~~I~~~ikiy~ 467 (468)
...|+||+++.++++++||||.++|.+|+.+.+.||+||++|.+.+++|.
T Consensus 18 ~~~C~IC~~~~~~~v~~pCgH~~~C~~C~~~~~~CP~Cr~~i~~~~~i~~ 67 (79)
T 2yho_A 18 AMLCMVCCEEEINSTFCPCGHTVCCESCAAQLQSCPVCRSRVEHVQHVYL 67 (79)
T ss_dssp HTBCTTTSSSBCCEEEETTCBCCBCHHHHTTCSBCTTTCCBCCEEEECBC
T ss_pred CCEeEEeCcccCcEEEECCCCHHHHHHHHHhcCcCCCCCchhhCeEEEEe
Confidence 34899999999999999999999999999999999999999999999985
No 19
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=99.31 E-value=1.4e-12 Score=103.51 Aligned_cols=51 Identities=37% Similarity=0.948 Sum_probs=48.0
Q ss_pred cccccccccccccceEEecCCCcccChhhHHcCCCCCCCcccccCeeeeec
Q 012197 417 EKILCRICFEEQINILLLPCRHHILCRTCGEKCKKCPICRVFIEERLPIYD 467 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~PCgH~~~C~~Ca~~l~~CPiCR~~I~~~ikiy~ 467 (468)
+...|.||+++.++.+++||||.++|.+|+.+..+||+||+++++.+++|.
T Consensus 23 ~~~~C~iC~~~~~~~~~~pCgH~~~C~~C~~~~~~CP~Cr~~i~~~~~i~~ 73 (74)
T 4ic3_A 23 EEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCPMCYTVITFKQKILM 73 (74)
T ss_dssp HHTBCTTTSSSBCCEEEETTCCBCCCHHHHTTCSBCTTTCCBCSEEEECBC
T ss_pred cCCCCCCCCCCCCCEEEcCCCChhHHHHhhhcCccCCCcCcCccCcEEEee
Confidence 345899999999999999999999999999999999999999999999985
No 20
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=99.27 E-value=6.7e-13 Score=102.42 Aligned_cols=51 Identities=31% Similarity=0.544 Sum_probs=46.7
Q ss_pred cccccccccccccceEEe--cCCCcccChhhHHcC----CCCCCCcccccCeeeeec
Q 012197 417 EKILCRICFEEQINILLL--PCRHHILCRTCGEKC----KKCPICRVFIEERLPIYD 467 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~--PCgH~~~C~~Ca~~l----~~CPiCR~~I~~~ikiy~ 467 (468)
++..|+||+++.++++++ ||||.++|.+|+.++ ++||+||++|++.+++|.
T Consensus 7 ~~~~C~IC~~~~~~~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~~~i~i~~ 63 (64)
T 2vje_A 7 AIEPCVICQGRPKNGCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQMIVLTYF 63 (64)
T ss_dssp GGSCCTTTSSSCSCEEEEETTEEEEEECHHHHHHHHHTTCCCTTTCCCCCEEEEEEC
T ss_pred CcCCCCcCCCCCCCEEEECCCCCChhhHHHHHHHHHHcCCcCCCcCcchhceEeeec
Confidence 445899999999999998 999999999999987 359999999999999996
No 21
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.23 E-value=2.9e-12 Score=101.74 Aligned_cols=51 Identities=37% Similarity=0.981 Sum_probs=47.8
Q ss_pred cccccccccccccceEEecCCCcccChhhHHcCCCCCCCcccccCeeeeec
Q 012197 417 EKILCRICFEEQINILLLPCRHHILCRTCGEKCKKCPICRVFIEERLPIYD 467 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~PCgH~~~C~~Ca~~l~~CPiCR~~I~~~ikiy~ 467 (468)
+...|+||+++.++.+++||||.++|.+|+.+..+||+||++++..+++|.
T Consensus 24 ~~~~C~IC~~~~~~~~~~pCgH~~~C~~C~~~~~~CP~Cr~~i~~~~~i~~ 74 (75)
T 2ecg_A 24 EEKLCKICMDRNIAIVFVPCGHLVTCKQCAEAVDKCPMCYTVITFKQKIFM 74 (75)
T ss_dssp HHHSCSSSCSSCCCBCCSSSCCCCBCHHHHHHCSBCTTTCCBCCCCCBCCC
T ss_pred CCCCCCcCCCCCCCEEEecCCCHHHHHHHhhCCCCCccCCceecCcEEEec
Confidence 345899999999999999999999999999999999999999999999985
No 22
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=98.54 E-value=5.1e-08 Score=86.09 Aligned_cols=46 Identities=35% Similarity=0.770 Sum_probs=39.8
Q ss_pred cccccccccccccceEEecCCCcccChhhHHcC----CCCCCCcccccCee
Q 012197 417 EKILCRICFEEQINILLLPCRHHILCRTCGEKC----KKCPICRVFIEERL 463 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~PCgH~~~C~~Ca~~l----~~CPiCR~~I~~~i 463 (468)
+...|.||++...+.+.+||||. +|..|.... ..||+||+++....
T Consensus 52 ~~~~C~iC~~~~~~~~~~~CgH~-fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 101 (138)
T 4ayc_A 52 NELQCIICSEYFIEAVTLNCAHS-FCSYCINEWMKRKIECPICRKDIKSKT 101 (138)
T ss_dssp HHSBCTTTCSBCSSEEEETTSCE-EEHHHHHHHTTTCSBCTTTCCBCCCEE
T ss_pred ccCCCcccCcccCCceECCCCCC-ccHHHHHHHHHcCCcCCCCCCcCCCCC
Confidence 34589999999999999999997 999998863 67999999997653
No 23
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=98.47 E-value=6e-08 Score=83.87 Aligned_cols=44 Identities=27% Similarity=0.707 Sum_probs=38.6
Q ss_pred cccccccccccccceEEecCCCcccChhhHHcC-----CCCCCCcccccC
Q 012197 417 EKILCRICFEEQINILLLPCRHHILCRTCGEKC-----KKCPICRVFIEE 461 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~PCgH~~~C~~Ca~~l-----~~CPiCR~~I~~ 461 (468)
+...|.||++...+.+.+||||. +|..|.... ..||+||+++..
T Consensus 51 ~~~~C~IC~~~~~~p~~~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 51 ETFQCICCQELVFRPITTVCQHN-VCKDCLDRSFRAQVFSCPACRYDLGR 99 (124)
T ss_dssp HHTBCTTTSSBCSSEEECTTSCE-EEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred cCCCCCcCChHHcCcEEeeCCCc-ccHHHHHHHHhHCcCCCCCCCccCCC
Confidence 44689999999999999999999 999998753 489999999876
No 24
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.45 E-value=4.1e-08 Score=76.08 Aligned_cols=49 Identities=33% Similarity=0.868 Sum_probs=42.3
Q ss_pred cccccccccccccceEEecCCCcccChhhHHcC----CCCCCCcccccCeeeeec
Q 012197 417 EKILCRICFEEQINILLLPCRHHILCRTCGEKC----KKCPICRVFIEERLPIYD 467 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~PCgH~~~C~~Ca~~l----~~CPiCR~~I~~~ikiy~ 467 (468)
+...|.||++...+ +.+||||. +|.+|..+. ..||+||+++....++|.
T Consensus 14 ~~~~C~IC~~~~~~-~~~~CgH~-fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~ 66 (70)
T 2ecn_A 14 DEEECCICMDGRAD-LILPCAHS-FCQKCIDKWSDRHRNCPICRLQMTGANESSG 66 (70)
T ss_dssp CCCCCSSSCCSCCS-EEETTTEE-ECHHHHHHSSCCCSSCHHHHHCTTCCCCCCC
T ss_pred CCCCCeeCCcCccC-cccCCCCc-ccHHHHHHHHHCcCcCCCcCCcccCCCcccc
Confidence 44689999999988 88899999 999999864 679999999998776654
No 25
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=98.43 E-value=6.8e-08 Score=74.28 Aligned_cols=49 Identities=33% Similarity=0.775 Sum_probs=41.4
Q ss_pred cccccccccccccc-eEEecCCCcccChhhHHc----CCCCCCCcccccCeeeee
Q 012197 417 EKILCRICFEEQIN-ILLLPCRHHILCRTCGEK----CKKCPICRVFIEERLPIY 466 (468)
Q Consensus 417 ~~~~C~IC~~~~~~-vv~~PCgH~~~C~~Ca~~----l~~CPiCR~~I~~~ikiy 466 (468)
+...|.||++...+ ++.+||||. +|..|..+ -..||+||+++...++.+
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~C~H~-fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~ 57 (68)
T 1chc_A 4 VAERCPICLEDPSNYSMALPCLHA-FCYVCITRWIRQNPTCPLCKVPVESVVHTI 57 (68)
T ss_dssp CCCCCSSCCSCCCSCEEETTTTEE-ESTTHHHHHHHHSCSTTTTCCCCCCEECCC
T ss_pred CCCCCeeCCccccCCcEecCCCCe-eHHHHHHHHHhCcCcCcCCChhhHhhhhcc
Confidence 45689999999888 588999999 99999876 378999999998876543
No 26
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.42 E-value=8.8e-08 Score=74.59 Aligned_cols=44 Identities=34% Similarity=0.827 Sum_probs=39.1
Q ss_pred cccccccccccccceEEecCCCcccChhhHHcC----CCCCCCcccccC
Q 012197 417 EKILCRICFEEQINILLLPCRHHILCRTCGEKC----KKCPICRVFIEE 461 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~PCgH~~~C~~Ca~~l----~~CPiCR~~I~~ 461 (468)
+...|.||++...+.+.+||||. +|.+|..+. .+||+||+++..
T Consensus 14 ~~~~C~IC~~~~~~~~~~~CgH~-fC~~Ci~~~~~~~~~CP~Cr~~~~~ 61 (71)
T 2d8t_A 14 TVPECAICLQTCVHPVSLPCKHV-FCYLCVKGASWLGKRCALCRQEIPE 61 (71)
T ss_dssp SCCBCSSSSSBCSSEEEETTTEE-EEHHHHHHCTTCSSBCSSSCCBCCH
T ss_pred CCCCCccCCcccCCCEEccCCCH-HHHHHHHHHHHCCCcCcCcCchhCH
Confidence 45689999999999999999999 999999874 579999999874
No 27
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=98.38 E-value=1e-07 Score=72.09 Aligned_cols=49 Identities=33% Similarity=0.789 Sum_probs=39.6
Q ss_pred cccccccccccccce-------EEecCCCcccChhhHHcC----CCCCCCcccccC--eeeee
Q 012197 417 EKILCRICFEEQINI-------LLLPCRHHILCRTCGEKC----KKCPICRVFIEE--RLPIY 466 (468)
Q Consensus 417 ~~~~C~IC~~~~~~v-------v~~PCgH~~~C~~Ca~~l----~~CPiCR~~I~~--~ikiy 466 (468)
+...|.||++...+. +..||||. +|.+|..+. .+||+||+++.. ..++|
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~-fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~~ 63 (64)
T 2xeu_A 2 AMVSCPICMDGYSEIVQNGRLIVSTECGHV-FCSQCLRDSLKNANTCPTCRKKINHKRYHPIY 63 (64)
T ss_dssp CCCBCTTTCCBHHHHHHTTCCEEEETTSCE-EEHHHHHHHHHHCSBCTTTCCBCTTTCEEECC
T ss_pred CCCCCCccChhhhCccccCCCEEeCCCCCc-hhHHHHHHHHHcCCCCCCCCccCCccceeeee
Confidence 345899999986654 78899999 999999763 689999999874 56665
No 28
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=98.36 E-value=1.7e-07 Score=96.01 Aligned_cols=49 Identities=35% Similarity=0.817 Sum_probs=42.5
Q ss_pred cccccccccccccceEEecCCCcccChhhHHc-----CCCCCCCcccccCeeeee
Q 012197 417 EKILCRICFEEQINILLLPCRHHILCRTCGEK-----CKKCPICRVFIEERLPIY 466 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~PCgH~~~C~~Ca~~-----l~~CPiCR~~I~~~ikiy 466 (468)
+...|.||++...+.+.+||||. +|..|..+ ...||+||+++.....+.
