BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012203
(468 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/261 (42%), Positives = 163/261 (62%), Gaps = 1/261 (0%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + LG G FG + +C DK TG+ A K I+K ++ D+ S+ E++++ +L
Sbjct: 49 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD- 107
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L +ED+ Y +LV E+ GGELF + RFSE +A + Q++ + Y H+
Sbjct: 108 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK 167
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGGY 220
+VHRDLKPEN+LL +K+ + I++ DFGL+T+ E + + +G+ +YIAPEVL G Y
Sbjct: 168 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTY 227
Query: 221 NQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMG 280
++ DVWS GVILYILLSG PPF G + I V F W +S+SAKDL+
Sbjct: 228 DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRK 287
Query: 281 MLSTDPSQRLTARQVLDHSWM 301
ML+ PS R++AR LDH W+
Sbjct: 288 MLTYVPSMRISARDALDHEWI 308
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 227 bits (579), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/261 (42%), Positives = 163/261 (62%), Gaps = 1/261 (0%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + LG G FG + +C DK TG+ A K I+K ++ D+ S+ E++++ +L
Sbjct: 50 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD- 108
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L +ED+ Y +LV E+ GGELF + RFSE +A + Q++ + Y H+
Sbjct: 109 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK 168
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGGY 220
+VHRDLKPEN+LL +K+ + I++ DFGL+T+ E + + +G+ +YIAPEVL G Y
Sbjct: 169 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTY 228
Query: 221 NQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMG 280
++ DVWS GVILYILLSG PPF G + I V F W +S+SAKDL+
Sbjct: 229 DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRK 288
Query: 281 MLSTDPSQRLTARQVLDHSWM 301
ML+ PS R++AR LDH W+
Sbjct: 289 MLTYVPSMRISARDALDHEWI 309
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/261 (42%), Positives = 163/261 (62%), Gaps = 1/261 (0%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + LG G FG + +C DK TG+ A K I+K ++ D+ S+ E++++ +L
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD- 84
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L +ED+ Y +LV E+ GGELF + RFSE +A + Q++ + Y H+
Sbjct: 85 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK 144
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGGY 220
+VHRDLKPEN+LL +K+ + I++ DFGL+T+ E + + +G+ +YIAPEVL G Y
Sbjct: 145 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTY 204
Query: 221 NQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMG 280
++ DVWS GVILYILLSG PPF G + I V F W +S+SAKDL+
Sbjct: 205 DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRK 264
Query: 281 MLSTDPSQRLTARQVLDHSWM 301
ML+ PS R++AR LDH W+
Sbjct: 265 MLTYVPSMRISARDALDHEWI 285
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 110/261 (42%), Positives = 163/261 (62%), Gaps = 1/261 (0%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + LG G FG + +C DK TG+ A K I+K ++ D+ S+ E++++ +L
Sbjct: 32 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD- 90
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L +ED+ Y +LV E+ GGELF + RFSE +A + Q++ + Y H+
Sbjct: 91 HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHK 150
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGGY 220
+VHRDLKPEN+LL +K+ + I++ DFGL+T+ E + + +G+ +YIAPEVL G Y
Sbjct: 151 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTY 210
Query: 221 NQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMG 280
++ DVWS GVILYILLSG PPF G + I V F W +S+SAKDL+
Sbjct: 211 DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRK 270
Query: 281 MLSTDPSQRLTARQVLDHSWM 301
ML+ PS R++AR LDH W+
Sbjct: 271 MLTYVPSMRISARDALDHEWI 291
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 223 bits (567), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 109/261 (41%), Positives = 160/261 (61%), Gaps = 1/261 (0%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + LG G FG + +C DK TG+ A K I+K ++ D+ S+ E++++ +L
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD- 84
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN+ L +ED+ Y +LV E+ GGELF + RFSE +A + Q++ + Y H+
Sbjct: 85 HPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHK 144
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGGY 220
+VHRDLKPEN+LL +K+ + I++ DFGL+T+ E + +G+ +YIAPEVL G Y
Sbjct: 145 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTY 204
Query: 221 NQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMG 280
++ DVWS GVILYILLSG PPF G + I V F W +S+SAKDL+
Sbjct: 205 DEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRK 264
Query: 281 MLSTDPSQRLTARQVLDHSWM 301
L+ PS R++AR LDH W+
Sbjct: 265 XLTYVPSXRISARDALDHEWI 285
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/261 (43%), Positives = 154/261 (59%), Gaps = 2/261 (0%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ + LG G FG + C D+ T + +A K I K D ++ E+E++ +L
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN-KDTSTILREVELLKKLD- 79
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + ED ++V EL GGELF + K RFSE +A + Q+ + Y H+
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK 139
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGGY 220
+VHRDLKPENILL +K IK+ DFGL+T + + +G+ +YIAPEVL G Y
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTY 199
Query: 221 NQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMG 280
++ DVWSAGVILYILLSG PPF+G + I V T F W ISD AKDL+
Sbjct: 200 DEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRK 259
Query: 281 MLSTDPSQRLTARQVLDHSWM 301
ML+ PS R+TA Q L+H W+
Sbjct: 260 MLTFHPSLRITATQCLEHPWI 280
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 218 bits (555), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 113/261 (43%), Positives = 154/261 (59%), Gaps = 2/261 (0%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ + LG G FG + C D+ T + +A K I K D ++ E+E++ +L
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN-KDTSTILREVELLKKLD- 79
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + ED ++V EL GGELF + K RFSE +A + Q+ + Y H+
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK 139
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGGY 220
+VHRDLKPENILL +K IK+ DFGL+T + + +G+ +YIAPEVL G Y
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTY 199
Query: 221 NQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMG 280
++ DVWSAGVILYILLSG PPF+G + I V T F W ISD AKDL+
Sbjct: 200 DEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRK 259
Query: 281 MLSTDPSQRLTARQVLDHSWM 301
ML+ PS R+TA Q L+H W+
Sbjct: 260 MLTFHPSLRITATQCLEHPWI 280
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 218 bits (555), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 113/261 (43%), Positives = 154/261 (59%), Gaps = 2/261 (0%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ + LG G FG + C D+ T + +A K I K D ++ E+E++ +L
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN-KDTSTILREVELLKKLD- 79
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + ED ++V EL GGELF + K RFSE +A + Q+ + Y H+
Sbjct: 80 HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHK 139
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGGY 220
+VHRDLKPENILL +K IK+ DFGL+T + + +G+ +YIAPEVL G Y
Sbjct: 140 HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTY 199
Query: 221 NQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMG 280
++ DVWSAGVILYILLSG PPF+G + I V T F W ISD AKDL+
Sbjct: 200 DEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRK 259
Query: 281 MLSTDPSQRLTARQVLDHSWM 301
ML+ PS R+TA Q L+H W+
Sbjct: 260 MLTFHPSLRITATQCLEHPWI 280
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 217 bits (553), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 111/262 (42%), Positives = 161/262 (61%), Gaps = 6/262 (2%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI-MTRLSGH 101
+ L ++LG G F V+R C G+ +A K I +L D + KLE E + RL H
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQ---KLEREARICRLLKH 80
Query: 102 PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEI 161
PN+V L +E + +L+ +L GGELF + +SEA+A Q+++ VL+CH++
Sbjct: 81 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM 140
Query: 162 GVVHRDLKPENILLATKASSSPIKLADFGLATYIE-PGQSLLGTVGSPFYIAPEVLAGG- 219
GVVHRDLKPEN+LLA+K + +KLADFGLA +E Q+ G G+P Y++PEVL
Sbjct: 141 GVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDP 200
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
Y + D+W+ GVILYILL G PPFW + R++ ++ FPS WD ++ AKDL+
Sbjct: 201 YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLIN 260
Query: 280 GMLSTDPSQRLTARQVLDHSWM 301
ML+ +PS+R+TA + L H W+
Sbjct: 261 KMLTINPSKRITAAEALKHPWI 282
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/270 (39%), Positives = 164/270 (60%), Gaps = 4/270 (1%)
Query: 34 NQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIE 93
Q ++++ F + LG G F + + +K TG++FA K I K L E S++ EI
Sbjct: 15 KQAEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKG--KESSIENEIA 72
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQ 153
++ ++ H N+V L+ +YE ++++LVM+L +GGELF R+ + G ++E +A L Q++
Sbjct: 73 VLRKIK-HENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLD 131
Query: 154 VVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAP 213
V Y H +G+VHRDLKPEN+L ++ S I ++DFGL+ G + G+P Y+AP
Sbjct: 132 AVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAP 191
Query: 214 EVLAGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
EVLA Y++A D WS GVI YILL G PPF+ S++F+ + A+ F S WD ISD
Sbjct: 192 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISD 251
Query: 273 SAKDLVMGMLSTDPSQRLTARQVLDHSWMG 302
SAKD + ++ DP++R T Q H W+
Sbjct: 252 SAKDFIRNLMEKDPNKRYTCEQAARHPWIA 281
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 111/274 (40%), Positives = 164/274 (59%), Gaps = 6/274 (2%)
Query: 31 LDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKL 90
+ T + E + L ++LG G F V+R C G+ +A I +L D + KL
Sbjct: 1 MATITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQ---KL 57
Query: 91 EIEI-MTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM 149
E E + RL HPN+V L +E + +L+ +L GGELF + +SEA+A
Sbjct: 58 EREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ 117
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIE-PGQSLLGTVGSP 208
Q+++ VL+CH++GVVHR+LKPEN+LLA+K + +KLADFGLA +E Q+ G G+P
Sbjct: 118 QILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTP 177
Query: 209 FYIAPEVLAGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPW 267
Y++PEVL Y + D+W+ GVILYILL G PPFW + R++ ++ FPS W
Sbjct: 178 GYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEW 237
Query: 268 DHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
D ++ AKDL+ ML+ +PS+R+TA + L H W+
Sbjct: 238 DTVTPEAKDLINKMLTINPSKRITAAEALKHPWI 271
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 107/263 (40%), Positives = 158/263 (60%), Gaps = 1/263 (0%)
Query: 39 LRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRL 98
L +R+ ++LG G +G + +C DK TG A K I K + T + ++ E+ ++ +L
Sbjct: 2 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 99 SGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYC 158
HPN++ L +ED+ +LVME+ GGELF + +FSE +A V+ Q++ Y
Sbjct: 62 D-HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYL 120
Query: 159 HEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAG 218
H+ +VHRDLKPEN+LL +K+ + IK+ DFGL+ + E G + +G+ +YIAPEVL
Sbjct: 121 HKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRK 180
Query: 219 GYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLV 278
Y++ DVWS GVILYILL G PPF G T I V F W +SD AK LV
Sbjct: 181 KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLV 240
Query: 279 MGMLSTDPSQRLTARQVLDHSWM 301
ML+ +PS+R++A + L+H W+
Sbjct: 241 KLMLTYEPSKRISAEEALNHPWI 263
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 215 bits (547), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 107/263 (40%), Positives = 158/263 (60%), Gaps = 1/263 (0%)
Query: 39 LRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRL 98
L +R+ ++LG G +G + +C DK TG A K I K + T + ++ E+ ++ +L
Sbjct: 19 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 99 SGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYC 158
HPN++ L +ED+ +LVME+ GGELF + +FSE +A V+ Q++ Y
Sbjct: 79 D-HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYL 137
Query: 159 HEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAG 218
H+ +VHRDLKPEN+LL +K+ + IK+ DFGL+ + E G + +G+ +YIAPEVL
Sbjct: 138 HKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRK 197
Query: 219 GYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLV 278
Y++ DVWS GVILYILL G PPF G T I V F W +SD AK LV
Sbjct: 198 KYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLV 257
Query: 279 MGMLSTDPSQRLTARQVLDHSWM 301
ML+ +PS+R++A + L+H W+
Sbjct: 258 KLMLTYEPSKRISAEEALNHPWI 280
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 214 bits (545), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 109/270 (40%), Positives = 164/270 (60%), Gaps = 4/270 (1%)
Query: 34 NQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIE 93
Q ++R+ + LG G F + + DK T ++ A K IAK+ L E S++ EI
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEG--KEGSMENEIA 68
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQ 153
++ ++ HPN+V L +YE +++L+M+L +GGELF R+ + G ++E +A L Q++
Sbjct: 69 VLHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 154 VVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAP 213
V Y H++G+VHRDLKPEN+L + S I ++DFGL+ +PG L G+P Y+AP
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 214 EVLAGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
EVLA Y++A D WS GVI YILL G PPF+ +++F+ + A+ F S WD ISD
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 247
Query: 273 SAKDLVMGMLSTDPSQRLTARQVLDHSWMG 302
SAKD + ++ DP +R T Q L H W+
Sbjct: 248 SAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 214 bits (545), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 109/270 (40%), Positives = 164/270 (60%), Gaps = 4/270 (1%)
Query: 34 NQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIE 93
Q ++R+ + LG G F + + DK T ++ A K IAK+ L E S++ EI
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEG--KEGSMENEIA 68
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQ 153
++ ++ HPN+V L +YE +++L+M+L +GGELF R+ + G ++E +A L Q++
Sbjct: 69 VLHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 154 VVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAP 213
V Y H++G+VHRDLKPEN+L + S I ++DFGL+ +PG L G+P Y+AP
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 214 EVLAGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
EVLA Y++A D WS GVI YILL G PPF+ +++F+ + A+ F S WD ISD
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 247
Query: 273 SAKDLVMGMLSTDPSQRLTARQVLDHSWMG 302
SAKD + ++ DP +R T Q L H W+
Sbjct: 248 SAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 214 bits (545), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 109/270 (40%), Positives = 164/270 (60%), Gaps = 4/270 (1%)
Query: 34 NQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIE 93
Q ++R+ + LG G F + + DK T ++ A K IAK+ L E S++ EI
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEG--KEGSMENEIA 68
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQ 153
++ ++ HPN+V L +YE +++L+M+L +GGELF R+ + G ++E +A L Q++
Sbjct: 69 VLHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 154 VVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAP 213
V Y H++G+VHRDLKPEN+L + S I ++DFGL+ +PG L G+P Y+AP
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 214 EVLAGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
EVLA Y++A D WS GVI YILL G PPF+ +++F+ + A+ F S WD ISD
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 247
Query: 273 SAKDLVMGMLSTDPSQRLTARQVLDHSWMG 302
SAKD + ++ DP +R T Q L H W+
Sbjct: 248 SAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 109/270 (40%), Positives = 163/270 (60%), Gaps = 4/270 (1%)
Query: 34 NQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIE 93
Q ++R+ + LG G F + + DK T ++ A K IAK L E S++ EI
Sbjct: 11 KQAEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEG--KEGSMENEIA 68
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQ 153
++ ++ HPN+V L +YE +++L+M+L +GGELF R+ + G ++E +A L Q++
Sbjct: 69 VLHKIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLD 127
Query: 154 VVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAP 213
V Y H++G+VHRDLKPEN+L + S I ++DFGL+ +PG L G+P Y+AP
Sbjct: 128 AVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAP 187
Query: 214 EVLAGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
EVLA Y++A D WS GVI YILL G PPF+ +++F+ + A+ F S WD ISD
Sbjct: 188 EVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD 247
Query: 273 SAKDLVMGMLSTDPSQRLTARQVLDHSWMG 302
SAKD + ++ DP +R T Q L H W+
Sbjct: 248 SAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 104/264 (39%), Positives = 152/264 (57%), Gaps = 4/264 (1%)
Query: 38 NLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTR 97
++ + + L +G G +G +++ K T A K I K ++D K EIEIM
Sbjct: 23 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPK---YFVEDVDRFKQEIEIMKS 79
Query: 98 LSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLY 157
L HPN++ L +ED ++LVMELC GGELF R+ F E++A + ++ V Y
Sbjct: 80 LD-HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAY 138
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLA 217
CH++ V HRDLKPEN L T + SP+KL DFGLA +PG+ + VG+P+Y++P+VL
Sbjct: 139 CHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLE 198
Query: 218 GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDL 277
G Y D WSAGV++Y+LL G PPF T + +R FP W ++S A+ L
Sbjct: 199 GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESL 258
Query: 278 VMGMLSTDPSQRLTARQVLDHSWM 301
+ +L+ P QR+T+ Q L+H W
Sbjct: 259 IRRLLTKSPKQRITSLQALEHEWF 282
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 104/264 (39%), Positives = 152/264 (57%), Gaps = 4/264 (1%)
Query: 38 NLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTR 97
++ + + L +G G +G +++ K T A K I K ++D K EIEIM
Sbjct: 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPK---YFVEDVDRFKQEIEIMKS 62
Query: 98 LSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLY 157
L HPN++ L +ED ++LVMELC GGELF R+ F E++A + ++ V Y
Sbjct: 63 LD-HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAY 121
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLA 217
CH++ V HRDLKPEN L T + SP+KL DFGLA +PG+ + VG+P+Y++P+VL
Sbjct: 122 CHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLE 181
Query: 218 GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDL 277
G Y D WSAGV++Y+LL G PPF T + +R FP W ++S A+ L
Sbjct: 182 GLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESL 241
Query: 278 VMGMLSTDPSQRLTARQVLDHSWM 301
+ +L+ P QR+T+ Q L+H W
Sbjct: 242 IRRLLTKSPKQRITSLQALEHEWF 265
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 109/271 (40%), Positives = 167/271 (61%), Gaps = 7/271 (2%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
Q +N+R+ F+ + LG G F + + + TG++FA K I K + S++ EI +
Sbjct: 3 QTTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFR---DSSLENEIAV 59
Query: 95 MTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
+ ++ H N+V L+ +YE + +LVM+L +GGELF R+ + G ++E +A ++ Q++
Sbjct: 60 LKKIK-HENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSA 118
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
V Y HE G+VHRDLKPEN+L T +S I + DFGL+ +E + G+P Y+APE
Sbjct: 119 VKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK-MEQNGIMSTACGTPGYVAPE 177
Query: 215 VLAGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDS 273
VLA Y++A D WS GVI YILL G PPF+ T+S++F+ ++ F S WD IS+S
Sbjct: 178 VLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISES 237
Query: 274 AKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
AKD + +L DP++R T + L H W+ DG
Sbjct: 238 AKDFICHLLEKDPNERYTCEKALSHPWI-DG 267
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 211 bits (538), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 109/267 (40%), Positives = 163/267 (61%), Gaps = 6/267 (2%)
Query: 38 NLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI-MT 96
++ + + L ++LG G F V+R C TG+ +A K I +L D + KLE E +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ---KLEREARIC 57
Query: 97 RLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVL 156
RL HPN+V L +E + +LV +L GGELF + +SEA+A Q+++ V
Sbjct: 58 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN 117
Query: 157 YCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIE-PGQSLLGTVGSPFYIAPEV 215
+CH G+VHRDLKPEN+LLA+K+ + +KLADFGLA ++ Q+ G G+P Y++PEV
Sbjct: 118 HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEV 177
Query: 216 LAGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSA 274
L Y + D+W+ GVILYILL G PPFW + R++ ++ FPS WD ++ A
Sbjct: 178 LRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEA 237
Query: 275 KDLVMGMLSTDPSQRLTARQVLDHSWM 301
KDL+ ML+ +P++R+TA + L H W+
Sbjct: 238 KDLINKMLTINPAKRITASEALKHPWI 264
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 211 bits (538), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 107/267 (40%), Positives = 162/267 (60%), Gaps = 6/267 (2%)
Query: 38 NLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI-MT 96
++ + + L + +G G F V+R C TG +A K I +L D + KLE E +
Sbjct: 1 SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQ---KLEREARIC 57
Query: 97 RLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVL 156
RL H N+V L +E + +LV +L GGELF + +SEA+A Q+++ VL
Sbjct: 58 RLLKHSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVL 117
Query: 157 YCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIE-PGQSLLGTVGSPFYIAPEV 215
+CH++GVVHRDLKPEN+LLA+K + +KLADFGLA ++ Q+ G G+P Y++PEV
Sbjct: 118 HCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEV 177
Query: 216 LAG-GYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSA 274
L Y + D+W+ GVILYILL G PPFW + +++ ++ FPS WD ++ A
Sbjct: 178 LRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEA 237
Query: 275 KDLVMGMLSTDPSQRLTARQVLDHSWM 301
K+L+ ML+ +P++R+TA + L H W+
Sbjct: 238 KNLINQMLTINPAKRITAHEALKHPWV 264
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/310 (36%), Positives = 176/310 (56%), Gaps = 8/310 (2%)
Query: 34 NQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIE 93
N + + + + ++LG G F V+R C K TG FA K I +L D ++ ++ E
Sbjct: 22 NASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK-LEREAR 80
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQ 153
I +L HPN+V L ++E + +LV +L GGELF + +SEA+A Q+++
Sbjct: 81 ICRKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILE 139
Query: 154 VVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAP 213
+ YCH G+VHR+LKPEN+LLA+KA + +KLADFGLA + ++ G G+P Y++P
Sbjct: 140 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSP 199
Query: 214 EVLAGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
EVL Y++ D+W+ GVILYILL G PPFW + R++ ++ +PS WD ++
Sbjct: 200 EVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTP 259
Query: 273 SAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPEKLSGNKIEDC-KEWD----LGSG 327
AK L+ ML+ +P +R+TA Q L W+ + + + DC K+++ L
Sbjct: 260 EAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDCLKKFNARRKLKGA 319
Query: 328 SFSTQIIPRN 337
+T I RN
Sbjct: 320 ILTTMIATRN 329
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/267 (40%), Positives = 163/267 (61%), Gaps = 6/267 (2%)
Query: 38 NLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI-MT 96
++ + + L ++LG G F V+R C TG+ +A K I +L D + KLE E +
Sbjct: 1 SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQ---KLEREARIC 57
Query: 97 RLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVL 156
RL HPN+V L +E + +LV +L GGELF + +SEA+A Q+++ V
Sbjct: 58 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVN 117
Query: 157 YCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIE-PGQSLLGTVGSPFYIAPEV 215
+CH G+VHRDLKPEN+LLA+K+ + +KLADFGLA ++ Q+ G G+P Y++PEV
Sbjct: 118 HCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEV 177
Query: 216 LAGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSA 274
L Y + D+W+ GVILYILL G PPFW + R++ ++ FPS WD ++ A
Sbjct: 178 LRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEA 237
Query: 275 KDLVMGMLSTDPSQRLTARQVLDHSWM 301
KDL+ ML+ +P++R+TA + L H W+
Sbjct: 238 KDLINKMLTINPAKRITASEALKHPWI 264
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 208 bits (529), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 104/266 (39%), Positives = 160/266 (60%), Gaps = 3/266 (1%)
Query: 37 SNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMT 96
+ + + + ++LG G F V+R C K TG FA K I +L + D + ++ E I
Sbjct: 1 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICR 59
Query: 97 RLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVL 156
+L HPN+V L ++E + +LV +L GGELF + +SEA+A Q+++ +
Sbjct: 60 KLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA 118
Query: 157 YCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVL 216
YCH G+VHR+LKPEN+LLA+KA + +KLADFGLA + ++ G G+P Y++PEVL
Sbjct: 119 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL 178
Query: 217 AGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
Y++ D+W+ GVILYILL G PPFW + R++ ++ +PS WD ++ AK
Sbjct: 179 KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK 238
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSWM 301
L+ ML+ +P +R+TA Q L W+
Sbjct: 239 SLIDSMLTVNPKKRITADQALKVPWI 264
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 208 bits (529), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 104/266 (39%), Positives = 160/266 (60%), Gaps = 3/266 (1%)
Query: 37 SNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMT 96
+ + + + ++LG G F V+R C K TG FA K I +L + D + ++ E I
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICR 60
Query: 97 RLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVL 156
+L HPN+V L ++E + +LV +L GGELF + +SEA+A Q+++ +
Sbjct: 61 KLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA 119
Query: 157 YCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVL 216
YCH G+VHR+LKPEN+LLA+KA + +KLADFGLA + ++ G G+P Y++PEVL
Sbjct: 120 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL 179
Query: 217 AGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
Y++ D+W+ GVILYILL G PPFW + R++ ++ +PS WD ++ AK
Sbjct: 180 KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK 239
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSWM 301
L+ ML+ +P +R+TA Q L W+
Sbjct: 240 SLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 208 bits (529), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 104/266 (39%), Positives = 160/266 (60%), Gaps = 3/266 (1%)
Query: 37 SNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMT 96
+ + + + ++LG G F V+R C K TG FA K I +L + D + ++ E I
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICR 60
Query: 97 RLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVL 156
+L HPN+V L ++E + +LV +L GGELF + +SEA+A Q+++ +
Sbjct: 61 KLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIA 119
Query: 157 YCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVL 216
YCH G+VHR+LKPEN+LLA+KA + +KLADFGLA + ++ G G+P Y++PEVL
Sbjct: 120 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL 179
Query: 217 AGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
Y++ D+W+ GVILYILL G PPFW + R++ ++ +PS WD ++ AK
Sbjct: 180 KKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAK 239
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSWM 301
L+ ML+ +P +R+TA Q L W+
Sbjct: 240 SLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 111/297 (37%), Positives = 173/297 (58%), Gaps = 11/297 (3%)
Query: 33 TNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEI 92
T++ +L E + ++LG G +G + +C DK T A K I K + T + + ++ E+
Sbjct: 29 TSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLE-EV 87
Query: 93 EIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLM 152
++ +L HPN++ L +ED+ +LVME GGELF + +F+E +A V+ Q++
Sbjct: 88 AVL-KLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVL 146
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIA 212
V Y H+ +VHRDLKPEN+LL +K + IK+ DFGL+ E + + +G+ +YIA
Sbjct: 147 SGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIA 206
Query: 213 PEVLAGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
PEVL Y++ DVWS GVIL+ILL+G PPF G T I V F S W ++S+
Sbjct: 207 PEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSE 266
Query: 273 SAKDLVMGMLSTDPSQRLTARQVLDHSWMGD-------GIQDPEKLSGNKIEDCKEW 322
AKDL+ ML D +R++A+Q L+H W+ + GI+ P N IE+ +++
Sbjct: 267 GAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPS--LANAIENMRKF 321
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 201 bits (512), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 105/262 (40%), Positives = 157/262 (59%), Gaps = 6/262 (2%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI-MTRLSGH 101
+ L ++LG G F V+R C K + +A K I +L D + KLE E + RL H
Sbjct: 33 YQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQ---KLEREARICRLLKH 89
Query: 102 PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEI 161
PN+V L +E + +LV +L GGELF + +SEA+A Q+++ V + H+
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQH 149
Query: 162 GVVHRDLKPENILLATKASSSPIKLADFGLATYIE-PGQSLLGTVGSPFYIAPEVLAGG- 219
+VHRDLKPEN+LLA+K + +KLADFGLA ++ Q+ G G+P Y++PEVL
Sbjct: 150 DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDP 209
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
Y + D+W+ GVILYILL G PPFW + +++ ++ FPS WD ++ AK+L+
Sbjct: 210 YGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLIN 269
Query: 280 GMLSTDPSQRLTARQVLDHSWM 301
ML+ +P++R+TA Q L H W+
Sbjct: 270 QMLTINPAKRITADQALKHPWV 291
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/270 (38%), Positives = 151/270 (55%), Gaps = 9/270 (3%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAK---DRLVTIDDERSV-KLEIEIMT 96
E + ++LG G +G + +C +K A K I K D+ DD +++ K EI
Sbjct: 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYN 95
Query: 97 RLS-----GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQL 151
+S HPN++ L V+ED+ Y +LV E GGELF ++ +F E +A + Q+
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQI 155
Query: 152 MQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYI 211
+ + Y H+ +VHRD+KPENILL K S IK+ DFGL+++ L +G+ +YI
Sbjct: 156 LSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYI 215
Query: 212 APEVLAGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHIS 271
APEVL YN+ DVWS GVI+YILL G PPF G I V F N W +IS
Sbjct: 216 APEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNIS 275
Query: 272 DSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
D AK+L+ ML+ D ++R TA + L+ W+
Sbjct: 276 DEAKELIKLMLTYDYNKRCTAEEALNSRWI 305
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 112/274 (40%), Positives = 164/274 (59%), Gaps = 10/274 (3%)
Query: 31 LDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKL 90
+D + L + F + +LG G ++ C K T + +A K + K T+D ++ V+
Sbjct: 43 IDGSNRDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKK----TVD-KKIVRT 97
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQ 150
EI ++ RLS HPN++ LK ++E + LV+EL GGELF R+ + G +SE +A Q
Sbjct: 98 EIGVLLRLS-HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQ 156
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTV-GSPF 209
+++ V Y HE G+VHRDLKPEN+L AT A +P+K+ADFGL+ +E Q L+ TV G+P
Sbjct: 157 ILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE-HQVLMKTVCGTPG 215
Query: 210 YIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGNTKSR-IFDAVRTADLRFPSNPW 267
Y APE+L G Y D+WS G+I YILL G PF+ + +F + + F S W
Sbjct: 216 YCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWW 275
Query: 268 DHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
D +S +AKDLV ++ DP +RLT Q L H W+
Sbjct: 276 DEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWV 309
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/267 (39%), Positives = 150/267 (56%), Gaps = 15/267 (5%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
LG G F + R C K + + FA K I+K R+ E + + EI + GHPN+V L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISK-RM-----EANTQKEITALKLCEGHPNIVKLH 72
Query: 109 AVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDL 168
V+ D+ + LVMEL GGELF R++K FSE EA + +L+ V + H++GVVHRDL
Sbjct: 73 EVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDL 132
Query: 169 KPENILLATKASSSPIKLADFGLATYIEPGQSLLGT-VGSPFYIAPEVL-AGGYNQAADV 226
KPEN+L + + IK+ DFG A P L T + Y APE+L GY+++ D+
Sbjct: 133 KPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDL 192
Query: 227 WSAGVILYILLSGMPPFWGNTKS-------RIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
WS GVILY +LSG PF + +S I ++ D F W ++S AKDL+
Sbjct: 193 WSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQ 252
Query: 280 GMLSTDPSQRLTARQVLDHSWMGDGIQ 306
G+L+ DP++RL + + W+ DG Q
Sbjct: 253 GLLTVDPNKRLKMSGLRYNEWLQDGSQ 279
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 157/275 (57%), Gaps = 12/275 (4%)
Query: 39 LRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVT-----IDDERSVKLEIE 93
LR+ +++ + LG G G +++ ++ T + A K I+K + D +V+ EIE
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQ 153
I+ +L+ HP ++ +K ++ EDY ++V+EL GGELF ++ R EA ++ F Q++
Sbjct: 68 ILKKLN-HPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 154 VVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAP 213
V Y HE G++HRDLKPEN+LL+++ IK+ DFG + + + G+P Y+AP
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 185
Query: 214 EVLA----GGYNQAADVWSAGVILYILLSGMPPFWGN-TKSRIFDAVRTADLRFPSNPWD 268
EVL GYN+A D WS GVIL+I LSG PPF + T+ + D + + F W
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
Query: 269 HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
+S+ A DLV +L DP R T + L H W+ D
Sbjct: 246 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 157/275 (57%), Gaps = 12/275 (4%)
Query: 39 LRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVT-----IDDERSVKLEIE 93
LR+ +++ + LG G G +++ ++ T + A K I+K + D +V+ EIE
Sbjct: 7 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 66
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQ 153
I+ +L+ HP ++ +K ++ EDY ++V+EL GGELF ++ R EA ++ F Q++
Sbjct: 67 ILKKLN-HPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 124
Query: 154 VVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAP 213
V Y HE G++HRDLKPEN+LL+++ IK+ DFG + + + G+P Y+AP
Sbjct: 125 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 184
Query: 214 EVLA----GGYNQAADVWSAGVILYILLSGMPPFWGN-TKSRIFDAVRTADLRFPSNPWD 268
EVL GYN+A D WS GVIL+I LSG PPF + T+ + D + + F W
Sbjct: 185 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 244
Query: 269 HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
+S+ A DLV +L DP R T + L H W+ D
Sbjct: 245 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 279
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 157/275 (57%), Gaps = 12/275 (4%)
Query: 39 LRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVT-----IDDERSVKLEIE 93
LR+ +++ + LG G G +++ ++ T + A K I+K + D +V+ EIE
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQ 153
I+ +L+ HP ++ +K ++ EDY ++V+EL GGELF ++ R EA ++ F Q++
Sbjct: 68 ILKKLN-HPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 154 VVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAP 213
V Y HE G++HRDLKPEN+LL+++ IK+ DFG + + + G+P Y+AP
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 185
Query: 214 EVLA----GGYNQAADVWSAGVILYILLSGMPPFWGN-TKSRIFDAVRTADLRFPSNPWD 268
EVL GYN+A D WS GVIL+I LSG PPF + T+ + D + + F W
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
Query: 269 HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
+S+ A DLV +L DP R T + L H W+ D
Sbjct: 246 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 157/275 (57%), Gaps = 12/275 (4%)
Query: 39 LRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVT-----IDDERSVKLEIE 93
LR+ +++ + LG G G +++ ++ T + A K I+K + D +V+ EIE
Sbjct: 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 67
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQ 153
I+ +L+ HP ++ +K ++ EDY ++V+EL GGELF ++ R EA ++ F Q++
Sbjct: 68 ILKKLN-HPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 125
Query: 154 VVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAP 213
V Y HE G++HRDLKPEN+LL+++ IK+ DFG + + + G+P Y+AP
Sbjct: 126 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 185
Query: 214 EVLA----GGYNQAADVWSAGVILYILLSGMPPFWGN-TKSRIFDAVRTADLRFPSNPWD 268
EVL GYN+A D WS GVIL+I LSG PPF + T+ + D + + F W
Sbjct: 186 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 245
Query: 269 HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
+S+ A DLV +L DP R T + L H W+ D
Sbjct: 246 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 189 bits (481), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 157/275 (57%), Gaps = 12/275 (4%)
Query: 39 LRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVT-----IDDERSVKLEIE 93
LR+ +++ + LG G G +++ ++ T + A K I+K + D +V+ EIE
Sbjct: 14 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIE 73
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQ 153
I+ +L+ HP ++ +K ++ EDY ++V+EL GGELF ++ R EA ++ F Q++
Sbjct: 74 ILKKLN-HPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 131
Query: 154 VVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAP 213
V Y HE G++HRDLKPEN+LL+++ IK+ DFG + + + G+P Y+AP
Sbjct: 132 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 191
Query: 214 EVLA----GGYNQAADVWSAGVILYILLSGMPPFWGN-TKSRIFDAVRTADLRFPSNPWD 268
EVL GYN+A D WS GVIL+I LSG PPF + T+ + D + + F W
Sbjct: 192 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 251
Query: 269 HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
+S+ A DLV +L DP R T + L H W+ D
Sbjct: 252 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 286
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/275 (36%), Positives = 157/275 (57%), Gaps = 12/275 (4%)
Query: 39 LRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVT-----IDDERSVKLEIE 93
LR+ +++ + LG G G +++ ++ T + A + I+K + D +V+ EIE
Sbjct: 147 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIE 206
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQ 153
I+ +L+ HP ++ +K ++ EDY ++V+EL GGELF ++ R EA ++ F Q++
Sbjct: 207 ILKKLN-HPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 264
Query: 154 VVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAP 213
V Y HE G++HRDLKPEN+LL+++ IK+ DFG + + + G+P Y+AP
Sbjct: 265 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 324
Query: 214 EVLA----GGYNQAADVWSAGVILYILLSGMPPFWGN-TKSRIFDAVRTADLRFPSNPWD 268
EVL GYN+A D WS GVIL+I LSG PPF + T+ + D + + F W
Sbjct: 325 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 384
Query: 269 HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
+S+ A DLV +L DP R T + L H W+ D
Sbjct: 385 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 419
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/275 (36%), Positives = 157/275 (57%), Gaps = 12/275 (4%)
Query: 39 LRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVT-----IDDERSVKLEIE 93
LR+ +++ + LG G G +++ ++ T + A + I+K + D +V+ EIE
Sbjct: 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIE 192
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQ 153
I+ +L+ HP ++ +K ++ EDY ++V+EL GGELF ++ R EA ++ F Q++
Sbjct: 193 ILKKLN-HPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 250
Query: 154 VVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAP 213
V Y HE G++HRDLKPEN+LL+++ IK+ DFG + + + G+P Y+AP
Sbjct: 251 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 310
Query: 214 EVL----AGGYNQAADVWSAGVILYILLSGMPPFWGN-TKSRIFDAVRTADLRFPSNPWD 268
EVL GYN+A D WS GVIL+I LSG PPF + T+ + D + + F W
Sbjct: 311 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 370
Query: 269 HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
+S+ A DLV +L DP R T + L H W+ D
Sbjct: 371 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 405
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 186 bits (472), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/270 (37%), Positives = 161/270 (59%), Gaps = 12/270 (4%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI-MTRLSGH 101
+ L + +G G F V+R C ++ TG+ FA K + + + + L+ E + + H
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 102 PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGR----FSEAEARVLFMQLMQVVLY 157
P++V+L Y + +++V E G +L + K +SEA A Q+++ + Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLL---GTVGSPFYIAPE 214
CH+ ++HRD+KPEN+LLA+K +S+P+KL DFG+A I+ G+S L G VG+P ++APE
Sbjct: 146 CHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVA--IQLGESGLVAGGRVGTPHFMAPE 203
Query: 215 VLAGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDS 273
V+ Y + DVW GVIL+ILLSG PF+G TK R+F+ + + W HIS+S
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISES 262
Query: 274 AKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
AKDLV ML DP++R+T + L+H W+ +
Sbjct: 263 AKDLVRRMLMLDPAERITVYEALNHPWLKE 292
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 186 bits (471), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 101/270 (37%), Positives = 151/270 (55%), Gaps = 6/270 (2%)
Query: 37 SNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTID---DERSVKLEIE 93
S + + + +G++LG GQF ++R C K TG+ +A K I K RL + ++ E+
Sbjct: 1 SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 60
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQ 153
I+ + HPN++ L ++E++ V L++EL +GGELF L + +E EA Q++
Sbjct: 61 ILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD 119
Query: 154 VVLYCHEIGVVHRDLKPENILLATKASSSP-IKLADFGLATYIEPGQSLLGTVGSPFYIA 212
V Y H + H DLKPENI+L K +P IKL DFG+A IE G G+P ++A
Sbjct: 120 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVA 179
Query: 213 PEVLAGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHIS 271
PE++ AD+WS GVI YILLSG PF G TK + + F + + S
Sbjct: 180 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTS 239
Query: 272 DSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
+ AKD + +L DP +R+T Q L+HSW+
Sbjct: 240 ELAKDFIRRLLVKDPKRRMTIAQSLEHSWI 269
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 100/270 (37%), Positives = 150/270 (55%), Gaps = 6/270 (2%)
Query: 37 SNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTID---DERSVKLEIE 93
S + + + +G++LG GQF ++R C K TG+ +A K I K RL + ++ E+
Sbjct: 22 SMVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVN 81
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQ 153
I+ + HPN++ L ++E++ V L++EL +GGELF L + +E EA Q++
Sbjct: 82 ILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD 140
Query: 154 VVLYCHEIGVVHRDLKPENILLATKASSSP-IKLADFGLATYIEPGQSLLGTVGSPFYIA 212
V Y H + H DLKPENI+L K +P IKL DFG+A IE G G+P ++A
Sbjct: 141 GVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVA 200
Query: 213 PEVLAGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHIS 271
PE++ AD+WS GVI YILLSG PF G TK + + F + + S
Sbjct: 201 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTS 260
Query: 272 DSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
+ AKD + +L DP +R+ Q L+HSW+
Sbjct: 261 ELAKDFIRRLLVKDPKRRMXIAQSLEHSWI 290
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 153/276 (55%), Gaps = 6/276 (2%)
Query: 31 LDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTID---DERS 87
+ T + ++ + + +G++LG GQF ++R C K TG+ +A K I K RL +
Sbjct: 2 MSTFRQEDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREE 61
Query: 88 VKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVL 147
++ E+ I+ + HPN++ L ++E++ V L++EL +GGELF L + +E EA
Sbjct: 62 IEREVNILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQF 120
Query: 148 FMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSP-IKLADFGLATYIEPGQSLLGTVG 206
Q++ V Y H + H DLKPENI+L K +P IKL DFG+A IE G G
Sbjct: 121 LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFG 180
Query: 207 SPFYIAPEVLAGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSN 265
+P ++APE++ AD+WS GVI YILLSG PF G TK + + F
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEE 240
Query: 266 PWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
+ + S+ AKD + +L DP +R+ Q L+HSW+
Sbjct: 241 YFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWI 276
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 106/273 (38%), Positives = 149/273 (54%), Gaps = 14/273 (5%)
Query: 38 NLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL------VTIDD-ERSVKL 90
N+ + + G++LG GQF V++ C +K TG +A K I K R V+ +D ER V +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQ 150
EI HPNV+ L VYE++ V L++EL AGGELF L + +E EA Q
Sbjct: 68 LKEIQ-----HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLATKASSSP-IKLADFGLATYIEPGQSLLGTVGSPF 209
++ V Y H + + H DLKPENI+L + P IK+ DFGLA I+ G G+P
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPA 182
Query: 210 YIAPEVLAGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWD 268
++APE++ AD+WS GVI YILLSG PF G+TK V + F +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 269 HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
+ S AKD + +L DP +R+T + L H W+
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 106/273 (38%), Positives = 149/273 (54%), Gaps = 14/273 (5%)
Query: 38 NLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL------VTIDD-ERSVKL 90
N+ + + G++LG GQF V++ C +K TG +A K I K R V+ +D ER V +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQ 150
EI HPNV+ L VYE++ V L++EL AGGELF L + +E EA Q
Sbjct: 68 LKEIQ-----HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLATKASSSP-IKLADFGLATYIEPGQSLLGTVGSPF 209
++ V Y H + + H DLKPENI+L + P IK+ DFGLA I+ G G+P
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 210 YIAPEVLAGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWD 268
++APE++ AD+WS GVI YILLSG PF G+TK V + F +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 269 HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
+ S AKD + +L DP +R+T + L H W+
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/275 (38%), Positives = 150/275 (54%), Gaps = 18/275 (6%)
Query: 38 NLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL------VTIDD-ERSVKL 90
N+ + + G++LG GQF V++ C +K TG +A K I K R V+ +D ER V +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQ 150
EI HPNV+ L VYE++ V L++EL AGGELF L + +E EA Q
Sbjct: 68 LKEIQ-----HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLATKASSSP-IKLADFGLATYIEPGQSLLGTVGSPF 209
++ V Y H + + H DLKPENI+L + P IK+ DFGLA I+ G G+P
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 210 YIAPEVLAGGYNQ---AADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNP 266
++APE++ Y AD+WS GVI YILLSG PF G+TK V + F
Sbjct: 183 FVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY 240
Query: 267 WDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
+ + S AKD + +L DP +R+T + L H W+
Sbjct: 241 FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 106/273 (38%), Positives = 149/273 (54%), Gaps = 14/273 (5%)
Query: 38 NLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL------VTIDD-ERSVKL 90
N+ + + G++LG GQF V++ C +K TG +A K I K R V+ +D ER V +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQ 150
EI HPNV+ L VYE++ V L++EL AGGELF L + +E EA Q
Sbjct: 68 LKEIQ-----HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLATKASSSP-IKLADFGLATYIEPGQSLLGTVGSPF 209
++ V Y H + + H DLKPENI+L + P IK+ DFGLA I+ G G+P
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 210 YIAPEVLAGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWD 268
++APE++ AD+WS GVI YILLSG PF G+TK V + F +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 269 HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
+ S AKD + +L DP +R+T + L H W+
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/275 (38%), Positives = 150/275 (54%), Gaps = 18/275 (6%)
Query: 38 NLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL------VTIDD-ERSVKL 90
N+ + + G++LG GQF V++ C +K TG +A K I K R V+ +D ER V +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQ 150
EI HPNV+ L VYE++ V L++EL AGGELF L + +E EA Q
Sbjct: 68 LKEIQ-----HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLATKASSSP-IKLADFGLATYIEPGQSLLGTVGSPF 209
++ V Y H + + H DLKPENI+L + P IK+ DFGLA I+ G G+P
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 210 YIAPEVLAGGYNQ---AADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNP 266
++APE++ Y AD+WS GVI YILLSG PF G+TK V + F
Sbjct: 183 FVAPEIV--NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEY 240
Query: 267 WDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
+ + S AKD + +L DP +R+T + L H W+
Sbjct: 241 FSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 106/273 (38%), Positives = 149/273 (54%), Gaps = 14/273 (5%)
Query: 38 NLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL------VTIDD-ERSVKL 90
N+ + + G++LG GQF V++ C +K TG +A K I K R V+ +D ER V +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQ 150
EI HPNV+ L VYE++ V L++EL AGGELF L + +E EA Q
Sbjct: 68 LKEIQ-----HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLATKASSSP-IKLADFGLATYIEPGQSLLGTVGSPF 209
++ V Y H + + H DLKPENI+L + P IK+ DFGLA I+ G G+P
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 210 YIAPEVLAGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWD 268
++APE++ AD+WS GVI YILLSG PF G+TK V + F +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 269 HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
+ S AKD + +L DP +R+T + L H W+
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 106/273 (38%), Positives = 149/273 (54%), Gaps = 14/273 (5%)
Query: 38 NLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL------VTIDD-ERSVKL 90
N+ + + G++LG GQF V++ C +K TG +A K I K R V+ +D ER V +
Sbjct: 7 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 66
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQ 150
EI HPNV+ L VYE++ V L++EL AGGELF L + +E EA Q
Sbjct: 67 LKEIQ-----HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 121
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLATKASSSP-IKLADFGLATYIEPGQSLLGTVGSPF 209
++ V Y H + + H DLKPENI+L + P IK+ DFGLA I+ G G+P
Sbjct: 122 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 181
Query: 210 YIAPEVLAGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWD 268
++APE++ AD+WS GVI YILLSG PF G+TK V + F +
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 241
Query: 269 HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
+ S AKD + +L DP +R+T + L H W+
Sbjct: 242 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 274
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 182 bits (461), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 106/273 (38%), Positives = 149/273 (54%), Gaps = 14/273 (5%)
Query: 38 NLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL------VTIDD-ERSVKL 90
N+ + + G++LG GQF V++ C +K TG +A K I K R V+ +D ER V +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQ 150
EI HPNV+ L VYE++ V L++EL AGGELF L + +E EA Q
Sbjct: 68 LKEIQ-----HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLATKASSSP-IKLADFGLATYIEPGQSLLGTVGSPF 209
++ V Y H + + H DLKPENI+L + P IK+ DFGLA I+ G G+P
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 210 YIAPEVL-AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWD 268
++APE++ AD+WS GVI YILLSG PF G+TK V + F +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 269 HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
+ S AKD + +L DP +R+T + L H W+
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 181 bits (460), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 106/273 (38%), Positives = 149/273 (54%), Gaps = 14/273 (5%)
Query: 38 NLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL------VTIDD-ERSVKL 90
N+ + + G++LG GQF V++ C +K TG +A K I K R V+ +D ER V +
Sbjct: 7 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 66
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQ 150
EI HPNV+ L VYE++ V L++EL AGGELF L + +E EA Q
Sbjct: 67 LKEIQ-----HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 121
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLATKASSSP-IKLADFGLATYIEPGQSLLGTVGSPF 209
++ V Y H + + H DLKPENI+L + P IK+ DFGLA I+ G G+P
Sbjct: 122 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 181
Query: 210 YIAPEVL-AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWD 268
++APE++ AD+WS GVI YILLSG PF G+TK V + F +
Sbjct: 182 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 241
Query: 269 HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
+ S AKD + +L DP +R+T + L H W+
Sbjct: 242 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 274
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 181 bits (460), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 106/273 (38%), Positives = 149/273 (54%), Gaps = 14/273 (5%)
Query: 38 NLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL------VTIDD-ERSVKL 90
N+ + + G++LG GQF V++ C +K TG +A K I K R V+ +D ER V +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQ 150
EI HPNV+ L VYE++ V L++EL AGGELF L + +E EA Q
Sbjct: 68 LKEIQ-----HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLATKASSSP-IKLADFGLATYIEPGQSLLGTVGSPF 209
++ V Y H + + H DLKPENI+L + P IK+ DFGLA I+ G G+P
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 210 YIAPEVLAGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWD 268
++APE++ AD+WS GVI YILLSG PF G+TK V + F +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 269 HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
+ S AKD + +L DP +R+T + L H W+
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 181 bits (459), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 106/273 (38%), Positives = 149/273 (54%), Gaps = 14/273 (5%)
Query: 38 NLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL------VTIDD-ERSVKL 90
N+ + + G++LG GQF V++ C +K TG +A K I K R V+ +D ER V +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQ 150
EI HPNV+ L VYE++ V L++EL AGGELF L + +E EA Q
Sbjct: 68 LKEIQ-----HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLATKASSSP-IKLADFGLATYIEPGQSLLGTVGSPF 209
++ V Y H + + H DLKPENI+L + P IK+ DFGLA I+ G G+P
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 210 YIAPEVLAGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWD 268
++APE++ AD+WS GVI YILLSG PF G+TK V + F +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 269 HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
+ S AKD + +L DP +R+T + L H W+
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 181 bits (459), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 106/273 (38%), Positives = 147/273 (53%), Gaps = 13/273 (4%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHP 102
+ + + +G G + V + C K T FA K I K + R EIEI+ R HP
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK-------RDPTEEIEILLRYGQHP 76
Query: 103 NVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIG 162
N++ LK VY+D YV++V EL GGEL ++ + FSE EA + + + V Y H G
Sbjct: 77 NIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG 136
Query: 163 VVHRDLKPENILLATKASS-SPIKLADFGLATYIEPGQSLLGT-VGSPFYIAPEVLA-GG 219
VVHRDLKP NIL ++ + I++ DFG A + LL T + ++APEVL G
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQG 196
Query: 220 YNQAADVWSAGVILYILLSGMPPFWG---NTKSRIFDAVRTADLRFPSNPWDHISDSAKD 276
Y+ A D+WS GV+LY +L+G PF +T I + + W+ +SD+AKD
Sbjct: 197 YDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKD 256
Query: 277 LVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPE 309
LV ML DP QRLTA VL H W+ Q P+
Sbjct: 257 LVSKMLHVDPHQRLTAALVLRHPWIVHWDQLPQ 289
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 180 bits (457), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/266 (37%), Positives = 144/266 (54%), Gaps = 16/266 (6%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKL------EIEIMTRLSGHP 102
LG G V+R C K T + +A K I + E +L E++I+ ++SGHP
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84
Query: 103 NVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIG 162
N++ LK YE + LV +L GELF L + SE E R + L++V+ H++
Sbjct: 85 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN 144
Query: 163 VVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLA----- 217
+VHRDLKPENILL + IKL DFG + ++PG+ L G+P Y+APE++
Sbjct: 145 IVHRDLKPENILLDDDMN---IKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMND 201
Query: 218 --GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
GY + D+WS GVI+Y LL+G PPFW + + + + + +F S WD SD+ K
Sbjct: 202 NHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVK 261
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSWM 301
DLV L P +R TA + L H +
Sbjct: 262 DLVSRFLVVQPQKRYTAEEALAHPFF 287
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/273 (38%), Positives = 149/273 (54%), Gaps = 14/273 (5%)
Query: 38 NLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL------VTIDD-ERSVKL 90
N+ + + G++LG G+F V++ C +K TG +A K I K R V+ +D ER V +
Sbjct: 8 NVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQ 150
EI HPNV+ L VYE++ V L++EL AGGELF L + +E EA Q
Sbjct: 68 LKEIQ-----HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLATKASSSP-IKLADFGLATYIEPGQSLLGTVGSPF 209
++ V Y H + + H DLKPENI+L + P IK+ DFGLA I+ G G+P
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 210 YIAPEVLAGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWD 268
++APE++ AD+WS GVI YILLSG PF G+TK V + F +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 269 HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
+ S AKD + +L DP +R+T + L H W+
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/273 (38%), Positives = 148/273 (54%), Gaps = 14/273 (5%)
Query: 38 NLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL------VTIDD-ERSVKL 90
N+ + + G++LG GQF V++ C +K TG +A K I K R V+ +D ER V +
Sbjct: 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQ 150
EI HPNV+ L VYE++ V L+ EL AGGELF L + +E EA Q
Sbjct: 68 LKEIQ-----HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLATKASSSP-IKLADFGLATYIEPGQSLLGTVGSPF 209
++ V Y H + + H DLKPENI+L + P IK+ DFGLA I+ G G+P
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 210 YIAPEVL-AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWD 268
++APE++ AD+WS GVI YILLSG PF G+TK V + F +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 269 HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
+ S AKD + +L DP +R+T + L H W+
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/266 (37%), Positives = 144/266 (54%), Gaps = 16/266 (6%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKL------EIEIMTRLSGHP 102
LG G V+R C K T + +A K I + E +L E++I+ ++SGHP
Sbjct: 25 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 84
Query: 103 NVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIG 162
N++ LK YE + LV +L GELF L + SE E R + L++V+ H++
Sbjct: 85 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN 144
Query: 163 VVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLA----- 217
+VHRDLKPENILL + IKL DFG + ++PG+ L G+P Y+APE++
Sbjct: 145 IVHRDLKPENILLDDDMN---IKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMND 201
Query: 218 --GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
GY + D+WS GVI+Y LL+G PPFW + + + + + +F S WD SD+ K
Sbjct: 202 NHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVK 261
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSWM 301
DLV L P +R TA + L H +
Sbjct: 262 DLVSRFLVVQPQKRYTAEEALAHPFF 287
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/266 (37%), Positives = 144/266 (54%), Gaps = 16/266 (6%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKL------EIEIMTRLSGHP 102
LG G V+R C K T + +A K I + E +L E++I+ ++SGHP
Sbjct: 12 LGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHP 71
Query: 103 NVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIG 162
N++ LK YE + LV +L GELF L + SE E R + L++V+ H++
Sbjct: 72 NIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLN 131
Query: 163 VVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLA----- 217
+VHRDLKPENILL + IKL DFG + ++PG+ L G+P Y+APE++
Sbjct: 132 IVHRDLKPENILLDDDMN---IKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMND 188
Query: 218 --GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
GY + D+WS GVI+Y LL+G PPFW + + + + + +F S WD SD+ K
Sbjct: 189 NHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVK 248
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSWM 301
DLV L P +R TA + L H +
Sbjct: 249 DLVSRFLVVQPQKRYTAEEALAHPFF 274
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 149/273 (54%), Gaps = 13/273 (4%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHP 102
+V+ + +G G + + C K T +A K I K + R EIEI+ R HP
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK-------RDPSEEIEILLRYGQHP 81
Query: 103 NVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIG 162
N++ LK VY+D +V+LV EL GGEL ++ + FSE EA + + + V Y H G
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG 141
Query: 163 VVHRDLKPENILLATKASSSP-IKLADFGLATYIEPGQSLLGT-VGSPFYIAPEVLA-GG 219
VVHRDLKP NIL ++ + +++ DFG A + LL T + ++APEVL G
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQG 201
Query: 220 YNQAADVWSAGVILYILLSGMPPFWG---NTKSRIFDAVRTADLRFPSNPWDHISDSAKD 276
Y++ D+WS G++LY +L+G PF +T I + + W+ +S++AKD
Sbjct: 202 YDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKD 261
Query: 277 LVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPE 309
LV ML DP QRLTA+QVL H W+ + P+
Sbjct: 262 LVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQ 294
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 179 bits (454), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 149/273 (54%), Gaps = 13/273 (4%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHP 102
+V+ + +G G + + C K T +A K I K + R EIEI+ R HP
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK-------RDPSEEIEILLRYGQHP 81
Query: 103 NVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIG 162
N++ LK VY+D +V+LV EL GGEL ++ + FSE EA + + + V Y H G
Sbjct: 82 NIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQG 141
Query: 163 VVHRDLKPENILLATKASSSP-IKLADFGLATYIEPGQSLLGT-VGSPFYIAPEVLA-GG 219
VVHRDLKP NIL ++ + +++ DFG A + LL T + ++APEVL G
Sbjct: 142 VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQG 201
Query: 220 YNQAADVWSAGVILYILLSGMPPFWG---NTKSRIFDAVRTADLRFPSNPWDHISDSAKD 276
Y++ D+WS G++LY +L+G PF +T I + + W+ +S++AKD
Sbjct: 202 YDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKD 261
Query: 277 LVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPE 309
LV ML DP QRLTA+QVL H W+ + P+
Sbjct: 262 LVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQ 294
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/302 (36%), Positives = 155/302 (51%), Gaps = 15/302 (4%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHP 102
+ + + +G G + V + C K T FA K I K + R EIEI+ R HP
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSK-------RDPTEEIEILLRYGQHP 76
Query: 103 NVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIG 162
N++ LK VY+D YV++V EL GGEL ++ + FSE EA + + + V Y H G
Sbjct: 77 NIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQG 136
Query: 163 VVHRDLKPENILLATKASS-SPIKLADFGLATYIEPGQSLLGT-VGSPFYIAPEVLA-GG 219
VVHRDLKP NIL ++ + I++ DFG A + LL T + ++APEVL G
Sbjct: 137 VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQG 196
Query: 220 YNQAADVWSAGVILYILLSGMPPFWG---NTKSRIFDAVRTADLRFPSNPWDHISDSAKD 276
Y+ A D+WS GV+LY L+G PF +T I + + W+ +SD+AKD
Sbjct: 197 YDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKD 256
Query: 277 LVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPEKLSGNKIEDCKEWDLGSGSFSTQIIPR 336
LV L DP QRLTA VL H W+ Q P+ +D G+ + + + R
Sbjct: 257 LVSKXLHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNR--QDAPHLVKGAXAATYSALNR 314
Query: 337 NQ 338
NQ
Sbjct: 315 NQ 316
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 158/270 (58%), Gaps = 12/270 (4%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI-MTRLSGH 101
+ L + +G G F V+R C ++ TG+ FA K + + + + L+ E + + H
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 102 PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGR----FSEAEARVLFMQLMQVVLY 157
P++V+L Y + +++V E G +L + K +SEA A Q+++ + Y
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 147
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLL---GTVGSPFYIAPE 214
CH+ ++HRD+KP +LLA+K +S+P+KL FG+A I+ G+S L G VG+P ++APE
Sbjct: 148 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA--IQLGESGLVAGGRVGTPHFMAPE 205
Query: 215 VLAGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDS 273
V+ Y + DVW GVIL+ILLSG PF+G TK R+F+ + + W HIS+S
Sbjct: 206 VVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISES 264
Query: 274 AKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
AKDLV ML DP++R+T + L+H W+ +
Sbjct: 265 AKDLVRRMLMLDPAERITVYEALNHPWLKE 294
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 178 bits (452), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 105/273 (38%), Positives = 148/273 (54%), Gaps = 14/273 (5%)
Query: 38 NLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL------VTIDD-ERSVKL 90
N+ + + G++LG G F V++ C +K TG +A K I K R V+ +D ER V +
Sbjct: 8 NVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSI 67
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQ 150
EI HPNV+ L VYE++ V L++EL AGGELF L + +E EA Q
Sbjct: 68 LKEIQ-----HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQ 122
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLATKASSSP-IKLADFGLATYIEPGQSLLGTVGSPF 209
++ V Y H + + H DLKPENI+L + P IK+ DFGLA I+ G G+P
Sbjct: 123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPE 182
Query: 210 YIAPEVL-AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWD 268
++APE++ AD+WS GVI YILLSG PF G+TK V + F +
Sbjct: 183 FVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 242
Query: 269 HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
+ S AKD + +L DP +R+T + L H W+
Sbjct: 243 NTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 178 bits (451), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 145/264 (54%), Gaps = 15/264 (5%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACK--SIAKDRLV--TIDDER-SVKLEIEIMTRLSGHPN 103
+G G V+R C + TG FA K + +RL +++ R + + E I+ +++GHP+
Sbjct: 102 IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPH 161
Query: 104 VVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGV 163
++ L YE ++ LV +L GELF L + SE E R + L++ V + H +
Sbjct: 162 IITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNI 221
Query: 164 VHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLA------ 217
VHRDLKPENILL I+L+DFG + ++EPG+ L G+P Y+APE+L
Sbjct: 222 VHRDLKPENILLDDNMQ---IRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDET 278
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKD 276
GY + D+W+ GVIL+ LL+G PPFW + + + +F S WD S + KD
Sbjct: 279 HPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKD 338
Query: 277 LVMGMLSTDPSQRLTARQVLDHSW 300
L+ +L DP RLTA Q L H +
Sbjct: 339 LISRLLQVDPEARLTAEQALQHPF 362
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 178 bits (451), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 99/270 (36%), Positives = 158/270 (58%), Gaps = 12/270 (4%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI-MTRLSGH 101
+ L + +G G F V+R C ++ TG+ FA K + + + + L+ E + + H
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 102 PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGR----FSEAEARVLFMQLMQVVLY 157
P++V+L Y + +++V E G +L + K +SEA A Q+++ + Y
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRY 145
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLL---GTVGSPFYIAPE 214
CH+ ++HRD+KP +LLA+K +S+P+KL FG+A I+ G+S L G VG+P ++APE
Sbjct: 146 CHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA--IQLGESGLVAGGRVGTPHFMAPE 203
Query: 215 VLAGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDS 273
V+ Y + DVW GVIL+ILLSG PF+G TK R+F+ + + W HIS+S
Sbjct: 204 VVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISES 262
Query: 274 AKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
AKDLV ML DP++R+T + L+H W+ +
Sbjct: 263 AKDLVRRMLMLDPAERITVYEALNHPWLKE 292
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/262 (37%), Positives = 144/262 (54%), Gaps = 10/262 (3%)
Query: 42 RFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH 101
+VLG LG G FG +++ + TG A K + + ++ ++D +K EI+ + +L H
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNL-KLFRH 70
Query: 102 PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEI 161
P+++ L V +VME +GGELF + K GR E EAR LF Q++ V YCH
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 162 GVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGGYN 221
VVHRDLKPEN+LL ++ K+ADFGL+ + G+ L + GSP Y APEV++G
Sbjct: 131 MVVHRDLKPENVLLDAHMNA---KIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLY 187
Query: 222 QA--ADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
D+WS GVILY LL G PF +F +R P ++++ S L+M
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP----EYLNRSVATLLM 243
Query: 280 GMLSTDPSQRLTARQVLDHSWM 301
ML DP +R T + + +H W
Sbjct: 244 HMLQVDPLKRATIKDIREHEWF 265
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 175 bits (444), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 144/261 (55%), Gaps = 10/261 (3%)
Query: 42 RFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH 101
+VLG LG G FG +++ + TG A K + + ++ ++D +K EI+ + +L H
Sbjct: 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNL-KLFRH 70
Query: 102 PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEI 161
P+++ L V +VME +GGELF + K GR E EAR LF Q++ V YCH
Sbjct: 71 PHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH 130
Query: 162 GVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGGYN 221
VVHRDLKPEN+LL ++ K+ADFGL+ + G+ L + GSP Y APEV++G
Sbjct: 131 MVVHRDLKPENVLLDAHMNA---KIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLY 187
Query: 222 QA--ADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
D+WS GVILY LL G PF +F +R P ++++ S L+M
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP----EYLNRSVATLLM 243
Query: 280 GMLSTDPSQRLTARQVLDHSW 300
ML DP +R T + + +H W
Sbjct: 244 HMLQVDPLKRATIKDIREHEW 264
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/268 (35%), Positives = 152/268 (56%), Gaps = 11/268 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+ + + ++LG G FGV+ +++ TG FA K + D+ +V+ EI+ M+ L
Sbjct: 51 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE---SDKETVRKEIQTMSVLR- 106
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRL-EKFGRFSEAEARVLFMQLMQVVLYCH 159
HP +V+L +ED++ + ++ E +GGELF ++ ++ + SE EA Q+ + + + H
Sbjct: 107 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 166
Query: 160 EIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAG- 218
E VH DLKPENI+ TK S+ +KL DFGL +++P QS+ T G+ + APEV G
Sbjct: 167 ENNYVHLDLKPENIMFTTKRSNE-LKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGK 225
Query: 219 --GYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKD 276
GY D+WS GV+ YILLSG+ PF G V++ D + + IS+ KD
Sbjct: 226 PVGY--YTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKD 283
Query: 277 LVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ +L DP+ R+T Q L+H W+ G
Sbjct: 284 FIRKLLLADPNTRMTIHQALEHPWLTPG 311
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/268 (35%), Positives = 152/268 (56%), Gaps = 11/268 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+ + + ++LG G FGV+ +++ TG FA K + D+ +V+ EI+ M+ L
Sbjct: 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHE---SDKETVRKEIQTMSVLR- 212
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRL-EKFGRFSEAEARVLFMQLMQVVLYCH 159
HP +V+L +ED++ + ++ E +GGELF ++ ++ + SE EA Q+ + + + H
Sbjct: 213 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 272
Query: 160 EIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAG- 218
E VH DLKPENI+ TK S+ +KL DFGL +++P QS+ T G+ + APEV G
Sbjct: 273 ENNYVHLDLKPENIMFTTKRSNE-LKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGK 331
Query: 219 --GYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKD 276
GY D+WS GV+ YILLSG+ PF G V++ D + + IS+ KD
Sbjct: 332 PVGY--YTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKD 389
Query: 277 LVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ +L DP+ R+T Q L+H W+ G
Sbjct: 390 FIRKLLLADPNTRMTIHQALEHPWLTPG 417
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 171 bits (432), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/266 (38%), Positives = 145/266 (54%), Gaps = 14/266 (5%)
Query: 45 LGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKD------RLVTIDD-ERSVKLEIEIMTR 97
+G++LG GQF +++ C +K TG +A K I K R V+ ++ ER V + +++
Sbjct: 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL-- 73
Query: 98 LSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLY 157
H NV+ L VYE+ V L++EL +GGELF L + SE EA Q++ V Y
Sbjct: 74 ---HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 158 CHEIGVVHRDLKPENILLATKASSSP-IKLADFGLATYIEPGQSLLGTVGSPFYIAPEVL 216
H + H DLKPENI+L K P IKL DFGLA IE G G+P ++APE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 217 AGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
AD+WS GVI YILLSG PF G+TK + + F + H S+ AK
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAK 250
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSWM 301
D + +L + +RLT ++ L H W+
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/277 (36%), Positives = 150/277 (54%), Gaps = 8/277 (2%)
Query: 31 LDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSV-- 88
++T + + + + +G++LG GQF +++ C +K TG +A K I K + + R V
Sbjct: 2 METFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQ--SRASRRGVCR 59
Query: 89 -KLEIEI-MTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARV 146
++E E+ + R HPN++ L VYE+ V L++EL +GGELF L + SE EA
Sbjct: 60 EEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATS 119
Query: 147 LFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSP-IKLADFGLATYIEPGQSLLGTV 205
Q++ V Y H + H DLKPENI+L K P IKL DFGLA IE G
Sbjct: 120 FIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIF 179
Query: 206 GSPFYIAPEVLAGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPS 264
G+P ++APE++ AD+WS GVI YILLSG PF G+TK + F
Sbjct: 180 GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDE 239
Query: 265 NPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
+ S+ AKD + +L + +RLT ++ L H W+
Sbjct: 240 EFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/266 (38%), Positives = 145/266 (54%), Gaps = 14/266 (5%)
Query: 45 LGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKD------RLVTIDD-ERSVKLEIEIMTR 97
+G++LG GQF +++ C +K TG +A K I K R V+ ++ ER V + +++
Sbjct: 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL-- 73
Query: 98 LSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLY 157
H NV+ L VYE+ V L++EL +GGELF L + SE EA Q++ V Y
Sbjct: 74 ---HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 158 CHEIGVVHRDLKPENILLATKASSSP-IKLADFGLATYIEPGQSLLGTVGSPFYIAPEVL 216
H + H DLKPENI+L K P IKL DFGLA IE G G+P ++APE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 217 AGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
AD+WS GVI YILLSG PF G+TK + + F + H S+ AK
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAK 250
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSWM 301
D + +L + +RLT ++ L H W+
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/266 (38%), Positives = 145/266 (54%), Gaps = 14/266 (5%)
Query: 45 LGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKD------RLVTIDD-ERSVKLEIEIMTR 97
+G++LG GQF +++ C +K TG +A K I K R V+ ++ ER V + +++
Sbjct: 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL-- 73
Query: 98 LSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLY 157
H NV+ L VYE+ V L++EL +GGELF L + SE EA Q++ V Y
Sbjct: 74 ---HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 158 CHEIGVVHRDLKPENILLATKASSSP-IKLADFGLATYIEPGQSLLGTVGSPFYIAPEVL 216
H + H DLKPENI+L K P IKL DFGLA IE G G+P ++APE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 217 AGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
AD+WS GVI YILLSG PF G+TK + + F + H S+ AK
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAK 250
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSWM 301
D + +L + +RLT ++ L H W+
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 157/298 (52%), Gaps = 30/298 (10%)
Query: 44 VLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPN 103
V Q LG G G + +K T E FA K + D + E+E+ R S P+
Sbjct: 65 VTSQVLGLGINGKVLQIFNKRTQEKFALK--------MLQDCPKARREVELHWRASQCPH 116
Query: 104 VVDLKAVYED----EDYVHLVMELCAGGELFHRLEKFG--RFSEAEARVLFMQLMQVVLY 157
+V + VYE+ + +VME GGELF R++ G F+E EA + + + + Y
Sbjct: 117 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 176
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLA 217
H I + HRD+KPEN+L +K ++ +KL DFG A SL +P+Y+APEVL
Sbjct: 177 LHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLG 236
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGN--------TKSRIFDAVRTADLRFPSNPWD 268
Y+++ D+WS GVI+YILL G PPF+ N K+RI R FP+ W
Sbjct: 237 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI----RMGQYEFPNPEWS 292
Query: 269 HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPEK-LSGNKI--EDCKEWD 323
+S+ K L+ +L T+P+QR+T + ++H W+ + P+ L +++ ED + W+
Sbjct: 293 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWE 350
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 157/298 (52%), Gaps = 30/298 (10%)
Query: 44 VLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPN 103
V Q LG G G + +K T E FA K + D + E+E+ R S P+
Sbjct: 71 VTSQVLGLGINGKVLQIFNKRTQEKFALK--------MLQDCPKARREVELHWRASQCPH 122
Query: 104 VVDLKAVYED----EDYVHLVMELCAGGELFHRLEKFG--RFSEAEARVLFMQLMQVVLY 157
+V + VYE+ + +VME GGELF R++ G F+E EA + + + + Y
Sbjct: 123 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 182
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLA 217
H I + HRD+KPEN+L +K ++ +KL DFG A SL +P+Y+APEVL
Sbjct: 183 LHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLG 242
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGN--------TKSRIFDAVRTADLRFPSNPWD 268
Y+++ D+WS GVI+YILL G PPF+ N K+RI R FP+ W
Sbjct: 243 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI----RMGQYEFPNPEWS 298
Query: 269 HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPEK-LSGNKI--EDCKEWD 323
+S+ K L+ +L T+P+QR+T + ++H W+ + P+ L +++ ED + W+
Sbjct: 299 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWE 356
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 157/298 (52%), Gaps = 30/298 (10%)
Query: 44 VLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPN 103
V Q LG G G + +K T E FA K + D + E+E+ R S P+
Sbjct: 25 VTSQVLGLGINGKVLQIFNKRTQEKFALK--------MLQDCPKARREVELHWRASQCPH 76
Query: 104 VVDLKAVYED----EDYVHLVMELCAGGELFHRLEKFG--RFSEAEARVLFMQLMQVVLY 157
+V + VYE+ + +VME GGELF R++ G F+E EA + + + + Y
Sbjct: 77 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 136
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLA 217
H I + HRD+KPEN+L +K ++ +KL DFG A SL +P+Y+APEVL
Sbjct: 137 LHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLG 196
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGN--------TKSRIFDAVRTADLRFPSNPWD 268
Y+++ D+WS GVI+YILL G PPF+ N K+RI R FP+ W
Sbjct: 197 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI----RMGQYEFPNPEWS 252
Query: 269 HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPEK-LSGNKI--EDCKEWD 323
+S+ K L+ +L T+P+QR+T + ++H W+ + P+ L +++ ED + W+
Sbjct: 253 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWE 310
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 157/298 (52%), Gaps = 30/298 (10%)
Query: 44 VLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPN 103
V Q LG G G + +K T E FA K + D + E+E+ R S P+
Sbjct: 26 VTSQVLGLGINGKVLQIFNKRTQEKFALK--------MLQDCPKARREVELHWRASQCPH 77
Query: 104 VVDLKAVYED----EDYVHLVMELCAGGELFHRLEKFG--RFSEAEARVLFMQLMQVVLY 157
+V + VYE+ + +VME GGELF R++ G F+E EA + + + + Y
Sbjct: 78 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 137
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLA 217
H I + HRD+KPEN+L +K ++ +KL DFG A SL +P+Y+APEVL
Sbjct: 138 LHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLG 197
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGN--------TKSRIFDAVRTADLRFPSNPWD 268
Y+++ D+WS GVI+YILL G PPF+ N K+RI R FP+ W
Sbjct: 198 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI----RMGQYEFPNPEWS 253
Query: 269 HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPEK-LSGNKI--EDCKEWD 323
+S+ K L+ +L T+P+QR+T + ++H W+ + P+ L +++ ED + W+
Sbjct: 254 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWE 311
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 157/298 (52%), Gaps = 30/298 (10%)
Query: 44 VLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPN 103
V Q LG G G + +K T E FA K + D + E+E+ R S P+
Sbjct: 19 VTSQVLGLGINGKVLQIFNKRTQEKFALK--------MLQDCPKARREVELHWRASQCPH 70
Query: 104 VVDLKAVYED----EDYVHLVMELCAGGELFHRLEKFG--RFSEAEARVLFMQLMQVVLY 157
+V + VYE+ + +VME GGELF R++ G F+E EA + + + + Y
Sbjct: 71 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 130
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLA 217
H I + HRD+KPEN+L +K ++ +KL DFG A SL +P+Y+APEVL
Sbjct: 131 LHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLG 190
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGN--------TKSRIFDAVRTADLRFPSNPWD 268
Y+++ D+WS GVI+YILL G PPF+ N K+RI R FP+ W
Sbjct: 191 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI----RMGQYEFPNPEWS 246
Query: 269 HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPEK-LSGNKI--EDCKEWD 323
+S+ K L+ +L T+P+QR+T + ++H W+ + P+ L +++ ED + W+
Sbjct: 247 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWE 304
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 157/298 (52%), Gaps = 30/298 (10%)
Query: 44 VLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPN 103
V Q LG G G + +K T E FA K + D + E+E+ R S P+
Sbjct: 20 VTSQVLGLGINGKVLQIFNKRTQEKFALK--------MLQDCPKARREVELHWRASQCPH 71
Query: 104 VVDLKAVYED----EDYVHLVMELCAGGELFHRLEKFG--RFSEAEARVLFMQLMQVVLY 157
+V + VYE+ + +VME GGELF R++ G F+E EA + + + + Y
Sbjct: 72 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 131
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLA 217
H I + HRD+KPEN+L +K ++ +KL DFG A SL +P+Y+APEVL
Sbjct: 132 LHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLG 191
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGN--------TKSRIFDAVRTADLRFPSNPWD 268
Y+++ D+WS GVI+YILL G PPF+ N K+RI R FP+ W
Sbjct: 192 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI----RMGQYEFPNPEWS 247
Query: 269 HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPEK-LSGNKI--EDCKEWD 323
+S+ K L+ +L T+P+QR+T + ++H W+ + P+ L +++ ED + W+
Sbjct: 248 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWE 305
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 157/298 (52%), Gaps = 30/298 (10%)
Query: 44 VLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPN 103
V Q LG G G + +K T E FA K + D + E+E+ R S P+
Sbjct: 21 VTSQVLGLGINGKVLQIFNKRTQEKFALK--------MLQDCPKARREVELHWRASQCPH 72
Query: 104 VVDLKAVYED----EDYVHLVMELCAGGELFHRLEKFG--RFSEAEARVLFMQLMQVVLY 157
+V + VYE+ + +VME GGELF R++ G F+E EA + + + + Y
Sbjct: 73 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 132
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLA 217
H I + HRD+KPEN+L +K ++ +KL DFG A SL +P+Y+APEVL
Sbjct: 133 LHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLG 192
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGN--------TKSRIFDAVRTADLRFPSNPWD 268
Y+++ D+WS GVI+YILL G PPF+ N K+RI R FP+ W
Sbjct: 193 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI----RMGQYEFPNPEWS 248
Query: 269 HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPEK-LSGNKI--EDCKEWD 323
+S+ K L+ +L T+P+QR+T + ++H W+ + P+ L +++ ED + W+
Sbjct: 249 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWE 306
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 157/298 (52%), Gaps = 30/298 (10%)
Query: 44 VLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPN 103
V Q LG G G + +K T E FA K + D + E+E+ R S P+
Sbjct: 27 VTSQVLGLGINGKVLQIFNKRTQEKFALK--------MLQDCPKARREVELHWRASQCPH 78
Query: 104 VVDLKAVYED----EDYVHLVMELCAGGELFHRLEKFG--RFSEAEARVLFMQLMQVVLY 157
+V + VYE+ + +VME GGELF R++ G F+E EA + + + + Y
Sbjct: 79 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 138
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLA 217
H I + HRD+KPEN+L +K ++ +KL DFG A SL +P+Y+APEVL
Sbjct: 139 LHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLG 198
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGN--------TKSRIFDAVRTADLRFPSNPWD 268
Y+++ D+WS GVI+YILL G PPF+ N K+RI R FP+ W
Sbjct: 199 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI----RMGQYEFPNPEWS 254
Query: 269 HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPEK-LSGNKI--EDCKEWD 323
+S+ K L+ +L T+P+QR+T + ++H W+ + P+ L +++ ED + W+
Sbjct: 255 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWE 312
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 157/298 (52%), Gaps = 30/298 (10%)
Query: 44 VLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPN 103
V Q LG G G + +K T E FA K + D + E+E+ R S P+
Sbjct: 21 VTSQVLGLGINGKVLQIFNKRTQEKFALK--------MLQDCPKARREVELHWRASQCPH 72
Query: 104 VVDLKAVYED----EDYVHLVMELCAGGELFHRLEKFG--RFSEAEARVLFMQLMQVVLY 157
+V + VYE+ + +VME GGELF R++ G F+E EA + + + + Y
Sbjct: 73 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 132
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLA 217
H I + HRD+KPEN+L +K ++ +KL DFG A SL +P+Y+APEVL
Sbjct: 133 LHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLG 192
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGN--------TKSRIFDAVRTADLRFPSNPWD 268
Y+++ D+WS GVI+YILL G PPF+ N K+RI R FP+ W
Sbjct: 193 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI----RMGQYEFPNPEWS 248
Query: 269 HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPEK-LSGNKI--EDCKEWD 323
+S+ K L+ +L T+P+QR+T + ++H W+ + P+ L +++ ED + W+
Sbjct: 249 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWE 306
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 157/298 (52%), Gaps = 30/298 (10%)
Query: 44 VLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPN 103
V Q LG G G + +K T E FA K + D + E+E+ R S P+
Sbjct: 35 VTSQVLGLGINGKVLQIFNKRTQEKFALK--------MLQDCPKARREVELHWRASQCPH 86
Query: 104 VVDLKAVYED----EDYVHLVMELCAGGELFHRLEKFG--RFSEAEARVLFMQLMQVVLY 157
+V + VYE+ + +VME GGELF R++ G F+E EA + + + + Y
Sbjct: 87 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 146
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLA 217
H I + HRD+KPEN+L +K ++ +KL DFG A SL +P+Y+APEVL
Sbjct: 147 LHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLG 206
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGN--------TKSRIFDAVRTADLRFPSNPWD 268
Y+++ D+WS GVI+YILL G PPF+ N K+RI R FP+ W
Sbjct: 207 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI----RMGQYEFPNPEWS 262
Query: 269 HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPEK-LSGNKI--EDCKEWD 323
+S+ K L+ +L T+P+QR+T + ++H W+ + P+ L +++ ED + W+
Sbjct: 263 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWE 320
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 168 bits (425), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 157/298 (52%), Gaps = 30/298 (10%)
Query: 44 VLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPN 103
V Q LG G G + +K T E FA K + D + E+E+ R S P+
Sbjct: 19 VTSQVLGLGINGKVLQIFNKRTQEKFALK--------MLQDCPKARREVELHWRASQCPH 70
Query: 104 VVDLKAVYED----EDYVHLVMELCAGGELFHRLEKFG--RFSEAEARVLFMQLMQVVLY 157
+V + VYE+ + +VME GGELF R++ G F+E EA + + + + Y
Sbjct: 71 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 130
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLA 217
H I + HRD+KPEN+L +K ++ +KL DFG A SL +P+Y+APEVL
Sbjct: 131 LHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLG 190
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGN--------TKSRIFDAVRTADLRFPSNPWD 268
Y+++ D+WS GVI+YILL G PPF+ N K+RI R FP+ W
Sbjct: 191 PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI----RMGQYEFPNPEWS 246
Query: 269 HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPEK-LSGNKI--EDCKEWD 323
+S+ K L+ +L T+P+QR+T + ++H W+ + P+ L +++ ED + W+
Sbjct: 247 EVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWE 304
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 168 bits (425), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 95/261 (36%), Positives = 144/261 (55%), Gaps = 10/261 (3%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHP 102
++LG LG G FG ++V + TG A K + + ++ ++D ++ EI+ + +L HP
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNL-KLFRHP 76
Query: 103 NVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIG 162
+++ L V + +VME +GGELF + K GR E E+R LF Q++ V YCH
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM 136
Query: 163 VVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGGYNQ 222
VVHRDLKPEN+LL ++ K+ADFGL+ + G+ L + GSP Y APEV++G
Sbjct: 137 VVHRDLKPENVLLDAHMNA---KIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYA 193
Query: 223 A--ADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMG 280
D+WS+GVILY LL G PF + +F + P +++ S L+
Sbjct: 194 GPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQ----YLNPSVISLLKH 249
Query: 281 MLSTDPSQRLTARQVLDHSWM 301
ML DP +R T + + +H W
Sbjct: 250 MLQVDPMKRATIKDIREHEWF 270
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 144/269 (53%), Gaps = 10/269 (3%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +G+ LG G+FG + + +K + + A K + K +L E ++ E+EI + L
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 71
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + D V+L++E GE++ L+K +F E +L + YCH
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG- 219
V+HRD+KPEN+LL S+ +K+ADFG + + P G+ Y+ PE++ G
Sbjct: 132 KRVIHRDIKPENLLL---GSAGELKIADFGWSVHA-PSSRRTTLCGTLDYLPPEMIEGRM 187
