Query 012198
Match_columns 468
No_of_seqs 266 out of 453
Neff 4.3
Searched_HMMs 46136
Date Fri Mar 29 00:05:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012198.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012198hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF14381 EDR1: Ethylene-respon 100.0 1.5E-72 3.2E-77 536.5 21.3 200 59-268 1-204 (204)
2 KOG0193 Serine/threonine prote 99.2 3.1E-11 6.6E-16 130.5 7.2 45 421-465 380-424 (678)
3 KOG0192 Tyrosine kinase specif 97.8 8.6E-06 1.9E-10 84.5 2.3 40 425-464 33-74 (362)
4 KOG2052 Activin A type IB rece 97.8 1.6E-05 3.4E-10 84.7 3.3 32 433-464 211-243 (513)
5 smart00460 TGc Transglutaminas 97.7 6E-05 1.3E-09 58.3 5.5 55 205-260 4-67 (68)
6 PF01841 Transglut_core: Trans 97.4 0.00017 3.6E-09 60.5 4.2 54 206-259 50-113 (113)
7 cd05107 PTKc_PDGFR_beta Cataly 97.3 0.00011 2.4E-09 76.2 2.5 39 426-464 30-76 (401)
8 COG5279 CYK3 Uncharacterized p 97.2 0.00046 1E-08 74.4 5.3 56 207-263 209-271 (521)
9 KOG0197 Tyrosine kinases [Sign 97.1 0.00015 3.2E-09 77.9 0.9 40 425-464 198-239 (468)
10 cd05104 PTKc_Kit Catalytic dom 97.0 0.00038 8.3E-09 70.6 2.6 38 427-464 29-74 (375)
11 cd05105 PTKc_PDGFR_alpha Catal 96.6 0.0016 3.5E-08 67.5 3.4 39 426-464 30-76 (400)
12 cd05106 PTKc_CSF-1R Catalytic 96.4 0.0019 4E-08 65.7 2.7 39 426-464 31-77 (374)
13 KOG0199 ACK and related non-re 95.7 0.0032 6.9E-08 70.9 0.4 39 426-464 103-147 (1039)
14 KOG0194 Protein tyrosine kinas 95.5 0.012 2.7E-07 63.6 4.0 32 425-456 149-180 (474)
15 PLN03225 Serine/threonine-prot 94.7 0.036 7.9E-07 60.7 4.7 38 429-466 128-172 (566)
16 PLN03224 probable serine/threo 94.6 0.034 7.3E-07 60.6 4.3 26 429-454 141-166 (507)
17 PLN00034 mitogen-activated pro 94.5 0.11 2.4E-06 51.8 7.5 37 428-464 69-108 (353)
18 cd05055 PTKc_PDGFR Catalytic d 94.4 0.031 6.7E-07 54.5 3.0 38 427-464 29-74 (302)
19 PTZ00426 cAMP-dependent protei 94.0 0.066 1.4E-06 53.8 4.5 38 427-464 24-65 (340)
20 KOG3653 Transforming growth fa 93.8 0.018 4E-07 62.4 0.1 33 433-465 210-243 (534)
21 PTZ00284 protein kinase; Provi 93.8 0.082 1.8E-06 55.4 4.9 37 428-464 124-163 (467)
22 KOG4278 Protein tyrosine kinas 93.7 0.032 6.9E-07 62.6 1.8 40 425-464 259-301 (1157)
23 KOG4257 Focal adhesion tyrosin 93.4 0.035 7.5E-07 62.3 1.4 33 425-457 381-413 (974)
24 KOG4721 Serine/threonine prote 93.2 0.013 2.9E-07 64.9 -2.0 41 425-465 116-157 (904)
25 KOG1187 Serine/threonine prote 93.0 0.073 1.6E-06 55.3 3.0 31 435-465 77-109 (361)
26 COG1305 Transglutaminase-like 92.9 0.5 1.1E-05 45.6 8.4 28 207-234 194-221 (319)
27 cd05596 STKc_ROCK Catalytic do 92.4 0.12 2.7E-06 52.4 3.8 39 426-464 36-77 (370)
28 PTZ00036 glycogen synthase kin 91.8 0.2 4.4E-06 52.5 4.7 34 430-463 63-99 (440)
29 KOG1095 Protein tyrosine kinas 91.6 0.15 3.3E-06 59.8 3.7 38 429-466 688-733 (1025)
30 cd05622 STKc_ROCK1 Catalytic d 91.2 0.22 4.8E-06 50.7 4.1 39 426-464 36-77 (371)
31 cd05621 STKc_ROCK2 Catalytic d 91.2 0.21 4.6E-06 50.9 3.9 38 427-464 37-77 (370)
32 PTZ00283 serine/threonine prot 90.7 0.31 6.6E-06 52.3 4.7 35 430-464 29-66 (496)
33 KOG1026 Nerve growth factor re 89.9 0.065 1.4E-06 61.0 -1.3 41 426-466 479-527 (774)
34 KOG1025 Epidermal growth facto 89.6 0.24 5.3E-06 57.3 2.9 31 434-464 697-734 (1177)
35 KOG1094 Discoidin domain recep 89.5 1.1 2.4E-05 50.4 7.7 35 429-463 534-570 (807)
36 KOG0196 Tyrosine kinase, EPH ( 89.2 0.26 5.6E-06 56.7 2.7 37 428-464 624-666 (996)
37 KOG0983 Mitogen-activated prot 89.1 0.47 1E-05 49.3 4.3 95 365-462 25-124 (391)
38 KOG4258 Insulin/growth factor 88.7 0.096 2.1E-06 60.1 -1.0 32 426-458 988-1019(1025)
39 KOG0200 Fibroblast/platelet-de 87.9 0.28 6.2E-06 54.2 2.0 40 427-466 290-339 (609)
40 KOG0694 Serine/threonine prote 87.6 0.62 1.3E-05 52.7 4.3 36 430-465 365-403 (694)
41 PRK09605 bifunctional UGMP fam 86.7 0.58 1.3E-05 50.6 3.5 33 427-459 324-359 (535)
42 PHA03209 serine/threonine kina 86.3 0.87 1.9E-05 45.9 4.3 30 433-462 66-98 (357)
43 PHA03207 serine/threonine kina 84.7 1.6 3.5E-05 44.7 5.4 33 431-463 90-127 (392)
44 PHA03210 serine/threonine kina 84.2 0.74 1.6E-05 49.3 2.8 26 433-458 148-173 (501)
45 cd06635 STKc_TAO1 Catalytic do 83.2 0.86 1.9E-05 44.7 2.6 32 433-464 25-59 (317)
46 KOG0663 Protein kinase PITSLRE 83.1 0.46 1E-05 50.3 0.7 26 433-458 76-101 (419)
47 KOG4236 Serine/threonine prote 82.7 0.75 1.6E-05 51.3 2.1 32 434-465 565-599 (888)
48 KOG0667 Dual-specificity tyros 81.1 1.6 3.5E-05 48.8 4.0 31 434-464 187-220 (586)
49 KOG0605 NDR and related serine 80.6 1.3 2.9E-05 48.9 3.1 35 430-464 138-175 (550)
50 smart00090 RIO RIO-like kinase 79.9 1.3 2.9E-05 43.2 2.6 29 436-464 31-63 (237)
51 KOG1024 Receptor-like protein 77.6 1.7 3.6E-05 47.2 2.7 33 426-458 277-309 (563)
52 PLN00113 leucine-rich repeat r 75.7 2 4.4E-05 49.0 2.9 30 435-464 692-724 (968)
53 PHA03211 serine/threonine kina 75.2 3.1 6.8E-05 44.6 4.0 29 434-462 170-201 (461)
54 PF00797 Acetyltransf_2: N-ace 74.5 4.8 0.0001 38.7 4.7 54 207-261 46-106 (240)
55 PF04473 DUF553: Transglutamin 73.7 7.4 0.00016 36.6 5.5 55 205-260 73-127 (153)
56 PRK04750 ubiB putative ubiquin 71.8 2.2 4.9E-05 47.1 1.9 32 432-464 119-153 (537)
57 KOG0032 Ca2+/calmodulin-depend 71.6 3.5 7.5E-05 43.6 3.2 32 434-465 36-70 (382)
58 PF13369 Transglut_core2: Tran 70.5 26 0.00056 32.1 8.3 105 136-261 6-110 (152)
59 KOG0582 Ste20-like serine/thre 70.3 6.5 0.00014 43.2 4.9 40 426-465 19-61 (516)
60 KOG0598 Ribosomal protein S6 k 69.0 4.1 8.9E-05 43.2 3.1 29 430-458 22-50 (357)
61 PHA03212 serine/threonine kina 68.8 6.4 0.00014 40.8 4.4 34 430-463 89-125 (391)
62 TIGR01982 UbiB 2-polyprenylphe 68.6 3.3 7.1E-05 44.2 2.3 25 439-463 123-149 (437)
63 KOG0592 3-phosphoinositide-dep 68.2 2 4.3E-05 47.8 0.6 34 431-464 71-107 (604)
64 PF03109 ABC1: ABC1 family; I 68.1 1.5 3.3E-05 38.7 -0.3 27 438-464 16-44 (119)
65 KOG0696 Serine/threonine prote 68.0 3.1 6.7E-05 45.5 2.0 37 429-465 345-384 (683)
66 PTZ00267 NIMA-related protein 63.9 8 0.00017 41.1 4.1 30 434-463 68-101 (478)
67 KOG0615 Serine/threonine prote 63.8 8 0.00017 42.1 4.0 32 434-465 173-207 (475)
68 KOG1165 Casein kinase (serine/ 58.7 5.9 0.00013 42.4 1.9 29 434-462 29-60 (449)
69 KOG0195 Integrin-linked kinase 58.5 1.9 4.1E-05 45.0 -1.6 33 429-461 186-218 (448)
70 PF02809 UIM: Ubiquitin intera 55.4 11 0.00024 23.6 2.0 15 23-37 2-16 (18)
71 KOG1035 eIF-2alpha kinase GCN2 53.7 3.6 7.8E-05 49.6 -0.7 34 428-464 477-513 (1351)
72 KOG0600 Cdc2-related protein k 51.6 5.2 0.00011 44.4 0.2 35 429-463 113-150 (560)
73 KOG0585 Ca2+/calmodulin-depend 50.1 11 0.00025 41.8 2.4 36 430-465 94-132 (576)
74 KOG0616 cAMP-dependent protein 49.8 9.7 0.00021 40.1 1.8 33 432-464 43-78 (355)
75 KOG1166 Mitotic checkpoint ser 49.7 18 0.00039 43.1 4.1 37 426-462 691-729 (974)
76 PF13095 FTA2: Kinetochore Sim 43.8 33 0.00071 33.9 4.4 34 433-466 37-72 (207)
77 KOG0577 Serine/threonine prote 43.6 15 0.00032 42.1 2.1 25 439-463 32-59 (948)
78 KOG0984 Mitogen-activated prot 43.5 21 0.00046 36.3 3.0 39 426-464 39-80 (282)
79 KOG1989 ARK protein kinase fam 41.3 38 0.00083 39.3 5.0 42 426-467 30-72 (738)
80 KOG0581 Mitogen-activated prot 40.2 20 0.00043 38.3 2.3 37 427-463 73-112 (364)
81 KOG1006 Mitogen-activated prot 40.1 6.3 0.00014 41.1 -1.3 38 427-464 58-98 (361)
82 PRK10359 lipopolysaccharide co 36.5 48 0.001 33.1 4.3 35 430-464 28-63 (232)
83 KOG1152 Signal transduction se 35.8 33 0.00071 39.3 3.2 38 427-464 552-595 (772)
84 PRK10941 hypothetical protein; 34.7 1.2E+02 0.0026 31.0 6.8 108 136-269 37-149 (269)
85 KOG0695 Serine/threonine prote 30.3 64 0.0014 35.0 4.2 37 426-462 243-279 (593)
86 PF13471 Transglut_core3: Tran 29.4 86 0.0019 27.2 4.3 42 209-250 57-98 (117)
87 KOG0612 Rho-associated, coiled 28.6 18 0.00038 43.9 -0.3 39 427-465 69-110 (1317)
88 KOG0586 Serine/threonine prote 28.5 57 0.0012 37.0 3.6 30 436-465 59-91 (596)
89 KOG0584 Serine/threonine prote 27.3 27 0.00058 39.7 0.9 20 435-454 42-61 (632)
90 PRK15047 N-hydroxyarylamine O- 25.8 1.2E+02 0.0027 31.0 5.2 55 206-261 65-125 (281)
91 KOG0986 G protein-coupled rece 25.6 47 0.001 37.1 2.3 30 428-457 180-209 (591)
92 KOG0610 Putative serine/threon 22.2 34 0.00073 37.5 0.4 38 427-464 71-111 (459)
93 KOG0574 STE20-like serine/thre 21.4 7.3 0.00016 41.3 -4.5 30 433-462 33-65 (502)
No 1
>PF14381 EDR1: Ethylene-responsive protein kinase Le-CTR1
Probab=100.00 E-value=1.5e-72 Score=536.46 Aligned_cols=200 Identities=52% Similarity=0.867 Sum_probs=188.6
Q ss_pred CcHHHHHHHHHhcCcccCCCCCCCceeeeecCCcccccccc-cc-cCCCCCCChhcccccCCCCCCceeEEEecCCCCcc
Q 012198 59 DSAETVSHRFWVNGCLSYFDRILDGFYLIHGMDPYTWSIGT-NQ-RDAGLIPPYKSLKAVDPCNNLSIKVILIDKSSDPN 136 (468)
Q Consensus 59 ~~ae~lS~ryW~~g~L~y~DkI~DGFYdI~g~dp~~w~~~~-dl-~~~grmPSL~~L~a~~~~~~~s~EVILVDr~~D~~ 136 (468)
+++|++|+|||++|+|+|+||||||||||+|++ |+ ++ .+++|||||++|+++++. ++++|||||||+.|+.