T Consensus 331 ~~~~C~ICle~~~~pv~lpCGH~-FC~~Ci~~wl~~~~~~CP~CR~~i~~~~~i~ 384 (389)
T 2y1n_A 331 TFQLCKICAENDKDVKIEPCGHL-MCTSCLTSWQESEGQGCPFCRCEIKGTEPIV 384 (389)
T ss_dssp SSSBCTTTSSSBCCEEEETTCCE-ECHHHHHHHHHHTCSBCTTTCCBCCEEEECS
T ss_pred CCCCCCccCcCCCCeEEeCCCCh-hhHHHHHHHHhcCCCCCCCCCCccCCceeEe
Confidence 34689999999999999999999 79999874 478999999999876653
No 29
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.34 E-value=1.8e-07 Score=72.80 Aligned_cols=44 Identities=27% Similarity=0.836 Sum_probs=38.5
Q ss_pred cccccccccccccceEEecCCCcccChhhHHcC-------CCCCCCcccccC
Q 012197 417 EKILCRICFEEQINILLLPCRHHILCRTCGEKC-------KKCPICRVFIEE 461 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~PCgH~~~C~~Ca~~l-------~~CPiCR~~I~~ 461 (468)
+...|.||++...+.+.+||||. +|.+|..+. ..||+||+++..
T Consensus 19 ~~~~C~IC~~~~~~~~~~~CgH~-fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 69 (73)
T 2ysl_A 19 EEVICPICLDILQKPVTIDCGHN-FCLKCITQIGETSCGFFKCPLCKTSVRK 69 (73)
T ss_dssp CCCBCTTTCSBCSSEEECTTCCE-EEHHHHHHHCSSSCSCCCCSSSCCCCCC
T ss_pred cCCEeccCCcccCCeEEcCCCCh-hhHHHHHHHHHcCCCCCCCCCCCCcCCc
Confidence 45689999999999999999999 999999874 269999999865
No 30
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=98.31 E-value=2e-07 Score=68.45 Aligned_cols=44 Identities=36% Similarity=0.718 Sum_probs=36.8
Q ss_pred cccccccccccccc----eEEecCCCcccChhhHHcC----CCCCCCcccccC
Q 012197 417 EKILCRICFEEQIN----ILLLPCRHHILCRTCGEKC----KKCPICRVFIEE 461 (468)
Q Consensus 417 ~~~~C~IC~~~~~~----vv~~PCgH~~~C~~Ca~~l----~~CPiCR~~I~~ 461 (468)
+...|.||++.-.+ ++.+||||. +|.+|..+. ..||+||+++.+
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~CgH~-fc~~Ci~~~~~~~~~CP~Cr~~~~g 55 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLPCGHL-LHRTCYEEMLKEGYRCPLCSGPSSG 55 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECTTSCE-EETTHHHHHHHHTCCCTTSCCSSCC
T ss_pred CCCcCcccChhhcCCCcCeEecCCCCc-ccHHHHHHHHHcCCcCCCCCCcCCC
Confidence 34589999998644 888999997 999998874 789999998864
No 31
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=98.31 E-value=1.4e-07 Score=72.90 Aligned_cols=49 Identities=33% Similarity=0.794 Sum_probs=39.5
Q ss_pred cccccccccccccce-------EEecCCCcccChhhHHcC----CCCCCCcccccC--eeeee
Q 012197 417 EKILCRICFEEQINI-------LLLPCRHHILCRTCGEKC----KKCPICRVFIEE--RLPIY 466 (468)
Q Consensus 417 ~~~~C~IC~~~~~~v-------v~~PCgH~~~C~~Ca~~l----~~CPiCR~~I~~--~ikiy 466 (468)
+...|.||++...+. +.+||||. +|.+|..+. ..||+||+++.. ..++|
T Consensus 9 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~-fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~~ 70 (71)
T 3ng2_A 9 GTVSCPICMDGYSEIVQNGRLIVSTECGHV-FCSQCLRDSLKNANTCPTCRKKINHKRYHPIY 70 (71)
T ss_dssp TCCBCTTTCCBHHHHHTTTCCEEECTTSCE-EEHHHHHHHHHHCSBCTTTCCBCCCCSCCCCC
T ss_pred CCCCCcccChhhhccccccCCeEeCCCCCh-HhHHHHHHHHHcCCCCCCCCCccChhheeecc
Confidence 456899999986664 88899998 999999763 689999999874 34554
No 32
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.30 E-value=1.9e-07 Score=74.53 Aligned_cols=45 Identities=27% Similarity=0.567 Sum_probs=39.3
Q ss_pred cccccccccccccceEEecCCCcccChhhHHcC----CCCCCCcccccCe
Q 012197 417 EKILCRICFEEQINILLLPCRHHILCRTCGEKC----KKCPICRVFIEER 462 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~PCgH~~~C~~Ca~~l----~~CPiCR~~I~~~ 462 (468)
+...|.||++...+.+.+||||. +|..|..+. ..||+||+++...
T Consensus 14 ~~~~C~IC~~~~~~p~~~~CgH~-fC~~Ci~~~~~~~~~CP~Cr~~~~~~ 62 (81)
T 2csy_A 14 IPFRCFICRQAFQNPVVTKCRHY-FCESCALEHFRATPRCYICDQPTGGI 62 (81)
T ss_dssp CCSBCSSSCSBCCSEEECTTSCE-EEHHHHHHHHHHCSBCSSSCCBCCSC
T ss_pred CCCCCcCCCchhcCeeEccCCCH-hHHHHHHHHHHCCCcCCCcCcccccc
Confidence 45689999999999999999998 899999764 6799999998743
No 33
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.28 E-value=1.3e-07 Score=70.48 Aligned_cols=44 Identities=36% Similarity=0.730 Sum_probs=38.6
Q ss_pred cccccccccccccceEEecCCCcccChhhHHcC-CCCCCCcccccC
Q 012197 417 EKILCRICFEEQINILLLPCRHHILCRTCGEKC-KKCPICRVFIEE 461 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~PCgH~~~C~~Ca~~l-~~CPiCR~~I~~ 461 (468)
+...|.||++...+.+.+||||. +|..|..+. .+||+||+++..
T Consensus 5 ~~~~C~IC~~~~~~p~~l~CgH~-fC~~Ci~~~~~~CP~Cr~~~~~ 49 (56)
T 1bor_A 5 QFLRCQQCQAEAKCPKLLPCLHT-LCSGCLEASGMQCPICQAPWPL 49 (56)
T ss_dssp CCSSCSSSCSSCBCCSCSTTSCC-SBTTTCSSSSSSCSSCCSSSSC
T ss_pred cCCCceEeCCccCCeEEcCCCCc-ccHHHHccCCCCCCcCCcEeec
Confidence 45689999999999999999998 999998764 579999998864
No 34
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.26 E-value=2.2e-07 Score=71.24 Aligned_cols=44 Identities=30% Similarity=0.765 Sum_probs=37.1
Q ss_pred cccccccccccccce-------EEecCCCcccChhhHHcC----CCCCCCcccccC
Q 012197 417 EKILCRICFEEQINI-------LLLPCRHHILCRTCGEKC----KKCPICRVFIEE 461 (468)
Q Consensus 417 ~~~~C~IC~~~~~~v-------v~~PCgH~~~C~~Ca~~l----~~CPiCR~~I~~ 461 (468)
+...|.||++...+. +.+||||. +|.+|..+. ..||+||+++..
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~-fc~~Ci~~~~~~~~~CP~Cr~~~~~ 68 (69)
T 2ea6_A 14 GTVSCPICMDGYSEIVQNGRLIVSTECGHV-FCSQCLRDSLKNANTCPTCRKKINH 68 (69)
T ss_dssp CCCCCTTTCCCHHHHTTTTCCEEECSSSCE-EEHHHHHHHHHHCSSCTTTCCCCCC
T ss_pred CCCCCcccCccccccccccCCeEeCCCCCh-hcHHHHHHHHHcCCCCCCCCCccCc
Confidence 456899999986664 88899997 999999864 689999999865
No 35
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=98.24 E-value=3.4e-07 Score=72.28 Aligned_cols=44 Identities=36% Similarity=0.796 Sum_probs=38.1
Q ss_pred cccccccccccccceEEecCCCcccChhhHHc-----------CCCCCCCcccccC
Q 012197 417 EKILCRICFEEQINILLLPCRHHILCRTCGEK-----------CKKCPICRVFIEE 461 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~PCgH~~~C~~Ca~~-----------l~~CPiCR~~I~~ 461 (468)
+...|.||++...+.+.+||||. +|.+|..+ ...||+||+++..
T Consensus 11 ~~~~C~IC~~~~~~p~~l~CgH~-fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~ 65 (79)
T 2egp_A 11 EEVTCPICLELLTEPLSLDCGHS-LCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65 (79)
T ss_dssp CCCEETTTTEECSSCCCCSSSCC-CCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCS
T ss_pred cCCCCcCCCcccCCeeECCCCCH-HHHHHHHHHHHhcccCCCCCCcCCCCCCcCCH
Confidence 45689999999999888999998 99999985 3479999998864
No 36
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.24 E-value=4.1e-07 Score=70.95 Aligned_cols=47 Identities=30% Similarity=0.822 Sum_probs=39.3
Q ss_pred cccccccccccccceEEe-cCCCcccChhhHHc----CCCCCCCcccccCeee
Q 012197 417 EKILCRICFEEQINILLL-PCRHHILCRTCGEK----CKKCPICRVFIEERLP 464 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~-PCgH~~~C~~Ca~~----l~~CPiCR~~I~~~ik 464 (468)
+...|.||++...+.+.+ ||||. +|.+|..+ -..||+||+++.....