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+++ D+WS GV+ Y L G PPF NT + + + FP D +++ A+DL+
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 243
Query: 280 GMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+L +PSQR R+VL+H W+ P
Sbjct: 244 RLLKHNPSQRPMLREVLEHPWITANSSKP 272
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 144/269 (53%), Gaps = 10/269 (3%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +G+ LG G+FG + + +K + + A K + K +L E ++ E+EI + L
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 71
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + D V+L++E GE++ L+K +F E +L + YCH
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG- 219
V+HRD+KPEN+LL S+ +K+ADFG + + P G+ Y+ PE++ G
Sbjct: 132 KRVIHRDIKPENLLL---GSAGELKIADFGWSVHA-PSSRRXXLXGTLDYLPPEMIEGRM 187
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+++ D+WS GV+ Y L G PPF NT + + + FP D +++ A+DL+
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 243
Query: 280 GMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+L +PSQR R+VL+H W+ P
Sbjct: 244 RLLKHNPSQRPMLREVLEHPWITANSSKP 272
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 143/266 (53%), Gaps = 14/266 (5%)
Query: 45 LGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKD------RLVTIDD-ERSVKLEIEIMTR 97
+G++LG GQF +++ C +K TG +A K I K R V+ ++ ER V + +++
Sbjct: 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL-- 73
Query: 98 LSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLY 157
H NV+ L VYE+ V L++EL +GGELF L + SE EA Q++ V Y
Sbjct: 74 ---HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 158 CHEIGVVHRDLKPENILLATKASSSP-IKLADFGLATYIEPGQSLLGTVGSPFYIAPEVL 216
H + H DLKPENI+L K P IKL DFGLA IE G G+P ++APE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 217 AGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
AD+WS GVI YILLSG PF G+TK + F + S+ AK
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAK 250
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSWM 301
D + +L + +RLT ++ L H W+
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 143/266 (53%), Gaps = 14/266 (5%)
Query: 45 LGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKD------RLVTIDD-ERSVKLEIEIMTR 97
+G++LG GQF +++ C +K TG +A K I K R V+ ++ ER V + +++
Sbjct: 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL-- 73
Query: 98 LSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLY 157
H NV+ L VYE+ V L++EL +GGELF L + SE EA Q++ V Y
Sbjct: 74 ---HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNY 130
Query: 158 CHEIGVVHRDLKPENILLATKASSSP-IKLADFGLATYIEPGQSLLGTVGSPFYIAPEVL 216
H + H DLKPENI+L K P IKL DFGLA IE G G+P ++APE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 217 AGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
AD+WS GVI YILLSG PF G+TK + F + S+ AK
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAK 250
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSWM 301
D + +L + +RLT ++ L H W+
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 166 bits (420), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 144/260 (55%), Gaps = 10/260 (3%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHP 102
F +G+ LG G+FG + + +K + A K + K +L E ++ EIEI + L HP
Sbjct: 17 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HP 75
Query: 103 NVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIG 162
N++ + + D ++L++E GEL+ L+K GRF E + +L + YCHE
Sbjct: 76 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 135
Query: 163 VVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG-YN 221
V+HRD+KPEN+L+ K +K+ADFG + + P G+ Y+ PE++ G ++
Sbjct: 136 VIHRDIKPENLLMGYKGE---LKIADFGWSVHA-PSLRRRXMCGTLDYLPPEMIEGKTHD 191
Query: 222 QAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGM 281
+ D+W AGV+ Y L GMPPF + + + DL+FP P+ +SD +KDL+ +
Sbjct: 192 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP--PF--LSDGSKDLISKL 247
Query: 282 LSTDPSQRLTARQVLDHSWM 301
L P QRL + V++H W+
Sbjct: 248 LRYHPPQRLPLKGVMEHPWV 267
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/260 (34%), Positives = 144/260 (55%), Gaps = 10/260 (3%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHP 102
F +G+ LG G+FG + + +K + A K + K +L E ++ EIEI + L HP
Sbjct: 16 FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HP 74
Query: 103 NVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIG 162
N++ + + D ++L++E GEL+ L+K GRF E + +L + YCHE
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 134
Query: 163 VVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG-YN 221
V+HRD+KPEN+L+ K +K+ADFG + + P G+ Y+ PE++ G ++
Sbjct: 135 VIHRDIKPENLLMGYKGE---LKIADFGWSVHA-PSLRRRXMCGTLDYLPPEMIEGKTHD 190
Query: 222 QAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGM 281
+ D+W AGV+ Y L GMPPF + + + DL+FP P+ +SD +KDL+ +
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP--PF--LSDGSKDLISKL 246
Query: 282 LSTDPSQRLTARQVLDHSWM 301
L P QRL + V++H W+
Sbjct: 247 LRYHPPQRLPLKGVMEHPWV 266
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 143/269 (53%), Gaps = 10/269 (3%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +G+ LG G+FG + + +K + + A K + K +L E ++ E+EI + L
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 92
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + D V+L++E G ++ L+K +F E +L + YCH
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 152
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG- 219
V+HRD+KPEN+LL S+ +K+ADFG + + P G+ Y+ PE++ G
Sbjct: 153 KRVIHRDIKPENLLL---GSAGELKIADFGWSVHA-PSSRRTTLCGTLDYLPPEMIEGRM 208
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+++ D+WS GV+ Y L G PPF NT + + + FP D +++ A+DL+
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 264
Query: 280 GMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+L +PSQR R+VL+H W+ P
Sbjct: 265 RLLKHNPSQRPMLREVLEHPWITANSSKP 293
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 143/269 (53%), Gaps = 10/269 (3%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +G+ LG G+FG + + +K + + A K + K +L E ++ E+EI + L
Sbjct: 25 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 83
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + D V+L++E G ++ L+K +F E +L + YCH
Sbjct: 84 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 143
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG- 219
V+HRD+KPEN+LL S+ +K+ADFG + + P G+ Y+ PE++ G
Sbjct: 144 KRVIHRDIKPENLLL---GSAGELKIADFGWSVHA-PSSRRTTLCGTLDYLPPEMIEGRM 199
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+++ D+WS GV+ Y L G PPF NT + + + FP D +++ A+DL+
Sbjct: 200 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 255
Query: 280 GMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+L +PSQR R+VL+H W+ P
Sbjct: 256 RLLKHNPSQRPMLREVLEHPWITANSSKP 284
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 96/261 (36%), Positives = 147/261 (56%), Gaps = 15/261 (5%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
++LG G FGV+ C +K TG VF K I + D+ +VK EI IM +L HP +++
Sbjct: 57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPL---DKYTVKNEISIMNQLH-HPKLIN 112
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRL--EKFGRFSEAEARVLFMQLMQVVLYCHEIGVV 164
L +ED+ + L++E +GGELF R+ E + + SEAE Q + + + HE +V
Sbjct: 113 LHDAFEDKYEMVLILEFLSGGELFDRIAAEDY-KMSEAEVINYMRQACEGLKHMHEHSIV 171
Query: 165 HRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVL----AGGY 220
H D+KPENI+ TK +SS +K+ DFGLAT + P + + T + + APE++ G Y
Sbjct: 172 HLDIKPENIMCETKKASS-VKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFY 230
Query: 221 NQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMG 280
D+W+ GV+ Y+LLSG+ PF G V+ D F + + +S AKD +
Sbjct: 231 ---TDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKN 287
Query: 281 MLSTDPSQRLTARQVLDHSWM 301
+L +P +RLT L+H W+
Sbjct: 288 LLQKEPRKRLTVHDALEHPWL 308
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 165 bits (417), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 102/265 (38%), Positives = 147/265 (55%), Gaps = 12/265 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ L + +G G FGV R+ DK + E+ A K I + + + +VK EI I R
Sbjct: 18 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKI----DENVKREI-INHRSLR 72
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN+V K V ++ +VME +GGELF R+ GRFSE EAR F QL+ V YCH
Sbjct: 73 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 132
Query: 161 IGVVHRDLKPENILLATKASSSP-IKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG 219
+ V HRDLK EN LL S +P +K+ DFG + TVG+P YIAPEVL
Sbjct: 133 MQVCHRDLKLENTLL--DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKK 190
Query: 220 -YN-QAADVWSAGVILYILLSGMPPFWGNTKSRIFDAV--RTADLRFPSNPWDHISDSAK 275
Y+ + ADVWS GV LY++L G PF + + F R ++++ + HIS +
Sbjct: 191 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECR 250
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSW 300
L+ + DP++R++ ++ +H W
Sbjct: 251 HLISRIFVADPAKRISIPEIRNHEW 275
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 143/269 (53%), Gaps = 10/269 (3%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +G+ LG G+FG + + +K + + A K + K +L E ++ E+EI + L
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 69
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + D V+L++E G ++ L+K +F E +L + YCH
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG- 219
V+HRD+KPEN+LL S+ +K+ADFG + + P G+ Y+ PE++ G
Sbjct: 130 KRVIHRDIKPENLLL---GSAGELKIADFGWSVHA-PSSRRAALCGTLDYLPPEMIEGRM 185
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+++ D+WS GV+ Y L G PPF NT + + + FP D +++ A+DL+
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 241
Query: 280 GMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+L +PSQR R+VL+H W+ P
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWITANSSKP 270
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 143/269 (53%), Gaps = 10/269 (3%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +G+ LG G+FG + + +K + + A K + K +L E ++ E+EI + L
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 71
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + D V+L++E G ++ L+K +F E +L + YCH
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG- 219
V+HRD+KPEN+LL S+ +K+ADFG + + P G+ Y+ PE++ G
Sbjct: 132 KRVIHRDIKPENLLL---GSAGELKIADFGWSVHA-PSSRRTTLCGTLDYLPPEMIEGRM 187
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+++ D+WS GV+ Y L G PPF NT + + + FP D +++ A+DL+
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 243
Query: 280 GMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+L +PSQR R+VL+H W+ P
Sbjct: 244 RLLKHNPSQRPMLREVLEHPWITANSSKP 272
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 143/269 (53%), Gaps = 10/269 (3%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +G+ LG G+FG + + +K + + A K + K +L E ++ E+EI + L
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 68
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + D V+L++E G ++ L+K +F E +L + YCH
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 128
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG- 219
V+HRD+KPEN+LL S+ +K+ADFG + + P G+ Y+ PE++ G
Sbjct: 129 KRVIHRDIKPENLLL---GSAGELKIADFGWSVHA-PSSRRXXLCGTLDYLPPEMIEGRM 184
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+++ D+WS GV+ Y L G PPF NT + + + FP D +++ A+DL+
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 240
Query: 280 GMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+L +PSQR R+VL+H W+ P
Sbjct: 241 RLLKHNPSQRPMLREVLEHPWITANSSKP 269
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 99/265 (37%), Positives = 145/265 (54%), Gaps = 12/265 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ L + +G G FGV R+ DK + E+ A K I + + + +R + I R
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREI-----INHRSLR 73
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN+V K V ++ +VME +GGELF R+ GRFSE EAR F QL+ V YCH
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 161 IGVVHRDLKPENILLATKASSSP-IKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG 219
+ V HRDLK EN LL S +P +K+ DFG + TVG+P YIAPEVL
Sbjct: 134 MQVCHRDLKLENTLL--DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKK 191
Query: 220 -YN-QAADVWSAGVILYILLSGMPPFWGNTKSRIFDAV--RTADLRFPSNPWDHISDSAK 275
Y+ + ADVWS GV LY++L G PF + + F R ++++ + HIS +
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECR 251
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSW 300
L+ + DP++R++ ++ +H W
Sbjct: 252 HLISRIFVADPAKRISIPEIRNHEW 276
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 143/269 (53%), Gaps = 10/269 (3%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +G+ LG G+FG + + +K + + A K + K +L E ++ E+EI + L
Sbjct: 34 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 92
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + D V+L++E G ++ L+K +F E +L + YCH
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 152
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG- 219
V+HRD+KPEN+LL S+ +K+ADFG + + P G+ Y+ PE++ G
Sbjct: 153 KRVIHRDIKPENLLL---GSAGELKIADFGWSVHA-PSSRRDDLCGTLDYLPPEMIEGRM 208
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+++ D+WS GV+ Y L G PPF NT + + + FP D +++ A+DL+
Sbjct: 209 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 264
Query: 280 GMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+L +PSQR R+VL+H W+ P
Sbjct: 265 RLLKHNPSQRPMLREVLEHPWITANSSKP 293
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 143/269 (53%), Gaps = 10/269 (3%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +G+ LG G+FG + + +K + + A K + K +L E ++ E+EI + L
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 69
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + D V+L++E G ++ L+K +F E +L + YCH
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG- 219
V+HRD+KPEN+LL S+ +K+ADFG + + P G+ Y+ PE++ G
Sbjct: 130 KRVIHRDIKPENLLL---GSAGELKIADFGWSVHA-PSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+++ D+WS GV+ Y L G PPF NT + + + FP D +++ A+DL+
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 241
Query: 280 GMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+L +PSQR R+VL+H W+ P
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWITANSSKP 270
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 143/269 (53%), Gaps = 10/269 (3%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +G+ LG G+FG + + +K + + A K + K +L E ++ E+EI + L
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 66
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + D V+L++E G ++ L+K +F E +L + YCH
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG- 219
V+HRD+KPEN+LL S+ +K+ADFG + + P G+ Y+ PE++ G
Sbjct: 127 KRVIHRDIKPENLLL---GSAGELKIADFGWSVHA-PSSRRTTLCGTLDYLPPEMIEGRM 182
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+++ D+WS GV+ Y L G PPF NT + + + FP D +++ A+DL+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 238
Query: 280 GMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+L +PSQR R+VL+H W+ P
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 142/269 (52%), Gaps = 10/269 (3%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +G+ LG G+FG + + +K + + A K + K +L E ++ E+EI + L
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 71
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + D V+L++E G ++ L+K +F E +L + YCH
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAG-G 219
V+HRD+KPEN+LL S+ +K+ADFG + + P G+ Y+ PE + G
Sbjct: 132 KRVIHRDIKPENLLL---GSAGELKIADFGWSVHA-PSSRRTTLCGTLDYLPPEXIEGRX 187
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+++ D+WS GV+ Y L G PPF NT + + + FP D +++ A+DL+
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 243
Query: 280 GMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+L +PSQR R+VL+H W+ P
Sbjct: 244 RLLKHNPSQRPXLREVLEHPWITANSSKP 272
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 143/269 (53%), Gaps = 10/269 (3%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +G+ LG G+FG + + +K + + A K + K +L E ++ E+EI + L
Sbjct: 13 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 71
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + D V+L++E G ++ L+K +F E +L + YCH
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 131
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG- 219
V+HRD+KPEN+LL S+ +K+ADFG + + P G+ Y+ PE++ G
Sbjct: 132 KRVIHRDIKPENLLL---GSAGELKIADFGWSVHA-PSSRRTDLCGTLDYLPPEMIEGRM 187
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+++ D+WS GV+ Y L G PPF NT + + + FP D +++ A+DL+
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 243
Query: 280 GMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+L +PSQR R+VL+H W+ P
Sbjct: 244 RLLKHNPSQRPMLREVLEHPWITANSSKP 272
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 143/269 (53%), Gaps = 10/269 (3%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +G+ LG G+FG + + +K + + A K + K +L E ++ E+EI + L
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 67
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + D V+L++E G ++ L+K +F E +L + YCH
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG- 219
V+HRD+KPEN+LL S+ +K+ADFG + + P G+ Y+ PE++ G
Sbjct: 128 KRVIHRDIKPENLLL---GSAGELKIADFGWSVHA-PSSRRTDLCGTLDYLPPEMIEGRM 183
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+++ D+WS GV+ Y L G PPF NT + + + FP D +++ A+DL+
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 239
Query: 280 GMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+L +PSQR R+VL+H W+ P
Sbjct: 240 RLLKHNPSQRPMLREVLEHPWITANSSKP 268
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 164 bits (414), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 143/269 (53%), Gaps = 10/269 (3%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +G+ LG G+FG + + +K + + A K + K +L E ++ E+EI + L
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 66
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + D V+L++E G ++ L+K +F E +L + YCH
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG- 219
V+HRD+KPEN+LL S+ +K+ADFG + + P G+ Y+ PE++ G
Sbjct: 127 KRVIHRDIKPENLLL---GSAGELKIADFGWSVHA-PSSRRTELCGTLDYLPPEMIEGRM 182
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+++ D+WS GV+ Y L G PPF NT + + + FP D +++ A+DL+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 238
Query: 280 GMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+L +PSQR R+VL+H W+ P
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 148/282 (52%), Gaps = 11/282 (3%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +G+ LG G+FG + + +K + + A K + K +L E ++ E+EI + L
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 67
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + D V+L++E G ++ L+K +F E +L + YCH
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG- 219
V+HRD+KPEN+LL S+ +K+ADFG + + P G+ Y+ PE++ G
Sbjct: 128 KRVIHRDIKPENLLL---GSAGELKIADFGWSCHA-PSSRRTTLSGTLDYLPPEMIEGRM 183
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+++ D+WS GV+ Y L G PPF NT + + + FP D +++ A+DL+
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 239
Query: 280 GMLSTDPSQRLTARQVLDHSWMGDGIQDPEKLSGNKIEDCKE 321
+L +PSQR R+VL+H W+ P S NK K+
Sbjct: 240 RLLKHNPSQRPMLREVLEHPWITANSSKPSN-SQNKESASKQ 280
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 143/269 (53%), Gaps = 10/269 (3%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +G+ LG G+FG + + +K + + A K + K +L E ++ E+EI + L
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 66
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + D V+L++E G ++ L+K +F E +L + YCH
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG- 219
V+HRD+KPEN+LL S+ +K+ADFG + + P G+ Y+ PE++ G
Sbjct: 127 KRVIHRDIKPENLLL---GSAGELKIADFGWSVHA-PSSRRAALCGTLDYLPPEMIEGRM 182
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+++ D+WS GV+ Y L G PPF NT + + + FP D +++ A+DL+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 238
Query: 280 GMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+L +PSQR R+VL+H W+ P
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 143/269 (53%), Gaps = 10/269 (3%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +G+ LG G+FG + + +K + + A K + K +L E ++ E+EI + L
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 66
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + D V+L++E G ++ L+K +F E +L + YCH
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG- 219
V+HRD+KPEN+LL S+ +K+ADFG + + P G+ Y+ PE++ G
Sbjct: 127 KRVIHRDIKPENLLL---GSAGELKIADFGWSVHA-PSSRRTDLCGTLDYLPPEMIEGRM 182
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+++ D+WS GV+ Y L G PPF NT + + + FP D +++ A+DL+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 238
Query: 280 GMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+L +PSQR R+VL+H W+ P
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 143/269 (53%), Gaps = 10/269 (3%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +G+ LG G+FG + + +K + + A K + K +L E ++ E+EI + L
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 66
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + D V+L++E G ++ L+K +F E +L + YCH
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG- 219
V+HRD+KPEN+LL S+ +K+ADFG + + P G+ Y+ PE++ G
Sbjct: 127 KRVIHRDIKPENLLL---GSAGELKIADFGWSVHA-PSSRRTDLCGTLDYLPPEMIEGRM 182
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+++ D+WS GV+ Y L G PPF NT + + + FP D +++ A+DL+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 238
Query: 280 GMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+L +PSQR R+VL+H W+ P
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 143/269 (53%), Gaps = 10/269 (3%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +G+ LG G+FG + + +K + + A K + K +L E ++ E+EI + L
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 66
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + D V+L++E G ++ L+K +F E +L + YCH
Sbjct: 67 HPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG- 219
V+HRD+KPEN+LL S+ +K+ADFG + + P G+ Y+ PE++ G
Sbjct: 127 KKVIHRDIKPENLLL---GSAGELKIADFGWSVHA-PSSRRAALCGTLDYLPPEMIEGRM 182
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+++ D+WS GV+ Y L G PPF NT + + + FP D +++ A+DL+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFP----DFVTEGARDLIS 238
Query: 280 GMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+L +PSQR R+VL+H W+ P
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 154/292 (52%), Gaps = 25/292 (8%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
Q LG G G + C + TG+ A K + D + E++ + SG P++V
Sbjct: 16 QVLGLGVNGKVLECFHRRTGQKCALKLLY--------DSPKARQEVDHHWQASGGPHIVC 67
Query: 107 LKAVYEDEDY----VHLVMELCAGGELFHRLEKFG--RFSEAEARVLFMQLMQVVLYCHE 160
+ VYE+ + + ++ME GGELF R+++ G F+E EA + + + + H
Sbjct: 68 ILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS 127
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT-VGSPFYIAPEVLA-G 218
+ HRD+KPEN+L +K + +KL DFG A E Q+ L T +P+Y+APEVL
Sbjct: 128 HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTPCYTPYYVAPEVLGPE 185
Query: 219 GYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDA----VRTADLRFPSNPWDHISDSA 274
Y+++ D+WS GVI+YILL G PPF+ NT I +R FP+ W +S+ A
Sbjct: 186 KYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDA 245
Query: 275 KDLVMGMLSTDPSQRLTARQVLDHSWMGDGI---QDPEKLSGNKIEDCKEWD 323
K L+ +L TDP++RLT Q ++H W+ + Q P + ED WD
Sbjct: 246 KQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTARVLQEDKDHWD 297
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 154/292 (52%), Gaps = 25/292 (8%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
Q LG G G + C + TG+ A K + D + E++ + SG P++V
Sbjct: 35 QVLGLGVNGKVLECFHRRTGQKCALKLLY--------DSPKARQEVDHHWQASGGPHIVC 86
Query: 107 LKAVYEDEDY----VHLVMELCAGGELFHRLEKFG--RFSEAEARVLFMQLMQVVLYCHE 160
+ VYE+ + + ++ME GGELF R+++ G F+E EA + + + + H
Sbjct: 87 ILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS 146
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT-VGSPFYIAPEVLA-G 218
+ HRD+KPEN+L +K + +KL DFG A E Q+ L T +P+Y+APEVL
Sbjct: 147 HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQNALQTPCYTPYYVAPEVLGPE 204
Query: 219 GYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDA----VRTADLRFPSNPWDHISDSA 274
Y+++ D+WS GVI+YILL G PPF+ NT I +R FP+ W +S+ A
Sbjct: 205 KYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDA 264
Query: 275 KDLVMGMLSTDPSQRLTARQVLDHSWMGDGI---QDPEKLSGNKIEDCKEWD 323
K L+ +L TDP++RLT Q ++H W+ + Q P + ED WD
Sbjct: 265 KQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPLHTARVLQEDKDHWD 316
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/264 (35%), Positives = 144/264 (54%), Gaps = 12/264 (4%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHP 102
F+ ++LG G FG + + ++ +G K+I KDR ++ ++ EIE++ L HP
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQ--IEAEIEVLKSLD-HP 80
Query: 103 NVVDLKAVYEDEDYVHLVMELCAGGELFHRL---EKFGR-FSEAEARVLFMQLMQVVLYC 158
N++ + V+ED +++VME C GGEL R+ + G+ SE L Q+M + Y
Sbjct: 81 NIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYF 140
Query: 159 HEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAG 218
H VVH+DLKPENIL + SPIK+ DFGLA + + G+ Y+APEV
Sbjct: 141 HSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKR 200
Query: 219 GYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWD--HISDSAKD 276
D+WSAGV++Y LL+G PF G + + + A + P+ + ++ A D
Sbjct: 201 DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV---QQKATYKEPNYAVECRPLTPQAVD 257
Query: 277 LVMGMLSTDPSQRLTARQVLDHSW 300
L+ ML+ DP +R +A QVL H W
Sbjct: 258 LLKQMLTKDPERRPSAAQVLHHEW 281
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 146/271 (53%), Gaps = 14/271 (5%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +G+ LG G+FG + + +K + + A K + K +L E ++ E+EI + L
Sbjct: 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 67
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + D V+L++E G ++ L+K +F E +L + YCH
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 127
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQ--SLLGTVGSPFYIAPEVLAG 218
V+HRD+KPEN+LL S+ +K+ADFG + + + +L GT+ Y+ PE++ G
Sbjct: 128 KRVIHRDIKPENLLL---GSAGELKIADFGWSVHAPSSRRDTLCGTLD---YLPPEMIEG 181
Query: 219 G-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDL 277
+++ D+WS GV+ Y L G PPF NT + + + FP D +++ A+DL
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDL 237
Query: 278 VMGMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+ +L +PSQR R+VL+H W+ P
Sbjct: 238 ISRLLKHNPSQRPMLREVLEHPWITANSSKP 268
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 143/269 (53%), Gaps = 10/269 (3%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +G+ LG G+FG + + +K + + A K + K +L E ++ E+EI + L
Sbjct: 7 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 65
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + D V+L++E G ++ L+K +F E +L + YCH
Sbjct: 66 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 125
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG- 219
V+HRD+KPEN+LL S+ +K+ADFG + + P G+ Y+ PE++ G
Sbjct: 126 KRVIHRDIKPENLLL---GSAGELKIADFGWSVHA-PSSRRTTLCGTLDYLPPEMIEGRM 181
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+++ D+WS GV+ Y L G PPF NT + + + FP D +++ A+DL+
Sbjct: 182 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 237
Query: 280 GMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+L +PSQR R+VL+H W+ P
Sbjct: 238 RLLKHNPSQRPMLREVLEHPWITANSSKP 266
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 143/269 (53%), Gaps = 10/269 (3%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +G+ LG G+FG + + +K + + A K + K +L E ++ E+EI + L
Sbjct: 10 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 68
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + D V+L++E G ++ L+K +F E +L + YCH
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 128
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG- 219
V+HRD+KPEN+LL S+ +K+A+FG + + P G+ Y+ PE++ G
Sbjct: 129 KRVIHRDIKPENLLL---GSAGELKIANFGWSVHA-PSSRRTTLCGTLDYLPPEMIEGRM 184
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+++ D+WS GV+ Y L G PPF NT + + + FP D +++ A+DL+
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 240
Query: 280 GMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+L +PSQR R+VL+H W+ P
Sbjct: 241 RLLKHNPSQRPMLREVLEHPWITANSSKP 269
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/298 (33%), Positives = 152/298 (51%), Gaps = 30/298 (10%)
Query: 44 VLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPN 103
V Q LG G G + +K T E FA K + D + E+E+ R S P+
Sbjct: 65 VTSQVLGLGINGKVLQIFNKRTQEKFALKXL--------QDCPKARREVELHWRASQCPH 116
Query: 104 VVDLKAVYED----EDYVHLVMELCAGGELFHRLEKFG--RFSEAEARVLFMQLMQVVLY 157
+V + VYE+ + +V E GGELF R++ G F+E EA + + + + Y
Sbjct: 117 IVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQY 176
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLA 217
H I + HRD+KPEN+L +K ++ +KL DFG A SL +P+Y+APEVL
Sbjct: 177 LHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLG 236
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGN--------TKSRIFDAVRTADLRFPSNPWD 268
Y+++ D WS GVI YILL G PPF+ N K+RI R FP+ W
Sbjct: 237 PEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRI----RXGQYEFPNPEWS 292
Query: 269 HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPEK-LSGNKI--EDCKEWD 323
+S+ K L+ +L T+P+QR T + +H W+ + P+ L +++ ED + W+
Sbjct: 293 EVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQSTKVPQTPLHTSRVLKEDKERWE 350
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 143/269 (53%), Gaps = 10/269 (3%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +G+ LG G+FG + + +K + + A K + K +L E ++ E+EI + L
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 66
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + D V+L++E G ++ L+K +F E +L + YCH
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG- 219
V+HRD+KPEN+LL S+ +K+ADFG + + P G+ Y+ PE++ G
Sbjct: 127 KRVIHRDIKPENLLL---GSAGELKIADFGWSVHA-PSSRRTXLCGTLDYLPPEMIEGRM 182
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+++ D+WS GV+ Y L G PPF NT + + + FP D +++ A+DL+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 238
Query: 280 GMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+L +PSQR R+VL+H W+ P
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 143/269 (53%), Gaps = 10/269 (3%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +G+ LG G+FG + + +K + + A K + K +L E ++ E+EI + L
Sbjct: 12 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 70
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + D V+L++E G ++ L+K +F E +L + YCH
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 130
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG- 219
V+HRD+KPEN+LL S+ +K+ADFG + + P G+ Y+ PE++ G
Sbjct: 131 KRVIHRDIKPENLLL---GSAGELKIADFGWSVHA-PSSRRTTLCGTLDYLPPEMIEGRM 186
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+++ D+WS GV+ Y L G PPF NT + + + FP D +++ A+DL+
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 242
Query: 280 GMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+L +PSQR R+VL+H W+ P
Sbjct: 243 RLLKHNPSQRPMLREVLEHPWITANSSKP 271
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 143/269 (53%), Gaps = 10/269 (3%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +G+ LG G+FG + + +K + + A K + K +L E ++ E+EI + L
Sbjct: 8 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 66
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + D V+L++E G ++ L+K +F E +L + YCH
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 126
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG- 219
V+HRD+KPEN+LL S+ +K+ADFG + + P G+ Y+ PE++ G
Sbjct: 127 KRVIHRDIKPENLLL---GSAGELKIADFGWSVHA-PSSRRXXLCGTLDYLPPEMIEGRM 182
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+++ D+WS GV+ Y L G PPF NT + + + FP D +++ A+DL+
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 238
Query: 280 GMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+L +PSQR R+VL+H W+ P
Sbjct: 239 RLLKHNPSQRPMLREVLEHPWITANSSKP 267
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 144/277 (51%), Gaps = 15/277 (5%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
I N R L + +G G F +++ TG+ A K I K +L + ++ + E+ I
Sbjct: 12 HIGNYR----LLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRI 66
Query: 95 MTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
M L+ HPN+V L V E E ++LVME +GGE+F L GR E EAR F Q++
Sbjct: 67 MKVLN-HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
V YCH+ +VHRDLK EN+LL + IK+ADFG + G L GSP Y APE
Sbjct: 126 VQYCHQKFIVHRDLKAENLLLDADMN---IKIADFGFSNEFTFGNKLDTFCGSPPYAAPE 182
Query: 215 VLAGGYNQA--ADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
+ G DVWS GVILY L+SG PF G + + V R P ++S
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMST 238
Query: 273 SAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPE 309
++L+ L +PS+R T Q++ WM G +D E
Sbjct: 239 DCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDE 275
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 142/262 (54%), Gaps = 10/262 (3%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +G+ LG G+FG + + +K + + A K + K +L E ++ E+EI + L
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 69
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + D V+L++E G ++ L+K +F E +L + YCH
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG- 219
V+HRD+KPEN+LL S+ +K+ADFG + + P G+ Y+ PE++ G
Sbjct: 130 KRVIHRDIKPENLLL---GSAGELKIADFGWSVHA-PSSRRXXLCGTLDYLPPEMIEGRM 185
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+++ D+WS GV+ Y L G PPF NT + + + FP D +++ A+DL+
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 241
Query: 280 GMLSTDPSQRLTARQVLDHSWM 301
+L +PSQR R+VL+H W+
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWI 263
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 142/262 (54%), Gaps = 10/262 (3%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +G+ LG G+FG + + +K + + A K + K +L E ++ E+EI + L
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 69
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + D V+L++E G ++ L+K +F E +L + YCH
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG- 219
V+HRD+KPEN+LL S+ +K+ADFG + + P G+ Y+ PE++ G
Sbjct: 130 KRVIHRDIKPENLLL---GSAGELKIADFGWSVHA-PSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+++ D+WS GV+ Y L G PPF NT + + + FP D +++ A+DL+
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 241
Query: 280 GMLSTDPSQRLTARQVLDHSWM 301
+L +PSQR R+VL+H W+
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWI 263
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 144/277 (51%), Gaps = 15/277 (5%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
I N R L + +G G F +++ TG+ A K I K +L + ++ + E+ I
Sbjct: 12 HIGNYR----LLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRI 66
Query: 95 MTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
M L+ HPN+V L V E E ++LVME +GGE+F L GR E EAR F Q++
Sbjct: 67 MKVLN-HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
V YCH+ +VHRDLK EN+LL + IK+ADFG + G L GSP Y APE
Sbjct: 126 VQYCHQKFIVHRDLKAENLLLDADMN---IKIADFGFSNEFTFGNKLDTFCGSPPYAAPE 182
Query: 215 VLAGGYNQA--ADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
+ G DVWS GVILY L+SG PF G + + V R P ++S
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMST 238
Query: 273 SAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPE 309
++L+ L +PS+R T Q++ WM G +D E
Sbjct: 239 DCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDE 275
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 143/260 (55%), Gaps = 10/260 (3%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHP 102
F + + LG G+FG + + +K + A K + K +L E ++ EIEI + L HP
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HP 74
Query: 103 NVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIG 162
N++ + + D ++L++E GEL+ L+K GRF E + +L + YCHE
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERK 134
Query: 163 VVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG-YN 221
V+HRD+KPEN+L+ K +K+ADFG + + P G+ Y+ PE++ G ++
Sbjct: 135 VIHRDIKPENLLMGYKGE---LKIADFGWSVHA-PSLRRRXMCGTLDYLPPEMIEGKTHD 190
Query: 222 QAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGM 281
+ D+W AGV+ Y L GMPPF + + + DL+FP P+ +SD +KDL+ +
Sbjct: 191 EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP--PF--LSDGSKDLISKL 246
Query: 282 LSTDPSQRLTARQVLDHSWM 301
L P QRL + V++H W+
Sbjct: 247 LRYHPPQRLPLKGVMEHPWV 266
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 144/277 (51%), Gaps = 15/277 (5%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
I N R L + +G G F +++ TG+ A K I K +L + ++ + E+ I
Sbjct: 12 HIGNYR----LLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRI 66
Query: 95 MTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
M L+ HPN+V L V E E ++LVME +GGE+F L GR E EAR F Q++
Sbjct: 67 MKVLN-HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
V YCH+ +VHRDLK EN+LL + IK+ADFG + G L G+P Y APE
Sbjct: 126 VQYCHQKFIVHRDLKAENLLLDADMN---IKIADFGFSNEFTFGNKLDAFCGAPPYAAPE 182
Query: 215 VLAGGYNQA--ADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
+ G DVWS GVILY L+SG PF G + + V R P ++S
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMST 238
Query: 273 SAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPE 309
++L+ L +PS+R T Q++ WM G +D E
Sbjct: 239 DCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDE 275
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 144/269 (53%), Gaps = 10/269 (3%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +G+ LG G+FG + + ++ + + A K + K +L E ++ E+EI + L
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR- 70
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + D V+L++E G ++ L+K RF E +L + YCH
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHS 130
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG- 219
V+HRD+KPEN+LL S+ +K+ADFG + + P G+ Y+ PE++ G
Sbjct: 131 KRVIHRDIKPENLLL---GSNGELKIADFGWSVHA-PSSRRTTLCGTLDYLPPEMIEGRM 186
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+++ D+WS GV+ Y L GMPPF +T + + + FP D +++ A+DL+
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFP----DFVTEGARDLIS 242
Query: 280 GMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+L + SQRLT +VL+H W+ P
Sbjct: 243 RLLKHNASQRLTLAEVLEHPWIKANSSKP 271
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 101/265 (38%), Positives = 146/265 (55%), Gaps = 12/265 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ L + +G G FGV R+ DK + E+ A K I + + + +VK EI I R
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKI----DENVKREI-INHRSLR 73
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN+V K V ++ +VME +GGELF R+ GRFSE EAR F QL+ V YCH
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 161 IGVVHRDLKPENILLATKASSSP-IKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG 219
+ V HRDLK EN LL S +P +K+ FG + TVG+P YIAPEVL
Sbjct: 134 MQVCHRDLKLENTLL--DGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKK 191
Query: 220 -YN-QAADVWSAGVILYILLSGMPPFWGNTKSRIFDAV--RTADLRFPSNPWDHISDSAK 275
Y+ + ADVWS GV LY++L G PF + + F R ++++ + HIS +
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECR 251
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSW 300
L+ + DP++R++ ++ +H W
Sbjct: 252 HLISRIFVADPAKRISIPEIRNHEW 276
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/269 (31%), Positives = 143/269 (53%), Gaps = 10/269 (3%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +G+ LG G+FG + + +K + + A K + K +L E ++ E+EI + L
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 69
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + D V+L++E G ++ L+K +F E +L + YCH
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG- 219
V+HRD+KPEN+LL S+ +K+A+FG + + P G+ Y+ PE++ G
Sbjct: 130 KRVIHRDIKPENLLL---GSAGELKIANFGWSVHA-PSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+++ D+WS GV+ Y L G PPF NT + + + FP D +++ A+DL+
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 241
Query: 280 GMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+L +PSQR R+VL+H W+ P
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWITANSSKP 270
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 101/265 (38%), Positives = 146/265 (55%), Gaps = 12/265 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ L + +G G FGV R+ DK + E+ A K I + + + +VK EI I R
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKI----DENVKREI-INHRSLR 73
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN+V K V ++ +VME +GGELF R+ GRFSE EAR F QL+ V YCH
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHA 133
Query: 161 IGVVHRDLKPENILLATKASSSP-IKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG 219
+ V HRDLK EN LL S +P +K+ FG + TVG+P YIAPEVL
Sbjct: 134 MQVCHRDLKLENTLL--DGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKK 191
Query: 220 -YN-QAADVWSAGVILYILLSGMPPFWGNTKSRIFDAV--RTADLRFPSNPWDHISDSAK 275
Y+ + ADVWS GV LY++L G PF + + F R ++++ + HIS +
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECR 251
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSW 300
L+ + DP++R++ ++ +H W
Sbjct: 252 HLISRIFVADPAKRISIPEIRNHEW 276
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 87/269 (32%), Positives = 143/269 (53%), Gaps = 10/269 (3%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +G+ LG G+FG + + +K + + A K + K +L E ++ E+EI + L
Sbjct: 11 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 69
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + D V+L++E G ++ L+K +F E +L + YCH
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 129
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG- 219
V+HRD+KPEN+LL S+ +K+ADFG + + P G+ Y+ PE++ G
Sbjct: 130 KRVIHRDIKPENLLL---GSAGELKIADFGWSVHA-PSSRRDDLCGTLDYLPPEMIEGRM 185
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+++ D+WS GV+ Y L G PPF NT + + + FP D +++ A+DL+
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 241
Query: 280 GMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+L +PSQR R+VL+H W+ P
Sbjct: 242 RLLKHNPSQRPMLREVLEHPWITANSSKP 270
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 144/277 (51%), Gaps = 15/277 (5%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
I N R L + +G G F +++ TG+ A + I K +L + ++ + E+ I
Sbjct: 12 HIGNYR----LLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRI 66
Query: 95 MTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
M L+ HPN+V L V E E ++LVME +GGE+F L GR E EAR F Q++
Sbjct: 67 MKVLN-HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
V YCH+ +VHRDLK EN+LL + IK+ADFG + G L GSP Y APE
Sbjct: 126 VQYCHQKFIVHRDLKAENLLLDADMN---IKIADFGFSNEFTFGNKLDTFCGSPPYAAPE 182
Query: 215 VLAGGYNQA--ADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
+ G DVWS GVILY L+SG PF G + + V R P ++S
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMST 238
Query: 273 SAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPE 309
++L+ L +PS+R T Q++ WM G +D E
Sbjct: 239 DCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDE 275
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 104/265 (39%), Positives = 147/265 (55%), Gaps = 12/265 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ L + +G G FGV R+ DK E+ A K I +R ID+ +VK EI I R
Sbjct: 19 DRYELVKDIGAGNFGVARLMRDKQANELVAVKYI--ERGEKIDE--NVKREI-INHRSLR 73
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN+V K V ++ +VME +GGELF R+ GRFSE EAR F QL+ V Y H
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHA 133
Query: 161 IGVVHRDLKPENILLATKASSSP-IKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG 219
+ V HRDLK EN LL S +P +K+ADFG + VG+P YIAPEVL
Sbjct: 134 MQVAHRDLKLENTLL--DGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKK 191
Query: 220 -YN-QAADVWSAGVILYILLSGMPPFWGNTKSRIFDAV--RTADLRFPSNPWDHISDSAK 275
Y+ + ADVWS GV LY++L G PF + + F R ++++ + HIS +
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECR 251
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSW 300
L+ + DP++R++ ++ +H W
Sbjct: 252 HLISRIFVADPAKRISIPEIRNHEW 276
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 161 bits (407), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 141/262 (53%), Gaps = 10/262 (3%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +G+ LG G+FG + + +K + A K + K +L E ++ E+EI + L
Sbjct: 5 EDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR- 63
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + D V+L++E G ++ L+K +F E +L + YCH
Sbjct: 64 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 123
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG- 219
V+HRD+KPEN+LL S+ +K+ADFG + + P G+ Y+ PE++ G
Sbjct: 124 KRVIHRDIKPENLLL---GSAGELKIADFGWSVHA-PSSRRTTLCGTLDYLPPEMIEGRM 179
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+++ D+WS GV+ Y L G PPF NT + + + FP D +++ A+DL+
Sbjct: 180 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTEGARDLIS 235
Query: 280 GMLSTDPSQRLTARQVLDHSWM 301
+L +PSQR R+VL+H W+
Sbjct: 236 RLLKHNPSQRPMLREVLEHPWI 257
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 161 bits (407), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 144/277 (51%), Gaps = 15/277 (5%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
I N R L + +G G F +++ TG+ A + I K +L + ++ + E+ I
Sbjct: 12 HIGNYR----LLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFR-EVRI 66
Query: 95 MTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
M L+ HPN+V L V E E ++LVME +GGE+F L GR E EAR F Q++
Sbjct: 67 MKVLN-HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 125
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
V YCH+ +VHRDLK EN+LL + IK+ADFG + G L GSP Y APE
Sbjct: 126 VQYCHQKFIVHRDLKAENLLLDADMN---IKIADFGFSNEFTFGNKLDEFCGSPPYAAPE 182
Query: 215 VLAGGYNQA--ADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
+ G DVWS GVILY L+SG PF G + + V R P ++S
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMST 238
Query: 273 SAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPE 309
++L+ L +PS+R T Q++ WM G +D E
Sbjct: 239 DCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDE 275
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 147/271 (54%), Gaps = 14/271 (5%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +G+ LG G+FG + + ++ + + A K + K +L E ++ E+EI + L
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR- 70
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN++ L + D V+L++E G ++ L+K RF E +L + YCH
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHS 130
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQ--SLLGTVGSPFYIAPEVLAG 218
V+HRD+KPEN+LL S+ +K+ADFG + + + +L GT+ Y+ PE++ G
Sbjct: 131 KRVIHRDIKPENLLL---GSNGELKIADFGWSVHAPSSRRDTLCGTLD---YLPPEMIEG 184
Query: 219 G-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDL 277
+++ D+WS GV+ Y L GMPPF +T + + + FP D +++ A+DL
Sbjct: 185 RMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFP----DFVTEGARDL 240
Query: 278 VMGMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+ +L + SQRLT +VL+H W+ P
Sbjct: 241 ISRLLKHNASQRLTLAEVLEHPWIKANSSKP 271
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/282 (35%), Positives = 144/282 (51%), Gaps = 32/282 (11%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
LG G ++ C + T + +A K I K V E+E++ + GH NV++L
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQ---PGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 109 AVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDL 168
+E+ED +LV E GG + + K F+E EA V+ + + + H G+ HRDL
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDL 137
Query: 169 KPENILLATKASSSPIKLADFGLATYIE--------PGQSLLGTVGSPFYIAPEVL---- 216
KPENIL SP+K+ DFGL + I+ LL GS Y+APEV+
Sbjct: 138 KPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS 197
Query: 217 --AGGYNQAADVWSAGVILYILLSGMPPFWGN---------------TKSRIFDAVRTAD 259
A Y++ D+WS GVILYILLSG PPF G ++ +F++++
Sbjct: 198 EEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGK 257
Query: 260 LRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
FP W HIS +AKDL+ +L D QRL+A QVL H W+
Sbjct: 258 YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV 299
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 143/264 (54%), Gaps = 11/264 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +G LG G F + TG A K I K + + V+ E++I +L
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK- 69
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-KFGRFSEAEARVLFMQLMQVVLYCH 159
HP++++L +ED +YV+LV+E+C GE+ L+ + FSE EAR Q++ +LY H
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH 129
Query: 160 EIGVVHRDLKPENILLATKASSSPIKLADFGLATYIE-PGQSLLGTVGSPFYIAPEVLA- 217
G++HRDL N+LL + IK+ADFGLAT ++ P + G+P YI+PE+
Sbjct: 130 SHGILHRDLTLSNLLLTRNMN---IKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATR 186
Query: 218 GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDL 277
+ +DVWS G + Y LL G PPF +T + V AD PS +S AKDL
Sbjct: 187 SAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPS----FLSIEAKDL 242
Query: 278 VMGMLSTDPSQRLTARQVLDHSWM 301
+ +L +P+ RL+ VLDH +M
Sbjct: 243 IHQLLRRNPADRLSLSSVLDHPFM 266
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 146/291 (50%), Gaps = 34/291 (11%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
LG G + ++ G+ +A K I K V E+E + + G+ N+++L
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQ---AGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 109 AVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDL 168
+ED+ +LV E GG + ++K F+E EA + + + + H G+ HRDL
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDL 137
Query: 169 KPENILLATKASSSPIKLADFGLATYIEPGQS--------LLGTVGSPFYIAPEVL---- 216
KPENIL + SP+K+ DF L + ++ S L GS Y+APEV+
Sbjct: 138 KPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFT 197
Query: 217 --AGGYNQAADVWSAGVILYILLSGMPPFWGN---------------TKSRIFDAVRTAD 259
A Y++ D+WS GV+LYI+LSG PPF G+ ++++F++++
Sbjct: 198 DQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGK 257
Query: 260 LRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPEK 310
FP W HIS AKDL+ +L D QRL+A QVL H W+ Q PEK
Sbjct: 258 YEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQG--QAPEK 306
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 157 bits (398), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 103/277 (37%), Positives = 143/277 (51%), Gaps = 15/277 (5%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
I N R L + +G G F +++ TG+ A K I K +L + ++ + E+ I
Sbjct: 5 HIGNYR----LLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRI 59
Query: 95 MTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
M L+ HPN+V L V E E ++LVME +GGE+F L G E EAR F Q++
Sbjct: 60 MKVLN-HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSA 118
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
V YCH+ +VHRDLK EN+LL + IK+ADFG + G L GSP Y APE
Sbjct: 119 VQYCHQKFIVHRDLKAENLLLDADMN---IKIADFGFSNEFTFGNKLDTFCGSPPYAAPE 175
Query: 215 VLAGGYNQA--ADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
+ G DVWS GVILY L+SG PF G + + V R P ++S
Sbjct: 176 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMST 231
Query: 273 SAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPE 309
++L+ L +PS+R T Q++ WM G +D E
Sbjct: 232 DCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDDE 268
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 143/282 (50%), Gaps = 32/282 (11%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
LG G ++ C + T + +A K I K V E+E++ + GH NV++L
Sbjct: 21 LGEGAHARVQTCINLITSQEYAVKIIEKQ---PGHIRSRVFREVEMLYQCQGHRNVLELI 77
Query: 109 AVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDL 168
+E+ED +LV E GG + + K F+E EA V+ + + + H G+ HRDL
Sbjct: 78 EFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDL 137
Query: 169 KPENILLATKASSSPIKLADFGLATYIE--------PGQSLLGTVGSPFYIAPEVL---- 216
KPENIL SP+K+ DF L + I+ LL GS Y+APEV+
Sbjct: 138 KPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS 197
Query: 217 --AGGYNQAADVWSAGVILYILLSGMPPFWGN---------------TKSRIFDAVRTAD 259
A Y++ D+WS GVILYILLSG PPF G ++ +F++++
Sbjct: 198 EEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGK 257
Query: 260 LRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
FP W HIS +AKDL+ +L D QRL+A QVL H W+
Sbjct: 258 YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWV 299
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 104/266 (39%), Positives = 146/266 (54%), Gaps = 14/266 (5%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G FGV R+ DK T E+ A K I +R ID+ +V+ EI I R
Sbjct: 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYI--ERGAAIDE--NVQREI-INHRSLR 74
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HPN+V K V ++ ++ME +GGEL+ R+ GRFSE EAR F QL+ V YCH
Sbjct: 75 HPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHS 134
Query: 161 IGVVHRDLKPENILLATKASSSP-IKLADFGLATYIEPGQSLLGTVGSPFYIAPEV-LAG 218
+ + HRDLK EN LL S +P +K+ DFG + TVG+P YIAPEV L
Sbjct: 135 MQICHRDLKLENTLL--DGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQ 192
Query: 219 GYN-QAADVWSAGVILYILLSGMPPFWGNTKSRIFDAV--RTADLRFPSNPWD-HISDSA 274
Y+ + ADVWS GV LY++L G PF + R + R +++ S P D IS
Sbjct: 193 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKY-SIPDDIRISPEC 251
Query: 275 KDLVMGMLSTDPSQRLTARQVLDHSW 300
L+ + DP+ R++ ++ HSW
Sbjct: 252 CHLISRIFVADPATRISIPEIKTHSW 277
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 97/269 (36%), Positives = 139/269 (51%), Gaps = 11/269 (4%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHP 102
+ L + +G G F +++ TG A K I K +L ++ + E+ IM L+ HP
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILN-HP 71
Query: 103 NVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIG 162
N+V L V E E ++L+ME +GGE+F L GR E EAR F Q++ V YCH+
Sbjct: 72 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR 131
Query: 163 VVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGGYNQ 222
+VHRDLK EN+LL + IK+ADFG + G L GSP Y APE+ G
Sbjct: 132 IVHRDLKAENLLLDADMN---IKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYD 188
Query: 223 A--ADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMG 280
DVWS GVILY L+SG PF G + + V R P ++S ++L+
Sbjct: 189 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKR 244
Query: 281 MLSTDPSQRLTARQVLDHSWMGDGIQDPE 309
L +P +R T Q++ W+ G ++ E
Sbjct: 245 FLVLNPIKRGTLEQIMKDRWINAGHEEDE 273
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 155 bits (391), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 142/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + K TG FA K + K ++V + E I+ ++ P +V
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME GGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 166 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 220
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFA 298
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 154 bits (390), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 143/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + K +G +A K + K ++V + E I+ ++ P +V
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 126
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME AGGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 186
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 187 DLKPENLLIDQQGY---IQVTDFGFAKRVKGATWTL--CGTPEYLAPEIILSKGYNKAVD 241
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 242 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 297
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 298 LTKRFGNLKNGVNDIKNHKWFA 319
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 154 bits (390), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 143/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + K +G +A K + K ++V + E I+ ++ P +V
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME AGGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 166 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXLA--GTPEYLAPEIILSKGYNKAVD 220
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFA 298
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 154 bits (390), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 142/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + K TG FA K + K ++V + E I+ ++ P +V
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME GGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 166 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 220
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 277 LTKRFGNLKDGVNDIKNHKWFA 298
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 154 bits (390), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 86/262 (32%), Positives = 142/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + K TG FA K + K ++V + E I+ ++ P +V
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME GGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 166 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 220
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 277 LTKRFGNLKDGVNDIKNHKWFA 298
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 154 bits (390), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 143/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + K +G +A K + K ++V + E I+ ++ P +V
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME AGGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 166 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXL--XGTPEYLAPEIILSKGYNKAVD 220
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 154 bits (389), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 96/269 (35%), Positives = 139/269 (51%), Gaps = 11/269 (4%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHP 102
+ L + +G G F +++ TG A K I K +L ++ + E+ IM L+ HP
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFR-EVRIMKILN-HP 74
Query: 103 NVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIG 162
N+V L V E E ++L+ME +GGE+F L GR E EAR F Q++ V YCH+
Sbjct: 75 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR 134
Query: 163 VVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGGYNQ 222
+VHRDLK EN+LL + IK+ADFG + G L G+P Y APE+ G
Sbjct: 135 IVHRDLKAENLLLDADMN---IKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYD 191
Query: 223 A--ADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMG 280
DVWS GVILY L+SG PF G + + V R P ++S ++L+
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKR 247
Query: 281 MLSTDPSQRLTARQVLDHSWMGDGIQDPE 309
L +P +R T Q++ W+ G ++ E
Sbjct: 248 FLVLNPIKRGTLEQIMKDRWINAGHEEDE 276
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 154 bits (389), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 143/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + K +G +A K + K ++V + E I+ ++ P +V
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME AGGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 166 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 220
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 221 WWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 142/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + K TG +A K + K ++V + E I+ ++ P +V
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 106
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME GGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+++ + IK+ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 167 DLKPENLMIDQQGY---IKVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 221
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWFA 299
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 143/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + K +G +A K + K ++V + E I+ ++ P +V
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME AGGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 166 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 220
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 277 LTKRFGNLPNGVNDIKNHKWFA 298
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 143/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + K +G +A K + K ++V + E I+ ++ P +V
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME AGGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 166 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 220
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 141/260 (54%), Gaps = 16/260 (6%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
LG G FG + + K TG +A K + K ++V + E I ++ P +V L+
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVN-FPFLVKLE 108
Query: 109 AVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDL 168
++D +++V+E GGE+F L + GRFSE AR Q++ Y H + +++RDL
Sbjct: 109 FSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDL 168
Query: 169 KPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAADVW 227
KPEN+L+ + IK+ADFG A ++ L G+P Y+APE +L+ GYN+A D W
Sbjct: 169 KPENLLIDQQGY---IKVADFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVDWW 223
Query: 228 SAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPS 287
+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D +
Sbjct: 224 ALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVDLT 279
Query: 288 QRL-----TARQVLDHSWMG 302
+R + +H W
Sbjct: 280 KRFGNLKNGVNDIKNHKWFA 299
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 143/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + K +G +A K + K ++V + E I+ ++ P +V
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME AGGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 166 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 220
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFA 298
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 143/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + K +G +A K + K ++V + E I+ ++ P +V
Sbjct: 48 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 106
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME AGGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 167 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 221
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWFA 299
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 143/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + K +G +A K + K ++V + E I+ ++ P +V
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME AGGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 166 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 220
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 142/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + K TG +A K + K ++V + E I+ ++ P +V
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 106
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME GGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 167 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 221
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 278 LTKRFGNLKNGVNDIXNHKWFA 299
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 143/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + K +G +A K + K ++V + E I+ ++ P +V
Sbjct: 34 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 92
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME AGGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 93 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 152
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 153 DLKPENLLIDEQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 207
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 208 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 263
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 264 LTKRFGNLKNGVNDIKNHKWFA 285
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 143/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + TG +A K + K ++V + + E I+ ++ P +V
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN-FPFLVK 105
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME GGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+++ + IK+ DFGLA ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 166 DLKPENLMIDQQGY---IKVTDFGLAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 220
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 142/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + K TG +A K + K ++V + E I+ ++ P +V
Sbjct: 68 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 126
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME GGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 127 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 186
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 187 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 241
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 242 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 297
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 298 LTKRFGNLKNGVNDIKNHKWFA 319
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 142/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + K TG +A K + K ++V + E I+ ++ P +V
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 106
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME GGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 167 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 221
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWFA 299
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 142/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + K TG +A K + K ++V + E I+ ++ P +V
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 106
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME GGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 167 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 221
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWFA 299
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 142/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + K TG +A K + K ++V + E I+ ++ P +V
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 98
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME GGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 158
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 159 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 213
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 214 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 269
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 270 LTKRFGNLKNGVNDIKNHKWFA 291
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 142/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ +G G FG + + TG +A K + K ++V + E I+ ++ P +V
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME GGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + IK+ADFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 166 DLKPENLLIDQQGY---IKVADFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 220
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFA 298
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 143/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + K +G +A K + K ++V + E I+ ++ P +V
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME AGGE+F L + GRF+E AR Q++ Y H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 166 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 220
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFA 298
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 142/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + TG +A K + K ++V + E I+ ++ P +V
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME AGGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 166 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 220
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 277 LTKRFGNLKDGVNDIKNHKWFA 298
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 142/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + K +G +A K + K ++V + E I+ ++ P +V
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME AGGE+F L + GRF E AR Q++ Y H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 166 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 220
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFA 298
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 142/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + K +G +A K + K ++V + E I+ ++ P +V
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME AGGE+F L + GRF E AR Q++ Y H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 166 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 220
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 143/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + K +G +A K + K ++V + E I+ ++ P +V
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME AGGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+++ + I++ DFG A ++ L G+P Y+APE +++ GYN+A D
Sbjct: 166 DLKPENLIIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIIISKGYNKAVD 220
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFA 298
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 142/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + K +G +A K + K ++V + E I+ ++ P +V
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 126
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME AGGE+F L + GRF E AR Q++ Y H + +++R
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 186
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 187 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 241
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 242 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 297
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 298 LTKRFGNLKNGVNDIKNHKWFA 319
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 142/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + K +G +A K + K ++V + E I+ ++ P +V
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME AGGE+F L + GRF E AR Q++ Y H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 166 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 220
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 142/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + K +G +A K + K ++V + E I+ ++ P +V
Sbjct: 42 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 100
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME AGGE+F L + GRF E AR Q++ Y H + +++R
Sbjct: 101 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 160
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 161 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 215
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 216 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 271
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 272 LTKRFGNLKNGVNDIKNHKWFA 293
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 143/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + TG +A K + K ++V + + E I+ ++ P +V
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN-FPFLVK 105
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME GGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+++ + I++ DFGLA ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 166 DLKPENLMIDQQGY---IQVTDFGLAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 220
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFA 298
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 100/277 (36%), Positives = 139/277 (50%), Gaps = 15/277 (5%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
I N R L + +G G F +++ TG+ A K I K +L + ++ + E+ I
Sbjct: 12 HIGNYR----LLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFR-EVRI 66
Query: 95 MTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
L+ HPN+V L V E E ++LV E +GGE+F L GR E EAR F Q++
Sbjct: 67 XKVLN-HPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSA 125
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
V YCH+ +VHRDLK EN+LL + IK+ADFG + G L G+P Y APE
Sbjct: 126 VQYCHQKFIVHRDLKAENLLLDADXN---IKIADFGFSNEFTFGNKLDAFCGAPPYAAPE 182
Query: 215 VLAGGYNQA--ADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
+ G DVWS GVILY L+SG PF G + + V R P + S
Sbjct: 183 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YXST 238
Query: 273 SAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPE 309
++L+ L +PS+R T Q+ W G +D E
Sbjct: 239 DCENLLKKFLILNPSKRGTLEQIXKDRWXNVGHEDDE 275
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 140/270 (51%), Gaps = 5/270 (1%)
Query: 36 ISNLRERFVL-GQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
+ N ++L ++LG G+F V+R C K TG+ +A K + K R D + EI +
Sbjct: 23 MENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQ-DCRAEILHEIAV 81
Query: 95 MTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRL--EKFGRFSEAEARVLFMQLM 152
+ P V++L VYE+ + L++E AGGE+F E SE + L Q++
Sbjct: 82 LELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQIL 141
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIA 212
+ V Y H+ +VH DLKP+NILL++ IK+ DFG++ I L +G+P Y+A
Sbjct: 142 EGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLA 201
Query: 213 PEVLAGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHIS 271
PE+L A D+W+ G+I Y+LL+ PF G + + ++ + + +S
Sbjct: 202 PEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVS 261
Query: 272 DSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
A D + +L +P +R TA L HSW+
Sbjct: 262 QLATDFIQSLLVKNPEKRPTAEICLSHSWL 291
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 142/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + K +G +A K + K ++V + E I+ ++ P +V
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME AGGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+AP +L+ GYN+A D
Sbjct: 166 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPAIILSKGYNKAVD 220
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFA 298
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 141/262 (53%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + TG +A K + K ++V + E I+ ++ P +V
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME GGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+++ + IK+ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 166 DLKPENLMIDQQGY---IKVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 220
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFA 298
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 141/262 (53%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + K TG +A K + K ++V + E I+ ++ P +V
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 98
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME GGE+F L + GRF E AR Q++ Y H + +++R
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 158
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 159 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 213
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 214 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 269
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 270 LTKRFGNLKNGVNDIKNHKWFA 291
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 87/257 (33%), Positives = 142/257 (55%), Gaps = 7/257 (2%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
LG G+FG + C + TG A K I K R + D+ VK EI +M +L H N++ L
Sbjct: 97 LGGGRFGQVHKCEETATGLKLAAK-IIKTR--GMKDKEEVKNEISVMNQLD-HANLIQLY 152
Query: 109 AVYEDEDYVHLVMELCAGGELFHRL-EKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRD 167
+E ++ + LVME GGELF R+ ++ +E + + Q+ + + + H++ ++H D
Sbjct: 153 DAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLD 212
Query: 168 LKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGGY-NQAADV 226
LKPENIL + + IK+ DFGLA +P + L G+P ++APEV+ + + D+
Sbjct: 213 LKPENILCVNR-DAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDM 271
Query: 227 WSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDP 286
WS GVI Y+LLSG+ PF G+ + + + + IS+ AK+ + +L +
Sbjct: 272 WSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEK 331
Query: 287 SQRLTARQVLDHSWMGD 303
S R++A + L H W+ D
Sbjct: 332 SWRISASEALKHPWLSD 348
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 142/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ +G G FG + + TG +A K + K ++V + E I+ ++ P +V
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME GG++F L + GRFSE AR Q++ Y H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + IK+ADFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 166 DLKPENLLIDQQGY---IKVADFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 220
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFA 298
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 142/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ +G G FG + + TG +A K + K ++V + E I+ ++ P +V
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME GG++F L + GRFSE AR Q++ Y H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + IK+ADFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 166 DLKPENLLIDQQGY---IKVADFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 220
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 151 bits (381), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 142/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + K +G +A K + K ++V + E I+ ++ P +V
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME AGGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 166 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 220
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 286 PSQRL-----TARQVLDHSWMG 302
++ + +H W
Sbjct: 277 LTKAFGNLKNGVNDIKNHKWFA 298
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 141/262 (53%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + TG +A K + K ++V + E I+ ++ P +V
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME GGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 166 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 220
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFA 298
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 141/262 (53%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + TG +A K + K ++V + E I+ ++ P +V
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME GGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 166 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 220
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 141/262 (53%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + TG +A K + K ++V + E I+ ++ P +V
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME GGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 166 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 220
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 277 LTKRFGNLKDGVNDIKNHKWFA 298
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 141/262 (53%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + TG +A K + K ++V + E I+ ++ P +V
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 106
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME GGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 167 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 221
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWFA 299
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/277 (36%), Positives = 142/277 (51%), Gaps = 15/277 (5%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
I N R L + +G G F +++ TG A K I K +L ++ + E+ I
Sbjct: 13 HIGNYR----LQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFR-EVRI 67
Query: 95 MTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
M ++ HPN+V L V E E ++LVME +GGE+F L GR E EAR F Q++
Sbjct: 68 M-KILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA 126
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
V YCH+ +VHRDLK EN+LL + IK+ADFG + G L GSP Y APE
Sbjct: 127 VQYCHQKYIVHRDLKAENLLLDGDMN---IKIADFGFSNEFTVGNKLDTFCGSPPYAAPE 183
Query: 215 VLAGGYNQA--ADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
+ G DVWS GVILY L+SG PF G + + V R P ++S
Sbjct: 184 LFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YMST 239
Query: 273 SAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPE 309
++L+ +L +P +R + Q++ WM G ++ E
Sbjct: 240 DCENLLKKLLVLNPIKRGSLEQIMKDRWMNVGHEEEE 276
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 141/262 (53%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + TG +A K + K ++V + E I+ ++ P +V
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 106
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME GGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 167 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWTL--CGTPEYLAPEIILSKGYNKAVD 221
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWFA 299
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 141/262 (53%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + TG +A K + K ++V + E I+ ++ P +V
Sbjct: 33 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 91
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME GGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 92 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 151
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 152 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWTL--CGTPEYLAPEIILSKGYNKAVD 206
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 207 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 262
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 263 LTKRFGNLKDGVNDIKNHKWFA 284
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 142/262 (54%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + K +G +A K + K ++V + E I+ ++ P +V
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME AGGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P +APE +L+ GYN+A D
Sbjct: 166 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEALAPEIILSKGYNKAVD 220
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 152/313 (48%), Gaps = 52/313 (16%)
Query: 39 LRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTID--DERSVKLEIEIMT 96
L++++ L +G G +GV+RV + T + A K + K+++ I+ D +K E+ +M
Sbjct: 24 LQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMK 83
Query: 97 RLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-----GR------------- 138
+L HPN+ L VYEDE Y+ LVMELC GG L +L F G+
Sbjct: 84 KLH-HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPC 142
Query: 139 --------------------FSEAEARV--LFMQLMQVVLYCHEIGVVHRDLKPENILLA 176
F + E + + Q+ + Y H G+ HRD+KPEN L +
Sbjct: 143 PECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFS 202
Query: 177 TKASSSPIKLADFGLAT---YIEPGQ--SLLGTVGSPFYIAPEVLAG---GYNQAADVWS 228
T S IKL DFGL+ + G+ + G+P+++APEVL Y D WS
Sbjct: 203 TNKSFE-IKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWS 261
Query: 229 AGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQ 288
AGV+L++LL G PF G + V L F + ++ +S A+DL+ +L+ + +
Sbjct: 262 AGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDE 321
Query: 289 RLTARQVLDHSWM 301
R A + L H W+
Sbjct: 322 RFDAMRALQHPWI 334
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 141/262 (53%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + TG +A K + K ++V + E I+ ++ P +V
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME GGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+++ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 166 DLKPENLMIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 220
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFA 298
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 140/262 (53%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + TG +A K + K ++V + E I+ ++ P +V
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME GGE+F L + GRF E AR Q++ Y H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+++ + IK+ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 166 DLKPENLMIDQQGY---IKVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 220
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFA 298
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 140/262 (53%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + TG +A K + K ++V + E I+ ++ P +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLTK 106
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME GGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+++ + IK+ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 167 DLKPENLMIDQQGY---IKVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 221
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWFA 299
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 140/262 (53%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + TG +A K + K ++V + E I+ ++ P +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLTK 106
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME GGE+F L + GRFSE AR Q++ Y H + +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+++ + IK+ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 167 DLKPENLMIDQQGY---IKVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 221
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWFA 299
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 140/262 (53%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + TG +A K + K ++V + E I+ ++ P +V
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME GGE+F L + GRF E AR Q++ Y H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 166 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 220
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFA 298
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 140/262 (53%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + TG +A K + K ++V + E I+ ++ P +V
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 106
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME GGE+F L + GRF E AR Q++ Y H + +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 167 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 221
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWFA 299
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/262 (31%), Positives = 140/262 (53%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + TG +A K + K ++V + E I+ ++ P +V
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLVK 105
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME GGE+F L + GRF E AR Q++ Y H + +++R
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+L+ + I++ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 166 DLKPENLLIDQQGY---IQVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 220
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 276
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 277 LTKRFGNLKNGVNDIKNHKWFA 298
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 140/267 (52%), Gaps = 11/267 (4%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHP 102
+++ + LG G FG +++ + T + A K I++ L D V+ EI + +L HP
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYL-KLLRHP 69
Query: 103 NVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIG 162
+++ L V + +V+E AGGELF + + R +E E R F Q++ + YCH
Sbjct: 70 HIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK 128
Query: 163 VVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGGYNQ 222
+VHRDLKPEN+LL + +K+ADFGL+ + G L + GSP Y APEV+ G
Sbjct: 129 IVHRDLKPENLLLDDNLN---VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYA 185
Query: 223 A--ADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMG 280
DVWS G++LY++L G PF +F V + P D +S A+ L+
Sbjct: 186 GPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMP----DFLSPGAQSLIRR 241
Query: 281 MLSTDPSQRLTARQVLDHSWMGDGIQD 307
M+ DP QR+T +++ W + D
Sbjct: 242 MIVADPMQRITIQEIRRDPWFNVNLPD 268
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 158/313 (50%), Gaps = 26/313 (8%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKD---RLVTIDDERSVKLEIEIMTRLS 99
F + + LG G FG + + + G +A K + K+ RL ++ +L + I+T
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT--- 64
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCH 159
HP ++ + ++D + ++M+ GGELF L K RF A+ ++ + Y H
Sbjct: 65 -HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLH 123
Query: 160 EIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG 219
+++RDLKPENILL IK+ DFG A Y+ L G+P YIAPEV++
Sbjct: 124 SKDIIYRDLKPENILLDKNGH---IKITDFGFAKYVPDVTYXL--CGTPDYIAPEVVSTK 178
Query: 220 -YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLV 278
YN++ D WS G+++Y +L+G PF+ + + ++ + A+LRFP ++ KDL+
Sbjct: 179 PYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP----FFNEDVKDLL 234
Query: 279 MGMLSTDPSQRLTARQ-----VLDHSWMGDGIQDPEKLSGNKIEDCKEWDLGSGSFSTQI 333
+++ D SQRL Q V +H W + + EKL IE E + G T
Sbjct: 235 SRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVW--EKLLSRNIETPYEPPIQQGQGDTSQ 292
Query: 334 IPR--NQDISFGT 344
+ +DI++G
Sbjct: 293 FDKYPEEDINYGV 305
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 139/262 (53%), Gaps = 16/262 (6%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG + + TG +A K + K ++V + E I+ ++ P +
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN-FPFLTK 106
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L+ ++D +++VME GGE+F L + GRF E AR Q++ Y H + +++R
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYR 166
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAAD 225
DLKPEN+++ + IK+ DFG A ++ L G+P Y+APE +L+ GYN+A D
Sbjct: 167 DLKPENLMIDQQGY---IKVTDFGFAKRVKGRTWXL--CGTPEYLAPEIILSKGYNKAVD 221
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ GV++Y + +G PPF+ + +I++ + + +RFPS H S KDL+ +L D
Sbjct: 222 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS----HFSSDLKDLLRNLLQVD 277
Query: 286 PSQRL-----TARQVLDHSWMG 302
++R + +H W
Sbjct: 278 LTKRFGNLKNGVNDIKNHKWFA 299
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 135/256 (52%), Gaps = 11/256 (4%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG +++ TG+ A K I K L D + ++ EI + RL HP+++
Sbjct: 20 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYL-RLLRHPHIIK 78
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L V + +D + +V+E AG ELF + + + SE EAR F Q++ V YCH +VHR
Sbjct: 79 LYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHR 137
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGGYNQA--A 224
DLKPEN+LL + +K+ADFGL+ + G L + GSP Y APEV++G
Sbjct: 138 DLKPENLLLDEHLN---VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEV 194
Query: 225 DVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLST 284
DVWS GVILY++L PF + +F + P +S A L+ ML
Sbjct: 195 DVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKRMLIV 250
Query: 285 DPSQRLTARQVLDHSW 300
+P R++ +++ W
Sbjct: 251 NPLNRISIHEIMQDDW 266
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 135/256 (52%), Gaps = 11/256 (4%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG +++ TG+ A K I K L D + ++ EI + RL HP+++