T Consensus 1 ~~~e~lS~r~W~~~~L~y~dki~DGFYdi~g~~------~~~~l~~~~~~~Psl~~L~~~~~~-~~~~EvIlVDr~~D~~ 73 (204)
T PF14381_consen 1 SSAESLSHRYWVNGCLSYDDKIPDGFYDIYGMD------CTNSLKEEFGRMPSLEDLQAVPPD-DSSREVILVDRRRDPS 73 (204)
T ss_pred CcHHHHHHHHHHcCCCCCCCcCCCCCcccccCC------CccccccccCCCCCHHHHhcCCCC-CCCeeEEEEccccCHH
Confidence 478999999999999999999999999999996 74 66 589999999999999855 9999999999999999
Q ss_pred HHHHHHHHHHHHcccc-CHHHHHHHHHHHHHhhcCCCCCCchhhhhHHHHHHHHHHHhhhCCeEEEeccccccchhhhHH
Q 012198 137 LKELHNRVLSLLCDRI-TAEEAVHQLANLVCNHMGGTTSTEEEEFDKQWSECAEHLKDCLNSVVLPIGSLSVGLCVHRAL 215 (468)
Q Consensus 137 L~~L~~~a~~l~~~l~-~~~~~v~~LA~lVad~MGG~v~~~~~~l~~~w~~~~~eLK~~l~S~ViPIG~Lk~GlcRHRAL 215 (468)
|++|+++|+++++++. ++++++++||+|||++|||++..++ ....+|++++.+||. +++++|||+|++|+||||||
T Consensus 74 L~~L~~~a~~~~~~~~~~~~~~v~~LA~lVa~~MGG~~~~~~-~~~~~w~~~s~~lk~--~s~~vplG~l~~G~~rhRAL 150 (204)
T PF14381_consen 74 LKELEQRAHELSKGLSTNTKELVQKLAKLVADRMGGPVSDAE-DMLFRWELRSEKLKE--NSGVVPLGSLRIGLCRHRAL 150 (204)
T ss_pred HHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHhCCCCCcch-hhhHHHHHHHHHHHh--CCCeEEEeeecccchHHHHH
Confidence 9999999999999998 6999999999999999999998544 444599998888988 89999999999999999999
Q ss_pred HHHHHhhhcCCCceEeccccccCC-CCCcceEEEeCCCeeEEEeCCCCCCcccC
Q 012198 216 LFKVLADLINLPCRIAKGCKYCRR-DDASSCLVQIGPDREYLVDLLEDPGVLSK 268 (468)
Q Consensus 216 LFKvLAD~IGLPCrLVRG~~Y~~~-dd~a~~lVk~~~~reYIVDLM~~PG~Li~ 268 (468)
|||||||+||||||||||++||+. ++.++|+|++++++|||||||++||+|+|
T Consensus 151 LFKvLAD~iglpCrLvrG~~y~g~~~~~a~~~V~~~~~~eyiVDLm~~PG~L~P 204 (204)
T PF14381_consen 151 LFKVLADRIGLPCRLVRGCYYCGWDDDDASNLVKFDDGREYIVDLMGAPGQLIP 204 (204)
T ss_pred HHHHHHHhcCCCceEEeeccCCccCCCCceEEEEcCCCcEEEEEcCCCCCCcCC
Confidence 999999999999999999999999 89999999999999999999999999997
No 2
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.18 E-value=3.1e-11 Score=130.47 Aligned_cols=45 Identities=36% Similarity=0.635 Sum_probs=41.1
Q ss_pred ccccccceeecCcceeeeeEecccceeeEEEEEeeCceeEEEeee
Q 012198 421 LYLEEEGLEIRWSELLIKKKIGEGSFGTVYHAEWRNSVSIFFFSI 465 (468)
Q Consensus 421 ~~~~~~~weI~~~eL~l~e~IGsG~FGtVyrg~W~G~vaVk~~~~ 465 (468)
.+.+.++|||+.+|+.++++||+|+|||||||+|||+||||++++
T Consensus 380 ~s~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whGdVAVK~Lnv 424 (678)
T KOG0193|consen 380 ASDSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHGDVAVKLLNV 424 (678)
T ss_pred CCccccccccCHHHhhccceeccccccceeecccccceEEEEEec
Confidence 334458999999999999999999999999999999999999985
No 3
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=97.81 E-value=8.6e-06 Score=84.49 Aligned_cols=40 Identities=40% Similarity=0.641 Sum_probs=36.8
Q ss_pred ccceeecCcceeeeeEecccceeeEEEEEeeCce--eEEEee
Q 012198 425 EEGLEIRWSELLIKKKIGEGSFGTVYHAEWRNSV--SIFFFS 464 (468)
Q Consensus 425 ~~~weI~~~eL~l~e~IGsG~FGtVyrg~W~G~v--aVk~~~ 464 (468)
..+|+|+|++|.+++.||+|+||+||||.|+|+. |||+++
T Consensus 33 ~~~~~i~~~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~ 74 (362)
T KOG0192|consen 33 LPEEEIDPDELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIIS 74 (362)
T ss_pred ccceecChHHhhhhhhcccCCceeEEEEEeCCceeEEEEEec
Confidence 3589999999999999999999999999999998 788775
No 4
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=97.76 E-value=1.6e-05 Score=84.69 Aligned_cols=32 Identities=34% Similarity=0.877 Sum_probs=29.9
Q ss_pred cceeeeeEecccceeeEEEEEeeCc-eeEEEee
Q 012198 433 SELLIKKKIGEGSFGTVYHAEWRNS-VSIFFFS 464 (468)
Q Consensus 433 ~eL~l~e~IGsG~FGtVyrg~W~G~-vaVk~~~ 464 (468)
.+|+|.|.||+|.||+||||+|||. ||||+|+
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~ 243 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFS 243 (513)
T ss_pred heeEEEEEecCccccceeeccccCCceEEEEec
Confidence 6899999999999999999999987 5899996
No 5
>smart00460 TGc Transglutaminase/protease-like homologues. Transglutaminases are enzymes that establish covalent links between proteins. A subset of transglutaminase homologues appear to catalyse the reverse reaction, the hydrolysis of peptide bonds. Proteins with this domain are both extracellular and intracellular, and it is likely that the eukaryotic intracellular proteins are involved in signalling events.
Probab=97.74 E-value=6e-05 Score=58.33 Aligned_cols=55 Identities=22% Similarity=0.233 Sum_probs=43.4
Q ss_pred ccccchhhhHHHHHHHhhhcCCCceEeccccccC---------CCCCcceEEEeCCCeeEEEeCC
Q 012198 205 LSVGLCVHRALLFKVLADLINLPCRIAKGCKYCR---------RDDASSCLVQIGPDREYLVDLL 260 (468)
Q Consensus 205 Lk~GlcRHRALLFKvLAD~IGLPCrLVRG~~Y~~---------~dd~a~~lVk~~~~reYIVDLM 260 (468)
-+.|.|.+.|.||+.|+-.+|||||++.|..-.. ....+|+.|.++ +++|.+|..
T Consensus 4 ~~~G~C~~~a~l~~~llr~~GIpar~v~g~~~~~~~~~~~~~~~~~H~W~ev~~~-~~W~~~D~~ 67 (68)
T smart00460 4 TKYGTCGEFAALFVALLRSLGIPARVVSGYLKAPDTIGGLRSIWEAHAWAEVYLE-GGWVPVDPT 67 (68)
T ss_pred ccceeeHHHHHHHHHHHHHCCCCeEEEeeeecCCCCCcccccCCCcEEEEEEEEC-CCeEEEeCC
Confidence 4689999999999999999999999999943221 223357777775 789999964
No 6
>PF01841 Transglut_core: Transglutaminase-like superfamily; InterPro: IPR002931 This domain is found in many proteins known to have transglutaminase activity, i.e. which cross-link proteins through an acyl-transfer reaction between the gamma-carboxamide group of peptide-bound glutamine and the epsilon-amino group of peptide-bound lysine, resulting in a epsilon-(gamma-glutamyl)lysine isopeptide bond. Tranglutaminases have been found in a diverse range of species, from bacteria through to mammals. The enzymes require calcium binding and their activity leads to post-translational modification of proteins through acyl-transfer reactions, involving peptidyl glutamine residues as acyl donors and a variety of primary amines as acyl acceptors, with the generation of proteinase resistant isopeptide bonds []. Sequence conservation in this superfamily primarily involves three motifs that centre around conserved cysteine, histidine, and aspartate residues that form the catalytic triad in the structurally characterised transglutaminase, the human blood clotting factor XIIIa' []. On the basis of the experimentally demonstrated activity of the Methanobacterium phage psiM2 pseudomurein endoisopeptidase [], it is proposed that many, if not all, microbial homologs of the transglutaminases are proteases and that the eukaryotic transglutaminases have evolved from an ancestral protease []. A subunit of plasma Factor XIII revealed that each Factor XIIIA subunit is composed of four domains (termed N-terminal beta-sandwich, core domain (containing the catalytic and the regulatory sites), and C-terminal beta-barrels 1 and 2) and that two monomers assemble into the native dimer through the surfaces in domains 1 and 2, in opposite orientation. This organisation in four domains is highly conserved during evolution among transglutaminase isoforms [].; PDB: 2F4M_A 2F4O_A 1GGY_B 1FIE_B 1GGU_B 1GGT_B 1F13_A 1QRK_B 1EVU_A 1EX0_B ....
Probab=97.41 E-value=0.00017 Score=60.51 Aligned_cols=54 Identities=22% Similarity=0.251 Sum_probs=41.3
Q ss_pred cccchhhhHHHHHHHhhhcCCCceEeccccccC----------CCCCcceEEEeCCCeeEEEeC
Q 012198 206 SVGLCVHRALLFKVLADLINLPCRIAKGCKYCR----------RDDASSCLVQIGPDREYLVDL 259 (468)
Q Consensus 206 k~GlcRHRALLFKvLAD~IGLPCrLVRG~~Y~~----------~dd~a~~lVk~~~~reYIVDL 259 (468)
+.|.|.+.|.||..|+-.+|||||+|.|..... .+..+|+.|.+++++++.+|.
T Consensus 50 ~~G~C~~~a~l~~allr~~Gipar~v~g~~~~~~~~~~~~~~~~~~H~w~ev~~~~~~W~~~Dp 113 (113)
T PF01841_consen 50 GRGDCEDYASLFVALLRALGIPARVVSGYVKGPDPDGDYSVDGNDNHAWVEVYLPGGGWIPLDP 113 (113)
T ss_dssp EEESHHHHHHHHHHHHHHHT--EEEEEEEEEECSSTTCTSTSSEEEEEEEEEEETTTEEEEEET
T ss_pred CCCccHHHHHHHHHHHhhCCCceEEEEEEcCCccccccccCCCCCCEEEEEEEEcCCcEEEcCC
Confidence 459999999999999999999999999943211 012367888888889999984
No 7
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=97.32 E-value=0.00011 Score=76.22 Aligned_cols=39 Identities=23% Similarity=0.484 Sum_probs=35.4
Q ss_pred cceeecCcceeeeeEecccceeeEEEEEeeC--------ceeEEEee
Q 012198 426 EGLEIRWSELLIKKKIGEGSFGTVYHAEWRN--------SVSIFFFS 464 (468)
Q Consensus 426 ~~weI~~~eL~l~e~IGsG~FGtVyrg~W~G--------~vaVk~~~ 464 (468)
..|+|+++++.++++||+|+||+||+|.|+| .+|||+++
T Consensus 30 ~~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~ 76 (401)
T cd05107 30 SAWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLK 76 (401)
T ss_pred CcceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecC
Confidence 4699999999999999999999999999987 37888875
No 8
>COG5279 CYK3 Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain [Cell division and chromosome partitioning]
Probab=97.17 E-value=0.00046 Score=74.39 Aligned_cols=56 Identities=32% Similarity=0.513 Sum_probs=45.8
Q ss_pred ccchhhhHHHHHHHhhhcCCCceEecccc-----ccCC--CCCcceEEEeCCCeeEEEeCCCCC
Q 012198 207 VGLCVHRALLFKVLADLINLPCRIAKGCK-----YCRR--DDASSCLVQIGPDREYLVDLLEDP 263 (468)
Q Consensus 207 ~GlcRHRALLFKvLAD~IGLPCrLVRG~~-----Y~~~--dd~a~~lVk~~~~reYIVDLM~~P 263 (468)
-++|-..|.|||.||-..||||.+|+|.- |++. =..+||+|++++ ..|+||..+.-
T Consensus 209 eavCtgYa~lfK~lcn~lgIp~~iIegf~k~~~~~~~~~~iNHaWN~VkiD~-~yy~VDtTwgd 271 (521)
T COG5279 209 EAVCTGYAELFKELCNALGIPCEIIEGFLKSPIYYTRDININHAWNIVKIDN-EYYLVDTTWGD 271 (521)
T ss_pred ccccchHHHHHHHHHHhcCCceEEEeecccccccccCCccccceeeEEEECC-eEEEEeeecCC
Confidence 47899999999999999999999999951 1211 144899999966 79999999863
No 9
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=97.12 E-value=0.00015 Score=77.89 Aligned_cols=40 Identities=30% Similarity=0.615 Sum_probs=35.9
Q ss_pred ccceeecCcceeeeeEecccceeeEEEEEeeCc--eeEEEee
Q 012198 425 EEGLEIRWSELLIKKKIGEGSFGTVYHAEWRNS--VSIFFFS 464 (468)
Q Consensus 425 ~~~weI~~~eL~l~e~IGsG~FGtVyrg~W~G~--vaVk~~~ 464 (468)
.+.|+|+.++|.+.++||+|.||+||.|.|+|. +|||.+.