T Consensus 14 ~~~~C~IC~~~~~~p~~~~~CgH~-fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 65 (72)
T 2djb_A 14 PYILCSICKGYLIDATTITECLHT-FCKSCIVRHFYYSNRCPKCNIVVHQTQP 65 (72)
T ss_dssp GGGSCTTTSSCCSSCEECSSSCCE-ECHHHHHHHHHHCSSCTTTCCCCCSSCS
T ss_pred CCCCCCCCChHHHCcCEECCCCCH-HHHHHHHHHHHcCCcCCCcCcccCcccc
Confidence 345899999999888776 99998 89999875 3689999999886543
No 37
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.20 E-value=6.9e-07 Score=71.16 Aligned_cols=44 Identities=34% Similarity=0.749 Sum_probs=38.3
Q ss_pred cccccccccccccceEEecCCCcccChhhHHc----------CCCCCCCcccccC
Q 012197 417 EKILCRICFEEQINILLLPCRHHILCRTCGEK----------CKKCPICRVFIEE 461 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~PCgH~~~C~~Ca~~----------l~~CPiCR~~I~~ 461 (468)
+...|.||++...+.+.+||||. +|..|..+ ...||+||+++..
T Consensus 18 ~~~~C~IC~~~~~~p~~~~CgH~-fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecw_A 18 EEVTCPICLELLKEPVSADCNHS-FCRACITLNYESNRNTDGKGNCPVCRVPYPF 71 (85)
T ss_dssp TTTSCTTTCSCCSSCEECTTSCC-BCHHHHHHHHHHSBCTTSCBCCTTTCCCCCT
T ss_pred cCCCCcCCChhhCcceeCCCCCH-HHHHHHHHHHHhccCCCCCCCCCCCCCcCCH
Confidence 34589999999999999999998 99999876 4579999998874
No 38
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.20 E-value=4.1e-07 Score=69.66 Aligned_cols=45 Identities=24% Similarity=0.541 Sum_probs=38.7
Q ss_pred cccccccccccccceEEecCCCcccChhhHHcC-----CCCCCCcccccCe
Q 012197 417 EKILCRICFEEQINILLLPCRHHILCRTCGEKC-----KKCPICRVFIEER 462 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~PCgH~~~C~~Ca~~l-----~~CPiCR~~I~~~ 462 (468)
+...|.||++...+.+.+||||. +|.+|..+. .+||+||+++...
T Consensus 14 ~~~~C~IC~~~~~~p~~~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 63 (66)
T 2ecy_A 14 DKYKCEKCHLVLCSPKQTECGHR-FCESCMAALLSSSSPKCTACQESIVKD 63 (66)
T ss_dssp CCEECTTTCCEESSCCCCSSSCC-CCHHHHHHHHTTSSCCCTTTCCCCCTT
T ss_pred cCCCCCCCChHhcCeeECCCCCH-HHHHHHHHHHHhCcCCCCCCCcCCChh
Confidence 45689999999999888999999 999998853 5799999998753
No 39
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=98.19 E-value=7e-07 Score=65.56 Aligned_cols=43 Identities=28% Similarity=0.807 Sum_probs=35.5
Q ss_pred cccccccccccccc---eEEec-CCCcccChhhHHcC----CCCCCCccccc
Q 012197 417 EKILCRICFEEQIN---ILLLP-CRHHILCRTCGEKC----KKCPICRVFIE 460 (468)
Q Consensus 417 ~~~~C~IC~~~~~~---vv~~P-CgH~~~C~~Ca~~l----~~CPiCR~~I~ 460 (468)
+...|.||++...+ ++.+| |||. +|.+|..+. ..||+||+++.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~C~H~-f~~~Ci~~w~~~~~~CP~Cr~~~~ 54 (55)
T 1iym_A 4 DGVECAVCLAELEDGEEARFLPRCGHG-FHAECVDMWLGSHSTCPLCRLTVV 54 (55)
T ss_dssp CSCCCTTTCCCCCTTSCCEECSSSCCE-ECTTHHHHTTTTCCSCSSSCCCSC
T ss_pred CCCcCccCCccccCCCceEECCCCCCc-ccHHHHHHHHHcCCcCcCCCCEeE
Confidence 44589999998665 77777 9998 999999873 67999999864
No 40
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.19 E-value=4.1e-07 Score=69.40 Aligned_cols=43 Identities=26% Similarity=0.595 Sum_probs=34.4
Q ss_pred ccccccccc-cccce----EEecCCCcccChhhHHcC-----CCCCCCcccccC
Q 012197 418 KILCRICFE-EQINI----LLLPCRHHILCRTCGEKC-----KKCPICRVFIEE 461 (468)
Q Consensus 418 ~~~C~IC~~-~~~~v----v~~PCgH~~~C~~Ca~~l-----~~CPiCR~~I~~ 461 (468)
+..|.||++ ...+. +.+||||. +|.+|..+. ..||+||+++..
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 55 (65)
T 1g25_A 3 DQGCPRCKTTKYRNPSLKLMVNVCGHT-LCESCVDLLFVRGAGNCPECGTPLRK 55 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEECTTCCC-EEHHHHHHHHHTTSSSCTTTCCCCSS
T ss_pred CCcCCcCCCCccCCCccCeecCCCCCH-hHHHHHHHHHHcCCCcCCCCCCcccc
Confidence 458999999 33332 66899998 999998875 569999999875
No 41
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.17 E-value=6.3e-07 Score=72.13 Aligned_cols=44 Identities=39% Similarity=0.831 Sum_probs=37.5
Q ss_pred cccccccccccccc----eEEecCCCcccChhhHHcC-------CCCCCCcccccC
Q 012197 417 EKILCRICFEEQIN----ILLLPCRHHILCRTCGEKC-------KKCPICRVFIEE 461 (468)
Q Consensus 417 ~~~~C~IC~~~~~~----vv~~PCgH~~~C~~Ca~~l-------~~CPiCR~~I~~ 461 (468)
+...|.||++...+ .+.+||||. +|..|..+. .+||+||+++..
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~~CgH~-fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 68 (88)
T 2ct2_A 14 EVLECPICMESFTEEQLRPKLLHCGHT-ICRQCLEKLLASSINGVRCPFCSKITRI 68 (88)
T ss_dssp SCCBCTTTCCBCCTTSSCEEECSSSCE-EEHHHHHHHHHHCSSCBCCTTTCCCBCC
T ss_pred CCCCCccCCccccccCCCeEECCCCCh-hhHHHHHHHHHcCCCCcCCCCCCCcccc
Confidence 45689999999887 889999998 999998864 579999997654
No 42
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.17 E-value=6.4e-07 Score=71.32 Aligned_cols=44 Identities=34% Similarity=0.844 Sum_probs=38.3
Q ss_pred cccccccccccccceEEecCCCcccChhhHHc----------CCCCCCCcccccC
Q 012197 417 EKILCRICFEEQINILLLPCRHHILCRTCGEK----------CKKCPICRVFIEE 461 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~PCgH~~~C~~Ca~~----------l~~CPiCR~~I~~ 461 (468)
+...|.||++...+.+.+||||. +|.+|..+ ..+||+||+++..
T Consensus 18 ~~~~C~IC~~~~~~p~~~~CgH~-fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecv_A 18 EEVTCPICLELLTQPLSLDCGHS-FCQACLTANHKKSMLDKGESSCPVCRISYQP 71 (85)
T ss_dssp CCCCCTTTCSCCSSCBCCSSSCC-BCTTHHHHHHHHHHHTTSCCCCTTTCCSSCS
T ss_pred CCCCCCCCCcccCCceeCCCCCH-HHHHHHHHHHHHhhcCCCCCcCCCCCCccCH
Confidence 44689999999999888999998 99999876 4679999998874
No 43
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=98.16 E-value=4.1e-07 Score=70.10 Aligned_cols=47 Identities=43% Similarity=0.876 Sum_probs=37.9
Q ss_pred cccccccccccc---cceEEecCCCcccChhhHHcC----CCCCCCcccccCeee
Q 012197 417 EKILCRICFEEQ---INILLLPCRHHILCRTCGEKC----KKCPICRVFIEERLP 464 (468)
Q Consensus 417 ~~~~C~IC~~~~---~~vv~~PCgH~~~C~~Ca~~l----~~CPiCR~~I~~~ik 464 (468)
+...|.||++.- ..++.+||||. +|..|..+. ..||+||+++.....
T Consensus 13 ~~~~C~IC~~~~~~~~~~~~~~C~H~-fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 66 (69)
T 2kiz_A 13 TEEKCTICLSILEEGEDVRRLPCMHL-FHQVCVDQWLITNKKCPICRVDIEAQLP 66 (69)
T ss_dssp CCCSBTTTTBCCCSSSCEEECTTSCE-EEHHHHHHHHHHCSBCTTTCSBSCSCCC
T ss_pred CCCCCeeCCccccCCCcEEEeCCCCH-HHHHHHHHHHHcCCCCcCcCccccCcCC
Confidence 456899997653 56788899999 999998863 679999999887543
No 44
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=98.15 E-value=4.7e-07 Score=72.34 Aligned_cols=49 Identities=31% Similarity=0.775 Sum_probs=39.0
Q ss_pred cccccccccccc--cceEEec--CCCcccChhhHHcC-----CCCCCCcccccCeeeee
Q 012197 417 EKILCRICFEEQ--INILLLP--CRHHILCRTCGEKC-----KKCPICRVFIEERLPIY 466 (468)
Q Consensus 417 ~~~~C~IC~~~~--~~vv~~P--CgH~~~C~~Ca~~l-----~~CPiCR~~I~~~ikiy 466 (468)
+...|.||++.. .+..+.| |||. +|..|..+. ..||.||+++......|
T Consensus 10 ~~~~CpICle~~~~~d~~~~p~~CGH~-fC~~Cl~~~~~~~~~~CP~CR~~~~~~~~~~ 67 (78)
T 1e4u_A 10 DPVECPLCMEPLEIDDINFFPCTCGYQ-ICRFCWHRIRTDENGLCPACRKPYPEDPAVY 67 (78)
T ss_dssp CCCBCTTTCCBCCTTTTTCCSSTTSCC-CCHHHHHHHTTSSCSBCTTTCCBCSSCSSCC
T ss_pred cCCcCCccCccCccccccccccCCCCC-cCHHHHHHHHhcCCCCCCCCCCccCCCchhh
Confidence 456899999975 4566777 9998 999998875 46999999998765444
No 45
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=98.12 E-value=9e-07 Score=79.37 Aligned_cols=45 Identities=24% Similarity=0.668 Sum_probs=39.2
Q ss_pred cccccccccccccceEEecCCCcccChhhHHcC-----CCCCCCcccccCe
Q 012197 417 EKILCRICFEEQINILLLPCRHHILCRTCGEKC-----KKCPICRVFIEER 462 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~PCgH~~~C~~Ca~~l-----~~CPiCR~~I~~~ 462 (468)
+...|.||++...+.+.+||||. +|..|..+. ..||+||+++...