Sbjct: 19 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYL-RLLRHPHIIK 77
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L V + +D + +V+E AG ELF + + + SE EAR F Q++ V YCH +VHR
Sbjct: 78 LYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHR 136
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGGYNQA--A 224
DLKPEN+LL + +K+ADFGL+ + G L + GSP Y APEV++G
Sbjct: 137 DLKPENLLLDEHLN---VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEV 193
Query: 225 DVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLST 284
DVWS GVILY++L PF + +F + P +S A L+ ML
Sbjct: 194 DVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKRMLIV 249
Query: 285 DPSQRLTARQVLDHSW 300
+P R++ +++ W
Sbjct: 250 NPLNRISIHEIMQDDW 265
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 135/256 (52%), Gaps = 11/256 (4%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG +++ TG+ A K I K L D + ++ EI + RL HP+++
Sbjct: 10 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYL-RLLRHPHIIK 68
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L V + +D + +V+E AG ELF + + + SE EAR F Q++ V YCH +VHR
Sbjct: 69 LYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHR 127
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGGYNQA--A 224
DLKPEN+LL + +K+ADFGL+ + G L + GSP Y APEV++G
Sbjct: 128 DLKPENLLLDEHLN---VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEV 184
Query: 225 DVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLST 284
DVWS GVILY++L PF + +F + P +S A L+ ML
Sbjct: 185 DVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKRMLIV 240
Query: 285 DPSQRLTARQVLDHSW 300
+P R++ +++ W
Sbjct: 241 NPLNRISIHEIMQDDW 256
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 135/256 (52%), Gaps = 11/256 (4%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ LG G FG +++ TG+ A K I K L D + ++ EI + RL HP+++
Sbjct: 14 KTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYL-RLLRHPHIIK 72
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L V + +D + +V+E AG ELF + + + SE EAR F Q++ V YCH +VHR
Sbjct: 73 LYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHR 131
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGGYNQA--A 224
DLKPEN+LL + +K+ADFGL+ + G L + GSP Y APEV++G
Sbjct: 132 DLKPENLLLDEHLN---VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEV 188
Query: 225 DVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLST 284
DVWS GVILY++L PF + +F + P +S A L+ ML
Sbjct: 189 DVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPK----FLSPGAAGLIKRMLIV 244
Query: 285 DPSQRLTARQVLDHSW 300
+P R++ +++ W
Sbjct: 245 NPLNRISIHEIMQDDW 260
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 146/297 (49%), Gaps = 49/297 (16%)
Query: 44 VLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPN 103
V Q LG G G + +K T E FA K + D + E+E+ R S P+
Sbjct: 21 VTSQVLGLGINGKVLQIFNKRTQEKFALK--------MLQDCPKARREVELHWRASQCPH 72
Query: 104 VVDLKAVYED----EDYVHLVMELCAGGELFHRLEKFG--RFSEAEARVLFMQLMQVVLY 157
+V + VYE+ + +VME GGELF R++ G F+E EA + + + + Y
Sbjct: 73 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 132
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLA 217
H I + HRD+KPEN+L +K ++ +KL DFG A E
Sbjct: 133 LHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--------------------ETTG 172
Query: 218 GGYNQAADVWSAGVILYILLSGMPPFWGN--------TKSRIFDAVRTADLRFPSNPWDH 269
Y+++ D+WS GVI+YILL G PPF+ N K+RI R FP+ W
Sbjct: 173 EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI----RMGQYEFPNPEWSE 228
Query: 270 ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPEK-LSGNKI--EDCKEWD 323
+S+ K L+ +L T+P+QR+T + ++H W+ + P+ L +++ ED + W+
Sbjct: 229 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWE 285
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 152/305 (49%), Gaps = 19/305 (6%)
Query: 7 SNSSSEPSRQPC-----KCYRVRSLAETILDTNQISNLRERFVLGQQLGWGQFGVIRVCS 61
S + ++PS +P K ++ + + ++D + +R++ G+ LG G F +
Sbjct: 7 SAAIAKPSAKPSAHVDPKSAPLKEIPDVLVDPRTM----KRYMRGRFLGKGGFAKCYEIT 62
Query: 62 DKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVM 121
D T EVFA K + K L+ + + EI I L +P+VV +ED+D+V++V+
Sbjct: 63 DMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD-NPHVVGFHGFFEDDDFVYVVL 121
Query: 122 ELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASS 181
E+C L ++ +E EAR Q +Q V Y H V+HRDLK N+ L
Sbjct: 122 EICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD- 180
Query: 182 SPIKLADFGLATYIE-PGQSLLGTVGSPFYIAPEVLA-GGYNQAADVWSAGVILYILLSG 239
+K+ DFGLAT IE G+ G+P YIAPEVL G++ D+WS G ILY LL G
Sbjct: 181 --VKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 238
Query: 240 MPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHS 299
PPF + + ++ + P HI+ A L+ ML DP+ R + ++L
Sbjct: 239 KPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIRRMLHADPTLRPSVAELLTDE 294
Query: 300 WMGDG 304
+ G
Sbjct: 295 FFTSG 299
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 152/305 (49%), Gaps = 19/305 (6%)
Query: 7 SNSSSEPSRQPC-----KCYRVRSLAETILDTNQISNLRERFVLGQQLGWGQFGVIRVCS 61
S + ++PS +P K ++ + + ++D + +R++ G+ LG G F +
Sbjct: 7 SAAIAKPSAKPSAHVDPKSAPLKEIPDVLVDPRTM----KRYMRGRFLGKGGFAKCYEIT 62
Query: 62 DKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVM 121
D T EVFA K + K L+ + + EI I L +P+VV +ED+D+V++V+
Sbjct: 63 DMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD-NPHVVGFHGFFEDDDFVYVVL 121
Query: 122 ELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASS 181
E+C L ++ +E EAR Q +Q V Y H V+HRDLK N+ L
Sbjct: 122 EICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD- 180
Query: 182 SPIKLADFGLATYIE-PGQSLLGTVGSPFYIAPEVLA-GGYNQAADVWSAGVILYILLSG 239
+K+ DFGLAT IE G+ G+P YIAPEVL G++ D+WS G ILY LL G
Sbjct: 181 --VKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 238
Query: 240 MPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHS 299
PPF + + ++ + P HI+ A L+ ML DP+ R + ++L
Sbjct: 239 KPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIRRMLHADPTLRPSVAELLTDE 294
Query: 300 WMGDG 304
+ G
Sbjct: 295 FFTSG 299
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 152/305 (49%), Gaps = 19/305 (6%)
Query: 7 SNSSSEPSRQPC-----KCYRVRSLAETILDTNQISNLRERFVLGQQLGWGQFGVIRVCS 61
S + ++PS +P K ++ + + ++D + +R++ G+ LG G F +
Sbjct: 7 SAAIAKPSAKPSAHVDPKSAPLKEIPDVLVDPRTM----KRYMRGRFLGKGGFAKCYEIT 62
Query: 62 DKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVM 121
D T EVFA K + K L+ + + EI I L +P+VV +ED+D+V++V+
Sbjct: 63 DMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD-NPHVVGFHGFFEDDDFVYVVL 121
Query: 122 ELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASS 181
E+C L ++ +E EAR Q +Q V Y H V+HRDLK N+ L
Sbjct: 122 EICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD- 180
Query: 182 SPIKLADFGLATYIE-PGQSLLGTVGSPFYIAPEVLA-GGYNQAADVWSAGVILYILLSG 239
+K+ DFGLAT IE G+ G+P YIAPEVL G++ D+WS G ILY LL G
Sbjct: 181 --VKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVG 238
Query: 240 MPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHS 299
PPF + + ++ + P HI+ A L+ ML DP+ R + ++L
Sbjct: 239 KPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIRRMLHADPTLRPSVAELLTDE 294
Query: 300 WMGDG 304
+ G
Sbjct: 295 FFTSG 299
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 136/260 (52%), Gaps = 15/260 (5%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
LG G FG + + +K TG +A K + K+ ++ D+ E ++ + HP + LK
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALK 71
Query: 109 AVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDL 168
++ D + VME GGELF L + F+E AR +++ + Y H VV+RD+
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 169 KPENILLATKASSSPIKLADFGLATY-IEPGQSLLGTVGSPFYIAPEVLA-GGYNQAADV 226
K EN++L IK+ DFGL I G ++ G+P Y+APEVL Y +A D
Sbjct: 132 KLENLMLDKDGH---IKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDW 188
Query: 227 WSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDP 286
W GV++Y ++ G PF+ R+F+ + ++RFP +S AK L+ G+L DP
Sbjct: 189 WGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLLAGLLKKDP 244
Query: 287 SQRL-----TARQVLDHSWM 301
QRL A++V++H +
Sbjct: 245 KQRLGGGPSDAKEVMEHRFF 264
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 136/260 (52%), Gaps = 15/260 (5%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
LG G FG + + +K TG +A K + K+ ++ D+ E ++ + HP + LK
Sbjct: 16 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALK 74
Query: 109 AVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDL 168
++ D + VME GGELF L + F+E AR +++ + Y H VV+RD+
Sbjct: 75 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 134
Query: 169 KPENILLATKASSSPIKLADFGLATY-IEPGQSLLGTVGSPFYIAPEVLA-GGYNQAADV 226
K EN++L IK+ DFGL I G ++ G+P Y+APEVL Y +A D
Sbjct: 135 KLENLMLDKDGH---IKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDW 191
Query: 227 WSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDP 286
W GV++Y ++ G PF+ R+F+ + ++RFP +S AK L+ G+L DP
Sbjct: 192 WGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLLAGLLKKDP 247
Query: 287 SQRL-----TARQVLDHSWM 301
QRL A++V++H +
Sbjct: 248 KQRLGGGPSDAKEVMEHRFF 267
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 136/260 (52%), Gaps = 15/260 (5%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
LG G FG + + +K TG +A K + K+ ++ D+ E ++ + HP + LK
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALK 71
Query: 109 AVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDL 168
++ D + VME GGELF L + F+E AR +++ + Y H VV+RD+
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 169 KPENILLATKASSSPIKLADFGLATY-IEPGQSLLGTVGSPFYIAPEVLA-GGYNQAADV 226
K EN++L IK+ DFGL I G ++ G+P Y+APEVL Y +A D
Sbjct: 132 KLENLMLDKDGH---IKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDW 188
Query: 227 WSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDP 286
W GV++Y ++ G PF+ R+F+ + ++RFP +S AK L+ G+L DP
Sbjct: 189 WGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLLAGLLKKDP 244
Query: 287 SQRL-----TARQVLDHSWM 301
QRL A++V++H +
Sbjct: 245 KQRLGGGPSDAKEVMEHRFF 264
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 144 bits (364), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 136/260 (52%), Gaps = 15/260 (5%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
LG G FG + + +K TG +A K + K+ ++ D+ E ++ + HP + LK
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALK 71
Query: 109 AVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDL 168
++ D + VME GGELF L + F+E AR +++ + Y H VV+RD+
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 169 KPENILLATKASSSPIKLADFGLATY-IEPGQSLLGTVGSPFYIAPEVLA-GGYNQAADV 226
K EN++L IK+ DFGL I G ++ G+P Y+APEVL Y +A D
Sbjct: 132 KLENLMLDKDGH---IKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDW 188
Query: 227 WSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDP 286
W GV++Y ++ G PF+ R+F+ + ++RFP +S AK L+ G+L DP
Sbjct: 189 WGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLLAGLLKKDP 244
Query: 287 SQRL-----TARQVLDHSWM 301
QRL A++V++H +
Sbjct: 245 KQRLGGGPSDAKEVMEHRFF 264
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 144 bits (364), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 136/260 (52%), Gaps = 15/260 (5%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
LG G FG + + +K TG +A K + K+ ++ D+ E ++ + HP + LK
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALK 71
Query: 109 AVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDL 168
++ D + VME GGELF L + F+E AR +++ + Y H VV+RD+
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 169 KPENILLATKASSSPIKLADFGLATY-IEPGQSLLGTVGSPFYIAPEVLA-GGYNQAADV 226
K EN++L IK+ DFGL I G ++ G+P Y+APEVL Y +A D
Sbjct: 132 KLENLMLDKDGH---IKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDW 188
Query: 227 WSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDP 286
W GV++Y ++ G PF+ R+F+ + ++RFP +S AK L+ G+L DP
Sbjct: 189 WGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLLAGLLKKDP 244
Query: 287 SQRL-----TARQVLDHSWM 301
QRL A++V++H +
Sbjct: 245 KQRLGGGPSDAKEVMEHRFF 264
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 144 bits (363), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 136/260 (52%), Gaps = 15/260 (5%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
LG G FG + + +K TG +A K + K+ ++ D+ E ++ + HP + LK
Sbjct: 13 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALK 71
Query: 109 AVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDL 168
++ D + VME GGELF L + F+E AR +++ + Y H VV+RD+
Sbjct: 72 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 131
Query: 169 KPENILLATKASSSPIKLADFGLATY-IEPGQSLLGTVGSPFYIAPEVLA-GGYNQAADV 226
K EN++L IK+ DFGL I G ++ G+P Y+APEVL Y +A D
Sbjct: 132 KLENLMLDKDGH---IKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDW 188
Query: 227 WSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDP 286
W GV++Y ++ G PF+ R+F+ + ++RFP +S AK L+ G+L DP
Sbjct: 189 WGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLLAGLLKKDP 244
Query: 287 SQRL-----TARQVLDHSWM 301
QRL A++V++H +
Sbjct: 245 KQRLGGGPSDAKEVMEHRFF 264
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/260 (33%), Positives = 136/260 (52%), Gaps = 15/260 (5%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
LG G FG + + +K TG +A K + K+ ++ D+ E ++ + HP + LK
Sbjct: 18 LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTALK 76
Query: 109 AVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDL 168
++ D + VME GGELF L + F+E AR +++ + Y H VV+RD+
Sbjct: 77 YAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDI 136
Query: 169 KPENILLATKASSSPIKLADFGLATY-IEPGQSLLGTVGSPFYIAPEVLA-GGYNQAADV 226
K EN++L IK+ DFGL I G ++ G+P Y+APEVL Y +A D
Sbjct: 137 KLENLMLDKDGH---IKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDW 193
Query: 227 WSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDP 286
W GV++Y ++ G PF+ R+F+ + ++RFP +S AK L+ G+L DP
Sbjct: 194 WGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRT----LSPEAKSLLAGLLKKDP 249
Query: 287 SQRL-----TARQVLDHSWM 301
QRL A++V++H +
Sbjct: 250 KQRLGGGPSDAKEVMEHRFF 269
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/296 (32%), Positives = 146/296 (49%), Gaps = 19/296 (6%)
Query: 11 SEPSRQPCKCYRVRSLAETILDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFA 70
S+P P K + + ++D + +R++ G+ LG G F +D T EVFA
Sbjct: 5 SDPKSAPLK-----EIPDVLVDPRTM----KRYMRGRFLGKGGFAKCYEITDMDTKEVFA 55
Query: 71 CKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELF 130
K + K L+ + + EI I L +P+VV +ED+D+V++V+E+C L
Sbjct: 56 GKVVPKSMLLKPHQKEKMSTEIAIHKSLD-NPHVVGFHGFFEDDDFVYVVLEICRRRSLL 114
Query: 131 HRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFG 190
++ +E EAR Q +Q V Y H V+HRDLK N+ L +K+ DFG
Sbjct: 115 ELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMD---VKIGDFG 171
Query: 191 LATYIE-PGQSLLGTVGSPFYIAPEVLA-GGYNQAADVWSAGVILYILLSGMPPFWGNTK 248
LAT IE G+ G+P YIAPEVL G++ D+WS G ILY LL G PPF +
Sbjct: 172 LATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCL 231
Query: 249 SRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ + P HI+ A L+ ML DP+ R + ++L + G
Sbjct: 232 KETYIRIKKNEYSVPR----HINPVASALIRRMLHADPTLRPSVAELLTDEFFTSG 283
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 84/260 (32%), Positives = 138/260 (53%), Gaps = 10/260 (3%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHP 102
F +G+ LG G+FG + + +K + + A K + K ++ E ++ EIEI L HP
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH-HP 83
Query: 103 NVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIG 162
N++ L + D ++L++E GEL+ L+K F E + +L ++YCH
Sbjct: 84 NILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKK 143
Query: 163 VVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG-YN 221
V+HRD+KPEN+LL K +ADFG + + P G+ Y+ PE++ G +N
Sbjct: 144 VIHRDIKPENLLLGLKGELK---IADFGWSVH-APSLRRKTMCGTLDYLPPEMIEGRMHN 199
Query: 222 QAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGM 281
+ D+W GV+ Y LL G PPF + + + + DL+FP++ + A+DL+ +
Sbjct: 200 EKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPAS----VPTGAQDLISKL 255
Query: 282 LSTDPSQRLTARQVLDHSWM 301
L +PS+RL QV H W+
Sbjct: 256 LRHNPSERLPLAQVSAHPWV 275
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 138/274 (50%), Gaps = 14/274 (5%)
Query: 39 LRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRL 98
L + + L + +G G F +++ TGE+ A K + K+ L + D +K EIE + L
Sbjct: 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGS--DLPRIKTEIEALKNL 65
Query: 99 SGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYC 158
H ++ L V E + + +V+E C GGELF + R SE E RV+F Q++ V Y
Sbjct: 66 R-HQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYV 124
Query: 159 HEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQ--SLLGTVGSPFYIAPEVL 216
H G HRDLKPEN+L +KL DFGL + + L GS Y APE++
Sbjct: 125 HSQGYAHRDLKPENLLF---DEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELI 181
Query: 217 AGG--YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSA 274
G ADVWS G++LY+L+ G PF + ++ + P W +S S+
Sbjct: 182 QGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPK--W--LSPSS 237
Query: 275 KDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
L+ ML DP +R++ + +L+H W+ P
Sbjct: 238 ILLLQQMLQVDPKKRISMKNLLNHPWIMQDYNYP 271
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 136/262 (51%), Gaps = 16/262 (6%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
LG G FG + + +K TG +A K + K+ +V D+ E ++ S HP + LK
Sbjct: 159 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALK 217
Query: 109 AVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCH-EIGVVHRD 167
++ D + VME GGELF L + FSE AR +++ + Y H E VV+RD
Sbjct: 218 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRD 277
Query: 168 LKPENILLATKASSSPIKLADFGLATY-IEPGQSLLGTVGSPFYIAPEVLA-GGYNQAAD 225
LK EN++L IK+ DFGL I+ G ++ G+P Y+APEVL Y +A D
Sbjct: 278 LKLENLMLDKDGH---IKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVD 334
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W GV++Y ++ G PF+ ++F+ + ++RFP + AK L+ G+L D
Sbjct: 335 WWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LGPEAKSLLSGLLKKD 390
Query: 286 PSQRL-----TARQVLDHSWMG 302
P QRL A++++ H +
Sbjct: 391 PKQRLGGGSEDAKEIMQHRFFA 412
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 136/262 (51%), Gaps = 16/262 (6%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
LG G FG + + +K TG +A K + K+ +V D+ E ++ S HP + LK
Sbjct: 16 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALK 74
Query: 109 AVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCH-EIGVVHRD 167
++ D + VME GGELF L + FSE AR +++ + Y H E VV+RD
Sbjct: 75 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRD 134
Query: 168 LKPENILLATKASSSPIKLADFGLATY-IEPGQSLLGTVGSPFYIAPEVLA-GGYNQAAD 225
LK EN++L IK+ DFGL I+ G ++ G+P Y+APEVL Y +A D
Sbjct: 135 LKLENLMLDKDGH---IKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVD 191
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W GV++Y ++ G PF+ ++F+ + ++RFP + AK L+ G+L D
Sbjct: 192 WWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LGPEAKSLLSGLLKKD 247
Query: 286 PSQRL-----TARQVLDHSWMG 302
P QRL A++++ H +
Sbjct: 248 PKQRLGGGSEDAKEIMQHRFFA 269
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 136/262 (51%), Gaps = 16/262 (6%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
LG G FG + + +K TG +A K + K+ +V D+ E ++ S HP + LK
Sbjct: 18 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALK 76
Query: 109 AVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCH-EIGVVHRD 167
++ D + VME GGELF L + FSE AR +++ + Y H E VV+RD
Sbjct: 77 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRD 136
Query: 168 LKPENILLATKASSSPIKLADFGLATY-IEPGQSLLGTVGSPFYIAPEVLA-GGYNQAAD 225
LK EN++L IK+ DFGL I+ G ++ G+P Y+APEVL Y +A D
Sbjct: 137 LKLENLMLDKDGH---IKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVD 193
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W GV++Y ++ G PF+ ++F+ + ++RFP + AK L+ G+L D
Sbjct: 194 WWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LGPEAKSLLSGLLKKD 249
Query: 286 PSQRL-----TARQVLDHSWMG 302
P QRL A++++ H +
Sbjct: 250 PKQRLGGGSEDAKEIMQHRFFA 271
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 136/262 (51%), Gaps = 16/262 (6%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
LG G FG + + +K TG +A K + K+ +V D+ E ++ S HP + LK
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALK 214
Query: 109 AVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCH-EIGVVHRD 167
++ D + VME GGELF L + FSE AR +++ + Y H E VV+RD
Sbjct: 215 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRD 274
Query: 168 LKPENILLATKASSSPIKLADFGLATY-IEPGQSLLGTVGSPFYIAPEVLA-GGYNQAAD 225
LK EN++L IK+ DFGL I+ G ++ G+P Y+APEVL Y +A D
Sbjct: 275 LKLENLMLDKDGH---IKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVD 331
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W GV++Y ++ G PF+ ++F+ + ++RFP + AK L+ G+L D
Sbjct: 332 WWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LGPEAKSLLSGLLKKD 387
Query: 286 PSQRL-----TARQVLDHSWMG 302
P QRL A++++ H +
Sbjct: 388 PKQRLGGGSEDAKEIMQHRFFA 409
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/262 (33%), Positives = 136/262 (51%), Gaps = 16/262 (6%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
LG G FG + + +K TG +A K + K+ +V D+ E ++ S HP + LK
Sbjct: 17 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTALK 75
Query: 109 AVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCH-EIGVVHRD 167
++ D + VME GGELF L + FSE AR +++ + Y H E VV+RD
Sbjct: 76 YSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRD 135
Query: 168 LKPENILLATKASSSPIKLADFGLATY-IEPGQSLLGTVGSPFYIAPEVLA-GGYNQAAD 225
LK EN++L IK+ DFGL I+ G ++ G+P Y+APEVL Y +A D
Sbjct: 136 LKLENLMLDKDGH---IKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVD 192
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W GV++Y ++ G PF+ ++F+ + ++RFP + AK L+ G+L D
Sbjct: 193 WWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LGPEAKSLLSGLLKKD 248
Query: 286 PSQRL-----TARQVLDHSWMG 302
P QRL A++++ H +
Sbjct: 249 PKQRLGGGSEDAKEIMQHRFFA 270
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 129/258 (50%), Gaps = 10/258 (3%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
LG G F SD T EVFA K + K L+ + +EI I L+ H +VV
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFH 87
Query: 109 AVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDL 168
+ED D+V +V+ELC L ++ +E EAR Q++ Y H V+HRDL
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 147
Query: 169 KPENILLATKASSSPIKLADFGLATYIE-PGQSLLGTVGSPFYIAPEVLA-GGYNQAADV 226
K N+ L +K+ DFGLAT +E G+ G+P YIAPEVL+ G++ DV
Sbjct: 148 KLGNLFLNEDLE---VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDV 204
Query: 227 WSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDP 286
WS G I+Y LL G PPF + + ++ + P HI+ A L+ ML TDP
Sbjct: 205 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 260
Query: 287 SQRLTARQVLDHSWMGDG 304
+ R T ++L+ + G
Sbjct: 261 TARPTINELLNDEFFTSG 278
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 129/258 (50%), Gaps = 10/258 (3%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
LG G F SD T EVFA K + K L+ + +EI I L+ H +VV
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFH 83
Query: 109 AVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDL 168
+ED D+V +V+ELC L ++ +E EAR Q++ Y H V+HRDL
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 169 KPENILLATKASSSPIKLADFGLATYIE-PGQSLLGTVGSPFYIAPEVLA-GGYNQAADV 226
K N+ L +K+ DFGLAT +E G+ G+P YIAPEVL+ G++ DV
Sbjct: 144 KLGNLFLNEDLE---VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDV 200
Query: 227 WSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDP 286
WS G I+Y LL G PPF + + ++ + P HI+ A L+ ML TDP
Sbjct: 201 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 256
Query: 287 SQRLTARQVLDHSWMGDG 304
+ R T ++L+ + G
Sbjct: 257 TARPTINELLNDEFFTSG 274
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 129/258 (50%), Gaps = 10/258 (3%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
LG G F SD T EVFA K + K L+ + +EI I L+ H +VV
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFH 83
Query: 109 AVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDL 168
+ED D+V +V+ELC L ++ +E EAR Q++ Y H V+HRDL
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 169 KPENILLATKASSSPIKLADFGLATYIE-PGQSLLGTVGSPFYIAPEVLA-GGYNQAADV 226
K N+ L +K+ DFGLAT +E G+ G+P YIAPEVL+ G++ DV
Sbjct: 144 KLGNLFLNEDLE---VKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDV 200
Query: 227 WSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDP 286
WS G I+Y LL G PPF + + ++ + P HI+ A L+ ML TDP
Sbjct: 201 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 256
Query: 287 SQRLTARQVLDHSWMGDG 304
+ R T ++L+ + G
Sbjct: 257 TARPTINELLNDEFFTSG 274
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 141 bits (355), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 129/258 (50%), Gaps = 10/258 (3%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
LG G F SD T EVFA K + K L+ + +EI I L+ H +VV
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFH 107
Query: 109 AVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDL 168
+ED D+V +V+ELC L ++ +E EAR Q++ Y H V+HRDL
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 167
Query: 169 KPENILLATKASSSPIKLADFGLATYIE-PGQSLLGTVGSPFYIAPEVLA-GGYNQAADV 226
K N+ L +K+ DFGLAT +E G+ G+P YIAPEVL+ G++ DV
Sbjct: 168 KLGNLFLNEDLE---VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDV 224
Query: 227 WSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDP 286
WS G I+Y LL G PPF + + ++ + P HI+ A L+ ML TDP
Sbjct: 225 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 280
Query: 287 SQRLTARQVLDHSWMGDG 304
+ R T ++L+ + G
Sbjct: 281 TARPTINELLNDEFFTSG 298
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 129/258 (50%), Gaps = 10/258 (3%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
LG G F SD T EVFA K + K L+ + +EI I L+ H +VV
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFH 105
Query: 109 AVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDL 168
+ED D+V +V+ELC L ++ +E EAR Q++ Y H V+HRDL
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 165
Query: 169 KPENILLATKASSSPIKLADFGLATYIE-PGQSLLGTVGSPFYIAPEVLA-GGYNQAADV 226
K N+ L +K+ DFGLAT +E G+ G+P YIAPEVL+ G++ DV
Sbjct: 166 KLGNLFLNEDLE---VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDV 222
Query: 227 WSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDP 286
WS G I+Y LL G PPF + + ++ + P HI+ A L+ ML TDP
Sbjct: 223 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 278
Query: 287 SQRLTARQVLDHSWMGDG 304
+ R T ++L+ + G
Sbjct: 279 TARPTINELLNDEFFTSG 296
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 168/331 (50%), Gaps = 29/331 (8%)
Query: 32 DTNQISNLRER-----FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDER 86
D Q SN +R F LG G FG + + K T E++A K + KD ++ DD
Sbjct: 5 DRKQPSNNLDRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVE 64
Query: 87 SVKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARV 146
+E ++ L P + L + ++ D ++ VME GG+L + +++ G+F E +A
Sbjct: 65 CTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVF 124
Query: 147 LFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLAT-YIEPGQSLLGTV 205
++ + + H+ G+++RDLK +N++L ++ IK+ADFG+ ++ G +
Sbjct: 125 YAAEISIGLFFLHKRGIIYRDLKLDNVMLDSEGH---IKIADFGMCKEHMMDGVTTREFC 181
Query: 206 GSPFYIAPEVLA-GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPS 264
G+P YIAPE++A Y ++ D W+ GV+LY +L+G PPF G + +F ++ ++ +P
Sbjct: 182 GTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK 241
Query: 265 NPWDHISDSAKDLVMGMLSTDPSQRLTA-----RQVLDHSWMGDGIQDPEKLSGNKIE-D 318
+ +S A + G+++ P++RL R V +H++ D EKL +I+
Sbjct: 242 S----LSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRR--IDWEKLENREIQPP 295
Query: 319 CKEWDLGSGSFSTQIIPRNQDISFGTGSPVF 349
K G G+ N D F G PV
Sbjct: 296 FKPKVCGKGA-------ENFDKFFTRGQPVL 319
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 129/258 (50%), Gaps = 10/258 (3%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
LG G F SD T EVFA K + K L+ + +EI I L+ H +VV
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGFH 81
Query: 109 AVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDL 168
+ED D+V +V+ELC L ++ +E EAR Q++ Y H V+HRDL
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 141
Query: 169 KPENILLATKASSSPIKLADFGLATYIE-PGQSLLGTVGSPFYIAPEVLA-GGYNQAADV 226
K N+ L +K+ DFGLAT +E G+ G+P YIAPEVL+ G++ DV
Sbjct: 142 KLGNLFLNEDLE---VKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDV 198
Query: 227 WSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDP 286
WS G I+Y LL G PPF + + ++ + P HI+ A L+ ML TDP
Sbjct: 199 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK----HINPVAASLIQKMLQTDP 254
Query: 287 SQRLTARQVLDHSWMGDG 304
+ R T ++L+ + G
Sbjct: 255 TARPTINELLNDEFFTSG 272
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/253 (31%), Positives = 134/253 (52%), Gaps = 9/253 (3%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHP 102
F + +G G FG + + K +A K + K ++ +E+ + E ++ + HP
Sbjct: 40 FHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHP 99
Query: 103 NVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIG 162
+V L ++ D ++ V++ GGELF+ L++ F E AR ++ + Y H +
Sbjct: 100 FLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLN 159
Query: 163 VVHRDLKPENILLATKASSSPIKLADFGLAT-YIEPGQSLLGTVGSPFYIAPEVLAGG-Y 220
+V+RDLKPENILL ++ I L DFGL IE + G+P Y+APEVL Y
Sbjct: 160 IVYRDLKPENILLDSQGH---IVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPY 216
Query: 221 NQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMG 280
++ D W G +LY +L G+PPF+ + ++D + L+ N I++SA+ L+ G
Sbjct: 217 DRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPN----ITNSARHLLEG 272
Query: 281 MLSTDPSQRLTAR 293
+L D ++RL A+
Sbjct: 273 LLQKDRTKRLGAK 285
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 146/284 (51%), Gaps = 11/284 (3%)
Query: 39 LRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRL 98
L E++++ + LG G+FG++ C + + + + K + V D+ VK EI I+ +
Sbjct: 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVK----VKGTDQVLVKKEISILN-I 57
Query: 99 SGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFG-RFSEAEARVLFMQLMQVVLY 157
+ H N++ L +E + + ++ E +G ++F R+ +E E Q+ + + +
Sbjct: 58 ARHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQF 117
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLA 217
H + H D++PENI+ T+ SS+ IK+ +FG A ++PG + +P Y APEV
Sbjct: 118 LHSHNIGHFDIRPENIIYQTRRSST-IKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQ 176
Query: 218 GGY-NQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKD 276
+ A D+WS G ++Y+LLSG+ PF T +I + + A+ F + IS A D
Sbjct: 177 HDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMD 236
Query: 277 LVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPEKLSGNKIEDCK 320
V +L + R+TA + L H W+ I E++S I K
Sbjct: 237 FVDRLLVKERKSRMTASEALQHPWLKQKI---ERVSTKVIRTLK 277
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 140/266 (52%), Gaps = 19/266 (7%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
QI E F+L + LG G FG + + K T + FA K++ KD ++ DD +E +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 95 MTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
++ HP + + ++ ++ + VME GG+L + ++ +F + A +++
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG 130
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTV------GSP 208
+ + H G+V+RDLK +NILL IK+ADFG+ +++LG G+P
Sbjct: 131 LQFLHSKGIVYRDLKLDNILLDKDGH---IKIADFGMCK-----ENMLGDAKTNXFCGTP 182
Query: 209 FYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPW 267
YIAPE+L G YN + D WS GV+LY +L G PF G + +F ++R + +P W
Sbjct: 183 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR--W 240
Query: 268 DHISDSAKDLVMGMLSTDPSQRLTAR 293
+ AKDL++ + +P +RL R
Sbjct: 241 --LEKEAKDLLVKLFVREPEKRLGVR 264
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 136/252 (53%), Gaps = 12/252 (4%)
Query: 44 VLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLV-TIDDERSVKLEIEIMTRLSGHP 102
VLG+ G+G+ +R + TG++FA K + K +V D K E I+ + HP
Sbjct: 24 VLGKG-GYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK-HP 81
Query: 103 NVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIG 162
+VDL ++ ++L++E +GGELF +LE+ G F E A ++ + + H+ G
Sbjct: 82 FIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 163 VVHRDLKPENILLATKASSSPIKLADFGLATY-IEPGQSLLGTVGSPFYIAPEVLA-GGY 220
+++RDLKPENI+L + +KL DFGL I G G+ Y+APE+L G+
Sbjct: 142 IIYRDLKPENIMLNHQGH---VKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGH 198
Query: 221 NQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMG 280
N+A D WS G ++Y +L+G PPF G + + D + L P +++ A+DL+
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP----YLTQEARDLLKK 254
Query: 281 MLSTDPSQRLTA 292
+L + + RL A
Sbjct: 255 LLKRNAASRLGA 266
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 138 bits (347), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 136/252 (53%), Gaps = 12/252 (4%)
Query: 44 VLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLV-TIDDERSVKLEIEIMTRLSGHP 102
VLG+ G+G+ +R + TG++FA K + K +V D K E I+ + HP
Sbjct: 24 VLGKG-GYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK-HP 81
Query: 103 NVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIG 162
+VDL ++ ++L++E +GGELF +LE+ G F E A ++ + + H+ G
Sbjct: 82 FIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKG 141
Query: 163 VVHRDLKPENILLATKASSSPIKLADFGLATY-IEPGQSLLGTVGSPFYIAPEVLA-GGY 220
+++RDLKPENI+L + +KL DFGL I G G+ Y+APE+L G+
Sbjct: 142 IIYRDLKPENIMLNHQGH---VKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGH 198
Query: 221 NQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMG 280
N+A D WS G ++Y +L+G PPF G + + D + L P +++ A+DL+
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP----YLTQEARDLLKK 254
Query: 281 MLSTDPSQRLTA 292
+L + + RL A
Sbjct: 255 LLKRNAASRLGA 266
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 134/252 (53%), Gaps = 9/252 (3%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+ F + LG G FG + + K TG+++A K + KD ++ DD E I++
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HP + L ++ D + VME GG+L ++K RF EA AR +++ +++ H+
Sbjct: 83 HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHD 142
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATY-IEPGQSLLGTVGSPFYIAPEVLAGG 219
G+++RDLK +N+LL + KLADFG+ I G + G+P YIAPE+L
Sbjct: 143 KGIIYRDLKLDNVLLDHEGHC---KLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEM 199
Query: 220 -YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLV 278
Y A D W+ GV+LY +L G PF + +F+A+ ++ +P+ W H + A ++
Sbjct: 200 LYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT--WLH--EDATGIL 255
Query: 279 MGMLSTDPSQRL 290
++ +P+ RL
Sbjct: 256 KSFMTKNPTMRL 267
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/266 (31%), Positives = 139/266 (52%), Gaps = 19/266 (7%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
QI E F L + LG G FG + + K T + FA K++ KD ++ DD +E +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 95 MTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
++ HP + + ++ ++ + VME GG+L + ++ +F + A +++
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG 131
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTV------GSP 208
+ + H G+V+RDLK +NILL IK+ADFG+ +++LG G+P
Sbjct: 132 LQFLHSKGIVYRDLKLDNILLDKDGH---IKIADFGMCK-----ENMLGDAKTNEFCGTP 183
Query: 209 FYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPW 267
YIAPE+L G YN + D WS GV+LY +L G PF G + +F ++R + +P W
Sbjct: 184 DYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR--W 241
Query: 268 DHISDSAKDLVMGMLSTDPSQRLTAR 293
+ AKDL++ + +P +RL R
Sbjct: 242 --LEKEAKDLLVKLFVREPEKRLGVR 265
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 142/282 (50%), Gaps = 16/282 (5%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E + L Q LG G +G +++ ++ T E A K + R +D ++K EI + ++
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEI-CINKMLN 62
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
H NVV + + +L +E C+GGELF R+E E +A+ F QLM V+Y H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLAT---YIEPGQSLLGTVGSPFYIAPEVLA 217
IG+ HRD+KPEN+LL + + +K++DFGLAT Y + L G+ Y+APE+L
Sbjct: 123 IGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 218 GG--YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
+ + DVWS G++L +L+G P W + + + NPW I +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSW----MGDGIQDPEKLSG 313
L+ +L +PS R+T + W + G + P SG
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSG 280
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 142/282 (50%), Gaps = 16/282 (5%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E + L Q LG G +G +++ ++ T E A K + R +D ++K EI I ++
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEICI-NKMLN 63
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
H NVV + + +L +E C+GGELF R+E E +A+ F QLM V+Y H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLAT---YIEPGQSLLGTVGSPFYIAPEVLA 217
IG+ HRD+KPEN+LL + + +K++DFGLAT Y + L G+ Y+APE+L
Sbjct: 124 IGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 218 GG--YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
+ + DVWS G++L +L+G P W + + + NPW I +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSW----MGDGIQDPEKLSG 313
L+ +L +PS R+T + W + G + P SG
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSG 281
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 142/282 (50%), Gaps = 16/282 (5%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E + L Q LG G +G +++ ++ T E A K + R +D ++K EI I ++
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEICI-NKMLN 63
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
H NVV + + +L +E C+GGELF R+E E +A+ F QLM V+Y H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLAT---YIEPGQSLLGTVGSPFYIAPEVLA 217
IG+ HRD+KPEN+LL + + +K++DFGLAT Y + L G+ Y+APE+L
Sbjct: 124 IGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 218 GG--YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
+ + DVWS G++L +L+G P W + + + NPW I +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSW----MGDGIQDPEKLSG 313
L+ +L +PS R+T + W + G + P SG
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSG 281
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 142/282 (50%), Gaps = 16/282 (5%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E + L Q LG G +G +++ ++ T E A K + R +D ++K EI I ++
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEICI-NKMLN 63
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
H NVV + + +L +E C+GGELF R+E E +A+ F QLM V+Y H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLAT---YIEPGQSLLGTVGSPFYIAPEVLA 217
IG+ HRD+KPEN+LL + + +K++DFGLAT Y + L G+ Y+APE+L
Sbjct: 124 IGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 218 GG--YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
+ + DVWS G++L +L+G P W + + + NPW I +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSW----MGDGIQDPEKLSG 313
L+ +L +PS R+T + W + G + P SG
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSG 281
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/282 (32%), Positives = 142/282 (50%), Gaps = 16/282 (5%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E + L Q LG G +G +++ ++ T E A K + R +D ++K EI I ++
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEICI-NKMLN 63
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
H NVV + + +L +E C+GGELF R+E E +A+ F QLM V+Y H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLAT---YIEPGQSLLGTVGSPFYIAPEVLA 217
IG+ HRD+KPEN+LL + + +K++DFGLAT Y + L G+ Y+APE+L
Sbjct: 124 IGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 218 GG--YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
+ + DVWS G++L +L+G P W + + + NPW I +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSW----MGDGIQDPEKLSG 313
L+ +L +PS R+T + W + G + P SG
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSG 281
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 138/271 (50%), Gaps = 12/271 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E + L Q LG G +G +++ ++ T E A K + R +D ++K EI I ++
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEIXI-NKMLN 62
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
H NVV + + +L +E C+GGELF R+E E +A+ F QLM V+Y H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLAT---YIEPGQSLLGTVGSPFYIAPEVLA 217
IG+ HRD+KPEN+LL + + +K++DFGLAT Y + L G+ Y+APE+L
Sbjct: 123 IGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 218 GG--YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
+ + DVWS G++L +L+G P W + + + NPW I +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSWMGDGIQ 306
L+ +L +PS R+T + W ++
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRWYNKPLK 269
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 138/271 (50%), Gaps = 12/271 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E + L Q LG G +G +++ ++ T E A K + R +D ++K EI I ++
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEIXI-NKMLN 62
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
H NVV + + +L +E C+GGELF R+E E +A+ F QLM V+Y H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLAT---YIEPGQSLLGTVGSPFYIAPEVLA 217
IG+ HRD+KPEN+LL + + +K++DFGLAT Y + L G+ Y+APE+L
Sbjct: 123 IGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 218 GG--YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
+ + DVWS G++L +L+G P W + + + NPW I +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSWMGDGIQ 306
L+ +L +PS R+T + W ++
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRWYNKPLK 269
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 138/271 (50%), Gaps = 12/271 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E + L Q LG G +G +++ ++ T E A K + R +D ++K EI I ++
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEIXI-NKMLN 63
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
H NVV + + +L +E C+GGELF R+E E +A+ F QLM V+Y H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLAT---YIEPGQSLLGTVGSPFYIAPEVLA 217
IG+ HRD+KPEN+LL + + +K++DFGLAT Y + L G+ Y+APE+L
Sbjct: 124 IGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 180
Query: 218 GG--YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
+ + DVWS G++L +L+G P W + + + NPW I +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSWMGDGIQ 306
L+ +L +PS R+T + W ++
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRWYNKPLK 270
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 138/271 (50%), Gaps = 12/271 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E + L Q LG G +G +++ ++ T E A K + R +D ++K EI I ++
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEICI-NKMLN 62
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
H NVV + + +L +E C+GGELF R+E E +A+ F QLM V+Y H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLAT---YIEPGQSLLGTVGSPFYIAPEVLA 217
IG+ HRD+KPEN+LL + + +K++DFGLAT Y + L G+ Y+APE+L
Sbjct: 123 IGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 218 GG--YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
+ + DVWS G++L +L+G P W + + + NPW I +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSWMGDGIQ 306
L+ +L +PS R+T + W ++
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRWYNKPLK 269
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 138/271 (50%), Gaps = 12/271 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E + L Q LG G +G +++ ++ T E A K + R +D ++K EI I ++
Sbjct: 5 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEICI-NKMLN 61
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
H NVV + + +L +E C+GGELF R+E E +A+ F QLM V+Y H
Sbjct: 62 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 121
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLAT---YIEPGQSLLGTVGSPFYIAPEVLA 217
IG+ HRD+KPEN+LL + + +K++DFGLAT Y + L G+ Y+APE+L
Sbjct: 122 IGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 178
Query: 218 GG--YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
+ + DVWS G++L +L+G P W + + + NPW I +
Sbjct: 179 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 237
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSWMGDGIQ 306
L+ +L +PS R+T + W ++
Sbjct: 238 ALLHKILVENPSARITIPDIKKDRWYNKPLK 268
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 138/271 (50%), Gaps = 12/271 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E + L Q LG G +G +++ ++ T E A K + R +D ++K EI I ++
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEICI-NKMLN 62
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
H NVV + + +L +E C+GGELF R+E E +A+ F QLM V+Y H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLAT---YIEPGQSLLGTVGSPFYIAPEVLA 217
IG+ HRD+KPEN+LL + + +K++DFGLAT Y + L G+ Y+APE+L
Sbjct: 123 IGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 218 GG--YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
+ + DVWS G++L +L+G P W + + + NPW I +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSXQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSWMGDGIQ 306
L+ +L +PS R+T + W ++
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRWYNKPLK 269
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 138/271 (50%), Gaps = 12/271 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E + L Q LG G +G +++ ++ T E A K + R +D ++K EI I ++
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEICI-NKMLN 63
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
H NVV + + +L +E C+GGELF R+E E +A+ F QLM V+Y H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLAT---YIEPGQSLLGTVGSPFYIAPEVLA 217
IG+ HRD+KPEN+LL + + +K++DFGLAT Y + L G+ Y+APE+L
Sbjct: 124 IGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 218 GG--YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
+ + DVWS G++L +L+G P W + + + NPW I +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSWMGDGIQ 306
L+ +L +PS R+T + W ++
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRWYNKPLK 270
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 138/271 (50%), Gaps = 12/271 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E + L Q LG G +G +++ ++ T E A K + R +D ++K EI I ++
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEICI-NKMLN 62
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
H NVV + + +L +E C+GGELF R+E E +A+ F QLM V+Y H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLAT---YIEPGQSLLGTVGSPFYIAPEVLA 217
IG+ HRD+KPEN+LL + + +K++DFGLAT Y + L G+ Y+APE+L
Sbjct: 123 IGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 218 GG--YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
+ + DVWS G++L +L+G P W + + + NPW I +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSWMGDGIQ 306
L+ +L +PS R+T + W ++
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRWYNKPLK 269
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 138/271 (50%), Gaps = 12/271 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E + L Q LG G +G +++ ++ T E A K + R +D ++K EI I ++
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEICI-NKMLN 62
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
H NVV + + +L +E C+GGELF R+E E +A+ F QLM V+Y H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLAT---YIEPGQSLLGTVGSPFYIAPEVLA 217
IG+ HRD+KPEN+LL + + +K++DFGLAT Y + L G+ Y+APE+L
Sbjct: 123 IGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 218 GG--YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
+ + DVWS G++L +L+G P W + + + NPW I +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSWMGDGIQ 306
L+ +L +PS R+T + W ++
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRWYNKPLK 269
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 138/271 (50%), Gaps = 12/271 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E + L Q LG G +G +++ ++ T E A K + R +D ++K EI I ++
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEICI-NKMLN 62
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
H NVV + + +L +E C+GGELF R+E E +A+ F QLM V+Y H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLAT---YIEPGQSLLGTVGSPFYIAPEVLA 217
IG+ HRD+KPEN+LL + + +K++DFGLAT Y + L G+ Y+APE+L
Sbjct: 123 IGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 218 GG--YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
+ + DVWS G++L +L+G P W + + + NPW I +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSWMGDGIQ 306
L+ +L +PS R+T + W ++
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRWYNKPLK 269
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 138/271 (50%), Gaps = 12/271 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E + L Q LG G +G +++ ++ T E A K + R +D ++K EI I ++
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEICI-NKMLN 62
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
H NVV + + +L +E C+GGELF R+E E +A+ F QLM V+Y H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLAT---YIEPGQSLLGTVGSPFYIAPEVLA 217
IG+ HRD+KPEN+LL + + +K++DFGLAT Y + L G+ Y+APE+L
Sbjct: 123 IGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 218 GG--YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
+ + DVWS G++L +L+G P W + + + NPW I +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSWMGDGIQ 306
L+ +L +PS R+T + W ++
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRWYNKPLK 269
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 138/271 (50%), Gaps = 12/271 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E + L Q LG G +G +++ ++ T E A K + R +D ++K EI I ++
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEICI-NKMLN 62
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
H NVV + + +L +E C+GGELF R+E E +A+ F QLM V+Y H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLAT---YIEPGQSLLGTVGSPFYIAPEVLA 217
IG+ HRD+KPEN+LL + + +K++DFGLAT Y + L G+ Y+APE+L
Sbjct: 123 IGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLK 179
Query: 218 GG--YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
+ + DVWS G++L +L+G P W + + + NPW I +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSWMGDGIQ 306
L+ +L +PS R+T + W ++
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRWYNKPLK 269
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 136/265 (51%), Gaps = 12/265 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E + L Q LG G +G +++ ++ T E A K + R +D ++K EI I ++
Sbjct: 6 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEICI-NKMLN 62
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
H NVV + + +L +E C+GGELF R+E E +A+ F QLM V+Y H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLAT---YIEPGQSLLGTVGSPFYIAPEVLA 217
IG+ HRD+KPEN+LL + + +K++DFGLAT Y + L G+ Y+APE+L
Sbjct: 123 IGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 218 GG--YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
+ + DVWS G++L +L+G P W + + + NPW I +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSW 300
L+ +L +PS R+T + W
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRW 263
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 136/265 (51%), Gaps = 12/265 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E + L Q LG G +G +++ ++ T E A K + R +D ++K EI I ++
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEICI-NKMLN 63
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
H NVV + + +L +E C+GGELF R+E E +A+ F QLM V+Y H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLAT---YIEPGQSLLGTVGSPFYIAPEVLA 217
IG+ HRD+KPEN+LL + + +K++DFGLAT Y + L G+ Y+APE+L
Sbjct: 124 IGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 218 GG--YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
+ + DVWS G++L +L+G P W + + + NPW I +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSW 300
L+ +L +PS R+T + W
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRW 264
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 138/271 (50%), Gaps = 12/271 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E + L Q LG G +G +++ ++ T E A K + R +D ++K EI I L+
Sbjct: 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEICINAMLN- 63
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
H NVV + + +L +E C+GGELF R+E E +A+ F QLM V+Y H
Sbjct: 64 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLAT---YIEPGQSLLGTVGSPFYIAPEVLA 217
IG+ HRD+KPEN+LL + + +K++DFGLAT Y + L G+ Y+APE+L
Sbjct: 124 IGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 180
Query: 218 GG--YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
+ + DVWS G++L +L+G P W + + + NPW I +
Sbjct: 181 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSWMGDGIQ 306
L+ +L +PS R+T + W ++
Sbjct: 240 ALLHKILVENPSARITIPDIKKDRWYNKPLK 270
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 144/276 (52%), Gaps = 16/276 (5%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
LG G FG + + K T E++A K + KD ++ DD +E ++ P + L
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 408
Query: 109 AVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDL 168
+ ++ D ++ VME GG+L + +++ GRF E A ++ + + G+++RDL
Sbjct: 409 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDL 468
Query: 169 KPENILLATKASSSPIKLADFGLAT-YIEPGQSLLGTVGSPFYIAPEVLA-GGYNQAADV 226
K +N++L ++ IK+ADFG+ I G + G+P YIAPE++A Y ++ D
Sbjct: 469 KLDNVMLDSEGH---IKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDW 525
Query: 227 WSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDP 286
W+ GV+LY +L+G PF G + +F ++ ++ +P + +S A + G+++ P
Sbjct: 526 WAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS----MSKEAVAICKGLMTKHP 581
Query: 287 SQRLTA-----RQVLDHSWMGDGIQDPEKLSGNKIE 317
+RL R + +H++ D EKL +I+
Sbjct: 582 GKRLGCGPEGERDIKEHAFF--RYIDWEKLERKEIQ 615
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/271 (32%), Positives = 137/271 (50%), Gaps = 12/271 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E + L Q LG G G +++ ++ T E A K + R +D ++K EI I ++
Sbjct: 6 EDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKR--AVDCPENIKKEICI-NKMLN 62
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
H NVV + + +L +E C+GGELF R+E E +A+ F QLM V+Y H
Sbjct: 63 HENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLAT---YIEPGQSLLGTVGSPFYIAPEVLA 217
IG+ HRD+KPEN+LL + + +K++DFGLAT Y + L G+ Y+APE+L
Sbjct: 123 IGITHRDIKPENLLLDERDN---LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLK 179
Query: 218 GG--YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
+ + DVWS G++L +L+G P W + + + NPW I +
Sbjct: 180 RREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 238
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSWMGDGIQ 306
L+ +L +PS R+T + W ++
Sbjct: 239 ALLHKILVENPSARITIPDIKKDRWYNKPLK 269
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 144/276 (52%), Gaps = 16/276 (5%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
LG G FG + + K T E++A K + KD ++ DD +E ++ P + L
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 87
Query: 109 AVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDL 168
+ ++ D ++ VME GG+L + +++ GRF E A ++ + + G+++RDL
Sbjct: 88 SCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDL 147
Query: 169 KPENILLATKASSSPIKLADFGLAT-YIEPGQSLLGTVGSPFYIAPEVLA-GGYNQAADV 226
K +N++L ++ IK+ADFG+ I G + G+P YIAPE++A Y ++ D
Sbjct: 148 KLDNVMLDSEGH---IKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDW 204
Query: 227 WSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDP 286
W+ GV+LY +L+G PF G + +F ++ ++ +P + +S A + G+++ P
Sbjct: 205 WAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS----MSKEAVAICKGLMTKHP 260
Query: 287 SQRLTA-----RQVLDHSWMGDGIQDPEKLSGNKIE 317
+RL R + +H++ D EKL +I+
Sbjct: 261 GKRLGCGPEGERDIKEHAFF--RYIDWEKLERKEIQ 294
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 128 bits (321), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 142/290 (48%), Gaps = 37/290 (12%)
Query: 42 RFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLV--------------------T 81
++ L ++G G +GV+++ ++ +A K ++K +L+
Sbjct: 14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGC 73
Query: 82 IDDE---RSVKLEIEIMTRLSGHPNVVDLKAVYED--EDYVHLVMELCAGGELFHRLEKF 136
I V EI I+ +L HPNVV L V +D ED++++V EL G + +
Sbjct: 74 IQPRGPIEQVYQEIAILKKLD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVM-EVPTL 131
Query: 137 GRFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIE 196
SE +AR F L++ + Y H ++HRD+KP N+L+ IK+ADFG++ +
Sbjct: 132 KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGH---IKIADFGVSNEFK 188
Query: 197 PGQSLL-GTVGSPFYIAPEVLAGGYN----QAADVWSAGVILYILLSGMPPFWGNTKSRI 251
+LL TVG+P ++APE L+ +A DVW+ GV LY + G PF +
Sbjct: 189 GSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCL 248
Query: 252 FDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
+++ L FP P I++ KDL+ ML +P R+ ++ H W+
Sbjct: 249 HSKIKSQALEFPDQP--DIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 132/259 (50%), Gaps = 12/259 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F G+ LG G F + + + T +A K + K ++ + V E ++M+RL
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 91
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HP V L ++D++ ++ + GEL + K G F E R +++ + Y H
Sbjct: 92 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 151
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEP--GQSLLGT-VGSPFYIAPEVLA 217
G++HRDLKPENILL I++ DFG A + P Q+ + VG+ Y++PE+L
Sbjct: 152 KGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 208
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKD 276
+++D+W+ G I+Y L++G+PPF + IF + + FP + A+D
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARD 264
Query: 277 LVMGMLSTDPSQRLTARQV 295
LV +L D ++RL ++
Sbjct: 265 LVEKLLVLDATKRLGCEEM 283
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 129/259 (49%), Gaps = 12/259 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F G+ LG G F + + + T +A K + K ++ + V E ++M+RL
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 88
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HP V L ++D++ ++ + GEL + K G F E R +++ + Y H
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLL---GTVGSPFYIAPEVLA 217
G++HRDLKPENILL I++ DFG A + P VG+ Y++PE+L
Sbjct: 149 KGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLT 205
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKD 276
+++D+W+ G I+Y L++G+PPF + IF + + FP + A+D
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARD 261
Query: 277 LVMGMLSTDPSQRLTARQV 295
LV +L D ++RL ++
Sbjct: 262 LVEKLLVLDATKRLGCEEM 280
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 129/259 (49%), Gaps = 12/259 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F G+ LG G F + + + T +A K + K ++ + V E ++M+RL
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 90
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HP V L ++D++ ++ + GEL + K G F E R +++ + Y H
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT---VGSPFYIAPEVLA 217
G++HRDLKPENILL I++ DFG A + P VG+ Y++PE+L
Sbjct: 151 KGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKD 276
+++D+W+ G I+Y L++G+PPF + IF + + FP + A+D
Sbjct: 208 EKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFP----EKFFPKARD 263
Query: 277 LVMGMLSTDPSQRLTARQV 295
LV +L D ++RL ++
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 139/259 (53%), Gaps = 20/259 (7%)
Query: 42 RFVLGQQLGWGQFG---VIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRL 98
+F L + LG G FG +++ S +++A K + K L D R+ K+E +I+ +
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEV 83
Query: 99 SGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYC 158
+ HP +V L ++ E ++L+++ GG+LF RL K F+E + + +L + +
Sbjct: 84 N-HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 142
Query: 159 HEIGVVHRDLKPENILLATKASSSPIKLADFGLAT----YIEPGQSLLGTVGSPFYIAPE 214
H +G+++RDLKPENILL + IKL DFGL+ + + S GTV Y+APE
Sbjct: 143 HSLGIIYRDLKPENILLDEEGH---IKLTDFGLSKESIDHEKKAYSFCGTVE---YMAPE 196
Query: 215 VL-AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDS 273
V+ G+ Q+AD WS GV+++ +L+G PF G + + A L P +S
Sbjct: 197 VVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPE 252
Query: 274 AKDLVMGMLSTDPSQRLTA 292
A+ L+ + +P+ RL A
Sbjct: 253 AQSLLRMLFKRNPANRLGA 271
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 138/257 (53%), Gaps = 20/257 (7%)
Query: 42 RFVLGQQLGWGQFG---VIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRL 98
F L + LG G FG ++R + +G ++A K + K L D R+ K+E +I+ +
Sbjct: 29 HFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRT-KMERDILADV 87
Query: 99 SGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYC 158
+ HP VV L ++ E ++L+++ GG+LF RL K F+E + + +L + +
Sbjct: 88 N-HPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHL 146
Query: 159 HEIGVVHRDLKPENILLATKASSSPIKLADFGLAT----YIEPGQSLLGTVGSPFYIAPE 214
H +G+++RDLKPENILL + IKL DFGL+ + + S GTV Y+APE
Sbjct: 147 HSLGIIYRDLKPENILLDEEGH---IKLTDFGLSKEAIDHEKKAYSFCGTVE---YMAPE 200
Query: 215 VL-AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDS 273
V+ G++ +AD WS GV+++ +L+G PF G + + A L P +S
Sbjct: 201 VVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQ----FLSTE 256
Query: 274 AKDLVMGMLSTDPSQRL 290
A+ L+ + +P+ RL
Sbjct: 257 AQSLLRALFKRNPANRL 273
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 127/254 (50%), Gaps = 12/254 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F G+ LG G F + + + T +A K + K ++ + V E ++M+RL
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 68
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HP V L ++D++ ++ + GEL + K G F E R +++ + Y H
Sbjct: 69 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 128
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT---VGSPFYIAPEVLA 217
G++HRDLKPENILL I++ DFG A + P VG+ Y++PE+L
Sbjct: 129 KGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 185
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKD 276
+++D+W+ G I+Y L++G+PPF + IF + + FP + A+D
Sbjct: 186 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARD 241
Query: 277 LVMGMLSTDPSQRL 290
LV +L D ++RL
Sbjct: 242 LVEKLLVLDATKRL 255
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 129/259 (49%), Gaps = 12/259 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F G+ LG G F + + + T +A K + K ++ + V E ++M+RL
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 91
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HP V L ++D++ ++ + GEL + K G F E R +++ + Y H
Sbjct: 92 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 151
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT---VGSPFYIAPEVLA 217
G++HRDLKPENILL I++ DFG A + P VG+ Y++PE+L
Sbjct: 152 KGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 208
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKD 276
+++D+W+ G I+Y L++G+PPF + IF + + FP + A+D
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARD 264
Query: 277 LVMGMLSTDPSQRLTARQV 295
LV +L D ++RL ++
Sbjct: 265 LVEKLLVLDATKRLGCEEM 283
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 129/259 (49%), Gaps = 12/259 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F G+ LG G F + + + T +A K + K ++ + V E ++M+RL
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 90
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HP V L ++D++ ++ + GEL + K G F E R +++ + Y H
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT---VGSPFYIAPEVLA 217
G++HRDLKPENILL I++ DFG A + P VG+ Y++PE+L
Sbjct: 151 KGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKD 276
+++D+W+ G I+Y L++G+PPF + IF + + FP + A+D
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARD 263
Query: 277 LVMGMLSTDPSQRLTARQV 295
LV +L D ++RL ++
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 129/259 (49%), Gaps = 12/259 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F G+ LG G F + + + T +A K + K ++ + V E ++M+RL
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 67
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HP V L ++D++ ++ + GEL + K G F E R +++ + Y H
Sbjct: 68 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 127
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT---VGSPFYIAPEVLA 217
G++HRDLKPENILL I++ DFG A + P VG+ Y++PE+L
Sbjct: 128 KGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 184
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKD 276
+++D+W+ G I+Y L++G+PPF + IF + + FP + A+D
Sbjct: 185 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARD 240
Query: 277 LVMGMLSTDPSQRLTARQV 295
LV +L D ++RL ++
Sbjct: 241 LVEKLLVLDATKRLGCEEM 259
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 129/259 (49%), Gaps = 12/259 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F G+ LG G F + + + T +A K + K ++ + V E ++M+RL
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 90
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HP V L ++D++ ++ + GEL + K G F E R +++ + Y H
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT---VGSPFYIAPEVLA 217
G++HRDLKPENILL I++ DFG A + P VG+ Y++PE+L
Sbjct: 151 KGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKD 276
+++D+W+ G I+Y L++G+PPF + IF + + FP + A+D
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARD 263
Query: 277 LVMGMLSTDPSQRLTARQV 295
LV +L D ++RL ++
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 129/259 (49%), Gaps = 12/259 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F G+ LG G F + + + T +A K + K ++ + V E ++M+RL
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 88
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HP V L ++D++ ++ + GEL + K G F E R +++ + Y H
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT---VGSPFYIAPEVLA 217
G++HRDLKPENILL I++ DFG A + P VG+ Y++PE+L
Sbjct: 149 KGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKD 276
+++D+W+ G I+Y L++G+PPF + IF + + FP + A+D
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARD 261
Query: 277 LVMGMLSTDPSQRLTARQV 295
LV +L D ++RL ++
Sbjct: 262 LVEKLLVLDATKRLGCEEM 280
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 129/259 (49%), Gaps = 12/259 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F G+ LG G F + + + T +A K + K ++ + V E ++M+RL
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 88
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HP V L ++D++ ++ + GEL + K G F E R +++ + Y H
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT---VGSPFYIAPEVLA 217
G++HRDLKPENILL I++ DFG A + P VG+ Y++PE+L
Sbjct: 149 KGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKD 276
+++D+W+ G I+Y L++G+PPF + IF + + FP + A+D
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARD 261
Query: 277 LVMGMLSTDPSQRLTARQV 295
LV +L D ++RL ++
Sbjct: 262 LVEKLLVLDATKRLGCEEM 280
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 127/254 (50%), Gaps = 12/254 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F G+ LG G F + + + T +A K + K ++ + V E ++M+RL
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 66
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HP V L ++D++ ++ + GEL + K G F E R +++ + Y H
Sbjct: 67 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 126
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT---VGSPFYIAPEVLA 217
G++HRDLKPENILL I++ DFG A + P VG+ Y++PE+L
Sbjct: 127 KGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 183
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKD 276
+++D+W+ G I+Y L++G+PPF + IF + + FP + A+D
Sbjct: 184 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARD 239
Query: 277 LVMGMLSTDPSQRL 290
LV +L D ++RL
Sbjct: 240 LVEKLLVLDATKRL 253
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 129/259 (49%), Gaps = 12/259 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F G+ LG G F + + + T +A K + K ++ + V E ++M+RL
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 95
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HP V L ++D++ ++ + GEL + K G F E R +++ + Y H
Sbjct: 96 HPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 155
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT---VGSPFYIAPEVLA 217
G++HRDLKPENILL I++ DFG A + P VG+ Y++PE+L
Sbjct: 156 KGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 212
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKD 276
+++D+W+ G I+Y L++G+PPF + IF + + FP + A+D
Sbjct: 213 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARD 268
Query: 277 LVMGMLSTDPSQRLTARQV 295
LV +L D ++RL ++
Sbjct: 269 LVEKLLVLDATKRLGCEEM 287
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 129/259 (49%), Gaps = 12/259 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F G+ LG G F + + + T +A K + K ++ + V E ++M+RL
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 90
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HP V L ++D++ ++ + GEL + K G F E R +++ + Y H
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT---VGSPFYIAPEVLA 217
G++HRDLKPENILL I++ DFG A + P VG+ Y++PE+L
Sbjct: 151 KGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKD 276
+++D+W+ G I+Y L++G+PPF + IF + + FP + A+D
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARD 263
Query: 277 LVMGMLSTDPSQRLTARQV 295
LV +L D ++RL ++
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 129/259 (49%), Gaps = 12/259 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F G+ LG G F + + + T +A K + K ++ + V E ++M+RL
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 65
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HP V L ++D++ ++ + GEL + K G F E R +++ + Y H
Sbjct: 66 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 125
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT---VGSPFYIAPEVLA 217
G++HRDLKPENILL I++ DFG A + P VG+ Y++PE+L
Sbjct: 126 KGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 182
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKD 276
+++D+W+ G I+Y L++G+PPF + IF + + FP + A+D
Sbjct: 183 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARD 238
Query: 277 LVMGMLSTDPSQRLTARQV 295
LV +L D ++RL ++
Sbjct: 239 LVEKLLVLDATKRLGCEEM 257
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 139/259 (53%), Gaps = 20/259 (7%)
Query: 42 RFVLGQQLGWGQFG---VIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRL 98
+F L + LG G FG +++ S +++A K + K L D R+ K+E +I+ +
Sbjct: 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEV 83
Query: 99 SGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYC 158
+ HP +V L ++ E ++L+++ GG+LF RL K F+E + + +L + +
Sbjct: 84 N-HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 142
Query: 159 HEIGVVHRDLKPENILLATKASSSPIKLADFGLAT----YIEPGQSLLGTVGSPFYIAPE 214
H +G+++RDLKPENILL + IKL DFGL+ + + S GTV Y+APE
Sbjct: 143 HSLGIIYRDLKPENILLDEEGH---IKLTDFGLSKESIDHEKKAYSFCGTVE---YMAPE 196
Query: 215 VL-AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDS 273
V+ G+ Q+AD WS GV+++ +L+G PF G + + A L P +S
Sbjct: 197 VVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPE 252
Query: 274 AKDLVMGMLSTDPSQRLTA 292
A+ L+ + +P+ RL A
Sbjct: 253 AQSLLRMLFKRNPANRLGA 271
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 132/259 (50%), Gaps = 12/259 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F G+ LG G F + + + T +A K + K ++ + V E ++M+RL
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 87
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HP V L ++D++ ++ + GEL + K G F E R +++ + Y H
Sbjct: 88 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 147
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEP--GQSLLGT-VGSPFYIAPEVLA 217
G++HRDLKPENILL I++ DFG A + P Q+ + VG+ Y++PE+L
Sbjct: 148 KGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 204
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKD 276
+++D+W+ G I+Y L++G+PPF + IF + + FP + A+D
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARD 260
Query: 277 LVMGMLSTDPSQRLTARQV 295
LV +L D ++RL ++
Sbjct: 261 LVEKLLVLDATKRLGCEEM 279
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 129/259 (49%), Gaps = 12/259 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F G+ LG G F + + + T +A K + K ++ + V E ++M+RL
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 90
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HP V L ++D++ ++ + GEL + K G F E R +++ + Y H
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT---VGSPFYIAPEVLA 217
G++HRDLKPENILL I++ DFG A + P VG+ Y++PE+L
Sbjct: 151 KGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKD 276
+++D+W+ G I+Y L++G+PPF + IF + + FP + A+D
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFP----EKFFPKARD 263
Query: 277 LVMGMLSTDPSQRLTARQV 295
LV +L D ++RL ++
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 129/259 (49%), Gaps = 12/259 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F G+ LG G F + + + T +A K + K ++ + V E ++M+RL
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 72
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HP V L ++D++ ++ + GEL + K G F E R +++ + Y H
Sbjct: 73 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 132
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT---VGSPFYIAPEVLA 217
G++HRDLKPENILL I++ DFG A + P VG+ Y++PE+L
Sbjct: 133 KGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 189
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKD 276
+++D+W+ G I+Y L++G+PPF + IF + + FP + A+D
Sbjct: 190 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARD 245
Query: 277 LVMGMLSTDPSQRLTARQV 295
LV +L D ++RL ++
Sbjct: 246 LVEKLLVLDATKRLGCEEM 264
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 129/259 (49%), Gaps = 12/259 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F G+ LG G F + + + T +A K + K ++ + V E ++M+RL
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 93
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HP V L ++D++ ++ + GEL + K G F E R +++ + Y H
Sbjct: 94 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 153
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT---VGSPFYIAPEVLA 217
G++HRDLKPENILL I++ DFG A + P VG+ Y++PE+L
Sbjct: 154 KGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 210
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKD 276
+++D+W+ G I+Y L++G+PPF + IF + + FP+ A+D
Sbjct: 211 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAA----FFPKARD 266
Query: 277 LVMGMLSTDPSQRLTARQV 295
LV +L D ++RL ++
Sbjct: 267 LVEKLLVLDATKRLGCEEM 285
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 139/259 (53%), Gaps = 20/259 (7%)
Query: 42 RFVLGQQLGWGQFG---VIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRL 98
+F L + LG G FG +++ S +++A K + K L D R+ K+E +I+ +
Sbjct: 26 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRT-KMERDILVEV 84
Query: 99 SGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYC 158
+ HP +V L ++ E ++L+++ GG+LF RL K F+E + + +L + +
Sbjct: 85 N-HPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 143
Query: 159 HEIGVVHRDLKPENILLATKASSSPIKLADFGLAT----YIEPGQSLLGTVGSPFYIAPE 214
H +G+++RDLKPENILL + IKL DFGL+ + + S GTV Y+APE
Sbjct: 144 HSLGIIYRDLKPENILLDEEGH---IKLTDFGLSKESIDHEKKAYSFCGTVE---YMAPE 197
Query: 215 VL-AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDS 273
V+ G+ Q+AD WS GV+++ +L+G PF G + + A L P +S
Sbjct: 198 VVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQ----FLSPE 253
Query: 274 AKDLVMGMLSTDPSQRLTA 292
A+ L+ + +P+ RL A
Sbjct: 254 AQSLLRMLFKRNPANRLGA 272
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 129/259 (49%), Gaps = 12/259 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F G+ LG G F + + + T +A K + K ++ + V E ++M+RL
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 87
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HP V L ++D++ ++ + GEL + K G F E R +++ + Y H
Sbjct: 88 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 147
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT---VGSPFYIAPEVLA 217
G++HRDLKPENILL I++ DFG A + P VG+ Y++PE+L
Sbjct: 148 KGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 204
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKD 276
+++D+W+ G I+Y L++G+PPF + IF + + FP + A+D
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARD 260
Query: 277 LVMGMLSTDPSQRLTARQV 295
LV +L D ++RL ++
Sbjct: 261 LVEKLLVLDATKRLGCEEM 279
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 124 bits (312), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 128/259 (49%), Gaps = 12/259 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F G+ LG G F + + T +A K + K ++ + V E ++M+RL
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 88
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HP V L ++D++ ++ + GEL + K G F E R +++ + Y H
Sbjct: 89 HPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT---VGSPFYIAPEVLA 217
G++HRDLKPENILL I++ DFG A + P VG+ Y++PE+L
Sbjct: 149 KGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKD 276
+++D+W+ G I+Y L++G+PPF + IF + + FP + A+D
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARD 261
Query: 277 LVMGMLSTDPSQRLTARQV 295
LV +L D ++RL ++
Sbjct: 262 LVEKLLVLDATKRLGCEEM 280
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 132/259 (50%), Gaps = 12/259 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F G+ LG G F + + + T +A K + K ++ + V E ++M+RL
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD- 90
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
HP V L ++D++ ++ + G L + K G F E R +++ + Y H
Sbjct: 91 HPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEP--GQSLLGT-VGSPFYIAPEVLA 217
G++HRDLKPENILL I++ DFG A + P Q+ + VG+ Y++PE+L
Sbjct: 151 KGIIHRDLKPENILLNEDMH---IQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 207
Query: 218 -GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKD 276
++++D+W+ G I+Y L++G+PPF + IF + + FP + A+D
Sbjct: 208 EKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EKFFPKARD 263
Query: 277 LVMGMLSTDPSQRLTARQV 295
LV +L D ++RL ++
Sbjct: 264 LVEKLLVLDATKRLGCEEM 282
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 142/266 (53%), Gaps = 26/266 (9%)
Query: 41 ERFVLGQQLGWGQFG---VIRVCSDKFTGEVFACKSIAKDRLV-TIDDERSVKLEIEIMT 96
E F L + LG G +G ++R S TG+++A K + K +V + E +++
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 97 RLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVL 156
+ P +V L ++ E +HL+++ GGELF L + RF+E E ++ +++ +
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALE 173
Query: 157 YCHEIGVVHRDLKPENILLATKASSSPIKLADFGL-----ATYIEPGQSLLGTVGSPFYI 211
+ H++G+++RD+K ENILL S+ + L DFGL A E GT+ Y+
Sbjct: 174 HLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFVADETERAYDFCGTIE---YM 227
Query: 212 APEVLAG---GYNQAADVWSAGVILYILLSGMPPFW----GNTKSRIFDAVRTADLRFPS 264
AP+++ G G+++A D WS GV++Y LL+G PF N+++ I + ++ +P
Sbjct: 228 APDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQ 287
Query: 265 NPWDHISDSAKDLVMGMLSTDPSQRL 290
+S AKDL+ +L DP +RL
Sbjct: 288 E----MSALAKDLIQRLLMKDPKKRL 309
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 152/313 (48%), Gaps = 54/313 (17%)
Query: 39 LRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKL---EIEIM 95
+ E++ ++G G +GV+ C ++ TG++ A K L + DD K+ EI ++
Sbjct: 1 MMEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKF----LESEDDPVIKKIALREIRML 56
Query: 96 TRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGR-FSEAEARVLFMQLMQV 154
+L HPN+V+L V+ + +HLV E C + H L+++ R E + + Q +Q
Sbjct: 57 KQLK-HPNLVNLLEVFRRKRRLHLVFEYC-DHTVLHELDRYQRGVPEHLVKSITWQTLQA 114
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIE-PGQSLLGTVGSPFYIAP 213
V +CH+ +HRD+KPENIL+ S IKL DFG A + P V + +Y +P
Sbjct: 115 VNFCHKHNCIHRDVKPENILI---TKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSP 171
Query: 214 EVLAGG--YNQAADVWSAGVILYILLSGMPPFWGN------------------------T 247
E+L G Y DVW+ G + LLSG+P + G +
Sbjct: 172 ELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFS 231
Query: 248 KSRIFDAVRTAD--------LRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHS 299
++ F V+ D L+FP+ IS A L+ G L DP++RLT Q+L H
Sbjct: 232 TNQYFSGVKIPDPEDMEPLELKFPN-----ISYPALGLLKGCLHMDPTERLTCEQLLHHP 286
Query: 300 WMGDGIQDPEKLS 312
+ + I++ E L+
Sbjct: 287 YF-ENIREIEDLA 298
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 164/341 (48%), Gaps = 28/341 (8%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
LG G FG + C + TG+++ACK + K R+ E E +I+ +++ VV L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR-FVVSLA 250
Query: 109 AVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVLYCHEIGVVHR 166
YE +D + LV+ L GG+L + G+ EAR +F ++ + H +V+R
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYR 310
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAG-GYNQAAD 225
DLKPENILL I+++D GLA ++ GQ++ G VG+ Y+APEV+ Y + D
Sbjct: 311 DLKPENILLDDHGH---IRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPD 367
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ G +LY +++G PF K + V P + S A+ L +L D
Sbjct: 368 WWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKD 427
Query: 286 PSQRL-----TARQVLDH--------SWMGDGIQDPEKLSGNKIEDCKEWDLGSGSFST- 331
P++RL +AR+V +H +G G+ +P + CK+ L FST
Sbjct: 428 PAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDV-LDIEQFSTV 486
Query: 332 ---QIIPRNQDI--SFGTGS-PVFSDDESPAFTCRTSFSSF 366
++ P +QD F TGS P+ +E C + F
Sbjct: 487 KGVELEPTDQDFYQKFATGSVPIPWQNEMVETECFQELNVF 527
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 164/341 (48%), Gaps = 28/341 (8%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
LG G FG + C + TG+++ACK + K R+ E E +I+ +++ VV L
Sbjct: 192 LGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSR-FVVSLA 250
Query: 109 AVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVLYCHEIGVVHR 166
YE +D + LV+ L GG+L + G+ EAR +F ++ + H +V+R
Sbjct: 251 YAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYR 310
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAG-GYNQAAD 225
DLKPENILL I+++D GLA ++ GQ++ G VG+ Y+APEV+ Y + D
Sbjct: 311 DLKPENILLDDHGH---IRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPD 367
Query: 226 VWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTD 285
W+ G +LY +++G PF K + V P + S A+ L +L D
Sbjct: 368 WWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKD 427
Query: 286 PSQRL-----TARQVLDH--------SWMGDGIQDPEKLSGNKIEDCKEWDLGSGSFST- 331
P++RL +AR+V +H +G G+ +P + CK+ L FST
Sbjct: 428 PAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDV-LDIEQFSTV 486
Query: 332 ---QIIPRNQDI--SFGTGS-PVFSDDESPAFTCRTSFSSF 366
++ P +QD F TGS P+ +E C + F
Sbjct: 487 KGVELEPTDQDFYQKFATGSVPIPWQNEMVETECFQELNVF 527
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 146/277 (52%), Gaps = 36/277 (12%)
Query: 34 NQISNLR---ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKL 90
N+I +LR E + + + +G G FG +++ K T +V+A K ++K ++ D
Sbjct: 59 NKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWE 118
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRL------EKFGRFSEAEA 144
E +IM + P VV L ++D+ Y+++VME GG+L + + EK+ RF AE
Sbjct: 119 ERDIMA-FANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEV 177
Query: 145 RVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYI-EPGQSLLG 203
VL + + H +G +HRD+KP+N+LL S +KLADFG + + G
Sbjct: 178 -VLALDAI------HSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCD 227
Query: 204 T-VGSPFYIAPEVLA-----GGYNQAADVWSAGVILYILLSGMPPFWGN----TKSRIFD 253
T VG+P YI+PEVL G Y + D WS GV LY +L G PF+ + T S+I +
Sbjct: 228 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMN 287
Query: 254 AVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRL 290
+ L FP + + IS AK+L+ L TD RL
Sbjct: 288 HKNS--LTFPDD--NDISKEAKNLICAFL-TDREVRL 319
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 145/281 (51%), Gaps = 30/281 (10%)
Query: 37 SNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTI----DDERSVKLEI 92
+ L ++++G LG G +G ++ D E +++ + + + E +VK EI
Sbjct: 1 AKLIGKYLMGDLLGEGSYGKVKEVLDS---ETLCRRAVKILKKKKLRRIPNGEANVKKEI 57
Query: 93 EIMTRLSGHPNVVDLKAVY--EDEDYVHLVMELCAGG--ELFHRLEKFGRFSEAEARVLF 148
+++ RL H NV+ L V E++ +++VME C G E+ + + RF +A F
Sbjct: 58 QLLRRLR-HKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPE-KRFPVCQAHGYF 115
Query: 149 MQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEP---GQSLLGTV 205
QL+ + Y H G+VH+D+KP N+LL T + +K++ G+A + P + +
Sbjct: 116 CQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGT---LKISALGVAEALHPFAADDTCRTSQ 172
Query: 206 GSPFYIAPEVLAG-----GYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADL 260
GSP + PE+ G G+ D+WSAGV LY + +G+ PF G+ ++F+ +
Sbjct: 173 GSPAFQPPEIANGLDTFSGFK--VDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSY 230
Query: 261 RFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
P + +S DL+ GML +P++R + RQ+ HSW
Sbjct: 231 AIPGDCGPPLS----DLLKGMLEYEPAKRFSIRQIRQHSWF 267
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 146/277 (52%), Gaps = 36/277 (12%)
Query: 34 NQISNLR---ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKL 90
N+I +LR E + + + +G G FG +++ K T +V+A K ++K ++ D
Sbjct: 64 NKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWE 123
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRL------EKFGRFSEAEA 144
E +IM + P VV L ++D+ Y+++VME GG+L + + EK+ RF AE
Sbjct: 124 ERDIMA-FANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEV 182
Query: 145 RVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYI-EPGQSLLG 203
VL + + H +G +HRD+KP+N+LL S +KLADFG + + G
Sbjct: 183 -VLALDAI------HSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCD 232
Query: 204 T-VGSPFYIAPEVLA-----GGYNQAADVWSAGVILYILLSGMPPFWGN----TKSRIFD 253
T VG+P YI+PEVL G Y + D WS GV LY +L G PF+ + T S+I +
Sbjct: 233 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMN 292
Query: 254 AVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRL 290
+ L FP + + IS AK+L+ L TD RL
Sbjct: 293 HKNS--LTFPDD--NDISKEAKNLICAFL-TDREVRL 324
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 146/277 (52%), Gaps = 36/277 (12%)
Query: 34 NQISNLR---ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKL 90
N+I +LR E + + + +G G FG +++ K T +V+A K ++K ++ D
Sbjct: 64 NKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWE 123
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRL------EKFGRFSEAEA 144
E +IM + P VV L ++D+ Y+++VME GG+L + + EK+ RF AE
Sbjct: 124 ERDIMA-FANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEV 182
Query: 145 RVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYI-EPGQSLLG 203
VL + + H +G +HRD+KP+N+LL S +KLADFG + + G
Sbjct: 183 -VLALDAI------HSMGFIHRDVKPDNMLL---DKSGHLKLADFGTCMKMNKEGMVRCD 232
Query: 204 T-VGSPFYIAPEVLA-----GGYNQAADVWSAGVILYILLSGMPPFWGN----TKSRIFD 253
T VG+P YI+PEVL G Y + D WS GV LY +L G PF+ + T S+I +
Sbjct: 233 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMN 292
Query: 254 AVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRL 290
+ L FP + + IS AK+L+ L TD RL
Sbjct: 293 HKNS--LTFPDD--NDISKEAKNLICAFL-TDREVRL 324
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 132/259 (50%), Gaps = 18/259 (6%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHP 102
F L + +G G + + + K T ++A K + K+ + +D V+ E + + S HP
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 81
Query: 103 NVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIG 162
+V L + ++ E + V+E GG+L +++ + E AR ++ + Y HE G
Sbjct: 82 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 141
Query: 163 VVHRDLKPENILLATKASSSPIKLADFGLATY-IEPGQSLLGTVGSPFYIAPEVLAG-GY 220
+++RDLK +N+LL ++ IKL D+G+ + PG + G+P YIAPE+L G Y
Sbjct: 142 IIYRDLKLDNVLLDSEGH---IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDY 198
Query: 221 NQAADVWSAGVILYILLSGMPPF---------WGNTKSRIFDAVRTADLRFPSNPWDHIS 271
+ D W+ GV+++ +++G PF NT+ +F + +R P + +S
Sbjct: 199 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS----MS 254
Query: 272 DSAKDLVMGMLSTDPSQRL 290
A ++ L+ DP +RL
Sbjct: 255 VKAASVLKSFLNKDPKERL 273
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 132/259 (50%), Gaps = 18/259 (6%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHP 102
F L + +G G + + + K T ++A K + K+ + +D V+ E + + S HP
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 66
Query: 103 NVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIG 162
+V L + ++ E + V+E GG+L +++ + E AR ++ + Y HE G
Sbjct: 67 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 126
Query: 163 VVHRDLKPENILLATKASSSPIKLADFGLATY-IEPGQSLLGTVGSPFYIAPEVLAG-GY 220
+++RDLK +N+LL ++ IKL D+G+ + PG + G+P YIAPE+L G Y
Sbjct: 127 IIYRDLKLDNVLLDSEGH---IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDY 183
Query: 221 NQAADVWSAGVILYILLSGMPPF---------WGNTKSRIFDAVRTADLRFPSNPWDHIS 271
+ D W+ GV+++ +++G PF NT+ +F + +R P + +S
Sbjct: 184 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS----LS 239
Query: 272 DSAKDLVMGMLSTDPSQRL 290
A ++ L+ DP +RL
Sbjct: 240 VKAASVLKSFLNKDPKERL 258
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 132/259 (50%), Gaps = 18/259 (6%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHP 102
F L + +G G + + + K T ++A K + K+ + +D V+ E + + S HP
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHP 70
Query: 103 NVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIG 162
+V L + ++ E + V+E GG+L +++ + E AR ++ + Y HE G
Sbjct: 71 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 130
Query: 163 VVHRDLKPENILLATKASSSPIKLADFGLATY-IEPGQSLLGTVGSPFYIAPEVLAG-GY 220
+++RDLK +N+LL ++ IKL D+G+ + PG + G+P YIAPE+L G Y
Sbjct: 131 IIYRDLKLDNVLLDSEGH---IKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDY 187
Query: 221 NQAADVWSAGVILYILLSGMPPF---------WGNTKSRIFDAVRTADLRFPSNPWDHIS 271
+ D W+ GV+++ +++G PF NT+ +F + +R P + +S
Sbjct: 188 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS----LS 243
Query: 272 DSAKDLVMGMLSTDPSQRL 290
A ++ L+ DP +RL
Sbjct: 244 VKAASVLKSFLNKDPKERL 262
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 132/259 (50%), Gaps = 18/259 (6%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHP 102
F L + +G G + + + K T ++A + + K+ + +D V+ E + + S HP
Sbjct: 54 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHP 113
Query: 103 NVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIG 162
+V L + ++ E + V+E GG+L +++ + E AR ++ + Y HE G
Sbjct: 114 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERG 173
Query: 163 VVHRDLKPENILLATKASSSPIKLADFGLATY-IEPGQSLLGTVGSPFYIAPEVLAG-GY 220
+++RDLK +N+LL ++ IKL D+G+ + PG + G+P YIAPE+L G Y
Sbjct: 174 IIYRDLKLDNVLLDSEGH---IKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDY 230
Query: 221 NQAADVWSAGVILYILLSGMPPF---------WGNTKSRIFDAVRTADLRFPSNPWDHIS 271
+ D W+ GV+++ +++G PF NT+ +F + +R P + +S
Sbjct: 231 GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRS----LS 286
Query: 272 DSAKDLVMGMLSTDPSQRL 290
A ++ L+ DP +RL
Sbjct: 287 VKAASVLKSFLNKDPKERL 305
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 139/282 (49%), Gaps = 17/282 (6%)
Query: 30 ILDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVK 89