T Consensus 198 ~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik 239 (468)
T KOG0197|consen 198 RDPWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIK 239 (468)
T ss_pred cCCeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEe
Confidence 568999999999999999999999999999998 4666653
No 10
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=97.00 E-value=0.00038 Score=70.60 Aligned_cols=38 Identities=26% Similarity=0.413 Sum_probs=34.1
Q ss_pred ceeecCcceeeeeEecccceeeEEEEEeeC--------ceeEEEee
Q 012198 427 GLEIRWSELLIKKKIGEGSFGTVYHAEWRN--------SVSIFFFS 464 (468)
Q Consensus 427 ~weI~~~eL~l~e~IGsG~FGtVyrg~W~G--------~vaVk~~~ 464 (468)
.|++++++++++++||+|+||+||+|.|.+ .+|||+++
T Consensus 29 ~~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~ 74 (375)
T cd05104 29 KWEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLK 74 (375)
T ss_pred ccccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEecc
Confidence 799999999999999999999999999864 46788775
No 11
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=96.58 E-value=0.0016 Score=67.48 Aligned_cols=39 Identities=21% Similarity=0.372 Sum_probs=34.5
Q ss_pred cceeecCcceeeeeEecccceeeEEEEEeeCc--------eeEEEee
Q 012198 426 EGLEIRWSELLIKKKIGEGSFGTVYHAEWRNS--------VSIFFFS 464 (468)
Q Consensus 426 ~~weI~~~eL~l~e~IGsG~FGtVyrg~W~G~--------vaVk~~~ 464 (468)
..|+++.++++++++||+|+||+||+|.+.+. +|||++.
T Consensus 30 ~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~ 76 (400)
T cd05105 30 SRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLK 76 (400)
T ss_pred CceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecC
Confidence 47999999999999999999999999998653 6788774
No 12
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=96.43 E-value=0.0019 Score=65.73 Aligned_cols=39 Identities=28% Similarity=0.412 Sum_probs=34.6
Q ss_pred cceeecCcceeeeeEecccceeeEEEEEeeC--------ceeEEEee
Q 012198 426 EGLEIRWSELLIKKKIGEGSFGTVYHAEWRN--------SVSIFFFS 464 (468)
Q Consensus 426 ~~weI~~~eL~l~e~IGsG~FGtVyrg~W~G--------~vaVk~~~ 464 (468)
+.|+++++++++++.||+|+||+||++.|.+ .+|||++.
T Consensus 31 ~~~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~ 77 (374)
T cd05106 31 EKWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLK 77 (374)
T ss_pred ccccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEecc
Confidence 5799999999999999999999999999864 47888764
No 13
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=95.70 E-value=0.0032 Score=70.87 Aligned_cols=39 Identities=26% Similarity=0.438 Sum_probs=33.8
Q ss_pred cceeecCcceeeeeEecccceeeEEEEEeeCc------eeEEEee
Q 012198 426 EGLEIRWSELLIKKKIGEGSFGTVYHAEWRNS------VSIFFFS 464 (468)
Q Consensus 426 ~~weI~~~eL~l~e~IGsG~FGtVyrg~W~G~------vaVk~~~ 464 (468)
..+-|+-++|.++|+||+|+||.|+||.|... ||||.+.
T Consensus 103 lkclIpee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr 147 (1039)
T KOG0199|consen 103 LKCLIPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLR 147 (1039)
T ss_pred cceeccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEecc
Confidence 36789999999999999999999999999742 6788764
No 14
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=95.51 E-value=0.012 Score=63.62 Aligned_cols=32 Identities=31% Similarity=0.654 Sum_probs=30.1
Q ss_pred ccceeecCcceeeeeEecccceeeEEEEEeeC
Q 012198 425 EEGLEIRWSELLIKKKIGEGSFGTVYHAEWRN 456 (468)
Q Consensus 425 ~~~weI~~~eL~l~e~IGsG~FGtVyrg~W~G 456 (468)
-..|+|.-+++.+.++||+|.||+||+|++.-
T Consensus 149 r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~ 180 (474)
T KOG0194|consen 149 RQKWELSHSDIELGKKLGEGAFGEVFKGKLKL 180 (474)
T ss_pred ccccEEeccCccccceeecccccEEEEEEEEe
Confidence 36899999999999999999999999999985
No 15
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=94.67 E-value=0.036 Score=60.67 Aligned_cols=38 Identities=32% Similarity=0.560 Sum_probs=31.0
Q ss_pred eecCcceeeeeEecccceeeEEEEEeeCc-------eeEEEeeee
Q 012198 429 EIRWSELLIKKKIGEGSFGTVYHAEWRNS-------VSIFFFSIY 466 (468)
Q Consensus 429 eI~~~eL~l~e~IGsG~FGtVyrg~W~G~-------vaVk~~~~~ 466 (468)
....+++++.++||+|+||+||+|.+..+ +|||.++.|
T Consensus 128 ~~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~ 172 (566)
T PLN03225 128 SFKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEY 172 (566)
T ss_pred CCccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEeccc
Confidence 34557788999999999999999999654 788877654
No 16
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=94.62 E-value=0.034 Score=60.55 Aligned_cols=26 Identities=19% Similarity=0.496 Sum_probs=23.0
Q ss_pred eecCcceeeeeEecccceeeEEEEEe
Q 012198 429 EIRWSELLIKKKIGEGSFGTVYHAEW 454 (468)
Q Consensus 429 eI~~~eL~l~e~IGsG~FGtVyrg~W 454 (468)
.+..+++.+.++||+|+||+||+|.+
T Consensus 141 r~~~d~F~i~~~LG~GgFG~VYkG~~ 166 (507)
T PLN03224 141 RWSSDDFQLRDKLGGGNFGITFEGLR 166 (507)
T ss_pred CccccCceEeeEeecCCCeEEEEEEe
Confidence 34578999999999999999999976
No 17
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=94.53 E-value=0.11 Score=51.83 Aligned_cols=37 Identities=30% Similarity=0.335 Sum_probs=30.2
Q ss_pred eeecCcceeeeeEecccceeeEEEEEeeCc---eeEEEee
Q 012198 428 LEIRWSELLIKKKIGEGSFGTVYHAEWRNS---VSIFFFS 464 (468)
Q Consensus 428 weI~~~eL~l~e~IGsG~FGtVyrg~W~G~---vaVk~~~ 464 (468)
.....+++++.++||+|+||+||+|.+..+ +|||++.
T Consensus 69 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~ 108 (353)
T PLN00034 69 AAKSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIY 108 (353)
T ss_pred CCCCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEe
Confidence 445668888999999999999999998743 6788764
No 18
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=94.36 E-value=0.031 Score=54.46 Aligned_cols=38 Identities=26% Similarity=0.406 Sum_probs=32.4
Q ss_pred ceeecCcceeeeeEecccceeeEEEEEeeC--------ceeEEEee
Q 012198 427 GLEIRWSELLIKKKIGEGSFGTVYHAEWRN--------SVSIFFFS 464 (468)
Q Consensus 427 ~weI~~~eL~l~e~IGsG~FGtVyrg~W~G--------~vaVk~~~ 464 (468)
.|.+.++++++.+.||+|+||+||++.+.+ .+|||.++
T Consensus 29 ~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~ 74 (302)
T cd05055 29 KWEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLK 74 (302)
T ss_pred cccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecC
Confidence 689999999999999999999999999753 35677654
No 19
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=93.99 E-value=0.066 Score=53.84 Aligned_cols=38 Identities=29% Similarity=0.567 Sum_probs=31.7
Q ss_pred ceeecCcceeeeeEecccceeeEEEEEeeCc----eeEEEee
Q 012198 427 GLEIRWSELLIKKKIGEGSFGTVYHAEWRNS----VSIFFFS 464 (468)
Q Consensus 427 ~weI~~~eL~l~e~IGsG~FGtVyrg~W~G~----vaVk~~~ 464 (468)
.+.+..++.++.+.||+|+||+||+|.+++. +|||.+.
T Consensus 24 ~~~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~ 65 (340)
T PTZ00426 24 KNKMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFE 65 (340)
T ss_pred CCCCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEE
Confidence 4667778899999999999999999998754 5777764
No 20
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=93.79 E-value=0.018 Score=62.35 Aligned_cols=33 Identities=33% Similarity=0.581 Sum_probs=29.3
Q ss_pred cceeeeeEecccceeeEEEEEeeCc-eeEEEeee
Q 012198 433 SELLIKKKIGEGSFGTVYHAEWRNS-VSIFFFSI 465 (468)
Q Consensus 433 ~eL~l~e~IGsG~FGtVyrg~W~G~-vaVk~~~~ 465 (468)
..|+|.+.||+|+||+||+|..++. ||||+|..
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~ 243 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPE 243 (534)
T ss_pred CchhhHHHhhcCccceeehhhccCceeEEEecCH
Confidence 5788999999999999999999976 68999863
No 21
>PTZ00284 protein kinase; Provisional
Probab=93.77 E-value=0.082 Score=55.39 Aligned_cols=37 Identities=24% Similarity=0.372 Sum_probs=29.5
Q ss_pred eeecCcceeeeeEecccceeeEEEEEeeC---ceeEEEee
Q 012198 428 LEIRWSELLIKKKIGEGSFGTVYHAEWRN---SVSIFFFS 464 (468)
Q Consensus 428 weI~~~eL~l~e~IGsG~FGtVyrg~W~G---~vaVk~~~ 464 (468)
.++.....++.++||+|+||+||+|.... .+|||++.
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~ 163 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVR 163 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEe
Confidence 34455678889999999999999998754 37899875
No 22
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=93.68 E-value=0.032 Score=62.61 Aligned_cols=40 Identities=25% Similarity=0.680 Sum_probs=35.7
Q ss_pred ccceeecCcceeeeeEecccceeeEEEEEeeC---ceeEEEee
Q 012198 425 EEGLEIRWSELLIKKKIGEGSFGTVYHAEWRN---SVSIFFFS 464 (468)
Q Consensus 425 ~~~weI~~~eL~l~e~IGsG~FGtVyrg~W~G---~vaVk~~~ 464 (468)
.+.||....||.++.+||-|.||+||.|.|+. ++|||.++
T Consensus 259 ~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLK 301 (1157)
T KOG4278|consen 259 ADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK 301 (1157)
T ss_pred cchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhh
Confidence 47899999999999999999999999999985 46787664
No 23
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=93.40 E-value=0.035 Score=62.33 Aligned_cols=33 Identities=33% Similarity=0.661 Sum_probs=31.0
Q ss_pred ccceeecCcceeeeeEecccceeeEEEEEeeCc
Q 012198 425 EEGLEIRWSELLIKKKIGEGSFGTVYHAEWRNS 457 (468)
Q Consensus 425 ~~~weI~~~eL~l~e~IGsG~FGtVyrg~W~G~ 457 (468)
..+++|..+.++++++||.|-||.||.|.|+..
T Consensus 381 ~rnyel~Re~Itl~r~iG~GqFGdVy~gvYt~~ 413 (974)
T KOG4257|consen 381 VRNYELRRELITLKRLIGEGQFGDVYKGVYTDP 413 (974)
T ss_pred CCcceeehhhccHHHhhcCCcccceeeeEeccc
Confidence 468999999999999999999999999999877
No 24
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=93.25 E-value=0.013 Score=64.91 Aligned_cols=41 Identities=27% Similarity=0.337 Sum_probs=36.3
Q ss_pred ccceeecCcceeeeeEecccceeeEEEEEeeCc-eeEEEeee
Q 012198 425 EEGLEIRWSELLIKKKIGEGSFGTVYHAEWRNS-VSIFFFSI 465 (468)
Q Consensus 425 ~~~weI~~~eL~l~e~IGsG~FGtVyrg~W~G~-vaVk~~~~ 465 (468)
.+.|||||++|.-+|-||+|+-|.||+|+.++. ||||+.+.