T Consensus 77 ~~~~C~IC~~~~~~pv~~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 77 QSFMCVCCQELVYQPVTTECFHN-VCKDCLQRSFKAQVFSCPACRHDLGQN 126 (150)
T ss_dssp HHTBCTTTSSBCSSEEECTTSCE-EEHHHHHHHHHTTCCBCTTTCCBCCTT
T ss_pred cCCEeecCChhhcCCEEcCCCCc-hhHHHHHHHHHhCCCcCCCCCccCCCC
Confidence 44689999999999999999998 999998764 3799999998764
No 46
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.07 E-value=7.9e-07 Score=69.79 Aligned_cols=44 Identities=34% Similarity=0.800 Sum_probs=35.8
Q ss_pred ccccccccccccc---ceEEecCCCcccChhhHHcC----CCCCCCcccccC
Q 012197 417 EKILCRICFEEQI---NILLLPCRHHILCRTCGEKC----KKCPICRVFIEE 461 (468)
Q Consensus 417 ~~~~C~IC~~~~~---~vv~~PCgH~~~C~~Ca~~l----~~CPiCR~~I~~ 461 (468)
+...|.||++... .++.+||||. +|.+|..+. ..||+||+++..
T Consensus 22 ~~~~C~IC~~~~~~~~~~~~l~C~H~-fh~~Ci~~w~~~~~~CP~Cr~~~~~ 72 (75)
T 1x4j_A 22 EQTLCVVCMCDFESRQLLRVLPCNHE-FHAKCVDKWLKANRTCPICRADSGP 72 (75)
T ss_dssp SCCEETTTTEECCBTCEEEEETTTEE-EETTHHHHHHHHCSSCTTTCCCCCC
T ss_pred CCCCCeECCcccCCCCeEEEECCCCH-hHHHHHHHHHHcCCcCcCcCCcCCC
Confidence 4568999997643 3577899998 999998863 689999998865
No 47
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.07 E-value=1.3e-06 Score=68.30 Aligned_cols=48 Identities=29% Similarity=0.697 Sum_probs=38.0
Q ss_pred cccccccccccc---cceEEecCCCcccChhhHHcC----CCCCCCcccccCeeee
Q 012197 417 EKILCRICFEEQ---INILLLPCRHHILCRTCGEKC----KKCPICRVFIEERLPI 465 (468)
Q Consensus 417 ~~~~C~IC~~~~---~~vv~~PCgH~~~C~~Ca~~l----~~CPiCR~~I~~~iki 465 (468)
+...|.||++.. ..+..+||||. +|..|..+. ..||+||+++....++
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~C~H~-f~~~Ci~~~~~~~~~CP~Cr~~~~~~~~~ 68 (74)
T 2ep4_A 14 LHELCAVCLEDFKPRDELGICPCKHA-FHRKCLIKWLEVRKVCPLCNMPVLQLAQL 68 (74)
T ss_dssp CSCBCSSSCCBCCSSSCEEEETTTEE-EEHHHHHHHHHHCSBCTTTCCBCSSCCSC
T ss_pred CCCCCcCCCcccCCCCcEEEcCCCCE-ecHHHHHHHHHcCCcCCCcCccccccccc
Confidence 345899999974 34566699999 999998763 6799999999876543
No 48
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=98.06 E-value=1.5e-06 Score=72.36 Aligned_cols=44 Identities=30% Similarity=0.654 Sum_probs=38.1
Q ss_pred cccccccccccccceEE-ecCCCcccChhhHHcC-----CCCCCCcccccC
Q 012197 417 EKILCRICFEEQINILL-LPCRHHILCRTCGEKC-----KKCPICRVFIEE 461 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~-~PCgH~~~C~~Ca~~l-----~~CPiCR~~I~~ 461 (468)
+...|.||++...+.+. +||||. +|..|..+. ..||+||+++..
T Consensus 21 ~~~~C~IC~~~~~~p~~~~~CgH~-FC~~Ci~~~~~~~~~~CP~Cr~~~~~ 70 (100)
T 3lrq_A 21 EVFRCFICMEKLRDARLCPHCSKL-CCFSCIRRWLTEQRAQCPHCRAPLQL 70 (100)
T ss_dssp HHTBCTTTCSBCSSEEECTTTCCE-EEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred CCCCCccCCccccCccccCCCCCh-hhHHHHHHHHHHCcCCCCCCCCcCCH
Confidence 34589999999999999 999999 999998863 479999998754
No 49
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=98.05 E-value=1.6e-06 Score=67.94 Aligned_cols=44 Identities=25% Similarity=0.741 Sum_probs=37.6
Q ss_pred cccccccccccccceEEec-CCCcccChhhHHcC------CCCCCCcccccC
Q 012197 417 EKILCRICFEEQINILLLP-CRHHILCRTCGEKC------KKCPICRVFIEE 461 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~P-CgH~~~C~~Ca~~l------~~CPiCR~~I~~ 461 (468)
+...|.||++...+.+.+| |||. +|..|..+. ..||+||+++..
T Consensus 14 ~~~~C~IC~~~~~~p~~~~~CgH~-fC~~Ci~~~~~~~~~~~CP~Cr~~~~~ 64 (74)
T 2yur_A 14 DELLCLICKDIMTDAVVIPCCGNS-YCDECIRTALLESDEHTCPTCHQNDVS 64 (74)
T ss_dssp GGGSCSSSCCCCTTCEECSSSCCE-ECTTHHHHHHHHSSSSCCSSSCCSSCC
T ss_pred CCCCCcCCChHHhCCeEcCCCCCH-HHHHHHHHHHHhcCCCcCCCCCCcCCC
Confidence 4458999999999999999 9998 999998763 479999997543
No 50
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=98.03 E-value=1.7e-06 Score=71.51 Aligned_cols=44 Identities=34% Similarity=0.831 Sum_probs=37.8
Q ss_pred cccccccccccccceEEe-cCCCcccChhhHHcC----CCCCCCcccccC
Q 012197 417 EKILCRICFEEQINILLL-PCRHHILCRTCGEKC----KKCPICRVFIEE 461 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~-PCgH~~~C~~Ca~~l----~~CPiCR~~I~~ 461 (468)
+...|.||++...+.+.+ ||||. +|..|..+. ..||+||+++..
T Consensus 21 ~~~~C~IC~~~~~~p~~~~~CgH~-fC~~Ci~~~~~~~~~CP~Cr~~~~~ 69 (99)
T 2y43_A 21 DLLRCGICFEYFNIAMIIPQCSHN-YCSLCIRKFLSYKTQCPTCCVTVTE 69 (99)
T ss_dssp HHTBCTTTCSBCSSEEECTTTCCE-EEHHHHHHHHTTCCBCTTTCCBCCG
T ss_pred CCCCcccCChhhCCcCEECCCCCH-hhHHHHHHHHHCCCCCCCCCCcCCh
Confidence 345899999999998887 99998 999998763 579999998875
No 51
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.03 E-value=1.2e-06 Score=69.23 Aligned_cols=45 Identities=27% Similarity=0.696 Sum_probs=35.9
Q ss_pred cccccccccccc---cceEEecCCCcccChhhHHcC----CCCCCCcccccCe
Q 012197 417 EKILCRICFEEQ---INILLLPCRHHILCRTCGEKC----KKCPICRVFIEER 462 (468)
Q Consensus 417 ~~~~C~IC~~~~---~~vv~~PCgH~~~C~~Ca~~l----~~CPiCR~~I~~~ 462 (468)
+...|.||++.- ..+..+||||. +|..|..+. ..||+||+++...
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~C~H~-fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 65 (78)
T 2ect_A 14 SGLECPVCKEDYALGESVRQLPCNHL-FHDSCIVPWLEQHDSCPVCRKSLTGQ 65 (78)
T ss_dssp SSCCCTTTTSCCCTTSCEEECTTSCE-EETTTTHHHHTTTCSCTTTCCCCCCS
T ss_pred CCCCCeeCCccccCCCCEEEeCCCCe-ecHHHHHHHHHcCCcCcCcCCccCCc
Confidence 456899997753 45577899998 999998753 6799999998764
No 52
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.03 E-value=1.5e-06 Score=73.20 Aligned_cols=44 Identities=30% Similarity=0.698 Sum_probs=37.6
Q ss_pred cccccccccccccceEEecCCCcccChhhHHcC-------CCCCCCcccccC
Q 012197 417 EKILCRICFEEQINILLLPCRHHILCRTCGEKC-------KKCPICRVFIEE 461 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~PCgH~~~C~~Ca~~l-------~~CPiCR~~I~~ 461 (468)
+...|.||++...+.+.+||||. +|..|..+. ..||+||+++..
T Consensus 20 ~~~~C~IC~~~~~~p~~~~CgH~-fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 70 (112)
T 1jm7_A 20 KILECPICLELIKEPVSTKCDHI-FCKFCMLKLLNQKKGPSQCPLCKNDITK 70 (112)
T ss_dssp HHTSCSSSCCCCSSCCBCTTSCC-CCSHHHHHHHHSSSSSCCCTTTSCCCCT
T ss_pred CCCCCcccChhhcCeEECCCCCH-HHHHHHHHHHHhCCCCCCCcCCCCcCCH
Confidence 34589999999999888999998 999998763 279999998875
No 53
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=98.02 E-value=1.5e-06 Score=71.02 Aligned_cols=44 Identities=30% Similarity=0.800 Sum_probs=36.4
Q ss_pred cccccccccccccc---eEEecCCCcccChhhHHcC----CCCCCCcccccC
Q 012197 417 EKILCRICFEEQIN---ILLLPCRHHILCRTCGEKC----KKCPICRVFIEE 461 (468)
Q Consensus 417 ~~~~C~IC~~~~~~---vv~~PCgH~~~C~~Ca~~l----~~CPiCR~~I~~ 461 (468)
+...|.||++...+ ++.+||||. +|..|..+- ..||+||+++..
T Consensus 39 ~~~~C~IC~~~~~~~~~~~~l~C~H~-Fh~~Ci~~wl~~~~~CP~Cr~~~~~ 89 (91)
T 2l0b_A 39 QEMCCPICCSEYVKGDVATELPCHHY-FHKPCVSIWLQKSGTCPVCRCMFPP 89 (91)
T ss_dssp SCSEETTTTEECCTTCEEEEETTTEE-EEHHHHHHHHTTTCBCTTTCCBSSC
T ss_pred CCCCCcccChhhcCCCcEEecCCCCh-HHHHHHHHHHHcCCcCcCcCccCCC
Confidence 45689999987555 788899998 999998862 679999998865
No 54
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=98.00 E-value=1.7e-06 Score=73.55 Aligned_cols=43 Identities=35% Similarity=0.868 Sum_probs=37.8
Q ss_pred ccccccccccccceEEecCCCcccChhhHHcC-----CCCCCCcccccC
Q 012197 418 KILCRICFEEQINILLLPCRHHILCRTCGEKC-----KKCPICRVFIEE 461 (468)
Q Consensus 418 ~~~C~IC~~~~~~vv~~PCgH~~~C~~Ca~~l-----~~CPiCR~~I~~ 461 (468)
...|.||++...+.+.+||||. +|..|..+. ..||.||+++..