+ D N+ N + F + + +G G FG + + T +++A K + K + V ++ R+V
Sbjct: 5 VFDENEDVNF-DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVF 63
Query: 90 LEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM 149
E++IM L HP +V+L ++DE+ + +V++L GG+L + L++ F E ++
Sbjct: 64 KELQIMQGLE-HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFIC 122
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF 209
+L+ + Y ++HRD+KP+NILL + + DF +A + + G+
Sbjct: 123 ELVMALDYLQNQRIIHRDMKPDNILLDEHGH---VHITDFNIAAMLPRETQITTMAGTKP 179
Query: 210 YIAPEVLA----GGYNQAADVWSAGVILYILLSGMPPFW---GNTKSRIFDAVRTADLRF 262
Y+APE+ + GY+ A D WS GV Y LL G P+ + I T + +
Sbjct: 180 YMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTY 239
Query: 263 PSNPWDHISDSAKDLVMGMLSTDPSQRLTA-RQVLDHSWMGD 303
PS W S L+ +L +P QR + V + +M D
Sbjct: 240 PS-AW---SQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMND 277
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 137/271 (50%), Gaps = 14/271 (5%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E++V Q++G G FG + G + K I R+ + + E S + E+ ++ +
Sbjct: 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREES-RREVAVLANMK- 81
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRL--EKFGRFSEAEARVLFMQLMQVVLYC 158
HPN+V + +E+ +++VM+ C GG+LF R+ +K F E + F+Q+ + +
Sbjct: 82 HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV 141
Query: 159 HEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLL-GTVGSPFYIAPEVLA 217
H+ ++HRD+K +NI L + ++L DFG+A + L +G+P+Y++PE+
Sbjct: 142 HDRKILHRDIKSQNIFLTKDGT---VQLGDFGIARVLNSTVELARACIGTPYYLSPEICE 198
Query: 218 GG-YNQAADVWSAGVILYILLSGMPPF-WGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
YN +D+W+ G +LY L + F G+ K+ + + + FP H S +
Sbjct: 199 NKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGS---FPPVSL-HYSYDLR 254
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSWMGDGIQ 306
LV + +P R + +L+ ++ I+
Sbjct: 255 SLVSQLFKRNPRDRPSVNSILEKGFIAKRIE 285
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 145/297 (48%), Gaps = 44/297 (14%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A K I D +++ EI ++ L+
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN- 61
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA------RVLFMQLMQV 154
HPN+V L V E+ ++LV E L L+KF S + QL+Q
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYIAP 213
+ +CH V+HRDLKPEN+L+ T+ + IKLADFGLA + P ++ V + +Y AP
Sbjct: 117 LAFCHSHRVLHRDLKPENLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAP 173
Query: 214 EVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF----- 262
E+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 233
Query: 263 ------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 234 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 145/297 (48%), Gaps = 44/297 (14%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A K I D +++ EI ++ L+
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN- 62
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA------RVLFMQLMQV 154
HPN+V L V E+ ++LV E L L+KF S + QL+Q
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYIAP 213
+ +CH V+HRDLKPEN+L+ T+ + IKLADFGLA + P ++ V + +Y AP
Sbjct: 118 LAFCHSHRVLHRDLKPENLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAP 174
Query: 214 EVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF----- 262
E+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 234
Query: 263 ------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 235 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 146/300 (48%), Gaps = 50/300 (16%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A K I D +++ EI ++ L+
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN- 63
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA---------RVLFMQL 151
HPN+V L V E+ ++LV E H + +F +A A + QL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFE--------HVDQDLKKFMDASALTGIPLPLIKSYLFQL 115
Query: 152 MQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFY 210
+Q + +CH V+HRDLKP+N+L+ T+ + IKLADFGLA + P ++ V + +Y
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 211 IAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF-- 262
APE+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 232
Query: 263 ---------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 233 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 145/300 (48%), Gaps = 50/300 (16%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A K I D +++ EI ++ L+
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN- 61
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA---------RVLFMQL 151
HPN+V L V E+ ++LV E + +F +A A + QL
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLS--------MDLKKFMDASALTGIPLPLIKSYLFQL 113
Query: 152 MQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFY 210
+Q + +CH V+HRDLKPEN+L+ T+ + IKLADFGLA + P ++ V + +Y
Sbjct: 114 LQGLAFCHSHRVLHRDLKPENLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWY 170
Query: 211 IAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF-- 262
APE+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 171 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 230
Query: 263 ---------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 231 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 145/300 (48%), Gaps = 50/300 (16%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A K I D +++ EI ++ L+
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN- 63
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA---------RVLFMQL 151
HPN+V L V E+ ++LV E + +F +A A + QL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLS--------MDLKKFMDASALTGIPLPLIKSYLFQL 115
Query: 152 MQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFY 210
+Q + +CH V+HRDLKPEN+L+ T+ + IKLADFGLA + P ++ V + +Y
Sbjct: 116 LQGLAFCHSHRVLHRDLKPENLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 211 IAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF-- 262
APE+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 232
Query: 263 ---------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 233 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 147/300 (49%), Gaps = 50/300 (16%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDE---RSVKLEIEIMTR 97
E++ +++G G +GV+ + + GE FA K I ++ +DE + EI I+
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEK----EDEGIPSTTIREISILKE 56
Query: 98 LSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-----GRFSEAEARVLFMQLM 152
L H N+V L V + + LV E L L+K G A+ +QL+
Sbjct: 57 LK-HSNIVKLYDVIHTKKRLVLVFE-----HLDQDLKKLLDVCEGGLESVTAKSFLLQLL 110
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYI 211
+ YCH+ V+HRDLKP+N+L+ + +K+ADFGLA + P + V + +Y
Sbjct: 111 NGIAYCHDRRVLHRDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEVVTLWYR 167
Query: 212 APEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGNTKS----RIFDAVRTADLRFPSN 265
AP+VL G Y+ D+WS G I +++G P F G +++ RIF + T + + N
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPN 227
Query: 266 -----------------PWDH----ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
PW+ + +S DL+ ML DP+QR+TA+Q L+H++ +
Sbjct: 228 VTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 147/300 (49%), Gaps = 50/300 (16%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDE---RSVKLEIEIMTR 97
E++ +++G G +GV+ + + GE FA K I ++ +DE + EI I+
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEK----EDEGIPSTTIREISILKE 56
Query: 98 LSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-----GRFSEAEARVLFMQLM 152
L H N+V L V + + LV E L L+K G A+ +QL+
Sbjct: 57 LK-HSNIVKLYDVIHTKKRLVLVFE-----HLDQDLKKLLDVCEGGLESVTAKSFLLQLL 110
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYI 211
+ YCH+ V+HRDLKP+N+L+ + +K+ADFGLA + P + V + +Y
Sbjct: 111 NGIAYCHDRRVLHRDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEVVTLWYR 167
Query: 212 APEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGNTKS----RIFDAVRTADLRFPSN 265
AP+VL G Y+ D+WS G I +++G P F G +++ RIF + T + + N
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPN 227
Query: 266 -----------------PWDH----ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
PW+ + +S DL+ ML DP+QR+TA+Q L+H++ +
Sbjct: 228 VTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 44/297 (14%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A K I D +++ EI ++ L+
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN- 67
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA------RVLFMQLMQV 154
HPN+V L V E+ ++LV E L L+KF S + QL+Q
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 122
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYIAP 213
+ +CH V+HRDLKP+N+L+ T+ + IKLADFGLA + P ++ V + +Y AP
Sbjct: 123 LAFCHSHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAP 179
Query: 214 EVLAGG--YNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF----- 262
E+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 180 EILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 239
Query: 263 ------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 240 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 44/297 (14%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A K I D +++ EI ++ L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN- 60
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA------RVLFMQLMQV 154
HPN+V L V E+ ++LV E L L+KF S + QL+Q
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYIAP 213
+ +CH V+HRDLKP+N+L+ T+ + IKLADFGLA + P ++ V + +Y AP
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 214 EVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF----- 262
E+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 263 ------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 44/297 (14%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A K I D +++ EI ++ L+
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN- 62
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA------RVLFMQLMQV 154
HPN+V L V E+ ++LV E L L+KF S + QL+Q
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYIAP 213
+ +CH V+HRDLKP+N+L+ T+ + IKLADFGLA + P ++ V + +Y AP
Sbjct: 118 LAFCHSHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAP 174
Query: 214 EVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF----- 262
E+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 234
Query: 263 ------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 235 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 44/297 (14%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A K I D +++ EI ++ L+
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN- 63
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA------RVLFMQLMQV 154
HPN+V L V E+ ++LV E L L+KF S + QL+Q
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYIAP 213
+ +CH V+HRDLKP+N+L+ T+ + IKLADFGLA + P ++ V + +Y AP
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 214 EVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF----- 262
E+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 235
Query: 263 ------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 236 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 44/297 (14%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A K I D +++ EI ++ L+
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN- 63
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA------RVLFMQLMQV 154
HPN+V L V E+ ++LV E L L+KF S + QL+Q
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 118
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYIAP 213
+ +CH V+HRDLKP+N+L+ T+ + IKLADFGLA + P ++ V + +Y AP
Sbjct: 119 LAFCHSHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAP 175
Query: 214 EVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF----- 262
E+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 235
Query: 263 ------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 236 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 44/297 (14%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A K I D +++ EI ++ L+
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN- 62
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA------RVLFMQLMQV 154
HPN+V L V E+ ++LV E L L+KF S + QL+Q
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 117
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYIAP 213
+ +CH V+HRDLKP+N+L+ T+ + IKLADFGLA + P ++ V + +Y AP
Sbjct: 118 LAFCHSHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAP 174
Query: 214 EVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF----- 262
E+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 234
Query: 263 ------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 235 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 44/297 (14%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A K I D +++ EI ++ L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN- 60
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA------RVLFMQLMQV 154
HPN+V L V E+ ++LV E L L+KF S + QL+Q
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYIAP 213
+ +CH V+HRDLKP+N+L+ T+ + IKLADFGLA + P ++ V + +Y AP
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 214 EVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF----- 262
E+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 263 ------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 44/297 (14%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A K I D +++ EI ++ L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN- 60
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA------RVLFMQLMQV 154
HPN+V L V E+ ++LV E L L+KF S + QL+Q
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYIAP 213
+ +CH V+HRDLKP+N+L+ T+ + IKLADFGLA + P ++ V + +Y AP
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 214 EVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF----- 262
E+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 263 ------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 44/297 (14%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A K I D +++ EI ++ L+
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN- 61
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA------RVLFMQLMQV 154
HPN+V L V E+ ++LV E L L+KF S + QL+Q
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYIAP 213
+ +CH V+HRDLKP+N+L+ T+ + IKLADFGLA + P ++ V + +Y AP
Sbjct: 117 LAFCHSHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAP 173
Query: 214 EVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF----- 262
E+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 233
Query: 263 ------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 234 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 44/297 (14%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A K I D +++ EI ++ L+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN- 59
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA------RVLFMQLMQV 154
HPN+V L V E+ ++LV E L L+KF S + QL+Q
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYIAP 213
+ +CH V+HRDLKP+N+L+ T+ + IKLADFGLA + P ++ V + +Y AP
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAP 171
Query: 214 EVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF----- 262
E+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231
Query: 263 ------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 232 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 44/297 (14%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A K I D +++ EI ++ L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN- 60
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA------RVLFMQLMQV 154
HPN+V L V E+ ++LV E L L+KF S + QL+Q
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYIAP 213
+ +CH V+HRDLKP+N+L+ T+ + IKLADFGLA + P ++ V + +Y AP
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAP 172
Query: 214 EVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF----- 262
E+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 263 ------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 44/297 (14%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A K I D +++ EI ++ L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN- 60
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA------RVLFMQLMQV 154
HPN+V L V E+ ++LV E L L+KF S + QL+Q
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYIAP 213
+ +CH V+HRDLKP+N+L+ T+ + IKLADFGLA + P ++ V + +Y AP
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 214 EVLAGG--YNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF----- 262
E+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 173 EILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 263 ------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 44/297 (14%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A K I D +++ EI ++ L+
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN- 61
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA------RVLFMQLMQV 154
HPN+V L V E+ ++LV E L L+KF S + QL+Q
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYIAP 213
+ +CH V+HRDLKP+N+L+ T+ + IKLADFGLA + P ++ V + +Y AP
Sbjct: 117 LAFCHSHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAP 173
Query: 214 EVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF----- 262
E+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 233
Query: 263 ------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 234 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 139/291 (47%), Gaps = 20/291 (6%)
Query: 13 PSRQPCKCYRVRSLAETILDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACK 72
P QP K R + N ++N R + +++G GQF + + G A K
Sbjct: 14 PQFQPQKALR------PDMGYNTLANFR----IEKKIGRGQFSEVYRAACLLDGVPVALK 63
Query: 73 SIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHR 132
+ L+ EI+++ +L+ HPNV+ A + +++ +++V+EL G+L
Sbjct: 64 KVQIFDLMDAKARADCIKEIDLLKQLN-HPNVIKYYASFIEDNELNIVLELADAGDLSRM 122
Query: 133 LEKFGR----FSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLAD 188
++ F + E F+QL + + H V+HRD+KP N+ + ++ +KL D
Sbjct: 123 IKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT---ATGVVKLGD 179
Query: 189 FGLATYIEPGQSLLGT-VGSPFYIAPE-VLAGGYNQAADVWSAGVILYILLSGMPPFWGN 246
GL + + + VG+P+Y++PE + GYN +D+WS G +LY + + PF+G+
Sbjct: 180 LGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 239
Query: 247 TKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLD 297
+ + +P P DH S+ + LV ++ DP +R V D
Sbjct: 240 KMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYD 290
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 44/297 (14%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A K I D +++ EI ++ L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN- 60
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA------RVLFMQLMQV 154
HPN+V L V E+ ++LV E L L+KF S + QL+Q
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYIAP 213
+ +CH V+HRDLKP+N+L+ T+ + IKLADFGLA + P ++ V + +Y AP
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 214 EVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF----- 262
E+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 263 ------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 44/297 (14%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A K I D +++ EI ++ L+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN- 59
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA------RVLFMQLMQV 154
HPN+V L V E+ ++LV E L L+KF S + QL+Q
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYIAP 213
+ +CH V+HRDLKP+N+L+ T+ + IKLADFGLA + P ++ V + +Y AP
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
Query: 214 EVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF----- 262
E+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231
Query: 263 ------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 232 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 44/297 (14%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A K I D +++ EI ++ L+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN- 59
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA------RVLFMQLMQV 154
HPN+V L V E+ ++LV E L L+KF S + QL+Q
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYIAP 213
+ +CH V+HRDLKP+N+L+ T+ + IKLADFGLA + P ++ V + +Y AP
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
Query: 214 EVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF----- 262
E+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231
Query: 263 ------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 232 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 44/297 (14%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A K I D +++ EI ++ L+
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN- 61
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA------RVLFMQLMQV 154
HPN+V L V E+ ++LV E L L+KF S + QL+Q
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 116
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYIAP 213
+ +CH V+HRDLKP+N+L+ T+ + IKLADFGLA + P ++ V + +Y AP
Sbjct: 117 LAFCHSHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAP 173
Query: 214 EVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF----- 262
E+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 233
Query: 263 ------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 234 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 44/297 (14%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A K I D +++ EI ++ L+
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN- 64
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA------RVLFMQLMQV 154
HPN+V L V E+ ++LV E L L+KF S + QL+Q
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 119
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYIAP 213
+ +CH V+HRDLKP+N+L+ T+ + IKLADFGLA + P ++ V + +Y AP
Sbjct: 120 LAFCHSHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAP 176
Query: 214 EVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF----- 262
E+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 236
Query: 263 ------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 237 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 293
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 44/297 (14%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A K I D +++ EI ++ L+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN- 59
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA------RVLFMQLMQV 154
HPN+V L V E+ ++LV E L L+KF S + QL+Q
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYIAP 213
+ +CH V+HRDLKP+N+L+ T+ + IKLADFGLA + P ++ V + +Y AP
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWYRAP 171
Query: 214 EVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF----- 262
E+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231
Query: 263 ------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 232 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 44/297 (14%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A K I D +++ EI ++ L+
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN- 67
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA------RVLFMQLMQV 154
HPN+V L V E+ ++LV E L L+KF S + QL+Q
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 122
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYIAP 213
+ +CH V+HRDLKP+N+L+ T+ + IKLADFGLA + P ++ V + +Y AP
Sbjct: 123 LAFCHSHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAP 179
Query: 214 EVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF----- 262
E+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 180 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 239
Query: 263 ------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 240 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/300 (29%), Positives = 147/300 (49%), Gaps = 50/300 (16%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDE---RSVKLEIEIMTR 97
E++ +++G G +GV+ + + GE FA K I ++ +DE + EI I+
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEK----EDEGIPSTTIREISILKE 56
Query: 98 LSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-----GRFSEAEARVLFMQLM 152
L H N+V L V + + LV E L L+K G A+ +QL+
Sbjct: 57 LK-HSNIVKLYDVIHTKKRLVLVFE-----HLDQDLKKLLDVCEGGLESVTAKSFLLQLL 110
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYI 211
+ YCH+ V+HRDLKP+N+L+ + +K+ADFGLA + P + + + +Y
Sbjct: 111 NGIAYCHDRRVLHRDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEIVTLWYR 167
Query: 212 APEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGNTKS----RIFDAVRTADLRFPSN 265
AP+VL G Y+ D+WS G I +++G P F G +++ RIF + T + + N
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPN 227
Query: 266 -----------------PWDH----ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
PW+ + +S DL+ ML DP+QR+TA+Q L+H++ +
Sbjct: 228 VTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN 287
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 44/297 (14%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A K I D +++ EI ++ L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN- 60
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA------RVLFMQLMQV 154
HPN+V L V E+ ++LV E L L+KF S + QL+Q
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYIAP 213
+ +CH V+HRDLKP+N+L+ T+ + IKLADFGLA + P ++ V + +Y AP
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 214 EVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF----- 262
E+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 263 ------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 44/297 (14%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A K I D +++ EI ++ L+
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN- 64
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA------RVLFMQLMQV 154
HPN+V L V E+ ++LV E L L+KF S + QL+Q
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 119
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYIAP 213
+ +CH V+HRDLKP+N+L+ T+ + IKLADFGLA + P ++ V + +Y AP
Sbjct: 120 LAFCHSHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAP 176
Query: 214 EVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF----- 262
E+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 236
Query: 263 ------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 237 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 293
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 131/261 (50%), Gaps = 22/261 (8%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVT---IDDER--SVKLEIEIMTRLSGHPN 103
LG G FG + DK + K I K++++ I+D + V LEI I++R+ H N
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVE-HAN 90
Query: 104 VVDLKAVYEDEDYVHLVMELCAGG-ELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIG 162
++ + ++E++ + LVME G +LF +++ R E A +F QL+ V Y
Sbjct: 91 IIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKD 150
Query: 163 VVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGGYNQ 222
++HRD+K ENI++A + IKL DFG A Y+E G+ G+ Y APEVL G +
Sbjct: 151 IIHRDIKDENIVIAEDFT---IKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYR 207
Query: 223 AADV--WSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMG 280
++ WS GV LY L+ PF + + V A +P +S LV G
Sbjct: 208 GPELEMWSLGVTLYTLVFEENPF-----CELEETVEAA-----IHPPYLVSKELMSLVSG 257
Query: 281 MLSTDPSQRLTARQVLDHSWM 301
+L P +R T +++ W+
Sbjct: 258 LLQPVPERRTTLEKLVTDPWV 278
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 139/267 (52%), Gaps = 33/267 (12%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E + + + +G G FG +++ K + +V+A K ++K ++ D E +IM +
Sbjct: 75 EDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMA-FAN 133
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRL------EKFGRFSEAEARVLFMQLMQV 154
P VV L ++D+ Y+++VME GG+L + + EK+ +F AE VL + +
Sbjct: 134 SPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEV-VLALDAI-- 190
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYI-EPGQSLLGT-VGSPFYIA 212
H +G++HRD+KP+N+LL +KLADFG + E G T VG+P YI+
Sbjct: 191 ----HSMGLIHRDVKPDNMLLDKHGH---LKLADFGTCMKMDETGMVHCDTAVGTPDYIS 243
Query: 213 PEVLA-----GGYNQAADVWSAGVILYILLSGMPPFWGN----TKSRIFDAVRTADLRFP 263
PEVL G Y + D WS GV L+ +L G PF+ + T S+I D + L FP
Sbjct: 244 PEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNS--LCFP 301
Query: 264 SNPWDHISDSAKDLVMGMLSTDPSQRL 290
+ IS AK+L+ L TD RL
Sbjct: 302 EDA--EISKHAKNLICAFL-TDREVRL 325
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 145/297 (48%), Gaps = 44/297 (14%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A K I D +++ EI ++ L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN- 60
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA------RVLFMQLMQV 154
HPN+V L V E+ ++LV E L L+KF S + QL+Q
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYIAP 213
+ +CH V+HRDLKP+N+L+ T+ + IKLADFGLA + P ++ V + +Y AP
Sbjct: 116 LSFCHSHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 214 EVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF----- 262
E+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 263 ------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 145/300 (48%), Gaps = 50/300 (16%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A K I D +++ EI ++ L+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN- 59
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA---------RVLFMQL 151
HPN+V L V E+ ++LV E H + F +A A + QL
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFE--------HVHQDLKTFMDASALTGIPLPLIKSYLFQL 111
Query: 152 MQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFY 210
+Q + +CH V+HRDLKP+N+L+ T+ + IKLADFGLA + P ++ V + +Y
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWY 168
Query: 211 IAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF-- 262
APE+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 169 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228
Query: 263 ---------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 229 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 144/300 (48%), Gaps = 50/300 (16%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A K I D +++ EI ++ L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN- 60
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA---------RVLFMQL 151
HPN+V L V E+ ++LV E + F +A A + QL
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLH--------QDLKDFMDASALTGIPLPLIKSYLFQL 112
Query: 152 MQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFY 210
+Q + +CH V+HRDLKPEN+L+ T+ + IKLADFGLA + P ++ V + +Y
Sbjct: 113 LQGLAFCHSHRVLHRDLKPENLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWY 169
Query: 211 IAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF-- 262
APE+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 170 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229
Query: 263 ---------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 230 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 140/297 (47%), Gaps = 41/297 (13%)
Query: 39 LRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDE---RSVKLEIEIM 95
L E++ +++G G +GV+ D G + A K I D +DE + EI ++
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLD----AEDEGIPSTAIREISLL 73
Query: 96 TRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVV 155
L HPN+V L V E + LV E E +++ ++ QL++ V
Sbjct: 74 KELH-HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGV 132
Query: 156 LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYIAPE 214
+CH+ ++HRDLKP+N+L+ S +KLADFGLA + P +S V + +Y AP+
Sbjct: 133 AHCHQHRILHRDLKPQNLLI---NSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPD 189
Query: 215 VLAGG--YNQAADVWSAGVILYILLSGMPPFWGNTKS----RIFDAVRTADLR------- 261
VL G Y+ + D+WS G I +++G P F G T +IF + T + R
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQE 249
Query: 262 -----------FPSNPWDHI----SDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
F PW I DL+ ML DP++R++AR ++H + D
Sbjct: 250 LPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 140/297 (47%), Gaps = 41/297 (13%)
Query: 39 LRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDE---RSVKLEIEIM 95
L E++ +++G G +GV+ D G + A K I D +DE + EI ++
Sbjct: 19 LMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLD----AEDEGIPSTAIREISLL 73
Query: 96 TRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVV 155
L HPN+V L V E + LV E E +++ ++ QL++ V
Sbjct: 74 KELH-HPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGV 132
Query: 156 LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYIAPE 214
+CH+ ++HRDLKP+N+L+ S +KLADFGLA + P +S V + +Y AP+
Sbjct: 133 AHCHQHRILHRDLKPQNLLI---NSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPD 189
Query: 215 VLAGG--YNQAADVWSAGVILYILLSGMPPFWGNTKS----RIFDAVRTADLR------- 261
VL G Y+ + D+WS G I +++G P F G T +IF + T + R
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQE 249
Query: 262 -----------FPSNPWDHI----SDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
F PW I DL+ ML DP++R++AR ++H + D
Sbjct: 250 LPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 144/300 (48%), Gaps = 50/300 (16%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A K I D +++ EI ++ L+
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN- 63
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA---------RVLFMQL 151
HPN+V L V E+ ++LV E + F +A A + QL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLH--------QDLKTFMDASALTGIPLPLIKSYLFQL 115
Query: 152 MQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFY 210
+Q + +CH V+HRDLKP+N+L+ T+ + IKLADFGLA + P ++ V + +Y
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 211 IAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF-- 262
APE+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 232
Query: 263 ---------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 233 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 144/297 (48%), Gaps = 44/297 (14%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A I D +++ EI ++ L+
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKELN- 60
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA------RVLFMQLMQV 154
HPN+V L V E+ ++LV E L L+KF S + QL+Q
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 115
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYIAP 213
+ +CH V+HRDLKP+N+L+ T+ + IKLADFGLA + P ++ V + +Y AP
Sbjct: 116 LAFCHSHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAP 172
Query: 214 EVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF----- 262
E+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 232
Query: 263 ------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 233 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/297 (30%), Positives = 144/297 (48%), Gaps = 44/297 (14%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A I D +++ EI ++ L+
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKELN- 59
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA------RVLFMQLMQV 154
HPN+V L V E+ ++LV E L L+KF S + QL+Q
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEF-----LHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 114
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYIAP 213
+ +CH V+HRDLKP+N+L+ T+ + IKLADFGLA + P ++ V + +Y AP
Sbjct: 115 LAFCHSHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYTHEVVTLWYRAP 171
Query: 214 EVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF----- 262
E+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT 231
Query: 263 ------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 232 SMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 144/300 (48%), Gaps = 50/300 (16%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A K I D +++ EI ++ L+
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN- 62
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA---------RVLFMQL 151
HPN+V L V E+ ++LV E + F +A A + QL
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLS--------MDLKDFMDASALTGIPLPLIKSYLFQL 114
Query: 152 MQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFY 210
+Q + +CH V+HRDLKP+N+L+ T+ + IKLADFGLA + P ++ V + +Y
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWY 171
Query: 211 IAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF-- 262
APE+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 172 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 231
Query: 263 ---------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 232 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 144/300 (48%), Gaps = 50/300 (16%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G +GV+ +K TGEV A K I D +++ EI ++ L+
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN- 63
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEA---------RVLFMQL 151
HPN+V L V E+ ++LV E + F +A A + QL
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLS--------MDLKDFMDASALTGIPLPLIKSYLFQL 115
Query: 152 MQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFY 210
+Q + +CH V+HRDLKP+N+L+ T+ + IKLADFGLA + P ++ V + +Y
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGA---IKLADFGLARAFGVPVRTYXHEVVTLWY 172
Query: 211 IAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF-- 262
APE+L G Y+ A D+WS G I +++ F G+++ RIF + T D
Sbjct: 173 RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 232
Query: 263 ---------PSNP-WDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
PS P W + + + L+ ML DP++R++A+ L H + D
Sbjct: 233 GVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 133/257 (51%), Gaps = 18/257 (7%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
RE F + + +G G FG + V K T ++A K + K ++ + + E +++ ++
Sbjct: 89 REDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVL--VN 146
Query: 100 GHPN-VVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARVLFMQLMQVVLY 157
G + L ++DE++++LVM+ GG+L L KF + E AR +++ +
Sbjct: 147 GDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDS 206
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT--VGSPFYIAPEV 215
H++ VHRD+KP+N+LL I+LADFG + ++ + VG+P YI+PE+
Sbjct: 207 IHQLHYVHRDIKPDNVLLDVNGH---IRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEI 263
Query: 216 L------AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLR--FPSNPW 267
L G Y D WS GV +Y +L G PF+ + + + + R FPS+
Sbjct: 264 LQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVT 323
Query: 268 DHISDSAKDLVMGMLST 284
D +S+ AKDL+ ++ +
Sbjct: 324 D-VSEEAKDLIQRLICS 339
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 133/257 (51%), Gaps = 18/257 (7%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
RE F + + +G G FG + V K T ++A K + K ++ + + E +++ ++
Sbjct: 73 REDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVL--VN 130
Query: 100 GHPN-VVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARVLFMQLMQVVLY 157
G + L ++DE++++LVM+ GG+L L KF + E AR +++ +
Sbjct: 131 GDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDS 190
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT--VGSPFYIAPEV 215
H++ VHRD+KP+N+LL I+LADFG + ++ + VG+P YI+PE+
Sbjct: 191 IHQLHYVHRDIKPDNVLLDVNGH---IRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEI 247
Query: 216 L------AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLR--FPSNPW 267
L G Y D WS GV +Y +L G PF+ + + + + R FPS+
Sbjct: 248 LQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVT 307
Query: 268 DHISDSAKDLVMGMLST 284
D +S+ AKDL+ ++ +
Sbjct: 308 D-VSEEAKDLIQRLICS 323
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 145/289 (50%), Gaps = 31/289 (10%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
Q+ RE F + + +G G FG + V K +VFA K + K ++ + + E ++
Sbjct: 68 QMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDV 127
Query: 95 MTRLSGHPN-VVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARVLFMQLM 152
+ ++G + L ++D++ ++LVM+ GG+L L KF R E AR +++
Sbjct: 128 L--VNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMV 185
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFG-LATYIEPG--QSLLGTVGSPF 209
+ H++ VHRD+KP+NIL+ I+LADFG +E G QS + VG+P
Sbjct: 186 IAIDSVHQLHYVHRDIKPDNILMDMNGH---IRLADFGSCLKLMEDGTVQSSVA-VGTPD 241
Query: 210 YIAPEVL------AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLR-- 261
YI+PE+L G Y D WS GV +Y +L G PF+ + + + R
Sbjct: 242 YISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ 301
Query: 262 FPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPEK 310
FP+ D +S++AKDL+ +RL + +H +GI+D +K
Sbjct: 302 FPTQVTD-VSENAKDLI---------RRLICSR--EHRLGQNGIEDFKK 338
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 135/264 (51%), Gaps = 27/264 (10%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDL 107
++G G G++ + ++K TG+ A K + + R + ++ R H NVVD+
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRK----QQRRELLFNEVVIMRDYHHDNVVDM 107
Query: 108 KAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRD 167
+ Y D + +VME GG L + R +E + + + +++ + Y H GV+HRD
Sbjct: 108 YSSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRD 166
Query: 168 LKPENILLATKASSSPIKLADFGLATYIE---PGQSLLGTVGSPFYIAPEVLAG-GYNQA 223
+K ++ILL S IKL+DFG + P + L VG+P+++APEV++ Y
Sbjct: 167 IKSDSILL---TSDGRIKLSDFGFCAQVSKEVPKRKXL--VGTPYWMAPEVISRLPYGTE 221
Query: 224 ADVWSAGVILYILLSGMPPFWG----NTKSRIFDAV--RTADLRFPSNPWDHISDSAKDL 277
D+WS G+++ ++ G PP++ RI D++ R DL +S +
Sbjct: 222 VDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLH-------KVSSVLRGF 274
Query: 278 VMGMLSTDPSQRLTARQVLDHSWM 301
+ ML +PSQR TA+++L H ++
Sbjct: 275 LDLMLVREPSQRATAQELLGHPFL 298
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 143/295 (48%), Gaps = 55/295 (18%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
+G G FGV+ F ++ +A ++ + D+R E++IM R+ HPNVVDLK
Sbjct: 48 IGNGSFGVV------FQAKLVESDEVAIKKV--LQDKRFKNRELQIM-RIVKHPNVVDLK 98
Query: 109 AVY------EDEDYVHLVMELCAGGELFHRLEK-FGRFSEAEARVL----FMQLMQVVLY 157
A + +DE +++LV+E E +R + + + + +L QL++ + Y
Sbjct: 99 AFFYSNGDKKDEVFLNLVLEYVP--ETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAY 156
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLA 217
H IG+ HRD+KP+N+LL S +KL DFG A + G+ + + S +Y APE++
Sbjct: 157 IHSIGICHRDIKPQNLLL--DPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIF 214
Query: 218 GG--YNQAADVWSAGVILYILLSGMPPFWGN--------------TKSRIFDAVRTAD-- 259
G Y D+WS G ++ L+ G P F G T SR + ++T +
Sbjct: 215 GATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSR--EQIKTMNPN 272
Query: 260 ---LRFPS---NPWDHI-----SDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
+FP +P+ + A DL+ +L PS RLTA + L H + +
Sbjct: 273 YMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDE 327
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 165/356 (46%), Gaps = 61/356 (17%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
+G G FGV+ +GE+ A K + + D+R E++IM +L H N+V L+
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVRLR 113
Query: 109 AVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAE-------ARVLFMQLMQVV 155
+ +DE Y++LV++ E +R+ + +S A+ ++ QL + +
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 156 LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEV 215
Y H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + + S +Y APE+
Sbjct: 170 AYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 227
Query: 216 LAGG--YNQAADVWSAGVILYILLSGMPPFWGN----------------TKSRIFDA-VR 256
+ G Y + DVWSAG +L LL G P F G+ T+ +I +
Sbjct: 228 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 287
Query: 257 TADLRFP---SNPWDHI-----SDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+ +FP ++PW + A L +L P+ RLT + HS+ D ++DP
Sbjct: 288 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF-DELRDP 346
Query: 309 E-KLSGNK----IEDCKEWDLGSG-SFSTQIIPRNQDISFGTGSPVFSDDESPAFT 358
KL + + + +L S +T +IP + I +P + S A T
Sbjct: 347 NVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTPTNATAASDANT 402
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 165/356 (46%), Gaps = 61/356 (17%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
+G G FGV+ +GE+ A K + + D+R E++IM +L H N+V L+
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVRLR 158
Query: 109 AVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAE-------ARVLFMQLMQVV 155
+ +DE Y++LV++ E +R+ + +S A+ ++ QL + +
Sbjct: 159 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAKQTLPVIYVKLYMYQLFRSL 214
Query: 156 LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEV 215
Y H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + + S +Y APE+
Sbjct: 215 AYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 272
Query: 216 LAGG--YNQAADVWSAGVILYILLSGMPPFWGN----------------TKSRIFDA-VR 256
+ G Y + DVWSAG +L LL G P F G+ T+ +I +
Sbjct: 273 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 332
Query: 257 TADLRFP---SNPWDHI-----SDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+ +FP ++PW + A L +L P+ RLT + HS+ D ++DP
Sbjct: 333 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF-DELRDP 391
Query: 309 E-KLSGNK----IEDCKEWDLGSG-SFSTQIIPRNQDISFGTGSPVFSDDESPAFT 358
KL + + + +L S +T +IP + I +P + S A T
Sbjct: 392 NVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTPTNATAASDANT 447
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 165/356 (46%), Gaps = 61/356 (17%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
+G G FGV+ +GE+ A K + + D+R E++IM +L H N+V L+
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVRLR 113
Query: 109 AVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAE-------ARVLFMQLMQVV 155
+ +DE Y++LV++ E +R+ + +S A+ ++ QL + +
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAKQTLPVIYVKLYMYQLFRSL 169
Query: 156 LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEV 215
Y H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + + S +Y APE+
Sbjct: 170 AYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 227
Query: 216 LAGG--YNQAADVWSAGVILYILLSGMPPFWGN----------------TKSRIFDA-VR 256
+ G Y + DVWSAG +L LL G P F G+ T+ +I +
Sbjct: 228 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 287
Query: 257 TADLRFP---SNPWDHI-----SDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+ +FP ++PW + A L +L P+ RLT + HS+ D ++DP
Sbjct: 288 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF-DELRDP 346
Query: 309 E-KLSGNK----IEDCKEWDLGSG-SFSTQIIPRNQDISFGTGSPVFSDDESPAFT 358
KL + + + +L S +T +IP + I +P + S A T
Sbjct: 347 NVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTPTNATAASDANT 402
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 165/356 (46%), Gaps = 61/356 (17%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
+G G FGV+ +GE+ A K + + D+R E++IM +L H N+V L+
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVRLR 107
Query: 109 AVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAE-------ARVLFMQLMQVV 155
+ +DE Y++LV++ E +R+ + +S A+ ++ QL + +
Sbjct: 108 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAKQTLPVIYVKLYMYQLFRSL 163
Query: 156 LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEV 215
Y H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + + S +Y APE+
Sbjct: 164 AYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 221
Query: 216 LAGG--YNQAADVWSAGVILYILLSGMPPFWGN----------------TKSRIFDA-VR 256
+ G Y + DVWSAG +L LL G P F G+ T+ +I +
Sbjct: 222 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 281
Query: 257 TADLRFP---SNPWDHI-----SDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+ +FP ++PW + A L +L P+ RLT + HS+ D ++DP
Sbjct: 282 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF-DELRDP 340
Query: 309 E-KLSGNK----IEDCKEWDLGSG-SFSTQIIPRNQDISFGTGSPVFSDDESPAFT 358
KL + + + +L S +T +IP + I +P + S A T
Sbjct: 341 NVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTPTNATAASDANT 396
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 144/301 (47%), Gaps = 55/301 (18%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
+G G FGV+ +GE+ A K + + D+R E++IM +L H N+V L+
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVRLR 117
Query: 109 AVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAE-------ARVLFMQLMQVV 155
+ +DE Y++LV++ E +R+ + +S A+ ++ QL + +
Sbjct: 118 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAKQTLPVIYVKLYMYQLFRSL 173
Query: 156 LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEV 215
Y H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + + S +Y APE+
Sbjct: 174 AYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 231
Query: 216 LAGG--YNQAADVWSAGVILYILLSGMPPFWGN----------------TKSRIFDA-VR 256
+ G Y + DVWSAG +L LL G P F G+ T+ +I +
Sbjct: 232 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 291
Query: 257 TADLRFP---SNPWDHI-----SDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+ +FP ++PW + A L +L P+ RLT + HS+ D ++DP
Sbjct: 292 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF-DELRDP 350
Query: 309 E 309
Sbjct: 351 N 351
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 165/356 (46%), Gaps = 61/356 (17%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
+G G FGV+ +GE+ A K + + D+R E++IM +L H N+V L+
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVRLR 115
Query: 109 AVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAE-------ARVLFMQLMQVV 155
+ +DE Y++LV++ E +R+ + +S A+ ++ QL + +
Sbjct: 116 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAKQTLPVIYVKLYMYQLFRSL 171
Query: 156 LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEV 215
Y H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + + S +Y APE+
Sbjct: 172 AYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 229
Query: 216 LAGG--YNQAADVWSAGVILYILLSGMPPFWGN----------------TKSRIFDA-VR 256
+ G Y + DVWSAG +L LL G P F G+ T+ +I +
Sbjct: 230 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 289
Query: 257 TADLRFP---SNPWDHI-----SDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+ +FP ++PW + A L +L P+ RLT + HS+ D ++DP
Sbjct: 290 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF-DELRDP 348
Query: 309 E-KLSGNK----IEDCKEWDLGSG-SFSTQIIPRNQDISFGTGSPVFSDDESPAFT 358
KL + + + +L S +T +IP + I +P + S A T
Sbjct: 349 NVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTPTNATAASDANT 404
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 165/356 (46%), Gaps = 61/356 (17%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
+G G FGV+ +GE+ A K + + D+R E++IM +L H N+V L+
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVRLR 84
Query: 109 AVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAE-------ARVLFMQLMQVV 155
+ +DE Y++LV++ E +R+ + +S A+ ++ QL + +
Sbjct: 85 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAKQTLPVIYVKLYMYQLFRSL 140
Query: 156 LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEV 215
Y H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + + S +Y APE+
Sbjct: 141 AYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 198
Query: 216 LAGG--YNQAADVWSAGVILYILLSGMPPFWGN----------------TKSRIFDA-VR 256
+ G Y + DVWSAG +L LL G P F G+ T+ +I +
Sbjct: 199 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 258
Query: 257 TADLRFP---SNPWDHI-----SDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+ +FP ++PW + A L +L P+ RLT + HS+ D ++DP
Sbjct: 259 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF-DELRDP 317
Query: 309 E-KLSGNK----IEDCKEWDLGSG-SFSTQIIPRNQDISFGTGSPVFSDDESPAFT 358
KL + + + +L S +T +IP + I +P + S A T
Sbjct: 318 NVKLPNGRDTPALFNFTTQELSSNPPLATILIPPHARIQAAASTPTNATAASDANT 373
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 127/273 (46%), Gaps = 31/273 (11%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F + ++LG G +G + K TG++ A K + + D + + EI IM +
Sbjct: 29 EVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE-----SDLQEIIKEISIMQQCDS 83
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGR-FSEAEARVLFMQLMQVVLYCH 159
P+VV Y + +VME C G + + + +E E + ++ + Y H
Sbjct: 84 -PHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH 142
Query: 160 EIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTV-GSPFYIAPEVLAG 218
+ +HRD+K NILL T+ + KLADFG+A + + V G+PF++APEV+
Sbjct: 143 FMRKIHRDIKAGNILLNTEGHA---KLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQE 199
Query: 219 -GYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNP---------WD 268
GYN AD+WS G+ + G PP+ R A P+NP W
Sbjct: 200 IGYNCVADIWSLGITAIEMAEGKPPYADIHPMR-------AIFMIPTNPPPTFRKPELW- 251
Query: 269 HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
SD+ D V L P QR TA Q+L H ++
Sbjct: 252 --SDNFTDFVKQCLVKSPEQRATATQLLQHPFV 282
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 144/300 (48%), Gaps = 55/300 (18%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
+G G FGV+ +GE+ A K + + D+R E++IM +L H N+V L+
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVRLR 91
Query: 109 AVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAE-------ARVLFMQLMQVV 155
+ +DE Y++LV++ E +R+ + +S A+ ++ QL + +
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAKQTLPVIYVKLYMYQLFRSL 147
Query: 156 LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEV 215
Y H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + + S +Y APE+
Sbjct: 148 AYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 205
Query: 216 LAGG--YNQAADVWSAGVILYILLSGMPPFWGN----------------TKSRIFDA-VR 256
+ G Y + DVWSAG +L LL G P F G+ T+ +I +
Sbjct: 206 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 265
Query: 257 TADLRFP---SNPWDHI-----SDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+ +FP ++PW + A L +L P+ RLT + HS+ D ++DP
Sbjct: 266 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF-DELRDP 324
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 144/300 (48%), Gaps = 55/300 (18%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
+G G FGV+ +GE+ A K + + D+R E++IM +L H N+V L+
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVRLR 91
Query: 109 AVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAE-------ARVLFMQLMQVV 155
+ +DE Y++LV++ E +R+ + +S A+ ++ QL + +
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAKQTLPVIYVKLYMYQLFRSL 147
Query: 156 LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEV 215
Y H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + + S +Y APE+
Sbjct: 148 AYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 205
Query: 216 LAGG--YNQAADVWSAGVILYILLSGMPPFWGN----------------TKSRIFDA-VR 256
+ G Y + DVWSAG +L LL G P F G+ T+ +I +
Sbjct: 206 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 265
Query: 257 TADLRFP---SNPWDHI-----SDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+ +FP ++PW + A L +L P+ RLT + HS+ D ++DP
Sbjct: 266 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF-DELRDP 324
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 144/300 (48%), Gaps = 55/300 (18%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
+G G FGV+ +GE+ A K + + D+R E++IM +L H N+V L+
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVRLR 98
Query: 109 AVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAE-------ARVLFMQLMQVV 155
+ +DE Y++LV++ E +R+ + +S A+ ++ QL + +
Sbjct: 99 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAKQTLPVIYVKLYMYQLFRSL 154
Query: 156 LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEV 215
Y H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + + S +Y APE+
Sbjct: 155 AYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 212
Query: 216 LAGG--YNQAADVWSAGVILYILLSGMPPFWGN----------------TKSRIFDA-VR 256
+ G Y + DVWSAG +L LL G P F G+ T+ +I +
Sbjct: 213 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 272
Query: 257 TADLRFP---SNPWDHI-----SDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+ +FP ++PW + A L +L P+ RLT + HS+ D ++DP
Sbjct: 273 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF-DELRDP 331
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 144/300 (48%), Gaps = 55/300 (18%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
+G G FGV+ +GE+ A K + + D+R E++IM +L H N+V L+
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVRLR 87
Query: 109 AVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAE-------ARVLFMQLMQVV 155
+ +DE Y++LV++ E +R+ + +S A+ ++ QL + +
Sbjct: 88 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAKQTLPVIYVKLYMYQLFRSL 143
Query: 156 LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEV 215
Y H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + + S +Y APE+
Sbjct: 144 AYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 201
Query: 216 LAGG--YNQAADVWSAGVILYILLSGMPPFWGN----------------TKSRIFDA-VR 256
+ G Y + DVWSAG +L LL G P F G+ T+ +I +
Sbjct: 202 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 261
Query: 257 TADLRFP---SNPWDHI-----SDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+ +FP ++PW + A L +L P+ RLT + HS+ D ++DP
Sbjct: 262 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF-DELRDP 320
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 144/300 (48%), Gaps = 55/300 (18%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
+G G FGV+ +GE+ A K + + D+R E++IM +L H N+V L+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVRLR 79
Query: 109 AVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAE-------ARVLFMQLMQVV 155
+ +DE Y++LV++ E +R+ + +S A+ ++ QL + +
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 156 LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEV 215
Y H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + + S +Y APE+
Sbjct: 136 AYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
Query: 216 LAGG--YNQAADVWSAGVILYILLSGMPPFWGN----------------TKSRIFDA-VR 256
+ G Y + DVWSAG +L LL G P F G+ T+ +I +
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 253
Query: 257 TADLRFP---SNPWDHI-----SDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+ +FP ++PW + A L +L P+ RLT + HS+ D ++DP
Sbjct: 254 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF-DELRDP 312
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 144/300 (48%), Gaps = 55/300 (18%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
+G G FGV+ +GE+ A K + + D+R E++IM +L H N+V L+
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVRLR 83
Query: 109 AVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAE-------ARVLFMQLMQVV 155
+ +DE Y++LV++ E +R+ + +S A+ ++ QL + +
Sbjct: 84 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAKQTLPVIYVKLYMYQLFRSL 139
Query: 156 LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEV 215
Y H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + + S +Y APE+
Sbjct: 140 AYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 197
Query: 216 LAGG--YNQAADVWSAGVILYILLSGMPPFWGN----------------TKSRIFDA-VR 256
+ G Y + DVWSAG +L LL G P F G+ T+ +I +
Sbjct: 198 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 257
Query: 257 TADLRFP---SNPWDHI-----SDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+ +FP ++PW + A L +L P+ RLT + HS+ D ++DP
Sbjct: 258 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF-DELRDP 316
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 144/300 (48%), Gaps = 55/300 (18%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
+G G FGV+ +GE+ A K + + D+R E++IM +L H N+V L+
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVRLR 92
Query: 109 AVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAE-------ARVLFMQLMQVV 155
+ +DE Y++LV++ E +R+ + +S A+ ++ QL + +
Sbjct: 93 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAKQTLPVIYVKLYMYQLFRSL 148
Query: 156 LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEV 215
Y H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + + S +Y APE+
Sbjct: 149 AYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 206
Query: 216 LAGG--YNQAADVWSAGVILYILLSGMPPFWGN----------------TKSRIFDA-VR 256
+ G Y + DVWSAG +L LL G P F G+ T+ +I +
Sbjct: 207 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 266
Query: 257 TADLRFP---SNPWDHI-----SDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+ +FP ++PW + A L +L P+ RLT + HS+ D ++DP
Sbjct: 267 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF-DELRDP 325
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 144/300 (48%), Gaps = 55/300 (18%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
+G G FGV+ +GE+ A K + + D+R E++IM +L H N+V L+
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVRLR 80
Query: 109 AVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAE-------ARVLFMQLMQVV 155
+ +DE Y++LV++ E +R+ + +S A+ ++ QL + +
Sbjct: 81 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAKQTLPVIYVKLYMYQLFRSL 136
Query: 156 LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEV 215
Y H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + + S +Y APE+
Sbjct: 137 AYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 194
Query: 216 LAGG--YNQAADVWSAGVILYILLSGMPPFWGN----------------TKSRIFDA-VR 256
+ G Y + DVWSAG +L LL G P F G+ T+ +I +
Sbjct: 195 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 254
Query: 257 TADLRFP---SNPWDHI-----SDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+ +FP ++PW + A L +L P+ RLT + HS+ D ++DP
Sbjct: 255 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF-DELRDP 313
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 144/300 (48%), Gaps = 55/300 (18%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
+G G FGV+ +GE+ A K + + D+R E++IM +L H N+V L+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVRLR 79
Query: 109 AVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAE-------ARVLFMQLMQVV 155
+ +DE Y++LV++ E +R+ + +S A+ ++ QL + +
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 156 LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEV 215
Y H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + + S +Y APE+
Sbjct: 136 AYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPEL 193
Query: 216 LAGG--YNQAADVWSAGVILYILLSGMPPFWGN----------------TKSRIFDA-VR 256
+ G Y + DVWSAG +L LL G P F G+ T+ +I +
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 253
Query: 257 TADLRFP---SNPWDHI-----SDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+ +FP ++PW + A L +L P+ RLT + HS+ D ++DP
Sbjct: 254 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF-DELRDP 312
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 142/298 (47%), Gaps = 51/298 (17%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
+G G FGV+ +GE+ A K + + D+R E++IM +L H N+V L+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVRLR 79
Query: 109 AVY----EDEDYVHLVMELCAGGELFHRLEKFGRFSEAE-------ARVLFMQLMQVVLY 157
+ E +D V+L + L E +R+ + +S A+ ++ QL + + Y
Sbjct: 80 YFFYSSGEKKDVVYLNLVLDYVPETVYRVAR--HYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLA 217
H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + + S +Y APE++
Sbjct: 138 IHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF 195
Query: 218 GG--YNQAADVWSAGVILYILLSGMPPFWGN----------------TKSRIFDA-VRTA 258
G Y + DVWSAG +L LL G P F G+ T+ +I +
Sbjct: 196 GATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYT 255
Query: 259 DLRFP---SNPWDHI-----SDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+ +FP ++PW + A L +L P+ RLT + HS+ D ++DP
Sbjct: 256 EFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF-DELRDP 312
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 144/300 (48%), Gaps = 55/300 (18%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
+G G FGV+ +GE+ A K + + D+R E++IM +L H N+V L+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKV-------LQDKRFKNRELQIMRKLD-HCNIVRLR 79
Query: 109 AVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAE-------ARVLFMQLMQVV 155
+ +DE Y++LV++ E +R+ + +S A+ ++ QL + +
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 156 LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEV 215
Y H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + + S +Y APE+
Sbjct: 136 AYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 193
Query: 216 LAGG--YNQAADVWSAGVILYILLSGMPPFWGN----------------TKSRIFDA-VR 256
+ G Y + DVWSAG +L LL G P F G+ T+ +I +
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 253
Query: 257 TADLRFP---SNPWDHI-----SDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+ +FP ++PW + A L +L P+ RLT + HS+ D ++DP
Sbjct: 254 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF-DELRDP 312
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 129/264 (48%), Gaps = 11/264 (4%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
++++ +++G G G + D TG+ A + + L + + EI +M R +
Sbjct: 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVM-REN 74
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCH 159
+PN+V+ Y D + +VME AGG L + + E + + + +Q + + H
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLH 133
Query: 160 EIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT-VGSPFYIAPEVLA- 217
V+HRD+K +NILL S +KL DFG I P QS T VG+P+++APEV+
Sbjct: 134 SNQVIHRDIKSDNILLGMDGS---VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR 190
Query: 218 GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDL 277
Y D+WS G++ ++ G PP+ R + T NP + +S +D
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFRDF 249
Query: 278 VMGMLSTDPSQRLTARQVLDHSWM 301
+ L D +R +A+++L H ++
Sbjct: 250 LNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/324 (28%), Positives = 146/324 (45%), Gaps = 63/324 (19%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS- 99
+RF + + G G FG +++ +K TG A K + I D R E++IM L+
Sbjct: 23 DRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV-------IQDPRFRNRELQIMQDLAV 75
Query: 100 -GHPNVVDLKAVY-------EDEDYVHLVMELCAGGELFHRL-EKFGRFSEAEA----RV 146
HPN+V L++ + + Y+++VME + HR + R A +V
Sbjct: 76 LHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP--DTLHRCCRNYYRRQVAPPPILIKV 133
Query: 147 LFMQLMQVV--LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT 204
QL++ + L+ + V HRD+KP N+L+ + +KL DFG A + P + +
Sbjct: 134 FLFQLIRSIGCLHLPSVNVCHRDIKPHNVLV--NEADGTLKLCDFGSAKKLSPSEPNVAY 191
Query: 205 VGSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWG-NTKSRIFDAVRTADLR 261
+ S +Y APE++ G Y A D+WS G I ++ G P F G N+ ++ + VR L
Sbjct: 192 ICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRV--LG 249
Query: 262 FPSN---------------------PW-----DHISDSAK---DLVMGMLSTDPSQRLTA 292
PS PW DH AK DL+ +L P +R+
Sbjct: 250 CPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKP 309
Query: 293 RQVLDHSWMGDGIQDPE-KLSGNK 315
+ L H + D + DP KL NK
Sbjct: 310 YEALCHPYF-DELHDPATKLPNNK 332
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 132/259 (50%), Gaps = 17/259 (6%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDL 107
++G G G++ + +K +G A K + + R + ++ R H NVV++
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRK----QQRRELLFNEVVIMRDYQHFNVVEM 107
Query: 108 KAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRD 167
Y + + ++ME GG L + + R +E + + ++Q + Y H GV+HRD
Sbjct: 108 YKSYLVGEELWVLMEFLQGGALTDIVSQV-RLNEEQIATVCEAVLQALAYLHAQGVIHRD 166
Query: 168 LKPENILLATKASSSPIKLADFGLATYIE---PGQSLLGTVGSPFYIAPEVLAGG-YNQA 223
+K ++ILL +KL+DFG I P + L VG+P+++APEV++ Y
Sbjct: 167 IKSDSILLTLDGR---VKLSDFGFCAQISKDVPKRKXL--VGTPYWMAPEVISRSLYATE 221
Query: 224 ADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDH-ISDSAKDLVMGML 282
D+WS G+++ ++ G PP++ ++ + +R D P H +S +D + ML
Sbjct: 222 VDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLR--DSPPPKLKNSHKVSPVLRDFLERML 279
Query: 283 STDPSQRLTARQVLDHSWM 301
DP +R TA+++LDH ++
Sbjct: 280 VRDPQERATAQELLDHPFL 298
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 127/256 (49%), Gaps = 17/256 (6%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH- 101
F + + +G G FG + C TG+++A K + K R + + ++ L IM L
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKR-IKMKQGETLALNERIMLSLVSTG 248
Query: 102 --PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCH 159
P +V + + D + +++L GG+L + L + G FSEA+ R +++ + + H
Sbjct: 249 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 308
Query: 160 EIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG 219
VV+RDLKP NILL ++++D GLA + +VG+ Y+APEVL G
Sbjct: 309 NRFVVYRDLKPANILLDEHGH---VRISDLGLACDFSKKKP-HASVGTHGYMAPEVLQKG 364
Query: 220 --YNQAADVWSAGVILYILLSGMPPFWGNT---KSRIFDAVRTADLRFPSNPWDHISDSA 274
Y+ +AD +S G +L+ LL G PF + K I T + P D S
Sbjct: 365 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP----DSFSPEL 420
Query: 275 KDLVMGMLSTDPSQRL 290
+ L+ G+L D ++RL
Sbjct: 421 RSLLEGLLQRDVNRRL 436
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 127/256 (49%), Gaps = 17/256 (6%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH- 101
F + + +G G FG + C TG+++A K + K R + + ++ L IM L
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKR-IKMKQGETLALNERIMLSLVSTG 249
Query: 102 --PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCH 159
P +V + + D + +++L GG+L + L + G FSEA+ R +++ + + H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 160 EIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG 219
VV+RDLKP NILL ++++D GLA + +VG+ Y+APEVL G
Sbjct: 310 NRFVVYRDLKPANILLDEHGH---VRISDLGLACDFSKKKP-HASVGTHGYMAPEVLQKG 365
Query: 220 --YNQAADVWSAGVILYILLSGMPPFWGNT---KSRIFDAVRTADLRFPSNPWDHISDSA 274
Y+ +AD +S G +L+ LL G PF + K I T + P D S
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP----DSFSPEL 421
Query: 275 KDLVMGMLSTDPSQRL 290
+ L+ G+L D ++RL
Sbjct: 422 RSLLEGLLQRDVNRRL 437
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 122/250 (48%), Gaps = 33/250 (13%)
Query: 42 RFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH 101
++ L ++LG G +G++ D+ TGEV A K I + D +R+ + EI I+T LSGH
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFR-EIMILTELSGH 68
Query: 102 PNVVDLKAVYE-DEDY-VHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCH 159
N+V+L V D D V+LV + H + + + + QL++V+ Y H
Sbjct: 69 ENIVNLLNVLRADNDRDVYLVFDYMETD--LHAVIRANILEPVHKQYVVYQLIKVIKYLH 126
Query: 160 EIGVVHRDLKPENILLATKASSSPIKLADFGLA----------------------TYIEP 197
G++HRD+KP NILL + +K+ADFGL+ + +
Sbjct: 127 SGGLLHRDMKPSNILLNAECH---VKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDD 183
Query: 198 GQSLLGTVGSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAV 255
L V + +Y APE+L G Y + D+WS G IL +L G P F G++ + +
Sbjct: 184 QPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERI 243
Query: 256 RTADLRFPSN 265
+ FPSN
Sbjct: 244 -IGVIDFPSN 252
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 127/256 (49%), Gaps = 17/256 (6%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH- 101
F + + +G G FG + C TG+++A K + K R + + ++ L IM L
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKR-IKMKQGETLALNERIMLSLVSTG 249
Query: 102 --PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCH 159
P +V + + D + +++L GG+L + L + G FSEA+ R +++ + + H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 160 EIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG 219
VV+RDLKP NILL ++++D GLA + +VG+ Y+APEVL G
Sbjct: 310 NRFVVYRDLKPANILLDEHGH---VRISDLGLACDFSKKKP-HASVGTHGYMAPEVLQKG 365
Query: 220 --YNQAADVWSAGVILYILLSGMPPFWGNT---KSRIFDAVRTADLRFPSNPWDHISDSA 274
Y+ +AD +S G +L+ LL G PF + K I T + P D S
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP----DSFSPEL 421
Query: 275 KDLVMGMLSTDPSQRL 290
+ L+ G+L D ++RL
Sbjct: 422 RSLLEGLLQRDVNRRL 437
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 127/256 (49%), Gaps = 17/256 (6%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH- 101
F + + +G G FG + C TG+++A K + K R + + ++ L IM L
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKR-IKMKQGETLALNERIMLSLVSTG 249
Query: 102 --PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCH 159
P +V + + D + +++L GG+L + L + G FSEA+ R +++ + + H
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH 309
Query: 160 EIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG 219
VV+RDLKP NILL ++++D GLA + +VG+ Y+APEVL G
Sbjct: 310 NRFVVYRDLKPANILLDEHGH---VRISDLGLACDFSKKKP-HASVGTHGYMAPEVLQKG 365
Query: 220 --YNQAADVWSAGVILYILLSGMPPFWGNT---KSRIFDAVRTADLRFPSNPWDHISDSA 274
Y+ +AD +S G +L+ LL G PF + K I T + P D S
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP----DSFSPEL 421
Query: 275 KDLVMGMLSTDPSQRL 290
+ L+ G+L D ++RL
Sbjct: 422 RSLLEGLLQRDVNRRL 437
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 146/300 (48%), Gaps = 20/300 (6%)
Query: 11 SEPSRQPCKC--YRVRSLAETILDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEV 68
S P R+P + + R+ + ++D + + F+ ++G G G++ + + + +G++
Sbjct: 2 SSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFI---KIGEGSTGIVCIATVRSSGKL 58
Query: 69 FACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGE 128
A K + + R + ++ R H NVV++ Y D + +VME GG
Sbjct: 59 VAVKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 114
Query: 129 LFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLAD 188
L + R +E + + + ++Q + H GV+HRD+K ++ILL +KL+D
Sbjct: 115 LTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSD 170
Query: 189 FGLATYIE---PGQSLLGTVGSPFYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFW 244
FG + P + L VG+P+++APE+++ Y D+WS G+++ ++ G PP++
Sbjct: 171 FGFCAQVSKEVPRRKXL--VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYF 228
Query: 245 GNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ +R +L +S S K + +L DP+QR TA ++L H ++
Sbjct: 229 NEPPLKAMKMIRD-NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 287
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 145/298 (48%), Gaps = 20/298 (6%)
Query: 13 PSRQPCKCY--RVRSLAETILDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFA 70
P R+P + + R+ + ++D + + F+ ++G G G++ + + + +G++ A
Sbjct: 124 PQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFI---KIGEGSTGIVCIATVRSSGKLVA 180
Query: 71 CKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELF 130
K + + R + ++ R H NVV++ Y D + +VME GG L
Sbjct: 181 VKKMD----LRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 236
Query: 131 HRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFG 190
+ R +E + + + ++Q + H GV+HRD+K ++ILL +KL+DFG
Sbjct: 237 D-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSDFG 292
Query: 191 LATYIE---PGQSLLGTVGSPFYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGN 246
+ P + L VG+P+++APE+++ Y D+WS G+++ ++ G PP++
Sbjct: 293 FCAQVSKEVPRRKXL--VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 350
Query: 247 TKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ +R +L +S S K + +L DP+QR TA ++L H ++
Sbjct: 351 PPLKAMKMIRD-NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 407
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 128/264 (48%), Gaps = 11/264 (4%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
++++ +++G G G + D TG+ A + + L + + EI +M R +
Sbjct: 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVM-REN 74
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCH 159
+PN+V+ Y D + +VME AGG L + + E + + + +Q + + H
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLH 133
Query: 160 EIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLG-TVGSPFYIAPEVLA- 217
V+HRD+K +NILL S +KL DFG I P QS VG+P+++APEV+
Sbjct: 134 SNQVIHRDIKSDNILLGMDGS---VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTR 190
Query: 218 GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDL 277
Y D+WS G++ ++ G PP+ R + T NP + +S +D
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFRDF 249
Query: 278 VMGMLSTDPSQRLTARQVLDHSWM 301
+ L D +R +A+++L H ++
Sbjct: 250 LNRCLEMDVEKRGSAKELLQHQFL 273
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 128/264 (48%), Gaps = 11/264 (4%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
++++ +++G G G + D TG+ A + + L + + EI +M R +
Sbjct: 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVM-REN 74
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCH 159
+PN+V+ Y D + +VME AGG L + + E + + + +Q + + H
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLH 133
Query: 160 EIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLG-TVGSPFYIAPEVLA- 217
V+HRD+K +NILL S +KL DFG I P QS VG+P+++APEV+
Sbjct: 134 SNQVIHRDIKSDNILLGMDGS---VKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTR 190
Query: 218 GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDL 277
Y D+WS G++ ++ G PP+ R + T NP + +S +D
Sbjct: 191 KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFRDF 249
Query: 278 VMGMLSTDPSQRLTARQVLDHSWM 301
+ L D +R +A+++L H ++
Sbjct: 250 LNRCLDMDVEKRGSAKELLQHQFL 273
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 145/298 (48%), Gaps = 20/298 (6%)
Query: 13 PSRQPCKC--YRVRSLAETILDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFA 70
P R+P + + R+ + ++D + + F+ ++G G G++ + + + +G++ A
Sbjct: 47 PQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFI---KIGEGSTGIVCIATVRSSGKLVA 103
Query: 71 CKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELF 130
K + + R + ++ R H NVV++ Y D + +VME GG L
Sbjct: 104 VKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 159
Query: 131 HRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFG 190
+ R +E + + + ++Q + H GV+HRD+K ++ILL +KL+DFG
Sbjct: 160 D-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSDFG 215
Query: 191 LATYIE---PGQSLLGTVGSPFYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGN 246
+ P + L VG+P+++APE+++ Y D+WS G+++ ++ G PP++
Sbjct: 216 FCAQVSKEVPRRKXL--VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 273
Query: 247 TKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ +R +L +S S K + +L DP+QR TA ++L H ++
Sbjct: 274 PPLKAMKMIRD-NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 330
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 145/298 (48%), Gaps = 20/298 (6%)
Query: 13 PSRQPCKC--YRVRSLAETILDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFA 70
P R+P + + R+ + ++D + + F+ ++G G G++ + + + +G++ A
Sbjct: 2 PQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFI---KIGEGSTGIVCIATVRSSGKLVA 58
Query: 71 CKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELF 130
K + + R + ++ R H NVV++ Y D + +VME GG L
Sbjct: 59 VKKMDLRK----QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 114
Query: 131 HRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFG 190
+ R +E + + + ++Q + H GV+HRD+K ++ILL +KL+DFG
Sbjct: 115 D-IVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSDFG 170
Query: 191 LATYIE---PGQSLLGTVGSPFYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGN 246
+ P + L VG+P+++APE+++ Y D+WS G+++ ++ G PP++
Sbjct: 171 FCAQVSKEVPRRKXL--VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE 228
Query: 247 TKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ +R +L +S S K + +L DP+QR TA ++L H ++
Sbjct: 229 PPLKAMKMIRD-NLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 285
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 102/212 (48%), Gaps = 13/212 (6%)
Query: 45 LGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNV 104
+ ++LG G FG + + TGE A K + L + ER LEI+IM +L+ HPNV
Sbjct: 18 MKERLGTGGFGYVLRWIHQDTGEQVAIKQ-CRQELSPKNRERWC-LEIQIMKKLN-HPNV 74
Query: 105 VDLKAVYED------EDYVHLVMELCAGGELFHRLEKFGR---FSEAEARVLFMQLMQVV 155
V + V + D L ME C GG+L L +F E R L + +
Sbjct: 75 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSAL 134
Query: 156 LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEV 215
Y HE ++HRDLKPENI+L K+ D G A ++ G+ VG+ Y+APE+
Sbjct: 135 RYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPEL 194
Query: 216 L-AGGYNQAADVWSAGVILYILLSGMPPFWGN 246
L Y D WS G + + ++G PF N
Sbjct: 195 LEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 226
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 101 bits (252), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 102/212 (48%), Gaps = 13/212 (6%)
Query: 45 LGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNV 104
+ ++LG G FG + + TGE A K + L + ER LEI+IM +L+ HPNV
Sbjct: 19 MKERLGTGGFGYVLRWIHQDTGEQVAIKQ-CRQELSPKNRERWC-LEIQIMKKLN-HPNV 75
Query: 105 VDLKAVYED------EDYVHLVMELCAGGELFHRLEKFGR---FSEAEARVLFMQLMQVV 155
V + V + D L ME C GG+L L +F E R L + +
Sbjct: 76 VSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSAL 135
Query: 156 LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEV 215
Y HE ++HRDLKPENI+L K+ D G A ++ G+ VG+ Y+APE+
Sbjct: 136 RYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPEL 195
Query: 216 L-AGGYNQAADVWSAGVILYILLSGMPPFWGN 246
L Y D WS G + + ++G PF N
Sbjct: 196 LEQKKYTVTVDYWSFGTLAFECITGFRPFLPN 227
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 101 bits (252), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 127/263 (48%), Gaps = 21/263 (7%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDL- 107
+G G +G + K G++ K + + + + V E+ ++ L HPN+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVS-EVNLLRELK-HPNIVRYY 71
Query: 108 -KAVYEDEDYVHLVMELCAGGELFHRLEKFGR----FSEAEARVLFMQLMQVVLYCHEIG 162
+ + +++VME C GG+L + K + E + QL + CH
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 163 -----VVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT-VGSPFYIAPEVL 216
V+HRDLKP N+ L K + +KL DFGLA + S T VG+P+Y++PE +
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQN---VKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQM 188
Query: 217 AG-GYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
YN+ +D+WS G +LY L + MPPF ++ + +R +F P+ + SD
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG--KFRRIPYRY-SDELN 245
Query: 276 DLVMGMLSTDPSQRLTARQVLDH 298
+++ ML+ R + ++L++
Sbjct: 246 EIITRMLNLKDYHRPSVEEILEN 268
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 129/264 (48%), Gaps = 11/264 (4%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
++++ +++G G G + D TG+ A + + L + + EI +M R +
Sbjct: 20 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVM-REN 75
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCH 159
+PN+V+ Y D + +VME AGG L + + E + + + +Q + + H
Sbjct: 76 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLH 134
Query: 160 EIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT-VGSPFYIAPEVLA- 217
V+HR++K +NILL S +KL DFG I P QS T VG+P+++APEV+
Sbjct: 135 SNQVIHRNIKSDNILLGMDGS---VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTR 191
Query: 218 GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDL 277
Y D+WS G++ ++ G PP+ R + T NP + +S +D
Sbjct: 192 KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFRDF 250
Query: 278 VMGMLSTDPSQRLTARQVLDHSWM 301
+ L D +R +A++++ H ++
Sbjct: 251 LNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 128/264 (48%), Gaps = 11/264 (4%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
++++ +++G G G + D TG+ A + + L + + EI +M R +
Sbjct: 20 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM---NLQQQPKKELIINEILVM-REN 75
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCH 159
+PN+V+ Y D + +VME AGG L + + E + + + +Q + + H
Sbjct: 76 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLH 134
Query: 160 EIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLG-TVGSPFYIAPEVLA- 217
V+HRD+K +NILL S +KL DFG I P QS VG+P+++APEV+
Sbjct: 135 SNQVIHRDIKSDNILLGMDGS---VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTR 191
Query: 218 GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDL 277
Y D+WS G++ ++ G PP+ R + T NP + +S +D
Sbjct: 192 KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EKLSAIFRDF 250
Query: 278 VMGMLSTDPSQRLTARQVLDHSWM 301
+ L D +R +A++++ H ++
Sbjct: 251 LNRCLEMDVEKRGSAKELIQHQFL 274
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/277 (29%), Positives = 133/277 (48%), Gaps = 28/277 (10%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEV-FACKSIAKDRLV---TIDDERSVKLEIEIMTRL 98
+ LG LG G FG + + T + A K I ++R++ + D + LE+ ++ ++
Sbjct: 33 YRLGPLLGKGGFGTV-FAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKV 91
Query: 99 S---GHPNVVDLKAVYEDEDYVHLVMEL-CAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
GHP V+ L +E ++ LV+E +LF + + G E +R F Q++
Sbjct: 92 GAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAA 151
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYI--EPGQSLLGTVGSPFYIA 212
+ +CH GVVHRD+K ENIL+ + + KL DFG + EP GT Y
Sbjct: 152 IQHCHSRGVVHRDIKDENILIDLRRGCA--KLIDFGSGALLHDEPYTDFDGTR---VYSP 206
Query: 213 PEVLAGGYNQA--ADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHI 270
PE ++ A A VWS G++LY ++ G PF + + + A+L FP+ H+
Sbjct: 207 PEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------ILEAELHFPA----HV 256
Query: 271 SDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQD 307
S L+ L+ PS R + ++L WM +D
Sbjct: 257 SPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAED 293
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 117/237 (49%), Gaps = 15/237 (6%)
Query: 30 ILDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVK 89
++ ++ R+ F + + +G G F + V K TG+V+A K + K ++ + +
Sbjct: 50 VVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFR 109
Query: 90 LEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAE-ARVLF 148
E +++ + L ++DE+Y++LVME GG+L L KFG AE AR
Sbjct: 110 EERDVLVN-GDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYL 168
Query: 149 MQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSL--LGTVG 206
+++ + H +G VHRD+KP+NILL I+LADFG + ++ L VG
Sbjct: 169 AEIVMAIDSVHRLGYVHRDIKPDNILL---DRCGHIRLADFGSCLKLRADGTVRSLVAVG 225
Query: 207 SPFYIAPEVLAG--------GYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAV 255
+P Y++PE+L Y D W+ GV Y + G PF+ ++ + + +
Sbjct: 226 TPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKI 282
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 138/289 (47%), Gaps = 47/289 (16%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVK----LEIEIMTRLSGHPNV 104
+G G +G++ C +K TG + A K + + DD++ VK EI+++ +L H N+
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIK-----KFLESDDDKMVKKIAMREIKLLKQLR-HENL 86
Query: 105 VDLKAVYEDEDYVHLVMELCAGGELFHRLEKF--GRFSEAEARVLFMQLMQVVLYCHEIG 162
V+L V + + +LV E + LE F G + + LF Q++ + +CH
Sbjct: 87 VNLLEVCKKKKRWYLVFEF-VDHTILDDLELFPNGLDYQVVQKYLF-QIINGIGFCHSHN 144
Query: 163 VVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYIAPEVLAG--G 219
++HRD+KPENIL+ + S +KL DFG A T PG+ V + +Y APE+L G
Sbjct: 145 IIHRDIKPENILV---SQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVK 201
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNT------------------------KSRIFDAV 255
Y +A DVW+ G ++ + G P F G++ K+ +F V
Sbjct: 202 YGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGV 261
Query: 256 RTADL--RFP-SNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
R ++ R P + +S+ DL L DP +R ++L H +
Sbjct: 262 RLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFF 310
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 142/300 (47%), Gaps = 55/300 (18%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
+G G FGV+ +GE+ A K + + + E++IM +L H N+V L+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-------NRELQIMRKLD-HCNIVRLR 79
Query: 109 AVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAE-------ARVLFMQLMQVV 155
+ +DE Y++LV++ E +R+ + +S A+ ++ QL + +
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 156 LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEV 215
Y H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + + S +Y APE+
Sbjct: 136 AYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 193
Query: 216 LAGG--YNQAADVWSAGVILYILLSGMPPFWGN----------------TKSRIFDA-VR 256
+ G Y + DVWSAG +L LL G P F G+ T+ +I +
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 253
Query: 257 TADLRFP---SNPWDHI-----SDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+ +FP ++PW + A L +L P+ RLT + HS+ D ++DP
Sbjct: 254 YTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF-DELRDP 312
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 128/251 (50%), Gaps = 10/251 (3%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
LG G FG + C K TG+++ACK + K RL + +E +I+ ++ +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIVSLA 251
Query: 109 AVYEDEDYVHLVMELCAGGELFHRL----EKFGRFSEAEARVLFMQLMQVVLYCHEIGVV 164
+E + + LVM + GG++ + + E F E A Q++ + + H+ ++
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 165 HRDLKPENILLATKASSSPIKLADFGLATYIEPGQS-LLGTVGSPFYIAPEVLAG-GYNQ 222
+RDLKPEN+LL + ++++D GLA ++ GQ+ G G+P ++APE+L G Y+
Sbjct: 312 YRDLKPENVLLDDDGN---VRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 223 AADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGML 282
+ D ++ GV LY +++ PF + ++ L D S ++KD +L
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALL 428
Query: 283 STDPSQRLTAR 293
DP +RL R
Sbjct: 429 QKDPEKRLGFR 439
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 128/251 (50%), Gaps = 10/251 (3%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
LG G FG + C K TG+++ACK + K RL + +E +I+ ++ +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIVSLA 251
Query: 109 AVYEDEDYVHLVMELCAGGELFHRL----EKFGRFSEAEARVLFMQLMQVVLYCHEIGVV 164
+E + + LVM + GG++ + + E F E A Q++ + + H+ ++
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 165 HRDLKPENILLATKASSSPIKLADFGLATYIEPGQS-LLGTVGSPFYIAPEVLAG-GYNQ 222
+RDLKPEN+LL + ++++D GLA ++ GQ+ G G+P ++APE+L G Y+
Sbjct: 312 YRDLKPENVLLDDDGN---VRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 223 AADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGML 282
+ D ++ GV LY +++ PF + ++ L D S ++KD +L
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALL 428
Query: 283 STDPSQRLTAR 293
DP +RL R
Sbjct: 429 QKDPEKRLGFR 439
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 128/251 (50%), Gaps = 10/251 (3%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
LG G FG + C K TG+++ACK + K RL + +E +I+ ++ +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIVSLA 251
Query: 109 AVYEDEDYVHLVMELCAGGELFHRL----EKFGRFSEAEARVLFMQLMQVVLYCHEIGVV 164
+E + + LVM + GG++ + + E F E A Q++ + + H+ ++
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 165 HRDLKPENILLATKASSSPIKLADFGLATYIEPGQS-LLGTVGSPFYIAPEVLAG-GYNQ 222
+RDLKPEN+LL + ++++D GLA ++ GQ+ G G+P ++APE+L G Y+
Sbjct: 312 YRDLKPENVLLDDDGN---VRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 223 AADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGML 282
+ D ++ GV LY +++ PF + ++ L D S ++KD +L
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALL 428
Query: 283 STDPSQRLTAR 293
DP +RL R
Sbjct: 429 QKDPEKRLGFR 439
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 128/251 (50%), Gaps = 10/251 (3%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
LG G FG + C K TG+++ACK + K RL + +E +I+ ++ +V L
Sbjct: 193 LGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSR-FIVSLA 251
Query: 109 AVYEDEDYVHLVMELCAGGELFHRL----EKFGRFSEAEARVLFMQLMQVVLYCHEIGVV 164
+E + + LVM + GG++ + + E F E A Q++ + + H+ ++