T Consensus 116 ~e~WeiPFe~IsELeWlGSGaQGAVF~Grl~netVAVKKV~e 157 (904)
T KOG4721|consen 116 EELWEIPFEEISELEWLGSGAQGAVFLGRLHNETVAVKKVRE 157 (904)
T ss_pred hhhccCCHHHhhhhhhhccCcccceeeeeccCceehhHHHhh
Confidence 367999999999999999999999999999976 57887653
No 25
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=93.00 E-value=0.073 Score=55.31 Aligned_cols=31 Identities=35% Similarity=0.512 Sum_probs=25.3
Q ss_pred eeeeeEecccceeeEEEEEeeC--ceeEEEeee
Q 012198 435 LLIKKKIGEGSFGTVYHAEWRN--SVSIFFFSI 465 (468)
Q Consensus 435 L~l~e~IGsG~FGtVyrg~W~G--~vaVk~~~~ 465 (468)
+.-..+||+|+||+||||...+ .+|||.++.
T Consensus 77 Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~ 109 (361)
T KOG1187|consen 77 FSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSS 109 (361)
T ss_pred CchhcceecCCCeEEEEEEECCCCEEEEEEecC
Confidence 3334699999999999999998 578997764
No 26
>COG1305 Transglutaminase-like enzymes, putative cysteine proteases [Amino acid transport and metabolism]
Probab=92.88 E-value=0.5 Score=45.60 Aligned_cols=28 Identities=29% Similarity=0.478 Sum_probs=27.2
Q ss_pred ccchhhhHHHHHHHhhhcCCCceEeccc
Q 012198 207 VGLCVHRALLFKVLADLINLPCRIAKGC 234 (468)
Q Consensus 207 ~GlcRHRALLFKvLAD~IGLPCrLVRG~ 234 (468)
.|.|+|-|-||=.||=..|||||+|.|.
T Consensus 194 ~G~C~d~a~l~val~Ra~GIpAR~V~Gy 221 (319)
T COG1305 194 RGVCRDFAHLLVALLRAAGIPARYVSGY 221 (319)
T ss_pred CcccccHHHHHHHHHHHcCCcceeeecc
Confidence 9999999999999999999999999993
No 27
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=92.44 E-value=0.12 Score=52.37 Aligned_cols=39 Identities=23% Similarity=0.411 Sum_probs=33.0
Q ss_pred cceeecCcceeeeeEecccceeeEEEEEeeC---ceeEEEee
Q 012198 426 EGLEIRWSELLIKKKIGEGSFGTVYHAEWRN---SVSIFFFS 464 (468)
Q Consensus 426 ~~weI~~~eL~l~e~IGsG~FGtVyrg~W~G---~vaVk~~~ 464 (468)
..+++..++.++.++||+|+||+||++.... .+|||+++
T Consensus 36 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~ 77 (370)
T cd05596 36 TKLRMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLS 77 (370)
T ss_pred ccCCCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEE
Confidence 4677888999999999999999999998764 36788775
No 28
>PTZ00036 glycogen synthase kinase; Provisional
Probab=91.85 E-value=0.2 Score=52.47 Aligned_cols=34 Identities=32% Similarity=0.378 Sum_probs=27.5
Q ss_pred ecCcceeeeeEecccceeeEEEEEeeC---ceeEEEe
Q 012198 430 IRWSELLIKKKIGEGSFGTVYHAEWRN---SVSIFFF 463 (468)
Q Consensus 430 I~~~eL~l~e~IGsG~FGtVyrg~W~G---~vaVk~~ 463 (468)
++....+++++||+|+||+||+|.+.. .+|||.+
T Consensus 63 ~~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i 99 (440)
T PTZ00036 63 SPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKV 99 (440)
T ss_pred CcCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEE
Confidence 345678889999999999999999864 3677765
No 29
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=91.65 E-value=0.15 Score=59.83 Aligned_cols=38 Identities=21% Similarity=0.505 Sum_probs=31.8
Q ss_pred eecCcceeeeeEecccceeeEEEEEeeCc--------eeEEEeeee
Q 012198 429 EIRWSELLIKKKIGEGSFGTVYHAEWRNS--------VSIFFFSIY 466 (468)
Q Consensus 429 eI~~~eL~l~e~IGsG~FGtVyrg~W~G~--------vaVk~~~~~ 466 (468)
+++++.+++.+.||+|.||.||+|.+.+. +|||.+..+
T Consensus 688 ~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~ 733 (1025)
T KOG1095|consen 688 EVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL 733 (1025)
T ss_pred cCChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc
Confidence 47799999999999999999999999853 567766544
No 30
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=91.23 E-value=0.22 Score=50.67 Aligned_cols=39 Identities=23% Similarity=0.443 Sum_probs=33.1
Q ss_pred cceeecCcceeeeeEecccceeeEEEEEeeCc---eeEEEee
Q 012198 426 EGLEIRWSELLIKKKIGEGSFGTVYHAEWRNS---VSIFFFS 464 (468)
Q Consensus 426 ~~weI~~~eL~l~e~IGsG~FGtVyrg~W~G~---vaVk~~~ 464 (468)
.++++..++.++.+.||+|+||+||++.+..+ +|+|++.
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~ 77 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLS 77 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEE
Confidence 46778889999999999999999999999754 5677765
No 31
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=91.19 E-value=0.21 Score=50.87 Aligned_cols=38 Identities=26% Similarity=0.447 Sum_probs=31.4
Q ss_pred ceeecCcceeeeeEecccceeeEEEEEeeCc---eeEEEee
Q 012198 427 GLEIRWSELLIKKKIGEGSFGTVYHAEWRNS---VSIFFFS 464 (468)
Q Consensus 427 ~weI~~~eL~l~e~IGsG~FGtVyrg~W~G~---vaVk~~~ 464 (468)
..++..++.++.++||+|+||+||++.+..+ +|+|++.
T Consensus 37 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~ 77 (370)
T cd05621 37 KLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLS 77 (370)
T ss_pred hcCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEE
Confidence 4566678889999999999999999999754 5778765
No 32
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=90.74 E-value=0.31 Score=52.28 Aligned_cols=35 Identities=20% Similarity=0.289 Sum_probs=27.8
Q ss_pred ecCcceeeeeEecccceeeEEEEEeeC---ceeEEEee
Q 012198 430 IRWSELLIKKKIGEGSFGTVYHAEWRN---SVSIFFFS 464 (468)
Q Consensus 430 I~~~eL~l~e~IGsG~FGtVyrg~W~G---~vaVk~~~ 464 (468)
..-+..++.+.||+|+||+||++.+.. .+|||++.
T Consensus 29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~ 66 (496)
T PTZ00283 29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVD 66 (496)
T ss_pred ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEe
Confidence 334577789999999999999999853 36888774
No 33
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=89.87 E-value=0.065 Score=61.05 Aligned_cols=41 Identities=34% Similarity=0.498 Sum_probs=36.0
Q ss_pred cceeecCcceeeeeEecccceeeEEEEEeeCc--------eeEEEeeee
Q 012198 426 EGLEIRWSELLIKKKIGEGSFGTVYHAEWRNS--------VSIFFFSIY 466 (468)
Q Consensus 426 ~~weI~~~eL~l~e~IGsG~FGtVyrg~W~G~--------vaVk~~~~~ 466 (468)
.--+|+.++|++.++||.|.||+||.|+..|. ||||.++.+
T Consensus 479 ~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~ 527 (774)
T KOG1026|consen 479 KVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK 527 (774)
T ss_pred ceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc
Confidence 45799999999999999999999999999886 578877754
No 34
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=89.61 E-value=0.24 Score=57.28 Aligned_cols=31 Identities=42% Similarity=0.699 Sum_probs=24.4
Q ss_pred ceeeeeEecccceeeEEEEEeeCc-------eeEEEee
Q 012198 434 ELLIKKKIGEGSFGTVYHAEWRNS-------VSIFFFS 464 (468)
Q Consensus 434 eL~l~e~IGsG~FGtVyrg~W~G~-------vaVk~~~ 464 (468)
|+.....||+|.|||||+|.|--. ||||++.
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~ 734 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLI 734 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEee
Confidence 566677999999999999999733 5566654
No 35
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=89.47 E-value=1.1 Score=50.44 Aligned_cols=35 Identities=40% Similarity=0.562 Sum_probs=31.9
Q ss_pred eecCcceeeeeEecccceeeEEEEEeeCc--eeEEEe
Q 012198 429 EIRWSELLIKKKIGEGSFGTVYHAEWRNS--VSIFFF 463 (468)
Q Consensus 429 eI~~~eL~l~e~IGsG~FGtVyrg~W~G~--vaVk~~ 463 (468)
|+|.+-|.++|+||+|-||+|+...-.|. +|||.+
T Consensus 534 EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~L 570 (807)
T KOG1094|consen 534 EFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKIL 570 (807)
T ss_pred hcchhheehhhhhcCcccceeEEEEecCceEEEEeec
Confidence 79999999999999999999999999994 577765
No 36
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=89.19 E-value=0.26 Score=56.69 Aligned_cols=37 Identities=35% Similarity=0.445 Sum_probs=32.1
Q ss_pred eeecCcceeeeeEecccceeeEEEEEee--C----ceeEEEee
Q 012198 428 LEIRWSELLIKKKIGEGSFGTVYHAEWR--N----SVSIFFFS 464 (468)
Q Consensus 428 weI~~~eL~l~e~IGsG~FGtVyrg~W~--G----~vaVk~~~ 464 (468)
-||+.+-+.+.+.||+|.||+|++|..+ | .||||.++
T Consensus 624 kEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK 666 (996)
T KOG0196|consen 624 KEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLK 666 (996)
T ss_pred hhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeec
Confidence 3899999999999999999999999887 3 36788765
No 37
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=89.11 E-value=0.47 Score=49.26 Aligned_cols=95 Identities=19% Similarity=0.265 Sum_probs=56.9
Q ss_pred cCCCccCCCCCCCCCCCcccCCCCcccccccCCCcccCccccccc-ccccccccccccccc-ccceeecCcceeeeeEec
Q 012198 365 DSSNFIKGPLLRSPVKPFRHRKSHETSAFSTLKPYVTNNHLLMEA-NLSVMSTSNRELYLE-EEGLEIRWSELLIKKKIG 442 (468)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~q~~~~~~~~~~~~~-~~~weI~~~eL~l~e~IG 442 (468)
.+.++..+.|++...||.+|+... ..-|....+.+.+-+-.+. -|..- +....+.+. -+.+-.+..||++...||
T Consensus 25 g~~~~~~~~i~q~~~pp~~~~tp~--g~pS~s~~d~~~~al~~~~~e~~~~-~~tg~lti~~g~r~~~dindl~~l~dlG 101 (391)
T KOG0983|consen 25 GSRSPSGESIPQHPTPPARHRTPL--GLPSTSSTDRSMEALEIDAKEQEIM-KQTGYLTIGGGQRYQADINDLENLGDLG 101 (391)
T ss_pred CCCCCCCCccccCCCCCCCCCCCC--CCCCCCCCcchHHHHHHHhhhcccc-CCceeEEecCCcccccChHHhhhHHhhc
Confidence 466677888999999998876532 2122222333332221111 11111 111223333 345567788999999999
Q ss_pred ccceeeEEEEEeeCc---eeEEE
Q 012198 443 EGSFGTVYHAEWRNS---VSIFF 462 (468)
Q Consensus 443 sG~FGtVyrg~W~G~---vaVk~ 462 (468)
+|+.|+|++..++.+ .|||.
T Consensus 102 sGtcG~V~k~~~rs~~~iiAVK~ 124 (391)
T KOG0983|consen 102 SGTCGQVWKMRFRSTGHIIAVKQ 124 (391)
T ss_pred CCCccceEEEEEcccceEEEEEe
Confidence 999999999999874 25654
No 38
>KOG4258 consensus Insulin/growth factor receptor (contains protein kinase domain) [Signal transduction mechanisms]
Probab=88.67 E-value=0.096 Score=60.14 Aligned_cols=32 Identities=31% Similarity=0.648 Sum_probs=28.9
Q ss_pred cceeecCcceeeeeEecccceeeEEEEEeeCce
Q 012198 426 EGLEIRWSELLIKKKIGEGSFGTVYHAEWRNSV 458 (468)
Q Consensus 426 ~~weI~~~eL~l~e~IGsG~FGtVyrg~W~G~v 458 (468)
++||...+ +.+++.||+|+||+||.|.=++.+
T Consensus 988 deWe~~r~-it~~relg~gsfg~Vy~g~~nnvv 1019 (1025)
T KOG4258|consen 988 DEWEVSRE-ITLGRELGQGSFGMVYEGNANNVV 1019 (1025)
T ss_pred hHHHHHHH-HhhhhhhccCccceEEEecCCccc
Confidence 78999999 999999999999999999876644
No 39
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=87.93 E-value=0.28 Score=54.24 Aligned_cols=40 Identities=30% Similarity=0.400 Sum_probs=34.0
Q ss_pred ceeecCcceeeeeEecccceeeEEEEEeeC----------ceeEEEeeee
Q 012198 427 GLEIRWSELLIKKKIGEGSFGTVYHAEWRN----------SVSIFFFSIY 466 (468)
Q Consensus 427 ~weI~~~eL~l~e~IGsG~FGtVyrg~W~G----------~vaVk~~~~~ 466 (468)
.|||+++.|.+.+.||+|.||.|++|.-+| .+|||.+..+
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~ 339 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKEN 339 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccc
Confidence 799999999999999999999999998653 2578876644
No 40
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=87.60 E-value=0.62 Score=52.65 Aligned_cols=36 Identities=25% Similarity=0.435 Sum_probs=31.0
Q ss_pred ecCcceeeeeEecccceeeEEEEEeeCce---eEEEeee
Q 012198 430 IRWSELLIKKKIGEGSFGTVYHAEWRNSV---SIFFFSI 465 (468)
Q Consensus 430 I~~~eL~l~e~IGsG~FGtVyrg~W~G~v---aVk~~~~ 465 (468)
+.-+++.+...||+|+||+|+.+..+++. |||++++
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK 403 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKK 403 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeec
Confidence 45589999999999999999999999985 6777653
No 41
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=86.67 E-value=0.58 Score=50.60 Aligned_cols=33 Identities=12% Similarity=0.025 Sum_probs=26.2
Q ss_pred ceeecCcceee---eeEecccceeeEEEEEeeCcee
Q 012198 427 GLEIRWSELLI---KKKIGEGSFGTVYHAEWRNSVS 459 (468)
Q Consensus 427 ~weI~~~eL~l---~e~IGsG~FGtVyrg~W~G~va 459 (468)
.|++..+.... .++||+|+||+||+|.|.+...