T Consensus 15 ~~~C~iC~~~~~~p~~~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 15 ECQCGICMEILVEPVTLPCNHT-LCKPCFQSTVEKASLCCPFCRRRVSS 62 (115)
T ss_dssp HHBCTTTCSBCSSCEECTTSCE-ECHHHHCCCCCTTTSBCTTTCCBCHH
T ss_pred CCCCccCCcccCceeEcCCCCH-HhHHHHHHHHhHCcCCCCCCCcccCc
Confidence 4589999999999999999999 999999874 369999998864
No 55
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=97.97 E-value=2.5e-06 Score=69.44 Aligned_cols=42 Identities=26% Similarity=0.789 Sum_probs=37.1
Q ss_pred cccccccccccccceEEec-CCCcccChhhHHcC------CCCCCCcccc
Q 012197 417 EKILCRICFEEQINILLLP-CRHHILCRTCGEKC------KKCPICRVFI 459 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~P-CgH~~~C~~Ca~~l------~~CPiCR~~I 459 (468)
+...|.||++.-.+.+.+| |||. +|..|..+. ..||+||+++
T Consensus 12 ~~~~C~IC~~~~~~p~~~~~CgH~-fC~~Ci~~~~~~~~~~~CP~Cr~~~ 60 (92)
T 3ztg_A 12 DELLCLICKDIMTDAVVIPCCGNS-YCDECIRTALLESDEHTCPTCHQND 60 (92)
T ss_dssp TTTEETTTTEECSSCEECTTTCCE-ECHHHHHHHHHHCTTCCCTTTCCSS
T ss_pred cCCCCCCCChhhcCceECCCCCCH-HHHHHHHHHHHhcCCCcCcCCCCcC
Confidence 4568999999999999999 9999 999998753 4899999986
No 56
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=97.95 E-value=3.3e-06 Score=71.03 Aligned_cols=45 Identities=31% Similarity=0.778 Sum_probs=38.9
Q ss_pred cccccccccccccceEEe-cCCCcccChhhHHcC----CCCCCCcccccCe
Q 012197 417 EKILCRICFEEQINILLL-PCRHHILCRTCGEKC----KKCPICRVFIEER 462 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~-PCgH~~~C~~Ca~~l----~~CPiCR~~I~~~ 462 (468)
+...|.||++...+.+.+ ||||. +|..|..+. ..||+||+++...
T Consensus 14 ~~~~C~IC~~~~~~p~~~~~CgH~-fC~~Ci~~~~~~~~~CP~Cr~~~~~~ 63 (108)
T 2ckl_A 14 PHLMCVLCGGYFIDATTIIECLHS-FCKTCIVRYLETSKYCPICDVQVHKT 63 (108)
T ss_dssp GGTBCTTTSSBCSSEEEETTTCCE-EEHHHHHHHHTSCSBCTTTCCBSCSS
T ss_pred CcCCCccCChHHhCcCEeCCCCCh-hhHHHHHHHHHhCCcCcCCCcccccc
Confidence 445899999999999887 99998 999998764 6799999998753
No 57
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=97.94 E-value=2.8e-06 Score=66.93 Aligned_cols=44 Identities=20% Similarity=0.315 Sum_probs=38.3
Q ss_pred cccccccccccccceEEecCCCcccChhhHHcC-----CCCCCCcccccC
Q 012197 417 EKILCRICFEEQINILLLPCRHHILCRTCGEKC-----KKCPICRVFIEE 461 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~PCgH~~~C~~Ca~~l-----~~CPiCR~~I~~ 461 (468)
+...|.||++.-.+.+.+||||. +|..|..+. .+||+||+++..
T Consensus 7 ~~~~C~IC~~~~~~Pv~~~CgH~-fc~~Ci~~~~~~~~~~CP~C~~~~~~ 55 (78)
T 1t1h_A 7 EYFRCPISLELMKDPVIVSTGQT-YERSSIQKWLDAGHKTCPKSQETLLH 55 (78)
T ss_dssp SSSSCTTTSCCCSSEEEETTTEE-EEHHHHHHHHTTTCCBCTTTCCBCSS
T ss_pred ccCCCCCccccccCCEEcCCCCe-ecHHHHHHHHHHCcCCCCCCcCCCCh
Confidence 45689999999999999999999 999998752 569999999864
No 58
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=97.87 E-value=5.2e-06 Score=70.92 Aligned_cols=44 Identities=25% Similarity=0.624 Sum_probs=38.7
Q ss_pred cccccccccccccceEEe-cCCCcccChhhHHcC--CCCCCCcccccC
Q 012197 417 EKILCRICFEEQINILLL-PCRHHILCRTCGEKC--KKCPICRVFIEE 461 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~-PCgH~~~C~~Ca~~l--~~CPiCR~~I~~ 461 (468)
+...|.||++...+.+.+ ||||. +|..|..+. ..||+||+++..
T Consensus 21 ~~~~C~IC~~~~~~pv~~~~CgH~-fC~~Ci~~~~~~~CP~Cr~~~~~ 67 (117)
T 1jm7_B 21 KLLRCSRCTNILREPVCLGGCEHI-FCSNCVSDCIGTGCPVCYTPAWI 67 (117)
T ss_dssp HTTSCSSSCSCCSSCBCCCSSSCC-BCTTTGGGGTTTBCSSSCCBCSC
T ss_pred hCCCCCCCChHhhCccEeCCCCCH-HHHHHHHHHhcCCCcCCCCcCcc
Confidence 456899999999999998 99999 999999886 579999998853
No 59
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.83 E-value=6.8e-06 Score=62.03 Aligned_cols=38 Identities=32% Similarity=0.927 Sum_probs=33.1
Q ss_pred cccccccccccccceEEecCCCcccChhhHHcC-------CCCCCC
Q 012197 417 EKILCRICFEEQINILLLPCRHHILCRTCGEKC-------KKCPIC 455 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~PCgH~~~C~~Ca~~l-------~~CPiC 455 (468)
+...|.||++...+.+.+||||. +|.+|..+. .+||+|
T Consensus 19 ~~~~C~IC~~~~~~p~~~~CgH~-fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 19 EEVICPICLDILQKPVTIDCGHN-FCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCBCTTTCSBCSSCEECTTSSE-ECHHHHHHHHHHCSSCCCCSCC
T ss_pred cCCCCCcCCchhCCeEEeCCCCc-chHHHHHHHHHcCCCCCcCcCC
Confidence 45689999999999999999999 999998763 379998
No 60
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.82 E-value=5.3e-06 Score=61.28 Aligned_cols=38 Identities=26% Similarity=0.873 Sum_probs=33.1
Q ss_pred cccccccccccccceEEecCCCcccChhhHHcC-------CCCCCC
Q 012197 417 EKILCRICFEEQINILLLPCRHHILCRTCGEKC-------KKCPIC 455 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~PCgH~~~C~~Ca~~l-------~~CPiC 455 (468)
+...|.||++...+.+.+||||. +|.+|..+. .+||+|
T Consensus 14 ~~~~C~IC~~~~~~p~~~~CgH~-fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 14 VEASCSVCLEYLKEPVIIECGHN-FCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCCBCSSSCCBCSSCCCCSSCCC-CCHHHHHHHTTSSCCSCCCSCC
T ss_pred cCCCCccCCcccCccEeCCCCCc-cCHHHHHHHHHhcCCCCCCCCC
Confidence 45689999999999999999999 999998763 569998
No 61
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=97.82 E-value=6.4e-06 Score=70.43 Aligned_cols=44 Identities=32% Similarity=0.726 Sum_probs=38.7
Q ss_pred cccccccccccccceEEecCCCcccChhhHHcC-----CCCCCCcccccC
Q 012197 417 EKILCRICFEEQINILLLPCRHHILCRTCGEKC-----KKCPICRVFIEE 461 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~PCgH~~~C~~Ca~~l-----~~CPiCR~~I~~ 461 (468)
+...|.||++...+.+.+||||. +|..|..+. .+||+||+++..
T Consensus 17 ~~~~C~IC~~~~~~p~~~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 65 (118)
T 3hct_A 17 SKYECPICLMALREAVQTPCGHR-FCKACIIKSIRDAGHKCPVDNEILLE 65 (118)
T ss_dssp GGGBCTTTCSBCSSEEECTTSCE-EEHHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred CCCCCCcCChhhcCeEECCcCCh-hhHHHHHHHHhhCCCCCCCCCCCcCH
Confidence 44589999999999999999998 999998763 389999998876
No 62
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=97.81 E-value=5.7e-06 Score=74.87 Aligned_cols=44 Identities=30% Similarity=0.787 Sum_probs=37.5
Q ss_pred cccccccccccccceEEe-cCCCcccChhhHHcC-----CCCCCCcccccC
Q 012197 417 EKILCRICFEEQINILLL-PCRHHILCRTCGEKC-----KKCPICRVFIEE 461 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~-PCgH~~~C~~Ca~~l-----~~CPiCR~~I~~ 461 (468)
+...|.||++...+.+.+ ||||. +|..|..+. ..||+||.++..
T Consensus 53 ~~~~C~IC~~~~~~p~~~~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 102 (165)
T 2ckl_B 53 SELMCPICLDMLKNTMTTKECLHR-FCADCIITALRSGNKECPTCRKKLVS 102 (165)
T ss_dssp HHHBCTTTSSBCSSEEEETTTCCE-EEHHHHHHHHHTTCCBCTTTCCBCCS
T ss_pred CCCCCcccChHhhCcCEeCCCCCh-hHHHHHHHHHHhCcCCCCCCCCcCCC
Confidence 345899999999998887 99998 999998763 469999999854
No 63
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=97.75 E-value=7.9e-06 Score=69.47 Aligned_cols=43 Identities=30% Similarity=0.632 Sum_probs=37.7
Q ss_pred ccccccccccccceEEecCCCcccChhhHHc-----CCCCCCCcccccC
Q 012197 418 KILCRICFEEQINILLLPCRHHILCRTCGEK-----CKKCPICRVFIEE 461 (468)
Q Consensus 418 ~~~C~IC~~~~~~vv~~PCgH~~~C~~Ca~~-----l~~CPiCR~~I~~ 461 (468)
...|.||++...+.+.+||||. +|..|..+ -..||+||+++..
T Consensus 23 ~~~C~IC~~~~~~p~~~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 70 (116)
T 1rmd_A 23 SISCQICEHILADPVETSCKHL-FCRICILRCLKVMGSYCPSCRYPCFP 70 (116)
T ss_dssp HTBCTTTCSBCSSEEECTTSCE-EEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred CCCCCCCCcHhcCcEEcCCCCc-ccHHHHHHHHhHCcCcCCCCCCCCCH
Confidence 4589999999999999999999 99999875 2579999998875
No 64
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=97.70 E-value=9e-06 Score=69.97 Aligned_cols=44 Identities=30% Similarity=0.765 Sum_probs=37.3
Q ss_pred cccccccccccccce-------EEecCCCcccChhhHHcC----CCCCCCcccccC
Q 012197 417 EKILCRICFEEQINI-------LLLPCRHHILCRTCGEKC----KKCPICRVFIEE 461 (468)
Q Consensus 417 ~~~~C~IC~~~~~~v-------v~~PCgH~~~C~~Ca~~l----~~CPiCR~~I~~ 461 (468)
+...|.||++.-.+. +.+||||. +|.+|..+- .+||+||+++..