Sbjct: 252 YAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNII 311
Query: 165 HRDLKPENILLATKASSSPIKLADFGLATYIEPGQS-LLGTVGSPFYIAPEVLAG-GYNQ 222
+RDLKPEN+LL + ++++D GLA ++ GQ+ G G+P ++APE+L G Y+
Sbjct: 312 YRDLKPENVLLDDDGN---VRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDF 368
Query: 223 AADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGML 282
+ D ++ GV LY +++ PF + ++ L D S ++KD +L
Sbjct: 369 SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDKFSPASKDFCEALL 428
Query: 283 STDPSQRLTAR 293
DP +RL R
Sbjct: 429 QKDPEKRLGFR 439
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 132/273 (48%), Gaps = 18/273 (6%)
Query: 34 NQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIE 93
N I++ E F +++G G FG + D T +V A K I D D+ ++ EI
Sbjct: 16 NNIADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKII--DLEEAEDEIEDIQQEIT 73
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQ 153
++++ V Y + ++ME GG L + G F E + + ++++
Sbjct: 74 VLSQCDSS-YVTKYYGSYLKGSKLWIIMEYLGGGSALDLL-RAGPFDEFQIATMLKEILK 131
Query: 154 VVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT-VGSPFYIA 212
+ Y H +HRD+K N+LL+ + +KLADFG+A + Q T VG+PF++A
Sbjct: 132 GLDYLHSEKKIHRDIKAANVLLSEQGD---VKLADFGVAGQLTDTQIKRNTFVGTPFWMA 188
Query: 213 PEVL-AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHIS 271
PEV+ Y+ AD+WS G+ L G PP + +R L +NP +
Sbjct: 189 PEVIQQSAYDSKADIWSLGITAIELAKGEPP------NSDMHPMRVLFLIPKNNPPTLVG 242
Query: 272 D---SAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
D S K+ + L+ DPS R TA+++L H ++
Sbjct: 243 DFTKSFKEFIDACLNKDPSFRPTAKELLKHKFI 275
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 126/263 (47%), Gaps = 21/263 (7%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDL- 107
+G G +G + K G++ K + + + + V E+ ++ L HPN+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVS-EVNLLRELK-HPNIVRYY 71
Query: 108 -KAVYEDEDYVHLVMELCAGGELFHRLEKFGR----FSEAEARVLFMQLMQVVLYCHEIG 162
+ + +++VME C GG+L + K + E + QL + CH
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 163 -----VVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT-VGSPFYIAPEVL 216
V+HRDLKP N+ L K + +KL DFGLA + S VG+P+Y++PE +
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQN---VKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQM 188
Query: 217 AG-GYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
YN+ +D+WS G +LY L + MPPF ++ + +R +F P+ + SD
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG--KFRRIPYRY-SDELN 245
Query: 276 DLVMGMLSTDPSQRLTARQVLDH 298
+++ ML+ R + ++L++
Sbjct: 246 EIITRMLNLKDYHRPSVEEILEN 268
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 139/285 (48%), Gaps = 18/285 (6%)
Query: 24 RSLAETILDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTID 83
R+ + ++D + + F+ ++G G G++ + + + +G++ A K + +
Sbjct: 6 RAALQLVVDPGDPRSYLDNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRK----Q 58
Query: 84 DERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAE 143
R + ++ R H NVV++ Y D + +VME GG L + R +E +
Sbjct: 59 QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQ 117
Query: 144 ARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIE---PGQS 200
+ + ++Q + H GV+HRD+K ++ILL +KL+DFG + P +
Sbjct: 118 IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSDFGFCAQVSKEVPRRK 174
Query: 201 LLGTVGSPFYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTAD 259
L VG+P+++APE+++ Y D+WS G+++ ++ G PP++ + +R +
Sbjct: 175 XL--VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD-N 231
Query: 260 LRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
L +S S K + +L DP+QR TA ++L H ++
Sbjct: 232 LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 276
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 129/284 (45%), Gaps = 33/284 (11%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDD--ERSVKLEIEIMTRLSGHPNVVD 106
LG GQF + DK T ++ A K I D R+ EI+++ LS HPN++
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS-HPNIIG 76
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
L + + + LV + + + + + + +Q + Y H+ ++HR
Sbjct: 77 LLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHR 136
Query: 167 DLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYIAPEVLAGG--YNQA 223
DLKP N+LL + +KLADFGLA ++ P ++ V + +Y APE+L G Y
Sbjct: 137 DLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVG 193
Query: 224 ADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRT------ADL----------RFP 263
D+W+ G IL LL +P G++ +RIF+ + T D+ FP
Sbjct: 194 VDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFP 253
Query: 264 SNPWDHI----SDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
P HI D DL+ G+ +P R+TA Q L + +
Sbjct: 254 GIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN 297
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 139/285 (48%), Gaps = 18/285 (6%)
Query: 24 RSLAETILDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTID 83
R+ + ++D + + F+ ++G G G++ + + + +G++ A K + +
Sbjct: 10 RAALQLVVDPGDPRSYLDNFI---KIGEGSTGIVCIATVRSSGKLVAVKKMDLRK----Q 62
Query: 84 DERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAE 143
R + ++ R H NVV++ Y D + +VME GG L + R +E +
Sbjct: 63 QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQ 121
Query: 144 ARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIE---PGQS 200
+ + ++Q + H GV+HRD+K ++ILL +KL+DFG + P +
Sbjct: 122 IAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSDFGFCAQVSKEVPRRK 178
Query: 201 LLGTVGSPFYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTAD 259
L VG+P+++APE+++ Y D+WS G+++ ++ G PP++ + +R +
Sbjct: 179 XL--VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD-N 235
Query: 260 LRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
L +S S K + +L DP+QR TA ++L H ++
Sbjct: 236 LPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 280
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 146/314 (46%), Gaps = 58/314 (18%)
Query: 36 ISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAK-DR-LVTIDDERSVKLEIE 93
+ N+ F L LG G +GV+ + K TGE+ A K I D+ L + R EI+
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR----EIK 61
Query: 94 IMTRLSGHPNVVDLKAV-----YEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLF 148
I+ H N++ + + +E+ + V+++ EL HR+ S+ +
Sbjct: 62 ILKHFK-HENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFI 118
Query: 149 MQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYI--------EP-GQ 199
Q ++ V H V+HRDLKP N+L+ S+ +K+ DFGLA I EP GQ
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 200 S--LLGTVGSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSR----I 251
++ V + +Y APEV+ + Y++A DVWS G IL L P F G I
Sbjct: 176 QSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLI 235
Query: 252 FDAVRTA----DLR----------------FPSNPWD----HISDSAKDLVMGMLSTDPS 287
F + T DLR +P+ P + ++ DL+ ML DP+
Sbjct: 236 FGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPA 295
Query: 288 QRLTARQVLDHSWM 301
+R+TA++ L+H ++
Sbjct: 296 KRITAKEALEHPYL 309
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 141/300 (47%), Gaps = 55/300 (18%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
+G G FGV+ +GE+ A K + + + E++IM +L H N+V L+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-------NRELQIMRKLD-HCNIVRLR 79
Query: 109 AVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAE-------ARVLFMQLMQVV 155
+ +DE Y++LV++ E +R+ + +S A+ ++ QL + +
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVAR--HYSRAKQTLPVIYVKLYMYQLFRSL 135
Query: 156 LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEV 215
Y H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + + S +Y APE+
Sbjct: 136 AYIHSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPEL 193
Query: 216 LAGG--YNQAADVWSAGVILYILLSGMPPFWGN----------------TKSRIFDA-VR 256
+ G Y + DVWSAG +L LL G P F G+ T+ +I +
Sbjct: 194 IFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPN 253
Query: 257 TADLRFP---SNPWDHI-----SDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
+ FP ++PW + A L +L P+ RLT + HS+ D ++DP
Sbjct: 254 YTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF-DELRDP 312
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 145/314 (46%), Gaps = 58/314 (18%)
Query: 36 ISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAK-DR-LVTIDDERSVKLEIE 93
+ N+ F L LG G +GV+ + K TGE+ A K I D+ L + R EI+
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR----EIK 61
Query: 94 IMTRLSGHPNVVDLKAV-----YEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLF 148
I+ H N++ + + +E+ + V+++ EL HR+ S+ +
Sbjct: 62 ILKHFK-HENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFI 118
Query: 149 MQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYI--------EP-GQ 199
Q ++ V H V+HRDLKP N+L+ S+ +K+ DFGLA I EP GQ
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 200 S--LLGTVGSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSR----I 251
+ V + +Y APEV+ + Y++A DVWS G IL L P F G I
Sbjct: 176 QSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLI 235
Query: 252 FDAVRTA----DLR----------------FPSNPWD----HISDSAKDLVMGMLSTDPS 287
F + T DLR +P+ P + ++ DL+ ML DP+
Sbjct: 236 FGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPA 295
Query: 288 QRLTARQVLDHSWM 301
+R+TA++ L+H ++
Sbjct: 296 KRITAKEALEHPYL 309
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 126/263 (47%), Gaps = 21/263 (7%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDL- 107
+G G +G + K G++ K + + + + V E+ ++ L HPN+V
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVS-EVNLLRELK-HPNIVRYY 71
Query: 108 -KAVYEDEDYVHLVMELCAGGELFHRLEKFGR----FSEAEARVLFMQLMQVVLYCHEIG 162
+ + +++VME C GG+L + K + E + QL + CH
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 163 -----VVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT-VGSPFYIAPEVL 216
V+HRDLKP N+ L K + +KL DFGLA + + VG+P+Y++PE +
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQN---VKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQM 188
Query: 217 AG-GYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
YN+ +D+WS G +LY L + MPPF ++ + +R +F P+ + SD
Sbjct: 189 NRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREG--KFRRIPYRY-SDELN 245
Query: 276 DLVMGMLSTDPSQRLTARQVLDH 298
+++ ML+ R + ++L++
Sbjct: 246 EIITRMLNLKDYHRPSVEEILEN 268
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 145/314 (46%), Gaps = 58/314 (18%)
Query: 36 ISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAK-DR-LVTIDDERSVKLEIE 93
+ N+ F L LG G +GV+ + K TGE+ A K I D+ L + R EI+
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR----EIK 61
Query: 94 IMTRLSGHPNVVDLKAV-----YEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLF 148
I+ H N++ + + +E+ + V+++ EL HR+ S+ +
Sbjct: 62 ILKHFK-HENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFI 118
Query: 149 MQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYI--------EP-GQ 199
Q ++ V H V+HRDLKP N+L+ S+ +K+ DFGLA I EP GQ
Sbjct: 119 YQTLRAVKVLHGSNVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTGQ 175
Query: 200 S--LLGTVGSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSR----I 251
+ V + +Y APEV+ + Y++A DVWS G IL L P F G I
Sbjct: 176 QSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLI 235
Query: 252 FDAVRTA----DLR----------------FPSNPWD----HISDSAKDLVMGMLSTDPS 287
F + T DLR +P+ P + ++ DL+ ML DP+
Sbjct: 236 FGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPA 295
Query: 288 QRLTARQVLDHSWM 301
+R+TA++ L+H ++
Sbjct: 296 KRITAKEALEHPYL 309
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 118/262 (45%), Gaps = 19/262 (7%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+++G G FG + D EV A K ++ + + + + E+ + +L HPN +
Sbjct: 60 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQ 118
Query: 107 LKAVYEDEDYVHLVMELCAGG--ELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVV 164
+ Y E LVME C G +L +K E E + +Q + Y H ++
Sbjct: 119 YRGCYLREHTAWLVMEYCLGSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSHNMI 176
Query: 165 HRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVL----AGGY 220
HRD+K NILL+ +KL DFG A+ + P +GT P+++APEV+ G Y
Sbjct: 177 HRDVKAGNILLSEPGL---VKLGDFGSASIMAPANXFVGT---PYWMAPEVILAMDEGQY 230
Query: 221 NQAADVWSAGVILYILLSGMPPFWG-NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+ DVWS G+ L PP + N S ++ + S W S+ ++ V
Sbjct: 231 DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEYFRNFVD 287
Query: 280 GMLSTDPSQRLTARQVLDHSWM 301
L P R T+ +L H ++
Sbjct: 288 SCLQKIPQDRPTSEVLLKHRFV 309
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 131/265 (49%), Gaps = 22/265 (8%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDL 107
+LG G FG + +K TG + A K I ++D +EIEI+ HP +V L
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELED---YIVEIEILAT-CDHPYIVKL 81
Query: 108 KAVYEDEDYVHLVMELCAGGELFHRLEKFGR-FSEAEARVLFMQLMQVVLYCHEIGVVHR 166
Y + + +++E C GG + + + R +E + +V+ Q+++ + + H ++HR
Sbjct: 82 LGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHR 141
Query: 167 DLKPENILLATKASSSPIKLADFGL-ATYIEPGQSLLGTVGSPFYIAPEVLA------GG 219
DLK N+L+ + I+LADFG+ A ++ Q +G+P+++APEV+
Sbjct: 142 DLKAGNVLMTLEGD---IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 198
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTAD---LRFPSNPWDHISDSAKD 276
Y+ AD+WS G+ L + PP R+ + +D L PS W S +D
Sbjct: 199 YDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSK-W---SVEFRD 254
Query: 277 LVMGMLSTDPSQRLTARQVLDHSWM 301
+ L +P R +A Q+L+H ++
Sbjct: 255 FLKIALDKNPETRPSAAQLLEHPFV 279
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 131/265 (49%), Gaps = 22/265 (8%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDL 107
+LG G FG + +K TG + A K I ++D +EIEI+ HP +V L
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELED---YIVEIEILAT-CDHPYIVKL 73
Query: 108 KAVYEDEDYVHLVMELCAGGELFHRLEKFGR-FSEAEARVLFMQLMQVVLYCHEIGVVHR 166
Y + + +++E C GG + + + R +E + +V+ Q+++ + + H ++HR
Sbjct: 74 LGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHR 133
Query: 167 DLKPENILLATKASSSPIKLADFGL-ATYIEPGQSLLGTVGSPFYIAPEVLA------GG 219
DLK N+L+ + I+LADFG+ A ++ Q +G+P+++APEV+
Sbjct: 134 DLKAGNVLMTLEGD---IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTP 190
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTAD---LRFPSNPWDHISDSAKD 276
Y+ AD+WS G+ L + PP R+ + +D L PS W S +D
Sbjct: 191 YDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSK-W---SVEFRD 246
Query: 277 LVMGMLSTDPSQRLTARQVLDHSWM 301
+ L +P R +A Q+L+H ++
Sbjct: 247 FLKIALDKNPETRPSAAQLLEHPFV 271
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 137/298 (45%), Gaps = 49/298 (16%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
+G G FGV+ +GE+ A K + + + E++IM +L H N+V L+
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFK-------NRELQIMRKLD-HCNIVRLR 79
Query: 109 AVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEA----EARVLFMQLMQVVLYC 158
+ +DE Y++LV++ ++ + R + ++ QL + + Y
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPA-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 159 HEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAG 218
H G+ HRD+KP+N+LL ++ +KL DFG A + G+ + + S +Y APE++ G
Sbjct: 139 HSFGICHRDIKPQNLLL--DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 219 G--YNQAADVWSAGVILYILLSGMPPFWGN----------------TKSRIFDA-VRTAD 259
Y + DVWSAG +L LL G P F G+ T+ +I + +
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTE 256
Query: 260 LRFP---SNPWDHI-----SDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPE 309
FP ++PW + A L +L P+ RLT + HS+ D ++DP
Sbjct: 257 FAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF-DELRDPN 313
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 137/292 (46%), Gaps = 29/292 (9%)
Query: 31 LDTNQISNLRER---FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERS 87
LD +S LR+ F L + +G G +G + TG++ A K + VT D+E
Sbjct: 11 LDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD----VTGDEEEE 66
Query: 88 VKLEIEIMTRLSGHPNVVDLKAVYED------EDYVHLVMELCAGGELFHRLEKFGRFSE 141
+K EI ++ + S H N+ + +D + LVME C G + ++ +
Sbjct: 67 IKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTL 126
Query: 142 AEARVLFM--QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQ 199
E + ++ ++++ + + H+ V+HRD+K +N+LL A +KL DFG++ ++
Sbjct: 127 KEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAE---VKLVDFGVSAQLDRTV 183
Query: 200 SLLGT-VGSPFYIAPEVLA------GGYNQAADVWSAGVILYILLSGMPPFWGNTKSR-I 251
T +G+P+++APEV+A Y+ +D+WS G+ + G PP R +
Sbjct: 184 GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL 243
Query: 252 FDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
F R R S W S + + L + SQR Q++ H ++ D
Sbjct: 244 FLIPRNPAPRLKSKKW---SKKFQSFIESCLVKNHSQRPATEQLMKHPFIRD 292
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 118/262 (45%), Gaps = 19/262 (7%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+++G G FG + D EV A K ++ + + + + E+ + +L HPN +
Sbjct: 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQ 79
Query: 107 LKAVYEDEDYVHLVMELCAGG--ELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVV 164
+ Y E LVME C G +L +K E E + +Q + Y H ++
Sbjct: 80 YRGCYLREHTAWLVMEYCLGSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSHNMI 137
Query: 165 HRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVL----AGGY 220
HRD+K NILL+ +KL DFG A+ + P +GT P+++APEV+ G Y
Sbjct: 138 HRDVKAGNILLSEPGL---VKLGDFGSASIMAPANXFVGT---PYWMAPEVILAMDEGQY 191
Query: 221 NQAADVWSAGVILYILLSGMPPFWG-NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+ DVWS G+ L PP + N S ++ + S W S+ ++ V
Sbjct: 192 DGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEYFRNFVD 248
Query: 280 GMLSTDPSQRLTARQVLDHSWM 301
L P R T+ +L H ++
Sbjct: 249 SCLQKIPQDRPTSEVLLKHRFV 270
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 130/286 (45%), Gaps = 33/286 (11%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSI--AKDRLVTIDDERSV--KLEIEIMTRLSG---- 100
LG G FG + + +A K I +++L TI E + L + + R
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRL--EKFGRFSEAEARVLFMQLMQVVLYC 158
N V + + + + ME C G L+ + E + + R LF Q+++ + Y
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR-LFRQILEALSYI 132
Query: 159 HEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIE-------------PGQS--LLG 203
H G++HRDLKP NI + S +K+ DFGLA + PG S L
Sbjct: 133 HSQGIIHRDLKPMNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 204 TVGSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLR 261
+G+ Y+A EVL G YN+ D++S G+I + ++ P G + I +R+ +
Sbjct: 190 AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI--YPFSTGMERVNILKKLRSVSIE 247
Query: 262 FPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQD 307
FP + D+ K ++ ++ DP++R AR +L+ W+ QD
Sbjct: 248 FPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQD 293
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 130/268 (48%), Gaps = 24/268 (8%)
Query: 39 LRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSI---AKDRLVTIDDERSVKLEIEIM 95
+ ER+ + +LG G + + D A K+I +++ T+ + + E+
Sbjct: 9 INERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETL---KRFEREVHNS 65
Query: 96 TRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVV 155
++LS H N+V + V E++D +LVME G L +E G S A Q++ +
Sbjct: 66 SQLS-HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGI 124
Query: 156 LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-----TYIEPGQSLLGTVGSPFY 210
+ H++ +VHRD+KP+NIL+ S+ +K+ DFG+A T + +LGTV Y
Sbjct: 125 KHAHDMRIVHRDIKPQNILI---DSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQ---Y 178
Query: 211 IAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWD- 268
+PE G ++ D++S G++LY +L G PPF G T I A++ P+ D
Sbjct: 179 FSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI--AIKHIQDSVPNVTTDV 236
Query: 269 --HISDSAKDLVMGMLSTDPSQRLTARQ 294
I S ++++ D + R Q
Sbjct: 237 RKDIPQSLSNVILRATEKDKANRYKTIQ 264
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 125/262 (47%), Gaps = 16/262 (6%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDL 107
+LG G FG + +K T + A K I ++D +EI+I+ HPN+V L
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELED---YMVEIDILAS-CDHPNIVKL 99
Query: 108 KAVYEDEDYVHLVMELCAGGELFHRLEKFGR-FSEAEARVLFMQLMQVVLYCHEIGVVHR 166
+ E+ + +++E CAGG + + + R +E++ +V+ Q + + Y H+ ++HR
Sbjct: 100 LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHR 159
Query: 167 DLKPENILLATKASSSPIKLADFGL-ATYIEPGQSLLGTVGSPFYIAPEVLA------GG 219
DLK NIL IKLADFG+ A Q +G+P+++APEV+
Sbjct: 160 DLKAGNILFTLDGD---IKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
Y+ ADVWS G+ L + PP R+ + ++ + P S + KD +
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFKDFLK 275
Query: 280 GMLSTDPSQRLTARQVLDHSWM 301
L + R T Q+L H ++
Sbjct: 276 KCLEKNVDARWTTSQLLQHPFV 297
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 125/262 (47%), Gaps = 16/262 (6%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDL 107
+LG G FG + +K T + A K I ++D +EI+I+ HPN+V L
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELED---YMVEIDILAS-CDHPNIVKL 99
Query: 108 KAVYEDEDYVHLVMELCAGGELFHRLEKFGR-FSEAEARVLFMQLMQVVLYCHEIGVVHR 166
+ E+ + +++E CAGG + + + R +E++ +V+ Q + + Y H+ ++HR
Sbjct: 100 LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHR 159
Query: 167 DLKPENILLATKASSSPIKLADFGL-ATYIEPGQSLLGTVGSPFYIAPEVLA------GG 219
DLK NIL IKLADFG+ A Q +G+P+++APEV+
Sbjct: 160 DLKAGNILFTLDGD---IKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRP 216
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
Y+ ADVWS G+ L + PP R+ + ++ + P S + KD +
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFKDFLK 275
Query: 280 GMLSTDPSQRLTARQVLDHSWM 301
L + R T Q+L H ++
Sbjct: 276 KCLEKNVDARWTTSQLLQHPFV 297
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 133/304 (43%), Gaps = 62/304 (20%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDER----SVKLEIEIMTRLSGHP 102
++LG G + + +K TG A K V +D E + EI +M L H
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKE------VKLDSEEGTPSTAIREISLMKELK-HE 63
Query: 103 NVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF--GRFSEAEARVLFM--------QLM 152
N+V L V E+ + LV E L+K+ R R L + QL+
Sbjct: 64 NIVRLYDVIHTENKLTLVFEFMDND-----LKKYMDSRTVGNTPRGLELNLVKYFQWQLL 118
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYI 211
Q + +CHE ++HRDLKP+N+L+ + +KL DFGLA + P + V + +Y
Sbjct: 119 QGLAFCHENKILHRDLKPQNLLINKRGQ---LKLGDFGLARAFGIPVNTFSSEVVTLWYR 175
Query: 212 APEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGNTKSR----IFDAVRTA------- 258
AP+VL G Y+ + D+WS G IL +++G P F G IFD + T
Sbjct: 176 APDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPS 235
Query: 259 -----------------DLRFPSNPW--DHISDSAKDLVMGMLSTDPSQRLTARQVLDHS 299
DLR P + + + D + G+L +P RL+A+Q L H
Sbjct: 236 VTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHP 295
Query: 300 WMGD 303
W +
Sbjct: 296 WFAE 299
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 125/264 (47%), Gaps = 12/264 (4%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
E F +++G G FG + D T +V A K I D D+ ++ EI ++++
Sbjct: 26 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVLSQCD 83
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCH 159
P V Y + + ++ME GG LE G E + + ++++ + Y H
Sbjct: 84 S-PYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLH 141
Query: 160 EIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT-VGSPFYIAPEVLA- 217
+HRD+K N+LL+ +KLADFG+A + Q T VG+PF++APEV+
Sbjct: 142 SEKKIHRDIKAANVLLSEHGE---VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQ 198
Query: 218 GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDL 277
Y+ AD+WS G+ L G PP ++ + + P + S K+
Sbjct: 199 SAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN---PPTLEGNYSKPLKEF 255
Query: 278 VMGMLSTDPSQRLTARQVLDHSWM 301
V L+ +PS R TA+++L H ++
Sbjct: 256 VEACLNKEPSFRPTAKELLKHKFI 279
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 125/262 (47%), Gaps = 16/262 (6%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDL 107
+LG G FG + +K T + A K I ++D +EI+I+ HPN+V L
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELED---YMVEIDILAS-CDHPNIVKL 99
Query: 108 KAVYEDEDYVHLVMELCAGGELFHRLEKFGR-FSEAEARVLFMQLMQVVLYCHEIGVVHR 166
+ E+ + +++E CAGG + + + R +E++ +V+ Q + + Y H+ ++HR
Sbjct: 100 LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHR 159
Query: 167 DLKPENILLATKASSSPIKLADFGL-ATYIEPGQSLLGTVGSPFYIAPEVLA------GG 219
DLK NIL IKLADFG+ A Q +G+P+++APEV+
Sbjct: 160 DLKAGNILFTLDGD---IKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRP 216
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
Y+ ADVWS G+ L + PP R+ + ++ + P S + KD +
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFKDFLK 275
Query: 280 GMLSTDPSQRLTARQVLDHSWM 301
L + R T Q+L H ++
Sbjct: 276 KCLEKNVDARWTTSQLLQHPFV 297
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 125/263 (47%), Gaps = 12/263 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G FG + D T +V A K I D D+ ++ EI ++++
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVLSQCDS 64
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
P V Y + + ++ME GG LE G E + + ++++ + Y H
Sbjct: 65 -PYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHS 122
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT-VGSPFYIAPEVLA-G 218
+HRD+K N+LL+ +KLADFG+A + Q T VG+PF++APEV+
Sbjct: 123 EKKIHRDIKAANVLLSEHGE---VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQS 179
Query: 219 GYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLV 278
Y+ AD+WS G+ L G PP ++ + + P + S K+ V
Sbjct: 180 AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN---PPTLEGNYSKPLKEFV 236
Query: 279 MGMLSTDPSQRLTARQVLDHSWM 301
L+ +PS R TA+++L H ++
Sbjct: 237 EACLNKEPSFRPTAKELLKHKFI 259
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 135/294 (45%), Gaps = 50/294 (17%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDE---RSVKLEIEIMTRLSGHPN 103
+++G G +G + ++ T E+ A K + D DDE S EI ++ L H N
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDD----DDEGVPSSALREICLLKELK-HKN 62
Query: 104 VVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-----GRFSEAEARVLFMQLMQVVLYC 158
+V L V + + LV E C L+K+ G + QL++ + +C
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCD-----QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 159 HEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYIAPEVLA 217
H V+HRDLKP+N+L+ +KLA+FGLA + P + V + +Y P+VL
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGE---LKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLF 174
Query: 218 GG--YNQAADVWSAGVILYILL-SGMPPFWGN----TKSRIFDAVRT-ADLRFPS----- 264
G Y+ + D+WSAG I L +G P F GN RIF + T + ++PS
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234
Query: 265 ---------------NPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
N ++ + +DL+ +L +P QR++A + L H + D
Sbjct: 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 134/294 (45%), Gaps = 50/294 (17%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDE---RSVKLEIEIMTRLSGHPN 103
+++G G +G + ++ T E+ A K + D DDE S EI ++ L H N
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDD----DDEGVPSSALREICLLKELK-HKN 62
Query: 104 VVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-----GRFSEAEARVLFMQLMQVVLYC 158
+V L V + + LV E C L+K+ G + QL++ + +C
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCD-----QDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFC 117
Query: 159 HEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLLGTVGSPFYIAPEVLA 217
H V+HRDLKP+N+L+ +KLADFGLA + P + V + +Y P+VL
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGE---LKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLF 174
Query: 218 GG--YNQAADVWSAGVILYILLSGMPP-FWGN----TKSRIFDAVRT-ADLRFPS----- 264
G Y+ + D+WSAG I L + P F GN RIF + T + ++PS
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234
Query: 265 ---------------NPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
N ++ + +DL+ +L +P QR++A + L H + D
Sbjct: 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 129/286 (45%), Gaps = 33/286 (11%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSI--AKDRLVTIDDERSV--KLEIEIMTRLSG---- 100
LG G FG + + +A K I +++L TI E + L + + R
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLE 73
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRL--EKFGRFSEAEARVLFMQLMQVVLYC 158
N V + + + + ME C L+ + E + + R LF Q+++ + Y
Sbjct: 74 RRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWR-LFRQILEALSYI 132
Query: 159 HEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIE-------------PGQS--LLG 203
H G++HRDLKP NI + S +K+ DFGLA + PG S L
Sbjct: 133 HSQGIIHRDLKPMNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 204 TVGSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLR 261
+G+ Y+A EVL G YN+ D++S G+I + ++ P G + I +R+ +
Sbjct: 190 AIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI--YPFSTGMERVNILKKLRSVSIE 247
Query: 262 FPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQD 307
FP + D+ K ++ ++ DP++R AR +L+ W+ QD
Sbjct: 248 FPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQD 293
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 127/270 (47%), Gaps = 12/270 (4%)
Query: 34 NQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIE 93
N ++ E F +++G G FG + D T +V A K I D D+ ++ EI
Sbjct: 15 NLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEIT 72
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQ 153
++++ P V Y + + ++ME GG LE G E + + ++++
Sbjct: 73 VLSQCDS-PYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILK 130
Query: 154 VVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT-VGSPFYIA 212
+ Y H +HRD+K N+LL+ +KLADFG+A + Q VG+PF++A
Sbjct: 131 GLDYLHSEKKIHRDIKAANVLLSEHGE---VKLADFGVAGQLTDTQIKRNXFVGTPFWMA 187
Query: 213 PEVLA-GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHIS 271
PEV+ Y+ AD+WS G+ L G PP ++ + + P + S
Sbjct: 188 PEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN---PPTLEGNYS 244
Query: 272 DSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
K+ V L+ +PS R TA+++L H ++
Sbjct: 245 KPLKEFVEACLNKEPSFRPTAKELLKHKFI 274
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 127/257 (49%), Gaps = 26/257 (10%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
+G G FGV VC K+ + A K I + + ++ +E+ ++R++ HPN+V L
Sbjct: 17 VGRGAFGV--VCKAKWRAKDVAIKQIESE-----SERKAFIVELRQLSRVN-HPNIVKLY 68
Query: 109 AVYEDEDYVHLVMELCAGGELF---HRLEKFGRFSEAEARVLFMQLMQVVLYCHEI---G 162
+ V LVME GG L+ H E ++ A A +Q Q V Y H +
Sbjct: 69 GACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 126
Query: 163 VVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAG-GYN 221
++HRDLKP N+LL A + +K+ DFG A I+ + GS ++APEV G Y+
Sbjct: 127 LIHRDLKPPNLLLV--AGGTVLKICDFGTACDIQ--THMTNNKGSAAWMAPEVFEGSNYS 182
Query: 222 QAADVWSAGVILYILLSGMPPF--WGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+ DV+S G+IL+ +++ PF G RI AV R P ++ + L+
Sbjct: 183 EKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGT-RPPLI--KNLPKPIESLMT 239
Query: 280 GMLSTDPSQRLTARQVL 296
S DPSQR + +++
Sbjct: 240 RCWSKDPSQRPSMEEIV 256
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 125/262 (47%), Gaps = 23/262 (8%)
Query: 52 GQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVY 111
G FG + +K T + A K I ++D +EI+I+ HPN+V L +
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELED---YMVEIDILAS-CDHPNIVKLLDAF 76
Query: 112 EDEDYVHLVMELCAGGELFHRLEKFGR-FSEAEARVLFMQLMQVVLYCHEIGVVHRDLKP 170
E+ + +++E CAGG + + + R +E++ +V+ Q + + Y H+ ++HRDLK
Sbjct: 77 YYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKA 136
Query: 171 ENILLATKASSSPIKLADFGLA-----TYIEPGQSLLGTVGSPFYIAPEVLA------GG 219
NIL IKLADFG++ T I+ S +GT P+++APEV+
Sbjct: 137 GNILFTLDGD---IKLADFGVSAKNTRTXIQRRDSFIGT---PYWMAPEVVMCETSKDRP 190
Query: 220 YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
Y+ ADVWS G+ L + PP R+ + ++ + P S + KD +
Sbjct: 191 YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFKDFLK 249
Query: 280 GMLSTDPSQRLTARQVLDHSWM 301
L + R T Q+L H ++
Sbjct: 250 KCLEKNVDARWTTSQLLQHPFV 271
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 127/257 (49%), Gaps = 26/257 (10%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
+G G FGV VC K+ + A K I + + ++ +E+ ++R++ HPN+V L
Sbjct: 16 VGRGAFGV--VCKAKWRAKDVAIKQIESE-----SERKAFIVELRQLSRVN-HPNIVKLY 67
Query: 109 AVYEDEDYVHLVMELCAGGELF---HRLEKFGRFSEAEARVLFMQLMQVVLYCHEI---G 162
+ V LVME GG L+ H E ++ A A +Q Q V Y H +
Sbjct: 68 GACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKA 125
Query: 163 VVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAG-GYN 221
++HRDLKP N+LL A + +K+ DFG A I+ + GS ++APEV G Y+
Sbjct: 126 LIHRDLKPPNLLLV--AGGTVLKICDFGTACDIQ--THMTNNKGSAAWMAPEVFEGSNYS 181
Query: 222 QAADVWSAGVILYILLSGMPPF--WGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVM 279
+ DV+S G+IL+ +++ PF G RI AV R P ++ + L+
Sbjct: 182 EKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGT-RPPLI--KNLPKPIESLMT 238
Query: 280 GMLSTDPSQRLTARQVL 296
S DPSQR + +++
Sbjct: 239 RCWSKDPSQRPSMEEIV 255
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 124/263 (47%), Gaps = 12/263 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
E F +++G G FG + D T +V A K I D D+ ++ EI ++++
Sbjct: 7 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKII--DLEEAEDEIEDIQQEITVLSQCDS 64
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
P V Y + + ++ME GG LE G E + + ++++ + Y H
Sbjct: 65 -PYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHS 122
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT-VGSPFYIAPEVLA-G 218
+HRD+K N+LL+ +KLADFG+A + Q VG+PF++APEV+
Sbjct: 123 EKKIHRDIKAANVLLSEHGE---VKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQS 179
Query: 219 GYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLV 278
Y+ AD+WS G+ L G PP ++ + + P + S K+ V
Sbjct: 180 AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN---PPTLEGNYSKPLKEFV 236
Query: 279 MGMLSTDPSQRLTARQVLDHSWM 301
L+ +PS R TA+++L H ++
Sbjct: 237 EACLNKEPSFRPTAKELLKHKFI 259
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 131/296 (44%), Gaps = 45/296 (15%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
+G G +G + D + A K +++ I R+ + E+ ++ L H NV+ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR-ELRLLKHLK-HENVIGLL 93
Query: 109 AVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIG 162
V+ ED V+LV L G + + K S+ + L QL++ + Y H G
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLM--GADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAG 151
Query: 163 VVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAG--GY 220
++HRDLKP N+ + S +++ DFGLA + + + G V + +Y APE++ Y
Sbjct: 152 IIHRDLKPSNVAV---NEDSELRILDFGLAR--QADEEMTGYVATRWYRAPEIMLNWMHY 206
Query: 221 NQAADVWSAGVILYILLSGMPPFWG----NTKSRIFDAV----------------RTADL 260
NQ D+WS G I+ LL G F G + RI + V RT
Sbjct: 207 NQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ 266
Query: 261 RFPSNPWDHISDS-------AKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPE 309
P P +S A DL+ ML D QR++A + L H++ DPE
Sbjct: 267 SLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ-YHDPE 321
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 131/296 (44%), Gaps = 45/296 (15%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
+G G +G + D + A K +++ I R+ + E+ ++ L H NV+ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR-ELRLLKHLK-HENVIGLL 93
Query: 109 AVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIG 162
V+ ED V+LV L G + + K S+ + L QL++ + Y H G
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG 151
Query: 163 VVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAG--GY 220
++HRDLKP N+ + S +++ DFGLA + + + G V + +Y APE++ Y
Sbjct: 152 IIHRDLKPSNVAV---NEDSELRILDFGLAR--QADEEMTGYVATRWYRAPEIMLNWMHY 206
Query: 221 NQAADVWSAGVILYILLSGMPPFWG----NTKSRIFDAV----------------RTADL 260
NQ D+WS G I+ LL G F G + RI + V RT
Sbjct: 207 NQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ 266
Query: 261 RFPSNPWDHISD-------SAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPE 309
P P +S A DL+ ML D QR++A + L H++ DPE
Sbjct: 267 SLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ-YHDPE 321
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 130/297 (43%), Gaps = 51/297 (17%)
Query: 51 WGQ---FGVIRVCSDKFTGEVFACKSIAKDRLVTID-----DERSVKLEIEIMTRLSGHP 102
WG + ++R EVF +I + V + + +K EI+I+ L G P
Sbjct: 33 WGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIKILENLRGGP 92
Query: 103 NVVDLKAVYED--EDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
N++ L + +D LV E + F +L + ++ + R ++++ + YCH
Sbjct: 93 NIITLADIVKDPVSRTPALVFEHVNNTD-FKQL--YQTLTDYDIRFYMYEILKALDYCHS 149
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG- 219
+G++HRD+KP N+++ + ++L D+GLA + PGQ V S ++ PE+L
Sbjct: 150 MGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ 207
Query: 220 -YNQAADVWSAGVILYILLSGMPPFWGNTKS-----RIFDAVRTADL------------- 260
Y+ + D+WS G +L ++ PF+ + RI + T DL
Sbjct: 208 MYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDP 267
Query: 261 -------RFPSNPWDH---------ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
R W+ +S A D + +L D RLTAR+ ++H +
Sbjct: 268 RFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 145/317 (45%), Gaps = 51/317 (16%)
Query: 32 DTNQIS-NLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKL 90
D N+ + L + +V +G G +G + DK +GE A K +++ I +R+ +
Sbjct: 14 DVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR- 72
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYV------HLVMELCAGGELFHRLEKFG--RFSEA 142
E+ ++ + H NV+ L V+ + +LVM L+K +FSE
Sbjct: 73 ELLLLKHMQ-HENVIGLLDVFTPASSLRNFYDFYLVMPFMQTD-----LQKIMGLKFSEE 126
Query: 143 EARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLL 202
+ + L Q+++ + Y H GVVHRDLKP N+ + +K+ DFGLA + + +
Sbjct: 127 KIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV---NEDCELKILDFGLARHADA--EMT 181
Query: 203 GTVGSPFYIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWG----NTKSRIF---- 252
G V + +Y APEV+ YNQ D+WS G I+ +L+G F G + ++I
Sbjct: 182 GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTG 241
Query: 253 ------------DAVRTADLRFPSNP-------WDHISDSAKDLVMGMLSTDPSQRLTAR 293
A ++ P P + S A DL+ ML D +RLTA
Sbjct: 242 VPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAA 301
Query: 294 QVLDHSWMGDGIQDPEK 310
Q L H + + +DPE+
Sbjct: 302 QALTHPFF-EPFRDPEE 317
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 138/305 (45%), Gaps = 46/305 (15%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
Q+ ++ R+ +G G +G++ D A K I+ T +R+++ EI+I
Sbjct: 37 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYC-QRTLR-EIKI 94
Query: 95 MTRLSGHPNVVDLKAVY-----EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM 149
+ R H N++ + + E V+LV L G +L+ +L K S
Sbjct: 95 LLRFR-HENIIGINDIIRAPTIEQMKDVYLVTHL-MGADLY-KLLKTQHLSNDHICYFLY 151
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLG----TV 205
Q+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA +P G V
Sbjct: 152 QILRGLKYIHSANVLHRDLKPSNLLLNT---TXDLKICDFGLARVADPDHDHTGFLTEYV 208
Query: 206 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAV-------- 255
+ +Y APE++ + GY ++ D+WS G IL +LS P F G + +
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 268
Query: 256 ------------RTADLRFPSN---PWDHI---SDS-AKDLVMGMLSTDPSQRLTARQVL 296
R L P PW+ + +DS A DL+ ML+ +P +R+ Q L
Sbjct: 269 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 328
Query: 297 DHSWM 301
H ++
Sbjct: 329 AHPYL 333
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 129/289 (44%), Gaps = 49/289 (16%)
Query: 39 LRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDE--RSVKLEIEIMT 96
LR R VL + G F + D +G +A K RL++ ++E R++ E+ M
Sbjct: 30 LRVRRVLAE----GGFAFVYEAQDVGSGREYALK-----RLLSNEEEKNRAIIQEVCFMK 80
Query: 97 RLSGHPNVVDLKAV----YEDEDYVH----LVMELCAGG--ELFHRLEKFGRFSEAEARV 146
+LSGHPN+V + E+ D L+ ELC G E ++E G S
Sbjct: 81 KLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLK 140
Query: 147 LFMQLMQVVLYCHEIG--VVHRDLKPENILLATKASSSPIKLADFGLATYIE--PGQSL- 201
+F Q + V + H ++HRDLK EN+LL+ + + IKL DFG AT I P S
Sbjct: 141 IFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGT---IKLCDFGSATTISHYPDYSWS 197
Query: 202 ----------LGTVGSPFYIAPEVLAGGYN----QAADVWSAGVILYILLSGMPPFWGNT 247
+ +P Y PE++ N + D+W+ G ILY+L PF
Sbjct: 198 AQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGA 257
Query: 248 KSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVL 296
K RI + ++ P D L+ ML +P +RL+ +V+
Sbjct: 258 KLRIVNG------KYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVV 300
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 127/287 (44%), Gaps = 35/287 (12%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSI--AKDRLVTIDDERSV--KLEIEIMTRLSG---- 100
LG G FG + + +A K I +++L TI E + L + + R
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWLE 73
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRL--EKFGRFSEAEARVLFMQLMQVVLYC 158
N V + + + + E C L+ + E + + R LF Q+++ + Y
Sbjct: 74 RRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWR-LFRQILEALSYI 132
Query: 159 HEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIE-------------PGQS--LLG 203
H G++HR+LKP NI + S +K+ DFGLA + PG S L
Sbjct: 133 HSQGIIHRNLKPXNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTS 189
Query: 204 TVGSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPF-WGNTKSRIFDAVRTADL 260
+G+ Y+A EVL G YN+ D +S G+I + + PF G + I +R+ +
Sbjct: 190 AIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFF---EXIYPFSTGXERVNILKKLRSVSI 246
Query: 261 RFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQD 307
FP + D+ K ++ ++ DP++R AR +L+ W+ QD
Sbjct: 247 EFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQD 293
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
+G G +G + D + A K +++ I R+ + E+ ++ L H NV+ L
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR-ELRLLKHLK-HENVIGLL 85
Query: 109 AVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIG 162
V+ ED V+LV L G + + K S+ + L QL++ + Y H G
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAG 143
Query: 163 VVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAG--GY 220
++HRDLKP N+ + +++ DFGLA + + + G V + +Y APE++ Y
Sbjct: 144 IIHRDLKPSNVAVNEDCE---LRILDFGLAR--QADEEMTGYVATRWYRAPEIMLNWMHY 198
Query: 221 NQAADVWSAGVILYILLSGMPPFWG----NTKSRIFDAV----------------RTADL 260
NQ D+WS G I+ LL G F G + RI + V RT
Sbjct: 199 NQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTYIQ 258
Query: 261 RFPSNPWDHISDS-------AKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPE 309
P P +S A DL+ ML D QR++A + L H++ DPE
Sbjct: 259 SLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQ-YHDPE 313
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 144/317 (45%), Gaps = 51/317 (16%)
Query: 32 DTNQIS-NLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKL 90
D N+ + L + +V +G G +G + DK +GE A K +++ I +R+ +
Sbjct: 32 DVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR- 90
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYV------HLVMELCAGGELFHRLEKFG--RFSEA 142
E+ ++ + H NV+ L V+ + +LVM L+K FSE
Sbjct: 91 ELLLLKHMQ-HENVIGLLDVFTPASSLRNFYDFYLVMPFMQTD-----LQKIMGMEFSEE 144
Query: 143 EARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLL 202
+ + L Q+++ + Y H GVVHRDLKP N+ + +K+ DFGLA + + +
Sbjct: 145 KIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCE---LKILDFGLARHADA--EMT 199
Query: 203 GTVGSPFYIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWG----NTKSRIF---- 252
G V + +Y APEV+ YNQ D+WS G I+ +L+G F G + ++I
Sbjct: 200 GYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTG 259
Query: 253 ------------DAVRTADLRFPSNP-------WDHISDSAKDLVMGMLSTDPSQRLTAR 293
A ++ P P + S A DL+ ML D +RLTA
Sbjct: 260 VPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAA 319
Query: 294 QVLDHSWMGDGIQDPEK 310
Q L H + + +DPE+
Sbjct: 320 QALTHPFF-EPFRDPEE 335
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 136/305 (44%), Gaps = 46/305 (15%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
Q+ ++ R+ +G G +G++ D A K I+ T +R+++ EI+I
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYX-QRTLR-EIKI 78
Query: 95 MTRLSGHPNVVDLKAVY-----EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM 149
+ R H N++ + + E V++V +L ++L K S
Sbjct: 79 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 135
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLG----TV 205
Q+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA +P G V
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNT---TXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 206 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAV-------- 255
+ +Y APE++ + GY ++ D+WS G IL +LS P F G + +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 256 ------------RTADLRFPSN---PWDHI---SDS-AKDLVMGMLSTDPSQRLTARQVL 296
R L P PW+ + +DS A DL+ ML+ +P +R+ Q L
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 297 DHSWM 301
H ++
Sbjct: 313 AHPYL 317
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 138/298 (46%), Gaps = 44/298 (14%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKL--EIEIMTRLSG--HPN 103
++G G +G + D +G A KS+ R+ ++ + E+ ++ RL HPN
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSV---RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 104 VVDLKAV-----YEDEDYVHLVMELCAGGELFHRLEKF---GRFSEAEARVLFMQLMQVV 155
VV L V + E V LV E +L L+K G +E + L Q ++ +
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFE-HVDQDLRTYLDKAPPPGLPAET-IKDLMRQFLRGL 125
Query: 156 LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEV 215
+ H +VHRDLKPENIL+ + + +KLADFGLA +L V + +Y APEV
Sbjct: 126 DFLHANCIVHRDLKPENILVTSGGT---VKLADFGLARIYSYQMALFPVVVTLWYRAPEV 182
Query: 216 -LAGGYNQAADVWSAGVILYILLSGMPPFWGNTKS----RIFDAVRTA-------DLRFP 263
L Y D+WS G I + P F GN+++ +IFD + D+ P
Sbjct: 183 LLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLP 242
Query: 264 SNPW------------DHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPE 309
+ + +S L++ ML+ +P +R++A + L HS++ +PE
Sbjct: 243 RGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNPE 300
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 134/286 (46%), Gaps = 34/286 (11%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
R+ + L + +G G V++ E A K I ++ T DE + EI+ M++
Sbjct: 9 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDE--LLKEIQAMSQCH 66
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE--------KFGRFSEAEARVLFMQL 151
HPN+V + +D + LVM+L +GG + ++ K G E+ + ++
Sbjct: 67 -HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 125
Query: 152 MQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT------V 205
++ + Y H+ G +HRD+K NILL S +++ADFG++ ++ G + V
Sbjct: 126 LEGLEYLHKNGQIHRDVKAGNILLGEDGS---VQIADFGVSAFLATGGDITRNKVRKTFV 182
Query: 206 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFP 263
G+P ++APEV+ GY+ AD+WS G+ L +G P+ ++ D P
Sbjct: 183 GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQND---P 239
Query: 264 SNPWDHISD---------SAKDLVMGMLSTDPSQRLTARQVLDHSW 300
+ + D S + ++ L DP +R TA ++L H +
Sbjct: 240 PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKF 285
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 134/286 (46%), Gaps = 34/286 (11%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
R+ + L + +G G V++ E A K I ++ T DE + EI+ M++
Sbjct: 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDE--LLKEIQAMSQCH 71
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE--------KFGRFSEAEARVLFMQL 151
HPN+V + +D + LVM+L +GG + ++ K G E+ + ++
Sbjct: 72 -HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 130
Query: 152 MQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT------V 205
++ + Y H+ G +HRD+K NILL S +++ADFG++ ++ G + V
Sbjct: 131 LEGLEYLHKNGQIHRDVKAGNILLGEDGS---VQIADFGVSAFLATGGDITRNKVRKTFV 187
Query: 206 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFP 263
G+P ++APEV+ GY+ AD+WS G+ L +G P+ ++ D P
Sbjct: 188 GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQND---P 244
Query: 264 SNPWDHISD---------SAKDLVMGMLSTDPSQRLTARQVLDHSW 300
+ + D S + ++ L DP +R TA ++L H +
Sbjct: 245 PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKF 290
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 131/297 (44%), Gaps = 39/297 (13%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKL--EIEIMTRLSG--HPN 103
++G G +G + D +G A KS+ + E+ ++ RL HPN
Sbjct: 16 EIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPN 75
Query: 104 VVDLKAV-----YEDEDYVHLVMELCAGGELFHRLEKFGR--FSEAEARVLFMQLMQVVL 156
VV L V + E V LV E +L L+K + L Q ++ +
Sbjct: 76 VVRLMDVCATSRTDREIKVTLVFE-HVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLD 134
Query: 157 YCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEV- 215
+ H +VHRDLKPENIL+ + + +KLADFGLA +L V + +Y APEV
Sbjct: 135 FLHANCIVHRDLKPENILVTSGGT---VKLADFGLARIYSYQMALTPVVVTLWYRAPEVL 191
Query: 216 LAGGYNQAADVWSAGVILYILLSGMPPFWGNTKS----RIFDAVRTA-------DLRFPS 264
L Y D+WS G I + P F GN+++ +IFD + D+ P
Sbjct: 192 LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPR 251
Query: 265 NPW------------DHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPE 309
+ + +S L++ ML+ +P +R++A + L HS++ +PE
Sbjct: 252 GAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNPE 308
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 136/305 (44%), Gaps = 46/305 (15%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
Q+ ++ R+ +G G +G++ D A K I+ T +R+++ EI+I
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYC-QRTLR-EIKI 78
Query: 95 MTRLSGHPNVVDLKAVY-----EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM 149
+ R H N++ + + E V++V +L ++L K S
Sbjct: 79 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 135
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLG----TV 205
Q+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA +P G V
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLXEXV 192
Query: 206 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAV-------- 255
+ +Y APE++ + GY ++ D+WS G IL +LS P F G + +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 256 ------------RTADLRFPSN---PWDHI---SDS-AKDLVMGMLSTDPSQRLTARQVL 296
R L P PW+ + +DS A DL+ ML+ +P +R+ Q L
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 297 DHSWM 301
H ++
Sbjct: 313 AHPYL 317
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 136/305 (44%), Gaps = 46/305 (15%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
Q+ ++ R+ +G G +G++ D A K I+ T +R+++ EI+I
Sbjct: 22 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYC-QRTLR-EIKI 79
Query: 95 MTRLSGHPNVVDLKAVY-----EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM 149
+ R H N++ + + E V++V +L ++L K S
Sbjct: 80 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 136
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLG----TV 205
Q+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA +P G V
Sbjct: 137 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLXEXV 193
Query: 206 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAV-------- 255
+ +Y APE++ + GY ++ D+WS G IL +LS P F G + +
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 253
Query: 256 ------------RTADLRFPSN---PWDHI---SDS-AKDLVMGMLSTDPSQRLTARQVL 296
R L P PW+ + +DS A DL+ ML+ +P +R+ Q L
Sbjct: 254 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 313
Query: 297 DHSWM 301
H ++
Sbjct: 314 AHPYL 318
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 136/305 (44%), Gaps = 46/305 (15%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
Q+ ++ R+ +G G +G++ D A K I+ T +R+++ EI+I
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYC-QRTLR-EIKI 78
Query: 95 MTRLSGHPNVVDLKAVY-----EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM 149
+ R H N++ + + E V++V +L ++L K S
Sbjct: 79 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKCQHLSNDHICYFLY 135
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLG----TV 205
Q+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA +P G V
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 206 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAV-------- 255
+ +Y APE++ + GY ++ D+WS G IL +LS P F G + +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 256 ------------RTADLRFPSN---PWDHI---SDS-AKDLVMGMLSTDPSQRLTARQVL 296
R L P PW+ + +DS A DL+ ML+ +P +R+ Q L
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 297 DHSWM 301
H ++
Sbjct: 313 AHPYL 317
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 136/303 (44%), Gaps = 42/303 (13%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVK----LEIEIMT 96
+R+ +LG G +G + D T E A K I + +E V E+ ++
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEH-----EEEGVPGTAIREVSLLK 88
Query: 97 RLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVL 156
L H N+++LK+V +HL+ E A +L ++K S + QL+ V
Sbjct: 89 ELQ-HRNIIELKSVIHHNHRLHLIFEY-AENDLKKYMDKNPDVSMRVIKSFLYQLINGVN 146
Query: 157 YCHEIGVVHRDLKPENILLA-TKASSSPI-KLADFGLA-TYIEPGQSLLGTVGSPFYIAP 213
+CH +HRDLKP+N+LL+ + AS +P+ K+ DFGLA + P + + + +Y P
Sbjct: 147 FCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPP 206
Query: 214 EVLAGG--YNQAADVWSAGVILYILLSGMPPFWGNTKS----RIFDAVRTAD-------L 260
E+L G Y+ + D+WS I +L P F G+++ +IF+ + D
Sbjct: 207 EILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVT 266
Query: 261 RFPSNPWDHISDSAKDL--VMG-------------MLSTDPSQRLTARQVLDHSWMGDGI 305
P K L V+G ML DP +R++A+ L+H +
Sbjct: 267 ALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHND 326
Query: 306 QDP 308
DP
Sbjct: 327 FDP 329
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 136/305 (44%), Gaps = 46/305 (15%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
Q+ ++ R+ +G G +G++ D A K I+ T +R+++ EI+I
Sbjct: 22 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYC-QRTLR-EIKI 79
Query: 95 MTRLSGHPNVVDLKAVY-----EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM 149
+ R H N++ + + E V++V +L ++L K S
Sbjct: 80 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 136
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLG----TV 205
Q+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA +P G V
Sbjct: 137 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 193
Query: 206 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAV-------- 255
+ +Y APE++ + GY ++ D+WS G IL +LS P F G + +
Sbjct: 194 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 253
Query: 256 ------------RTADLRFPSN---PWDHI---SDS-AKDLVMGMLSTDPSQRLTARQVL 296
R L P PW+ + +DS A DL+ ML+ +P +R+ Q L
Sbjct: 254 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 313
Query: 297 DHSWM 301
H ++
Sbjct: 314 AHPYL 318
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 136/305 (44%), Gaps = 46/305 (15%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
Q+ ++ R+ +G G +G++ D A K I+ T +R+++ EI+I
Sbjct: 23 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYC-QRTLR-EIKI 80
Query: 95 MTRLSGHPNVVDLKAVY-----EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM 149
+ R H N++ + + E V++V +L ++L K S
Sbjct: 81 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 137
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLG----TV 205
Q+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA +P G V
Sbjct: 138 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 194
Query: 206 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAV-------- 255
+ +Y APE++ + GY ++ D+WS G IL +LS P F G + +
Sbjct: 195 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 254
Query: 256 ------------RTADLRFPSN---PWDHI---SDS-AKDLVMGMLSTDPSQRLTARQVL 296
R L P PW+ + +DS A DL+ ML+ +P +R+ Q L
Sbjct: 255 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 314
Query: 297 DHSWM 301
H ++
Sbjct: 315 AHPYL 319
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 136/305 (44%), Gaps = 46/305 (15%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
Q+ ++ R+ +G G +G++ D A K I+ T +R+++ EI+I
Sbjct: 14 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYC-QRTLR-EIKI 71
Query: 95 MTRLSGHPNVVDLKAVY-----EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM 149
+ R H N++ + + E V++V +L ++L K S
Sbjct: 72 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 128
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLG----TV 205
Q+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA +P G V
Sbjct: 129 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 185
Query: 206 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAV-------- 255
+ +Y APE++ + GY ++ D+WS G IL +LS P F G + +
Sbjct: 186 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 245
Query: 256 ------------RTADLRFPSN---PWDHI---SDS-AKDLVMGMLSTDPSQRLTARQVL 296
R L P PW+ + +DS A DL+ ML+ +P +R+ Q L
Sbjct: 246 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 305
Query: 297 DHSWM 301
H ++
Sbjct: 306 AHPYL 310
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 136/305 (44%), Gaps = 46/305 (15%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
Q+ ++ R+ +G G +G++ D A K I+ T +R+++ EI+I
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYC-QRTLR-EIKI 78
Query: 95 MTRLSGHPNVVDLKAVY-----EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM 149
+ R H N++ + + E V++V +L ++L K S
Sbjct: 79 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 135
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLG----TV 205
Q+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA +P G V
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 206 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAV-------- 255
+ +Y APE++ + GY ++ D+WS G IL +LS P F G + +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 256 ------------RTADLRFPSN---PWDHI---SDS-AKDLVMGMLSTDPSQRLTARQVL 296
R L P PW+ + +DS A DL+ ML+ +P +R+ Q L
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 297 DHSWM 301
H ++
Sbjct: 313 AHPYL 317
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 136/305 (44%), Gaps = 46/305 (15%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
Q+ ++ R+ +G G +G++ D A K I+ T +R+++ EI+I
Sbjct: 15 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYC-QRTLR-EIKI 72
Query: 95 MTRLSGHPNVVDLKAVY-----EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM 149
+ R H N++ + + E V++V +L ++L K S
Sbjct: 73 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 129
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLG----TV 205
Q+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA +P G V
Sbjct: 130 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 206 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAV-------- 255
+ +Y APE++ + GY ++ D+WS G IL +LS P F G + +
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 246
Query: 256 ------------RTADLRFPSN---PWDHI---SDS-AKDLVMGMLSTDPSQRLTARQVL 296
R L P PW+ + +DS A DL+ ML+ +P +R+ Q L
Sbjct: 247 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 306
Query: 297 DHSWM 301
H ++
Sbjct: 307 AHPYL 311
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 136/305 (44%), Gaps = 46/305 (15%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
Q+ ++ R+ +G G +G++ D A K I+ T +R+++ EI+I
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYC-QRTLR-EIKI 78
Query: 95 MTRLSGHPNVVDLKAVY-----EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM 149
+ R H N++ + + E V++V +L ++L K S
Sbjct: 79 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 135
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLG----TV 205
Q+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA +P G V
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNT---TXDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 206 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAV-------- 255
+ +Y APE++ + GY ++ D+WS G IL +LS P F G + +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 256 ------------RTADLRFPSN---PWDHI---SDS-AKDLVMGMLSTDPSQRLTARQVL 296
R L P PW+ + +DS A DL+ ML+ +P +R+ Q L
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 297 DHSWM 301
H ++
Sbjct: 313 AHPYL 317
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 136/305 (44%), Gaps = 46/305 (15%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
Q+ ++ R+ +G G +G++ D A K I+ T +R+++ EI+I
Sbjct: 15 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYC-QRTLR-EIKI 72
Query: 95 MTRLSGHPNVVDLKAVY-----EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM 149
+ R H N++ + + E V++V +L ++L K S
Sbjct: 73 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 129
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLG----TV 205
Q+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA +P G V
Sbjct: 130 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 186
Query: 206 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAV-------- 255
+ +Y APE++ + GY ++ D+WS G IL +LS P F G + +
Sbjct: 187 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPE 246
Query: 256 ------------RTADLRFPSN---PWDHI---SDS-AKDLVMGMLSTDPSQRLTARQVL 296
R L P PW+ + +DS A DL+ ML+ +P +R+ Q L
Sbjct: 247 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 306
Query: 297 DHSWM 301
H ++
Sbjct: 307 AHPYL 311
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 138/298 (46%), Gaps = 44/298 (14%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKL--EIEIMTRLSG--HPN 103
++G G +G + D +G A KS+ R+ ++ + E+ ++ RL HPN
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSV---RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 104 VVDLKAV-----YEDEDYVHLVMELCAGGELFHRLEKF---GRFSEAEARVLFMQLMQVV 155
VV L V + E V LV E +L L+K G +E + L Q ++ +
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFE-HVDQDLRTYLDKAPPPGLPAET-IKDLMRQFLRGL 125
Query: 156 LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEV 215
+ H +VHRDLKPENIL+ + + +KLADFGLA +L V + +Y APEV
Sbjct: 126 DFLHANCIVHRDLKPENILVTSGGT---VKLADFGLARIYSYQMALAPVVVTLWYRAPEV 182
Query: 216 -LAGGYNQAADVWSAGVILYILLSGMPPFWGNTKS----RIFDAVRTA-------DLRFP 263
L Y D+WS G I + P F GN+++ +IFD + D+ P
Sbjct: 183 LLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLP 242
Query: 264 SNPW------------DHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPE 309
+ + +S L++ ML+ +P +R++A + L HS++ +PE
Sbjct: 243 RGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNPE 300
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/325 (26%), Positives = 149/325 (45%), Gaps = 54/325 (16%)
Query: 21 YRVRSLAETILDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLV 80
YR + LA+TI + + ER+ +G G +G + D TG A K +++
Sbjct: 5 YR-QELAKTIWE------VPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQS 57
Query: 81 TIDDERSVKLEIEIMTRLSGHPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLE 134
I +R+ + E+ ++ + H NV+ L V+ E+ + V+LV L G +L + +
Sbjct: 58 IIHAKRTYR-ELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIV 113
Query: 135 KFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATY 194
K + ++ + L Q+++ + Y H ++HRDLKP N+ + +K+ DFGLA +
Sbjct: 114 KCAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARH 170
Query: 195 IEPGQSLLGTVGSPFYIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWG------- 245
+ + G V + +Y APE++ YNQ D+WS G I+ LL+G F G
Sbjct: 171 TD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 228
Query: 246 ---------------------NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLST 284
+ ++ I + + F +N + + A DL+ ML
Sbjct: 229 KLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNF-ANVFIGANPLAVDLLEKMLVL 287
Query: 285 DPSQRLTARQVLDHSWMGDGIQDPE 309
D +R+TA Q L H++ DP+
Sbjct: 288 DSDKRITAAQALAHAYFAQ-YHDPD 311
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 140/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 81
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 82 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 139
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + S +K+ DFGLA + + + G V + +Y APE
Sbjct: 140 LKYIHSADIIHRDLKPSNLAV---NEDSELKILDFGLARHTD--DEMTGYVATRWYRAPE 194
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 254
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 255 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 312
Query: 305 IQDPE 309
DP+
Sbjct: 313 YHDPD 317
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 136/305 (44%), Gaps = 46/305 (15%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
Q+ ++ R+ +G G +G++ D A K I+ T +R+++ EI+I
Sbjct: 19 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYC-QRTLR-EIKI 76
Query: 95 MTRLSGHPNVVDLKAVY-----EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM 149
+ R H N++ + + E V++V +L ++L K S
Sbjct: 77 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 133
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLG----TV 205
Q+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA +P G V
Sbjct: 134 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 206 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAV-------- 255
+ +Y APE++ + GY ++ D+WS G IL +LS P F G + +
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 250
Query: 256 ------------RTADLRFPSN---PWDHI---SDS-AKDLVMGMLSTDPSQRLTARQVL 296
R L P PW+ + +DS A DL+ ML+ +P +R+ Q L
Sbjct: 251 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 310
Query: 297 DHSWM 301
H ++
Sbjct: 311 AHPYL 315
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 135/305 (44%), Gaps = 46/305 (15%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
Q+ ++ R+ +G G +G++ D A K I+ T +R+++ EI+I
Sbjct: 25 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYC-QRTLR-EIKI 82
Query: 95 MTRLSGHPNVVDLKAVY-----EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM 149
+ R H N++ + + E V++V +L ++L K S
Sbjct: 83 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 139
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLG----TV 205
Q+++ + Y H V+HRDLKP N+LL T +K+ DFGLA +P G V
Sbjct: 140 QILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYV 196
Query: 206 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAV-------- 255
+ +Y APE++ + GY ++ D+WS G IL +LS P F G + +
Sbjct: 197 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 256
Query: 256 ------------RTADLRFPSN---PWDHI---SDS-AKDLVMGMLSTDPSQRLTARQVL 296
R L P PW+ + +DS A DL+ ML+ +P +R+ Q L
Sbjct: 257 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 316
Query: 297 DHSWM 301
H ++
Sbjct: 317 AHPYL 321
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 135/305 (44%), Gaps = 46/305 (15%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
Q+ ++ R+ +G G +G++ D A K I+ T +R+++ EI+I
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYC-QRTLR-EIKI 74
Query: 95 MTRLSGHPNVVDLKAVY-----EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM 149
+ R H N++ + + E V++V +L ++L K S
Sbjct: 75 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 131
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLG----TV 205
Q+++ + Y H V+HRDLKP N+LL T +K+ DFGLA +P G V
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYV 188
Query: 206 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAV-------- 255
+ +Y APE++ + GY ++ D+WS G IL +LS P F G + +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 256 ------------RTADLRFPSN---PWDHI---SDS-AKDLVMGMLSTDPSQRLTARQVL 296
R L P PW+ + +DS A DL+ ML+ +P +R+ Q L
Sbjct: 249 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 297 DHSWM 301
H ++
Sbjct: 309 AHPYL 313
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 140/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 85
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 86 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 143
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + S +K+ DFGLA + + + G V + +Y APE
Sbjct: 144 LKYIHSADIIHRDLKPSNLAV---NEDSELKILDFGLARHTD--DEMTGYVATRWYRAPE 198
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 258
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 259 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 316
Query: 305 IQDPE 309
DP+
Sbjct: 317 YHDPD 321
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 137/305 (44%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 99
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G + + K + ++ + L Q+++
Sbjct: 100 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMXGXVATRWYRAPE 212
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 272
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 273 ESARNYIQSLAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 330
Query: 305 IQDPE 309
DP+
Sbjct: 331 YHDPD 335
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 109/222 (49%), Gaps = 12/222 (5%)
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQ 150
E++++ HPNV+ +D + ++ +ELCA + +K E L Q
Sbjct: 67 EVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQ 126
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLATKASSSPIK--LADFGLATYIEPGQSLL----GT 204
+ + H + +VHRDLKP NIL++ + IK ++DFGL + G+ G
Sbjct: 127 TTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGV 186
Query: 205 VGSPFYIAPEVLAGGYNQ----AADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTAD 259
G+ +IAPE+L+ + D++SAG + Y ++S G PF G + R + + A
Sbjct: 187 PGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPF-GKSLQRQANILLGAC 245
Query: 260 LRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
+P H A++L+ M++ DP +R +A+ VL H +
Sbjct: 246 SLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF 287
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 136/305 (44%), Gaps = 46/305 (15%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
Q+ ++ R+ +G G +G++ D A K I+ T +R+++ EI+I
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYC-QRTLR-EIKI 74
Query: 95 MTRLSGHPNVVDLKAVY-----EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM 149
+ R H N++ + + E V++V +L ++L K S
Sbjct: 75 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 131
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLG----TV 205
Q+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA +P G V
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 206 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAV-------- 255
+ +Y APE++ + GY ++ D+WS G IL +LS P F G + +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 256 ------------RTADLRFPSN---PWDHI---SDS-AKDLVMGMLSTDPSQRLTARQVL 296
R L P PW+ + +DS A DL+ ML+ +P +R+ Q L
Sbjct: 249 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 297 DHSWM 301
H ++
Sbjct: 309 AHPYL 313
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 140/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 79
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 192
Query: 215 VL--AGGYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ A YNQ D+WS G I+ LL+G F G
Sbjct: 193 IMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 253 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 310
Query: 305 IQDPE 309
DP+
Sbjct: 311 YHDPD 315
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 135/305 (44%), Gaps = 46/305 (15%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
Q+ ++ R+ +G G +G++ D A K I+ T +R+++ EI+I
Sbjct: 37 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYC-QRTLR-EIKI 94
Query: 95 MTRLSGHPNVVDLKAVY-----EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM 149
+ R H N++ + + E V++V +L ++L K S
Sbjct: 95 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 151
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLG----TV 205
Q+++ + Y H V+HRDLKP N+LL T +K+ DFGLA +P G V
Sbjct: 152 QILRGLKYIHSANVLHRDLKPSNLLLNTTCD---LKICDFGLARVADPDHDHTGFLTEYV 208
Query: 206 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAV-------- 255
+ +Y APE++ + GY ++ D+WS G IL +LS P F G + +
Sbjct: 209 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 268
Query: 256 ------------RTADLRFPSN---PWDHI---SDS-AKDLVMGMLSTDPSQRLTARQVL 296
R L P PW+ + +DS A DL+ ML+ +P +R+ Q L
Sbjct: 269 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 328
Query: 297 DHSWM 301
H ++
Sbjct: 329 AHPYL 333
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 136/305 (44%), Gaps = 46/305 (15%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
Q+ ++ R+ +G G +G++ D A K I+ T +R+++ EI+I
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYC-QRTLR-EIKI 74
Query: 95 MTRLSGHPNVVDLKAVY-----EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM 149
+ R H N++ + + E V++V +L ++L K S
Sbjct: 75 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 131
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLG----TV 205
Q+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA +P G V
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNT---TXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 206 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAV-------- 255
+ +Y APE++ + GY ++ D+WS G IL +LS P F G + +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 256 ------------RTADLRFPSN---PWDHI---SDS-AKDLVMGMLSTDPSQRLTARQVL 296
R L P PW+ + +DS A DL+ ML+ +P +R+ Q L
Sbjct: 249 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 297 DHSWM 301
H ++
Sbjct: 309 AHPYL 313
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 137/305 (44%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 99
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G + + K + ++ + L Q+++
Sbjct: 100 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 212
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 272
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 273 ESARNYIQSLAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 330
Query: 305 IQDPE 309
DP+
Sbjct: 331 YHDPD 335
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 136/305 (44%), Gaps = 46/305 (15%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
Q+ ++ R+ +G G +G++ D A K I+ T +R+++ EI+I
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYC-QRTLR-EIKI 74
Query: 95 MTRLSGHPNVVDLKAVY-----EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM 149
+ R H N++ + + E V++V +L ++L K S
Sbjct: 75 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 131
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLG----TV 205
Q+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA +P G V
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNT---TXDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 206 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAV-------- 255
+ +Y APE++ + GY ++ D+WS G IL +LS P F G + +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 256 ------------RTADLRFPSN---PWDHI---SDS-AKDLVMGMLSTDPSQRLTARQVL 296
R L P PW+ + +DS A DL+ ML+ +P +R+ Q L
Sbjct: 249 QEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 297 DHSWM 301
H ++
Sbjct: 309 AHPYL 313
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 123/272 (45%), Gaps = 14/272 (5%)
Query: 34 NQISNL--RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLE 91
NQ S + E F ++G G FG + D T EV A K I D D+ ++ E
Sbjct: 10 NQHSRVDPEELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKII--DLEEAEDEIEDIQQE 67
Query: 92 IEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQL 151
I ++++ P + Y + ++ME GG L K G E + ++
Sbjct: 68 ITVLSQCDS-PYITRYFGSYLKSTKLWIIMEYLGGGSALDLL-KPGPLEETYIATILREI 125
Query: 152 MQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT-VGSPFY 210
++ + Y H +HRD+K N+LL+ + +KLADFG+A + Q VG+PF+
Sbjct: 126 LKGLDYLHSERKIHRDIKAANVLLSEQGD---VKLADFGVAGQLTDTQIKRNXFVGTPFW 182
Query: 211 IAPEVLA-GGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDH 269
+APEV+ Y+ AD+WS G+ L G PP N+ + P
Sbjct: 183 MAPEVIKQSAYDFKADIWSLGITAIELAKGEPP---NSDLHPMRVLFLIPKNSPPTLEGQ 239
Query: 270 ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
S K+ V L+ DP R TA+++L H ++
Sbjct: 240 HSKPFKEFVEACLNKDPRFRPTAKELLKHKFI 271
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 137/305 (44%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 98
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G + + K + ++ + L Q+++
Sbjct: 99 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 156
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 157 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 211
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 212 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 271
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 272 ESARNYIQSLAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 329
Query: 305 IQDPE 309
DP+
Sbjct: 330 YHDPD 334
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 136/305 (44%), Gaps = 46/305 (15%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
Q+ ++ R+ +G G +G++ D A K I+ T +R+++ EI+I
Sbjct: 17 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYC-QRTLR-EIKI 74
Query: 95 MTRLSGHPNVVDLKAVY-----EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM 149
+ R H N++ + + E V++V +L ++L K S
Sbjct: 75 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 131
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLG----TV 205
Q+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA +P G V
Sbjct: 132 QILRGLKYIHSANVLHRDLKPSNLLLNT---TXDLKIXDFGLARVADPDHDHTGFLTEYV 188
Query: 206 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAV-------- 255
+ +Y APE++ + GY ++ D+WS G IL +LS P F G + +
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 248
Query: 256 ------------RTADLRFPSN---PWDHI---SDS-AKDLVMGMLSTDPSQRLTARQVL 296
R L P PW+ + +DS A DL+ ML+ +P +R+ Q L
Sbjct: 249 QEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 308
Query: 297 DHSWM 301
H ++
Sbjct: 309 AHPYL 313
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 136/305 (44%), Gaps = 46/305 (15%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
Q+ ++ R+ +G G +G++ D A + I+ T +R+++ EI+I
Sbjct: 21 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYC-QRTLR-EIKI 78
Query: 95 MTRLSGHPNVVDLKAVY-----EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM 149
+ R H N++ + + E V++V +L ++L K S
Sbjct: 79 LLRFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 135
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLG----TV 205
Q+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA +P G V
Sbjct: 136 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 192
Query: 206 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAV-------- 255
+ +Y APE++ + GY ++ D+WS G IL +LS P F G + +
Sbjct: 193 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 252
Query: 256 ------------RTADLRFPSN---PWDHI---SDS-AKDLVMGMLSTDPSQRLTARQVL 296
R L P PW+ + +DS A DL+ ML+ +P +R+ Q L
Sbjct: 253 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 312
Query: 297 DHSWM 301
H ++
Sbjct: 313 AHPYL 317
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 137/305 (44%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K ++K I +R+ + E+ ++ +
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR-ELRLLKHMK- 91
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G + + K + ++ + L Q+++
Sbjct: 92 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 149
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 150 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 204
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 264
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 265 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 322
Query: 305 IQDPE 309
DP+
Sbjct: 323 YHDPD 327
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 136/298 (45%), Gaps = 46/298 (15%)
Query: 42 RFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH 101
R+ Q +G G +G++ D A K I+ T +R+++ EI+I+ R H
Sbjct: 44 RYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYC-QRTLR-EIQILLRFR-H 100
Query: 102 PNVVDLKAVY-----EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVL 156
NV+ ++ + E V++V +L ++L K + S Q+++ +
Sbjct: 101 ENVIGIRDILRASTLEAMRDVYIVQDLMETD--LYKLLKSQQLSNDHICYFLYQILRGLK 158
Query: 157 YCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLG----TVGSPFYIA 212
Y H V+HRDLKP N+L+ T +K+ DFGLA +P G V + +Y A
Sbjct: 159 YIHSANVLHRDLKPSNLLINTTCD---LKICDFGLARIADPEHDHTGFLTEXVATRWYRA 215
Query: 213 PEVL--AGGYNQAADVWSAGVILYILLSGMPPFWG-------NTKSRIFDAVRTADLR-- 261
PE++ + GY ++ D+WS G IL +LS P F G N I + DL
Sbjct: 216 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCI 275
Query: 262 -----------FPSN---PWDHI---SDS-AKDLVMGMLSTDPSQRLTARQVLDHSWM 301
PS W + SDS A DL+ ML+ +P++R+T + L H ++
Sbjct: 276 INMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYL 333
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 138/298 (46%), Gaps = 44/298 (14%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKL--EIEIMTRLSG--HPN 103
++G G +G + D +G A KS+ R+ ++ + E+ ++ RL HPN
Sbjct: 11 EIGVGAYGTVYKARDPHSGHFVALKSV---RVPNGEEGLPISTVREVALLRRLEAFEHPN 67
Query: 104 VVDLKAV-----YEDEDYVHLVMELCAGGELFHRLEKF---GRFSEAEARVLFMQLMQVV 155
VV L V + E V LV E +L L+K G +E + L Q ++ +
Sbjct: 68 VVRLMDVCATSRTDREIKVTLVFE-HVDQDLRTYLDKAPPPGLPAET-IKDLMRQFLRGL 125
Query: 156 LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEV 215
+ H +VHRDLKPENIL+ + + +KLADFGLA +L V + +Y APEV
Sbjct: 126 DFLHANCIVHRDLKPENILVTSGGT---VKLADFGLARIYSYQMALDPVVVTLWYRAPEV 182
Query: 216 -LAGGYNQAADVWSAGVILYILLSGMPPFWGNTKS----RIFDAVRTA-------DLRFP 263
L Y D+WS G I + P F GN+++ +IFD + D+ P
Sbjct: 183 LLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLP 242
Query: 264 SNPW------------DHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPE 309
+ + +S L++ ML+ +P +R++A + L HS++ +PE
Sbjct: 243 RGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDEGNPE 300
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 79
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 192
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 253 ESARNYIQSLAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 310
Query: 305 IQDPE 309
DP+
Sbjct: 311 YHDPD 315
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 75
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 76 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 133
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 188
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 248
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 249 ESARNYIQSLAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 306
Query: 305 IQDPE 309
DP+
Sbjct: 307 YHDPD 311
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 32 ERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 89
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 90 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 147
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 148 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 202
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 203 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 262
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 263 ESARNYIQSLAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 320
Query: 305 IQDPE 309
DP+
Sbjct: 321 YHDPD 325
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 136/306 (44%), Gaps = 46/306 (15%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
Q+ ++ R+ +G G +G++ D A K I+ T +R+++ EI+I
Sbjct: 19 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYC-QRTLR-EIKI 76
Query: 95 MTRLSGHPNVVDLKAVY-----EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM 149
+ H N++ + + E V++V +L ++L K S
Sbjct: 77 LLAFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 133
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLG----TV 205
Q+++ + Y H V+HRDLKP N+LL T +S +K+ DFGLA +P G V
Sbjct: 134 QILRGLKYIHSANVLHRDLKPSNLLLNT---TSDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 206 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAV-------- 255
+ +Y APE++ + GY ++ D+WS G IL +LS P F G + +
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 250
Query: 256 ------------RTADLRFPSN---PWDHI---SDS-AKDLVMGMLSTDPSQRLTARQVL 296
R L P PW+ + +DS A DL+ ML+ +P +R+ Q L
Sbjct: 251 QEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 310
Query: 297 DHSWMG 302
H ++
Sbjct: 311 AHPYLA 316
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 141/315 (44%), Gaps = 48/315 (15%)
Query: 8 NSSSEPSRQPCKCYRVRSLAETILDTNQISNLRERFVLGQQLGWGQFGV----IRVCSDK 63
NS + PC LA + L ++ +G LG G FG IRV SD
Sbjct: 22 NSLAHLRAAPCNDLHATKLAPG----KEKEPLESQYQVGPLLGSGGFGSVYSGIRV-SDN 76
Query: 64 FTGEVFACKSIAKDRLV---TIDDERSVKLEIEIMTRLS-GHPNVVDLKAVYEDEDYVHL 119
A K + KDR+ + + V +E+ ++ ++S G V+ L +E D L
Sbjct: 77 LP---VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL 133
Query: 120 VMELCAG-GELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATK 178
++E +LF + + G E AR F Q+++ V +CH GV+HRD+K ENIL+
Sbjct: 134 ILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--D 191
Query: 179 ASSSPIKLADFGLATYIEPGQSLLGTV-----GSPFYIAPEVLAGG--YNQAADVWSAGV 231
+ +KL DFG G L TV G+ Y PE + + ++A VWS G+
Sbjct: 192 LNRGELKLIDFG------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 245
Query: 232 ILYILLSGMPPFWGN---TKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQ 288
+LY ++ G PF + + ++F R +S + L+ L+ PS
Sbjct: 246 LLYDMVCGDIPFEHDEEIIRGQVFFRQR-------------VSSECQHLIRWCLALRPSD 292
Query: 289 RLTARQVLDHSWMGD 303
R T ++ +H WM D
Sbjct: 293 RPTFEEIQNHPWMQD 307
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 141/315 (44%), Gaps = 48/315 (15%)
Query: 8 NSSSEPSRQPCKCYRVRSLAETILDTNQISNLRERFVLGQQLGWGQFGV----IRVCSDK 63
NS + PC LA + L ++ +G LG G FG IRV SD
Sbjct: 7 NSLAHLRAAPCNDLHATKLAPG----KEKEPLESQYQVGPLLGSGGFGSVYSGIRV-SDN 61
Query: 64 FTGEVFACKSIAKDRLV---TIDDERSVKLEIEIMTRLS-GHPNVVDLKAVYEDEDYVHL 119
A K + KDR+ + + V +E+ ++ ++S G V+ L +E D L
Sbjct: 62 LP---VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL 118
Query: 120 VMELCAG-GELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATK 178
++E +LF + + G E AR F Q+++ V +CH GV+HRD+K ENIL+
Sbjct: 119 ILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--D 176
Query: 179 ASSSPIKLADFGLATYIEPGQSLLGTV-----GSPFYIAPEVLAGG--YNQAADVWSAGV 231
+ +KL DFG G L TV G+ Y PE + + ++A VWS G+
Sbjct: 177 LNRGELKLIDFG------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 230
Query: 232 ILYILLSGMPPFWGN---TKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQ 288
+LY ++ G PF + + ++F R +S + L+ L+ PS
Sbjct: 231 LLYDMVCGDIPFEHDEEIIRGQVFFRQR-------------VSSECQHLIRWCLALRPSD 277
Query: 289 RLTARQVLDHSWMGD 303
R T ++ +H WM D
Sbjct: 278 RPTFEEIQNHPWMQD 292
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 156/340 (45%), Gaps = 58/340 (17%)
Query: 6 QSNSSSEPSRQPCKCYRVRSLAETILDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFT 65
QSN+S E +P YR + L +TI + + ER+ +G G +G + D T
Sbjct: 21 QSNASQE---RPT-FYR-QELNKTIWE------VPERYQNLSPVGSGAYGSVCAAFDTKT 69
Query: 66 GEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVY------EDEDYVHL 119
G A K +++ I +R+ + E+ ++ + H NV+ L V+ E+ + V+L
Sbjct: 70 GLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK-HENVIGLLDVFTPARSLEEFNDVYL 127
Query: 120 VMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKA 179
V L G +L + + K + ++ + L Q+++ + Y H ++HRDLKP N+ +
Sbjct: 128 VTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDC 185
Query: 180 SSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAG--GYNQAADVWSAGVILYILL 237
+K+ DFGLA + + + G V + +Y APE++ YNQ D+WS G I+ LL
Sbjct: 186 E---LKILDFGLARHTD--DEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELL 240
Query: 238 SGMPPFWG----------------------------NTKSRIFDAVRTADLRFPSNPWDH 269
+G F G + ++ I + + F +N +
Sbjct: 241 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNF-ANVFIG 299
Query: 270 ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPE 309
+ A DL+ ML D +R+TA Q L H++ DP+
Sbjct: 300 ANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ-YHDPD 338
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 129/264 (48%), Gaps = 17/264 (6%)
Query: 37 SNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMT 96
S+L +R+ LG+ LG+G + + D A K + D + D ++ E
Sbjct: 8 SHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRAD--LARDPSFYLRFRREAQN 65
Query: 97 RLS-GHPNVVDLKAVYEDEDYV----HLVMELCAGGELFHRLEKFGRFSEAEARVLFMQL 151
+ HP +V + A E E ++VME G L + G + A +
Sbjct: 66 AAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA 125
Query: 152 MQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYI-EPGQSLLGT---VGS 207
Q + + H+ G++HRD+KP NI++ ++++ +K+ DFG+A I + G S+ T +G+
Sbjct: 126 CQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
Query: 208 PFYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGNTK-SRIFDAVRTADLRFPSN 265
Y++PE G + +DV+S G +LY +L+G PPF G++ S + VR D PS
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE-DPIPPSA 241
Query: 266 PWDHISDSAKDLVMGMLSTDPSQR 289
+ +S +V+ L+ +P R
Sbjct: 242 RHEGLSADLDAVVLKALAKNPENR 265
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 134/284 (47%), Gaps = 44/284 (15%)
Query: 39 LRERFVLGQQLGWGQFGV----IRVCSDKFTGEVFACKSIAKDRLV---TIDDERSVKLE 91
L ++ +G LG G FG IRV SD A K + KDR+ + + V +E
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRV-SDNLP---VAIKHVEKDRISDWGELPNGTRVPME 61
Query: 92 IEIMTRLS-GHPNVVDLKAVYEDEDYVHLVME-LCAGGELFHRLEKFGRFSEAEARVLFM 149
+ ++ ++S G V+ L +E D L++E + +LF + + G E AR F
Sbjct: 62 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFW 121
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTV---- 205
Q+++ V +CH GV+HRD+K ENIL+ + +KL DFG G L TV
Sbjct: 122 QVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFG------SGALLKDTVYTDF 173
Query: 206 -GSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGN---TKSRIFDAVRTAD 259
G+ Y PE + + ++A VWS G++LY ++ G PF + + ++F R
Sbjct: 174 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR--- 230
Query: 260 LRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
+S + L+ L+ PS R T ++ +H WM D
Sbjct: 231 ----------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 85
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 86 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 143
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 198
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 258
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 259 ESARNYIQSLAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 316
Query: 305 IQDPE 309
DP+
Sbjct: 317 YHDPD 321
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 75
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 76 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 133
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMAGFVATRWYRAPE 188
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 248
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 249 ESARNYIQSLAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 306
Query: 305 IQDPE 309
DP+
Sbjct: 307 YHDPD 311