T Consensus 324 ~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~~ 359 (535)
T PRK09605 324 TWIKEEEVKRRKIPDHLIGKGAEADIKKGEYLGRDA 359 (535)
T ss_pred eeccccccccccCccceeccCCcEEEEEEeecCccc
Confidence 47666665554 7899999999999999987653
No 42
>PHA03209 serine/threonine kinase US3; Provisional
Probab=86.31 E-value=0.87 Score=45.90 Aligned_cols=30 Identities=23% Similarity=0.230 Sum_probs=24.6
Q ss_pred cceeeeeEecccceeeEEEEEeeCc---eeEEE
Q 012198 433 SELLIKKKIGEGSFGTVYHAEWRNS---VSIFF 462 (468)
Q Consensus 433 ~eL~l~e~IGsG~FGtVyrg~W~G~---vaVk~ 462 (468)
...++.++||+|+||+||+|.+.++ +|+|+
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~ 98 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKI 98 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEe
Confidence 3567789999999999999999875 45654
No 43
>PHA03207 serine/threonine kinase US3; Provisional
Probab=84.65 E-value=1.6 Score=44.67 Aligned_cols=33 Identities=18% Similarity=0.128 Sum_probs=25.6
Q ss_pred cCcceeeeeEecccceeeEEEEEeeCc-----eeEEEe
Q 012198 431 RWSELLIKKKIGEGSFGTVYHAEWRNS-----VSIFFF 463 (468)
Q Consensus 431 ~~~eL~l~e~IGsG~FGtVyrg~W~G~-----vaVk~~ 463 (468)
-..+.++.++||.|+||+||++.+++. ++||.+
T Consensus 90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~ 127 (392)
T PHA03207 90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAV 127 (392)
T ss_pred ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEec
Confidence 345678899999999999999988764 455554
No 44
>PHA03210 serine/threonine kinase US3; Provisional
Probab=84.23 E-value=0.74 Score=49.32 Aligned_cols=26 Identities=19% Similarity=0.492 Sum_probs=22.2
Q ss_pred cceeeeeEecccceeeEEEEEeeCce
Q 012198 433 SELLIKKKIGEGSFGTVYHAEWRNSV 458 (468)
Q Consensus 433 ~eL~l~e~IGsG~FGtVyrg~W~G~v 458 (468)
+..++.++||+|+||+||++.++..+
T Consensus 148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~ 173 (501)
T PHA03210 148 AHFRVIDDLPAGAFGKIFICALRAST 173 (501)
T ss_pred hccEEEeEecCCCCcceEEEEEeccc
Confidence 56788999999999999999887543
No 45
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=83.18 E-value=0.86 Score=44.68 Aligned_cols=32 Identities=38% Similarity=0.461 Sum_probs=24.3
Q ss_pred cceeeeeEecccceeeEEEEEeeCc---eeEEEee
Q 012198 433 SELLIKKKIGEGSFGTVYHAEWRNS---VSIFFFS 464 (468)
Q Consensus 433 ~eL~l~e~IGsG~FGtVyrg~W~G~---vaVk~~~ 464 (468)
+.+...++||+|+||+||+|++..+ ++||.+.
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~ 59 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMS 59 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEe
Confidence 3455677899999999999998643 5677654
No 46
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=83.11 E-value=0.46 Score=50.28 Aligned_cols=26 Identities=31% Similarity=0.529 Sum_probs=22.9
Q ss_pred cceeeeeEecccceeeEEEEEeeCce
Q 012198 433 SELLIKKKIGEGSFGTVYHAEWRNSV 458 (468)
Q Consensus 433 ~eL~l~e~IGsG~FGtVyrg~W~G~v 458 (468)
+|.+...+|++|+||.||||+=..+.
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~ 101 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTD 101 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcc
Confidence 57777899999999999999988764
No 47
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=82.74 E-value=0.75 Score=51.35 Aligned_cols=32 Identities=28% Similarity=0.612 Sum_probs=25.6
Q ss_pred ceeeeeEecccceeeEEEEEeeC---ceeEEEeee
Q 012198 434 ELLIKKKIGEGSFGTVYHAEWRN---SVSIFFFSI 465 (468)
Q Consensus 434 eL~l~e~IGsG~FGtVyrg~W~G---~vaVk~~~~ 465 (468)
++.-.|.||+|.||+||-|+-+. +||||++++
T Consensus 565 Qif~devLGSGQFG~VYgg~hRktGrdVAvKvIdK 599 (888)
T KOG4236|consen 565 QIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDK 599 (888)
T ss_pred HhhhHhhccCCcceeeecceecccCceeeeeeeec
Confidence 34445689999999999999874 378999875
No 48
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=81.11 E-value=1.6 Score=48.82 Aligned_cols=31 Identities=29% Similarity=0.417 Sum_probs=27.2
Q ss_pred ceeeeeEecccceeeEEEEEeeCc---eeEEEee
Q 012198 434 ELLIKKKIGEGSFGTVYHAEWRNS---VSIFFFS 464 (468)
Q Consensus 434 eL~l~e~IGsG~FGtVyrg~W~G~---vaVk~~~ 464 (468)
..++.+.||+|+||.|-|+.-+++ ||||+++
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiK 220 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIK 220 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeec
Confidence 667899999999999999988875 7899886
No 49
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=80.57 E-value=1.3 Score=48.87 Aligned_cols=35 Identities=23% Similarity=0.430 Sum_probs=28.8
Q ss_pred ecCcceeeeeEecccceeeEEEEEeeCce---eEEEee
Q 012198 430 IRWSELLIKKKIGEGSFGTVYHAEWRNSV---SIFFFS 464 (468)
Q Consensus 430 I~~~eL~l~e~IGsG~FGtVyrg~W~G~v---aVk~~~ 464 (468)
|.-+++++...||+|+||.||.++-+.+- |.|+++
T Consensus 138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~Lk 175 (550)
T KOG0605|consen 138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILK 175 (550)
T ss_pred CCcccchhheeeccccceeEEEEEEccCCcEEeeeccc
Confidence 44578889999999999999999999773 566654
No 50
>smart00090 RIO RIO-like kinase.
Probab=79.87 E-value=1.3 Score=43.16 Aligned_cols=29 Identities=24% Similarity=0.275 Sum_probs=22.7
Q ss_pred eeeeEecccceeeEEEEE---eeCc-eeEEEee
Q 012198 436 LIKKKIGEGSFGTVYHAE---WRNS-VSIFFFS 464 (468)
Q Consensus 436 ~l~e~IGsG~FGtVyrg~---W~G~-vaVk~~~ 464 (468)
.+.+.||+|+||.||+|. +.|. +|||++.
T Consensus 31 ~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~ 63 (237)
T smart00090 31 AIGGCISTGKEANVYHALDFDGSGKERAVKIYR 63 (237)
T ss_pred HhCCeeccCcceeEEEEEecCCCCcEEEEEEEE
Confidence 456889999999999997 4444 5788764
No 51
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=77.64 E-value=1.7 Score=47.20 Aligned_cols=33 Identities=24% Similarity=0.599 Sum_probs=26.9
Q ss_pred cceeecCcceeeeeEecccceeeEEEEEeeCce
Q 012198 426 EGLEIRWSELLIKKKIGEGSFGTVYHAEWRNSV 458 (468)
Q Consensus 426 ~~weI~~~eL~l~e~IGsG~FGtVyrg~W~G~v 458 (468)
.+..|-.+-+++.-.+-.|.||+||||.|+..+
T Consensus 277 ~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEd 309 (563)
T KOG1024|consen 277 QELTVQRCRVRLSCLLQEGTFGRIYRGIWREED 309 (563)
T ss_pred HhhhhhhhheechhhhhcCchhheeeeeecccC
Confidence 455666677888888999999999999998654
No 52
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=75.69 E-value=2 Score=49.04 Aligned_cols=30 Identities=17% Similarity=0.182 Sum_probs=22.7
Q ss_pred eeeeeEecccceeeEEEEEeeC---ceeEEEee
Q 012198 435 LLIKKKIGEGSFGTVYHAEWRN---SVSIFFFS 464 (468)
Q Consensus 435 L~l~e~IGsG~FGtVyrg~W~G---~vaVk~~~ 464 (468)
+...+.||+|+||+||+|.+.. .+|||.+.
T Consensus 692 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~ 724 (968)
T PLN00113 692 LKEENVISRGKKGASYKGKSIKNGMQFVVKEIN 724 (968)
T ss_pred CCcccEEccCCCeeEEEEEECCCCcEEEEEEcc
Confidence 3445689999999999999753 35777664
No 53
>PHA03211 serine/threonine kinase US3; Provisional
Probab=75.22 E-value=3.1 Score=44.59 Aligned_cols=29 Identities=21% Similarity=0.321 Sum_probs=23.7
Q ss_pred ceeeeeEecccceeeEEEEEeeCc---eeEEE
Q 012198 434 ELLIKKKIGEGSFGTVYHAEWRNS---VSIFF 462 (468)
Q Consensus 434 eL~l~e~IGsG~FGtVyrg~W~G~---vaVk~ 462 (468)
...+.++||+|+||+||++.+... ++||.
T Consensus 170 gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~ 201 (461)
T PHA03211 170 GFAIHRALTPGSEGCVFESSHPDYPQRVVVKA 201 (461)
T ss_pred CeEEEEEEccCCCeEEEEEEECCCCCEEEEec
Confidence 466788999999999999999754 56664
No 54
>PF00797 Acetyltransf_2: N-acetyltransferase; InterPro: IPR001447 Arylamine N-acetyltransferase (NAT) is a cytosolic enzyme of approximately 30 kDa. It facilitates the transfer of an acetyl group from acetyl coenzyme A on to a wide range of arylamine, N-hydroxyarylamines and hydrazines. Acetylation of these compounds generally results in inactivation. NAT is found in many species from Mycobacteria (Mycobacterium tuberculosis, Mycobacterium smegmatis etc) to Homo sapiens (Human). It was the first enzyme to be observed to have polymorphic activity amongst human individuals. NAT is responsible for the inactivation of Isoniazid (a drug used to treat tuberculosis) in humans. The NAT protein has also been shown to be involved in the breakdown of folic acid. NAT catalyses the reaction: Acetyl-coA + arylamine = coA + N-acetylarylamine NAT is the target of a common genetic polymorphism of clinical relevance in humans. The N-acetylation polymorphism is determined by low or high NAT activity in liver. NAT has been implicated in the action and toxicity of amine-containing drugs, and in the susceptibility to cancer and systematic lupus erythematosus. Two highly similar human genes for NAT, termed NAT1 and NAT2, encode genetically invariant and variant NAT proteins, respectively. ; GO: 0016407 acetyltransferase activity, 0008152 metabolic process; PDB: 1W6F_A 1W5R_A 1GX3_D 2PQT_A 2IJA_A 1W4T_A 2BSZ_B 3D9W_B 3LTW_A 3LNB_A ....
Probab=74.51 E-value=4.8 Score=38.74 Aligned_cols=54 Identities=20% Similarity=0.257 Sum_probs=39.0
Q ss_pred ccchhhhHHHHHHHhhhcCCCceEeccccccCCCCC-------cceEEEeCCCeeEEEeCCC
Q 012198 207 VGLCVHRALLFKVLADLINLPCRIAKGCKYCRRDDA-------SSCLVQIGPDREYLVDLLE 261 (468)
Q Consensus 207 ~GlcRHRALLFKvLAD~IGLPCrLVRG~~Y~~~dd~-------a~~lVk~~~~reYIVDLM~ 261 (468)
=|.|.+--.||..|=..+|..++++.|.-+...+.. ...+|.+ +++.|+||.=.