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~-fc~~Ci~~~~~~~~~CP~Cr~~~~~ 60 (133)
T 4ap4_A 6 GTVSCPICMDGYSEIVQNGRLIVSTECGHV-FCSQCLRDSLKNANTCPTCRKKINH 60 (133)
T ss_dssp CSCBCTTTCCBHHHHHHTTCCEEEETTCCE-EEHHHHHHHHTTCSBCTTTCCBCTT
T ss_pred CCCCCcccChhhhCccccccCeEecCCCCh-hhHHHHHHHHHhCCCCCCCCCcCcc
Confidence 456899999987665 88999998 999999763 679999998875
No 65
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=97.57 E-value=1.6e-05 Score=67.24 Aligned_cols=43 Identities=28% Similarity=0.539 Sum_probs=33.5
Q ss_pred ccccccccccc------------------ceEEecCCCcccChhhHHc---------CCCCCCCcccccCe
Q 012197 419 ILCRICFEEQI------------------NILLLPCRHHILCRTCGEK---------CKKCPICRVFIEER 462 (468)
Q Consensus 419 ~~C~IC~~~~~------------------~vv~~PCgH~~~C~~Ca~~---------l~~CPiCR~~I~~~ 462 (468)
..|.||++.-. .+.++||||. +|.+|..+ -..||+||+.+...
T Consensus 26 ~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~-Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~~ 95 (114)
T 1v87_A 26 EDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHA-FHLLCLLAMYCNGNKDGSLQCPSCKTIYGEK 95 (114)
T ss_dssp CEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCE-ECHHHHHHHHHHTCCSSCCBCTTTCCBSSSC
T ss_pred CcCccCChhhcCcccccccccccccCcccceecCCCCCc-ccHHHHHHHHHcccCCCCCcCCCCCCccCCC
Confidence 48999998853 2347899998 99999764 24799999987643
No 66
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.57 E-value=3.1e-05 Score=61.80 Aligned_cols=43 Identities=21% Similarity=0.566 Sum_probs=31.2
Q ss_pred ccccccccccccc--------------eEEe-cCCCcccChhhHHc----CCCCCCCcccccC
Q 012197 418 KILCRICFEEQIN--------------ILLL-PCRHHILCRTCGEK----CKKCPICRVFIEE 461 (468)
Q Consensus 418 ~~~C~IC~~~~~~--------------vv~~-PCgH~~~C~~Ca~~----l~~CPiCR~~I~~ 461 (468)
+..|.||++.-.+ ++.+ +|||. ++.+|..+ -+.||+||+++..
T Consensus 15 ~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~-FH~~Ci~~Wl~~~~~CP~CR~~~~~ 76 (81)
T 2ecl_A 15 CDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHS-FHNCCMSLWVKQNNRCPLCQQDWVV 76 (81)
T ss_dssp CSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCE-EEHHHHHHHTTTCCBCTTTCCBCCE
T ss_pred CCCCcccChhhhccCcccccccCCCceEEEeCCCCCc-cChHHHHHHHHhCCCCCCcCCCcch
Confidence 3457777775433 4444 59999 99999886 2679999998753
No 67
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=97.54 E-value=2.3e-05 Score=67.35 Aligned_cols=49 Identities=33% Similarity=0.796 Sum_probs=39.7
Q ss_pred cccccccccccccce-------EEecCCCcccChhhHHc----CCCCCCCcccccC--eeeee
Q 012197 417 EKILCRICFEEQINI-------LLLPCRHHILCRTCGEK----CKKCPICRVFIEE--RLPIY 466 (468)
Q Consensus 417 ~~~~C~IC~~~~~~v-------v~~PCgH~~~C~~Ca~~----l~~CPiCR~~I~~--~ikiy 466 (468)
+...|.||++.-.+. +..||||. +|..|..+ .+.||+||++++. ..++|
T Consensus 71 ~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~-fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~~~~~ 132 (133)
T 4ap4_A 71 GTVSCPICMDGYSEIVQNGRLIVSTECGHV-FCSQCLRDSLKNANTCPTCRKKINHKRYHPIY 132 (133)
T ss_dssp SSCBCTTTCCBHHHHHHTTCCEEEETTSBE-EEHHHHHHHHHHCSBCTTTCCBCCGGGEEEEC
T ss_pred CCCCCCCCCCccccccccCcceEeCCCCCh-hhHHHHHHHHHcCCCCCCCCCcCChhcceeee
Confidence 456899999976654 88899999 99999876 4789999999875 45555
No 68
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=97.47 E-value=1.7e-05 Score=70.21 Aligned_cols=42 Identities=24% Similarity=0.490 Sum_probs=37.1
Q ss_pred cccccccccccccceEEecCCCcccChhhHHcC-----CCCCCCcccc
Q 012197 417 EKILCRICFEEQINILLLPCRHHILCRTCGEKC-----KKCPICRVFI 459 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~PCgH~~~C~~Ca~~l-----~~CPiCR~~I 459 (468)
+...|.||++...+.+.+||||. +|..|..+. .+||+||+++
T Consensus 30 ~~~~C~IC~~~~~~pv~~~CgH~-FC~~Ci~~~~~~~~~~CP~Cr~~~ 76 (141)
T 3knv_A 30 AKYLCSACRNVLRRPFQAQCGHR-YCSFCLASILSSGPQNCAACVHEG 76 (141)
T ss_dssp GGGBCTTTCSBCSSEEECTTSCE-EEHHHHHHHGGGSCEECHHHHHTT
T ss_pred cCcCCCCCChhhcCcEECCCCCc-cCHHHHHHHHhcCCCCCCCCCCcc
Confidence 45689999999999999999999 999998874 3799999975
No 69
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=97.34 E-value=7e-05 Score=67.89 Aligned_cols=44 Identities=32% Similarity=0.726 Sum_probs=38.9
Q ss_pred cccccccccccccceEEecCCCcccChhhHHcC-----CCCCCCcccccC
Q 012197 417 EKILCRICFEEQINILLLPCRHHILCRTCGEKC-----KKCPICRVFIEE 461 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~PCgH~~~C~~Ca~~l-----~~CPiCR~~I~~ 461 (468)
+...|.||++...+.+..||||. +|..|..+. .+||+||+++..
T Consensus 17 ~~~~C~IC~~~~~~pv~~~CgH~-fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 65 (170)
T 3hcs_A 17 SKYECPICLMALREAVQTPCGHR-FCKACIIKSIRDAGHKCPVDNEILLE 65 (170)
T ss_dssp GGGBCTTTCSBCSSEEECTTSCE-EEHHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred CCCCCCCCChhhcCcEECCCCCH-HHHHHHHHHHHhCCCCCCCCccCcch
Confidence 45689999999999999999999 999999774 489999998876
No 70
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=97.28 E-value=9.9e-05 Score=59.52 Aligned_cols=44 Identities=14% Similarity=0.094 Sum_probs=38.7
Q ss_pred cccccccccccccceEEecCCCcccChhhHHcC----CCCCCCcccccC
Q 012197 417 EKILCRICFEEQINILLLPCRHHILCRTCGEKC----KKCPICRVFIEE 461 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~PCgH~~~C~~Ca~~l----~~CPiCR~~I~~ 461 (468)
+...|.||.+--.+.|..||||. +|..|..+. ..||+||++...
T Consensus 13 ~~~~CpI~~~~m~dPV~~~cGht-f~r~~I~~~l~~~~~cP~~~~~l~~ 60 (85)
T 2kr4_A 13 DEFRDPLMDTLMTDPVRLPSGTV-MDRSIILRHLLNSPTDPFNRQMLTE 60 (85)
T ss_dssp TTTBCTTTCSBCSSEEECTTSCE-EEHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred hheECcccCchhcCCeECCCCCE-ECHHHHHHHHhcCCCCCCCcCCCCh
Confidence 45699999999999999999998 999997763 689999998764
No 71
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=97.27 E-value=9.9e-05 Score=61.49 Aligned_cols=44 Identities=14% Similarity=0.064 Sum_probs=38.8
Q ss_pred cccccccccccccceEEecCCCcccChhhHHcC----CCCCCCcccccC
Q 012197 417 EKILCRICFEEQINILLLPCRHHILCRTCGEKC----KKCPICRVFIEE 461 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~PCgH~~~C~~Ca~~l----~~CPiCR~~I~~ 461 (468)
+...|+||.+--.+.|.+||||. +|..|..+. ..||+||++++.
T Consensus 28 ~~~~CpI~~~~m~dPV~~~cGht-f~r~~I~~~l~~~~~cP~~~~~l~~ 75 (100)
T 2kre_A 28 DEFRDPLMDTLMTDPVRLPSGTI-MDRSIILRHLLNSPTDPFNRQTLTE 75 (100)
T ss_dssp TTTBCTTTCSBCSSEEEETTTEE-EEHHHHHHHTTSCSBCSSSCCBCCT
T ss_pred HhhCCcCccCcccCCeECCCCCE-EchHHHHHHHHcCCCCCCCCCCCCh
Confidence 45699999999999999999999 999998763 579999998764
No 72
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=97.22 E-value=0.00013 Score=60.57 Aligned_cols=44 Identities=16% Similarity=0.150 Sum_probs=38.6
Q ss_pred cccccccccccccceEEecCC-CcccChhhHHcC----CCCCCCcccccC
Q 012197 417 EKILCRICFEEQINILLLPCR-HHILCRTCGEKC----KKCPICRVFIEE 461 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~PCg-H~~~C~~Ca~~l----~~CPiCR~~I~~ 461 (468)
+...|+||++--.+.|.+||| |. +|..|..+. ..||+||++++.
T Consensus 21 ~~~~CpI~~~~m~dPV~~~cG~ht-f~r~cI~~~l~~~~~cP~~~~~l~~ 69 (98)
T 1wgm_A 21 DEFLDPIMSTLMCDPVVLPSSRVT-VDRSTIARHLLSDQTDPFNRSPLTM 69 (98)
T ss_dssp TTTBCTTTCSBCSSEEECTTTCCE-EEHHHHHHHTTTSCBCTTTCSBCCT
T ss_pred HhcCCcCccccccCCeECCCCCeE-ECHHHHHHHHHhCCCCCCCCCCCCh
Confidence 456899999999999999999 98 999998763 579999998764
No 73
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=97.12 E-value=0.00015 Score=70.14 Aligned_cols=44 Identities=18% Similarity=0.161 Sum_probs=38.2
Q ss_pred cccccccccccccceEEecCCCcccChhhHHcC-----CCCCCCcccccC
Q 012197 417 EKILCRICFEEQINILLLPCRHHILCRTCGEKC-----KKCPICRVFIEE 461 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~PCgH~~~C~~Ca~~l-----~~CPiCR~~I~~ 461 (468)
+...|+||++--.+.|.+||||. +|..|.... ..||+||++++.