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 141/315 (44%), Gaps = 48/315 (15%)
Query: 8 NSSSEPSRQPCKCYRVRSLAETILDTNQISNLRERFVLGQQLGWGQFGV----IRVCSDK 63
NS + PC LA + L ++ +G LG G FG IRV SD
Sbjct: 27 NSLAHLRAAPCNDLHATKLAPG----KEKEPLESQYQVGPLLGSGGFGSVYSGIRV-SDN 81
Query: 64 FTGEVFACKSIAKDRLV---TIDDERSVKLEIEIMTRLS-GHPNVVDLKAVYEDEDYVHL 119
A K + KDR+ + + V +E+ ++ ++S G V+ L +E D L
Sbjct: 82 LP---VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL 138
Query: 120 VMELCAG-GELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATK 178
++E +LF + + G E AR F Q+++ V +CH GV+HRD+K ENIL+
Sbjct: 139 ILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--D 196
Query: 179 ASSSPIKLADFGLATYIEPGQSLLGTV-----GSPFYIAPEVLAGG--YNQAADVWSAGV 231
+ +KL DFG G L TV G+ Y PE + + ++A VWS G+
Sbjct: 197 LNRGELKLIDFG------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 250
Query: 232 ILYILLSGMPPFWGN---TKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQ 288
+LY ++ G PF + + ++F R +S + L+ L+ PS
Sbjct: 251 LLYDMVCGDIPFEHDEEIIRGQVFFRQR-------------VSXECQHLIRWCLALRPSD 297
Query: 289 RLTARQVLDHSWMGD 303
R T ++ +H WM D
Sbjct: 298 RPTFEEIQNHPWMQD 312
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 124/261 (47%), Gaps = 26/261 (9%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI-MTRLSGHPNVVDL 107
LG G +G++ D A K I + D S L EI + + H N+V
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPER-----DSRYSQPLHEEIALHKHLKHKNIVQY 84
Query: 108 KAVYEDEDYVHLVMELCAGGELFHRLE-KFGRFSEAEARVLFM--QLMQVVLYCHEIGVV 164
+ + ++ + ME GG L L K+G + E + F Q+++ + Y H+ +V
Sbjct: 85 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV 144
Query: 165 HRDLKPENILLATKASSSPIKLADFGLATY---IEP-GQSLLGTVGSPFYIAPEVLAGG- 219
HRD+K +N+L+ T S +K++DFG + I P ++ GT+ Y+APE++ G
Sbjct: 145 HRDIKGDNVLINT--YSGVLKISDFGTSKRLAGINPCTETFTGTLQ---YMAPEIIDKGP 199
Query: 220 --YNQAADVWSAGVILYILLSGMPPFW--GNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
Y +AAD+WS G + + +G PPF+ G ++ +F + + + +S AK
Sbjct: 200 RGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMF---KVGMFKVHPEIPESMSAEAK 256
Query: 276 DLVMGMLSTDPSQRLTARQVL 296
++ DP +R A +L
Sbjct: 257 AFILKCFEPDPDKRACANDLL 277
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 79
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMAGFVATRWYRAPE 192
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 253 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 310
Query: 305 IQDPE 309
DP+
Sbjct: 311 YHDPD 315
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 79
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMAGFVATRWYRAPE 192
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 253 ESARNYIQSLAQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 310
Query: 305 IQDPE 309
DP+
Sbjct: 311 YHDPD 315
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 141/315 (44%), Gaps = 48/315 (15%)
Query: 8 NSSSEPSRQPCKCYRVRSLAETILDTNQISNLRERFVLGQQLGWGQFGV----IRVCSDK 63
NS + PC LA + L ++ +G LG G FG IRV SD
Sbjct: 22 NSLAHLRAAPCNDLHATKLAPG----KEKEPLESQYQVGPLLGSGGFGSVYSGIRV-SDN 76
Query: 64 FTGEVFACKSIAKDRLV---TIDDERSVKLEIEIMTRLS-GHPNVVDLKAVYEDEDYVHL 119
A K + KDR+ + + V +E+ ++ ++S G V+ L +E D L
Sbjct: 77 LP---VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL 133
Query: 120 VMELCAG-GELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATK 178
++E +LF + + G E AR F Q+++ V +CH GV+HRD+K ENIL+
Sbjct: 134 ILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--D 191
Query: 179 ASSSPIKLADFGLATYIEPGQSLLGTV-----GSPFYIAPEVLAGG--YNQAADVWSAGV 231
+ +KL DFG G L TV G+ Y PE + + ++A VWS G+
Sbjct: 192 LNRGELKLIDFG------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 245
Query: 232 ILYILLSGMPPFWGN---TKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQ 288
+LY ++ G PF + + ++F R +S + L+ L+ PS
Sbjct: 246 LLYDMVCGDIPFEHDEEIIRGQVFFRQR-------------VSXECQHLIRWCLALRPSD 292
Query: 289 RLTARQVLDHSWMGD 303
R T ++ +H WM D
Sbjct: 293 RPTFEEIQNHPWMQD 307
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 133/284 (46%), Gaps = 44/284 (15%)
Query: 39 LRERFVLGQQLGWGQFGV----IRVCSDKFTGEVFACKSIAKDRLV---TIDDERSVKLE 91
L ++ +G LG G FG IRV SD A K + KDR+ + + V +E
Sbjct: 21 LESQYQVGPLLGSGGFGSVYSGIRV-SDNLP---VAIKHVEKDRISDWGELPNGTRVPME 76
Query: 92 IEIMTRLS-GHPNVVDLKAVYEDEDYVHLVMELCAG-GELFHRLEKFGRFSEAEARVLFM 149
+ ++ ++S G V+ L +E D L++E +LF + + G E AR F
Sbjct: 77 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 136
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTV---- 205
Q+++ V +CH GV+HRD+K ENIL+ + +KL DFG G L TV
Sbjct: 137 QVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFG------SGALLKDTVYTDF 188
Query: 206 -GSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGN---TKSRIFDAVRTAD 259
G+ Y PE + + ++A VWS G++LY ++ G PF + + ++F R
Sbjct: 189 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR--- 245
Query: 260 LRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
+S + L+ L+ PS R T ++ +H WM D
Sbjct: 246 ----------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 133/284 (46%), Gaps = 44/284 (15%)
Query: 39 LRERFVLGQQLGWGQFGV----IRVCSDKFTGEVFACKSIAKDRLV---TIDDERSVKLE 91
L ++ +G LG G FG IRV SD A K + KDR+ + + V +E
Sbjct: 22 LESQYQVGPLLGSGGFGSVYSGIRV-SDNLP---VAIKHVEKDRISDWGELPNGTRVPME 77
Query: 92 IEIMTRLS-GHPNVVDLKAVYEDEDYVHLVMELCAG-GELFHRLEKFGRFSEAEARVLFM 149
+ ++ ++S G V+ L +E D L++E +LF + + G E AR F
Sbjct: 78 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 137
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTV---- 205
Q+++ V +CH GV+HRD+K ENIL+ + +KL DFG G L TV
Sbjct: 138 QVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFG------SGALLKDTVYTDF 189
Query: 206 -GSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGN---TKSRIFDAVRTAD 259
G+ Y PE + + ++A VWS G++LY ++ G PF + + ++F R
Sbjct: 190 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR--- 246
Query: 260 LRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
+S + L+ L+ PS R T ++ +H WM D
Sbjct: 247 ----------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 79
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKXQKLTDDHVQFLIYQILRG 137
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDXELKILDFGLARHTD--DEMTGYVATRWYRAPE 192
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 253 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 310
Query: 305 IQDPE 309
DP+
Sbjct: 311 YHDPD 315
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 27 ERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 84
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 142
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 143 LKYIHSADIIHRDLKPSNLAV---NEDXELKILDFGLARHTD--DEMTGYVATRWYRAPE 197
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 257
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 258 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 315
Query: 305 IQDPE 309
DP+
Sbjct: 316 YHDPD 320
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 133/284 (46%), Gaps = 44/284 (15%)
Query: 39 LRERFVLGQQLGWGQFGV----IRVCSDKFTGEVFACKSIAKDRLV---TIDDERSVKLE 91
L ++ +G LG G FG IRV SD A K + KDR+ + + V +E
Sbjct: 21 LESQYQVGPLLGSGGFGSVYSGIRV-SDNLP---VAIKHVEKDRISDWGELPNGTRVPME 76
Query: 92 IEIMTRLS-GHPNVVDLKAVYEDEDYVHLVMELCAG-GELFHRLEKFGRFSEAEARVLFM 149
+ ++ ++S G V+ L +E D L++E +LF + + G E AR F
Sbjct: 77 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 136
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTV---- 205
Q+++ V +CH GV+HRD+K ENIL+ + +KL DFG G L TV
Sbjct: 137 QVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFG------SGALLKDTVYTDF 188
Query: 206 -GSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGN---TKSRIFDAVRTAD 259
G+ Y PE + + ++A VWS G++LY ++ G PF + + ++F R
Sbjct: 189 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR--- 245
Query: 260 LRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
+S + L+ L+ PS R T ++ +H WM D
Sbjct: 246 ----------VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 137/305 (44%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 41 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 98
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G + + K + ++ + L Q+++
Sbjct: 99 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 156
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 157 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 211
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 212 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 271
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 272 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 329
Query: 305 IQDPE 309
DP+
Sbjct: 330 YHDPD 334
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 133/284 (46%), Gaps = 44/284 (15%)
Query: 39 LRERFVLGQQLGWGQFGV----IRVCSDKFTGEVFACKSIAKDRLV---TIDDERSVKLE 91
L ++ +G LG G FG IRV SD A K + KDR+ + + V +E
Sbjct: 22 LESQYQVGPLLGSGGFGSVYSGIRV-SDNLP---VAIKHVEKDRISDWGELPNGTRVPME 77
Query: 92 IEIMTRLS-GHPNVVDLKAVYEDEDYVHLVMELCAG-GELFHRLEKFGRFSEAEARVLFM 149
+ ++ ++S G V+ L +E D L++E +LF + + G E AR F
Sbjct: 78 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 137
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTV---- 205
Q+++ V +CH GV+HRD+K ENIL+ + +KL DFG G L TV
Sbjct: 138 QVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFG------SGALLKDTVYTDF 189
Query: 206 -GSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGN---TKSRIFDAVRTAD 259
G+ Y PE + + ++A VWS G++LY ++ G PF + + ++F R
Sbjct: 190 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR--- 246
Query: 260 LRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
+S + L+ L+ PS R T ++ +H WM D
Sbjct: 247 ----------VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 133/284 (46%), Gaps = 44/284 (15%)
Query: 39 LRERFVLGQQLGWGQFGV----IRVCSDKFTGEVFACKSIAKDRLV---TIDDERSVKLE 91
L ++ +G LG G FG IRV SD A K + KDR+ + + V +E
Sbjct: 41 LESQYQVGPLLGSGGFGSVYSGIRV-SDNLP---VAIKHVEKDRISDWGELPNGTRVPME 96
Query: 92 IEIMTRLS-GHPNVVDLKAVYEDEDYVHLVMELCAG-GELFHRLEKFGRFSEAEARVLFM 149
+ ++ ++S G V+ L +E D L++E +LF + + G E AR F
Sbjct: 97 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 156
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTV---- 205
Q+++ V +CH GV+HRD+K ENIL+ + +KL DFG G L TV
Sbjct: 157 QVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFG------SGALLKDTVYTDF 208
Query: 206 -GSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGN---TKSRIFDAVRTAD 259
G+ Y PE + + ++A VWS G++LY ++ G PF + + ++F R
Sbjct: 209 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR--- 265
Query: 260 LRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
+S + L+ L+ PS R T ++ +H WM D
Sbjct: 266 ----------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 299
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 79
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGXVATRWYRAPE 192
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 253 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 310
Query: 305 IQDPE 309
DP+
Sbjct: 311 YHDPD 315
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 141/315 (44%), Gaps = 48/315 (15%)
Query: 8 NSSSEPSRQPCKCYRVRSLAETILDTNQISNLRERFVLGQQLGWGQFGV----IRVCSDK 63
NS + PC LA + L ++ +G LG G FG IRV SD
Sbjct: 7 NSLAHLRAAPCNDLHATKLAPG----KEKEPLESQYQVGPLLGSGGFGSVYSGIRV-SDN 61
Query: 64 FTGEVFACKSIAKDRLV---TIDDERSVKLEIEIMTRLS-GHPNVVDLKAVYEDEDYVHL 119
A K + KDR+ + + V +E+ ++ ++S G V+ L +E D L
Sbjct: 62 LP---VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL 118
Query: 120 VMELCAG-GELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATK 178
++E +LF + + G E AR F Q+++ V +CH GV+HRD+K ENIL+
Sbjct: 119 ILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--D 176
Query: 179 ASSSPIKLADFGLATYIEPGQSLLGTV-----GSPFYIAPEVLAGG--YNQAADVWSAGV 231
+ +KL DFG G L TV G+ Y PE + + ++A VWS G+
Sbjct: 177 LNRGELKLIDFG------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 230
Query: 232 ILYILLSGMPPFWGNTK---SRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQ 288
+LY ++ G PF + + ++F R +S + L+ L+ PS
Sbjct: 231 LLYDMVCGDIPFEHDEEIIGGQVFFRQR-------------VSSECQHLIRWCLALRPSD 277
Query: 289 RLTARQVLDHSWMGD 303
R T ++ +H WM D
Sbjct: 278 RPTFEEIQNHPWMQD 292
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 141/315 (44%), Gaps = 48/315 (15%)
Query: 8 NSSSEPSRQPCKCYRVRSLAETILDTNQISNLRERFVLGQQLGWGQFGV----IRVCSDK 63
NS + PC LA + L ++ +G LG G FG IRV SD
Sbjct: 8 NSLAHLRAAPCNDLHATKLAPG----KEKEPLESQYQVGPLLGSGGFGSVYSGIRV-SDN 62
Query: 64 FTGEVFACKSIAKDRLV---TIDDERSVKLEIEIMTRLS-GHPNVVDLKAVYEDEDYVHL 119
A K + KDR+ + + V +E+ ++ ++S G V+ L +E D L
Sbjct: 63 LP---VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL 119
Query: 120 VMELCAG-GELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATK 178
++E +LF + + G E AR F Q+++ V +CH GV+HRD+K ENIL+
Sbjct: 120 ILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--D 177
Query: 179 ASSSPIKLADFGLATYIEPGQSLLGTV-----GSPFYIAPEVLAGG--YNQAADVWSAGV 231
+ +KL DFG G L TV G+ Y PE + + ++A VWS G+
Sbjct: 178 LNRGELKLIDFG------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 231
Query: 232 ILYILLSGMPPFWGNTK---SRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQ 288
+LY ++ G PF + + ++F R +S + L+ L+ PS
Sbjct: 232 LLYDMVCGDIPFEHDEEIIGGQVFFRQR-------------VSSECQHLIRWCLALRPSD 278
Query: 289 RLTARQVLDHSWMGD 303
R T ++ +H WM D
Sbjct: 279 RPTFEEIQNHPWMQD 293
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 141/315 (44%), Gaps = 48/315 (15%)
Query: 8 NSSSEPSRQPCKCYRVRSLAETILDTNQISNLRERFVLGQQLGWGQFGV----IRVCSDK 63
NS + PC LA + L ++ +G LG G FG IRV SD
Sbjct: 8 NSLAHLRAAPCNDLHATKLAPG----KEKEPLESQYQVGPLLGSGGFGSVYSGIRV-SDN 62
Query: 64 FTGEVFACKSIAKDRLV---TIDDERSVKLEIEIMTRLS-GHPNVVDLKAVYEDEDYVHL 119
A K + KDR+ + + V +E+ ++ ++S G V+ L +E D L
Sbjct: 63 LP---VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL 119
Query: 120 VMELCAG-GELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATK 178
++E +LF + + G E AR F Q+++ V +CH GV+HRD+K ENIL+
Sbjct: 120 ILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--D 177
Query: 179 ASSSPIKLADFGLATYIEPGQSLLGTV-----GSPFYIAPEVLAGG--YNQAADVWSAGV 231
+ +KL DFG G L TV G+ Y PE + + ++A VWS G+
Sbjct: 178 LNRGELKLIDFG------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 231
Query: 232 ILYILLSGMPPFWGNTK---SRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQ 288
+LY ++ G PF + + ++F R +S + L+ L+ PS
Sbjct: 232 LLYDMVCGDIPFEHDEEIIGGQVFFRQR-------------VSSECQHLIRWCLALRPSD 278
Query: 289 RLTARQVLDHSWMGD 303
R T ++ +H WM D
Sbjct: 279 RPTFEEIQNHPWMQD 293
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 79
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKXQKLTDDHVQFLIYQILRG 137
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 192
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 253 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 310
Query: 305 IQDPE 309
DP+
Sbjct: 311 YHDPD 315
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 141/331 (42%), Gaps = 82/331 (24%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+++ LG+ LG G FG++ D +G+ FA K + + D R E++IM L
Sbjct: 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKV-------LQDPRYKNRELDIMKVLD- 58
Query: 101 HPNVVDLKAVYE---DED-----------------------------------YVHLVME 122
H N++ L + DE+ Y++++ME
Sbjct: 59 HVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIME 118
Query: 123 LCAGGELFHR-LEKFGRFSEAEAR----VLFMQLMQVVLYCHEIGVVHRDLKPENILLAT 177
+ H+ L+ F R + + QL + V + H +G+ HRD+KP+N+L+ +
Sbjct: 119 YVP--DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNS 176
Query: 178 KASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGG--YNQAADVWSAGVILYI 235
K ++ +KL DFG A + P + + + S FY APE++ G Y + D+WS G +
Sbjct: 177 KDNT--LKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGE 234
Query: 236 LLSGMPPFWGNTK----SRIFDAVRT-------------ADLRFPS---NPWDHI----- 270
L+ G P F G T RI + T ++RFP+ W I
Sbjct: 235 LILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGT 294
Query: 271 SDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
A DL+ +L +P R+ + + H +
Sbjct: 295 PSLAIDLLEQILRYEPDLRINPYEAMAHPFF 325
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 141/315 (44%), Gaps = 48/315 (15%)
Query: 8 NSSSEPSRQPCKCYRVRSLAETILDTNQISNLRERFVLGQQLGWGQFGV----IRVCSDK 63
NS + PC LA + L ++ +G LG G FG IRV SD
Sbjct: 7 NSLAHLRAAPCNDLHATKLAPG----KEKEPLESQYQVGPLLGSGGFGSVYSGIRV-SDN 61
Query: 64 FTGEVFACKSIAKDRLV---TIDDERSVKLEIEIMTRLS-GHPNVVDLKAVYEDEDYVHL 119
A K + KDR+ + + V +E+ ++ ++S G V+ L +E D L
Sbjct: 62 LP---VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL 118
Query: 120 VMELCAG-GELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATK 178
++E +LF + + G E AR F Q+++ V +CH GV+HRD+K ENIL+
Sbjct: 119 ILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--D 176
Query: 179 ASSSPIKLADFGLATYIEPGQSLLGTV-----GSPFYIAPEVLAGG--YNQAADVWSAGV 231
+ +KL DFG G L TV G+ Y PE + + ++A VWS G+
Sbjct: 177 LNRGELKLIDFG------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 230
Query: 232 ILYILLSGMPPFWGNTK---SRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQ 288
+LY ++ G PF + + ++F R +S + L+ L+ PS
Sbjct: 231 LLYDMVCGDIPFEHDEEIIGGQVFFRQR-------------VSSECQHLIRWCLALRPSD 277
Query: 289 RLTARQVLDHSWMGD 303
R T ++ +H WM D
Sbjct: 278 RPTFEEIQNHPWMQD 292
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 133/284 (46%), Gaps = 44/284 (15%)
Query: 39 LRERFVLGQQLGWGQFGV----IRVCSDKFTGEVFACKSIAKDRLV---TIDDERSVKLE 91
L ++ +G LG G FG IRV SD A K + KDR+ + + V +E
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRV-SDNLP---VAIKHVEKDRISDWGELPNGTRVPME 62
Query: 92 IEIMTRLS-GHPNVVDLKAVYEDEDYVHLVMELCAG-GELFHRLEKFGRFSEAEARVLFM 149
+ ++ ++S G V+ L +E D L++E +LF + + G E AR F
Sbjct: 63 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 122
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTV---- 205
Q+++ V +CH GV+HRD+K ENIL+ + +KL DFG G L TV
Sbjct: 123 QVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFG------SGALLKDTVYTDF 174
Query: 206 -GSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGN---TKSRIFDAVRTAD 259
G+ Y PE + + ++A VWS G++LY ++ G PF + + ++F R
Sbjct: 175 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR--- 231
Query: 260 LRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
+S + L+ L+ PS R T ++ +H WM D
Sbjct: 232 ----------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 81
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 82 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 139
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 194
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 254
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 255 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 312
Query: 305 IQDPE 309
DP+
Sbjct: 313 YHDPD 317
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 81
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 82 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 139
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 194
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 254
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 255 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 312
Query: 305 IQDPE 309
DP+
Sbjct: 313 YHDPD 317
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 137/305 (44%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 42 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 99
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G + + K + ++ + L Q+++
Sbjct: 100 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 157
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 212
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 272
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 273 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 330
Query: 305 IQDPE 309
DP+
Sbjct: 331 YHDPD 335
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 137/305 (44%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 91
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G + + K + ++ + L Q+++
Sbjct: 92 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 149
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 150 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 204
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 264
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 265 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 322
Query: 305 IQDPE 309
DP+
Sbjct: 323 YHDPD 327
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 137/305 (44%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 24 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 81
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G + + K + ++ + L Q+++
Sbjct: 82 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 139
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 194
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 195 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 254
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 255 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 312
Query: 305 IQDPE 309
DP+
Sbjct: 313 YHDPD 317
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 86
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 144
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 199
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 260 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 317
Query: 305 IQDPE 309
DP+
Sbjct: 318 YHDPD 322
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 137/305 (44%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 34 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 91
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G + + K + ++ + L Q+++
Sbjct: 92 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 149
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 150 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 204
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 205 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 264
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 265 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 322
Query: 305 IQDPE 309
DP+
Sbjct: 323 YHDPD 327
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 79
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 192
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 253 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 310
Query: 305 IQDPE 309
DP+
Sbjct: 311 YHDPD 315
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 137/305 (44%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 79
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G + + K + ++ + L Q+++
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKSQKLTDDHVQFLIYQILRG 137
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + S +K+ DFGL + + + G V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAV---NEDSELKILDFGLCRHTD--DEMTGYVATRWYRAPE 192
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 253 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 310
Query: 305 IQDPE 309
DP+
Sbjct: 311 YHDPD 315
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 138/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 86
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 144
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + G V + +Y APE
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHT--ADEMTGYVATRWYRAPE 199
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 260 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 317
Query: 305 IQDPE 309
DP+
Sbjct: 318 YHDPD 322
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 79
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 192
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 253 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 310
Query: 305 IQDPE 309
DP+
Sbjct: 311 YHDPD 315
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 79
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 192
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 253 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 310
Query: 305 IQDPE 309
DP+
Sbjct: 311 YHDPD 315
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 141/315 (44%), Gaps = 48/315 (15%)
Query: 8 NSSSEPSRQPCKCYRVRSLAETILDTNQISNLRERFVLGQQLGWGQFGV----IRVCSDK 63
NS + PC LA + L ++ +G LG G FG IRV SD
Sbjct: 8 NSLAHLRAAPCNDLHATKLAPG----KEKEPLESQYQVGPLLGSGGFGSVYSGIRV-SDN 62
Query: 64 FTGEVFACKSIAKDRLV---TIDDERSVKLEIEIMTRLS-GHPNVVDLKAVYEDEDYVHL 119
A K + KDR+ + + V +E+ ++ ++S G V+ L +E D L
Sbjct: 63 LP---VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL 119
Query: 120 VMELCAG-GELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATK 178
++E +LF + + G E AR F Q+++ V +CH GV+HRD+K ENIL+
Sbjct: 120 ILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--D 177
Query: 179 ASSSPIKLADFGLATYIEPGQSLLGTV-----GSPFYIAPEVLAGG--YNQAADVWSAGV 231
+ +KL DFG G L TV G+ Y PE + + ++A VWS G+
Sbjct: 178 LNRGELKLIDFG------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 231
Query: 232 ILYILLSGMPPFWGNTK---SRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQ 288
+LY ++ G PF + + ++F R +S + L+ L+ PS
Sbjct: 232 LLYDMVCGDIPFEHDEEIIGGQVFFRQR-------------VSXECQHLIRWCLALRPSD 278
Query: 289 RLTARQVLDHSWMGD 303
R T ++ +H WM D
Sbjct: 279 RPTFEEIQNHPWMQD 293
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 137/305 (44%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 90
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G + + K + ++ + L Q+++
Sbjct: 91 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 148
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 149 LKYIHSADIIHRDLKPSNLAV---NEDXELKILDFGLARHTD--DEMTGYVATRWYRAPE 203
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 204 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 263
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 264 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 321
Query: 305 IQDPE 309
DP+
Sbjct: 322 YHDPD 326
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 79
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 192
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 253 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 310
Query: 305 IQDPE 309
DP+
Sbjct: 311 YHDPD 315
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 141/315 (44%), Gaps = 48/315 (15%)
Query: 8 NSSSEPSRQPCKCYRVRSLAETILDTNQISNLRERFVLGQQLGWGQFGV----IRVCSDK 63
NS + PC LA + L ++ +G LG G FG IRV SD
Sbjct: 8 NSLAHLRAAPCNDLHATKLAPG----KEKEPLESQYQVGPLLGSGGFGSVYSGIRV-SDN 62
Query: 64 FTGEVFACKSIAKDRLV---TIDDERSVKLEIEIMTRLS-GHPNVVDLKAVYEDEDYVHL 119
A K + KDR+ + + V +E+ ++ ++S G V+ L +E D L
Sbjct: 63 LP---VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL 119
Query: 120 VMELCAG-GELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATK 178
++E +LF + + G E AR F Q+++ V +CH GV+HRD+K ENIL+
Sbjct: 120 ILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--D 177
Query: 179 ASSSPIKLADFGLATYIEPGQSLLGTV-----GSPFYIAPEVLAGG--YNQAADVWSAGV 231
+ +KL DFG G L TV G+ Y PE + + ++A VWS G+
Sbjct: 178 LNRGELKLIDFG------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 231
Query: 232 ILYILLSGMPPFWGNTK---SRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQ 288
+LY ++ G PF + + ++F R +S + L+ L+ PS
Sbjct: 232 LLYDMVCGDIPFEHDEEIIGGQVFFRQR-------------VSXECQHLIRWCLALRPSD 278
Query: 289 RLTARQVLDHSWMGD 303
R T ++ +H WM D
Sbjct: 279 RPTFEEIQNHPWMQD 293
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 133/284 (46%), Gaps = 44/284 (15%)
Query: 39 LRERFVLGQQLGWGQFGV----IRVCSDKFTGEVFACKSIAKDRLV---TIDDERSVKLE 91
L ++ +G LG G FG IRV SD A K + KDR+ + + V +E
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRV-SDNLP---VAIKHVEKDRISDWGELPNGTRVPME 61
Query: 92 IEIMTRLS-GHPNVVDLKAVYEDEDYVHLVMELCAG-GELFHRLEKFGRFSEAEARVLFM 149
+ ++ ++S G V+ L +E D L++E +LF + + G E AR F
Sbjct: 62 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 121
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTV---- 205
Q+++ V +CH GV+HRD+K ENIL+ + +KL DFG G L TV
Sbjct: 122 QVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFG------SGALLKDTVYTDF 173
Query: 206 -GSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGN---TKSRIFDAVRTAD 259
G+ Y PE + + ++A VWS G++LY ++ G PF + + ++F R
Sbjct: 174 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR--- 230
Query: 260 LRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
+S + L+ L+ PS R T ++ +H WM D
Sbjct: 231 ----------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 84
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 142
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 143 LKYIHSADIIHRDLKPSNLAV---NEDXELKILDFGLARHTD--DEMTGYVATRWYRAPE 197
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 257
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 258 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 315
Query: 305 IQDPE 309
DP+
Sbjct: 316 YHDPD 320
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 79
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 192
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 253 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 310
Query: 305 IQDPE 309
DP+
Sbjct: 311 YHDPD 315
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 20 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 77
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 78 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 135
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 136 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 190
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 191 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 250
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 251 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 308
Query: 305 IQDPE 309
DP+
Sbjct: 309 YHDPD 313
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 138/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 86
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 144
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + G V + +Y APE
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHT--ADEMTGYVATRWYRAPE 199
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 260 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 317
Query: 305 IQDPE 309
DP+
Sbjct: 318 YHDPD 322
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 137/305 (44%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 45 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 102
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G + + K + ++ + L Q+++
Sbjct: 103 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 160
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 161 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 215
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 216 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 275
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 276 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 333
Query: 305 IQDPE 309
DP+
Sbjct: 334 YHDPD 338
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 76
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 77 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 134
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 135 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 189
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 249
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 250 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 307
Query: 305 IQDPE 309
DP+
Sbjct: 308 YHDPD 312
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 84
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 142
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 197
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 257
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 258 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 315
Query: 305 IQDPE 309
DP+
Sbjct: 316 YHDPD 320
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 19 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 76
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 77 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 134
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 135 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 189
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 190 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 249
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 250 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 307
Query: 305 IQDPE 309
DP+
Sbjct: 308 YHDPD 312
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 133/284 (46%), Gaps = 44/284 (15%)
Query: 39 LRERFVLGQQLGWGQFGV----IRVCSDKFTGEVFACKSIAKDRLV---TIDDERSVKLE 91
L ++ +G LG G FG IRV SD A K + KDR+ + + V +E
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRV-SDNLP---VAIKHVEKDRISDWGELPNGTRVPME 62
Query: 92 IEIMTRLS-GHPNVVDLKAVYEDEDYVHLVMELCAG-GELFHRLEKFGRFSEAEARVLFM 149
+ ++ ++S G V+ L +E D L++E +LF + + G E AR F
Sbjct: 63 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 122
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTV---- 205
Q+++ V +CH GV+HRD+K ENIL+ + +KL DFG G L TV
Sbjct: 123 QVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFG------SGALLKDTVYTDF 174
Query: 206 -GSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGN---TKSRIFDAVRTAD 259
G+ Y PE + + ++A VWS G++LY ++ G PF + + ++F R
Sbjct: 175 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR--- 231
Query: 260 LRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
+S + L+ L+ PS R T ++ +H WM D
Sbjct: 232 ----------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 85
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 86 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 143
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 198
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 258
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 259 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 316
Query: 305 IQDPE 309
DP+
Sbjct: 317 YHDPD 321
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 79
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 192
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 253 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 310
Query: 305 IQDPE 309
DP+
Sbjct: 311 YHDPD 315
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 27 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 84
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 85 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 142
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 197
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 198 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 257
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 258 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 315
Query: 305 IQDPE 309
DP+
Sbjct: 316 YHDPD 320
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 21 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 78
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 79 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 136
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 137 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 191
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 192 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 251
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 252 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 309
Query: 305 IQDPE 309
DP+
Sbjct: 310 YHDPD 314
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 79
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 192
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 253 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 310
Query: 305 IQDPE 309
DP+
Sbjct: 311 YHDPD 315
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 137/305 (44%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 33 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 90
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G + + K + ++ + L Q+++
Sbjct: 91 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 148
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 149 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 203
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 204 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 263
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 264 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 321
Query: 305 IQDPE 309
DP+
Sbjct: 322 YHDPD 326
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 141/315 (44%), Gaps = 48/315 (15%)
Query: 8 NSSSEPSRQPCKCYRVRSLAETILDTNQISNLRERFVLGQQLGWGQFGV----IRVCSDK 63
NS + PC LA + L ++ +G LG G FG IRV SD
Sbjct: 7 NSLAHLRAAPCNDLHATKLAPG----KEKEPLESQYQVGPLLGSGGFGSVYSGIRV-SDN 61
Query: 64 FTGEVFACKSIAKDRLV---TIDDERSVKLEIEIMTRLS-GHPNVVDLKAVYEDEDYVHL 119
A K + KDR+ + + V +E+ ++ ++S G V+ L +E D L
Sbjct: 62 LP---VAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVL 118
Query: 120 VMELCAG-GELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATK 178
++E +LF + + G E AR F Q+++ V +CH GV+HRD+K ENIL+
Sbjct: 119 ILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--D 176
Query: 179 ASSSPIKLADFGLATYIEPGQSLLGTV-----GSPFYIAPEVLAGG--YNQAADVWSAGV 231
+ +KL DFG G L TV G+ Y PE + + ++A VWS G+
Sbjct: 177 LNRGELKLIDFG------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGI 230
Query: 232 ILYILLSGMPPFWGNTK---SRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQ 288
+LY ++ G PF + + ++F R +S + L+ L+ PS
Sbjct: 231 LLYDMVCGDIPFEHDEEIIGGQVFFRQR-------------VSXECQHLIRWCLALRPSD 277
Query: 289 RLTARQVLDHSWMGD 303
R T ++ +H WM D
Sbjct: 278 RPTFEEIQNHPWMQD 292
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 133/284 (46%), Gaps = 44/284 (15%)
Query: 39 LRERFVLGQQLGWGQFGV----IRVCSDKFTGEVFACKSIAKDRLV---TIDDERSVKLE 91
L ++ +G LG G FG IRV SD A K + KDR+ + + V +E
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRV-SDNLP---VAIKHVEKDRISDWGELPNGTRVPME 62
Query: 92 IEIMTRLS-GHPNVVDLKAVYEDEDYVHLVMELCAG-GELFHRLEKFGRFSEAEARVLFM 149
+ ++ ++S G V+ L +E D L++E +LF + + G E AR F
Sbjct: 63 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 122
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTV---- 205
Q+++ V +CH GV+HRD+K ENIL+ + +KL DFG G L TV
Sbjct: 123 QVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFG------SGALLKDTVYTDF 174
Query: 206 -GSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGN---TKSRIFDAVRTAD 259
G+ Y PE + + ++A VWS G++LY ++ G PF + + ++F R
Sbjct: 175 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR--- 231
Query: 260 LRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
+S + L+ L+ PS R T ++ +H WM D
Sbjct: 232 ----------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 124/261 (47%), Gaps = 26/261 (9%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI-MTRLSGHPNVVDL 107
LG G +G++ D A K I + D S L EI + + H N+V
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPER-----DSRYSQPLHEEIALHKHLKHKNIVQY 70
Query: 108 KAVYEDEDYVHLVMELCAGGELFHRLE-KFGRFSEAEARVLFM--QLMQVVLYCHEIGVV 164
+ + ++ + ME GG L L K+G + E + F Q+++ + Y H+ +V
Sbjct: 71 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV 130
Query: 165 HRDLKPENILLATKASSSPIKLADFGLATY---IEP-GQSLLGTVGSPFYIAPEVLAGG- 219
HRD+K +N+L+ T S +K++DFG + I P ++ GT+ Y+APE++ G
Sbjct: 131 HRDIKGDNVLINT--YSGVLKISDFGTSKRLAGINPCTETFTGTLQ---YMAPEIIDKGP 185
Query: 220 --YNQAADVWSAGVILYILLSGMPPFW--GNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
Y +AAD+WS G + + +G PPF+ G ++ +F + + + +S AK
Sbjct: 186 RGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMF---KVGMFKVHPEIPESMSAEAK 242
Query: 276 DLVMGMLSTDPSQRLTARQVL 296
++ DP +R A +L
Sbjct: 243 AFILKCFEPDPDKRACANDLL 263
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 138/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 86
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 87 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 144
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + G V + +Y APE
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHT--ADEMTGYVATRWYRAPE 199
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 200 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 259
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 260 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 317
Query: 305 IQDPE 309
DP+
Sbjct: 318 YHDPD 322
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 128/264 (48%), Gaps = 17/264 (6%)
Query: 37 SNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMT 96
S+L +R+ LG+ LG+G + + D A K + D + D ++ E
Sbjct: 8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRAD--LARDPSFYLRFRREAQN 65
Query: 97 RLS-GHPNVVDLKAVYEDEDYV----HLVMELCAGGELFHRLEKFGRFSEAEARVLFMQL 151
+ HP +V + E E ++VME G L + G + A +
Sbjct: 66 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA 125
Query: 152 MQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYI-EPGQSLLGT---VGS 207
Q + + H+ G++HRD+KP NIL+ ++++ +K+ DFG+A I + G S+ T +G+
Sbjct: 126 CQALNFSHQNGIIHRDVKPANILI---SATNAVKVVDFGIARAIADSGNSVXQTAAVIGT 182
Query: 208 PFYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGNTK-SRIFDAVRTADLRFPSN 265
Y++PE G + +DV+S G +LY +L+G PPF G++ S + VR D PS
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE-DPIPPSA 241
Query: 266 PWDHISDSAKDLVMGMLSTDPSQR 289
+ +S +V+ L+ +P R
Sbjct: 242 RHEGLSADLDAVVLKALAKNPENR 265
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 28 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 85
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 86 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 143
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 198
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 199 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 258
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 259 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 316
Query: 305 IQDPE 309
DP+
Sbjct: 317 YHDPD 321
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 139/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 75
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 76 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 133
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 188
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 248
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 249 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 306
Query: 305 IQDPE 309
DP+
Sbjct: 307 YHDPD 311
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 133/284 (46%), Gaps = 44/284 (15%)
Query: 39 LRERFVLGQQLGWGQFGV----IRVCSDKFTGEVFACKSIAKDRLV---TIDDERSVKLE 91
L ++ +G LG G FG IRV SD A K + KDR+ + + V +E
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRV-SDNLP---VAIKHVEKDRISDWGELPNGTRVPME 57
Query: 92 IEIMTRLS-GHPNVVDLKAVYEDEDYVHLVMELCAG-GELFHRLEKFGRFSEAEARVLFM 149
+ ++ ++S G V+ L +E D L++E +LF + + G E AR F
Sbjct: 58 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 117
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTV---- 205
Q+++ V +CH GV+HRD+K ENIL+ + +KL DFG G L TV
Sbjct: 118 QVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFG------SGALLKDTVYTDF 169
Query: 206 -GSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGN---TKSRIFDAVRTAD 259
G+ Y PE + + ++A VWS G++LY ++ G PF + + ++F R
Sbjct: 170 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR--- 226
Query: 260 LRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
+S + L+ L+ PS R T ++ +H WM D
Sbjct: 227 ----------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 133/284 (46%), Gaps = 44/284 (15%)
Query: 39 LRERFVLGQQLGWGQFGV----IRVCSDKFTGEVFACKSIAKDRLV---TIDDERSVKLE 91
L ++ +G LG G FG IRV SD A K + KDR+ + + V +E
Sbjct: 5 LESQYQVGPLLGSGGFGSVYSGIRV-SDNLP---VAIKHVEKDRISDWGELPNGTRVPME 60
Query: 92 IEIMTRLS-GHPNVVDLKAVYEDEDYVHLVMELCAG-GELFHRLEKFGRFSEAEARVLFM 149
+ ++ ++S G V+ L +E D L++E +LF + + G E AR F
Sbjct: 61 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 120
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTV---- 205
Q+++ V +CH GV+HRD+K ENIL+ + +KL DFG G L TV
Sbjct: 121 QVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFG------SGALLKDTVYTDF 172
Query: 206 -GSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGN---TKSRIFDAVRTAD 259
G+ Y PE + + ++A VWS G++LY ++ G PF + + ++F R
Sbjct: 173 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR--- 229
Query: 260 LRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
+S + L+ L+ PS R T ++ +H WM D
Sbjct: 230 ----------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 263
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 133/284 (46%), Gaps = 44/284 (15%)
Query: 39 LRERFVLGQQLGWGQFGV----IRVCSDKFTGEVFACKSIAKDRLV---TIDDERSVKLE 91
L ++ +G LG G FG IRV SD A K + KDR+ + + V +E
Sbjct: 29 LESQYQVGPLLGSGGFGSVYSGIRV-SDNLP---VAIKHVEKDRISDWGELPNGTRVPME 84
Query: 92 IEIMTRLS-GHPNVVDLKAVYEDEDYVHLVMELCAG-GELFHRLEKFGRFSEAEARVLFM 149
+ ++ ++S G V+ L +E D L++E +LF + + G E AR F
Sbjct: 85 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 144
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTV---- 205
Q+++ V +CH GV+HRD+K ENIL+ + +KL DFG G L TV
Sbjct: 145 QVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFG------SGALLKDTVYTDF 196
Query: 206 -GSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGN---TKSRIFDAVRTAD 259
G+ Y PE + + ++A VWS G++LY ++ G PF + + ++F R
Sbjct: 197 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR--- 253
Query: 260 LRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
+S + L+ L+ PS R T ++ +H WM D
Sbjct: 254 ----------VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 287
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 128/264 (48%), Gaps = 17/264 (6%)
Query: 37 SNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMT 96
S+L +R+ LG+ LG+G + + D A K + D + D ++ E
Sbjct: 8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRAD--LARDPSFYLRFRREAQN 65
Query: 97 RLS-GHPNVVDLKAVYEDEDYV----HLVMELCAGGELFHRLEKFGRFSEAEARVLFMQL 151
+ HP +V + E E ++VME G L + G + A +
Sbjct: 66 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA 125
Query: 152 MQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYI-EPGQSLLGT---VGS 207
Q + + H+ G++HRD+KP NI++ ++++ +K+ DFG+A I + G S+ T +G+
Sbjct: 126 CQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
Query: 208 PFYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGNTKSRI-FDAVRTADLRFPSN 265
Y++PE G + +DV+S G +LY +L+G PPF G++ + + VR D PS
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVRE-DPIPPSA 241
Query: 266 PWDHISDSAKDLVMGMLSTDPSQR 289
+ +S +V+ L+ +P R
Sbjct: 242 RHEGLSADLDAVVLKALAKNPENR 265
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 122/259 (47%), Gaps = 20/259 (7%)
Query: 40 RERFVLGQQLGWGQFGVIR---VCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMT 96
RER LG+ +G GQFG + S + A K+ T D R L+ +
Sbjct: 9 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN---CTSDSVREKFLQEALTM 65
Query: 97 RLSGHPNVVDLKAVYEDEDYVHLVMELCAGGEL--FHRLEKFGRFSEAEARVLFMQLMQV 154
R HP++V L V E+ V ++MELC GEL F ++ KF A + QL
Sbjct: 66 RQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTA 123
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGS-PF-YIA 212
+ Y VHRD+ N+L++ S+ +KL DFGL+ Y+E + G P ++A
Sbjct: 124 LAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMA 180
Query: 213 PEVLA-GGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHI 270
PE + + A+DVW GV ++ IL+ G+ PF G + + + + R P P +
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP--NC 237
Query: 271 SDSAKDLVMGMLSTDPSQR 289
+ L+ + DPS+R
Sbjct: 238 PPTLYSLMTKCWAYDPSRR 256
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 133/284 (46%), Gaps = 44/284 (15%)
Query: 39 LRERFVLGQQLGWGQFGV----IRVCSDKFTGEVFACKSIAKDRLV---TIDDERSVKLE 91
L ++ +G LG G FG IRV SD A K + KDR+ + + V +E
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRV-SDNLP---VAIKHVEKDRISDWGELPNGTRVPME 57
Query: 92 IEIMTRLS-GHPNVVDLKAVYEDEDYVHLVMELCAG-GELFHRLEKFGRFSEAEARVLFM 149
+ ++ ++S G V+ L +E D L++E +LF + + G E AR F
Sbjct: 58 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 117
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTV---- 205
Q+++ V +CH GV+HRD+K ENIL+ + +KL DFG G L TV
Sbjct: 118 QVLEAVRHCHNXGVLHRDIKDENILI--DLNRGELKLIDFG------SGALLKDTVYTDF 169
Query: 206 -GSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGN---TKSRIFDAVRTAD 259
G+ Y PE + + ++A VWS G++LY ++ G PF + + ++F R
Sbjct: 170 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR--- 226
Query: 260 LRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
+S + L+ L+ PS R T ++ +H WM D
Sbjct: 227 ----------VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 135/306 (44%), Gaps = 46/306 (15%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
Q+ ++ R+ +G G +G++ D A K I+ T +R+++ EI+I
Sbjct: 19 QVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYC-QRTLR-EIKI 76
Query: 95 MTRLSGHPNVVDLKAVY-----EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM 149
+ H N++ + + E V++V +L ++L K S
Sbjct: 77 LLAFR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLLKTQHLSNDHICYFLY 133
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLG----TV 205
Q+++ + Y H V+HRDLKP N+LL T + +K+ DFGLA +P G V
Sbjct: 134 QILRGLKYIHSANVLHRDLKPSNLLLNT---TCDLKICDFGLARVADPDHDHTGFLTEYV 190
Query: 206 GSPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAV-------- 255
+ +Y APE++ + GY ++ D+WS G IL +LS P F G + +
Sbjct: 191 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS 250
Query: 256 ------------RTADLRFPSN---PWDHI---SDS-AKDLVMGMLSTDPSQRLTARQVL 296
R L P PW+ + +DS A DL+ ML+ +P +R+ Q L
Sbjct: 251 QEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQAL 310
Query: 297 DHSWMG 302
H ++
Sbjct: 311 AHPYLA 316
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 132/284 (46%), Gaps = 44/284 (15%)
Query: 39 LRERFVLGQQLGWGQFGV----IRVCSDKFTGEVFACKSIAKDRLV---TIDDERSVKLE 91
L ++ +G LG G FG IRV SD A K + KDR+ + + V +E
Sbjct: 22 LESQYQVGPLLGSGGFGSVYSGIRV-SDNLP---VAIKHVEKDRISDWGELPNGTRVPME 77
Query: 92 IEIMTRLS-GHPNVVDLKAVYEDEDYVHLVMELCAG-GELFHRLEKFGRFSEAEARVLFM 149
+ ++ ++S G V+ L +E D L++E +LF + + G E AR F
Sbjct: 78 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 137
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTV---- 205
Q+++ V +CH GV+HRD+K ENIL+ + +KL DFG G L TV
Sbjct: 138 QVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFG------SGALLKDTVYTDF 189
Query: 206 -GSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGN---TKSRIFDAVRTAD 259
G+ Y PE + + ++A VWS G++LY ++ G PF + + ++F R
Sbjct: 190 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQR--- 246
Query: 260 LRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
+S + L+ L+ P R T ++ +H WM D
Sbjct: 247 ----------VSXECQHLIRWCLALRPXDRPTFEEIQNHPWMQD 280
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 139/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 79
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ D+GLA + + + G V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDYGLARHTD--DEMTGYVATRWYRAPE 192
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 253 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 310
Query: 305 IQDPE 309
DP+
Sbjct: 311 YHDPD 315
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 128/264 (48%), Gaps = 17/264 (6%)
Query: 37 SNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMT 96
S+L +R+ LG+ LG+G + + D A K + D + D ++ E
Sbjct: 8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRAD--LARDPSFYLRFRREAQN 65
Query: 97 RLS-GHPNVVDLKAVYEDEDYV----HLVMELCAGGELFHRLEKFGRFSEAEARVLFMQL 151
+ HP +V + E E ++VME G L + G + A +
Sbjct: 66 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA 125
Query: 152 MQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYI-EPGQSLLGT---VGS 207
Q + + H+ G++HRD+KP NI++ ++++ +K+ DFG+A I + G S+ T +G+
Sbjct: 126 CQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
Query: 208 PFYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGNTK-SRIFDAVRTADLRFPSN 265
Y++PE G + +DV+S G +LY +L+G PPF G++ S + VR D PS
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE-DPIPPSA 241
Query: 266 PWDHISDSAKDLVMGMLSTDPSQR 289
+ +S +V+ L+ +P R
Sbjct: 242 RHEGLSADLDAVVLKALAKNPENR 265
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 133/284 (46%), Gaps = 44/284 (15%)
Query: 39 LRERFVLGQQLGWGQFGV----IRVCSDKFTGEVFACKSIAKDRLV---TIDDERSVKLE 91
L ++ +G LG G FG IRV SD A K + KDR+ + + V +E
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRV-SDNLP---VAIKHVEKDRISDWGELPNGTRVPME 57
Query: 92 IEIMTRLS-GHPNVVDLKAVYEDEDYVHLVMELCAG-GELFHRLEKFGRFSEAEARVLFM 149
+ ++ ++S G V+ L +E D L++E +LF + + G E AR F
Sbjct: 58 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFW 117
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTV---- 205
Q+++ V +CH GV+HRD+K ENIL+ + +KL DFG G L TV
Sbjct: 118 QVLEAVRHCHNCGVLHRDIKDENILI--DLNRGELKLIDFG------SGALLKDTVYTDF 169
Query: 206 -GSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGNTK---SRIFDAVRTAD 259
G+ Y PE + + ++A VWS G++LY ++ G PF + + ++F R
Sbjct: 170 DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQR--- 226
Query: 260 LRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
+S + L+ L+ PS R T ++ +H WM D
Sbjct: 227 ----------VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 128/264 (48%), Gaps = 17/264 (6%)
Query: 37 SNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMT 96
S+L +R+ LG+ LG+G + + D A K + D + D ++ E
Sbjct: 8 SHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRAD--LARDPSFYLRFRREAQN 65
Query: 97 RLS-GHPNVVDLKAVYEDEDYV----HLVMELCAGGELFHRLEKFGRFSEAEARVLFMQL 151
+ HP +V + E E ++VME G L + G + A +
Sbjct: 66 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA 125
Query: 152 MQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYI-EPGQSLLGT---VGS 207
Q + + H+ G++HRD+KP NI++ ++++ +K+ DFG+A I + G S+ T +G+
Sbjct: 126 CQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
Query: 208 PFYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGNTK-SRIFDAVRTADLRFPSN 265
Y++PE G + +DV+S G +LY +L+G PPF G++ S + VR D PS
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE-DPIPPSA 241
Query: 266 PWDHISDSAKDLVMGMLSTDPSQR 289
+ +S +V+ L+ +P R
Sbjct: 242 RHEGLSADLDAVVLKALAKNPENR 265
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 113/253 (44%), Gaps = 17/253 (6%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDL 107
+LG G +G + K G ++A K D R + E+ ++ HP V L
Sbjct: 64 RLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLA-EVGSHEKVGQHPCCVRL 122
Query: 108 KAVYEDEDYVHLVMELCAGGELFHRLEKFG-RFSEAEARVLFMQLMQVVLYCHEIGVVHR 166
+ +E+ ++L ELC G L E +G EA+ + + + H G+VH
Sbjct: 123 EQAWEEGGILYLQTELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHL 181
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTV--GSPFYIAPEVLAGGYNQAA 224
D+KP NI L + KL DFGL +E G + G V G P Y+APE+L G Y AA
Sbjct: 182 DVKPANIFLGPRGR---CKLGDFGL--LVELGTAGAGEVQEGDPRYMAPELLQGSYGTAA 236
Query: 225 DVWSAGV-ILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLS 283
DV+S G+ IL + + P G ++ P +S + +++ ML
Sbjct: 237 DVFSLGLTILEVACNMELPHGGEGWQQLRQGY------LPPEFTAGLSSELRSVLVMMLE 290
Query: 284 TDPSQRLTARQVL 296
DP R TA +L
Sbjct: 291 PDPKLRATAEALL 303
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 122/259 (47%), Gaps = 20/259 (7%)
Query: 40 RERFVLGQQLGWGQFGVIR---VCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMT 96
RER LG+ +G GQFG + S + A K+ T D R L+ +
Sbjct: 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN---CTSDSVREKFLQEALTM 445
Query: 97 RLSGHPNVVDLKAVYEDEDYVHLVMELCAGGEL--FHRLEKFGRFSEAEARVLFMQLMQV 154
R HP++V L V E+ V ++MELC GEL F ++ KF A + QL
Sbjct: 446 RQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTA 503
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGS-PF-YIA 212
+ Y VHRD+ N+L+ +S+ +KL DFGL+ Y+E + G P ++A
Sbjct: 504 LAYLESKRFVHRDIAARNVLV---SSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 560
Query: 213 PEVLA-GGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHI 270
PE + + A+DVW GV ++ IL+ G+ PF G + + + + R P P +
Sbjct: 561 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP--NC 617
Query: 271 SDSAKDLVMGMLSTDPSQR 289
+ L+ + DPS+R
Sbjct: 618 PPTLYSLMTKCWAYDPSRR 636
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 122/259 (47%), Gaps = 20/259 (7%)
Query: 40 RERFVLGQQLGWGQFGVIR---VCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMT 96
RER LG+ +G GQFG + S + A K+ T D R L+ +
Sbjct: 9 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN---CTSDSVREKFLQEALTM 65
Query: 97 RLSGHPNVVDLKAVYEDEDYVHLVMELCAGGEL--FHRLEKFGRFSEAEARVLFMQLMQV 154
R HP++V L V E+ V ++MELC GEL F ++ KF A + QL
Sbjct: 66 RQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTA 123
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGS-PF-YIA 212
+ Y VHRD+ N+L+ +++ +KL DFGL+ Y+E + G P ++A
Sbjct: 124 LAYLESKRFVHRDIAARNVLV---SATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 180
Query: 213 PEVLA-GGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHI 270
PE + + A+DVW GV ++ IL+ G+ PF G + + + + R P P +
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP--NC 237
Query: 271 SDSAKDLVMGMLSTDPSQR 289
+ L+ + DPS+R
Sbjct: 238 PPTLYSLMTKCWAYDPSRR 256
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 138/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 79
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DF LA + + + G V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFYLARHTD--DEMTGYVATRWYRAPE 192
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 253 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 310
Query: 305 IQDPE 309
DP+
Sbjct: 311 YHDPD 315
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 131/260 (50%), Gaps = 27/260 (10%)
Query: 47 QQLGWGQFGVI---RVCSDKFTGEVFACKSI----AKDRLVTIDDERSVKLEIEIMTRLS 99
+Q+G G FG++ R+ DK V A KS+ ++ I+ + + E+ IM+ L+
Sbjct: 25 KQIGKGGFGLVHKGRLVKDK---SVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRL-EKFGRFSEAEARVLFMQLMQVVLYC 158
HPN+V L + + +VME G+L+HRL +K + L + + + Y
Sbjct: 82 -HPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYM 138
Query: 159 HEIG--VVHRDLKPENILLATKASSSPI--KLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+VHRDL+ NI L + ++P+ K+ADFGL+ + S+ G +G+ ++APE
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ--QSVHSVSGLLGNFQWMAPE 196
Query: 215 VLAG---GYNQAADVWSAGVILYILLSGMPPF--WGNTKSRIFDAVRTADLRFPSNPWDH 269
+ Y + AD +S +ILY +L+G PF + K + + +R LR P+ P D
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR-PTIPED- 254
Query: 270 ISDSAKDLVMGMLSTDPSQR 289
++++ S DP +R
Sbjct: 255 CPPRLRNVIELCWSGDPKKR 274
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 128/264 (48%), Gaps = 17/264 (6%)
Query: 37 SNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMT 96
S+L +R+ LG+ LG+G + + D A K + D + D ++ E
Sbjct: 25 SHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRAD--LARDPSFYLRFRREAQN 82
Query: 97 RLS-GHPNVVDLKAVYEDEDYV----HLVMELCAGGELFHRLEKFGRFSEAEARVLFMQL 151
+ HP +V + E E ++VME G L + G + A +
Sbjct: 83 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADA 142
Query: 152 MQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYI-EPGQSLLGT---VGS 207
Q + + H+ G++HRD+KP NI++ ++++ +K+ DFG+A I + G S+ T +G+
Sbjct: 143 CQALNFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 199
Query: 208 PFYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGNTKSRI-FDAVRTADLRFPSN 265
Y++PE G + +DV+S G +LY +L+G PPF G++ + + VR D PS
Sbjct: 200 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE-DPIPPSA 258
Query: 266 PWDHISDSAKDLVMGMLSTDPSQR 289
+ +S +V+ L+ +P R
Sbjct: 259 RHEGLSADLDAVVLKALAKNPENR 282
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 122/259 (47%), Gaps = 20/259 (7%)
Query: 40 RERFVLGQQLGWGQFGVIR---VCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMT 96
RER LG+ +G GQFG + S + A K+ T D R L+ +
Sbjct: 9 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN---CTSDSVREKFLQEALTM 65
Query: 97 RLSGHPNVVDLKAVYEDEDYVHLVMELCAGGEL--FHRLEKFGRFSEAEARVLFMQLMQV 154
R HP++V L V E+ V ++MELC GEL F ++ K+ A + QL
Sbjct: 66 RQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTA 123
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGS-PF-YIA 212
+ Y VHRD+ N+L++ S+ +KL DFGL+ Y+E + G P ++A
Sbjct: 124 LAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 180
Query: 213 PEVLA-GGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHI 270
PE + + A+DVW GV ++ IL+ G+ PF G + + + + R P P +
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP--NC 237
Query: 271 SDSAKDLVMGMLSTDPSQR 289
+ L+ + DPS+R
Sbjct: 238 PPTLYSLMTKCWAYDPSRR 256
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 138/304 (45%), Gaps = 45/304 (14%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D +G A K +++ I +R+ + E+ ++ +
Sbjct: 51 ERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 108
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 109 HENVIGLLDVFTPATSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 166
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ DFGLA + + + G V + +Y APE
Sbjct: 167 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDFGLARHTD--DEMTGYVATRWYRAPE 221
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG----NTKSRIFDAVRTADL----RFPS 264
++ YN D+WS G I+ LL+G F G N +I T R PS
Sbjct: 222 IMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMPS 281
Query: 265 N------------PWDHISDS-------AKDLVMGMLSTDPSQRLTARQVLDHSWMGDGI 305
+ P + +D A DL+ ML D +R+TA + L H +
Sbjct: 282 HEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQ-Y 340
Query: 306 QDPE 309
DP+
Sbjct: 341 HDPD 344
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 120/256 (46%), Gaps = 14/256 (5%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
RER LG+ +G GQFG + +I + T D R L+ + R
Sbjct: 37 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 96
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGEL--FHRLEKFGRFSEAEARVLFMQLMQVVLY 157
HP++V L V E+ V ++MELC GEL F ++ K+ A + QL + Y
Sbjct: 97 DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAY 154
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGS-PF-YIAPEV 215
VHRD+ N+L++ S+ +KL DFGL+ Y+E + G P ++APE
Sbjct: 155 LESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 211
Query: 216 LA-GGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDS 273
+ + A+DVW GV ++ IL+ G+ PF G + + + + R P P + +
Sbjct: 212 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP--NCPPT 268
Query: 274 AKDLVMGMLSTDPSQR 289
L+ + DPS+R
Sbjct: 269 LYSLMTKCWAYDPSRR 284
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 120/256 (46%), Gaps = 14/256 (5%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
RER LG+ +G GQFG + +I + T D R L+ + R
Sbjct: 12 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 71
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGEL--FHRLEKFGRFSEAEARVLFMQLMQVVLY 157
HP++V L V E+ V ++MELC GEL F ++ K+ A + QL + Y
Sbjct: 72 DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAY 129
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGS-PF-YIAPEV 215
VHRD+ N+L++ S+ +KL DFGL+ Y+E + G P ++APE
Sbjct: 130 LESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 186
Query: 216 LA-GGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDS 273
+ + A+DVW GV ++ IL+ G+ PF G + + + + R P P + +
Sbjct: 187 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP--NCPPT 243
Query: 274 AKDLVMGMLSTDPSQR 289
L+ + DPS+R
Sbjct: 244 LYSLMTKCWAYDPSRR 259
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 122/259 (47%), Gaps = 20/259 (7%)
Query: 40 RERFVLGQQLGWGQFGVIR---VCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMT 96
RER LG+ +G GQFG + S + A K+ T D R L+ +
Sbjct: 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN---CTSDSVREKFLQEALTM 445
Query: 97 RLSGHPNVVDLKAVYEDEDYVHLVMELCAGGEL--FHRLEKFGRFSEAEARVLFMQLMQV 154
R HP++V L V E+ V ++MELC GEL F ++ KF A + QL
Sbjct: 446 RQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKFS-LDLASLILYAYQLSTA 503
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGS-PF-YIA 212
+ Y VHRD+ N+L+ +++ +KL DFGL+ Y+E + G P ++A
Sbjct: 504 LAYLESKRFVHRDIAARNVLV---SATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 560
Query: 213 PEVLA-GGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHI 270
PE + + A+DVW GV ++ IL+ G+ PF G + + + + R P P +
Sbjct: 561 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP--NC 617
Query: 271 SDSAKDLVMGMLSTDPSQR 289
+ L+ + DPS+R
Sbjct: 618 PPTLYSLMTKCWAYDPSRR 636
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 120/256 (46%), Gaps = 14/256 (5%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
RER LG+ +G GQFG + +I + T D R L+ + R
Sbjct: 11 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 70
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGEL--FHRLEKFGRFSEAEARVLFMQLMQVVLY 157
HP++V L V E+ V ++MELC GEL F ++ K+ A + QL + Y
Sbjct: 71 DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAY 128
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGS-PF-YIAPEV 215
VHRD+ N+L++ S+ +KL DFGL+ Y+E + G P ++APE
Sbjct: 129 LESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 185
Query: 216 LA-GGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDS 273
+ + A+DVW GV ++ IL+ G+ PF G + + + + R P P + +
Sbjct: 186 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP--NCPPT 242
Query: 274 AKDLVMGMLSTDPSQR 289
L+ + DPS+R
Sbjct: 243 LYSLMTKCWAYDPSRR 258
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 120/256 (46%), Gaps = 14/256 (5%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
RER LG+ +G GQFG + +I + T D R L+ + R
Sbjct: 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 73
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGEL--FHRLEKFGRFSEAEARVLFMQLMQVVLY 157
HP++V L V E+ V ++MELC GEL F ++ K+ A + QL + Y
Sbjct: 74 DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAY 131
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGS-PF-YIAPEV 215
VHRD+ N+L++ S+ +KL DFGL+ Y+E + G P ++APE
Sbjct: 132 LESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 188
Query: 216 LA-GGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDS 273
+ + A+DVW GV ++ IL+ G+ PF G + + + + R P P + +
Sbjct: 189 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP--NCPPT 245
Query: 274 AKDLVMGMLSTDPSQR 289
L+ + DPS+R
Sbjct: 246 LYSLMTKCWAYDPSRR 261
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 120/256 (46%), Gaps = 14/256 (5%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
RER LG+ +G GQFG + +I + T D R L+ + R
Sbjct: 6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF 65
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGEL--FHRLEKFGRFSEAEARVLFMQLMQVVLY 157
HP++V L V E+ V ++MELC GEL F ++ K+ A + QL + Y
Sbjct: 66 DHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTALAY 123
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGS-PF-YIAPEV 215
VHRD+ N+L++ S+ +KL DFGL+ Y+E + G P ++APE
Sbjct: 124 LESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPES 180
Query: 216 LA-GGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDS 273
+ + A+DVW GV ++ IL+ G+ PF G + + + + R P P + +
Sbjct: 181 INFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP--NCPPT 237
Query: 274 AKDLVMGMLSTDPSQR 289
L+ + DPS+R
Sbjct: 238 LYSLMTKCWAYDPSRR 253
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 122/259 (47%), Gaps = 20/259 (7%)
Query: 40 RERFVLGQQLGWGQFGVIR---VCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMT 96
RER LG+ +G GQFG + S + A K+ T D R L+ +
Sbjct: 9 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN---CTSDSVREKFLQEALTM 65
Query: 97 RLSGHPNVVDLKAVYEDEDYVHLVMELCAGGEL--FHRLEKFGRFSEAEARVLFMQLMQV 154
R HP++V L V E+ V ++MELC GEL F ++ K+ A + QL
Sbjct: 66 RQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYS-LDLASLILYAYQLSTA 123
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGS-PF-YIA 212
+ Y VHRD+ N+L++ S+ +KL DFGL+ Y+E + G P ++A
Sbjct: 124 LAYLESKRFVHRDIAARNVLVS---SNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMA 180
Query: 213 PEVLA-GGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHI 270
PE + + A+DVW GV ++ IL+ G+ PF G + + + + R P P +
Sbjct: 181 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE-RLPMPP--NC 237
Query: 271 SDSAKDLVMGMLSTDPSQR 289
+ L+ + DPS+R
Sbjct: 238 PPTLYSLMTKCWAYDPSRR 256
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 138/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 79
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ FGLA + + + G V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILGFGLARHTD--DEMTGYVATRWYRAPE 192
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 253 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 310
Query: 305 IQDPE 309
DP+
Sbjct: 311 YHDPD 315
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 137/310 (44%), Gaps = 52/310 (16%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDD-ERSVKLEIEIMTRLSGHPN-- 103
+ L G+F I +C + +A K K L D +S +I I ++ N
Sbjct: 37 RTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNEL 94
Query: 104 --VVDLKAVY--------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQ 153
+ D+K Y + D V+++ E + E F + + +Q+++
Sbjct: 95 QIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIK 154
Query: 154 VVL--------YCH-EIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT 204
++ Y H E + HRD+KP NIL+ + +KL+DFG + Y+ + + G+
Sbjct: 155 CIIKSVLNSFSYIHNEKNICHRDVKPSNILMD---KNGRVKLSDFGESEYM-VDKKIKGS 210
Query: 205 VGSPFYIAPEVLAG--GYNQA-ADVWSAGVILYILLSGMPPF-WGNTKSRIFDAVRTADL 260
G+ ++ PE + YN A D+WS G+ LY++ + PF + +F+ +RT ++
Sbjct: 211 RGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNI 270
Query: 261 RFP-----------------SNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
+P SN + +S+ D + L +P++R+T+ L H W+ D
Sbjct: 271 EYPLDRNHFLYPLTNKKSTCSNNF--LSNEDIDFLKLFLRKNPAERITSEDALKHEWLAD 328
Query: 304 -GIQDPEKLS 312
I+D + S
Sbjct: 329 TNIEDLREFS 338
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 133/297 (44%), Gaps = 50/297 (16%)
Query: 39 LRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRL 98
L+ V + LG+G G + V F G A K + ID +EI+++T
Sbjct: 13 LKNLVVSEKILGYGSSGTV-VFQGSFQGRPVAVKRML------IDFCDIALMEIKLLTES 65
Query: 99 SGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARV--------LFMQ 150
HPNV+ + ++++ +ELC L + S+ ++ L Q
Sbjct: 66 DDHPNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQ 123
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLATK----------ASSSPIKLADFGLATYIEPGQS 200
+ V + H + ++HRDLKP+NIL++T A + I ++DFGL ++ GQS
Sbjct: 124 IASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQS 183
Query: 201 LLGT-----VGSPFYIAPEVLAGGYN--------QAADVWSAGVILYILLS-GMPPFWGN 246
T G+ + APE+L N ++ D++S G + Y +LS G PF G+
Sbjct: 184 SFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF-GD 242
Query: 247 TKSRIFDAVRTADLRFPSNPWDHISD-----SAKDLVMGMLSTDPSQRLTARQVLDH 298
SR + +R F + + D A DL+ M+ DP +R TA +VL H
Sbjct: 243 KYSRESNIIRGI---FSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 138/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 79
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ D GLA + + + G V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDAGLARHTD--DEMTGYVATRWYRAPE 192
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 253 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 310
Query: 305 IQDPE 309
DP+
Sbjct: 311 YHDPD 315
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 128/279 (45%), Gaps = 35/279 (12%)
Query: 44 VLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL--VTIDDERSVKLEIEIMTRLSGH 101
+L Q G V +V ++K +++A K + + T+D R+ EI + +L H
Sbjct: 60 ILKQIGSGGSSKVFQVLNEK--KQIYAIKYVNLEEADNQTLDSYRN---EIAYLNKLQQH 114
Query: 102 PNVVDLKAVYEDED-YVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
+ + YE D Y+++VME C +L L+K E + + +++ V H+
Sbjct: 115 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 173
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLL---GTVGSPFYIAPEVLA 217
G+VH DLKP N L+ +KL DFG+A ++P + + VG+ Y+ PE +
Sbjct: 174 HGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 229
Query: 218 G------------GYNQAADVWSAGVILYILLSGMPPFWG--NTKSRIFDAVR-TADLRF 262
+ +DVWS G ILY + G PF N S++ + ++ F
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 289
Query: 263 PSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
P P +D++ L DP QR++ ++L H ++
Sbjct: 290 PDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYV 324
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 115/256 (44%), Gaps = 43/256 (16%)
Query: 95 MTRLSGHPNVVDLKAVYED--EDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLM 152
+ L G PN++ L + +D LV E + F +L + ++ + R +++
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQL--YQTLTDYDIRFYMYEIL 141
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIA 212
+ + YCH +G++HRD+KP N+++ + ++L D+GLA + PGQ V S ++
Sbjct: 142 KALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 213 PEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGNTKS-----RIFDAVRTADL----- 260
PE+L Y+ + D+WS G +L ++ PF+ + RI + T DL
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 259
Query: 261 ---------------RFPSNPWDH---------ISDSAKDLVMGMLSTDPSQRLTARQVL 296
R W+ +S A D + +L D RLTAR+ +
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 319
Query: 297 DHSWMGDGIQDPEKLS 312
+H + ++D ++S
Sbjct: 320 EHPYFYTVVKDQARMS 335
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 118/249 (47%), Gaps = 36/249 (14%)
Query: 70 ACKSIAKDRLV---TIDDERSVKLEIEIMTRLS-GHPNVVDLKAVYEDEDYVHLVMELCA 125
A K + KDR+ + + V +E+ ++ ++S G V+ L +E D L++E
Sbjct: 80 AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 139
Query: 126 G-GELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPI 184
+LF + + G E AR F Q+++ V +CH GV+HRD+K ENIL+ + +
Sbjct: 140 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI--DLNRGEL 197
Query: 185 KLADFGLATYIEPGQSLLGTV-----GSPFYIAPEVLAGG--YNQAADVWSAGVILYILL 237
KL DFG G L TV G+ Y PE + + ++A VWS G++LY ++
Sbjct: 198 KLIDFG------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 251
Query: 238 SGMPPFWGN---TKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQ 294
G PF + + ++F R +S + L+ L+ PS R T +
Sbjct: 252 CGDIPFEHDEEIIRGQVFFRQR-------------VSSECQHLIRWCLALRPSDRPTFEE 298
Query: 295 VLDHSWMGD 303
+ +H WM D
Sbjct: 299 IQNHPWMQD 307
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 128/279 (45%), Gaps = 35/279 (12%)
Query: 44 VLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL--VTIDDERSVKLEIEIMTRLSGH 101
+L Q G V +V ++K +++A K + + T+D R+ EI + +L H
Sbjct: 13 ILKQIGSGGSSKVFQVLNEK--KQIYAIKYVNLEEADNQTLDSYRN---EIAYLNKLQQH 67
Query: 102 PNVVDLKAVYEDED-YVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
+ + YE D Y+++VME C +L L+K E + + +++ V H+
Sbjct: 68 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 126
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLL---GTVGSPFYIAPEVLA 217
G+VH DLKP N L+ +KL DFG+A ++P + + VG+ Y+ PE +
Sbjct: 127 HGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 182
Query: 218 G------------GYNQAADVWSAGVILYILLSGMPPFWG--NTKSRIFDAVR-TADLRF 262
+ +DVWS G ILY + G PF N S++ + ++ F
Sbjct: 183 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 242
Query: 263 PSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
P P +D++ L DP QR++ ++L H ++
Sbjct: 243 PDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYV 277
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 128/279 (45%), Gaps = 35/279 (12%)
Query: 44 VLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL--VTIDDERSVKLEIEIMTRLSGH 101
+L Q G V +V ++K +++A K + + T+D R+ EI + +L H
Sbjct: 60 ILKQIGSGGSSKVFQVLNEK--KQIYAIKYVNLEEADNQTLDSYRN---EIAYLNKLQQH 114
Query: 102 PNVVDLKAVYEDED-YVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
+ + YE D Y+++VME C +L L+K E + + +++ V H+
Sbjct: 115 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 173
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLL---GTVGSPFYIAPEVLA 217
G+VH DLKP N L+ +KL DFG+A ++P + + VG+ Y+ PE +
Sbjct: 174 HGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 229
Query: 218 G------------GYNQAADVWSAGVILYILLSGMPPFWG--NTKSRIFDAVR-TADLRF 262
+ +DVWS G ILY + G PF N S++ + ++ F
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 289
Query: 263 PSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
P P +D++ L DP QR++ ++L H ++
Sbjct: 290 PDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYV 324
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 128/279 (45%), Gaps = 35/279 (12%)
Query: 44 VLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL--VTIDDERSVKLEIEIMTRLSGH 101
+L Q G V +V ++K +++A K + + T+D R+ EI + +L H
Sbjct: 60 ILKQIGSGGSSKVFQVLNEK--KQIYAIKYVNLEEADNQTLDSYRN---EIAYLNKLQQH 114
Query: 102 PNVVDLKAVYEDED-YVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
+ + YE D Y+++VME C +L L+K E + + +++ V H+
Sbjct: 115 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 173
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLL---GTVGSPFYIAPEVLA 217
G+VH DLKP N L+ +KL DFG+A ++P + + VG+ Y+ PE +
Sbjct: 174 HGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIK 229
Query: 218 G------------GYNQAADVWSAGVILYILLSGMPPFWG--NTKSRIFDAVR-TADLRF 262
+ +DVWS G ILY + G PF N S++ + ++ F
Sbjct: 230 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 289
Query: 263 PSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
P P +D++ L DP QR++ ++L H ++
Sbjct: 290 PDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYV 324
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 138/305 (45%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 79
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G +L + + K + ++ + L Q+++
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADL-NNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ D GLA + + + G V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDRGLARHTD--DEMTGYVATRWYRAPE 192
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 253 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 310
Query: 305 IQDPE 309
DP+
Sbjct: 311 YHDPD 315
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 130/260 (50%), Gaps = 27/260 (10%)
Query: 47 QQLGWGQFGVI---RVCSDKFTGEVFACKSI----AKDRLVTIDDERSVKLEIEIMTRLS 99
+Q+G G FG++ R+ DK V A KS+ ++ I+ + + E+ IM+ L+
Sbjct: 25 KQIGKGGFGLVHKGRLVKDK---SVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRL-EKFGRFSEAEARVLFMQLMQVVLYC 158
HPN+V L + + +VME G+L+HRL +K + L + + + Y
Sbjct: 82 -HPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYM 138
Query: 159 HEIG--VVHRDLKPENILLATKASSSPI--KLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+VHRDL+ NI L + ++P+ K+ADFG T + S+ G +G+ ++APE
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG--TSQQSVHSVSGLLGNFQWMAPE 196
Query: 215 VLAG---GYNQAADVWSAGVILYILLSGMPPF--WGNTKSRIFDAVRTADLRFPSNPWDH 269
+ Y + AD +S +ILY +L+G PF + K + + +R LR P+ P D
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR-PTIPED- 254
Query: 270 ISDSAKDLVMGMLSTDPSQR 289
++++ S DP +R
Sbjct: 255 CPPRLRNVIELCWSGDPKKR 274
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 136/305 (44%), Gaps = 47/305 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
ER+ +G G +G + D TG A K +++ I +R+ + E+ ++ +
Sbjct: 22 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLLKHMK- 79
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H NV+ L V+ E+ + V+LV L G + + K + ++ + L Q+++
Sbjct: 80 HENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIVKCQKLTDDHVQFLIYQILRG 137
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ Y H ++HRDLKP N+ + +K+ D GLA + + + G V + +Y APE
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCE---LKILDGGLARHTD--DEMTGYVATRWYRAPE 192
Query: 215 VLAG--GYNQAADVWSAGVILYILLSGMPPFWG--------------------------- 245
++ YNQ D+WS G I+ LL+G F G
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS 252
Query: 246 -NTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDG 304
+ ++ I + + F +N + + A DL+ ML D +R+TA Q L H++
Sbjct: 253 ESARNYIQSLTQMPKMNF-ANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ- 310
Query: 305 IQDPE 309
DP+
Sbjct: 311 YHDPD 315
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 128/279 (45%), Gaps = 35/279 (12%)
Query: 44 VLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL--VTIDDERSVKLEIEIMTRLSGH 101
+L Q G V +V ++K +++A K + + T+D R+ EI + +L H
Sbjct: 32 ILKQIGSGGSSKVFQVLNEK--KQIYAIKYVNLEEADNQTLDSYRN---EIAYLNKLQQH 86
Query: 102 PNVVDLKAVYEDED-YVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
+ + YE D Y+++VME C +L L+K E + + +++ V H+
Sbjct: 87 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 145
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLL---GTVGSPFYIAPEVLA 217
G+VH DLKP N L+ +KL DFG+A ++P + + VG+ Y+ PE +
Sbjct: 146 HGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 201
Query: 218 G------------GYNQAADVWSAGVILYILLSGMPPFWG--NTKSRIFDAVR-TADLRF 262
+ +DVWS G ILY + G PF N S++ + ++ F
Sbjct: 202 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 261
Query: 263 PSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
P P +D++ L DP QR++ ++L H ++
Sbjct: 262 PDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYV 296
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 108/221 (48%), Gaps = 16/221 (7%)
Query: 40 RERFVLGQQLGWGQFG-VIRVCSDKFTGEVF--ACKSIAKDRLVTIDDERSVKLEIEIMT 96
RE VL + LG G FG V GE A K+ KD T+D++ E IM
Sbjct: 23 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD--CTLDNKEKFMSEAVIMK 80
Query: 97 RLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLF-MQLMQVV 155
L HP++V L + E+E ++MEL GEL H LE+ + VL+ +Q+ + +
Sbjct: 81 NLD-HPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAM 138
Query: 156 LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGS-PF-YIAP 213
Y I VHRD+ NIL+ AS +KL DFGL+ YIE +V P +++P
Sbjct: 139 AYLESINCVHRDIAVRNILV---ASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 195
Query: 214 EVLA-GGYNQAADVWSAGVILYILLS--GMPPFWGNTKSRI 251
E + + A+DVW V ++ +LS P FW K I
Sbjct: 196 ESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 236
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 132/292 (45%), Gaps = 52/292 (17%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDER-SVKLEIEIMTRLSGHPNVV 105
Q LG G FGV+ +K +A K I RL + R V E++ + +L HP +V
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRI---RLPNRELAREKVMREVKALAKLE-HPGIV 66
Query: 106 DLKAVYEDED------------YVHLVMELCAGGELFHRLEKFGRFSEAEARV---LFMQ 150
+ +++ Y+++ M+LC L + E E V +F+Q
Sbjct: 67 RYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQ 126
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYI---EPGQSLL----- 202
+ + V + H G++HRDLKP NI +K+ DFGL T + E Q++L
Sbjct: 127 IAEAVEFLHSKGLMHRDLKPSNIFFTM---DDVVKVGDFGLVTAMDQDEEEQTVLTPMPA 183
Query: 203 -----GTVGSPFYIAPEVLAGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVR 256
G VG+ Y++PE + G Y+ D++S G+IL+ LL PF R+
Sbjct: 184 YARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PF-STQMERVRTLTD 239
Query: 257 TADLRFP-----SNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
+L+FP P +++ +V MLS P +R A +++++ D
Sbjct: 240 VRNLKFPPLFTQKYPCEYV------MVQDMLSPSPMERPEAINIIENAVFED 285
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 127/279 (45%), Gaps = 35/279 (12%)
Query: 44 VLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL--VTIDDERSVKLEIEIMTRLSGH 101
+L Q G V +V ++K +++A K + + T+D R+ EI + +L H
Sbjct: 32 ILKQIGSGGSSKVFQVLNEK--KQIYAIKYVNLEEADNQTLDSYRN---EIAYLNKLQQH 86
Query: 102 PNVVDLKAVYEDED-YVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
+ + YE D Y+++VME C +L L+K E + + +++ V H+
Sbjct: 87 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 145
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLL---GTVGSPFYIAPEVLA 217
G+VH DLKP N L+ +KL DFG+A ++P + VG+ Y+ PE +
Sbjct: 146 HGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIK 201
Query: 218 G------------GYNQAADVWSAGVILYILLSGMPPFWG--NTKSRIFDAVR-TADLRF 262
+ +DVWS G ILY + G PF N S++ + ++ F
Sbjct: 202 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 261
Query: 263 PSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
P P +D++ L DP QR++ ++L H ++
Sbjct: 262 PDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYV 296
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 114/255 (44%), Gaps = 43/255 (16%)
Query: 95 MTRLSGHPNVVDLKAVYED--EDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLM 152
+ L G PN++ L + +D LV E + F +L + ++ + R +++
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQL--YQTLTDYDIRFYMYEIL 141
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIA 212
+ + YCH +G++HRD+KP N+L+ + ++L D+GLA + PGQ V S ++
Sbjct: 142 KALDYCHSMGIMHRDVKPHNVLIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 213 PEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGNTKS-----RIFDAVRTADL----- 260
PE+L Y+ + D+WS G +L ++ PF+ + RI + T DL
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 259
Query: 261 ---------------RFPSNPWDH---------ISDSAKDLVMGMLSTDPSQRLTARQVL 296
R W+ +S A D + +L D RLTAR+ +
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 319
Query: 297 DHSWMGDGIQDPEKL 311
+H + ++D ++
Sbjct: 320 EHPYFYTVVKDQARM 334
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 108/221 (48%), Gaps = 16/221 (7%)
Query: 40 RERFVLGQQLGWGQFG-VIRVCSDKFTGEVF--ACKSIAKDRLVTIDDERSVKLEIEIMT 96
RE VL + LG G FG V GE A K+ KD T+D++ E IM
Sbjct: 7 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD--CTLDNKEKFMSEAVIMK 64
Query: 97 RLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLF-MQLMQVV 155
L HP++V L + E+E ++MEL GEL H LE+ + VL+ +Q+ + +
Sbjct: 65 NLD-HPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAM 122
Query: 156 LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGS-PF-YIAP 213
Y I VHRD+ NIL+ AS +KL DFGL+ YIE +V P +++P
Sbjct: 123 AYLESINCVHRDIAVRNILV---ASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 179
Query: 214 EVLA-GGYNQAADVWSAGVILYILLS--GMPPFWGNTKSRI 251
E + + A+DVW V ++ +LS P FW K I
Sbjct: 180 ESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 220
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 128/279 (45%), Gaps = 35/279 (12%)
Query: 44 VLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL--VTIDDERSVKLEIEIMTRLSGH 101
+L Q G V +V ++K +++A K + + T+D R+ EI + +L H
Sbjct: 16 ILKQIGSGGSSKVFQVLNEK--KQIYAIKYVNLEEADNQTLDSYRN---EIAYLNKLQQH 70
Query: 102 PNVVDLKAVYEDED-YVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
+ + YE D Y+++VME C +L L+K E + + +++ V H+
Sbjct: 71 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 129
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLL---GTVGSPFYIAPEVLA 217
G+VH DLKP N L+ +KL DFG+A ++P + + VG+ Y+ PE +
Sbjct: 130 HGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 185
Query: 218 G------------GYNQAADVWSAGVILYILLSGMPPFWG--NTKSRIFDAVR-TADLRF 262
+ +DVWS G ILY + G PF N S++ + ++ F
Sbjct: 186 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 245
Query: 263 PSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
P P +D++ L DP QR++ ++L H ++
Sbjct: 246 PDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYV 280
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 128/279 (45%), Gaps = 35/279 (12%)
Query: 44 VLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL--VTIDDERSVKLEIEIMTRLSGH 101
+L Q G V +V ++K +++A K + + T+D R+ EI + +L H
Sbjct: 12 ILKQIGSGGSSKVFQVLNEK--KQIYAIKYVNLEEADNQTLDSYRN---EIAYLNKLQQH 66
Query: 102 PNVVDLKAVYEDED-YVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
+ + YE D Y+++VME C +L L+K E + + +++ V H+
Sbjct: 67 SDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 125
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLL---GTVGSPFYIAPEVLA 217
G+VH DLKP N L+ +KL DFG+A ++P + + VG+ Y+ PE +
Sbjct: 126 HGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIK 181
Query: 218 G------------GYNQAADVWSAGVILYILLSGMPPFWG--NTKSRIFDAVR-TADLRF 262
+ +DVWS G ILY + G PF N S++ + ++ F
Sbjct: 182 DMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEF 241
Query: 263 PSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
P P +D++ L DP QR++ ++L H ++
Sbjct: 242 PDIP----EKDLQDVLKCCLKRDPKQRISIPELLAHPYV 276
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 108/221 (48%), Gaps = 16/221 (7%)
Query: 40 RERFVLGQQLGWGQFG-VIRVCSDKFTGEVF--ACKSIAKDRLVTIDDERSVKLEIEIMT 96
RE VL + LG G FG V GE A K+ KD T+D++ E IM
Sbjct: 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD--CTLDNKEKFMSEAVIMK 68
Query: 97 RLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLF-MQLMQVV 155
L HP++V L + E+E ++MEL GEL H LE+ + VL+ +Q+ + +
Sbjct: 69 NLD-HPHIVKLIGIIEEEP-TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAM 126
Query: 156 LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGS-PF-YIAP 213
Y I VHRD+ NIL+ AS +KL DFGL+ YIE +V P +++P
Sbjct: 127 AYLESINCVHRDIAVRNILV---ASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 183
Query: 214 EVLA-GGYNQAADVWSAGVILYILLS--GMPPFWGNTKSRI 251
E + + A+DVW V ++ +LS P FW K I
Sbjct: 184 ESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 224
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 130/260 (50%), Gaps = 27/260 (10%)
Query: 47 QQLGWGQFGVI---RVCSDKFTGEVFACKSI----AKDRLVTIDDERSVKLEIEIMTRLS 99
+Q+G G FG++ R+ DK V A KS+ ++ I+ + + E+ IM+ L+
Sbjct: 25 KQIGKGGFGLVHKGRLVKDK---SVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN 81
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRL-EKFGRFSEAEARVLFMQLMQVVLYC 158
HPN+V L + + +VME G+L+HRL +K + L + + + Y
Sbjct: 82 -HPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYM 138
Query: 159 HEIG--VVHRDLKPENILLATKASSSPI--KLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+VHRDL+ NI L + ++P+ K+ADF L+ + S+ G +G+ ++APE
Sbjct: 139 QNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ--QSVHSVSGLLGNFQWMAPE 196
Query: 215 VLAG---GYNQAADVWSAGVILYILLSGMPPF--WGNTKSRIFDAVRTADLRFPSNPWDH 269
+ Y + AD +S +ILY +L+G PF + K + + +R LR P+ P D
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR-PTIPED- 254
Query: 270 ISDSAKDLVMGMLSTDPSQR 289
++++ S DP +R
Sbjct: 255 CPPRLRNVIELCWSGDPKKR 274
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 114/255 (44%), Gaps = 43/255 (16%)