T Consensus 46 GG~C~elN~lf~~lL~~lGf~v~~~~arv~~~~~~~~~~~~~H~~liV~~-~~~~ylvDvGf 106 (240)
T PF00797_consen 46 GGYCFELNGLFYWLLRELGFDVTLVSARVYSPGGPDYWPPRTHLVLIVTL-DGERYLVDVGF 106 (240)
T ss_dssp -B-HHHHHHHHHHHHHHCT-EEEEEEEEEETTTTTCCSSSEEEEEEEEEE-TTEEEEE-SSS
T ss_pred CeEhHHHHHHHHHHHHHCCCeEEEEEEEEEeCCCCCCCCCCceEEEEEEE-CCEEEEEeccC
Confidence 499999999999999999999999998766544331 2244665 67799999854
No 55
>PF04473 DUF553: Transglutaminase-like domain; InterPro: IPR007562 This entry represents a transglutaminase-like domain found in a family of uncharacterised archaeal proteins that had previously been called DUF553 and UPF0252.
Probab=73.69 E-value=7.4 Score=36.56 Aligned_cols=55 Identities=16% Similarity=0.199 Sum_probs=43.4
Q ss_pred ccccchhhhHHHHHHHhhhcCCCceEeccccccCCCCCcceEEEeCCCeeEEEeCC
Q 012198 205 LSVGLCVHRALLFKVLADLINLPCRIAKGCKYCRRDDASSCLVQIGPDREYLVDLL 260 (468)
Q Consensus 205 Lk~GlcRHRALLFKvLAD~IGLPCrLVRG~~Y~~~dd~a~~lVk~~~~reYIVDLM 260 (468)
.+.|+|+--|+|...|-=..|+.-.-|-+..+.+..+.+++.|++ ++..|++|--
T Consensus 73 ~k~GiC~DYA~Lta~lLl~~g~~~~yi~~~~~~~~~~Haa~aV~i-ng~~yvlDq~ 127 (153)
T PF04473_consen 73 YKKGICGDYAILTAALLLNMGYSPVYILHIEFDNDPGHAAVAVKI-NGKYYVLDQH 127 (153)
T ss_pred cCCeeeHHHHHHHHHHHHHCCCCceEEEEEecCCCCCeEEEEEEE-CCEEEEEeCC
Confidence 468999999999999999999776445566665544567788898 6789999953
No 56
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=71.81 E-value=2.2 Score=47.13 Aligned_cols=32 Identities=19% Similarity=0.330 Sum_probs=25.6
Q ss_pred CcceeeeeEecccceeeEEEEEeeC---ceeEEEee
Q 012198 432 WSELLIKKKIGEGSFGTVYHAEWRN---SVSIFFFS 464 (468)
Q Consensus 432 ~~eL~l~e~IGsG~FGtVyrg~W~G---~vaVk~~~ 464 (468)
++++.. +.||+||+|.||+|..+. .+|||+..
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~r 153 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLR 153 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeC
Confidence 444555 699999999999999974 36899875
No 57
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=71.56 E-value=3.5 Score=43.60 Aligned_cols=32 Identities=22% Similarity=0.467 Sum_probs=26.1
Q ss_pred ceeeeeEecccceeeEEEEEeeCc---eeEEEeee
Q 012198 434 ELLIKKKIGEGSFGTVYHAEWRNS---VSIFFFSI 465 (468)
Q Consensus 434 eL~l~e~IGsG~FGtVyrg~W~G~---vaVk~~~~ 465 (468)
-.+++++||.|.||+||++.=..+ .|+|++.+
T Consensus 36 ~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k 70 (382)
T KOG0032|consen 36 KYELGRELGRGQFGVVYLCREKSTGKEVACKVIPK 70 (382)
T ss_pred cEEehhhhCCCCceEEEEEEecCCCceeEEEEeeh
Confidence 345569999999999999998763 68998865
No 58
>PF13369 Transglut_core2: Transglutaminase-like superfamily
Probab=70.48 E-value=26 Score=32.06 Aligned_cols=105 Identities=22% Similarity=0.328 Sum_probs=65.0
Q ss_pred cHHHHHHHHHHHHccccCHHHHHHHHHHHHHhhcCCCCCCchhhhhHHHHHHHHHHHhhhCCeEEEeccccccchhhhHH
Q 012198 136 NLKELHNRVLSLLCDRITAEEAVHQLANLVCNHMGGTTSTEEEEFDKQWSECAEHLKDCLNSVVLPIGSLSVGLCVHRAL 215 (468)
Q Consensus 136 ~L~~L~~~a~~l~~~l~~~~~~v~~LA~lVad~MGG~v~~~~~~l~~~w~~~~~eLK~~l~S~ViPIG~Lk~GlcRHRAL 215 (468)
.|.++...++..+....+..+.++.|..+.-+.+| +..+..++...-... |-.-+. =+.|+|-=-|+
T Consensus 6 ~Ld~la~~v~~~~~~~~~~~~~l~al~~~l~~~~g--F~~~~~~y~~~~n~~---l~~vL~--------~r~G~Pi~L~i 72 (152)
T PF13369_consen 6 RLDALAAQVRQRLPARASPREKLEALNDVLYQELG--FSGNSENYYDPENSF---LHKVLE--------RRRGIPISLAI 72 (152)
T ss_pred HHHHHHHHHHHHccccCCHHHHHHHHHHHHHHHcC--CCCCccccCChHhhh---HHHHHh--------cCCCCcHHHHH
Confidence 45666666666665556788899999999988888 321111111110111 111222 15677778899
Q ss_pred HHHHHhhhcCCCceEeccccccCCCCCcceEEEeCCCeeEEEeCCC
Q 012198 216 LFKVLADLINLPCRIAKGCKYCRRDDASSCLVQIGPDREYLVDLLE 261 (468)
Q Consensus 216 LFKvLAD~IGLPCrLVRG~~Y~~~dd~a~~lVk~~~~reYIVDLM~ 261 (468)
||..+|-++||+|..|-= +. .-++++..+.+++||...
T Consensus 73 ly~~va~rlGl~~~~v~~-Pg-------h~l~r~~~~~~~~iDpf~ 110 (152)
T PF13369_consen 73 LYLEVARRLGLPAEPVNF-PG-------HFLVRVRSDGEFYIDPFN 110 (152)
T ss_pred HHHHHHHHcCCeEEEEec-CC-------EEEEEEecCCcEEEccCC
Confidence 999999999999998862 11 134444324468899765
No 59
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=70.28 E-value=6.5 Score=43.18 Aligned_cols=40 Identities=20% Similarity=0.331 Sum_probs=34.7
Q ss_pred cceeecCcceeeeeEecccceeeEEEEEeeCc---eeEEEeee
Q 012198 426 EGLEIRWSELLIKKKIGEGSFGTVYHAEWRNS---VSIFFFSI 465 (468)
Q Consensus 426 ~~weI~~~eL~l~e~IGsG~FGtVyrg~W~G~---vaVk~~~~ 465 (468)
..|-+..++-+|.+.||.|.-++||+|...-. ||||++++
T Consensus 19 ~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inL 61 (516)
T KOG0582|consen 19 KEFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINL 61 (516)
T ss_pred ccCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeeh
Confidence 47889999999999999999999999998743 57888874
No 60
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=69.04 E-value=4.1 Score=43.16 Aligned_cols=29 Identities=31% Similarity=0.541 Sum_probs=24.7
Q ss_pred ecCcceeeeeEecccceeeEEEEEeeCce
Q 012198 430 IRWSELLIKKKIGEGSFGTVYHAEWRNSV 458 (468)
Q Consensus 430 I~~~eL~l~e~IGsG~FGtVyrg~W~G~v 458 (468)
+..+++++.+.||+|+||+||.-+-+.+-
T Consensus 22 ~~~~dF~~lkviGkG~fGkV~~Vrk~dt~ 50 (357)
T KOG0598|consen 22 VGPDDFEILKVIGKGSFGKVFQVRKKDTG 50 (357)
T ss_pred CChhheeeeeeeeccCCceEEEEEEcccC
Confidence 45689999999999999999998877553
No 61
>PHA03212 serine/threonine kinase US3; Provisional
Probab=68.79 E-value=6.4 Score=40.77 Aligned_cols=34 Identities=18% Similarity=0.055 Sum_probs=25.9
Q ss_pred ecCcceeeeeEecccceeeEEEEEeeC---ceeEEEe
Q 012198 430 IRWSELLIKKKIGEGSFGTVYHAEWRN---SVSIFFF 463 (468)
Q Consensus 430 I~~~eL~l~e~IGsG~FGtVyrg~W~G---~vaVk~~ 463 (468)
|.....++.++||+|+||+||++.-.. .+|||..
T Consensus 89 ~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~ 125 (391)
T PHA03212 89 IEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAG 125 (391)
T ss_pred cccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEech
Confidence 444567889999999999999997653 3566653
No 62
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=68.56 E-value=3.3 Score=44.24 Aligned_cols=25 Identities=20% Similarity=0.254 Sum_probs=21.2
Q ss_pred eEecccceeeEEEEEee-Cc-eeEEEe
Q 012198 439 KKIGEGSFGTVYHAEWR-NS-VSIFFF 463 (468)
Q Consensus 439 e~IGsG~FGtVyrg~W~-G~-vaVk~~ 463 (468)
+.||+||+|.||+|+.+ |. ||||+.
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~ 149 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVL 149 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEee
Confidence 58999999999999996 43 678875
No 63
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=68.16 E-value=2 Score=47.83 Aligned_cols=34 Identities=26% Similarity=0.346 Sum_probs=28.5
Q ss_pred cCcceeeeeEecccceeeEEEEEeeCc---eeEEEee
Q 012198 431 RWSELLIKKKIGEGSFGTVYHAEWRNS---VSIFFFS 464 (468)
Q Consensus 431 ~~~eL~l~e~IGsG~FGtVyrg~W~G~---vaVk~~~ 464 (468)
...|+.+++.||.|+|.+|++|+=..+ .|||+++
T Consensus 71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~ 107 (604)
T KOG0592|consen 71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLD 107 (604)
T ss_pred ChhhcchhheeccccceeEEEeeecCCCceeeHhhhh
Confidence 347899999999999999999998765 4677764
No 64
>PF03109 ABC1: ABC1 family; InterPro: IPR004147 This entry includes ABC1 from yeast [] and AarF from Escherichia coli []. These proteins have a nuclear or mitochondrial subcellular location in eukaryotes. The exact molecular functions of these proteins is not clear, however yeast ABC1 suppresses a cytochrome b mRNA translation defect and is essential for the electron transfer in the bc 1 complex [] and E. coli AarF is required for ubiquinone production []. It has been suggested that members of the ABC1 family are novel chaperonins []. These proteins are unrelated to the ABC transporter proteins.
Probab=68.13 E-value=1.5 Score=38.71 Aligned_cols=27 Identities=15% Similarity=0.206 Sum_probs=21.9
Q ss_pred eeEecccceeeEEEEEee-C-ceeEEEee
Q 012198 438 KKKIGEGSFGTVYHAEWR-N-SVSIFFFS 464 (468)
Q Consensus 438 ~e~IGsG~FGtVyrg~W~-G-~vaVk~~~ 464 (468)
-+.||+||.|.||+|+++ | .+|||+..
T Consensus 16 ~~PlasASiaQVh~a~l~~g~~VaVKV~r 44 (119)
T PF03109_consen 16 PEPLASASIAQVHRARLKDGEEVAVKVQR 44 (119)
T ss_pred cchhhheehhhheeeeecccchhhhhhcc
Confidence 358999999999999997 3 46788753
No 65
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=68.04 E-value=3.1 Score=45.52 Aligned_cols=37 Identities=27% Similarity=0.416 Sum_probs=32.5
Q ss_pred eecCcceeeeeEecccceeeEEEEEeeCce---eEEEeee
Q 012198 429 EIRWSELLIKKKIGEGSFGTVYHAEWRNSV---SIFFFSI 465 (468)
Q Consensus 429 eI~~~eL~l~e~IGsG~FGtVyrg~W~G~v---aVk~~~~ 465 (468)
.|.-.++.+...||.|+||.|-.|.-+|++ |||++..
T Consensus 345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkK 384 (683)
T KOG0696|consen 345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKK 384 (683)
T ss_pred ceeecccceEEEeccCccceeeeecccCcchhhhhhhhcc
Confidence 577889999999999999999999999996 6777653
No 66
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=63.86 E-value=8 Score=41.09 Aligned_cols=30 Identities=13% Similarity=0.209 Sum_probs=23.2
Q ss_pred ceeeeeEecccceeeEEEEEeeCc----eeEEEe
Q 012198 434 ELLIKKKIGEGSFGTVYHAEWRNS----VSIFFF 463 (468)
Q Consensus 434 eL~l~e~IGsG~FGtVyrg~W~G~----vaVk~~ 463 (468)
...+.+.||+|+||+||+|....+ +++|++
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~ 101 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFV 101 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEc
Confidence 367789999999999999987544 455543
No 67
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=63.82 E-value=8 Score=42.15 Aligned_cols=32 Identities=31% Similarity=0.448 Sum_probs=25.7
Q ss_pred ceeeeeEecccceeeEEEEEeeCc---eeEEEeee
Q 012198 434 ELLIKKKIGEGSFGTVYHAEWRNS---VSIFFFSI 465 (468)
Q Consensus 434 eL~l~e~IGsG~FGtVyrg~W~G~---vaVk~~~~ 465 (468)
.-.+.+.+|+|+||+|-.|.=+.+ +|||+++.