T Consensus 207 ~~~~c~i~~~~~~dPv~~~~gh~-f~~~~i~~~~~~~~~~cP~~~~~~~~ 255 (281)
T 2c2l_A 207 DYLCGKISFELMREPCITPSGIT-YDRKDIEEHLQRVGHFNPVTRSPLTQ 255 (281)
T ss_dssp STTBCTTTCSBCSSEEECSSCCE-EETTHHHHHHHHTCSSCTTTCCCCCG
T ss_pred cccCCcCcCCHhcCCeECCCCCE-ECHHHHHHHHHHCCCCCcCCCCCCch
Confidence 45689999999999999999999 999998752 349999998864
No 74
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=97.00 E-value=0.00032 Score=59.03 Aligned_cols=42 Identities=21% Similarity=0.388 Sum_probs=32.9
Q ss_pred cccccccccccc------------------ceEEecCCCcccChhhHHc----CCCCCCCccccc
Q 012197 418 KILCRICFEEQI------------------NILLLPCRHHILCRTCGEK----CKKCPICRVFIE 460 (468)
Q Consensus 418 ~~~C~IC~~~~~------------------~vv~~PCgH~~~C~~Ca~~----l~~CPiCR~~I~ 460 (468)
...|.||++.-. .++.+||||. ++..|..+ -..||+||++..
T Consensus 37 ~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~-FH~~Ci~~Wl~~~~~CP~Cr~~~~ 100 (106)
T 3dpl_R 37 VDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHA-FHFHCISRWLKTRQVCPLDNREWE 100 (106)
T ss_dssp SCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCE-EEHHHHHHHHTTCSBCSSSCSBCC
T ss_pred CCCCccCChhHhCcCchhhccccccCCccceEeecccCcE-ECHHHHHHHHHcCCcCcCCCCcce
Confidence 457999987633 2577899998 99999987 367999999853
No 75
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=96.97 E-value=0.00042 Score=57.28 Aligned_cols=44 Identities=25% Similarity=0.572 Sum_probs=32.5
Q ss_pred ccccccc-ccceEEecCCCcccChhhHHc-----CCCCCCCcccccCeeee
Q 012197 421 CRICFEE-QINILLLPCRHHILCRTCGEK-----CKKCPICRVFIEERLPI 465 (468)
Q Consensus 421 C~IC~~~-~~~vv~~PCgH~~~C~~Ca~~-----l~~CPiCR~~I~~~iki 465 (468)
|.+|--. ..-...+||+|. +|.+|+.. .+.||.||.+|.++.++
T Consensus 4 C~~C~~Pi~iygRmIPCkHv-FCydCa~~~~~~~~k~Cp~C~~~V~rVe~~ 53 (101)
T 3vk6_A 4 CDKCGLPIKVYGRMIPCKHV-FCYDCAILHEKKGDKMCPGCSDPVQRIEQC 53 (101)
T ss_dssp CTTTCSBCSEEEEEETTCCE-EEHHHHHHHHHTTCCBCTTTCCBCSEEEEE
T ss_pred cCccCCCeEEEeeecccccc-HHHHHHHHHHhccCCCCcCcCCeeeeeEEe
Confidence 5555443 223456799996 99999965 46799999999987664
No 76
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=96.58 E-value=0.00084 Score=61.75 Aligned_cols=44 Identities=18% Similarity=0.150 Sum_probs=38.0
Q ss_pred cccccccccccccceEEecCCCcccChhhHHcC-----CCCCCCcccccC
Q 012197 417 EKILCRICFEEQINILLLPCRHHILCRTCGEKC-----KKCPICRVFIEE 461 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~PCgH~~~C~~Ca~~l-----~~CPiCR~~I~~ 461 (468)
+...|+||.+--.+.|..||||. +|..|.... ..||+||.+.+.
T Consensus 105 ~~f~CPI~~elm~DPV~~~~Ght-fer~~I~~~l~~~~~tcP~t~~~l~~ 153 (179)
T 2f42_A 105 DYLCGKISFELMREPCITPSGIT-YDRKDIEEHLQRVGHFDPVTRSPLTQ 153 (179)
T ss_dssp GGGBCTTTCSBCSSEEECTTSCE-EEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred HhhcccCccccCCCCeECCCCCE-ECHHHHHHHHHhCCCCCCCCcCCCCh
Confidence 45799999999999999999998 999997652 359999998765
No 77
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.53 E-value=0.00093 Score=54.67 Aligned_cols=41 Identities=22% Similarity=0.321 Sum_probs=35.0
Q ss_pred cccccccccccccceEEec-CCCcccChhhHHcC----------CCCCC--Cccc
Q 012197 417 EKILCRICFEEQINILLLP-CRHHILCRTCGEKC----------KKCPI--CRVF 458 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~P-CgH~~~C~~Ca~~l----------~~CPi--CR~~ 458 (468)
+...|+||++--.+.|..| |||. +|..|.... ..||+ |++.
T Consensus 6 ~~~~CPI~~~~~~dPV~~~~cGh~-f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~ 59 (94)
T 2yu4_A 6 SGFTCPITKEEMKKPVKNKVCGHT-YEEDAIVRMIESRQKRKKKAYCPQIGCSHT 59 (94)
T ss_dssp SCCBCTTTCSBCSSEEEESSSCCE-EEHHHHHHHHHHHHTTTCCBCCCSTTCCCC
T ss_pred cEeECcCcCchhcCCEEcCCCCCe-ecHHHHHHHHHHccCcCCCCCCCcCcCccc
Confidence 4568999999999999997 9998 999997653 27999 9865
No 78
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=96.50 E-value=0.00042 Score=59.43 Aligned_cols=41 Identities=20% Similarity=0.382 Sum_probs=0.4
Q ss_pred ccccccccccccc------------------eEEecCCCcccChhhHHc----CCCCCCCcccc
Q 012197 418 KILCRICFEEQIN------------------ILLLPCRHHILCRTCGEK----CKKCPICRVFI 459 (468)
Q Consensus 418 ~~~C~IC~~~~~~------------------vv~~PCgH~~~C~~Ca~~----l~~CPiCR~~I 459 (468)
...|.||++.-.+ ++..||+|. ++..|..+ -..||+||++.
T Consensus 48 ~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~-FH~~CI~~Wl~~~~~CP~Cr~~~ 110 (117)
T 4a0k_B 48 VDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHA-FHFHCISRWLKTRQVCPLDNREW 110 (117)
T ss_dssp C---------------------------------------------------------------
T ss_pred CCcCeECChhhcCcChhhhcccccccccccccccCCcCce-EcHHHHHHHHHcCCcCCCCCCee
Confidence 3579999876432 344699999 99999887 26799999985
No 79
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=96.33 E-value=0.00064 Score=55.42 Aligned_cols=41 Identities=22% Similarity=0.551 Sum_probs=30.5
Q ss_pred cccccccccccccce---EEecCCCcccChhhHHcC------------CCCCC--Cccc
Q 012197 417 EKILCRICFEEQINI---LLLPCRHHILCRTCGEKC------------KKCPI--CRVF 458 (468)
Q Consensus 417 ~~~~C~IC~~~~~~v---v~~PCgH~~~C~~Ca~~l------------~~CPi--CR~~ 458 (468)
+...|.||++..... .+.||||. +|.+|..+. .+||. ||..
T Consensus 4 ~~~~C~IC~~~~~~~~~~~l~~CgH~-FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~ 61 (94)
T 1wim_A 4 GSSGCKLCLGEYPVEQMTTIAQCQCI-FCTLCLKQYVELLIKEGLETAISCPDAACPKQ 61 (94)
T ss_dssp SBCCCSSSCCCCBGGGEEEETTTTEE-EEHHHHHHHHHHHHHHCSCCCEECSCTTCSSC
T ss_pred CCcCCcccCcccccccceEcCCCCCc-ccHHHHHHHHHHHhhcCCcccccCccccCCCC
Confidence 345899999875432 23489999 999996541 26999 9987
No 80
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.14 E-value=0.0026 Score=50.63 Aligned_cols=46 Identities=26% Similarity=0.644 Sum_probs=35.0
Q ss_pred cccccccccccc--cceEEecCC-----CcccChhhHHcC------CCCCCCcccccCee
Q 012197 417 EKILCRICFEEQ--INILLLPCR-----HHILCRTCGEKC------KKCPICRVFIEERL 463 (468)
Q Consensus 417 ~~~~C~IC~~~~--~~vv~~PCg-----H~~~C~~Ca~~l------~~CPiCR~~I~~~i 463 (468)
+...|.||++.. .+.++.||+ |. +-.+|..+= ..||+||.++....
T Consensus 14 ~~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~-fH~~Cl~~Wl~~~~~~~CplCr~~~~~~~ 72 (80)
T 2d8s_A 14 SQDICRICHCEGDDESPLITPCHCTGSLHF-VHQACLQQWIKSSDTRCCELCKYEFIMET 72 (80)
T ss_dssp TSCCCSSSCCCCCSSSCEECSSSCCSSSCC-EETTHHHHHHHHHCCSBCSSSCCBCCCCC
T ss_pred CCCCCeEcCccccCCCeeEeccccCCcCCe-eCHHHHHHHHhhCCCCCCCCCCCeeecCc
Confidence 456899999753 345678996 98 889998762 47999999876543
No 81
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=95.32 E-value=0.005 Score=59.68 Aligned_cols=44 Identities=20% Similarity=0.434 Sum_probs=37.1
Q ss_pred cccccccccccccceEEe-cCCCcccChhhHHcC------CCCCC--CcccccC
Q 012197 417 EKILCRICFEEQINILLL-PCRHHILCRTCGEKC------KKCPI--CRVFIEE 461 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~-PCgH~~~C~~Ca~~l------~~CPi--CR~~I~~ 461 (468)
....|+||++.-.+.|.. .|||. +|..|..+. ..||+ ||+.+..
T Consensus 180 ~el~CPIcl~~f~DPVts~~CGHs-FcR~cI~~~~~~~~~~~CPvtGCr~~l~~ 232 (267)
T 3htk_C 180 IELTCPITCKPYEAPLISRKCNHV-FDRDGIQNYLQGYTTRDCPQAACSQVVSM 232 (267)
T ss_dssp CCSBCTTTSSBCSSEEEESSSCCE-EEHHHHHHHSTTCSCEECSGGGCSCEECG
T ss_pred eeeECcCccCcccCCeeeCCCCCc-ccHHHHHHHHHhCCCCCCCcccccCcCch
Confidence 456899999999999975 99998 999998874 25999 9997654
No 82
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=93.46 E-value=0.03 Score=42.03 Aligned_cols=42 Identities=19% Similarity=0.165 Sum_probs=37.1
Q ss_pred cccccccccccceEEe-cCCCcccChhhHHcC----CCCCCCcccccC
Q 012197 419 ILCRICFEEQINILLL-PCRHHILCRTCGEKC----KKCPICRVFIEE 461 (468)
Q Consensus 419 ~~C~IC~~~~~~vv~~-PCgH~~~C~~Ca~~l----~~CPiCR~~I~~ 461 (468)
..|.||.+--.+.|.. +|||. +|.+|..+- .+||++|++.+.