Query: 95 MTRLSGHPNVVDLKAVYED--EDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLM 152
+ L G PN++ L + +D LV E + F +L + ++ + R +++
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQL--YQTLTDYDIRFYMYEIL 141
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIA 212
+ + YCH +G++HRD+KP N+++ + ++L D+GLA + PGQ V S ++
Sbjct: 142 KALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 213 PEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGNTKS-----RIFDAVRTADL----- 260
PE+L Y+ + D+WS G +L ++ PF+ + RI + T DL
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 259
Query: 261 ---------------RFPSNPWDH---------ISDSAKDLVMGMLSTDPSQRLTARQVL 296
R W+ +S A D + +L D RLTAR+ +
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 319
Query: 297 DHSWMGDGIQDPEKL 311
+H + ++D ++
Sbjct: 320 EHPYFYTVVKDQARM 334
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 114/255 (44%), Gaps = 43/255 (16%)
Query: 95 MTRLSGHPNVVDLKAVYED--EDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLM 152
+ L G PN++ L + +D LV E + F +L + ++ + R +++
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQL--YQTLTDYDIRFYMYEIL 141
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIA 212
+ + YCH +G++HRD+KP N+++ + ++L D+GLA + PGQ V S ++
Sbjct: 142 KALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 213 PEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGNTKS-----RIFDAVRTADL----- 260
PE+L Y+ + D+WS G +L ++ PF+ + RI + T DL
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 259
Query: 261 ---------------RFPSNPWDH---------ISDSAKDLVMGMLSTDPSQRLTARQVL 296
R W+ +S A D + +L D RLTAR+ +
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 319
Query: 297 DHSWMGDGIQDPEKL 311
+H + ++D ++
Sbjct: 320 EHPYFYTVVKDQARM 334
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 102/212 (48%), Gaps = 13/212 (6%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKL-EIEIMTRLS 99
E ++ +LG G + + K T + A K I RL + + E+ ++ L
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEI---RLEHEEGAPCTAIREVSLLKDLK 58
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM-QLMQVVLYC 158
H N+V L + E + LV E +L L+ G LF+ QL++ + YC
Sbjct: 59 -HANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYC 116
Query: 159 HEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIE-PGQSLLGTVGSPFYIAPEVLA 217
H V+HRDLKP+N+L+ + +KLADFGLA P ++ V + +Y P++L
Sbjct: 117 HRQKVLHRDLKPQNLLINERGE---LKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILL 173
Query: 218 GG--YNQAADVWSAGVILYILLSGMPPFWGNT 247
G Y+ D+W G I Y + +G P F G+T
Sbjct: 174 GSTDYSTQIDMWGVGCIFYEMATGRPLFPGST 205
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 135/312 (43%), Gaps = 59/312 (18%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKL----EIEIMTRLSG--H 101
++G G +G + D G F +A R+ E + L E+ ++ L H
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRF----VALKRVRVQTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 102 PNVVDLKAV-----YEDEDYVHLVMELCAGGELFHRLEKF---GRFSEAEARVLFMQLMQ 153
PNVV L V + E + LV E +L L+K G +E ++F QL++
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFE-HVDQDLTTYLDKVPEPGVPTETIKDMMF-QLLR 131
Query: 154 VVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAP 213
+ + H VVHRDLKP+NIL+ SS IKLADFGLA +L V + +Y AP
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
Query: 214 EV-LAGGYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTA-------DLR 261
EV L Y D+WS G I + P F G++ +I D + D+
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 248
Query: 262 FPSNPWD------------HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPE 309
P + I + KDL++ L+ +P++R++A L H + D
Sbjct: 249 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD------ 302
Query: 310 KLSGNKIEDCKE 321
+E CKE
Sbjct: 303 ------LERCKE 308
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 133/297 (44%), Gaps = 50/297 (16%)
Query: 39 LRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRL 98
L+ V + LG+G G + V F G A K + ID +EI+++T
Sbjct: 13 LKNLVVSEKILGYGSSGTV-VFQGSFQGRPVAVKRM------LIDFCDIALMEIKLLTES 65
Query: 99 SGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARV--------LFMQ 150
HPNV+ + ++++ +ELC L + S+ ++ L Q
Sbjct: 66 DDHPNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQ 123
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLATK----------ASSSPIKLADFGLATYIEPGQ- 199
+ V + H + ++HRDLKP+NIL++T A + I ++DFGL ++ GQ
Sbjct: 124 IASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 183
Query: 200 ----SLLGTVGSPFYIAPEVLAGGYN--------QAADVWSAGVILYILLS-GMPPFWGN 246
+L G+ + APE+L N ++ D++S G + Y +LS G PF G+
Sbjct: 184 XFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF-GD 242
Query: 247 TKSRIFDAVRTADLRFPSNPWDHISD-----SAKDLVMGMLSTDPSQRLTARQVLDH 298
SR + +R F + + D A DL+ M+ DP +R TA +VL H
Sbjct: 243 KYSRESNIIRGI---FSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 296
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 114/255 (44%), Gaps = 43/255 (16%)
Query: 95 MTRLSGHPNVVDLKAVYED--EDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLM 152
+ L G PN++ L + +D LV E + F +L + ++ + R +++
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQL--YQTLTDYDIRFYMYEIL 141
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIA 212
+ + YCH +G++HRD+KP N+++ + ++L D+GLA + PGQ V S ++
Sbjct: 142 KALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 213 PEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGNTKS-----RIFDAVRTADL----- 260
PE+L Y+ + D+WS G +L ++ PF+ + RI + T DL
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 259
Query: 261 ---------------RFPSNPWDH---------ISDSAKDLVMGMLSTDPSQRLTARQVL 296
R W+ +S A D + +L D RLTAR+ +
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 319
Query: 297 DHSWMGDGIQDPEKL 311
+H + ++D ++
Sbjct: 320 EHPYFYTVVKDQARM 334
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 114/255 (44%), Gaps = 43/255 (16%)
Query: 95 MTRLSGHPNVVDLKAVYED--EDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLM 152
+ L G PN++ L + +D LV E + F +L + ++ + R +++
Sbjct: 84 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQL--YQTLTDYDIRFYMYEIL 140
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIA 212
+ + YCH +G++HRD+KP N+++ + ++L D+GLA + PGQ V S ++
Sbjct: 141 KALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVASRYFKG 198
Query: 213 PEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGNTKS-----RIFDAVRTADL----- 260
PE+L Y+ + D+WS G +L ++ PF+ + RI + T DL
Sbjct: 199 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 258
Query: 261 ---------------RFPSNPWDH---------ISDSAKDLVMGMLSTDPSQRLTARQVL 296
R W+ +S A D + +L D RLTAR+ +
Sbjct: 259 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 318
Query: 297 DHSWMGDGIQDPEKL 311
+H + ++D ++
Sbjct: 319 EHPYFYTVVKDQARM 333
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 114/255 (44%), Gaps = 43/255 (16%)
Query: 95 MTRLSGHPNVVDLKAVYED--EDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLM 152
+ L G PN++ L + +D LV E + F +L + ++ + R +++
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQL--YQTLTDYDIRFYMYEIL 141
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIA 212
+ + YCH +G++HRD+KP N+++ + ++L D+GLA + PGQ V S ++
Sbjct: 142 KALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 213 PEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGNTKS-----RIFDAVRTADL----- 260
PE+L Y+ + D+WS G +L ++ PF+ + RI + T DL
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 259
Query: 261 ---------------RFPSNPWDH---------ISDSAKDLVMGMLSTDPSQRLTARQVL 296
R W+ +S A D + +L D RLTAR+ +
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 319
Query: 297 DHSWMGDGIQDPEKL 311
+H + ++D ++
Sbjct: 320 EHPYFYTVVKDQARM 334
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 114/255 (44%), Gaps = 43/255 (16%)
Query: 95 MTRLSGHPNVVDLKAVYED--EDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLM 152
+ L G PN++ L + +D LV E + F +L + ++ + R +++
Sbjct: 90 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQL--YQTLTDYDIRFYMYEIL 146
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIA 212
+ + YCH +G++HRD+KP N+++ + ++L D+GLA + PGQ V S ++
Sbjct: 147 KALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVASRYFKG 204
Query: 213 PEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGNTKS-----RIFDAVRTADL----- 260
PE+L Y+ + D+WS G +L ++ PF+ + RI + T DL
Sbjct: 205 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 264
Query: 261 ---------------RFPSNPWDH---------ISDSAKDLVMGMLSTDPSQRLTARQVL 296
R W+ +S A D + +L D RLTAR+ +
Sbjct: 265 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 324
Query: 297 DHSWMGDGIQDPEKL 311
+H + ++D ++
Sbjct: 325 EHPYFYTVVKDQARM 339
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 132/293 (45%), Gaps = 46/293 (15%)
Query: 39 LRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRL 98
L+ V + LG+G G + V F G A K + ID +EI+++T
Sbjct: 31 LKNLVVSEKILGYGSSGTV-VFQGSFQGRPVAVKRM------LIDFCDIALMEIKLLTES 83
Query: 99 SGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARV--------LFMQ 150
HPNV+ + ++++ +ELC L + S+ ++ L Q
Sbjct: 84 DDHPNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQ 141
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLATK----------ASSSPIKLADFGLATYIEPGQ- 199
+ V + H + ++HRDLKP+NIL++T A + I ++DFGL ++ GQ
Sbjct: 142 IASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 201
Query: 200 ----SLLGTVGSPFYIAPEVLAGG----YNQAADVWSAGVILYILLS-GMPPFWGNTKSR 250
+L G+ + APE+L ++ D++S G + Y +LS G PF G+ SR
Sbjct: 202 XFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF-GDKYSR 260
Query: 251 IFDAVRTADLRFPSNPWDHISD-----SAKDLVMGMLSTDPSQRLTARQVLDH 298
+ +R F + + D A DL+ M+ DP +R TA +VL H
Sbjct: 261 ESNIIRGI---FSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 310
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 114/255 (44%), Gaps = 43/255 (16%)
Query: 95 MTRLSGHPNVVDLKAVYED--EDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLM 152
+ L G PN++ L + +D LV E + F +L + ++ + R +++
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQLRQ--TLTDYDIRFYMYEIL 141
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIA 212
+ + YCH +G++HRD+KP N+++ + ++L D+GLA + PGQ V S ++
Sbjct: 142 KALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 213 PEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGNTKS-----RIFDAVRTADL----- 260
PE+L Y+ + D+WS G +L ++ PF+ + RI + T DL
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 259
Query: 261 ---------------RFPSNPWDH---------ISDSAKDLVMGMLSTDPSQRLTARQVL 296
R W+ +S A D + +L D RLTAR+ +
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 319
Query: 297 DHSWMGDGIQDPEKL 311
+H + ++D ++
Sbjct: 320 EHPYFYTVVKDQARM 334
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 132/293 (45%), Gaps = 46/293 (15%)
Query: 39 LRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRL 98
L+ V + LG+G G + V F G A K + ID +EI+++T
Sbjct: 31 LKNLVVSEKILGYGSSGTV-VFQGSFQGRPVAVKRM------LIDFCDIALMEIKLLTES 83
Query: 99 SGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARV--------LFMQ 150
HPNV+ + ++++ +ELC L + S+ ++ L Q
Sbjct: 84 DDHPNVIRYYCSETTDRFLYIALELCNLN--LQDLVESKNVSDENLKLQKEYNPISLLRQ 141
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLATK----------ASSSPIKLADFGLATYIEPGQ- 199
+ V + H + ++HRDLKP+NIL++T A + I ++DFGL ++ GQ
Sbjct: 142 IASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQX 201
Query: 200 ----SLLGTVGSPFYIAPEVLAGG----YNQAADVWSAGVILYILLS-GMPPFWGNTKSR 250
+L G+ + APE+L ++ D++S G + Y +LS G PF G+ SR
Sbjct: 202 XFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPF-GDKYSR 260
Query: 251 IFDAVRTADLRFPSNPWDHISD-----SAKDLVMGMLSTDPSQRLTARQVLDH 298
+ +R F + + D A DL+ M+ DP +R TA +VL H
Sbjct: 261 ESNIIRGI---FSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 310
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 135/308 (43%), Gaps = 57/308 (18%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G G++ D G A K +++ +R+ + E+ ++ +
Sbjct: 22 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYR-EL-VLLKCVN 79
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGG--ELFHRLEKFGRFSEAEARVLFMQLM 152
H N++ L V+ E+ V+LVMEL ++ H R S L Q++
Sbjct: 80 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMS-----YLLYQML 134
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIA 212
+ + H G++HRDLKP NI++ + + +K+ DFGLA + V + +Y A
Sbjct: 135 CGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLARTASTNFMMTPYVVTRYYRA 191
Query: 213 PEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTADLRF----- 262
PEV+ G GY + D+WS G I+ L+ G F G +++ + + T F
Sbjct: 192 PEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQ 251
Query: 263 ----------PSNP----------WDHISDS---------AKDLVMGMLSTDPSQRLTAR 293
P+ P W S+S A+DL+ ML DP +R++
Sbjct: 252 PTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVD 311
Query: 294 QVLDHSWM 301
+ L H ++
Sbjct: 312 EALRHPYI 319
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 112/251 (44%), Gaps = 43/251 (17%)
Query: 95 MTRLSGHPNVVDLKAVYED--EDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLM 152
+ L G PN++ L + +D LV E + F +L + ++ + R +++
Sbjct: 84 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQL--YQTLTDYDIRFYMYEIL 140
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIA 212
+ + YCH +G++HRD+KP N+++ + ++L D+GLA + PGQ V S ++
Sbjct: 141 KALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVASRYFKG 198
Query: 213 PEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGNTKS-----RIFDAVRTADL----- 260
PE+L Y+ + D+WS G +L ++ PF+ + RI + T DL
Sbjct: 199 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 258
Query: 261 ---------------RFPSNPWDH---------ISDSAKDLVMGMLSTDPSQRLTARQVL 296
R W+ +S A D + +L D RLTAR+ +
Sbjct: 259 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 318
Query: 297 DHSWMGDGIQD 307
+H + ++D
Sbjct: 319 EHPYFYTVVKD 329
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 135/312 (43%), Gaps = 59/312 (18%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKL----EIEIMTRLSG--H 101
++G G +G + D G F +A R+ E + L E+ ++ L H
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRF----VALKRVRVQTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 102 PNVVDLKAV-----YEDEDYVHLVMELCAGGELFHRLEKF---GRFSEAEARVLFMQLMQ 153
PNVV L V + E + LV E +L L+K G +E ++F QL++
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFE-HVDQDLTTYLDKVPEPGVPTETIKDMMF-QLLR 131
Query: 154 VVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAP 213
+ + H VVHRDLKP+NIL+ SS IKLADFGLA +L V + +Y AP
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
Query: 214 EV-LAGGYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTA-------DLR 261
EV L Y D+WS G I + P F G++ +I D + D+
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 248
Query: 262 FPSNPWD------------HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDPE 309
P + I + KDL++ L+ +P++R++A L H + D
Sbjct: 249 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD------ 302
Query: 310 KLSGNKIEDCKE 321
+E CKE
Sbjct: 303 ------LERCKE 308
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 112/251 (44%), Gaps = 43/251 (17%)
Query: 95 MTRLSGHPNVVDLKAVYED--EDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLM 152
+ L G PN++ L + +D LV E + F +L + ++ + R +++
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQL--YQTLTDYDIRFYMYEIL 141
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIA 212
+ + YCH +G++HRD+KP N+++ + ++L D+GLA + PGQ V S ++
Sbjct: 142 KALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 213 PEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGNTKS-----RIFDAVRTADL----- 260
PE+L Y+ + D+WS G +L ++ PF+ + RI + T DL
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 259
Query: 261 ---------------RFPSNPWDH---------ISDSAKDLVMGMLSTDPSQRLTARQVL 296
R W+ +S A D + +L D RLTAR+ +
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 319
Query: 297 DHSWMGDGIQD 307
+H + ++D
Sbjct: 320 EHPYFYTVVKD 330
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 112/251 (44%), Gaps = 43/251 (17%)
Query: 95 MTRLSGHPNVVDLKAVYED--EDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLM 152
+ L G PN++ L + +D LV E + F +L + ++ + R +++
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQL--YQTLTDYDIRFYMYEIL 141
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIA 212
+ + YCH +G++HRD+KP N+++ + ++L D+GLA + PGQ V S ++
Sbjct: 142 KALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 213 PEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGNTKS-----RIFDAVRTADL----- 260
PE+L Y+ + D+WS G +L ++ PF+ + RI + T DL
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 259
Query: 261 ---------------RFPSNPWDH---------ISDSAKDLVMGMLSTDPSQRLTARQVL 296
R W+ +S A D + +L D RLTAR+ +
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 319
Query: 297 DHSWMGDGIQD 307
+H + ++D
Sbjct: 320 EHPYFYTVVKD 330
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 145/347 (41%), Gaps = 89/347 (25%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+ +++ +G G +G + + DK T + A K + + ID +R ++ EI I+ RL
Sbjct: 26 DNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILR-EITILNRLKS 84
Query: 101 HPNVVDLKAVYEDE----DYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVL 156
+ + D+ D +++V+E+ A +L + +E + + L+
Sbjct: 85 DYIIRLYDLIIPDDLLKFDELYIVLEI-ADSDLKKLFKTPIFLTEEHIKTILYNLLLGEN 143
Query: 157 YCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYI----------------EPG-- 198
+ HE G++HRDLKP N LL S +K+ DFGLA I EPG
Sbjct: 144 FIHESGIIHRDLKPANCLLNQDCS---VKVCDFGLARTINSEKDTNIVNDLEENEEPGPH 200
Query: 199 -----QSLLGTVGSPFYIAPE--VLAGGYNQAADVWSAGVILYILLSGM----------- 240
+ L V + +Y APE +L Y ++ D+WS G I LL+ +
Sbjct: 201 NKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRF 260
Query: 241 PPFWG----------NTK-----------SRIFDAVRTA---DLRFPSNP---------- 266
P F G N+K + IF+ + T DL+ + P
Sbjct: 261 PLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFP 320
Query: 267 ----------WDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
+ ISD +L+ ML +P++R+T Q LDH ++ D
Sbjct: 321 HRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKD 367
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 112/251 (44%), Gaps = 43/251 (17%)
Query: 95 MTRLSGHPNVVDLKAVYED--EDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLM 152
+ L G PN++ L + +D LV E + F +L + ++ + R +++
Sbjct: 83 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQL--YQTLTDYDIRFYMYEIL 139
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIA 212
+ + YCH +G++HRD+KP N+++ + ++L D+GLA + PGQ V S ++
Sbjct: 140 KALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVASRYFKG 197
Query: 213 PEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGNTKS-----RIFDAVRTADL----- 260
PE+L Y+ + D+WS G +L ++ PF+ + RI + T DL
Sbjct: 198 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 257
Query: 261 ---------------RFPSNPWDH---------ISDSAKDLVMGMLSTDPSQRLTARQVL 296
R W+ +S A D + +L D RLTAR+ +
Sbjct: 258 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 317
Query: 297 DHSWMGDGIQD 307
+H + ++D
Sbjct: 318 EHPYFYTVVKD 328
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 138/320 (43%), Gaps = 74/320 (23%)
Query: 38 NLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVK---LEIEI 94
+L R++ + LG G G++ D + A K I + D +SVK EI+I
Sbjct: 8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKI------VLTDPQSVKHALREIKI 61
Query: 95 MTRLSGHPNVV---------------------DLKAVYEDEDYVHLVMELCAGGELFHRL 133
+ RL H N+V +L +VY ++Y+ +L + L
Sbjct: 62 IRRLD-HDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME--------TDLANVL 112
Query: 134 EKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLAT 193
E+ G E AR+ QL++ + Y H V+HRDLKP N+ + T+ +K+ DFGLA
Sbjct: 113 EQ-GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTE--DLVLKIGDFGLAR 169
Query: 194 YIEPGQSLLGTVG----SPFYIAPEVL--AGGYNQAADVWSAGVILYILLSGMPPFWGNT 247
++P S G + + +Y +P +L Y +A D+W+AG I +L+G F G
Sbjct: 170 IMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH 229
Query: 248 K----SRIFDAVRTA------------------DLRFPSNPWDH----ISDSAKDLVMGM 281
+ I +++ D+ P P IS A D + +
Sbjct: 230 ELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQI 289
Query: 282 LSTDPSQRLTARQVLDHSWM 301
L+ P RLTA + L H +M
Sbjct: 290 LTFSPMDRLTAEEALSHPYM 309
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 109/245 (44%), Gaps = 43/245 (17%)
Query: 95 MTRLSGHPNVVDLKAVYED--EDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLM 152
+ L G PN++ L + +D LV E + F +L + ++ + R +++
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTD-FKQL--YQTLTDYDIRFYMYEIL 141
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIA 212
+ + YCH +G++HRD+KP N+++ + ++L D+GLA + PGQ V S ++
Sbjct: 142 KALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 213 PEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGNTKS-----RIFDAVRTADL----- 260
PE+L Y+ + D+WS G +L ++ PF+ + RI + T DL
Sbjct: 200 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 259
Query: 261 ---------------RFPSNPWDH---------ISDSAKDLVMGMLSTDPSQRLTARQVL 296
R W+ +S A D + +L D RLTAR+ +
Sbjct: 260 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAM 319
Query: 297 DHSWM 301
+H +
Sbjct: 320 EHPYF 324
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 129/292 (44%), Gaps = 47/292 (16%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKL----EIEIMTRLSG--H 101
++G G +G + D G F +A R+ E + L E+ ++ L H
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRF----VALKRVRVQTGEEGMPLSTIREVAVLRHLETFEH 73
Query: 102 PNVVDLKAV-----YEDEDYVHLVMELCAGGELFHRLEKF---GRFSEAEARVLFMQLMQ 153
PNVV L V + E + LV E +L L+K G +E ++F QL++
Sbjct: 74 PNVVRLFDVCTVSRTDRETKLTLVFE-HVDQDLTTYLDKVPEPGVPTETIKDMMF-QLLR 131
Query: 154 VVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAP 213
+ + H VVHRDLKP+NIL+ SS IKLADFGLA +L V + +Y AP
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILV---TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAP 188
Query: 214 EV-LAGGYNQAADVWSAGVILYILLSGMPPFWGNTK----SRIFDAVRTA-------DLR 261
EV L Y D+WS G I + P F G++ +I D + D+
Sbjct: 189 EVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA 248
Query: 262 FPSNPWD------------HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
P + I + KDL++ L+ +P++R++A L H +
Sbjct: 249 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF 300
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 102/241 (42%), Gaps = 41/241 (17%)
Query: 35 QISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI 94
Q+SN+ F + ++G G F + + + + +V + IA L+ + E++
Sbjct: 18 QLSNV---FKIEDKIGEGTFSSVYLATAQL--QVGPEEKIALKHLIPTSHPIRIAAELQC 72
Query: 95 MTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
+T G NV+ +K + D+V + M L+ S E R + L +
Sbjct: 73 LTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESF---LDILNSLSFQEVREYMLNLFKA 129
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-----TYIE------------- 196
+ H+ G+VHRD+KP N L + L DFGLA T IE
Sbjct: 130 LKRIHQFGIVHRDVKPSNFLYNRRLKK--YALVDFGLAQGTHDTKIELLKFVQSEAQQER 187
Query: 197 -----------PGQSLLGTVGSPFYIAPEVLAGGYNQ--AADVWSAGVILYILLSGMPPF 243
Q + G+P + APEVL NQ A D+WSAGVI LLSG PF
Sbjct: 188 CSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247
Query: 244 W 244
+
Sbjct: 248 Y 248
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 127/296 (42%), Gaps = 41/296 (13%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
Q +G G +G + D TG A K + + + +R+ + E+ ++ + H NV+
Sbjct: 31 QPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYR-ELRLLKHMR-HENVIG 88
Query: 107 LKAVYE-DE---DYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIG 162
L V+ DE D+ + + G +L K + E + L Q+++ + Y H G
Sbjct: 89 LLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG 148
Query: 163 VVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAG--GY 220
++HRDLKP N+ + +K+ DFGLA + + G V + +Y APEV+ Y
Sbjct: 149 IIHRDLKPGNLAV---NEDCELKILDFGLAR--QADSEMXGXVVTRWYRAPEVILNWMRY 203
Query: 221 NQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHI-SDSAKDLVM 279
Q D+WS G I+ +++G F G+ + P+ + SD AK+ +
Sbjct: 204 TQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMK 263
Query: 280 G--------------------------MLSTDPSQRLTARQVLDHSWMGDGIQDPE 309
G ML D QR+TA + L H + + + D E
Sbjct: 264 GLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF-ESLHDTE 318
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 139/311 (44%), Gaps = 61/311 (19%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G G++ D A K +++ +R+ + E+ +M ++
Sbjct: 24 KRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KVVN 81
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARV--LFMQLM 152
H N++ L V+ E+ V++VMEL L + + R+ L Q++
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-----LSQVIQMELDHERMSYLLYQML 136
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT--VGSPFY 210
+ + H G++HRDLKP NI++ + A+ +K+ DFGLA G S + T V + +Y
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDAT---LKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 211 IAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGNTK-------------------SR 250
APEV+ G GY + D+WS GVI+ ++ G F G +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 251 IFDAVRT-----------------ADLRFPSNPWDH--ISDSAKDLVMGMLSTDPSQRLT 291
+ VRT D+ FP++ + + A+DL+ ML D S+R++
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 292 ARQVLDHSWMG 302
+ L H ++
Sbjct: 312 VDEALQHPYIN 322
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 132/308 (42%), Gaps = 57/308 (18%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G G++ D G A K +++ +R+ + E+ ++ +
Sbjct: 24 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYR-EL-VLLKCVN 81
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGG--ELFHRLEKFGRFSEAEARVLFMQLM 152
H N++ L V+ E+ V+LVMEL ++ H R S L Q++
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMS-----YLLYQML 136
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIA 212
+ + H G++HRDLKP NI++ S +K+ DFGLA + V + +Y A
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVV---KSDCTLKILDFGLARTACTNFMMTPYVVTRYYRA 193
Query: 213 PEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGN--------------TKSRIFDAVRT 257
PEV+ G GY D+WS G I+ L+ G F G T S F A
Sbjct: 194 PEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMAALQ 253
Query: 258 ADLR----------------------FPS-NPWDHISDS-AKDLVMGMLSTDPSQRLTAR 293
+R FPS + D I S A+DL+ ML DP +R++
Sbjct: 254 PTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVD 313
Query: 294 QVLDHSWM 301
+ L H ++
Sbjct: 314 EALRHPYI 321
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 139/311 (44%), Gaps = 61/311 (19%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G G++ D A K +++ +R+ + E+ +M ++
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KVVN 81
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARV--LFMQLM 152
H N++ L V+ E+ V++VMEL L + + R+ L Q++
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-----LSQVIQMELDHERMSYLLYQML 136
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT--VGSPFY 210
+ + H G++HRDLKP NI++ + A+ +K+ DFGLA G S + T V + +Y
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDAT---LKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 211 IAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGNTK-------------------SR 250
APEV+ G GY + D+WS GVI+ ++ G F G +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 251 IFDAVRT-----------------ADLRFPSNPWDH--ISDSAKDLVMGMLSTDPSQRLT 291
+ VRT D+ FP++ + + A+DL+ ML D S+R++
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 292 ARQVLDHSWMG 302
+ L H ++
Sbjct: 312 VDEALQHPYIN 322
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 135/310 (43%), Gaps = 49/310 (15%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+ + + + +G G +GV+ + TG+ A K I V + +R+++ E++I+
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-ELKILKHFK- 112
Query: 101 HPNVVDLKAV------YEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H N++ +K + Y + V++V++L +L + + R QL++
Sbjct: 113 HDNIIAIKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRG 171
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYI--EPGQS---LLGTVGSPF 209
+ Y H V+HRDLKP N+L+ +K+ DFG+A + P + + V + +
Sbjct: 172 LKYMHSAQVIHRDLKPSNLLVNENCE---LKIGDFGMARGLCTSPAEHQYFMTEYVATRW 228
Query: 210 YIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNT-------------------- 247
Y APE++ Y QA D+WS G I +L+ F G
Sbjct: 229 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVI 288
Query: 248 ----KSRIFDAVRTADLRFPSNPWDHISDSAK----DLVMGMLSTDPSQRLTARQVLDHS 299
R+ +++ R P PW+ + A L+ ML +PS R++A L H
Sbjct: 289 QAVGAERVRAYIQSLPPRQPV-PWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHP 347
Query: 300 WMGDGIQDPE 309
++ DP+
Sbjct: 348 FLAK-YHDPD 356
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 108/213 (50%), Gaps = 15/213 (7%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDE-RSVKLEIEIMTRLSGH 101
L + +G G FG +V + G+ A K+ D I +V+ E ++ L H
Sbjct: 9 LTLEEIIGIGGFG--KVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLK-H 65
Query: 102 PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE- 160
PN++ L+ V E + LVME GG L +R+ R +Q+ + + Y H+
Sbjct: 66 PNIIALRGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPDILVNWAVQIARGMNYLHDE 124
Query: 161 --IGVVHRDLKPENILLATKA-----SSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAP 213
+ ++HRDLK NIL+ K S+ +K+ DFGLA + + G+ ++AP
Sbjct: 125 AIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH-RTTKMSAAGAYAWMAP 183
Query: 214 EVL-AGGYNQAADVWSAGVILYILLSGMPPFWG 245
EV+ A +++ +DVWS GV+L+ LL+G PF G
Sbjct: 184 EVIRASMFSKGSDVWSYGVLLWELLTGEVPFRG 216
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 133/309 (43%), Gaps = 57/309 (18%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G G++ D A K +++ +R+ + E+ +M +
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVN 119
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H N++ L V+ E+ V+LVMEL L ++ L Q++
Sbjct: 120 HKNIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLCQVIQM--ELDHERMSYLLYQMLCG 176
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT--VGSPFYIA 212
+ + H G++HRDLKP NI++ + + +K+ DFGLA G S + T V + +Y A
Sbjct: 177 IKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLAR--TAGTSFMMTPYVVTRYYRA 231
Query: 213 PEVLAG-GYNQAADVWSAGVIL------YILLSG-----------------MPPFWGNTK 248
PEV+ G GY + D+WS G I+ IL G P F +
Sbjct: 232 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 291
Query: 249 SRIFDAV----RTADLRFPSNPWDHI-----------SDSAKDLVMGMLSTDPSQRLTAR 293
+ + V + A L FP D + + A+DL+ ML DP++R++
Sbjct: 292 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 351
Query: 294 QVLDHSWMG 302
L H ++
Sbjct: 352 DALQHPYIN 360
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 141/298 (47%), Gaps = 44/298 (14%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKF-TGEVFACKSIAKDRL---VTIDDERSVKLEIEIM 95
R+R LG+ LG G FG + + +D F + C+++A L T + R++ E++I+
Sbjct: 28 RDRLKLGKPLGRGAFGQV-IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL 86
Query: 96 TRLSGHPNVVDL-KAVYEDEDYVHLVMELCAGGELFHRLE----KFGRFSEAEARVL--F 148
+ H NVV+L A + + +++E C G L L +F + EA + F
Sbjct: 87 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDF 146
Query: 149 MQLMQVVLYCHEIG----------VVHRDLKPENILLATKASSSPIKLADFGLA--TYIE 196
+ L ++ Y ++ +HRDL NILL+ K + +K+ DFGLA Y +
Sbjct: 147 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK---NVVKICDFGLARDIYKD 203
Query: 197 PGQSLLGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWG-----NTK 248
P G P ++APE + Y +DVWS GV+L+ + S G P+ G
Sbjct: 204 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 263
Query: 249 SRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQ 306
R+ + R +R P D+ + ++ +PSQR T ++++H +G+ +Q
Sbjct: 264 RRLKEGTR---MRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH--LGNLLQ 312
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 128/275 (46%), Gaps = 32/275 (11%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+++G G+FG + C + G ++A K K ++D++ +++ E+ L H +VV
Sbjct: 13 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALR-EVYAHAVLGQHSHVVR 71
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGR----FSEAEARVLFMQLMQVVLYCHEIG 162
+ + ++D++ + E C GG L + + R F EAE + L +Q+ + + Y H +
Sbjct: 72 YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS 131
Query: 163 VVHRDLKPENILLATKA--------------SSSPI--KLADFGLATYIEPGQSLLGTVG 206
+VH D+KP NI ++ + +S+ + K+ D G T I Q G
Sbjct: 132 LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV---EEG 188
Query: 207 SPFYIAPEVLAGGYNQ--AADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPS 264
++A EVL Y AD+++ + + + +G P N + +R R P
Sbjct: 189 DSRFLANEVLQENYTHLPKADIFALALTV-VXAAGAEPLPRNGDQ--WHEIRQG--RLPR 243
Query: 265 NPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHS 299
P +S +L+ M+ DP +R +A ++ HS
Sbjct: 244 IP-QVLSQEFTELLKVMIHPDPERRPSAMALVKHS 277
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 18/203 (8%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDL 107
+LG G FG + DK TG F C ++ K RL E E+ LS P +V L
Sbjct: 79 RLGRGSFGEVHRMKDKQTG--FQC-AVKKVRLEVFRVE-----ELVACAGLSS-PRIVPL 129
Query: 108 KAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRD 167
+ +V++ MEL GG L +++ G E A Q ++ + Y H ++H D
Sbjct: 130 YGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGD 189
Query: 168 LKPENILLATKASSSPIKLADFGLATYIEP---GQSLLG---TVGSPFYIAPEVLAGGYN 221
+K +N+LL++ S + L DFG A ++P G+SLL G+ ++APEV+ G
Sbjct: 190 VKADNVLLSSDGSRA--ALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC 247
Query: 222 QA-ADVWSAGVILYILLSGMPPF 243
A D+WS+ ++ +L+G P+
Sbjct: 248 DAKVDIWSSCCMMLHMLNGCHPW 270
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 128/275 (46%), Gaps = 32/275 (11%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+++G G+FG + C + G ++A K K ++D++ +++ E+ L H +VV
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALR-EVYAHAVLGQHSHVVR 73
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGR----FSEAEARVLFMQLMQVVLYCHEIG 162
+ + ++D++ + E C GG L + + R F EAE + L +Q+ + + Y H +
Sbjct: 74 YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS 133
Query: 163 VVHRDLKPENILLATKA--------------SSSPI--KLADFGLATYIEPGQSLLGTVG 206
+VH D+KP NI ++ + +S+ + K+ D G T I Q G
Sbjct: 134 LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV---EEG 190
Query: 207 SPFYIAPEVLAGGYNQ--AADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPS 264
++A EVL Y AD+++ + + + +G P N + +R R P
Sbjct: 191 DSRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQ--WHEIRQG--RLPR 245
Query: 265 NPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHS 299
P +S +L+ M+ DP +R +A ++ HS
Sbjct: 246 IP-QVLSQEFTELLKVMIHPDPERRPSAMALVKHS 279
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 132/304 (43%), Gaps = 49/304 (16%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+ +G G +GV+ + TG+ A K I V + +R+++ E++I+ H N++
Sbjct: 60 ETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR-ELKILKHFK-HDNIIA 117
Query: 107 LKAV------YEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
+K + Y + V++V++L +L + + R QL++ + Y H
Sbjct: 118 IKDILRPTVPYGEFKSVYVVLDLMES-DLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHS 176
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYI--EPGQS---LLGTVGSPFYIAPEV 215
V+HRDLKP N+L+ +K+ DFG+A + P + + V + +Y APE+
Sbjct: 177 AQVIHRDLKPSNLLVNENCE---LKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPEL 233
Query: 216 LAG--GYNQAADVWSAGVILYILLSGMPPFWGNT------------------------KS 249
+ Y QA D+WS G I +L+ F G
Sbjct: 234 MLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAE 293
Query: 250 RIFDAVRTADLRFPSNPWDHISDSAK----DLVMGMLSTDPSQRLTARQVLDHSWMGDGI 305
R+ +++ R P PW+ + A L+ ML +PS R++A L H ++
Sbjct: 294 RVRAYIQSLPPRQPV-PWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAK-Y 351
Query: 306 QDPE 309
DP+
Sbjct: 352 HDPD 355
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 135/311 (43%), Gaps = 61/311 (19%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G G++ D A K +++ +R+ + E+ +M ++
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVN- 81
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARV--LFMQLM 152
H N++ L V+ E+ V+LVMEL L + + R+ L Q++
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-----LXQVIQMELDHERMSYLLYQML 136
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT--VGSPFY 210
+ + H G++HRDLKP NI++ S +K+ DFGLA G S + T V + +Y
Sbjct: 137 XGIKHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 211 IAPEVLAG-GYNQAADVWSAGVIL------YILLSGM-----------------PPFWGN 246
APEV+ G GY + D+WS G I+ IL G P F
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 247 TKSRIFDAV----RTADLRFPSNPWDHI-----------SDSAKDLVMGMLSTDPSQRLT 291
+ + + V + A L FP D + + A+DL+ ML DP++R++
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 311
Query: 292 ARQVLDHSWMG 302
L H ++
Sbjct: 312 VDDALQHPYIN 322
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 128/275 (46%), Gaps = 32/275 (11%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+++G G+FG + C + G ++A K K ++D++ +++ E+ L H +VV
Sbjct: 15 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALR-EVYAHAVLGQHSHVVR 73
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGR----FSEAEARVLFMQLMQVVLYCHEIG 162
+ + ++D++ + E C GG L + + R F EAE + L +Q+ + + Y H +
Sbjct: 74 YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS 133
Query: 163 VVHRDLKPENILLATKA--------------SSSPI--KLADFGLATYIEPGQSLLGTVG 206
+VH D+KP NI ++ + +S+ + K+ D G T I Q G
Sbjct: 134 LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV---EEG 190
Query: 207 SPFYIAPEVLAGGYNQ--AADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPS 264
++A EVL Y AD+++ + + + +G P N + +R R P
Sbjct: 191 DSRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQ--WHEIRQG--RLPR 245
Query: 265 NPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHS 299
P +S +L+ M+ DP +R +A ++ HS
Sbjct: 246 IP-QVLSQEFTELLKVMIHPDPERRPSAMALVKHS 279
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 101/206 (49%), Gaps = 35/206 (16%)
Query: 116 YVHLVMELCAGGELFHRLEKFGRFSEAEARV---LFMQLMQVVLYCHEIGVVHRDLKPEN 172
Y+++ M+LC L + + + E V +F+Q+ + V + H G++HRDLKP N
Sbjct: 135 YLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSN 194
Query: 173 ILLATKASSSPIKLADFGLATYI---EPGQSLL----------GTVGSPFYIAPEVLAG- 218
I +K+ DFGL T + E Q++L G VG+ Y++PE + G
Sbjct: 195 IFFTM---DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGN 251
Query: 219 GYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFP-----SNPWDHISDS 273
Y+ D++S G+IL+ LL + RI VR +L+FP P +H+
Sbjct: 252 NYSHKVDIFSLGLILFELLYSFST--QMERVRIITDVR--NLKFPLLFTQKYPQEHM--- 304
Query: 274 AKDLVMGMLSTDPSQRLTARQVLDHS 299
+V MLS P++R A +++++
Sbjct: 305 ---MVQDMLSPSPTERPEATDIIENA 327
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 134/311 (43%), Gaps = 61/311 (19%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G G++ D A K +++ +R+ + E+ +M +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVN 81
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARV--LFMQLM 152
H N++ L V+ E+ V+LVMEL L + + R+ L Q++
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-----LXQVIQMELDHERMSYLLYQML 136
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT--VGSPFY 210
+ + H G++HRDLKP NI++ S +K+ DFGLA G S + T V + +Y
Sbjct: 137 XGIKHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 211 IAPEVLAG-GYNQAADVWSAGVIL------YILLSGM-----------------PPFWGN 246
APEV+ G GY + D+WS G I+ IL G P F
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 247 TKSRIFDAV----RTADLRFPSNPWDHI-----------SDSAKDLVMGMLSTDPSQRLT 291
+ + + V + A L FP D + + A+DL+ ML DP++R++
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 311
Query: 292 ARQVLDHSWMG 302
L H ++
Sbjct: 312 VDDALQHPYIN 322
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 128/275 (46%), Gaps = 32/275 (11%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+++G G+FG + C + G ++A K K ++D++ +++ E+ L H +VV
Sbjct: 17 EKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALR-EVYAHAVLGQHSHVVR 75
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGR----FSEAEARVLFMQLMQVVLYCHEIG 162
+ + ++D++ + E C GG L + + R F EAE + L +Q+ + + Y H +
Sbjct: 76 YFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS 135
Query: 163 VVHRDLKPENILLATKA--------------SSSPI--KLADFGLATYIEPGQSLLGTVG 206
+VH D+KP NI ++ + +S+ + K+ D G T I Q G
Sbjct: 136 LVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV---EEG 192
Query: 207 SPFYIAPEVLAGGYNQ--AADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPS 264
++A EVL Y AD+++ + + + +G P N + +R R P
Sbjct: 193 DSRFLANEVLQENYTHLPKADIFALALTV-VCAAGAEPLPRNGDQ--WHEIRQG--RLPR 247
Query: 265 NPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHS 299
P +S +L+ M+ DP +R +A ++ HS
Sbjct: 248 IP-QVLSQEFTELLKVMIHPDPERRPSAMALVKHS 281
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 18/203 (8%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDL 107
+LG G FG + DK TG F C ++ K RL E E+ L+ P +V L
Sbjct: 100 RLGRGSFGEVHRMEDKQTG--FQC-AVKKVRLEVFRAE-----ELMACAGLTS-PRIVPL 150
Query: 108 KAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRD 167
+ +V++ MEL GG L +++ G E A Q ++ + Y H ++H D
Sbjct: 151 YGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGD 210
Query: 168 LKPENILLATKASSSPIKLADFGLATYIEP---GQSLLG---TVGSPFYIAPEVLAG-GY 220
+K +N+LL++ S + L DFG A ++P G+SLL G+ ++APEV+ G
Sbjct: 211 VKADNVLLSSDGSHA--ALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSC 268
Query: 221 NQAADVWSAGVILYILLSGMPPF 243
+ DVWS+ ++ +L+G P+
Sbjct: 269 DAKVDVWSSCCMMLHMLNGCHPW 291
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 134/311 (43%), Gaps = 61/311 (19%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G G++ D A K +++ +R+ + E+ +M +
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVN 74
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARV--LFMQLM 152
H N++ L V+ E+ V+LVMEL L + + R+ L Q++
Sbjct: 75 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-----LXQVIQMELDHERMSYLLYQML 129
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT--VGSPFY 210
+ + H G++HRDLKP NI++ S +K+ DFGLA G S + T V + +Y
Sbjct: 130 XGIKHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYY 184
Query: 211 IAPEVLAG-GYNQAADVWSAGVIL------YILLSGM-----------------PPFWGN 246
APEV+ G GY + D+WS G I+ IL G P F
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 244
Query: 247 TKSRIFDAV----RTADLRFPSNPWDHI-----------SDSAKDLVMGMLSTDPSQRLT 291
+ + + V + A L FP D + + A+DL+ ML DP++R++
Sbjct: 245 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 304
Query: 292 ARQVLDHSWMG 302
L H ++
Sbjct: 305 VDDALQHPYIN 315
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 133/309 (43%), Gaps = 57/309 (18%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G G++ D A K +++ +R+ + E+ +M +
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVN 119
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H N++ L V+ E+ V+LVMEL L ++ L Q++
Sbjct: 120 HKNIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLCQVIQM--ELDHERMSYLLYQMLCG 176
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT--VGSPFYIA 212
+ + H G++HRDLKP NI++ + + +K+ DFGLA G S + T V + +Y A
Sbjct: 177 IKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLAR--TAGTSFMMTPYVVTRYYRA 231
Query: 213 PEVLAG-GYNQAADVWSAGVIL------YILLSGM-----------------PPFWGNTK 248
PEV+ G GY + D+WS G I+ IL G P F +
Sbjct: 232 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 291
Query: 249 SRIFDAV----RTADLRFPSNPWDHI-----------SDSAKDLVMGMLSTDPSQRLTAR 293
+ + V + A L FP D + + A+DL+ ML DP++R++
Sbjct: 292 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 351
Query: 294 QVLDHSWMG 302
L H ++
Sbjct: 352 DALQHPYIN 360
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 107/245 (43%), Gaps = 17/245 (6%)
Query: 42 RFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH 101
R+ + + +G G FG + D + A K + ++ R EI I+ L
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRF----HRQAAEEIRILEHLRKQ 153
Query: 102 P-----NVVDLKAVYEDEDYVHLVMELCAGG--ELFHRLEKFGRFSEAEARVLFMQLMQV 154
NV+ + + +++ + EL + EL + KF FS R ++Q
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKK-NKFQGFSLPLVRKFAHSILQC 212
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ H+ ++H DLKPENILL + S IK+ DFG + Y Q + + S FY APE
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSG-IKVIDFGSSCYEH--QRVYTXIQSRFYRAPE 269
Query: 215 VLAGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDS 273
V+ G Y D+WS G IL LL+G P G + A L PS S
Sbjct: 270 VILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQL-ACMIELLGMPSQKLLDASKR 328
Query: 274 AKDLV 278
AK+ V
Sbjct: 329 AKNFV 333
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 102/217 (47%), Gaps = 20/217 (9%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHP 102
++L LG G + K TG++FA K + D + E E++ +L+ H
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQM--REFEVLKKLN-HK 67
Query: 103 NVVDLKAVYEDEDYVH--LVMELCAGGELFHRLEK----FGRFSEAEARVLFMQLMQVVL 156
N+V L A+ E+ H L+ME C G L+ LE+ +G E+E ++ ++ +
Sbjct: 68 NIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG-LPESEFLIVLRDVVGGMN 126
Query: 157 YCHEIGVVHRDLKPENIL-LATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEV 215
+ E G+VHR++KP NI+ + + S KL DFG A +E + + G+ Y+ P++
Sbjct: 127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDM 186
Query: 216 LAGG---------YNQAADVWSAGVILYILLSGMPPF 243
Y D+WS GV Y +G PF
Sbjct: 187 YERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 107/245 (43%), Gaps = 17/245 (6%)
Query: 42 RFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH 101
R+ + + +G G FG + D + A K + ++ R EI I+ L
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRF----HRQAAEEIRILEHLRKQ 153
Query: 102 P-----NVVDLKAVYEDEDYVHLVMELCAGG--ELFHRLEKFGRFSEAEARVLFMQLMQV 154
NV+ + + +++ + EL + EL + KF FS R ++Q
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKK-NKFQGFSLPLVRKFAHSILQC 212
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ H+ ++H DLKPENILL + S IK+ DFG + Y Q + + S FY APE
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSG-IKVIDFGSSCYEH--QRVYTXIQSRFYRAPE 269
Query: 215 VLAGG-YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDS 273
V+ G Y D+WS G IL LL+G P G + A L PS S
Sbjct: 270 VILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQL-ACMIELLGMPSQKLLDASKR 328
Query: 274 AKDLV 278
AK+ V
Sbjct: 329 AKNFV 333
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 135/311 (43%), Gaps = 61/311 (19%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G G++ D A K +++ +R+ + E+ +M ++
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVN- 81
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARV--LFMQLM 152
H N++ L V+ E+ V+LVMEL L + + R+ L Q++
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-----LXQVIQMELDHERMSYLLYQML 136
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT--VGSPFY 210
+ + H G++HRDLKP NI++ S +K+ DFGLA G S + T V + +Y
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 211 IAPEVLAG-GYNQAADVWSAGVIL------YILLSGM-----------------PPFWGN 246
APEV+ G GY + D+WS G I+ IL G P F
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 247 TKSRIFDAV----RTADLRFPSNPWDHI-----------SDSAKDLVMGMLSTDPSQRLT 291
+ + + V + A L FP D + + A+DL+ ML DP++R++
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRIS 311
Query: 292 ARQVLDHSWMG 302
L H ++
Sbjct: 312 VDDALQHPYIN 322
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 18/203 (8%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDL 107
++G G FG + DK TG F C ++ K RL E E+ LS P +V L
Sbjct: 65 RVGRGSFGEVHRMKDKQTG--FQC-AVKKVRLEVFRVE-----ELVACAGLSS-PRIVPL 115
Query: 108 KAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRD 167
+ +V++ MEL GG L +++ G E A Q ++ + Y H ++H D
Sbjct: 116 YGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGD 175
Query: 168 LKPENILLATKASSSPIKLADFGLATYIEP---GQSLLG---TVGSPFYIAPEVLAGGYN 221
+K +N+LL++ S + L DFG A ++P G+SLL G+ ++APEV+ G
Sbjct: 176 VKADNVLLSSDGSRA--ALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC 233
Query: 222 QA-ADVWSAGVILYILLSGMPPF 243
A D+WS+ ++ +L+G P+
Sbjct: 234 DAKVDIWSSCCMMLHMLNGCHPW 256
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 104/218 (47%), Gaps = 22/218 (10%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKL-EIEIMTRLSGH 101
++L LG G + K TG++FA K + D V++ E E++ +L+ H
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVD---VQMREFEVLKKLN-H 66
Query: 102 PNVVDLKAVYEDEDYVH--LVMELCAGGELFHRLEK----FGRFSEAEARVLFMQLMQVV 155
N+V L A+ E+ H L+ME C G L+ LE+ +G E+E ++ ++ +
Sbjct: 67 KNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG-LPESEFLIVLRDVVGGM 125
Query: 156 LYCHEIGVVHRDLKPENIL-LATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ E G+VHR++KP NI+ + + S KL DFG A +E + + G+ Y+ P+
Sbjct: 126 NHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPD 185
Query: 215 VLAGG---------YNQAADVWSAGVILYILLSGMPPF 243
+ Y D+WS GV Y +G PF
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 133/309 (43%), Gaps = 57/309 (18%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G G++ D A K +++ +R+ + E+ +M +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVN 81
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H N++ L V+ E+ V+LVMEL L ++ L Q++
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLCQVIQM--ELDHERMSYLLYQMLCG 138
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT--VGSPFYIA 212
+ + H G++HRDLKP NI++ + + +K+ DFGLA G S + T V + +Y A
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLAR--TAGTSFMMTPYVVTRYYRA 193
Query: 213 PEVLAG-GYNQAADVWSAGVIL------YILLSGM-----------------PPFWGNTK 248
PEV+ G GY + D+WS G I+ IL G P F +
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 253
Query: 249 SRIFDAV----RTADLRFPSNPWDHI-----------SDSAKDLVMGMLSTDPSQRLTAR 293
+ + V + A L FP D + + A+DL+ ML DP++R++
Sbjct: 254 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 313
Query: 294 QVLDHSWMG 302
L H ++
Sbjct: 314 DALQHPYIN 322
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 133/309 (43%), Gaps = 57/309 (18%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G G++ D A K +++ +R+ + E+ +M +
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVN 82
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H N++ L V+ E+ V+LVMEL L ++ L Q++
Sbjct: 83 HKNIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLCQVIQM--ELDHERMSYLLYQMLCG 139
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT--VGSPFYIA 212
+ + H G++HRDLKP NI++ + + +K+ DFGLA G S + T V + +Y A
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLAR--TAGTSFMMTPYVVTRYYRA 194
Query: 213 PEVLAG-GYNQAADVWSAGVIL------YILLSGM-----------------PPFWGNTK 248
PEV+ G GY + D+WS G I+ IL G P F +
Sbjct: 195 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 254
Query: 249 SRIFDAV----RTADLRFPSNPWDHI-----------SDSAKDLVMGMLSTDPSQRLTAR 293
+ + V + A L FP D + + A+DL+ ML DP++R++
Sbjct: 255 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 314
Query: 294 QVLDHSWMG 302
L H ++
Sbjct: 315 DALQHPYIN 323
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 96/208 (46%), Gaps = 16/208 (7%)
Query: 42 RFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH 101
R+ + + +G G FG + D + A K + ++ R EI I+ L
Sbjct: 98 RYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRF----HRQAAEEIRILEHLRKQ 153
Query: 102 P-----NVVDLKAVYEDEDYVHLVMELCAGG--ELFHRLEKFGRFSEAEARVLFMQLMQV 154
NV+ + + +++ + EL + EL + KF FS R ++Q
Sbjct: 154 DKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKK-NKFQGFSLPLVRKFAHSILQC 212
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ H+ ++H DLKPENILL + S IK+ DFG + Y Q + + S FY APE
Sbjct: 213 LDALHKNRIIHCDLKPENILLKQQGRSG-IKVIDFGSSCYEH--QRVYXXIQSRFYRAPE 269
Query: 215 VLAGG-YNQAADVWSAGVILYILLSGMP 241
V+ G Y D+WS G IL LL+G P
Sbjct: 270 VILGARYGMPIDMWSLGCILAELLTGYP 297
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 61/311 (19%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G G++ D A K +++ +R+ + E+ +M ++
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KVVN 81
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARV--LFMQLM 152
H N++ L V+ E+ V++VMEL L + + R+ L Q++
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-----LSQVIQMELDHERMSYLLYQML 136
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT--VGSPFY 210
+ + H G++HRDLKP NI++ + A+ +K+ DFGLA G S + T V + +Y
Sbjct: 137 VGIKHLHSAGIIHRDLKPSNIVVKSDAT---LKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 211 IAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGNTK-------------------SR 250
APEV+ G GY + D+WS G I+ ++ G F G +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 251 IFDAVRT-----------------ADLRFPSNPWDH--ISDSAKDLVMGMLSTDPSQRLT 291
+ VRT D+ FP++ + + A+DL+ ML D S+R++
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 292 ARQVLDHSWMG 302
+ L H ++
Sbjct: 312 VDEALQHPYIN 322
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 133/309 (43%), Gaps = 57/309 (18%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G G++ D A K +++ +R+ + E+ +M +
Sbjct: 23 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVN 80
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H N++ L V+ E+ V+LVMEL L ++ L Q++
Sbjct: 81 HKNIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLCQVIQM--ELDHERMSYLLYQMLCG 137
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT--VGSPFYIA 212
+ + H G++HRDLKP NI++ + + +K+ DFGLA G S + T V + +Y A
Sbjct: 138 IKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLAR--TAGTSFMMTPYVVTRYYRA 192
Query: 213 PEVLAG-GYNQAADVWSAGVIL------YILLSGM-----------------PPFWGNTK 248
PEV+ G GY + D+WS G I+ IL G P F +
Sbjct: 193 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 252
Query: 249 SRIFDAV----RTADLRFPSNPWDHI-----------SDSAKDLVMGMLSTDPSQRLTAR 293
+ + V + A L FP D + + A+DL+ ML DP++R++
Sbjct: 253 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 312
Query: 294 QVLDHSWMG 302
L H ++
Sbjct: 313 DALQHPYIN 321
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 133/309 (43%), Gaps = 57/309 (18%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G G++ D A K +++ +R+ + E+ +M +
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVN 82
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H N++ L V+ E+ V+LVMEL L ++ L Q++
Sbjct: 83 HKNIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLCQVIQM--ELDHERMSYLLYQMLCG 139
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT--VGSPFYIA 212
+ + H G++HRDLKP NI++ + + +K+ DFGLA G S + T V + +Y A
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLAR--TAGTSFMMTPYVVTRYYRA 194
Query: 213 PEVLAG-GYNQAADVWSAGVIL------YILLSGM-----------------PPFWGNTK 248
PEV+ G GY + D+WS G I+ IL G P F +
Sbjct: 195 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 254
Query: 249 SRIFDAV----RTADLRFPSNPWDHI-----------SDSAKDLVMGMLSTDPSQRLTAR 293
+ + V + A L FP D + + A+DL+ ML DP++R++
Sbjct: 255 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 314
Query: 294 QVLDHSWMG 302
L H ++
Sbjct: 315 DALQHPYIN 323
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 133/309 (43%), Gaps = 57/309 (18%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G G++ D A K +++ +R+ + E+ +M +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVN 81
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H N++ L V+ E+ V+LVMEL L ++ L Q++
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLCQVIQM--ELDHERMSYLLYQMLCG 138
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT--VGSPFYIA 212
+ + H G++HRDLKP NI++ + + +K+ DFGLA G S + T V + +Y A
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLAR--TAGTSFMMTPYVVTRYYRA 193
Query: 213 PEVLAG-GYNQAADVWSAGVIL------YILLSGM-----------------PPFWGNTK 248
PEV+ G GY + D+WS G I+ IL G P F +
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 253
Query: 249 SRIFDAV----RTADLRFPSNPWDHI-----------SDSAKDLVMGMLSTDPSQRLTAR 293
+ + V + A L FP D + + A+DL+ ML DP++R++
Sbjct: 254 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 313
Query: 294 QVLDHSWMG 302
L H ++
Sbjct: 314 DALQHPYIN 322
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 123/273 (45%), Gaps = 31/273 (11%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDD--ERSVKLEIEIMTRLSGHPNVV 105
++G G +G + K +G++ A K I T+D+ ++ + ++++++ R S P +V
Sbjct: 29 EIGRGAYGSVNKMVHKPSGQIMAVKRIRS----TVDEKEQKQLLMDLDVVMRSSDCPYIV 84
Query: 106 DLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRF----------SEAEARVLFMQLMQVV 155
E + MEL + +KF ++ E ++ + +
Sbjct: 85 QFYGALFREGDCWICMELMSTS-----FDKFYKYVYSVLDDVIPEEILGKITLATVKALN 139
Query: 156 LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEV 215
+ ++HRD+KP NILL S IKL DFG++ + + G Y+APE
Sbjct: 140 HLKENLKIIHRDIKPSNILLD---RSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPER 196
Query: 216 L-----AGGYNQAADVWSAGVILYILLSGMPPF--WGNTKSRIFDAVRTADLRFPSNPWD 268
+ GY+ +DVWS G+ LY L +G P+ W + ++ V+ + ++
Sbjct: 197 IDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEER 256
Query: 269 HISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
S S + V L+ D S+R +++L H ++
Sbjct: 257 EFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 18/203 (8%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDL 107
++G G FG + DK TG F C ++ K RL E E+ LS P +V L
Sbjct: 81 RVGRGSFGEVHRMKDKQTG--FQC-AVKKVRLEVFRVE-----ELVACAGLSS-PRIVPL 131
Query: 108 KAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRD 167
+ +V++ MEL GG L +++ G E A Q ++ + Y H ++H D
Sbjct: 132 YGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGD 191
Query: 168 LKPENILLATKASSSPIKLADFGLATYIEP---GQSLLG---TVGSPFYIAPEVLAGGYN 221
+K +N+LL++ S + L DFG A ++P G+SLL G+ ++APEV+ G
Sbjct: 192 VKADNVLLSSDGSRA--ALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC 249
Query: 222 QA-ADVWSAGVILYILLSGMPPF 243
A D+WS+ ++ +L+G P+
Sbjct: 250 DAKVDIWSSCCMMLHMLNGCHPW 272
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 105/214 (49%), Gaps = 16/214 (7%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G FG + D+ E A K I K++ ++ ++E+ ++ ++
Sbjct: 35 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIK-IIKNKKAFLN---QAQIEVRLLELMNK 90
Query: 101 HPN-----VVDLKAVYEDEDYVHLVMELCAGGEL-FHRLEKFGRFSEAEARVLFMQLMQV 154
H +V LK + +++ LV E+ + R F S R Q+
Sbjct: 91 HDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTA 150
Query: 155 VLYCH--EIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIA 212
+L+ E+ ++H DLKPENILL S+ IK+ DFG + + GQ + + S FY +
Sbjct: 151 LLFLATPELSIIHCDLKPENILLCNPKRSA-IKIVDFGSSCQL--GQRIYQXIQSRFYRS 207
Query: 213 PEVLAGG-YNQAADVWSAGVILYILLSGMPPFWG 245
PEVL G Y+ A D+WS G IL + +G P F G
Sbjct: 208 PEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 241
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 133/309 (43%), Gaps = 57/309 (18%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G G++ D A K +++ +R+ + E+ +M +
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVN 75
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H N++ L V+ E+ V+LVMEL L ++ L Q++
Sbjct: 76 HKNIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLCQVIQM--ELDHERMSYLLYQMLCG 132
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT--VGSPFYIA 212
+ + H G++HRDLKP NI++ + + +K+ DFGLA G S + T V + +Y A
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLAR--TAGTSFMMTPYVVTRYYRA 187
Query: 213 PEVLAG-GYNQAADVWSAGVIL------YILLSGM-----------------PPFWGNTK 248
PEV+ G GY + D+WS G I+ IL G P F +
Sbjct: 188 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 247
Query: 249 SRIFDAV----RTADLRFPSNPWDHI-----------SDSAKDLVMGMLSTDPSQRLTAR 293
+ + V + A L FP D + + A+DL+ ML DP++R++
Sbjct: 248 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 307
Query: 294 QVLDHSWMG 302
L H ++
Sbjct: 308 DALQHPYIN 316
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 133/309 (43%), Gaps = 57/309 (18%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G G++ D A K +++ +R+ + E+ +M ++
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLMKXVN- 81
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H N++ L V+ E+ V+LVMEL L ++ L Q++
Sbjct: 82 HKNIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLCQVIQM--ELDHERMSYLLYQMLCG 138
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT--VGSPFYIA 212
+ + H G++HRDLKP NI++ S +K+ DFGLA G S + T V + +Y A
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVV---KSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYYRA 193
Query: 213 PEVLAG-GYNQAADVWSAGVIL------YILLSGM-----------------PPFWGNTK 248
PEV+ G GY + D+WS G I+ IL G P F +
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 253
Query: 249 SRIFDAV----RTADLRFPSNPWDHI-----------SDSAKDLVMGMLSTDPSQRLTAR 293
+ + V + A L FP D + + A+DL+ ML DP++R++
Sbjct: 254 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 313
Query: 294 QVLDHSWMG 302
L H ++
Sbjct: 314 DALQHPYIN 322
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 133/309 (43%), Gaps = 57/309 (18%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G G++ D A K +++ +R+ + E+ +M +
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVN 75
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H N++ L V+ E+ V+LVMEL L ++ L Q++
Sbjct: 76 HKNIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLCQVIQM--ELDHERMSYLLYQMLCG 132
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT--VGSPFYIA 212
+ + H G++HRDLKP NI++ + + +K+ DFGLA G S + T V + +Y A
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLAR--TAGTSFMMTPYVVTRYYRA 187
Query: 213 PEVLAG-GYNQAADVWSAGVIL------YILLSGM-----------------PPFWGNTK 248
PEV+ G GY + D+WS G I+ IL G P F +
Sbjct: 188 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 247
Query: 249 SRIFDAV----RTADLRFPSNPWDHI-----------SDSAKDLVMGMLSTDPSQRLTAR 293
+ + V + A L FP D + + A+DL+ ML DP++R++
Sbjct: 248 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 307
Query: 294 QVLDHSWMG 302
L H ++
Sbjct: 308 DALQHPYIN 316
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 61/311 (19%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G G++ D A K +++ +R+ + E+ +M ++
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KVVN 81
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARV--LFMQLM 152
H N++ L V+ E+ V++VMEL L + + R+ L Q++
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-----LSQVIQMELDHERMSYLLYQML 136
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT--VGSPFY 210
+ + H G++HRDLKP NI++ + A+ +K+ DFGLA G S + T V + +Y
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDAT---LKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 211 IAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGNTK-------------------SR 250
APEV+ G GY + D+WS G I+ ++ G F G +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 251 IFDAVRT-----------------ADLRFPSNPWDH--ISDSAKDLVMGMLSTDPSQRLT 291
+ VRT D+ FP++ + + A+DL+ ML D S+R++
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 292 ARQVLDHSWMG 302
+ L H ++
Sbjct: 312 VDEALQHPYIN 322
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 133/309 (43%), Gaps = 57/309 (18%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G G++ D A K +++ +R+ + E+ +M +
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVN 74
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H N++ L V+ E+ V+LVMEL L ++ L Q++
Sbjct: 75 HKNIISLLNVFTPQKTLEEFQDVYLVMEL-MDANLCQVIQM--ELDHERMSYLLYQMLCG 131
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT--VGSPFYIA 212
+ + H G++HRDLKP NI++ + + +K+ DFGLA G S + T V + +Y A
Sbjct: 132 IKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLAR--TAGTSFMMTPYVVTRYYRA 186
Query: 213 PEVLAG-GYNQAADVWSAGVIL------YILLSGM-----------------PPFWGNTK 248
PEV+ G GY + D+WS G I+ IL G P F +
Sbjct: 187 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 246
Query: 249 SRIFDAV----RTADLRFPSNPWDHI-----------SDSAKDLVMGMLSTDPSQRLTAR 293
+ + V + A L FP D + + A+DL+ ML DP++R++
Sbjct: 247 PTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVD 306
Query: 294 QVLDHSWMG 302
L H ++
Sbjct: 307 DALQHPYIN 315
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 107/234 (45%), Gaps = 43/234 (18%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G +G + DK V A K I + ID +R ++ EI I+ RL+
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILR-EIAILNRLN- 110
Query: 101 HPNVVDLKAVY-----EDEDYVHLVMELCAGGELFHRLEKFGRF-SEAEARVLFMQLMQV 154
H +VV + + E D +++V+E+ F +L + + +E + L L+
Sbjct: 111 HDHVVKVLDIVIPKDVEKFDELYVVLEIADSD--FKKLFRTPVYLTELHIKTLLYNLLVG 168
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLAT---YIEPGQS----------- 200
V Y H G++HRDLKP N L+ S +K+ DFGLA Y E G S
Sbjct: 169 VKYVHSAGILHRDLKPANCLVNQDCS---VKVCDFGLARTVDYPENGNSQLPISPREDDM 225
Query: 201 --------------LLGTVGSPFYIAPE--VLAGGYNQAADVWSAGVILYILLS 238
L G V + +Y APE +L Y +A DVWS G I LL+
Sbjct: 226 NLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 107/221 (48%), Gaps = 16/221 (7%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
R + +LG GQ+G + V K A K++ +D T++ E +K E +M +
Sbjct: 31 RTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKED---TMEVEEFLK-EAAVMKEIK 86
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVLY 157
HPN+V L V E ++V E G L L + R +L+M Q+ + Y
Sbjct: 87 -HPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEY 145
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ +HRDL N L+ + +K+ADFGL+ + G + G+ F + APE
Sbjct: 146 LEKKNFIHRDLAARNCLV---GENHVVKVADFGLSR-LMTGDTYTAHAGAKFPIKWTAPE 201
Query: 215 VLA-GGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIFD 253
LA ++ +DVW+ GV+L+ I GM P+ G S+++D
Sbjct: 202 SLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYD 242
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 101/211 (47%), Gaps = 10/211 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G FG + D+ E A K I + + V+L +E+M +
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRL-LELMNKHDT 112
Query: 101 HPN--VVDLKAVYEDEDYVHLVMELCAGGEL-FHRLEKFGRFSEAEARVLFMQLMQVVLY 157
+V LK + +++ LV E+ + R F S R Q+ +L+
Sbjct: 113 EMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLF 172
Query: 158 CH--EIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEV 215
E+ ++H DLKPENILL S+ IK+ DFG + + GQ + + S FY +PEV
Sbjct: 173 LATPELSIIHCDLKPENILLCNPKRSA-IKIVDFGSSCQL--GQRIYQXIQSRFYRSPEV 229
Query: 216 LAGG-YNQAADVWSAGVILYILLSGMPPFWG 245
L G Y+ A D+WS G IL + +G P F G
Sbjct: 230 LLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 260
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 18/203 (8%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDL 107
+LG G FG + DK TG F C ++ K RL E E+ L+ P +V L
Sbjct: 81 RLGRGSFGEVHRMEDKQTG--FQC-AVKKVRLEVFRAE-----ELMACAGLTS-PRIVPL 131
Query: 108 KAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRD 167
+ +V++ MEL GG L +++ G E A Q ++ + Y H ++H D
Sbjct: 132 YGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGD 191
Query: 168 LKPENILLATKASSSPIKLADFGLATYIEP---GQSLLG---TVGSPFYIAPEVLAG-GY 220
+K +N+LL++ S + L DFG A ++P G+ LL G+ ++APEV+ G
Sbjct: 192 VKADNVLLSSDGSHA--ALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSC 249
Query: 221 NQAADVWSAGVILYILLSGMPPF 243
+ DVWS+ ++ +L+G P+
Sbjct: 250 DAKVDVWSSCCMMLHMLNGCHPW 272
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 20/223 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
R + +LG GQFG + K A K++ +D T++ E +K E +M +
Sbjct: 10 RTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLK-EAAVMKEIK 65
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVLY 157
HPN+V L V E +++ E G L L + R + +L+M Q+ + Y
Sbjct: 66 -HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 124
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ +HRDL N L+ + +K+ADFGL+ + G + G+ F + APE
Sbjct: 125 LEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPE 180
Query: 215 VLAGGYNQ---AADVWSAGVILY-ILLSGMPPFWGNTKSRIFD 253
LA YN+ +DVW+ GV+L+ I GM P+ G S++++
Sbjct: 181 SLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYE 221
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 126/258 (48%), Gaps = 11/258 (4%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDL 107
+LG G GV+ S K +G V A K I + I ++ + E++++ + P +V
Sbjct: 32 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ--IIRELQVLHECNS-PYIVGF 88
Query: 108 KAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEI-GVVHR 166
+ + + + ME GG L L+K GR E + + +++ + Y E ++HR
Sbjct: 89 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 148
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAG-GYNQAAD 225
D+KP NIL+ ++ IKL DFG++ + + VG+ Y++PE L G Y+ +D
Sbjct: 149 DVKPSNILVNSRGE---IKLCDFGVSGQLIDSMA-NSFVGTRSYMSPERLQGTHYSVQSD 204
Query: 226 VWSAGVILYILLSGMPPFW-GNTKSRIFDAV-RTADLRFPSNPWDHISDSAKDLVMGMLS 283
+WS G+ L + G P G+ IF+ + + P P S +D V L
Sbjct: 205 IWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLI 264
Query: 284 TDPSQRLTARQVLDHSWM 301
+P++R +Q++ H+++
Sbjct: 265 KNPAERADLKQLMVHAFI 282
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 137/311 (44%), Gaps = 61/311 (19%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G G++ D A K +++ +R+ + E+ +M +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVN 81
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARV--LFMQLM 152
H N++ L V+ E+ V++VMEL L + + R+ L Q++
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-----LSQVIQMELDHERMSYLLYQML 136
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT--VGSPFY 210
+ + H G++HRDLKP NI++ + A+ +K+ DFGLA G S + T V + +Y
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDAT---LKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 211 IAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGNTK-------------------SR 250
APEV+ G GY + D+WS G I+ ++ G F G +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 251 IFDAVRT-----------------ADLRFPSNPWDH--ISDSAKDLVMGMLSTDPSQRLT 291
+ VRT D+ FP++ + + A+DL+ ML D S+R++
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 292 ARQVLDHSWMG 302
+ L H ++
Sbjct: 312 VDEALQHPYIN 322
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 38/199 (19%)
Query: 139 FSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPG 198
++ + R +L++ + YCH G++HRD+KP N+++ + ++L D+GLA + P
Sbjct: 129 LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKK--LRLIDWGLAEFYHPA 186
Query: 199 QSLLGTVGSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGNTKS-----RI 251
Q V S ++ PE+L Y+ + D+WS G +L ++ PF+ + RI
Sbjct: 187 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRI 246
Query: 252 FDAVRTADL--------------------RFPSNPWDH---------ISDSAKDLVMGML 282
+ T +L + W++ +S A DL+ +L
Sbjct: 247 AKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLL 306
Query: 283 STDPSQRLTARQVLDHSWM 301
D QRLTA++ ++H +
Sbjct: 307 RYDHQQRLTAKEAMEHPYF 325
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 140/298 (46%), Gaps = 44/298 (14%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKF-TGEVFACKSIAKDRL---VTIDDERSVKLEIEIM 95
R+R LG+ LG G FG + + +D F + C+++A L T + R++ E++I+
Sbjct: 26 RDRLKLGKPLGRGAFGQV-IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL 84
Query: 96 TRLSGHPNVVDL-KAVYEDEDYVHLVMELCAGGELFHRLE----KFGRFSEAEARVL--F 148
+ H NVV+L A + + +++E C G L L +F + A + F
Sbjct: 85 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 144
Query: 149 MQLMQVVLYCHEIG----------VVHRDLKPENILLATKASSSPIKLADFGLA--TYIE 196
+ L ++ Y ++ +HRDL NILL+ K + +K+ DFGLA Y +
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK---NVVKICDFGLARDIYKD 201
Query: 197 PGQSLLGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWG-----NTK 248
P G P ++APE + Y +DVWS GV+L+ + S G P+ G
Sbjct: 202 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 261
Query: 249 SRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQ 306
R+ + R +R P D+ + ++ +PSQR T ++++H +G+ +Q
Sbjct: 262 RRLKEGTR---MRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH--LGNLLQ 310
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 91/199 (45%), Gaps = 38/199 (19%)
Query: 139 FSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPG 198
++ + R +L++ + YCH G++HRD+KP N+++ + ++L D+GLA + P
Sbjct: 134 LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQKK--LRLIDWGLAEFYHPA 191
Query: 199 QSLLGTVGSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGNTKS-----RI 251
Q V S ++ PE+L Y+ + D+WS G +L ++ PF+ + RI
Sbjct: 192 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRI 251
Query: 252 FDAVRTADL--------------------RFPSNPWDH---------ISDSAKDLVMGML 282
+ T +L + W++ +S A DL+ +L
Sbjct: 252 AKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLL 311
Query: 283 STDPSQRLTARQVLDHSWM 301
D QRLTA++ ++H +
Sbjct: 312 RYDHQQRLTAKEAMEHPYF 330
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 109/223 (48%), Gaps = 20/223 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
R + +LG GQ+G + K A K++ +D T++ E +K E +M +
Sbjct: 10 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLK-EAAVMKEIK 65
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVLY 157
HPN+V L V E ++++E G L L + R + +L+M Q+ + Y
Sbjct: 66 -HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 124
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ +HRDL N L+ + +K+ADFGL+ + G + G+ F + APE
Sbjct: 125 LEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPE 180
Query: 215 VLAGGYNQ---AADVWSAGVILY-ILLSGMPPFWGNTKSRIFD 253
LA YN+ +DVW+ GV+L+ I GM P+ G S++++
Sbjct: 181 SLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYE 221
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 126/326 (38%), Gaps = 68/326 (20%)
Query: 39 LRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRL 98
L R+ + LG G FG + C D G I K+ + RS EI+++ L
Sbjct: 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARS---EIQVLEHL 68
Query: 99 -SGHPN----VVDLKAVYEDEDYVHLVMELCAGGEL-FHRLEKFGRFSEAEARVLFMQLM 152
+ PN V + +E ++ +V EL F + F F R + Q+
Sbjct: 69 NTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQIC 128
Query: 153 QVVLYCHEIGVVHRDLKPENILLA----TKASSSP------------IKLADFGLATYIE 196
+ V + H + H DLKPENIL T+A + IK+ DFG ATY +
Sbjct: 129 KSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDD 188
Query: 197 PGQSLLGTVGSPFYIAPEV-LAGGYNQAADVWSAGVIL--YIL-------------LSGM 240
S L V + Y APEV LA G++Q DVWS G IL Y L L+ M
Sbjct: 189 EHHSTL--VSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMM 246
Query: 241 PPFWGNTKSRIFDAVRTAD-LRFPSNPWDHISDSAK------------------------ 275
G + R WD S + +
Sbjct: 247 ERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLF 306
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSWM 301
DL+ ML DP++R+T R+ L H +
Sbjct: 307 DLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 140/298 (46%), Gaps = 44/298 (14%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKF-TGEVFACKSIAKDRL---VTIDDERSVKLEIEIM 95
R+R LG+ LG G FG + + +D F + C+++A L T + R++ E++I+
Sbjct: 26 RDRLKLGKPLGRGAFGQV-IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL 84
Query: 96 TRLSGHPNVVDL-KAVYEDEDYVHLVMELCAGGELFHRLE----KFGRFSEAEARVL--F 148
+ H NVV+L A + + +++E C G L L +F + A + F
Sbjct: 85 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 144
Query: 149 MQLMQVVLYCHEIG----------VVHRDLKPENILLATKASSSPIKLADFGLA--TYIE 196
+ L ++ Y ++ +HRDL NILL+ K + +K+ DFGLA Y +
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK---NVVKICDFGLARDIYKD 201
Query: 197 PGQSLLGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWG-----NTK 248
P G P ++APE + Y +DVWS GV+L+ + S G P+ G
Sbjct: 202 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 261
Query: 249 SRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQ 306
R+ + R +R P D+ + ++ +PSQR T ++++H +G+ +Q
Sbjct: 262 RRLKEGTR---MRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH--LGNLLQ 310
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 130/265 (49%), Gaps = 19/265 (7%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDL 107
+LG G GV+ S K +G V A K I + I ++ + E++++ + P +V
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ--IIRELQVLHECNS-PYIVGF 69
Query: 108 KAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEI-GVVHR 166
+ + + + ME GG L L+K GR E + + +++ + Y E ++HR
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT-VGSPFYIAPEVLAG-GYNQAA 224
D+KP NIL+ ++ IKL DFG++ + S+ + VG+ Y++PE L G Y+ +
Sbjct: 130 DVKPSNILVNSRGE---IKLCDFGVSGQLI--DSMANSFVGTRSYMSPERLQGTHYSVQS 184
Query: 225 DVWSAGVILYILLSG---MPPFWGNTKSR----IFDAV-RTADLRFPSNPWDHISDSAKD 276
D+WS G+ L + G +PP SR IF+ + + P P S +D
Sbjct: 185 DIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQD 244
Query: 277 LVMGMLSTDPSQRLTARQVLDHSWM 301
V L +P++R +Q++ H+++
Sbjct: 245 FVNKCLIKNPAERADLKQLMVHAFI 269
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 20/223 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
R + +LG GQ+G + K A K++ +D T++ E +K E +M +
Sbjct: 10 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLK-EAAVMKEIK 65
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVLY 157
HPN+V L V E +++ E G L L + R + +L+M Q+ + Y
Sbjct: 66 -HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 124
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ +HRDL N L+ + +K+ADFGL+ + G + G+ F + APE
Sbjct: 125 LEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTFTAHAGAKFPIKWTAPE 180
Query: 215 VLAGGYNQ---AADVWSAGVILY-ILLSGMPPFWGNTKSRIFD 253
LA YN+ +DVW+ GV+L+ I GM P+ G S++++
Sbjct: 181 SLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYE 221
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 109/223 (48%), Gaps = 20/223 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
R + +LG GQ+G + K A K++ +D T++ E +K E +M +
Sbjct: 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLK-EAAVMKEIK 67
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVLY 157
HPN+V L V E ++++E G L L + R + +L+M Q+ + Y
Sbjct: 68 -HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 126
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ +HRDL N L+ + +K+ADFGL+ + G + G+ F + APE
Sbjct: 127 LEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPE 182
Query: 215 VLAGGYNQ---AADVWSAGVILY-ILLSGMPPFWGNTKSRIFD 253
LA YN+ +DVW+ GV+L+ I GM P+ G S++++
Sbjct: 183 SLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 223
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 140/298 (46%), Gaps = 44/298 (14%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKF-TGEVFACKSIAKDRL---VTIDDERSVKLEIEIM 95
R+R LG+ LG G FG + + +D F + C+++A L T + R++ E++I+
Sbjct: 63 RDRLKLGKPLGRGAFGQV-IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL 121
Query: 96 TRLSGHPNVVDL-KAVYEDEDYVHLVMELCAGGELFHRLE----KFGRFSEAEARVL--F 148
+ H NVV+L A + + +++E C G L L +F + A + F
Sbjct: 122 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 181
Query: 149 MQLMQVVLYCHEIG----------VVHRDLKPENILLATKASSSPIKLADFGLA--TYIE 196
+ L ++ Y ++ +HRDL NILL+ K + +K+ DFGLA Y +
Sbjct: 182 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK---NVVKICDFGLARDIYKD 238
Query: 197 PGQSLLGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWG-----NTK 248
P G P ++APE + Y +DVWS GV+L+ + S G P+ G
Sbjct: 239 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 298
Query: 249 SRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQ 306
R+ + R +R P D+ + ++ +PSQR T ++++H +G+ +Q
Sbjct: 299 RRLKEGTR---MRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH--LGNLLQ 347
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 109/223 (48%), Gaps = 20/223 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
R + +LG GQ+G + K A K++ +D T++ E +K E +M +
Sbjct: 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLK-EAAVMKEIK 67
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVLY 157
HPN+V L V E ++++E G L L + R + +L+M Q+ + Y
Sbjct: 68 -HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 126
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ +HRDL N L+ + +K+ADFGL+ + G + G+ F + APE
Sbjct: 127 LEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPE 182
Query: 215 VLAGGYNQ---AADVWSAGVILY-ILLSGMPPFWGNTKSRIFD 253
LA YN+ +DVW+ GV+L+ I GM P+ G S++++
Sbjct: 183 SLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 223
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 139/298 (46%), Gaps = 44/298 (14%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKF-TGEVFACKSIAKDRL---VTIDDERSVKLEIEIM 95
R+R LG+ LG G FG + + +D F + C+++A L T + R++ E++I+
Sbjct: 17 RDRLKLGKPLGRGAFGQV-IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL 75
Query: 96 TRLSGHPNVVDL-KAVYEDEDYVHLVMELCAGGELFHRLE----KFGRFSEAEARVL--F 148
+ H NVV+L A + + ++ E C G L L +F + A + F
Sbjct: 76 IHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 149 MQLMQVVLYCHEIG----------VVHRDLKPENILLATKASSSPIKLADFGLA--TYIE 196
+ L ++ Y ++ +HRDL NILL+ K + +K+ DFGLA Y +
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK---NVVKICDFGLARDIYKD 192
Query: 197 PGQSLLGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWG-----NTK 248
P G P ++APE + Y +DVWS GV+L+ + S G P+ G
Sbjct: 193 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 252
Query: 249 SRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQ 306
R+ + R +R P D+ + ++ +PSQR T ++++H +G+ +Q
Sbjct: 253 RRLKEGTR---MRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH--LGNLLQ 301
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 110/229 (48%), Gaps = 17/229 (7%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKL-EIEIMTRLSGHPNVVDL 107
+G G+FG + K G+ +C +I + + +R L E IM + HPN++ L
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFE-HPNIIRL 82
Query: 108 KAVYEDEDYVHLVMELCAGGEL--FHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVH 165
+ V + V ++ E G L F RL G+F+ + + + + Y E+ VH
Sbjct: 83 EGVVTNSMPVMILTEFMENGALDSFLRLND-GQFTVIQLVGMLRGIASGMRYLAEMSYVH 141
Query: 166 RDLKPENILLATKASSSPIKLADFGLATYIEPGQ------SLLGTVGSPFYIAPEVLA-G 218
RDL NIL+ S+ K++DFGL+ ++E S LG + APE +A
Sbjct: 142 RDLAARNILV---NSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFR 198
Query: 219 GYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFPSNP 266
+ A+D WS G++++ ++S G P+W + + +A+ D R P P
Sbjct: 199 KFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ-DYRLPPPP 246
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 100/211 (47%), Gaps = 10/211 (4%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G FG + D+ E A K I + + V+L +E+M +
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRL-LELMNKHDT 112
Query: 101 HPN--VVDLKAVYEDEDYVHLVMELCAGGEL-FHRLEKFGRFSEAEARVLFMQLMQVVLY 157
+V LK + +++ LV E+ + R F S R Q+ +L+
Sbjct: 113 EMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLF 172
Query: 158 CH--EIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEV 215
E+ ++H DLKPENILL + IK+ DFG + + GQ + + S FY +PEV
Sbjct: 173 LATPELSIIHCDLKPENILLCNPKRXA-IKIVDFGSSCQL--GQRIYQXIQSRFYRSPEV 229
Query: 216 LAGG-YNQAADVWSAGVILYILLSGMPPFWG 245
L G Y+ A D+WS G IL + +G P F G
Sbjct: 230 LLGMPYDLAIDMWSLGCILVEMHTGEPLFSG 260
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 139/298 (46%), Gaps = 44/298 (14%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKF-TGEVFACKSIAKDRL---VTIDDERSVKLEIEIM 95
R+R LG+ LG G FG + + +D F + C+++A L T + R++ E++I+
Sbjct: 17 RDRLKLGKPLGRGAFGQV-IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL 75
Query: 96 TRLSGHPNVVDL-KAVYEDEDYVHLVMELCAGGELFHRLE----KFGRFSEAEARVL--F 148
+ H NVV+L A + + ++ E C G L L +F + A + F
Sbjct: 76 IHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 149 MQLMQVVLYCHEIG----------VVHRDLKPENILLATKASSSPIKLADFGLA--TYIE 196
+ L ++ Y ++ +HRDL NILL+ K + +K+ DFGLA Y +
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK---NVVKICDFGLARDIYKD 192
Query: 197 PGQSLLGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWG-----NTK 248
P G P ++APE + Y +DVWS GV+L+ + S G P+ G
Sbjct: 193 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 252
Query: 249 SRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQ 306
R+ + R +R P D+ + ++ +PSQR T ++++H +G+ +Q
Sbjct: 253 RRLKEGTR---MRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH--LGNLLQ 301
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 20/223 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
R + +LG GQ+G + K A K++ +D T++ E +K E +M +
Sbjct: 17 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLK-EAAVMKEIK 72
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVLY 157
HPN+V L V E +++ E G L L + R + +L+M Q+ + Y
Sbjct: 73 -HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 131
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ +HRDL N L+ + +K+ADFGL+ + G + G+ F + APE
Sbjct: 132 LEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPE 187
Query: 215 VLAGGYNQ---AADVWSAGVILY-ILLSGMPPFWGNTKSRIFD 253
LA YN+ +DVW+ GV+L+ I GM P+ G S++++
Sbjct: 188 SLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 20/223 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
R + +LG GQ+G + K A K++ +D T++ E +K E +M +
Sbjct: 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLK-EAAVMKEIK 67
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVLY 157
HPN+V L V E +++ E G L L + R + +L+M Q+ + Y
Sbjct: 68 -HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 126
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ +HRDL N L+ + +K+ADFGL+ + G + G+ F + APE
Sbjct: 127 LEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPE 182
Query: 215 VLAGGYNQ---AADVWSAGVILY-ILLSGMPPFWGNTKSRIFD 253
LA YN+ +DVW+ GV+L+ I GM P+ G S++++
Sbjct: 183 SLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 223
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 123/258 (47%), Gaps = 15/258 (5%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDL 107
+LG G GV+ S K +G V A K I + I ++ + E++++ + P +V
Sbjct: 16 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ--IIRELQVLHECNS-PYIVGF 72
Query: 108 KAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEI-GVVHR 166
+ + + + ME GG L L+K GR E + + +++ + Y E ++HR
Sbjct: 73 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 132
Query: 167 DLKPENILLATKASSSPIKLADFGLATYI--EPGQSLLGTVGSPFYIAPEVLAG-GYNQA 223
D+KP NIL+ ++ IKL DFG++ + E +GT Y++PE L G Y+
Sbjct: 133 DVKPSNILVNSRGE---IKLCDFGVSGQLIDEMANEFVGTRS---YMSPERLQGTHYSVQ 186
Query: 224 ADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLS 283
+D+WS G+ L + G P + D + + P P S +D V L
Sbjct: 187 SDIWSMGLSLVEMAVGRYPRPPMAIFELLDYI--VNEPPPKLPSAVFSLEFQDFVNKCLI 244
Query: 284 TDPSQRLTARQVLDHSWM 301
+P++R +Q++ H+++
Sbjct: 245 KNPAERADLKQLMVHAFI 262
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 108/223 (48%), Gaps = 20/223 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
R + +LG GQ+G + K A K++ +D T++ E +K E +M +
Sbjct: 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLK-EAAVMKEIK 274
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVLY 157
HPN+V L V E +++ E G L L + R + +L+M Q+ + Y
Sbjct: 275 -HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 333
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ +HR+L N L+ + +K+ADFGL+ + G + G+ F + APE
Sbjct: 334 LEKKNFIHRNLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPE 389
Query: 215 VLAGGYNQ---AADVWSAGVILY-ILLSGMPPFWGNTKSRIFD 253
LA YN+ +DVW+ GV+L+ I GM P+ G S++++
Sbjct: 390 SLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 430
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 110/229 (48%), Gaps = 17/229 (7%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKL-EIEIMTRLSGHPNVVDL 107
+G G+FG + K G+ +C +I + + +R L E IM + HPN++ L
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFE-HPNIIRL 80
Query: 108 KAVYEDEDYVHLVMELCAGGEL--FHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVH 165
+ V + V ++ E G L F RL G+F+ + + + + Y E+ VH
Sbjct: 81 EGVVTNSMPVMILTEFMENGALDSFLRLND-GQFTVIQLVGMLRGIASGMRYLAEMSYVH 139
Query: 166 RDLKPENILLATKASSSPIKLADFGLATYIEPGQ------SLLGTVGSPFYIAPEVLA-G 218
RDL NIL+ S+ K++DFGL+ ++E S LG + APE +A
Sbjct: 140 RDLAARNILV---NSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFR 196
Query: 219 GYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFPSNP 266
+ A+D WS G++++ ++S G P+W + + +A+ D R P P
Sbjct: 197 KFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQ-DYRLPPPP 244
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 20/223 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
R + +LG GQ+G + K A K++ +D T++ E +K E +M +
Sbjct: 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLK-EAAVMKEIK 67
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVLY 157
HPN+V L V E +++ E G L L + R + +L+M Q+ + Y
Sbjct: 68 -HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 126
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ +HRDL N L+ + +K+ADFGL+ + G + G+ F + APE
Sbjct: 127 LEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPE 182
Query: 215 VLAGGYNQ---AADVWSAGVILY-ILLSGMPPFWGNTKSRIFD 253
LA YN+ +DVW+ GV+L+ I GM P+ G S++++
Sbjct: 183 SLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 223
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 132/307 (42%), Gaps = 53/307 (17%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G G++ D A K +++ +R+ + E+ +M +
Sbjct: 26 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVN 83
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H N++ L V+ E+ V++VMEL L ++ L Q++
Sbjct: 84 HKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLCQVIQM--ELDHERMSYLLYQMLCG 140
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ + H G++HRDLKP NI++ + + +K+ DFGLA ++ V + +Y APE
Sbjct: 141 IKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLARTAGTSFMMVPFVVTRYYRAPE 197
Query: 215 VLAG-GYNQAADVWSAGVILYILLSGMPPFWGNTK-------------------SRIFDA 254
V+ G GY + D+WS G I+ ++ G F G ++
Sbjct: 198 VILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT 257
Query: 255 VRT-----------------ADLRFPSNPWDH--ISDSAKDLVMGMLSTDPSQRLTARQV 295
VRT D+ FP++ + + A+DL+ ML D S+R++ +
Sbjct: 258 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 317
Query: 296 LDHSWMG 302
L H ++
Sbjct: 318 LQHPYIN 324
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 134/309 (43%), Gaps = 57/309 (18%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G G++ D A K +++ +R+ + E+ +M +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVN 81
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H N++ L V+ E+ V++VMEL L ++ L Q++
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLCQVIQM--ELDHERMSYLLYQMLCG 138
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT--VGSPFYIA 212
+ + H G++HRDLKP NI++ + + +K+ DFGLA G S + T V + +Y A
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLAR--TAGTSFMMTPEVVTRYYRA 193
Query: 213 PEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGNTK-------------------SRIF 252
PEV+ G GY + D+WS G I+ ++ G F G ++
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 253