T Consensus 173 ~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~k 207 (475)
T KOG0615|consen 173 YYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINK 207 (475)
T ss_pred eeEeeeeecCCceeEEEEEEEcccCcEEEeeeeeh
Confidence 345678999999999999877643 79999874
No 68
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=58.67 E-value=5.9 Score=42.40 Aligned_cols=29 Identities=45% Similarity=0.812 Sum_probs=23.0
Q ss_pred ceeeeeEecccceeeEEEEE--eeC-ceeEEE
Q 012198 434 ELLIKKKIGEGSFGTVYHAE--WRN-SVSIFF 462 (468)
Q Consensus 434 eL~l~e~IGsG~FGtVyrg~--W~G-~vaVk~ 462 (468)
-..+|++||.|+||+.+.|+ +++ .||||+
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKf 60 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKF 60 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEe
Confidence 35679999999999999997 343 467875
No 69
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=58.46 E-value=1.9 Score=44.96 Aligned_cols=33 Identities=21% Similarity=0.395 Sum_probs=29.9
Q ss_pred eecCcceeeeeEecccceeeEEEEEeeCceeEE
Q 012198 429 EIRWSELLIKKKIGEGSFGTVYHAEWRNSVSIF 461 (468)
Q Consensus 429 eI~~~eL~l~e~IGsG~FGtVyrg~W~G~vaVk 461 (468)
.|+.++|.|.-+|..-..|+.|||+|+|.+.|+
T Consensus 186 gid~~~lnl~tkl~e~hsgelwrgrwqgndiva 218 (448)
T KOG0195|consen 186 GIDVSSLNLITKLAESHSGELWRGRWQGNDIVA 218 (448)
T ss_pred CcchhhhhhhhhhccCCCcccccccccCcchhh
Confidence 488899999999999999999999999988654
No 70
>PF02809 UIM: Ubiquitin interaction motif; InterPro: IPR003903 The Ubiquitin Interacting Motif (UIM), or 'LALAL-motif', is a stretch of about 20 amino acid residues, which was first described in the 26S proteasome subunit PSD4/RPN-10 that is known to recognise ubiquitin [,]. In addition, the UIM is found, often in tandem or triplet arrays, in a variety of proteins either involved in ubiquitination and ubiquitin metabolism, or known to interact with ubiquitin-like modifiers. Among the UIM proteins are two different subgroups of the UBP (ubiquitin carboxy-terminal hydrolase) family of deubiquitinating enzymes, one F-box protein, one family of HECT-containing ubiquitin-ligases (E3s) from plants, and several proteins containing ubiquitin-associated UBA and/or UBX domains []. In most of these proteins, the UIM occurs in multiple copies and in association with other domains such as UBA (IPR015940 from INTERPRO), UBX (IPR001012 from INTERPRO), ENTH, EH (IPR000261 from INTERPRO), VHS (IPR002014 from INTERPRO), SH3 (IPR001452 from INTERPRO), HECT (IPR000569 from INTERPRO), VWFA (IPR002035 from INTERPRO), EF-hand calcium-binding, WD-40 (IPR001680 from INTERPRO), F-box (IPR001810 from INTERPRO), LIM (IPR001781 from INTERPRO), protein kinase (IPR000719 from INTERPRO), ankyrin (IPR002110 from INTERPRO), PX (IPR001683 from INTERPRO), phosphatidylinositol 3- and 4-kinase (IPR000403 from INTERPRO), C2 (IPR000008 from INTERPRO), OTU (IPR003323 from INTERPRO), dnaJ (IPR001623 from INTERPRO), RING-finger (IPR001841 from INTERPRO) or FYVE-finger (IPR017455 from INTERPRO). UIMs have been shown to bind ubiquitin and to serve as a specific targeting signal important for monoubiquitination. Thus, UIMs may have several functions in ubiquitin metabolism each of which may require different numbers of UIMs [, , ]. The UIM is unlikely to form an independent folding domain. Instead, based on the spacing of the conserved residues, the motif probably forms a short alpha-helix that can be embedded into different protein folds []. Some proteins known to contain an UIM are listed below: Eukaryotic PSD4/RPN-10/S5, a multi-ubiquitin binding subunit of the 26S proteasome. Vertebrate Machado-Joseph disease protein 1 (Ataxin-3), which acts as a histone-binding protein that regulates transcription; defects in Ataxin-3 cause the neurodegenerative disorder Machado-Joseph disease (MJD). Vertebrate epsin and epsin2. Vertebrate hepatocyte growth factor-regulated tyrosine kinase substrate (HRS). Mammalian epidermal growth factor receptor substrate 15 (EPS15), which is involved in cell growth regulation. Mammalian epidermal growth factor receptor substrate EPS15R. Drosophila melanogaster (Fruit fly) liquid facets (lqf), an epsin. Yeast VPS27 vacuolar sorting protein, which is required for membrane traffic to the vacuole. ; PDB: 2KDE_A 2KDF_A 1YX6_A 1YX5_A 1YX4_A 1P9C_A 1UEL_B 1P9D_S 2KLZ_A.
Probab=55.38 E-value=11 Score=23.62 Aligned_cols=15 Identities=33% Similarity=0.479 Sum_probs=12.2
Q ss_pred hhHHHHHHHHHHhhc
Q 012198 23 EESYQLQLAMALRLS 37 (468)
Q Consensus 23 eE~yqlQLaLalr~s 37 (468)
+|+-+||+||++++.
T Consensus 2 ~Ed~~L~~Al~~S~~ 16 (18)
T PF02809_consen 2 DEDEDLQRALEMSLE 16 (18)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHhhhc
Confidence 578899999998653
No 71
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=53.67 E-value=3.6 Score=49.61 Aligned_cols=34 Identities=24% Similarity=0.382 Sum_probs=25.2
Q ss_pred eeecCcceeeeeEecccceeeEEEEEee--Cc-eeEEEee
Q 012198 428 LEIRWSELLIKKKIGEGSFGTVYHAEWR--NS-VSIFFFS 464 (468)
Q Consensus 428 weI~~~eL~l~e~IGsG~FGtVyrg~W~--G~-vaVk~~~ 464 (468)
+..+|+|| +.||+|+||.||+.+=+ |. .|||.|.
T Consensus 477 Y~~DFEEL---~lLGkGGFG~VvkVRNKlDGr~YAIKKIp 513 (1351)
T KOG1035|consen 477 YLNDFEEL---ELLGKGGFGSVVKVRNKLDGREYAIKKIP 513 (1351)
T ss_pred HhhhhHHH---HHhcCCCCceEEEEeecccchhhhhhhcc
Confidence 45566666 56899999999998765 33 4888764
No 72
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=51.64 E-value=5.2 Score=44.36 Aligned_cols=35 Identities=31% Similarity=0.408 Sum_probs=27.3
Q ss_pred eecCcceeeeeEecccceeeEEEEEeeCc---eeEEEe
Q 012198 429 EIRWSELLIKKKIGEGSFGTVYHAEWRNS---VSIFFF 463 (468)
Q Consensus 429 eI~~~eL~l~e~IGsG~FGtVyrg~W~G~---vaVk~~ 463 (468)
.-.-+..+..++||+|.||.||+|+-.-+ ||.|.+
T Consensus 113 ~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKv 150 (560)
T KOG0600|consen 113 PRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKV 150 (560)
T ss_pred ccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEe
Confidence 35566788889999999999999987755 455544
No 73
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=50.10 E-value=11 Score=41.75 Aligned_cols=36 Identities=22% Similarity=0.286 Sum_probs=28.5
Q ss_pred ecCcceeeeeEecccceeeEEEEEeeCc---eeEEEeee
Q 012198 430 IRWSELLIKKKIGEGSFGTVYHAEWRNS---VSIFFFSI 465 (468)
Q Consensus 430 I~~~eL~l~e~IGsG~FGtVyrg~W~G~---vaVk~~~~ 465 (468)
+--.+.++++.||+|.||.|-.|.=-.+ +|||++..
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K 132 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPK 132 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeech
Confidence 3346778899999999999999987655 57888764
No 74
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=49.79 E-value=9.7 Score=40.08 Aligned_cols=33 Identities=24% Similarity=0.356 Sum_probs=25.4
Q ss_pred CcceeeeeEecccceeeEEEEEeeCc---eeEEEee
Q 012198 432 WSELLIKKKIGEGSFGTVYHAEWRNS---VSIFFFS 464 (468)
Q Consensus 432 ~~eL~l~e~IGsG~FGtVyrg~W~G~---vaVk~~~ 464 (468)
-++++..+-||.|+||+|+.-+-+-+ .|.|+++
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~ 78 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLD 78 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcC
Confidence 36788899999999999998776644 2566654
No 75
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=49.69 E-value=18 Score=43.11 Aligned_cols=37 Identities=38% Similarity=0.615 Sum_probs=30.4
Q ss_pred cceeecCcceeeeeEecccceeeEEEEEeeCc--eeEEE
Q 012198 426 EGLEIRWSELLIKKKIGEGSFGTVYHAEWRNS--VSIFF 462 (468)
Q Consensus 426 ~~weI~~~eL~l~e~IGsG~FGtVyrg~W~G~--vaVk~ 462 (468)
.+.+..-+.+.+...||.|+||+||+|.=... +|+|+
T Consensus 691 ~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~ 729 (974)
T KOG1166|consen 691 TEFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKV 729 (974)
T ss_pred ceeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEe
Confidence 47788889999999999999999999987643 34553
No 76
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=43.82 E-value=33 Score=33.91 Aligned_cols=34 Identities=21% Similarity=0.508 Sum_probs=30.0
Q ss_pred cceeeeeEecccce-eeEEEEEeeCce-eEEEeeee
Q 012198 433 SELLIKKKIGEGSF-GTVYHAEWRNSV-SIFFFSIY 466 (468)
Q Consensus 433 ~eL~l~e~IGsG~F-GtVyrg~W~G~v-aVk~~~~~ 466 (468)
.++++.|.||.|+- |.||+.+-.|.. |+|++..|
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I~g~~YALKlf~~~ 72 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEIDGRIYALKLFRFW 72 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEECCeEEEEEEeecc
Confidence 78999999999999 999999999885 89985543
No 77
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=43.55 E-value=15 Score=42.12 Aligned_cols=25 Identities=44% Similarity=0.658 Sum_probs=18.9
Q ss_pred eEecccceeeEEEEEeeCc---eeEEEe
Q 012198 439 KKIGEGSFGTVYHAEWRNS---VSIFFF 463 (468)
Q Consensus 439 e~IGsG~FGtVyrg~W~G~---vaVk~~ 463 (468)
+.||-|+||.||-|.-..+ ||||..
T Consensus 32 rEIGHGSFGAVYfArd~~n~evVAIKKM 59 (948)
T KOG0577|consen 32 REIGHGSFGAVYFARDVRNSEVVAIKKM 59 (948)
T ss_pred HHhcCCccceeEEeeccCccceeeeeec
Confidence 5899999999999976543 455544
No 78
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=43.53 E-value=21 Score=36.27 Aligned_cols=39 Identities=15% Similarity=0.342 Sum_probs=32.2
Q ss_pred cceeecCcceeeeeEecccceeeE--EEEEeeCce-eEEEee
Q 012198 426 EGLEIRWSELLIKKKIGEGSFGTV--YHAEWRNSV-SIFFFS 464 (468)
Q Consensus 426 ~~weI~~~eL~l~e~IGsG~FGtV--yrg~W~G~v-aVk~~~ 464 (468)
..+||+-++|+-+++||+|++|.| ||-.+.|.. |||-+.
T Consensus 39 ~~~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~ 80 (282)
T KOG0984|consen 39 RNFEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIR 80 (282)
T ss_pred CccccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeeh
Confidence 458899999999999999999975 777788886 677553
No 79
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=41.33 E-value=38 Score=39.27 Aligned_cols=42 Identities=19% Similarity=0.350 Sum_probs=35.0
Q ss_pred cceeecCcceeeeeEecccceeeEEEEEeeCc-eeEEEeeeec
Q 012198 426 EGLEIRWSELLIKKKIGEGSFGTVYHAEWRNS-VSIFFFSIYI 467 (468)
Q Consensus 426 ~~weI~~~eL~l~e~IGsG~FGtVyrg~W~G~-vaVk~~~~~~ 467 (468)
.-.+|.-..+++.+-|.+|||+.||.+.-.+. ..+++..+|+
T Consensus 30 ~~~~Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~ 72 (738)
T KOG1989|consen 30 QTFTVGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYV 72 (738)
T ss_pred eEEEECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeec
Confidence 34788999999999999999999999999877 5566656664
No 80
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=40.20 E-value=20 Score=38.29 Aligned_cols=37 Identities=24% Similarity=0.293 Sum_probs=30.4
Q ss_pred ceeecCcceeeeeEecccceeeEEEEEeeCce---eEEEe
Q 012198 427 GLEIRWSELLIKKKIGEGSFGTVYHAEWRNSV---SIFFF 463 (468)
Q Consensus 427 ~weI~~~eL~l~e~IGsG~FGtVyrg~W~G~v---aVk~~ 463 (468)
+-.|..+||+-...||+|+.|+||+..-+.+- |.|.+
T Consensus 73 ~~~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I 112 (364)
T KOG0581|consen 73 DNGISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVI 112 (364)
T ss_pred ccccCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEee
Confidence 34578889999999999999999999887553 56665
No 81
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=40.15 E-value=6.3 Score=41.13 Aligned_cols=38 Identities=24% Similarity=0.237 Sum_probs=29.9
Q ss_pred ceeecCcceeeeeEecccceeeEEEEEeeCc---eeEEEee
Q 012198 427 GLEIRWSELLIKKKIGEGSFGTVYHAEWRNS---VSIFFFS 464 (468)
Q Consensus 427 ~weI~~~eL~l~e~IGsG~FGtVyrg~W~G~---vaVk~~~ 464 (468)
-|+...+.|+=...||.|+||+|++=..+-+ -|||.+.