T Consensus 4 ~~CpIs~~~m~dPV~~~~sG~~-yer~~I~~~l~~~~~cP~t~~~L~~ 50 (61)
T 2bay_A 4 MLCAISGKVPRRPVLSPKSRTI-FEKSLLEQYVKDTGNDPITNEPLSI 50 (61)
T ss_dssp CCCTTTCSCCSSEEEETTTTEE-EEHHHHHHHHHHHSBCTTTCCBCCG
T ss_pred EEecCCCCCCCCCEEeCCCCcE-EcHHHHHHHHHhCCCCcCCcCCCCh
Confidence 5799999999999999 99998 999998874 569999998754
No 83
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=90.59 E-value=0.12 Score=38.57 Aligned_cols=44 Identities=30% Similarity=0.520 Sum_probs=30.9
Q ss_pred cccccccccccccceEEecCCCcc----cChhhHHc------CCCCCCCccccc
Q 012197 417 EKILCRICFEEQINILLLPCRHHI----LCRTCGEK------CKKCPICRVFIE 460 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~PCgH~~----~C~~Ca~~------l~~CPiCR~~I~ 460 (468)
+...|.||++...+..+.||.+.. +=.+|..+ -..||+||.++.
T Consensus 5 ~~~~CrIC~~~~~~~l~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~~ 58 (60)
T 1vyx_A 5 DVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYN 58 (60)
T ss_dssp SCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCEeEEeecCCCCceecCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCCeee
Confidence 456899999886666678986421 33556554 257999999765
No 84
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=87.11 E-value=0.21 Score=40.66 Aligned_cols=46 Identities=28% Similarity=0.792 Sum_probs=37.7
Q ss_pred ccccccccccccceEEecCCCcccChhhHHcC----CCCCCCcccccCeeee
Q 012197 418 KILCRICFEEQINILLLPCRHHILCRTCGEKC----KKCPICRVFIEERLPI 465 (468)
Q Consensus 418 ~~~C~IC~~~~~~vv~~PCgH~~~C~~Ca~~l----~~CPiCR~~I~~~iki 465 (468)
...|+.|.-..++.| .|.-..+|..|...+ +.||+|..+....+++
T Consensus 28 ~~nCKsCWf~~k~LV--~C~dHYLCl~CLtlmL~~SdrCpIC~~pLPtkl~~ 77 (99)
T 2ko5_A 28 PQFCKSCWFENKGLV--ECNNHYLCLNCLTLLLSVSNRCPICKMPLPTKLRP 77 (99)
T ss_dssp CCCCCSSCSCCSSEE--ECSSCEEEHHHHHHTCSSSSEETTTTEECCCCSCT
T ss_pred cccChhhccccCCee--eecchhhHHHHHHHHHhhccCCcccCCcCCcceec
Confidence 357999999998766 687444999999987 6799999998887664
No 85
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=83.68 E-value=0.21 Score=50.20 Aligned_cols=45 Identities=24% Similarity=0.660 Sum_probs=32.3
Q ss_pred cccccccccccccc------eE--EecCCCcccChhhHHc----C-----------CCCCCCcccccCe
Q 012197 417 EKILCRICFEEQIN------IL--LLPCRHHILCRTCGEK----C-----------KKCPICRVFIEER 462 (468)
Q Consensus 417 ~~~~C~IC~~~~~~------vv--~~PCgH~~~C~~Ca~~----l-----------~~CPiCR~~I~~~ 462 (468)
....|.|||+...+ .+ ..+|||. +=..|..+ . ..||.||++|+..
T Consensus 307 ~~~ECaICys~~l~~g~lPdk~C~n~~C~h~-FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs~s 374 (381)
T 3k1l_B 307 EELRCNICFAYRLDGGEVPLVSCDNAKCVLK-CHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLSTS 374 (381)
T ss_dssp SCCSCSSSCCSSCTTCCCCCBCCSCTTCCCC-BCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEEGG
T ss_pred CCccCcccceeecCCCCCccccccCCccCCc-cchHHHHHHHHhCCCccccccccCCCCCCCCCcCCcc
Confidence 45689999986444 11 2379998 78889754 1 4699999998754
No 86
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=78.36 E-value=1.7 Score=33.74 Aligned_cols=45 Identities=22% Similarity=0.495 Sum_probs=31.8
Q ss_pred cccccccccccccc-eEEecCCCcccChhhHHc------CCCCCCCcccccCe
Q 012197 417 EKILCRICFEEQIN-ILLLPCRHHILCRTCGEK------CKKCPICRVFIEER 462 (468)
Q Consensus 417 ~~~~C~IC~~~~~~-vv~~PCgH~~~C~~Ca~~------l~~CPiCR~~I~~~ 462 (468)
....|.||++.-.. ..-..|+|. +=..|..+ -.+||+||++.+..
T Consensus 14 ~i~~C~IC~~~i~~g~~C~~C~h~-fH~~Ci~kWl~~~~~~~CP~Cr~~w~~~ 65 (74)
T 2ct0_A 14 AVKICNICHSLLIQGQSCETCGIR-MHLPCVAKYFQSNAEPRCPHCNDYWPHE 65 (74)
T ss_dssp SSCBCSSSCCBCSSSEECSSSCCE-ECHHHHHHHSTTCSSCCCTTTCSCCCSC
T ss_pred CCCcCcchhhHcccCCccCCCCch-hhHHHHHHHHHhcCCCCCCCCcCcCCCC
Confidence 44689999987432 222378888 56888873 26799999987654
No 87
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=72.21 E-value=1.2 Score=36.08 Aligned_cols=30 Identities=23% Similarity=0.726 Sum_probs=23.8
Q ss_pred cccccccccc-ccceEE--ecCCCcccChhhHHc
Q 012197 418 KILCRICFEE-QINILL--LPCRHHILCRTCGEK 448 (468)
Q Consensus 418 ~~~C~IC~~~-~~~vv~--~PCgH~~~C~~Ca~~ 448 (468)
+..|.+|.+. ....+. ++|+|. +|..|...
T Consensus 3 e~~C~~C~~~~~~~av~~C~~C~~~-~C~~Cl~~ 35 (101)
T 2jun_A 3 KVLCQFCDQDPAQDAVKTCVTCEVS-YCDECLKA 35 (101)
T ss_dssp CCBCTTCCSSSCCBCCEEETTTTEE-ECHHHHHH
T ss_pred CCCCcCCCCCCCCCceEECCcCChH-HhHHHCHH
Confidence 4689999964 445554 899999 99999886
No 88
>2cs3_A Protein C14ORF4, MY039 protein; ZF-C3HC4 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.3
Probab=66.95 E-value=1.4 Score=34.82 Aligned_cols=31 Identities=26% Similarity=0.760 Sum_probs=27.0
Q ss_pred cccccccccccccceEEecCC----CcccChhhHHc
Q 012197 417 EKILCRICFEEQINILLLPCR----HHILCRTCGEK 448 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~PCg----H~~~C~~Ca~~ 448 (468)
....|.+|.++-.+.-|+.|- |. +|..|+..
T Consensus 14 a~l~CtlC~erLEdtHFVQCPsv~~Hk-FCFpCsr~ 48 (93)
T 2cs3_A 14 GPLCCTICHERLEDTHFVQCPSVPSHK-FCFPCSRE 48 (93)
T ss_dssp CSCCCSSSCSCCSSTTSEECSSCSSCE-ECHHHHHH
T ss_pred CeeEeecchhhhccCceeeCCCccCCe-eeccccHH
Confidence 446899999999999999995 66 99999886
No 89
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=30.40 E-value=22 Score=31.76 Aligned_cols=32 Identities=19% Similarity=0.326 Sum_probs=20.2
Q ss_pred ceEEecCCCcccChhhHHcCCCCCCCcccccCeeee
Q 012197 430 NILLLPCRHHILCRTCGEKCKKCPICRVFIEERLPI 465 (468)
Q Consensus 430 ~vv~~PCgH~~~C~~Ca~~l~~CPiCR~~I~~~iki 465 (468)
--+-..|||... . ..-..||+|..+-....++
T Consensus 138 ~~~C~~CG~i~~--~--~~p~~CP~Cg~~~~~F~~~ 169 (170)
T 3pwf_A 138 VYICPICGYTAV--D--EAPEYCPVCGAPKEKFVVF 169 (170)
T ss_dssp EEECTTTCCEEE--S--CCCSBCTTTCCBGGGCEEE
T ss_pred eeEeCCCCCeeC--C--CCCCCCCCCCCCHHHceec
Confidence 334457888743 1 2235899999887766543
No 90
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=24.26 E-value=26 Score=30.81 Aligned_cols=41 Identities=20% Similarity=0.606 Sum_probs=28.4
Q ss_pred ccccccccccc-----ccceEEecCCCcccChhhHHcCC-----CCCCCccc
Q 012197 417 EKILCRICFEE-----QINILLLPCRHHILCRTCGEKCK-----KCPICRVF 458 (468)
Q Consensus 417 ~~~~C~IC~~~-----~~~vv~~PCgH~~~C~~Ca~~l~-----~CPiCR~~ 458 (468)
+...|.+|... .+..+-.-|.|. +|..|..... .|-+|+..
T Consensus 67 ~~~~C~~C~~~fg~l~~~g~~C~~C~~~-VC~~C~~~~~~~~~W~C~vC~k~ 117 (153)
T 2zet_C 67 NETHCARCLQPYRLLLNSRRQCLECSLF-VCKSCSHAHPEEQGWLCDPCHLA 117 (153)
T ss_dssp GGTBCTTTCCBGGGCSSCCEECTTTCCE-ECGGGEECCSSSSSCEEHHHHHH
T ss_pred CCccchhhcCccccccCCCCcCCCCCch-hhcccccccCCCCcEeeHHHHHH
Confidence 56799999996 445566678887 7888885442 36677653
No 91
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=23.53 E-value=57 Score=30.59 Aligned_cols=45 Identities=22% Similarity=0.480 Sum_probs=30.1
Q ss_pred cccccccccccccceEEec-CCCcccChhhHHc------CCCCCCCcccccCe
Q 012197 417 EKILCRICFEEQINILLLP-CRHHILCRTCGEK------CKKCPICRVFIEER 462 (468)
Q Consensus 417 ~~~~C~IC~~~~~~vv~~P-CgH~~~C~~Ca~~------l~~CPiCR~~I~~~ 462 (468)
....|.+|++--..-.-=| |+|. +=..|..+ -.+||.|+.+.+..
T Consensus 179 ~i~~C~iC~~iv~~g~~C~~C~~~-~H~~C~~~~~~~~~~~~CP~C~~~W~~~ 230 (238)
T 3nw0_A 179 AVKICNICHSLLIQGQSCETCGIR-MHLPCVAKYFQSNAEPRCPHCNDYWPHE 230 (238)
T ss_dssp TCCBCTTTCSBCSSCEECSSSCCE-ECHHHHHHHTTTCSSCBCTTTCCBCCSC
T ss_pred CCCcCcchhhHHhCCcccCccChH-HHHHHHHHHHHhCCCCCCCCCCCCCCCC
Confidence 3568999999755333222 7766 44777765 24899999977654
Done!