T Consensus 58 ~~~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr 98 (361)
T KOG1006|consen 58 LHTFTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIR 98 (361)
T ss_pred ccccccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEee
Confidence 4677778888888999999999999777644 3677664
No 82
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=36.48 E-value=48 Score=33.08 Aligned_cols=35 Identities=9% Similarity=-0.125 Sum_probs=28.0
Q ss_pred ecCcceeeeeEecccceeeEEEEEeeC-ceeEEEee
Q 012198 430 IRWSELLIKKKIGEGSFGTVYHAEWRN-SVSIFFFS 464 (468)
Q Consensus 430 I~~~eL~l~e~IGsG~FGtVyrg~W~G-~vaVk~~~ 464 (468)
|=-......+.||.|+||.||...-.+ .++||++.
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~ 63 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFA 63 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEecCCCcEEEEEec
Confidence 335678889999999999999987754 46788774
No 83
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=35.79 E-value=33 Score=39.27 Aligned_cols=38 Identities=29% Similarity=0.451 Sum_probs=29.0
Q ss_pred ceeec---CcceeeeeEecccceeeEEEEEeeCc---eeEEEee
Q 012198 427 GLEIR---WSELLIKKKIGEGSFGTVYHAEWRNS---VSIFFFS 464 (468)
Q Consensus 427 ~weI~---~~eL~l~e~IGsG~FGtVyrg~W~G~---vaVk~~~ 464 (468)
+||.- +++....+++|+|.||.|+.+.++.. |+||++.
T Consensus 552 ~~e~~~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~ 595 (772)
T KOG1152|consen 552 GCEKEYKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIF 595 (772)
T ss_pred cceeeecccccceeeeeccccccceEEEeeecccceEEEeeehh
Confidence 56643 34568899999999999999998765 5666654
No 84
>PRK10941 hypothetical protein; Provisional
Probab=34.75 E-value=1.2e+02 Score=30.96 Aligned_cols=108 Identities=15% Similarity=0.225 Sum_probs=66.1
Q ss_pred cHHHHHHHHHHHHccccCHHHHHHHHHHHHHhhcCCCCCCchhhhh---HHHHHHHHHHHhhhCCeEEEeccccccchhh
Q 012198 136 NLKELHNRVLSLLCDRITAEEAVHQLANLVCNHMGGTTSTEEEEFD---KQWSECAEHLKDCLNSVVLPIGSLSVGLCVH 212 (468)
Q Consensus 136 ~L~~L~~~a~~l~~~l~~~~~~v~~LA~lVad~MGG~v~~~~~~l~---~~w~~~~~eLK~~l~S~ViPIG~Lk~GlcRH 212 (468)
+|..|...|+..+....+..+++++|.++.-...| +..+..+.. +.|-. .-|... .|+--=
T Consensus 37 ~L~~l~~~~~~~l~~~~~~~~~l~~L~~~fy~~lg--F~Gn~~~Y~~p~ns~L~--~VL~~R------------~G~Pis 100 (269)
T PRK10941 37 ELERLVSLAREEISQLLPQDEQLEKLIALFYGEWG--FGGASGVYRLSDALWLD--KVLKTR------------QGSAVS 100 (269)
T ss_pred HHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHhC--CCCCccccCCchhhHHH--HHHHcc------------CCCcHH
Confidence 46666666666666656788899999999888887 322222111 22221 112222 333333
Q ss_pred hHHHHHHHhhhcCCCceEeccccccCCCCCcceEEEe--CCCeeEEEeCCCCCCcccCC
Q 012198 213 RALLFKVLADLINLPCRIAKGCKYCRRDDASSCLVQI--GPDREYLVDLLEDPGVLSKP 269 (468)
Q Consensus 213 RALLFKvLAD~IGLPCrLVRG~~Y~~~dd~a~~lVk~--~~~reYIVDLM~~PG~Li~~ 269 (468)
=|+||-.+|-++|+|..-|== + ..-++|. .++..|+||... |.....
T Consensus 101 L~il~l~iA~~lglp~~gV~f-P-------ghfllr~~~~d~~~~~IDPf~--G~~L~~ 149 (269)
T PRK10941 101 LGAILLWIANRLDLPLMPVIF-P-------TQLILRADWLDGEMWLINPFN--GETLDE 149 (269)
T ss_pred HHHHHHHHHHHcCCCeeeeec-C-------chheeeeecCCCceEEEeCCC--CCCCCH
Confidence 489999999999999876631 1 1245665 344568999955 885443
No 85
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=30.31 E-value=64 Score=34.97 Aligned_cols=37 Identities=16% Similarity=0.316 Sum_probs=31.2
Q ss_pred cceeecCcceeeeeEecccceeeEEEEEeeCceeEEE
Q 012198 426 EGLEIRWSELLIKKKIGEGSFGTVYHAEWRNSVSIFF 462 (468)
Q Consensus 426 ~~weI~~~eL~l~e~IGsG~FGtVyrg~W~G~vaVk~ 462 (468)
..|.+...++.|...||+|+|..|-..+...++.|.-
T Consensus 243 ~~~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiya 279 (593)
T KOG0695|consen 243 ISQGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYA 279 (593)
T ss_pred cccccccccceeeeeecCcchhhhhheehcccceeee
Confidence 3577888999999999999999999998887765543
No 86
>PF13471 Transglut_core3: Transglutaminase-like superfamily
Probab=29.40 E-value=86 Score=27.21 Aligned_cols=42 Identities=24% Similarity=0.344 Sum_probs=34.6
Q ss_pred chhhhHHHHHHHhhhcCCCceEeccccccCCCCCcceEEEeC
Q 012198 209 LCVHRALLFKVLADLINLPCRIAKGCKYCRRDDASSCLVQIG 250 (468)
Q Consensus 209 lcRHRALLFKvLAD~IGLPCrLVRG~~Y~~~dd~a~~lVk~~ 250 (468)
-|-+|||..+.+.=+-|+++.|+=|....+..-.+.+.|..+
T Consensus 57 ~CL~~ala~~~~L~~~gi~~~l~iGv~~~~~~~~aHAWve~~ 98 (117)
T PF13471_consen 57 KCLPRALALQRLLRRRGIPATLVIGVRKDDDPFAAHAWVECG 98 (117)
T ss_pred ChHHHHHHHHHHHHhcCCCcEEEEEEeeCCCCceEEEEEEEC
Confidence 899999999999999999999999976543344566777764
No 87
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=28.56 E-value=18 Score=43.89 Aligned_cols=39 Identities=23% Similarity=0.399 Sum_probs=29.8
Q ss_pred ceeecCcceeeeeEecccceeeEEEEEeeCcee---EEEeee
Q 012198 427 GLEIRWSELLIKKKIGEGSFGTVYHAEWRNSVS---IFFFSI 465 (468)
Q Consensus 427 ~weI~~~eL~l~e~IGsG~FGtVyrg~W~G~va---Vk~~~~ 465 (468)
+.....+++++...||+|.||+|+.=+-+++.. .|++|.
T Consensus 69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK 110 (1317)
T KOG0612|consen 69 ELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNK 110 (1317)
T ss_pred HHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhH
Confidence 445666888889999999999999988877654 444443
No 88
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=28.52 E-value=57 Score=37.00 Aligned_cols=30 Identities=33% Similarity=0.437 Sum_probs=24.3
Q ss_pred eeeeEecccceeeEEEEEee---CceeEEEeee
Q 012198 436 LIKKKIGEGSFGTVYHAEWR---NSVSIFFFSI 465 (468)
Q Consensus 436 ~l~e~IGsG~FGtVyrg~W~---G~vaVk~~~~ 465 (468)
.+...||+|.|++|..|.-. +.+|||++..
T Consensus 59 ~i~~tig~g~f~~V~La~~~~t~~~VaiK~idk 91 (596)
T KOG0586|consen 59 VIIKTIGKGNFAKVKLARHILTGTEVAIKIIDK 91 (596)
T ss_pred eeeeeeccceeEEEEeeEecCCCceEEEEEehh
Confidence 34679999999999999876 5578998753
No 89
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=27.28 E-value=27 Score=39.68 Aligned_cols=20 Identities=40% Similarity=0.566 Sum_probs=17.1
Q ss_pred eeeeeEecccceeeEEEEEe
Q 012198 435 LLIKKKIGEGSFGTVYHAEW 454 (468)
Q Consensus 435 L~l~e~IGsG~FGtVyrg~W 454 (468)
+.+.+.||+|.|-|||||.=
T Consensus 42 ~k~~evLGrGafKtVYka~D 61 (632)
T KOG0584|consen 42 LKFDEVLGRGAFKTVYKAFD 61 (632)
T ss_pred eehhhhcccccceeeeeccc
Confidence 55667999999999999964
No 90
>PRK15047 N-hydroxyarylamine O-acetyltransferase; Provisional
Probab=25.82 E-value=1.2e+02 Score=30.97 Aligned_cols=55 Identities=16% Similarity=0.224 Sum_probs=40.7
Q ss_pred cccchhhhHHHHHHHhhhcCCCceEeccccccCC-----C-CCcceEEEeCCCeeEEEeCCC
Q 012198 206 SVGLCVHRALLFKVLADLINLPCRIAKGCKYCRR-----D-DASSCLVQIGPDREYLVDLLE 261 (468)
Q Consensus 206 k~GlcRHRALLFKvLAD~IGLPCrLVRG~~Y~~~-----d-d~a~~lVk~~~~reYIVDLM~ 261 (468)
+=|.|.+-..||..+=-.+|..++++.|.-+... . .-...+|.+ ++..||||.=.
T Consensus 65 RGGyCfE~N~Lf~~~L~~LGF~v~~~~arV~~~~~~~~~~~tH~~l~V~i-~~~~yLvDVGF 125 (281)
T PRK15047 65 RGGYCFEQNGLFERVLRELGFNVRSLLGRVVLSNPPALPPRTHRLLLVEL-EGEKWIADVGF 125 (281)
T ss_pred CCEEcHhHHHHHHHHHHHcCCcEEEEEEEEEecCCCCCCCcCcEEEEEEE-CCeeEEEEecC
Confidence 5699999999999999999999888888644321 1 112345666 56799999744
No 91
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=25.58 E-value=47 Score=37.10 Aligned_cols=30 Identities=20% Similarity=0.430 Sum_probs=24.8
Q ss_pred eeecCcceeeeeEecccceeeEEEEEeeCc
Q 012198 428 LEIRWSELLIKKKIGEGSFGTVYHAEWRNS 457 (468)
Q Consensus 428 weI~~~eL~l~e~IGsG~FGtVyrg~W~G~ 457 (468)
|-+....+..-+.||+|+||+||-..-+.+
T Consensus 180 qpvt~n~F~~~RvlGkGGFGEV~acqvraT 209 (591)
T KOG0986|consen 180 QPVTKNTFRVYRVLGKGGFGEVCACQVRAT 209 (591)
T ss_pred hhccccceeeeEEEecccccceeEEEEecc
Confidence 557778888999999999999997766544
No 92
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=22.19 E-value=34 Score=37.47 Aligned_cols=38 Identities=24% Similarity=0.408 Sum_probs=32.0
Q ss_pred ceeecCcceeeeeEecccceeeEEEEEeeCce---eEEEee
Q 012198 427 GLEIRWSELLIKKKIGEGSFGTVYHAEWRNSV---SIFFFS 464 (468)
Q Consensus 427 ~weI~~~eL~l~e~IGsG~FGtVyrg~W~G~v---aVk~~~ 464 (468)
+-.+..+.+++.++||.|.=|+||.++-.|+. |+|+++
T Consensus 71 ~~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmd 111 (459)
T KOG0610|consen 71 DGSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMD 111 (459)
T ss_pred CCccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEec
Confidence 34566789999999999999999999999984 677764
No 93
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=21.41 E-value=7.3 Score=41.27 Aligned_cols=30 Identities=40% Similarity=0.495 Sum_probs=23.1
Q ss_pred cceeeeeEecccceeeEEEEEeeCc---eeEEE
Q 012198 433 SELLIKKKIGEGSFGTVYHAEWRNS---VSIFF 462 (468)
Q Consensus 433 ~eL~l~e~IGsG~FGtVyrg~W~G~---vaVk~ 462 (468)
+.+.+.++||.|+||.||++.-+.+ +|||.
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~ 65 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKK 65 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEe
Confidence 4456789999999999999987744 34554
Done!