Query: 253 DAVRT-----------------ADLRFPSNPWDHI--SDSAKDLVMGMLSTDPSQRLTAR 293
VRT D+ FP++ + + A+DL+ ML D S+R++
Sbjct: 254 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRISVD 313
Query: 294 QVLDHSWMG 302
+ L H ++
Sbjct: 314 EALQHPYIN 322
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 125/326 (38%), Gaps = 68/326 (20%)
Query: 39 LRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRL 98
L R+ + LG G FG + C D G I K+ + RS EI+++ L
Sbjct: 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARS---EIQVLEHL 68
Query: 99 -SGHPN----VVDLKAVYEDEDYVHLVMELCAGGEL-FHRLEKFGRFSEAEARVLFMQLM 152
+ PN V + +E ++ +V EL F + F F R + Q+
Sbjct: 69 NTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQIC 128
Query: 153 QVVLYCHEIGVVHRDLKPENILLA----TKASSSP------------IKLADFGLATYIE 196
+ V + H + H DLKPENIL T+A + IK+ DFG ATY +
Sbjct: 129 KSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDD 188
Query: 197 PGQSLLGTVGSPFYIAPEV-LAGGYNQAADVWSAGVIL--YIL-------------LSGM 240
S L V Y APEV LA G++Q DVWS G IL Y L L+ M
Sbjct: 189 EHHSTL--VXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMM 246
Query: 241 PPFWGNTKSRIFDAVRTAD-LRFPSNPWDHISDSAK------------------------ 275
G + R WD S + +
Sbjct: 247 ERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLF 306
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSWM 301
DL+ ML DP++R+T R+ L H +
Sbjct: 307 DLIQKMLEYDPAKRITLREALKHPFF 332
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 20/223 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
R + +LG GQ+G + K A K++ +D T++ E +K E +M +
Sbjct: 17 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLK-EAAVMKEIK 72
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVLY 157
HPN+V L V E ++++E G L L + R +L+M Q+ + Y
Sbjct: 73 -HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 131
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ +HRDL N L+ + +K+ADFGL+ + G + G+ F + APE
Sbjct: 132 LEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPE 187
Query: 215 VLAGGYNQ---AADVWSAGVILY-ILLSGMPPFWGNTKSRIFD 253
LA YN+ +DVW+ GV+L+ I GM P+ G S++++
Sbjct: 188 SLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 108/223 (48%), Gaps = 20/223 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
R + +LG GQ+G + K A K++ +D T++ E +K E +M +
Sbjct: 13 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLK-EAAVMKEIK 68
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVLY 157
HPN+V L V E ++++E G L L + R +L+M Q+ + Y
Sbjct: 69 -HPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 127
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ +HRDL N L+ + +K+ADFGL+ + G + G+ F + APE
Sbjct: 128 LEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPE 183
Query: 215 VLAGGYNQ---AADVWSAGVILY-ILLSGMPPFWGNTKSRIFD 253
LA YN+ +DVW+ GV+L+ I GM P+ G S++++
Sbjct: 184 SLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 224
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 136/311 (43%), Gaps = 61/311 (19%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G G++ D A K +++ +R+ + E+ +M +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVN 81
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARV--LFMQLM 152
H N++ L V+ E+ V++VMEL L + + R+ L Q++
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-----LSQVIQMELDHERMSYLLYQML 136
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT--VGSPFY 210
+ + H G++HRDLKP NI++ + + +K+ DFGLA G S + T V + +Y
Sbjct: 137 CGIKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 211 IAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGNTK-------------------SR 250
APEV+ G GY + D+WS G I+ ++ G F G +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKK 251
Query: 251 IFDAVRT-----------------ADLRFPSNPWDH--ISDSAKDLVMGMLSTDPSQRLT 291
+ VRT D+ FP++ + + A+DL+ ML D S+R++
Sbjct: 252 LQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 292 ARQVLDHSWMG 302
+ L H ++
Sbjct: 312 VDEALQHPYIN 322
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 134/309 (43%), Gaps = 57/309 (18%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G G++ D A K +++ +R+ + E+ +M +
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVN 82
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H N++ L V+ E+ V++VMEL L ++ L Q++
Sbjct: 83 HKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLCQVIQM--ELDHERMSYLLYQMLCG 139
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT--VGSPFYIA 212
+ + H G++HRDLKP NI++ + + +K+ DFGLA G S + T V + +Y A
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLAR--TAGTSFMMTPYVVTRYYRA 194
Query: 213 PEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGNTK-------------------SRIF 252
PEV+ G GY + D+WS G I+ ++ G F G ++
Sbjct: 195 PEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 254
Query: 253 DAVRT-----------------ADLRFPSNPWDH--ISDSAKDLVMGMLSTDPSQRLTAR 293
VRT D+ FP++ + + A+DL+ ML D S+R++
Sbjct: 255 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD 314
Query: 294 QVLDHSWMG 302
+ L H ++
Sbjct: 315 EALQHPYIN 323
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 140/298 (46%), Gaps = 44/298 (14%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKF-TGEVFACKSIAKDRL---VTIDDERSVKLEIEIM 95
R+R LG+ LG G FG + + +D F + C+++A L T + R++ E++I+
Sbjct: 26 RDRLKLGKPLGRGAFGQV-IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL 84
Query: 96 TRLSGHPNVVDL-KAVYEDEDYVHLVMELCAGGELFHRLE----KFGRFSEAEARVL--F 148
+ H NVV+L A + + +++E C G L L +F + A + F
Sbjct: 85 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 144
Query: 149 MQLMQVVLYCHEIG----------VVHRDLKPENILLATKASSSPIKLADFGLATYI--E 196
+ L ++ Y ++ +HRDL NILL+ K + +K+ DFGLA I +
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK---NVVKICDFGLARDIXKD 201
Query: 197 PGQSLLGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWG-----NTK 248
P G P ++APE + Y +DVWS GV+L+ + S G P+ G
Sbjct: 202 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 261
Query: 249 SRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQ 306
R+ + R +R P D+ + ++ +PSQR T ++++H +G+ +Q
Sbjct: 262 RRLKEGTR---MRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH--LGNLLQ 310
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 99/220 (45%), Gaps = 23/220 (10%)
Query: 32 DTNQISNLRERFVLGQQLGWGQFGVIRVCS----DKFTGEVFACKSIAKDRLVTIDDERS 87
D Q +F+ QQLG G FG + +C TGEV A K + T + R
Sbjct: 10 DPTQFEERHLKFL--QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRD 64
Query: 88 VKLEIEIMTRLSGHPNVVDLKAV--YEDEDYVHLVMELCAGGELFHRLEKFG-RFSEAEA 144
+ EIEI+ L H N+V K V + L+ME G L L+K R +
Sbjct: 65 FEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 123
Query: 145 RVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT 204
Q+ + + Y +HRDL NIL+ + + +K+ DFGL T + P
Sbjct: 124 LQYTSQICKGMEYLGTKRYIHRDLATRNILVE---NENRVKIGDFGL-TKVLPQDKEXXK 179
Query: 205 VGSP-----FYIAPEVLA-GGYNQAADVWSAGVILYILLS 238
V P F+ APE L ++ A+DVWS GV+LY L +
Sbjct: 180 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 99/220 (45%), Gaps = 23/220 (10%)
Query: 32 DTNQISNLRERFVLGQQLGWGQFGVIRVCS----DKFTGEVFACKSIAKDRLVTIDDERS 87
D Q +F+ QQLG G FG + +C TGEV A K + T + R
Sbjct: 8 DPTQFEERHLKFL--QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRD 62
Query: 88 VKLEIEIMTRLSGHPNVVDLKAV--YEDEDYVHLVMELCAGGELFHRLEKFG-RFSEAEA 144
+ EIEI+ L H N+V K V + L+ME G L L+K R +
Sbjct: 63 FEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 121
Query: 145 RVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT 204
Q+ + + Y +HRDL NIL+ + + +K+ DFGL T + P
Sbjct: 122 LQYTSQICKGMEYLGTKRYIHRDLATRNILVE---NENRVKIGDFGL-TKVLPQDKEXXK 177
Query: 205 VGSP-----FYIAPEVLA-GGYNQAADVWSAGVILYILLS 238
V P F+ APE L ++ A+DVWS GV+LY L +
Sbjct: 178 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 99/220 (45%), Gaps = 23/220 (10%)
Query: 32 DTNQISNLRERFVLGQQLGWGQFGVIRVCS----DKFTGEVFACKSIAKDRLVTIDDERS 87
D Q +F+ QQLG G FG + +C TGEV A K + T + R
Sbjct: 6 DPTQFEERHLKFL--QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRD 60
Query: 88 VKLEIEIMTRLSGHPNVVDLKAV--YEDEDYVHLVMELCAGGELFHRLEKFG-RFSEAEA 144
+ EIEI+ L H N+V K V + L+ME G L L+K R +
Sbjct: 61 FEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 119
Query: 145 RVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT 204
Q+ + + Y +HRDL NIL+ + + +K+ DFGL T + P
Sbjct: 120 LQYTSQICKGMEYLGTKRYIHRDLATRNILVE---NENRVKIGDFGL-TKVLPQDKEXXK 175
Query: 205 VGSP-----FYIAPEVLA-GGYNQAADVWSAGVILYILLS 238
V P F+ APE L ++ A+DVWS GV+LY L +
Sbjct: 176 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 99/220 (45%), Gaps = 23/220 (10%)
Query: 32 DTNQISNLRERFVLGQQLGWGQFGVIRVCS----DKFTGEVFACKSIAKDRLVTIDDERS 87
D Q +F+ QQLG G FG + +C TGEV A K + T + R
Sbjct: 34 DPTQFEERHLKFL--QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRD 88
Query: 88 VKLEIEIMTRLSGHPNVVDLKAV--YEDEDYVHLVMELCAGGELFHRLEKFG-RFSEAEA 144
+ EIEI+ L H N+V K V + L+ME G L L+K R +
Sbjct: 89 FEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 147
Query: 145 RVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT 204
Q+ + + Y +HRDL NIL+ + + +K+ DFGL T + P
Sbjct: 148 LQYTSQICKGMEYLGTKRYIHRDLATRNILVE---NENRVKIGDFGL-TKVLPQDKEXXK 203
Query: 205 VGSP-----FYIAPEVLA-GGYNQAADVWSAGVILYILLS 238
V P F+ APE L ++ A+DVWS GV+LY L +
Sbjct: 204 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 140/298 (46%), Gaps = 44/298 (14%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKF-TGEVFACKSIAKDRL---VTIDDERSVKLEIEIM 95
R+R LG+ LG G FG + + +D F + C+++A L T + R++ E++I+
Sbjct: 17 RDRLKLGKPLGRGAFGQV-IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL 75
Query: 96 TRLSGHPNVVDL-KAVYEDEDYVHLVMELCAGGELFHRLE----KFGRFSEAEARVL--F 148
+ H NVV+L A + + +++E C G L L +F + A + F
Sbjct: 76 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 149 MQLMQVVLYCHEIG----------VVHRDLKPENILLATKASSSPIKLADFGLATYI--E 196
+ L ++ Y ++ +HRDL NILL+ K + +K+ DFGLA I +
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK---NVVKICDFGLARDIXKD 192
Query: 197 PGQSLLGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWG-----NTK 248
P G P ++APE + Y +DVWS GV+L+ + S G P+ G
Sbjct: 193 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 252
Query: 249 SRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQ 306
R+ + R +R P D+ + ++ +PSQR T ++++H +G+ +Q
Sbjct: 253 RRLKEGTR---MRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH--LGNLLQ 301
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 47 QQLGWGQFGVIRVCS----DKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHP 102
QQLG G FG + +C TGEV A K + T + R + EIEI+ L H
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQ-HD 70
Query: 103 NVVDLKAV--YEDEDYVHLVMELCAGGELFHRLEKFG-RFSEAEARVLFMQLMQVVLYCH 159
N+V K V + L+ME G L L+K R + Q+ + + Y
Sbjct: 71 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 130
Query: 160 EIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSP-----FYIAPE 214
+HRDL NIL+ + + +K+ DFGL T + P V P F+ APE
Sbjct: 131 TKRYIHRDLATRNILVE---NENRVKIGDFGL-TKVLPQDKEXXKVKEPGESPIFWYAPE 186
Query: 215 VLA-GGYNQAADVWSAGVILYILLS 238
L ++ A+DVWS GV+LY L +
Sbjct: 187 SLTESKFSVASDVWSFGVVLYELFT 211
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 20/223 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
R + +LG GQ+G + K A K++ +D T++ E +K E +M +
Sbjct: 17 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLK-EAAVMKEIK 72
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVLY 157
HPN+V L V E +++ E G L L + R +L+M Q+ + Y
Sbjct: 73 -HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 131
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ +HRDL N L+ + +K+ADFGL+ + G + G+ F + APE
Sbjct: 132 LEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPE 187
Query: 215 VLAGGYNQ---AADVWSAGVILY-ILLSGMPPFWGNTKSRIFD 253
LA YN+ +DVW+ GV+L+ I GM P+ G S++++
Sbjct: 188 SLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 99/220 (45%), Gaps = 23/220 (10%)
Query: 32 DTNQISNLRERFVLGQQLGWGQFGVIRVCS----DKFTGEVFACKSIAKDRLVTIDDERS 87
D Q +F+ QQLG G FG + +C TGEV A K + T + R
Sbjct: 3 DPTQFEERHLKFL--QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRD 57
Query: 88 VKLEIEIMTRLSGHPNVVDLKAV--YEDEDYVHLVMELCAGGELFHRLEKFG-RFSEAEA 144
+ EIEI+ L H N+V K V + L+ME G L L+K R +
Sbjct: 58 FEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 116
Query: 145 RVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT 204
Q+ + + Y +HRDL NIL+ + + +K+ DFGL T + P
Sbjct: 117 LQYTSQICKGMEYLGTKRYIHRDLATRNILVE---NENRVKIGDFGL-TKVLPQDKEFFK 172
Query: 205 VGSP-----FYIAPEVLA-GGYNQAADVWSAGVILYILLS 238
V P F+ APE L ++ A+DVWS GV+LY L +
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 99/220 (45%), Gaps = 23/220 (10%)
Query: 32 DTNQISNLRERFVLGQQLGWGQFGVIRVCS----DKFTGEVFACKSIAKDRLVTIDDERS 87
D Q +F+ QQLG G FG + +C TGEV A K + T + R
Sbjct: 3 DPTQFEERHLKFL--QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRD 57
Query: 88 VKLEIEIMTRLSGHPNVVDLKAV--YEDEDYVHLVMELCAGGELFHRLEKFG-RFSEAEA 144
+ EIEI+ L H N+V K V + L+ME G L L+K R +
Sbjct: 58 FEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 116
Query: 145 RVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT 204
Q+ + + Y +HRDL NIL+ + + +K+ DFGL T + P
Sbjct: 117 LQYTSQICKGMEYLGTKRYIHRDLATRNILVE---NENRVKIGDFGL-TKVLPQDKEXXK 172
Query: 205 VGSP-----FYIAPEVLA-GGYNQAADVWSAGVILYILLS 238
V P F+ APE L ++ A+DVWS GV+LY L +
Sbjct: 173 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 134/309 (43%), Gaps = 57/309 (18%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G G++ D A K +++ +R+ + E+ +M +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVN 81
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H N++ L V+ E+ V++VMEL L ++ L Q++
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLCQVIQM--ELDHERMSYLLYQMLCG 138
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT--VGSPFYIA 212
+ + H G++HRDLKP NI++ + + +K+ DFGLA G S + T V + +Y A
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLAR--TAGTSFMMTPYVVTRYYRA 193
Query: 213 PEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGNTK-------------------SRIF 252
PEV+ G GY + D+WS G I+ ++ G F G ++
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFMKKLQ 253
Query: 253 DAVRT-----------------ADLRFPSNPWDH--ISDSAKDLVMGMLSTDPSQRLTAR 293
VRT D+ FP++ + + A+DL+ ML D S+R++
Sbjct: 254 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD 313
Query: 294 QVLDHSWMG 302
+ L H ++
Sbjct: 314 EALQHPYIN 322
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 101/220 (45%), Gaps = 22/220 (10%)
Query: 33 TNQISNLRERFV-LGQQLGWGQFGVIRVCS----DKFTGEVFACKSIAKDRLVTIDDERS 87
++ ++ ER + QQLG G FG + +C TGEV A K + T + R
Sbjct: 19 SHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRD 75
Query: 88 VKLEIEIMTRLSGHPNVVDLKAV--YEDEDYVHLVMELCAGGELFHRLEKFG-RFSEAEA 144
+ EIEI+ L H N+V K V + L+ME G L L+K R +
Sbjct: 76 FEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 134
Query: 145 RVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT 204
Q+ + + Y +HRDL NIL+ + + +K+ DFGL T + P
Sbjct: 135 LQYTSQICKGMEYLGTKRYIHRDLATRNILVE---NENRVKIGDFGL-TKVLPQDKEXXK 190
Query: 205 VGSP-----FYIAPEVLA-GGYNQAADVWSAGVILYILLS 238
V P F+ APE L ++ A+DVWS GV+LY L +
Sbjct: 191 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 101/220 (45%), Gaps = 22/220 (10%)
Query: 33 TNQISNLRERFV-LGQQLGWGQFGVIRVCS----DKFTGEVFACKSIAKDRLVTIDDERS 87
++ ++ ER + QQLG G FG + +C TGEV A K + T + R
Sbjct: 19 SHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRD 75
Query: 88 VKLEIEIMTRLSGHPNVVDLKAV--YEDEDYVHLVMELCAGGELFHRLEKFG-RFSEAEA 144
+ EIEI+ L H N+V K V + L+ME G L L+K R +
Sbjct: 76 FEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 134
Query: 145 RVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT 204
Q+ + + Y +HRDL NIL+ + + +K+ DFGL T + P
Sbjct: 135 LQYTSQICKGMEYLGTKRYIHRDLATRNILVE---NENRVKIGDFGL-TKVLPQDKEXXK 190
Query: 205 VGSP-----FYIAPEVLA-GGYNQAADVWSAGVILYILLS 238
V P F+ APE L ++ A+DVWS GV+LY L +
Sbjct: 191 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 99/220 (45%), Gaps = 23/220 (10%)
Query: 32 DTNQISNLRERFVLGQQLGWGQFGVIRVCS----DKFTGEVFACKSIAKDRLVTIDDERS 87
D Q +F+ QQLG G FG + +C TGEV A K + T + R
Sbjct: 9 DPTQFEERHLKFL--QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRD 63
Query: 88 VKLEIEIMTRLSGHPNVVDLKAV--YEDEDYVHLVMELCAGGELFHRLEKFG-RFSEAEA 144
+ EIEI+ L H N+V K V + L+ME G L L+K R +
Sbjct: 64 FEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 122
Query: 145 RVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT 204
Q+ + + Y +HRDL NIL+ + + +K+ DFGL T + P
Sbjct: 123 LQYTSQICKGMEYLGTKRYIHRDLATRNILVE---NENRVKIGDFGL-TKVLPQDKEXXK 178
Query: 205 VGSP-----FYIAPEVLA-GGYNQAADVWSAGVILYILLS 238
V P F+ APE L ++ A+DVWS GV+LY L +
Sbjct: 179 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 47 QQLGWGQFGVIRVCS----DKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHP 102
QQLG G FG + +C TGEV A K + T + R + EIEI+ L H
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQ-HD 71
Query: 103 NVVDLKAV--YEDEDYVHLVMELCAGGELFHRLEKFG-RFSEAEARVLFMQLMQVVLYCH 159
N+V K V + L+ME G L L+K R + Q+ + + Y
Sbjct: 72 NIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG 131
Query: 160 EIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSP-----FYIAPE 214
+HRDL NIL+ + + +K+ DFGL T + P V P F+ APE
Sbjct: 132 TKRYIHRDLATRNILVE---NENRVKIGDFGL-TKVLPQDKEXXKVKEPGESPIFWYAPE 187
Query: 215 VLA-GGYNQAADVWSAGVILYILLS 238
L ++ A+DVWS GV+LY L +
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELFT 212
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 134/309 (43%), Gaps = 57/309 (18%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G G++ D A K +++ +R+ + E+ +M +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVN 81
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H N++ L V+ E+ V++VMEL L ++ L Q++
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLCQVIQM--ELDHERMSYLLYQMLCG 138
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT--VGSPFYIA 212
+ + H G++HRDLKP NI++ + + +K+ DFGLA G S + T V + +Y A
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLAR--TAGTSFMMTPYVVTRYYRA 193
Query: 213 PEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGNTK-------------------SRIF 252
PEV+ G GY + D+WS G I+ ++ G F G ++
Sbjct: 194 PEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 253
Query: 253 DAVRT-----------------ADLRFPSNPWDH--ISDSAKDLVMGMLSTDPSQRLTAR 293
VRT D+ FP++ + + A+DL+ ML D S+R++
Sbjct: 254 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD 313
Query: 294 QVLDHSWMG 302
+ L H ++
Sbjct: 314 EALQHPYIN 322
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 99/220 (45%), Gaps = 23/220 (10%)
Query: 32 DTNQISNLRERFVLGQQLGWGQFGVIRVCS----DKFTGEVFACKSIAKDRLVTIDDERS 87
D Q +F+ QQLG G FG + +C TGEV A K + T + R
Sbjct: 7 DPTQFEERHLKFL--QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRD 61
Query: 88 VKLEIEIMTRLSGHPNVVDLKAV--YEDEDYVHLVMELCAGGELFHRLEKFG-RFSEAEA 144
+ EIEI+ L H N+V K V + L+ME G L L+K R +
Sbjct: 62 FEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 120
Query: 145 RVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT 204
Q+ + + Y +HRDL NIL+ + + +K+ DFGL T + P
Sbjct: 121 LQYTSQICKGMEYLGTKRYIHRDLATRNILVE---NENRVKIGDFGL-TKVLPQDKEXXK 176
Query: 205 VGSP-----FYIAPEVLA-GGYNQAADVWSAGVILYILLS 238
V P F+ APE L ++ A+DVWS GV+LY L +
Sbjct: 177 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 99/220 (45%), Gaps = 23/220 (10%)
Query: 32 DTNQISNLRERFVLGQQLGWGQFGVIRVCS----DKFTGEVFACKSIAKDRLVTIDDERS 87
D Q +F+ QQLG G FG + +C TGEV A K + T + R
Sbjct: 1 DPTQFEERHLKFL--QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRD 55
Query: 88 VKLEIEIMTRLSGHPNVVDLKAV--YEDEDYVHLVMELCAGGELFHRLEKFG-RFSEAEA 144
+ EIEI+ L H N+V K V + L+ME G L L+K R +
Sbjct: 56 FEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 114
Query: 145 RVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT 204
Q+ + + Y +HRDL NIL+ + + +K+ DFGL T + P
Sbjct: 115 LQYTSQICKGMEYLGTKRYIHRDLATRNILVE---NENRVKIGDFGL-TKVLPQDKEXXK 170
Query: 205 VGSP-----FYIAPEVLA-GGYNQAADVWSAGVILYILLS 238
V P F+ APE L ++ A+DVWS GV+LY L +
Sbjct: 171 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 139/297 (46%), Gaps = 43/297 (14%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKF-TGEVFACKSIAKDRL---VTIDDERSVKLEIEIM 95
R+R LG+ LG G FG + + +D F + C+++A L T + R++ E++I+
Sbjct: 27 RDRLNLGKPLGRGAFGQV-IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL 85
Query: 96 TRLSGHPNVVDL-KAVYEDEDYVHLVMELCAGGELFHRLE----KFGRFSEAEARVL-FM 149
+ H NVV+L A + + +++E C G L L +F + E F+
Sbjct: 86 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFL 145
Query: 150 QLMQVVLYCHEIG----------VVHRDLKPENILLATKASSSPIKLADFGLATYI--EP 197
L ++ Y ++ +HRDL NILL+ K + +K+ DFGLA I +P
Sbjct: 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK---NVVKICDFGLARDIXKDP 202
Query: 198 GQSLLGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWG-----NTKS 249
G P ++APE + Y +DVWS GV+L+ + S G P+ G
Sbjct: 203 DXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 262
Query: 250 RIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQ 306
R+ + R +R P D+ + ++ +PSQR T ++++H +G+ +Q
Sbjct: 263 RLKEGTR---MRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH--LGNLLQ 310
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 28/210 (13%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDE--RSVKLEIEIMTRLSG 100
+ G+ LG G FG + + TGEV K L+ D+E R+ E+++M R
Sbjct: 12 LIHGEVLGKGCFGQAIKVTHRETGEVMVMKE-----LIRFDEETQRTFLKEVKVM-RCLE 65
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQ-LMQVVLYCH 159
HPNV+ V + ++ + E GG L ++ RV F + + + Y H
Sbjct: 66 HPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH 125
Query: 160 EIGVVHRDLKPENILLATKASSSPIKLADFGLA-------TYIEPGQSL--------LGT 204
+ ++HRDL N L+ + + +ADFGLA T E +SL
Sbjct: 126 SMNIIHRDLNSHNCLVRENKN---VVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTV 182
Query: 205 VGSPFYIAPEVLAG-GYNQAADVWSAGVIL 233
VG+P+++APE++ G Y++ DV+S G++L
Sbjct: 183 VGNPYWMAPEMINGRSYDEKVDVFSFGIVL 212
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 20/223 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
R + +LG GQ+G + K A K++ +D T++ E +K E +M +
Sbjct: 13 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLK-EAAVMKEIK 68
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVLY 157
HPN+V L V E +++ E G L L + R +L+M Q+ + Y
Sbjct: 69 -HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 127
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ +HRDL N L+ + +K+ADFGL+ + G + G+ F + APE
Sbjct: 128 LEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPE 183
Query: 215 VLAGGYNQ---AADVWSAGVILY-ILLSGMPPFWGNTKSRIFD 253
LA YN+ +DVW+ GV+L+ I GM P+ G S++++
Sbjct: 184 SLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 224
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 20/223 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
R + +LG GQ+G + K A K++ +D T++ E +K E +M +
Sbjct: 17 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLK-EAAVMKEIK 72
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVLY 157
HPN+V L V E +++ E G L L + R +L+M Q+ + Y
Sbjct: 73 -HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 131
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ +HRDL N L+ + +K+ADFGL+ + G + G+ F + APE
Sbjct: 132 LEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPE 187
Query: 215 VLAGGYNQ---AADVWSAGVILY-ILLSGMPPFWGNTKSRIFD 253
LA YN+ +DVW+ GV+L+ I GM P+ G S++++
Sbjct: 188 SLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 139/298 (46%), Gaps = 44/298 (14%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKF-TGEVFACKSIAKDRL---VTIDDERSVKLEIEIM 95
R+R LG+ LG G FG + + +D F + C+++A L T + R++ E++I+
Sbjct: 17 RDRLKLGKPLGRGAFGQV-IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL 75
Query: 96 TRLSGHPNVVDL-KAVYEDEDYVHLVMELCAGGELFHRLE----KFGRFSEAEARVL--F 148
+ H NVV+L A + + ++ E C G L L +F + A + F
Sbjct: 76 IHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDF 135
Query: 149 MQLMQVVLYCHEIG----------VVHRDLKPENILLATKASSSPIKLADFGLATYI--E 196
+ L ++ Y ++ +HRDL NILL+ K + +K+ DFGLA I +
Sbjct: 136 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK---NVVKICDFGLARDIXKD 192
Query: 197 PGQSLLGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWG-----NTK 248
P G P ++APE + Y +DVWS GV+L+ + S G P+ G
Sbjct: 193 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 252
Query: 249 SRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQ 306
R+ + R +R P D+ + ++ +PSQR T ++++H +G+ +Q
Sbjct: 253 RRLKEGTR---MRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH--LGNLLQ 301
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 20/223 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
R + +LG GQ+G + K A K++ +D T++ E +K E +M +
Sbjct: 14 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLK-EAAVMKEIK 69
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVLY 157
HPN+V L V E +++ E G L L + R +L+M Q+ + Y
Sbjct: 70 -HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 128
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ +HRDL N L+ + +K+ADFGL+ + G + G+ F + APE
Sbjct: 129 LEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPE 184
Query: 215 VLAGGYNQ---AADVWSAGVILY-ILLSGMPPFWGNTKSRIFD 253
LA YN+ +DVW+ GV+L+ I GM P+ G S++++
Sbjct: 185 SLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 225
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 20/223 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
R + +LG GQ+G + K A K++ +D T++ E +K E +M +
Sbjct: 14 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLK-EAAVMKEIK 69
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVLY 157
HPN+V L V E +++ E G L L + R +L+M Q+ + Y
Sbjct: 70 -HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 128
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ +HRDL N L+ + +K+ADFGL+ + G + G+ F + APE
Sbjct: 129 LEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPE 184
Query: 215 VLAGGYNQ---AADVWSAGVILY-ILLSGMPPFWGNTKSRIFD 253
LA YN+ +DVW+ GV+L+ I GM P+ G S++++
Sbjct: 185 SLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 225
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 20/223 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
R + +LG GQ+G + K A K++ +D T++ E +K E +M +
Sbjct: 16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLK-EAAVMKEIK 71
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVLY 157
HPN+V L V E +++ E G L L + R +L+M Q+ + Y
Sbjct: 72 -HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 130
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ +HRDL N L+ + +K+ADFGL+ + G + G+ F + APE
Sbjct: 131 LEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPE 186
Query: 215 VLAGGYNQ---AADVWSAGVILY-ILLSGMPPFWGNTKSRIFD 253
LA YN+ +DVW+ GV+L+ I GM P+ G S++++
Sbjct: 187 SLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 227
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 20/223 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
R + +LG GQ+G + K A K++ +D T++ E +K E +M +
Sbjct: 14 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLK-EAAVMKEIK 69
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVLY 157
HPN+V L V E +++ E G L L + R +L+M Q+ + Y
Sbjct: 70 -HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 128
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ +HRDL N L+ + +K+ADFGL+ + G + G+ F + APE
Sbjct: 129 LEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPE 184
Query: 215 VLAGGYNQ---AADVWSAGVILY-ILLSGMPPFWGNTKSRIFD 253
LA YN+ +DVW+ GV+L+ I GM P+ G S++++
Sbjct: 185 SLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 225
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 20/223 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
R + +LG GQ+G + K A K++ +D T++ E +K E +M +
Sbjct: 17 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLK-EAAVMKEIK 72
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVLY 157
HPN+V L V E +++ E G L L + R +L+M Q+ + Y
Sbjct: 73 -HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 131
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ +HRDL N L+ + +K+ADFGL+ + G + G+ F + APE
Sbjct: 132 LEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPE 187
Query: 215 VLAGGYNQ---AADVWSAGVILY-ILLSGMPPFWGNTKSRIFD 253
LA YN+ +DVW+ GV+L+ I GM P+ G S++++
Sbjct: 188 SLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 228
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 20/223 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
R + +LG GQ+G + K A K++ +D T++ E +K E +M +
Sbjct: 25 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLK-EAAVMKEIK 80
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVLY 157
HPN+V L V E +++ E G L L + R +L+M Q+ + Y
Sbjct: 81 -HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 139
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ +HRDL N L+ + +K+ADFGL+ + G + G+ F + APE
Sbjct: 140 LEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPE 195
Query: 215 VLAGGYNQ---AADVWSAGVILY-ILLSGMPPFWGNTKSRIFD 253
LA YN+ +DVW+ GV+L+ I GM P+ G S++++
Sbjct: 196 SLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 236
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 107/223 (47%), Gaps = 20/223 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
R + +LG GQ+G + K A K++ +D T++ E +K E +M +
Sbjct: 216 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLK-EAAVMKEIK 271
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVLY 157
HPN+V L V E +++ E G L L + R +L+M Q+ + Y
Sbjct: 272 -HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 330
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ +HR+L N L+ + +K+ADFGL+ + G + G+ F + APE
Sbjct: 331 LEKKNFIHRNLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPE 386
Query: 215 VLAGGYNQ---AADVWSAGVILY-ILLSGMPPFWGNTKSRIFD 253
LA YN+ +DVW+ GV+L+ I GM P+ G S++++
Sbjct: 387 SLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 427
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 107/223 (47%), Gaps = 20/223 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
R + +LG GQ+G + K A K++ +D T++ E +K E +M +
Sbjct: 258 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLK-EAAVMKEIK 313
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVLY 157
HPN+V L V E +++ E G L L + R +L+M Q+ + Y
Sbjct: 314 -HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 372
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ +HR+L N L+ + +K+ADFGL+ + G + G+ F + APE
Sbjct: 373 LEKKNFIHRNLAARNCLV---GENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPE 428
Query: 215 VLAGGYNQ---AADVWSAGVILY-ILLSGMPPFWGNTKSRIFD 253
LA YN+ +DVW+ GV+L+ I GM P+ G S++++
Sbjct: 429 SLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 469
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 121/259 (46%), Gaps = 21/259 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
RE L +LG G FG + + + T V A K++ T+ E ++ E ++M +L
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPG---TMSPEAFLQ-EAQVMKKLR 71
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-KFGRFSEAEARV-LFMQLMQVVLY 157
H +V L AV +E +++VME + G L L+ + G++ V + Q+ + Y
Sbjct: 72 -HEKLVQLYAVVSEEP-IYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ VHRDL+ NIL+ K+ADFGLA IE + G+ F + APE
Sbjct: 130 VERMNYVHRDLRAANILVGENLVC---KVADFGLARLIEDNE-YTARQGAKFPIKWTAPE 185
Query: 215 -VLAGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
L G + +DVWS G++L L + G P+ G + D V R P P +
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPP--ECPE 242
Query: 273 SAKDLVMGMLSTDPSQRLT 291
S DL+ DP +R T
Sbjct: 243 SLHDLMCQCWRKDPEERPT 261
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 20/223 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
R + +LG GQ+G + K A K++ +D T++ E +K E +M +
Sbjct: 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLK-EAAVMKEIK 67
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVLY 157
HPN+V L V E +++ E G L L + R +L+M Q+ + Y
Sbjct: 68 -HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 126
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ +HRDL N L+ + +K+ADFGL+ + G + G+ F + APE
Sbjct: 127 LEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPE 182
Query: 215 VLAGGYNQ---AADVWSAGVILY-ILLSGMPPFWGNTKSRIFD 253
LA YN+ +DVW+ GV+L+ I GM P+ G S++++
Sbjct: 183 SLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 223
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 94/205 (45%), Gaps = 21/205 (10%)
Query: 47 QQLGWGQFGVIRVCS----DKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHP 102
+QLG G FG + +C TGEV A K + T + R + EIEI+ L H
Sbjct: 19 RQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQ-HD 74
Query: 103 NVVDLKAV--YEDEDYVHLVMELCAGGELFHRLEKFG-RFSEAEARVLFMQLMQVVLYCH 159
N+V K V + L+ME G L L+K R + Q+ + + Y
Sbjct: 75 NIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLG 134
Query: 160 EIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSP-----FYIAPE 214
+HRDL NIL+ + + +K+ DFGL T + P V P F+ APE
Sbjct: 135 TKRYIHRDLATRNILVE---NENRVKIGDFGL-TKVLPQDKEXXKVKEPGESPIFWYAPE 190
Query: 215 VLA-GGYNQAADVWSAGVILYILLS 238
L ++ A+DVWS GV+LY L +
Sbjct: 191 SLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 107/223 (47%), Gaps = 20/223 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
R + +LG GQ+G + K A K++ +D T++ E +K E +M +
Sbjct: 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLK-EAAVMKEIK 67
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVLY 157
HPN+V L V E +++ E G L L + R +L+M Q+ + Y
Sbjct: 68 -HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 126
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ +HRDL N L+ + +K+ADFGL+ + G + G+ F + APE
Sbjct: 127 LEKKNFIHRDLAARNCLV---GENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPE 182
Query: 215 VLAGGYNQ---AADVWSAGVILY-ILLSGMPPFWGNTKSRIFD 253
LA YN+ +DVW+ GV+L+ I GM P+ G S++++
Sbjct: 183 SLA--YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 223
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 121/259 (46%), Gaps = 21/259 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
RE L +LG G FG + + + T V A K++ T+ E ++ E ++M +L
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPG---TMSPEAFLQ-EAQVMKKLR 71
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-KFGRFSEAEARV-LFMQLMQVVLY 157
H +V L AV +E +++V+E + G L L+ + G++ V + Q+ + Y
Sbjct: 72 -HEKLVQLYAVVSEEP-IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ VHRDL+ NIL+ K+ADFGLA IE + G+ F + APE
Sbjct: 130 VERMNYVHRDLRAANILVGENLVC---KVADFGLARLIEDNEX-TARQGAKFPIKWTAPE 185
Query: 215 -VLAGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
L G + +DVWS G++L L + G P+ G + D V R P P +
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPP--ECPE 242
Query: 273 SAKDLVMGMLSTDPSQRLT 291
S DL+ DP +R T
Sbjct: 243 SLHDLMCQCWRKDPEERPT 261
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 18/228 (7%)
Query: 42 RFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH 101
+ +GQ++G G FG V K+ G+V A K + T ++ K E+ ++ R + H
Sbjct: 13 QITVGQRIGSGSFGT--VYKGKWHGDV-AVKMLNVT-APTPQQLQAFKNEVGVL-RKTRH 67
Query: 102 PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARVLFMQLMQVVLYCHE 160
N++ L Y + + +V + C G L+H L +F + + Q + + Y H
Sbjct: 68 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 126
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEP---GQSLLGTVGSPFYIAPEVL- 216
++HRDLK NI L + +K+ DFGLAT GS ++APEV+
Sbjct: 127 KSIIHRDLKSNNIFL---HEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 183
Query: 217 ---AGGYNQAADVWSAGVILYILLSGMPPFWG-NTKSRIFDAVRTADL 260
+ Y+ +DV++ G++LY L++G P+ N + +I + V L
Sbjct: 184 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 231
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 121/259 (46%), Gaps = 21/259 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
RE L +LG G FG + + + T V A K++ T+ E ++ E ++M +L
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPG---TMSPEAFLQ-EAQVMKKLR 71
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-KFGRFSEAEARV-LFMQLMQVVLY 157
H +V L AV +E +++V+E + G L L+ + G++ V + Q+ + Y
Sbjct: 72 -HEKLVQLYAVVSEEP-IYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ VHRDL+ NIL+ K+ADFGLA IE + G+ F + APE
Sbjct: 130 VERMNYVHRDLRAANILVGENLVC---KVADFGLARLIEDNE-YTARQGAKFPIKWTAPE 185
Query: 215 -VLAGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
L G + +DVWS G++L L + G P+ G + D V R P P +
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPP--ECPE 242
Query: 273 SAKDLVMGMLSTDPSQRLT 291
S DL+ DP +R T
Sbjct: 243 SLHDLMCQCWRKDPEERPT 261
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 110/228 (48%), Gaps = 18/228 (7%)
Query: 42 RFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH 101
+ +GQ++G G FG V K+ G+V A K + T ++ K E+ ++ R + H
Sbjct: 25 QITVGQRIGSGSFGT--VYKGKWHGDV-AVKMLNVT-APTPQQLQAFKNEVGVL-RKTRH 79
Query: 102 PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARVLFMQLMQVVLYCHE 160
N++ L Y + + +V + C G L+H L +F + + Q + + Y H
Sbjct: 80 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLAT---YIEPGQSLLGTVGSPFYIAPEVL- 216
++HRDLK NI L + +K+ DFGLAT GS ++APEV+
Sbjct: 139 KSIIHRDLKSNNIFL---HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
Query: 217 ---AGGYNQAADVWSAGVILYILLSGMPPFWG-NTKSRIFDAVRTADL 260
+ Y+ +DV++ G++LY L++G P+ N + +I + V L
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 243
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 106/245 (43%), Gaps = 43/245 (17%)
Query: 95 MTRLSGHPNVVDLKAVYEDEDYV--HLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLM 152
+ L G PN+V L + D+ L+ E + F L + ++ + R +L+
Sbjct: 81 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTD-FKVL--YPTLTDYDIRYYIYELL 137
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIA 212
+ + YCH G++HRD+KP N+++ + ++L D+GLA + PG+ V S ++
Sbjct: 138 KALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKG 195
Query: 213 PEVLAG--GYNQAADVWSAGVILY-ILLSGMPPFWGNTKS----RIFDAVRTADL----- 260
PE+L Y+ + D+WS G + ++ P F+G+ +I + T L
Sbjct: 196 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYLN 255
Query: 261 ---------------RFPSNPW--------DH-ISDSAKDLVMGMLSTDPSQRLTARQVL 296
R PW H +S A D + +L D +RLTA + +
Sbjct: 256 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 315
Query: 297 DHSWM 301
H +
Sbjct: 316 THPYF 320
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 130/335 (38%), Gaps = 72/335 (21%)
Query: 39 LRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRL 98
L+ER+ + LG G FG + C D G I K+ + + +LEI ++ ++
Sbjct: 31 LQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKN---VEKYKEAARLEINVLEKI 87
Query: 99 S-GHPNVVDLKAVYEDEDYVHLVMELCAGGEL-------FHRLEKFGRFSEAEARVLFMQ 150
+ P+ +L + D+ +C EL F + + + + R + Q
Sbjct: 88 NEKDPDNKNL--CVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQ 145
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLAT----------------KASSSPIKLADFGLATY 194
L Q V + H+ + H DLKPENIL S+ +++ DFG AT+
Sbjct: 146 LCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATF 205
Query: 195 IEPGQSLLGTVGSPFYIAPEV-LAGGYNQAADVWSAGVILYILLSGMPPF---------- 243
S + V + Y APEV L G++Q DVWS G I++ G F
Sbjct: 206 DHEHHSTI--VSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHLA 263
Query: 244 -----WGNTKSRIFDAVRTADLRFPSN-PWD-------HISDSAK--------------- 275
G SR+ R + WD ++ ++ K
Sbjct: 264 MMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEEHHQ 323
Query: 276 --DLVMGMLSTDPSQRLTARQVLDHSWMGDGIQDP 308
DL+ ML +P++RLT + L H + +P
Sbjct: 324 LFDLIESMLEYEPAKRLTLGEALQHPFFARLRAEP 358
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 106/230 (46%), Gaps = 21/230 (9%)
Query: 47 QQLGWGQFGVIRVCSD--KFTG--EVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHP 102
Q +G G+FG VCS K G E+F K T R E IM + HP
Sbjct: 39 QVIGAGEFG--EVCSGHLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASIMGQFD-HP 94
Query: 103 NVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARVLFMQLMQVVLYCHEI 161
NV+ L+ V V ++ E G L L + G+F+ + + + + Y ++
Sbjct: 95 NVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADM 154
Query: 162 GVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQS------LLGTVGSPFYIAPEV 215
VHRDL NIL+ S+ K++DFGL+ ++E S LG + APE
Sbjct: 155 NYVHRDLAARNILVN---SNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 211
Query: 216 LA-GGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFP 263
+ + A+DVWS G++++ ++S G P+W T + +A+ D R P
Sbjct: 212 IQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE-QDYRLP 260
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 107/248 (43%), Gaps = 49/248 (19%)
Query: 95 MTRLSGHPNVVDLKAVYEDEDYVH-----LVMELCAGGELFHRLEKFGRFSEAEARVLFM 149
+ L G PN+V L + D+ H L+ E + F L + ++ + R
Sbjct: 80 LQNLXGGPNIVKLLDIVRDQ---HSKTPSLIFEYVNNTD-FKVL--YPTLTDYDIRYYIY 133
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF 209
+L++ + YCH G++HRD+KP N+++ + ++L D+GLA + PG+ V S +
Sbjct: 134 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRY 191
Query: 210 YIAPEVLAG--GYNQAADVWSAGVILY-ILLSGMPPFWGNTKS----RIFDAVRTADL-- 260
+ PE+L Y+ + D+WS G + ++ P F+G+ +I + T L
Sbjct: 192 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 251
Query: 261 ------------------RFPSNPW--------DH-ISDSAKDLVMGMLSTDPSQRLTAR 293
R PW H +S A D + +L D +RLTA
Sbjct: 252 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 311
Query: 294 QVLDHSWM 301
+ + H +
Sbjct: 312 EAMTHPYF 319
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 107/248 (43%), Gaps = 49/248 (19%)
Query: 95 MTRLSGHPNVVDLKAVYEDEDYVH-----LVMELCAGGELFHRLEKFGRFSEAEARVLFM 149
+ L G PN+V L + D+ H L+ E + F L + ++ + R
Sbjct: 79 LQNLXGGPNIVKLLDIVRDQ---HSKTPSLIFEYVNNTD-FKVL--YPTLTDYDIRYYIY 132
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF 209
+L++ + YCH G++HRD+KP N+++ + ++L D+GLA + PG+ V S +
Sbjct: 133 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRY 190
Query: 210 YIAPEVLAG--GYNQAADVWSAGVILY-ILLSGMPPFWGNTKS----RIFDAVRTADL-- 260
+ PE+L Y+ + D+WS G + ++ P F+G+ +I + T L
Sbjct: 191 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 250
Query: 261 ------------------RFPSNPW--------DH-ISDSAKDLVMGMLSTDPSQRLTAR 293
R PW H +S A D + +L D +RLTA
Sbjct: 251 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 310
Query: 294 QVLDHSWM 301
+ + H +
Sbjct: 311 EAMTHPYF 318
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 130/307 (42%), Gaps = 53/307 (17%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G G++ D A K +++ +R+ + E+ +M +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVN 81
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H N++ L V+ E+ V++VMEL L ++ L Q++
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLCQVIQM--ELDHERMSYLLYQMLCG 138
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ + H G++HRDLKP NI++ + + +K+ DFGLA + V + +Y APE
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLARTAGTSFMMEPEVVTRYYRAPE 195
Query: 215 VLAG-GYNQAADVWSAGVIL------YILLSGM-----------------PPFWGNTKSR 250
V+ G GY + D+WS G I+ IL G P F +
Sbjct: 196 VILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFMKKLQPT 255
Query: 251 IFDAVRT-------------ADLRFPSNPWDH--ISDSAKDLVMGMLSTDPSQRLTARQV 295
+ + V D+ FP++ + + A+DL+ ML D S+R++ +
Sbjct: 256 VRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 315
Query: 296 LDHSWMG 302
L H ++
Sbjct: 316 LQHPYIN 322
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 107/248 (43%), Gaps = 49/248 (19%)
Query: 95 MTRLSGHPNVVDLKAVYEDEDYVH-----LVMELCAGGELFHRLEKFGRFSEAEARVLFM 149
+ L G PN+V L + D+ H L+ E + F L + ++ + R
Sbjct: 79 LQNLXGGPNIVKLLDIVRDQ---HSKTPSLIFEYVNNTD-FKVL--YPTLTDYDIRYYIY 132
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF 209
+L++ + YCH G++HRD+KP N+++ + ++L D+GLA + PG+ V S +
Sbjct: 133 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRY 190
Query: 210 YIAPEVLAG--GYNQAADVWSAGVILY-ILLSGMPPFWGNTKS----RIFDAVRTADL-- 260
+ PE+L Y+ + D+WS G + ++ P F+G+ +I + T L
Sbjct: 191 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 250
Query: 261 ------------------RFPSNPW--------DH-ISDSAKDLVMGMLSTDPSQRLTAR 293
R PW H +S A D + +L D +RLTA
Sbjct: 251 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 310
Query: 294 QVLDHSWM 301
+ + H +
Sbjct: 311 EAMTHPYF 318
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 107/248 (43%), Gaps = 49/248 (19%)
Query: 95 MTRLSGHPNVVDLKAVYEDEDYVH-----LVMELCAGGELFHRLEKFGRFSEAEARVLFM 149
+ L G PN+V L + D+ H L+ E + F L + ++ + R
Sbjct: 79 LQNLCGGPNIVKLLDIVRDQ---HSKTPSLIFEYVNNTD-FKVL--YPTLTDYDIRYYIY 132
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF 209
+L++ + YCH G++HRD+KP N+++ + ++L D+GLA + PG+ V S +
Sbjct: 133 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRY 190
Query: 210 YIAPEVLAG--GYNQAADVWSAGVILY-ILLSGMPPFWGNTKS----RIFDAVRTADL-- 260
+ PE+L Y+ + D+WS G + ++ P F+G+ +I + T L
Sbjct: 191 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 250
Query: 261 ------------------RFPSNPW--------DH-ISDSAKDLVMGMLSTDPSQRLTAR 293
R PW H +S A D + +L D +RLTA
Sbjct: 251 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 310
Query: 294 QVLDHSWM 301
+ + H +
Sbjct: 311 EAMTHPYF 318
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 107/248 (43%), Gaps = 49/248 (19%)
Query: 95 MTRLSGHPNVVDLKAVYEDEDYVH-----LVMELCAGGELFHRLEKFGRFSEAEARVLFM 149
+ L G PN+V L + D+ H L+ E + F L + ++ + R
Sbjct: 80 LQNLCGGPNIVKLLDIVRDQ---HSKTPSLIFEYVNNTD-FKVL--YPTLTDYDIRYYIY 133
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF 209
+L++ + YCH G++HRD+KP N+++ + ++L D+GLA + PG+ V S +
Sbjct: 134 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRY 191
Query: 210 YIAPEVLAG--GYNQAADVWSAGVILY-ILLSGMPPFWGNTKS----RIFDAVRTADL-- 260
+ PE+L Y+ + D+WS G + ++ P F+G+ +I + T L
Sbjct: 192 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 251
Query: 261 ------------------RFPSNPW--------DH-ISDSAKDLVMGMLSTDPSQRLTAR 293
R PW H +S A D + +L D +RLTA
Sbjct: 252 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 311
Query: 294 QVLDHSWM 301
+ + H +
Sbjct: 312 EAMTHPYF 319
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 107/248 (43%), Gaps = 49/248 (19%)
Query: 95 MTRLSGHPNVVDLKAVYEDEDYVH-----LVMELCAGGELFHRLEKFGRFSEAEARVLFM 149
+ L G PN+V L + D+ H L+ E + F L + ++ + R
Sbjct: 79 LQNLXGGPNIVKLLDIVRDQ---HSKTPSLIFEYVNNTD-FKVL--YPTLTDYDIRYYIY 132
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF 209
+L++ + YCH G++HRD+KP N+++ + ++L D+GLA + PG+ V S +
Sbjct: 133 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRY 190
Query: 210 YIAPEVLAG--GYNQAADVWSAGVILY-ILLSGMPPFWGNTKS----RIFDAVRTADL-- 260
+ PE+L Y+ + D+WS G + ++ P F+G+ +I + T L
Sbjct: 191 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 250
Query: 261 ------------------RFPSNPW--------DH-ISDSAKDLVMGMLSTDPSQRLTAR 293
R PW H +S A D + +L D +RLTA
Sbjct: 251 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 310
Query: 294 QVLDHSWM 301
+ + H +
Sbjct: 311 EAMTHPYF 318
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 106/245 (43%), Gaps = 43/245 (17%)
Query: 95 MTRLSGHPNVVDLKAVYEDEDYV--HLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLM 152
+ L G PN+V L + D+ L+ E + F L + ++ + R +L+
Sbjct: 100 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTD-FKVL--YPTLTDYDIRYYIYELL 156
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIA 212
+ + YCH G++HRD+KP N+++ + ++L D+GLA + PG+ V S ++
Sbjct: 157 KALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRYFKG 214
Query: 213 PEVLAG--GYNQAADVWSAGVILY-ILLSGMPPFWGNTKS----RIFDAVRTADL----- 260
PE+L Y+ + D+WS G + ++ P F+G+ +I + T L
Sbjct: 215 PELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYLN 274
Query: 261 ---------------RFPSNPW--------DH-ISDSAKDLVMGMLSTDPSQRLTARQVL 296
R PW H +S A D + +L D +RLTA + +
Sbjct: 275 KYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTALEAM 334
Query: 297 DHSWM 301
H +
Sbjct: 335 THPYF 339
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 137/296 (46%), Gaps = 44/296 (14%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKF------TGEVFACKSIAKDRLVTIDDERSVKLEIE 93
R+R LG+ LG G FG + + +D F T A K + + T + R++ E++
Sbjct: 26 RDRLNLGKPLGRGAFGQV-IEADAFGIDKTATXRTVAVKMLKEG--ATHSEHRALMSELK 82
Query: 94 IMTRLSGHPNVVDL-KAVYEDEDYVHLVMELCAGGEL--FHRLEKFGRFSEAEARVLFMQ 150
I+ + H NVV+L A + + +++E C G L + R ++ + F+
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLT 142
Query: 151 LMQVVLYCHEIG----------VVHRDLKPENILLATKASSSPIKLADFGLA--TYIEPG 198
L ++ Y ++ +HRDL NILL+ K + +K+ DFGLA Y +P
Sbjct: 143 LEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEK---NVVKIXDFGLARDIYKDPD 199
Query: 199 QSLLGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWG-----NTKSR 250
G P ++APE + Y +DVWS GV+L+ + S G P+ G R
Sbjct: 200 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRR 259
Query: 251 IFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQ 306
+ + R +R P D+ + ++ +PSQR T ++++H +G+ +Q
Sbjct: 260 LKEGTR---MRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH--LGNLLQ 306
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 99/220 (45%), Gaps = 23/220 (10%)
Query: 32 DTNQISNLRERFVLGQQLGWGQFGVIRVCS----DKFTGEVFACKSIAKDRLVTIDDERS 87
D Q +F+ QQLG G FG + +C TGEV A K + T + R
Sbjct: 4 DPTQFEERHLKFL--QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRD 58
Query: 88 VKLEIEIMTRLSGHPNVVDLKAV--YEDEDYVHLVMELCAGGELFHRLEKFG-RFSEAEA 144
+ EIEI+ L H N+V K V + L+ME G L L+K R +
Sbjct: 59 FEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL 117
Query: 145 RVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT 204
Q+ + + Y +HR+L NIL+ + + +K+ DFGL T + P
Sbjct: 118 LQYTSQICKGMEYLGTKRYIHRNLATRNILVE---NENRVKIGDFGL-TKVLPQDKEYYK 173
Query: 205 VGSP-----FYIAPEVLA-GGYNQAADVWSAGVILYILLS 238
V P F+ APE L ++ A+DVWS GV+LY L +
Sbjct: 174 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 107/248 (43%), Gaps = 49/248 (19%)
Query: 95 MTRLSGHPNVVDLKAVYEDEDYVH-----LVMELCAGGELFHRLEKFGRFSEAEARVLFM 149
+ L G PN+V L + D+ H L+ E + F L + ++ + R
Sbjct: 79 LQNLCGGPNIVKLLDIVRDQ---HSKTPSLIFEYVNNTD-FKVL--YPTLTDYDIRYYIY 132
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF 209
+L++ + YCH G++HRD+KP N+++ + ++L D+GLA + PG+ V S +
Sbjct: 133 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRY 190
Query: 210 YIAPEVLAG--GYNQAADVWSAGVILY-ILLSGMPPFWGNTKS----RIFDAVRTADL-- 260
+ PE+L Y+ + D+WS G + ++ P F+G+ +I + T L
Sbjct: 191 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 250
Query: 261 ------------------RFPSNPW--------DH-ISDSAKDLVMGMLSTDPSQRLTAR 293
R PW H +S A D + +L D +RLTA
Sbjct: 251 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 310
Query: 294 QVLDHSWM 301
+ + H +
Sbjct: 311 EAMTHPYF 318
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 107/248 (43%), Gaps = 49/248 (19%)
Query: 95 MTRLSGHPNVVDLKAVYEDEDYVH-----LVMELCAGGELFHRLEKFGRFSEAEARVLFM 149
+ L G PN+V L + D+ H L+ E + F L + ++ + R
Sbjct: 79 LQNLMGGPNIVKLLDIVRDQ---HSKTPSLIFEYVNNTD-FKVL--YPTLTDYDIRYYIY 132
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF 209
+L++ + YCH G++HRD+KP N+++ + ++L D+GLA + PG+ V S +
Sbjct: 133 ELLKALDYCHSQGIMHRDVKPHNVMIDHELRK--LRLIDWGLAEFYHPGKEYNVRVASRY 190
Query: 210 YIAPEVLAG--GYNQAADVWSAGVILY-ILLSGMPPFWGNTKS----RIFDAVRTADL-- 260
+ PE+L Y+ + D+WS G + ++ P F+G+ +I + T L
Sbjct: 191 FKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNV 250
Query: 261 ------------------RFPSNPW--------DH-ISDSAKDLVMGMLSTDPSQRLTAR 293
R PW H +S A D + +L D +RLTA
Sbjct: 251 YLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERLTAL 310
Query: 294 QVLDHSWM 301
+ + H +
Sbjct: 311 EAMTHPYF 318
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 96/198 (48%), Gaps = 33/198 (16%)
Query: 91 EIEIMTRLSGHPNVVDLKAVY--EDEDYVHLVMELCAGGELFHRLEKFGRFSEAE----- 143
EI ++ L HPNV+ L+ V+ + V L+ + A +L+H + KF R S+A
Sbjct: 68 EIALLRELK-HPNVISLQKVFLSHADRKVWLLFDY-AEHDLWHII-KFHRASKANKKPVQ 124
Query: 144 -----ARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKA-SSSPIKLADFGLATY--- 194
+ L Q++ + Y H V+HRDLKP NIL+ + +K+AD G A
Sbjct: 125 LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNS 184
Query: 195 -IEPGQSLLGTVGSPFYIAPEVLAGG--YNQAADVWSAGVILYILLSGMPPFWGNTKSRI 251
++P L V + +Y APE+L G Y +A D+W+ G I LL+ P F
Sbjct: 185 PLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF-------- 236
Query: 252 FDAVRTADLRFPSNPWDH 269
R D++ SNP+ H
Sbjct: 237 --HCRQEDIK-TSNPYHH 251
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 120/259 (46%), Gaps = 21/259 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
RE L +LG G FG + + + T V A K++ T+ E ++ E ++M +L
Sbjct: 6 RESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPG---TMSPEAFLQ-EAQVMKKLR 60
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-KFGRFSEAEARV-LFMQLMQVVLY 157
H +V L AV +E +++V E + G L L+ + G++ V + Q+ + Y
Sbjct: 61 -HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 118
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ VHRDL+ NIL+ K+ADFGLA IE + G+ F + APE
Sbjct: 119 VERMNYVHRDLRAANILVGENLVC---KVADFGLARLIEDNE-YTARQGAKFPIKWTAPE 174
Query: 215 -VLAGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
L G + +DVWS G++L L + G P+ G + D V R P P +
Sbjct: 175 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPP--ECPE 231
Query: 273 SAKDLVMGMLSTDPSQRLT 291
S DL+ DP +R T
Sbjct: 232 SLHDLMCQCWRKDPEERPT 250
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 116/267 (43%), Gaps = 38/267 (14%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
+G G FG + + G+ + K V ++E++ + E++ + +L H N+V
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKR------VKYNNEKAER-EVKALAKLD-HVNIVHYN 70
Query: 109 AVYEDEDY----------------VHLVMELCAGGELFHRLEKFG--RFSEAEARVLFMQ 150
++ DY + + ME C G L +EK + + A LF Q
Sbjct: 71 GCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQ 130
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFY 210
+ + V Y H +++RDLKP NI L + +K+ DFGL T ++ + G+ Y
Sbjct: 131 ITKGVDYIHSKKLINRDLKPSNIFL---VDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRY 187
Query: 211 IAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDH 269
++PE ++ Y + D+++ G+IL LL + S+ F +R + D
Sbjct: 188 MSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET--SKFFTDLRDGIIS------DI 239
Query: 270 ISDSAKDLVMGMLSTDPSQRLTARQVL 296
K L+ +LS P R ++L
Sbjct: 240 FDKKEKTLLQKLLSKKPEDRPNTSEIL 266
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 98/220 (44%), Gaps = 23/220 (10%)
Query: 32 DTNQISNLRERFVLGQQLGWGQFGVIRVCS----DKFTGEVFACKSIAKDRLVTIDDERS 87
D Q +F+ QQLG G FG + +C TGEV A K + T + R
Sbjct: 6 DPTQFEERHLKFL--QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRD 60
Query: 88 VKLEIEIMTRLSGHPNVVDLKAV--YEDEDYVHLVMELCAGGELFHRLEKFG-RFSEAEA 144
+ EIEI+ L H N+V K V + L+ME G L L+ R +
Sbjct: 61 FEREIEILKSLQ-HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKL 119
Query: 145 RVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT 204
Q+ + + Y +HRDL NIL+ + + +K+ DFGL T + P
Sbjct: 120 LQYTSQICKGMEYLGTKRYIHRDLATRNILVE---NENRVKIGDFGL-TKVLPQDKEXXK 175
Query: 205 VGSP-----FYIAPEVLA-GGYNQAADVWSAGVILYILLS 238
V P F+ APE L ++ A+DVWS GV+LY L +
Sbjct: 176 VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 108/226 (47%), Gaps = 17/226 (7%)
Query: 49 LGWGQFGVIRVCSD--KFTGEVFACKSIAKDRL-VTIDDERSVKLEIEIMTRLSGHPNVV 105
+G G+FG VCS K G+ +I ++ T R E IM + HPNVV
Sbjct: 51 IGAGEFG--EVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFD-HPNVV 107
Query: 106 DLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARVLFMQLMQVVLYCHEIGVV 164
L+ V V +V+E G L L K G+F+ + + + + Y ++G V
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYV 167
Query: 165 HRDLKPENILLATKASSSPIKLADFGLATYIEPG-QSLLGTVGSPF---YIAPEVLA-GG 219
HRDL NIL+ S+ K++DFGL+ IE +++ T G + APE +
Sbjct: 168 HRDLAARNILV---NSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRK 224
Query: 220 YNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFPS 264
+ A+DVWS G++++ ++S G P+W + + A+ R P+
Sbjct: 225 FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG-YRLPA 269
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 137/298 (45%), Gaps = 46/298 (15%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKF------TGEVFACKSIAKDRLVTIDDERSVKLEIE 93
R+R LG+ LG G FG + + +D F T A K + + T + R++ E++
Sbjct: 28 RDRLKLGKPLGRGAFGQV-IEADAFGIDKTATXRTVAVKMLKEG--ATHSEHRALMSELK 84
Query: 94 IMTRLSGHPNVVDL-KAVYEDEDYVHLVMELCAGGELFHRLE----KFGRFSEAEARVLF 148
I+ + H NVV+L A + + +++E C G L L +F + + F
Sbjct: 85 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDF 144
Query: 149 MQLMQVVLYCHEIG----------VVHRDLKPENILLATKASSSPIKLADFGLATYI--E 196
+ L ++ Y ++ +HRDL NILL+ K + +K+ DFGLA I +
Sbjct: 145 LTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEK---NVVKICDFGLARDIXKD 201
Query: 197 PGQSLLGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWG-----NTK 248
P G P ++APE + Y +DVWS GV+L+ + S G P+ G
Sbjct: 202 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFC 261
Query: 249 SRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQ 306
R+ + R +R P D+ + ++ +PSQR T ++++H +G+ +Q
Sbjct: 262 RRLKEGTR---MRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH--LGNLLQ 310
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 120/259 (46%), Gaps = 21/259 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
RE L +LG G FG + + + T V A K++ T+ E ++ E ++M +L
Sbjct: 8 RESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPG---TMSPEAFLQ-EAQVMKKLR 62
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-KFGRFSEAEARV-LFMQLMQVVLY 157
H +V L AV +E +++V E + G L L+ + G++ V + Q+ + Y
Sbjct: 63 -HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 120
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ VHRDL+ NIL+ K+ADFGLA IE + G+ F + APE
Sbjct: 121 VERMNYVHRDLRAANILVGENLVC---KVADFGLARLIEDNE-YTARQGAKFPIKWTAPE 176
Query: 215 -VLAGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
L G + +DVWS G++L L + G P+ G + D V R P P +
Sbjct: 177 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPP--ECPE 233
Query: 273 SAKDLVMGMLSTDPSQRLT 291
S DL+ DP +R T
Sbjct: 234 SLHDLMCQCWRKDPEERPT 252
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 120/259 (46%), Gaps = 21/259 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
RE L +LG G FG + + + T V A K++ T+ E ++ E ++M +L
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPG---TMSPEAFLQ-EAQVMKKLR 71
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-KFGRFSEAEARV-LFMQLMQVVLY 157
H +V L AV +E +++V E + G L L+ + G++ V + Q+ + Y
Sbjct: 72 -HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ VHRDL+ NIL+ K+ADFGLA IE + G+ F + APE
Sbjct: 130 VERMNYVHRDLRAANILVGENLVC---KVADFGLARLIEDNE-YTARQGAKFPIKWTAPE 185
Query: 215 -VLAGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
L G + +DVWS G++L L + G P+ G + D V R P P +
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPP--ECPE 242
Query: 273 SAKDLVMGMLSTDPSQRLT 291
S DL+ DP +R T
Sbjct: 243 SLHDLMCQCWRKDPEERPT 261
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 120/259 (46%), Gaps = 21/259 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
RE L +LG G FG + + + T V A K++ T+ E ++ E ++M +L
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPG---TMSPEAFLQ-EAQVMKKLR 71
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-KFGRFSEAEARV-LFMQLMQVVLY 157
H +V L AV +E +++V E + G L L+ + G++ V + Q+ + Y
Sbjct: 72 -HEKLVQLYAVVSEEP-IYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ VHRDL+ NIL+ K+ADFGLA IE + G+ F + APE
Sbjct: 130 VERMNYVHRDLRAANILVGENLVC---KVADFGLARLIEDNE-YTARQGAKFPIKWTAPE 185
Query: 215 -VLAGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
L G + +DVWS G++L L + G P+ G + D V R P P +
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPP--ECPE 242
Query: 273 SAKDLVMGMLSTDPSQRLT 291
S DL+ DP +R T
Sbjct: 243 SLHDLMCQCWRKDPEERPT 261
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 134/314 (42%), Gaps = 67/314 (21%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G G++ D A K +++ +R+ + E+ +M +
Sbjct: 29 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVN 86
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H N++ L V+ E+ V++VMEL L ++ L Q++
Sbjct: 87 HKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLCQVIQM--ELDHERMSYLLYQMLCG 143
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT--VGSPFYIA 212
+ + H G++HRDLKP NI++ + + +K+ DFGLA G S + T V + +Y A
Sbjct: 144 IKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLAR--TAGTSFMMTPYVVTRYYRA 198
Query: 213 PEVLAG-GYNQAADVWSAGVIL------YILLSG-------------------------- 239
PEV+ G GY + D+WS G I+ IL G
Sbjct: 199 PEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 258
Query: 240 ---------MPPFWGNTKSRIFDAVRTADLRFPSNPWDH--ISDSAKDLVMGMLSTDPSQ 288
P + G + ++F D+ FP++ + + A+DL+ ML D S+
Sbjct: 259 PTVRTYVENRPKYAGYSFEKLF-----PDVLFPADSEHNKLKASQARDLLSKMLVIDASK 313
Query: 289 RLTARQVLDHSWMG 302
R++ + L H ++
Sbjct: 314 RISVDEALQHPYIN 327
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 138/359 (38%), Gaps = 98/359 (27%)
Query: 36 ISNLR--ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIE 93
I N++ + + + +G G +G + + DK + A K + + ID +R ++ EI
Sbjct: 21 IKNVKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILR-EIT 79
Query: 94 IMTRLSG------HPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVL 147
I+ RL H ++ + DE Y+ V+E+ A +L + +E + +
Sbjct: 80 ILNRLKSDYIIRLHDLIIPEDLLKFDELYI--VLEI-ADSDLKKLFKTPIFLTEQHVKTI 136
Query: 148 FMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIE----------- 196
L+ + HE G++HRDLKP N LL S +K+ DFGLA I
Sbjct: 137 LYNLLLGEKFIHESGIIHRDLKPANCLLNQDCS---VKICDFGLARTINSDKDIHIVNDL 193
Query: 197 --------PG-------QSLLGTVGSPFYIAPE--VLAGGYNQAADVWSAGVILYILLSG 239
PG + L V + +Y APE +L Y + D+WS G I LL+
Sbjct: 194 EEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNM 253
Query: 240 MPPFWGNTKSR--------------------------------IFDAVRT---ADLR--- 261
M N +R IF+ + T DL+
Sbjct: 254 MKSHINNPTNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCIT 313
Query: 262 ----------FP-------SNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGD 303
FP S + IS DL+ ML + +R+T + L H ++ D
Sbjct: 314 KQEVIKYIKLFPTRDGIDLSKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKD 372
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 42 RFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH 101
+ +GQ++G G FG V K+ G+V A K + T ++ K E+ ++ R + H
Sbjct: 36 QITVGQRIGSGSFGT--VYKGKWHGDV-AVKMLNVT-APTPQQLQAFKNEVGVL-RKTRH 90
Query: 102 PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARVLFMQLMQVVLYCHE 160
N++ L Y + + +V + C G L+H L +F + + Q Q + Y H
Sbjct: 91 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 149
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEP---GQSLLGTVGSPFYIAPEVL- 216
++HRDLK NI L + +K+ DFGLAT GS ++APEV+
Sbjct: 150 KSIIHRDLKSNNIFLHEDLT---VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 206
Query: 217 ---AGGYNQAADVWSAGVILYILLSGMPPF 243
Y+ +DV++ G++LY L++G P+
Sbjct: 207 MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 236
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 42 RFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH 101
+ +GQ++G G FG V K+ G+V A K + T ++ K E+ ++ R + H
Sbjct: 37 QITVGQRIGSGSFGT--VYKGKWHGDV-AVKMLNVT-APTPQQLQAFKNEVGVL-RKTRH 91
Query: 102 PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARVLFMQLMQVVLYCHE 160
N++ L Y + + +V + C G L+H L +F + + Q Q + Y H
Sbjct: 92 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 150
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEP---GQSLLGTVGSPFYIAPEVL- 216
++HRDLK NI L + +K+ DFGLAT GS ++APEV+
Sbjct: 151 KSIIHRDLKSNNIFLHEDLT---VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 207
Query: 217 ---AGGYNQAADVWSAGVILYILLSGMPPF 243
Y+ +DV++ G++LY L++G P+
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 109/228 (47%), Gaps = 18/228 (7%)
Query: 42 RFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH 101
+ +GQ++G G FG V K+ G+V A K + T ++ K E+ ++ R + H
Sbjct: 25 QITVGQRIGSGSFGT--VYKGKWHGDV-AVKMLNVT-APTPQQLQAFKNEVGVL-RKTRH 79
Query: 102 PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARVLFMQLMQVVLYCHE 160
N++ L Y + +V + C G L+H L +F + + Q + + Y H
Sbjct: 80 VNIL-LFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHA 138
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLAT---YIEPGQSLLGTVGSPFYIAPEVL- 216
++HRDLK NI L + +K+ DFGLAT GS ++APEV+
Sbjct: 139 KSIIHRDLKSNNIFL---HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 195
Query: 217 ---AGGYNQAADVWSAGVILYILLSGMPPFWG-NTKSRIFDAVRTADL 260
+ Y+ +DV++ G++LY L++G P+ N + +I + V L
Sbjct: 196 MQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 243
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 33/210 (15%)
Query: 48 QLGWGQFGVIRVCS-DKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
QLG G FG + +C D A ++ + + D +R + EI+I+ L D
Sbjct: 17 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS-----D 71
Query: 107 LKAVYEDEDY------VHLVMELCAGGELFHRLEKFGRFSEAEARVLFM-QLMQVVLYCH 159
Y Y + LVME G L L++ +A +L+ Q+ + + Y
Sbjct: 72 FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG 131
Query: 160 EIGVVHRDLKPENILLATKASSSPIKLADFGLATYI----------EPGQSLLGTVGSPF 209
VHRDL NIL+ ++A +K+ADFGLA + EPGQS + F
Sbjct: 132 SRRCVHRDLAARNILVESEAH---VKIADFGLAKLLPLDKDYYVVREPGQSPI------F 182
Query: 210 YIAPEVLAGG-YNQAADVWSAGVILYILLS 238
+ APE L+ +++ +DVWS GV+LY L +
Sbjct: 183 WYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 137/296 (46%), Gaps = 44/296 (14%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKF------TGEVFACKSIAKDRLVTIDDERSVKLEIE 93
R+R LG+ LG G FG + + +D F T A K + + T + R++ E++
Sbjct: 26 RDRLNLGKPLGRGAFGQV-IEADAFGIDKTATXRTVAVKMLKEG--ATHSEHRALMSELK 82
Query: 94 IMTRLSGHPNVVDL-KAVYEDEDYVHLVMELCAGGEL--FHRLEKFGRFSEAEARVLFMQ 150
I+ + H NVV+L A + + +++E C G L + R ++ + F+
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLT 142
Query: 151 LMQVVLYCHEIG----------VVHRDLKPENILLATKASSSPIKLADFGLA--TYIEPG 198
L ++ Y ++ +HRDL NILL+ K + +K+ DFGLA Y +P
Sbjct: 143 LEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEK---NVVKICDFGLARDIYKDPD 199
Query: 199 QSLLGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWG-----NTKSR 250
G P ++APE + Y +DVWS GV+L+ + S G P+ G R
Sbjct: 200 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR 259
Query: 251 IFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQ 306
+ + R +R P D+ + ++ +PSQR T ++++H +G+ +Q
Sbjct: 260 LKEGTR---MRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH--LGNLLQ 306
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 42 RFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH 101
+ +GQ++G G FG V K+ G+V A K + T ++ K E+ ++ R + H
Sbjct: 37 QITVGQRIGSGSFGT--VYKGKWHGDV-AVKMLNVT-APTPQQLQAFKNEVGVL-RKTRH 91
Query: 102 PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARVLFMQLMQVVLYCHE 160
N++ L Y + + +V + C G L+H L +F + + Q Q + Y H
Sbjct: 92 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 150
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLAT---YIEPGQSLLGTVGSPFYIAPEVL- 216
++HRDLK NI L + +K+ DFGLAT GS ++APEV+
Sbjct: 151 KSIIHRDLKSNNIFLHEDLT---VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 207
Query: 217 ---AGGYNQAADVWSAGVILYILLSGMPPF 243
Y+ +DV++ G++LY L++G P+
Sbjct: 208 MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 134/314 (42%), Gaps = 67/314 (21%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G G++ D A K +++ +R+ + E+ +M +
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVN 75
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H N++ L V+ E+ V++VMEL L ++ L Q++
Sbjct: 76 HKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLCQVIQM--ELDHERMSYLLYQMLCG 132
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT--VGSPFYIA 212
+ + H G++HRDLKP NI++ + + +K+ DFGLA G S + T V + +Y A
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLAR--TAGTSFMMTPYVVTRYYRA 187
Query: 213 PEVLAG-GYNQAADVWSAGVIL------YILLSG-------------------------- 239
PEV+ G GY + D+WS G I+ IL G
Sbjct: 188 PEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQ 247
Query: 240 ---------MPPFWGNTKSRIFDAVRTADLRFPSNPWDH--ISDSAKDLVMGMLSTDPSQ 288
P + G + ++F D+ FP++ + + A+DL+ ML D S+
Sbjct: 248 PTVRTYVENRPKYAGYSFEKLF-----PDVLFPADSEHNKLKASQARDLLSKMLVIDASK 302
Query: 289 RLTARQVLDHSWMG 302
R++ + L H ++
Sbjct: 303 RISVDEALQHPYIN 316
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 33/210 (15%)
Query: 48 QLGWGQFGVIRVCS-DKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
QLG G FG + +C D A ++ + + D +R + EI+I+ L D
Sbjct: 18 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS-----D 72
Query: 107 LKAVYEDEDY------VHLVMELCAGGELFHRLEKFGRFSEAEARVLFM-QLMQVVLYCH 159
Y Y + LVME G L L++ +A +L+ Q+ + + Y
Sbjct: 73 FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG 132
Query: 160 EIGVVHRDLKPENILLATKASSSPIKLADFGLATYI----------EPGQSLLGTVGSPF 209
VHRDL NIL+ ++A +K+ADFGLA + EPGQS + F
Sbjct: 133 SRRCVHRDLAARNILVESEAH---VKIADFGLAKLLPLDKDYYVVREPGQSPI------F 183
Query: 210 YIAPEVLAGG-YNQAADVWSAGVILYILLS 238
+ APE L+ +++ +DVWS GV+LY L +
Sbjct: 184 WYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 42 RFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH 101
+ +GQ++G G FG V K+ G+V A K + T ++ K E+ ++ R + H
Sbjct: 14 QITVGQRIGSGSFGT--VYKGKWHGDV-AVKMLNVTA-PTPQQLQAFKNEVGVL-RKTRH 68
Query: 102 PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARVLFMQLMQVVLYCHE 160
N++ L Y + + +V + C G L+H L +F + + Q Q + Y H
Sbjct: 69 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEP---GQSLLGTVGSPFYIAPEVL- 216
++HRDLK NI L + +K+ DFGLAT GS ++APEV+
Sbjct: 128 KSIIHRDLKSNNIFLHEDLT---VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 217 ---AGGYNQAADVWSAGVILYILLSGMPPF 243
Y+ +DV++ G++LY L++G P+
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 42 RFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH 101
+ +GQ++G G FG V K+ G+V A K + T ++ K E+ ++ R + H
Sbjct: 29 QITVGQRIGSGSFGT--VYKGKWHGDV-AVKMLNVT-APTPQQLQAFKNEVGVL-RKTRH 83
Query: 102 PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARVLFMQLMQVVLYCHE 160
N++ L Y + + +V + C G L+H L +F + + Q Q + Y H
Sbjct: 84 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 142
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLAT---YIEPGQSLLGTVGSPFYIAPEVL- 216
++HRDLK NI L + +K+ DFGLAT GS ++APEV+
Sbjct: 143 KSIIHRDLKSNNIFLHEDLT---VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 199
Query: 217 ---AGGYNQAADVWSAGVILYILLSGMPPF 243
Y+ +DV++ G++LY L++G P+
Sbjct: 200 MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 229
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 42 RFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH 101
+ +GQ++G G FG V K+ G+V A K + T ++ K E+ ++ R + H
Sbjct: 11 QITVGQRIGSGSFGT--VYKGKWHGDV-AVKMLNVTA-PTPQQLQAFKNEVGVL-RKTRH 65
Query: 102 PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARVLFMQLMQVVLYCHE 160
N++ L Y + + +V + C G L+H L +F + + Q Q + Y H
Sbjct: 66 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 124
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEP---GQSLLGTVGSPFYIAPEVL- 216
++HRDLK NI L + +K+ DFGLAT GS ++APEV+
Sbjct: 125 KSIIHRDLKSNNIFLHEDLT---VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 181
Query: 217 ---AGGYNQAADVWSAGVILYILLSGMPPF 243
Y+ +DV++ G++LY L++G P+
Sbjct: 182 MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 211
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 89/207 (42%), Gaps = 24/207 (11%)
Query: 101 HPNVVDLKAVYEDED-----YVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVV 155
HP++V + E D ++VME G L + K + AEA ++++ +
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSL--KRSKGQKLPVAEAIAYLLEILPAL 195
Query: 156 LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEV 215
Y H IG+V+ DLKPENI+L + +KL D G + I L GT P + APE+
Sbjct: 196 SYLHSIGLVYNDLKPENIML----TEEQLKLIDLGAVSRINSFGYLYGT---PGFQAPEI 248
Query: 216 LAGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
+ G A D+++ G L L +P R D + D P DS
Sbjct: 249 VRTGPTVATDIYTVGRTLAALTLDLP----TRNGRYVDGLPEDD------PVLKTYDSYG 298
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSWMG 302
L+ + DP QR T + + G
Sbjct: 299 RLLRRAIDPDPRQRFTTAEEMSAQLTG 325
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 42 RFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH 101
+ +GQ++G G FG V K+ G+V A K + T ++ K E+ ++ R + H
Sbjct: 14 QITVGQRIGSGSFGT--VYKGKWHGDV-AVKMLNVTA-PTPQQLQAFKNEVGVL-RKTRH 68
Query: 102 PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARVLFMQLMQVVLYCHE 160
N++ L Y + + +V + C G L+H L +F + + Q Q + Y H
Sbjct: 69 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 127
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEP---GQSLLGTVGSPFYIAPEVL- 216
++HRDLK NI L + +K+ DFGLAT GS ++APEV+
Sbjct: 128 KSIIHRDLKSNNIFLHEDLT---VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 184
Query: 217 ---AGGYNQAADVWSAGVILYILLSGMPPF 243
Y+ +DV++ G++LY L++G P+
Sbjct: 185 MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 33/210 (15%)
Query: 48 QLGWGQFGVIRVCS-DKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
QLG G FG + +C D A ++ + + D +R + EI+I+ L D
Sbjct: 30 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS-----D 84
Query: 107 LKAVYEDEDY------VHLVMELCAGGELFHRLEKFGRFSEAEARVLFM-QLMQVVLYCH 159
Y Y + LVME G L L++ +A +L+ Q+ + + Y
Sbjct: 85 FIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG 144
Query: 160 EIGVVHRDLKPENILLATKASSSPIKLADFGLATYI----------EPGQSLLGTVGSPF 209
VHRDL NIL+ ++A +K+ADFGLA + EPGQS + F
Sbjct: 145 SRRCVHRDLAARNILVESEAH---VKIADFGLAKLLPLDKDYYVVREPGQSPI------F 195
Query: 210 YIAPEVLAGG-YNQAADVWSAGVILYILLS 238
+ APE L+ +++ +DVWS GV+LY L +
Sbjct: 196 WYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 119/329 (36%), Gaps = 72/329 (21%)
Query: 39 LRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDER-SVKLEIEIMTR 97
L+ER+ + LG G FG + C D G+ +A + + R + +LEI ++ +
Sbjct: 49 LQERYEIVGNLGEGTFGKVVECLDHARGK----SQVALKIIRNVGKYREAARLEINVLKK 104
Query: 98 LSGHPNVVDLKAVYEDEDYVHLVMELCAGGEL-------FHRLEKFGRFSEAEARVLFMQ 150
+ V D+ + +C EL F + F + R + Q
Sbjct: 105 IKEKDKENKFLCVLMS-DWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQ 163
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLAT----------------KASSSPIKLADFGLATY 194
L + + HE + H DLKPENIL ++ I++ADFG AT+
Sbjct: 164 LCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF 223
Query: 195 IEPGQSLLGTVGSPFYIAPEV-LAGGYNQAADVWSAGVILYILLSG-------------- 239
+ + V + Y PEV L G+ Q DVWS G IL+ G
Sbjct: 224 DHEHHTTI--VATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLV 281
Query: 240 -MPPFWGNTKSRIFDAVRTADLRFPSN-PWDHISDSAK---------------------- 275
M G S + R + WD S +
Sbjct: 282 MMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQ 341
Query: 276 --DLVMGMLSTDPSQRLTARQVLDHSWMG 302
DL+ ML DP+QR+T + L H +
Sbjct: 342 LFDLMRRMLEFDPAQRITLAEALLHPFFA 370
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 33/210 (15%)
Query: 48 QLGWGQFGVIRVCS-DKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
QLG G FG + +C D A ++ + + D +R + EI+I+ L D
Sbjct: 14 QLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHS-----D 68
Query: 107 LKAVYEDEDY------VHLVMELCAGGELFHRLEKFGRFSEAEARVLFM-QLMQVVLYCH 159
Y Y + LVME G L L++ +A +L+ Q+ + + Y
Sbjct: 69 FIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG 128
Query: 160 EIGVVHRDLKPENILLATKASSSPIKLADFGLATYI----------EPGQSLLGTVGSPF 209
VHRDL NIL+ ++A +K+ADFGLA + EPGQS + F
Sbjct: 129 SRRCVHRDLAARNILVESEAH---VKIADFGLAKLLPLDKDXXVVREPGQSPI------F 179
Query: 210 YIAPEVLAGG-YNQAADVWSAGVILYILLS 238
+ APE L+ +++ +DVWS GV+LY L +
Sbjct: 180 WYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 120/259 (46%), Gaps = 21/259 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
RE L +LG G FG + + + T V A K++ T+ E ++ E ++M ++
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPG---TMSPEAFLQ-EAQVMKKIR 71
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-KFGRFSEAEARV-LFMQLMQVVLY 157
H +V L AV +E +++V E + G L L+ + G++ V + Q+ + Y
Sbjct: 72 -HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ VHRDL+ NIL+ K+ADFGLA IE + G+ F + APE
Sbjct: 130 VERMNYVHRDLRAANILVGENLVC---KVADFGLARLIEDNE-YTARQGAKFPIKWTAPE 185
Query: 215 -VLAGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
L G + +DVWS G++L L + G P+ G + D V R P P +
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPP--ECPE 242
Query: 273 SAKDLVMGMLSTDPSQRLT 291
S DL+ DP +R T
Sbjct: 243 SLHDLMCQCWRKDPEERPT 261
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 122/329 (37%), Gaps = 72/329 (21%)
Query: 39 LRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDER-SVKLEIEIMTR 97
L+ER+ + LG G FG + C D G+ +A + + R + +LEI ++ +
Sbjct: 26 LQERYEIVGNLGEGTFGKVVECLDHARGK----SQVALKIIRNVGKYREAARLEINVLKK 81
Query: 98 LSGHPNVVDLKAVYEDEDYVHLVMELCAGGEL-------FHRLEKFGRFSEAEARVLFMQ 150
+ V D+ + +C EL F + F + R + Q
Sbjct: 82 IKEKDKENKFLCVLMS-DWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQ 140
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLAT----------------KASSSPIKLADFGLATY 194
L + + HE + H DLKPENIL ++ I++ADFG AT+
Sbjct: 141 LCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF 200
Query: 195 IEPGQSLLGTVGSPFYIAPEV-LAGGYNQAADVWSAGVILYILLSG-------------- 239
+ + V + Y PEV L G+ Q DVWS G IL+ G
Sbjct: 201 DHEHHTTI--VATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLV 258
Query: 240 -MPPFWGNTKSRIFDAVRTADLRFPSN-PWD-------HISDSAK--------------- 275
M G S + R + WD ++ ++ K
Sbjct: 259 MMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQ 318
Query: 276 --DLVMGMLSTDPSQRLTARQVLDHSWMG 302
DL+ ML DP+QR+T + L H +
Sbjct: 319 LFDLMRRMLEFDPAQRITLAEALLHPFFA 347
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 116/259 (44%), Gaps = 21/259 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
RE L +LG G FG + + + T V A K++ + + E ++M +L
Sbjct: 184 RESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPGNM----SPEAFLQEAQVMKKLR 238
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-KFGRFSEAEARV-LFMQLMQVVLY 157
H +V L AV +E +++V E + G L L+ + G++ V + Q+ + Y
Sbjct: 239 -HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 296
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ VHRDL+ NIL+ K+ADFGL IE + G+ F + APE
Sbjct: 297 VERMNYVHRDLRAANILVGENLV---CKVADFGLGRLIEDNE-YTARQGAKFPIKWTAPE 352
Query: 215 -VLAGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
L G + +DVWS G++L L + G P+ G + D V R P P +
Sbjct: 353 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPP--ECPE 409
Query: 273 SAKDLVMGMLSTDPSQRLT 291
S DL+ DP +R T
Sbjct: 410 SLHDLMCQCWRKDPEERPT 428
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 120/259 (46%), Gaps = 21/259 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
RE L +LG G FG + + + T V A K++ T+ E ++ E ++M +L
Sbjct: 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPG---TMSPEAFLQ-EAQVMKKLR 320
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-KFGRFSEAEARV-LFMQLMQVVLY 157
H +V L AV +E +++V E + G L L+ + G++ V + Q+ + Y
Sbjct: 321 -HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 378
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ VHRDL+ NIL+ K+ADFGLA IE + G+ F + APE
Sbjct: 379 VERMNYVHRDLRAANILVGENLV---CKVADFGLARLIEDNE-YTARQGAKFPIKWTAPE 434
Query: 215 -VLAGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
L G + +DVWS G++L L + G P+ G + D V R P P +
Sbjct: 435 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPP--ECPE 491
Query: 273 SAKDLVMGMLSTDPSQRLT 291
S DL+ +P +R T
Sbjct: 492 SLHDLMCQCWRKEPEERPT 510
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 107/225 (47%), Gaps = 17/225 (7%)
Query: 49 LGWGQFGVIRVCSD--KFTGEVFACKSIAKDRLVTIDDERSVKL-EIEIMTRLSGHPNVV 105
+G G+FG VCS K G+ C +I + D +R L E IM + HPN++
Sbjct: 37 IGVGEFG--EVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFD-HPNII 93
Query: 106 DLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARVLFMQLMQVVLYCHEIGVV 164
L+ V V ++ E G L L K GRF+ + + + + Y ++ V
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAV 153
Query: 165 HRDLKPENILLATKASSSPIKLADFGLATYIEPG-QSLLGTVGSPF---YIAPEVLA-GG 219
HRDL NIL+ S+ K++DFG++ +E ++ T G + APE +A
Sbjct: 154 HRDLAARNILV---NSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 210
Query: 220 YNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFP 263
+ A+DVWS G++++ ++S G P+W + + A+ R P
Sbjct: 211 FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG-YRLP 254
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 42 RFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH 101
+ +GQ++G G FG V K+ G+V A K + T ++ K E+ ++ R + H
Sbjct: 9 QITVGQRIGSGSFGT--VYKGKWHGDV-AVKMLNVTA-PTPQQLQAFKNEVGVL-RKTRH 63
Query: 102 PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARVLFMQLMQVVLYCHE 160
N++ L Y + + +V + C G L+H L +F + + Q Q + Y H
Sbjct: 64 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEP---GQSLLGTVGSPFYIAPEVL- 216
++HRDLK NI L + +K+ DFGLAT GS ++APEV+
Sbjct: 123 KSIIHRDLKSNNIFLHEDLT---VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 217 ---AGGYNQAADVWSAGVILYILLSGMPPF 243
Y+ +DV++ G++LY L++G P+
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 110/226 (48%), Gaps = 17/226 (7%)
Query: 49 LGWGQFGVIRVCSD--KFTGEVFACKSIAKDRLVTIDDERSVKL-EIEIMTRLSGHPNVV 105
+G G+FG VCS K G+ +I ++ + +R L E IM + HPN++
Sbjct: 30 IGAGEFG--EVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNII 86
Query: 106 DLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARVLFMQLMQVVLYCHEIGVV 164
L+ V V +V E G L L+K G+F+ + + + + Y ++G V
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYV 146
Query: 165 HRDLKPENILLATKASSSPIKLADFGLATYIEPG-QSLLGTVGSPF---YIAPEVLA-GG 219
HRDL NIL+ S+ K++DFGL+ +E ++ T G + APE +A
Sbjct: 147 HRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRK 203
Query: 220 YNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFPS 264
+ A+DVWS G++++ ++S G P+W T + AV R PS
Sbjct: 204 FTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEG-YRLPS 248
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 125/264 (47%), Gaps = 24/264 (9%)
Query: 45 LGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNV 104
+ +++G G FG + ++ G A K I ++ + E+ IM RL HPN+
Sbjct: 41 IKEKIGAGSFGTVHRA--EWHGSDVAVK-ILMEQDFHAERVNEFLREVAIMKRLR-HPNI 96
Query: 105 VDLKAVYEDEDYVHLVMELCAGGELFHRLEKFG-RFSEAEARVLFM--QLMQVVLYCHEI 161
V + +V E + G L+ L K G R E R L M + + + Y H
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 162 G--VVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLG--TVGSPFYIAPEVLA 217
+VHRDLK N+L+ K + +K+ DFGL+ ++ L G+P ++APEVL
Sbjct: 157 NPPIVHRDLKSPNLLVDKKYT---VKVCDFGLSR-LKASXFLXSKXAAGTPEWMAPEVLR 212
Query: 218 G-GYNQAADVWSAGVILYILLSGMPPFWGN-TKSRIFDAV--RTADLRFPSNPWDHISDS 273
N+ +DV+S GVIL+ L + P WGN +++ AV + L P N ++
Sbjct: 213 DEPSNEKSDVYSFGVILWELATLQQP-WGNLNPAQVVAAVGFKCKRLEIPRN----LNPQ 267
Query: 274 AKDLVMGMLSTDPSQRLTARQVLD 297
++ G + +P +R + ++D
Sbjct: 268 VAAIIEGCWTNEPWKRPSFATIMD 291
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 120/259 (46%), Gaps = 21/259 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
RE L +LG G FG + + + T V A K++ T+ E ++ E ++M +L
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPG---TMSPEAFLQ-EAQVMKKLR 71
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-KFGRFSEAEARV-LFMQLMQVVLY 157
H +V L AV +E +++V E + G L L+ + G++ V + Q+ + Y
Sbjct: 72 -HEKLVQLYAVVSEEP-IYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ VHRDL+ NIL+ K+ADFGLA IE + G+ F + APE
Sbjct: 130 VERMNYVHRDLRAANILVGENLVC---KVADFGLARLIEDNE-YTARQGAKFPIKWTAPE 185
Query: 215 -VLAGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
L G + +DVWS G++L L + G P+ G + D V R P P +
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPP--ECPE 242
Query: 273 SAKDLVMGMLSTDPSQRLT 291
S DL+ DP +R T
Sbjct: 243 SLHDLMCQCWRKDPEERPT 261
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 119/259 (45%), Gaps = 21/259 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
RE L +LG G FG + + + T V A K++ T+ E ++ E ++M +L
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPG---TMSPEAFLQ-EAQVMKKLR 71
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-KFGRFSEAEARV-LFMQLMQVVLY 157
H +V L AV +E +++V E + G L L+ + G++ V + Q+ + Y
Sbjct: 72 -HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAY 129
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ VHRDL NIL+ K+ADFGLA IE + G+ F + APE
Sbjct: 130 VERMNYVHRDLAAANILVGENLVC---KVADFGLARLIEDNE-YTARQGAKFPIKWTAPE 185
Query: 215 -VLAGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
L G + +DVWS G++L L + G P+ G + D V R P P +
Sbjct: 186 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPP--ECPE 242
Query: 273 SAKDLVMGMLSTDPSQRLT 291
S DL+ DP +R T
Sbjct: 243 SLHDLMCQCWRKDPEERPT 261
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 122/329 (37%), Gaps = 72/329 (21%)
Query: 39 LRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDER-SVKLEIEIMTR 97
L+ER+ + LG G FG + C D G+ +A + + R + +LEI ++ +
Sbjct: 17 LQERYEIVGNLGEGTFGKVVECLDHARGK----SQVALKIIRNVGKYREAARLEINVLKK 72
Query: 98 LSGHPNVVDLKAVYEDEDYVHLVMELCAGGEL-------FHRLEKFGRFSEAEARVLFMQ 150
+ V D+ + +C EL F + F + R + Q
Sbjct: 73 IKEKDKENKFLCVLMS-DWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQ 131
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLAT----------------KASSSPIKLADFGLATY 194
L + + HE + H DLKPENIL ++ I++ADFG AT+
Sbjct: 132 LCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF 191
Query: 195 IEPGQSLLGTVGSPFYIAPEV-LAGGYNQAADVWSAGVILYILLSG-------------- 239
+ + V + Y PEV L G+ Q DVWS G IL+ G
Sbjct: 192 DHEHHTTI--VATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLV 249
Query: 240 -MPPFWGNTKSRIFDAVRTADLRFPSN-PWD-------HISDSAK--------------- 275
M G S + R + WD ++ ++ K
Sbjct: 250 MMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQ 309
Query: 276 --DLVMGMLSTDPSQRLTARQVLDHSWMG 302
DL+ ML DP+QR+T + L H +
Sbjct: 310 LFDLMRRMLEFDPAQRITLAEALLHPFFA 338
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 107/225 (47%), Gaps = 17/225 (7%)
Query: 49 LGWGQFGVIRVCSD--KFTGEVFACKSIAKDRLVTIDDERSVKL-EIEIMTRLSGHPNVV 105
+G G+FG VCS K G+ C +I + D +R L E IM + HPN++
Sbjct: 22 IGVGEFG--EVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFD-HPNII 78
Query: 106 DLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARVLFMQLMQVVLYCHEIGVV 164
L+ V V ++ E G L L K GRF+ + + + + Y ++ V
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYV 138
Query: 165 HRDLKPENILLATKASSSPIKLADFGLATYIEPG-QSLLGTVGSPF---YIAPEVLA-GG 219
HRDL NIL+ S+ K++DFG++ +E ++ T G + APE +A
Sbjct: 139 HRDLAARNILV---NSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 195
Query: 220 YNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFP 263
+ A+DVWS G++++ ++S G P+W + + A+ R P
Sbjct: 196 FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG-YRLP 239
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 103/217 (47%), Gaps = 15/217 (6%)
Query: 34 NQISNLRER--FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDD-ERSVKL 90
N +N ER V G ++G G FGV V A K +A +T ++ ++
Sbjct: 22 NVTNNFDERPISVGGNKMGEGGFGV--VYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQ 79
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEA--EARVLF 148
EI++M + H N+V+L D D + LV G L RL R
Sbjct: 80 EIKVMAKCQ-HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKI 138
Query: 149 MQ-LMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEP-GQSLLGT-- 204
Q + + HE +HRD+K NILL ++ K++DFGLA E Q+++ +
Sbjct: 139 AQGAANGINFLHENHHIHRDIKSANILLDEAFTA---KISDFGLARASEKFAQTVMXSRI 195
Query: 205 VGSPFYIAPEVLAGGYNQAADVWSAGVILYILLSGMP 241
VG+ Y+APE L G +D++S GV+L +++G+P
Sbjct: 196 VGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 102/210 (48%), Gaps = 17/210 (8%)
Query: 42 RFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH 101
+ +GQ++G G FG V K+ G+V A K + T ++ K E+ ++ R + H
Sbjct: 9 QITVGQRIGSGSFGT--VYKGKWHGDV-AVKMLNVTA-PTPQQLQAFKNEVGVL-RKTRH 63
Query: 102 PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARVLFMQLMQVVLYCHE 160
N++ L Y + + +V + C G L+H L +F + + Q Q + Y H
Sbjct: 64 VNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLAT---YIEPGQSLLGTVGSPFYIAPEVL- 216
++HRDLK NI L + +K+ DFGLAT GS ++APEV+
Sbjct: 123 KSIIHRDLKSNNIFLHEDLT---VKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 217 ---AGGYNQAADVWSAGVILYILLSGMPPF 243
Y+ +DV++ G++LY L++G P+
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/267 (28%), Positives = 126/267 (47%), Gaps = 30/267 (11%)
Query: 45 LGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNV 104
+ +++G G FG + ++ G A K I ++ + E+ IM RL HPN+
Sbjct: 41 IKEKIGAGSFGTVHRA--EWHGSDVAVK-ILMEQDFHAERVNEFLREVAIMKRLR-HPNI 96
Query: 105 VDLKAVYEDEDYVHLVMELCAGGELFHRLEKFG-RFSEAEARVLFM--QLMQVVLYCHEI 161
V + +V E + G L+ L K G R E R L M + + + Y H
Sbjct: 97 VLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR 156
Query: 162 G--VVHRDLKPENILLATKASSSPIKLADFGL-----ATYIEPGQSLLGTVGSPFYIAPE 214
+VHR+LK N+L+ K + +K+ DFGL +T++ S G+P ++APE
Sbjct: 157 NPPIVHRNLKSPNLLVDKKYT---VKVCDFGLSRLKASTFL----SSKSAAGTPEWMAPE 209
Query: 215 VLAG-GYNQAADVWSAGVILYILLSGMPPFWGN-TKSRIFDAV--RTADLRFPSNPWDHI 270
VL N+ +DV+S GVIL+ L + P WGN +++ AV + L P N +
Sbjct: 210 VLRDEPSNEKSDVYSFGVILWELATLQQP-WGNLNPAQVVAAVGFKCKRLEIPRN----L 264
Query: 271 SDSAKDLVMGMLSTDPSQRLTARQVLD 297
+ ++ G + +P +R + ++D
Sbjct: 265 NPQVAAIIEGCWTNEPWKRPSFATIMD 291
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 120/259 (46%), Gaps = 21/259 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
RE L +LG G FG + + + T V A K++ T+ E ++ E ++M +L
Sbjct: 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPG---TMSPEAFLQ-EAQVMKKLR 237
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-KFGRFSEAEARV-LFMQLMQVVLY 157
H +V L AV +E +++V E + G L L+ + G++ V + Q+ + Y
Sbjct: 238 -HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 295
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ VHRDL+ NIL+ K+ADFGLA IE + G+ F + APE
Sbjct: 296 VERMNYVHRDLRAANILVGENLV---CKVADFGLARLIEDNE-YTARQGAKFPIKWTAPE 351
Query: 215 -VLAGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
L G + +DVWS G++L L + G P+ G + D V R P P +
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPP--ECPE 408
Query: 273 SAKDLVMGMLSTDPSQRLT 291
S DL+ +P +R T
Sbjct: 409 SLHDLMCQCWRKEPEERPT 427
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 107/225 (47%), Gaps = 17/225 (7%)
Query: 49 LGWGQFGVIRVCSD--KFTGEVFACKSIAKDRLVTIDDERSVKL-EIEIMTRLSGHPNVV 105
+G G+FG VCS K G+ C +I + D +R L E IM + HPN++
Sbjct: 16 IGVGEFG--EVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFD-HPNII 72
Query: 106 DLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARVLFMQLMQVVLYCHEIGVV 164
L+ V V ++ E G L L K GRF+ + + + + Y ++ V
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYV 132
Query: 165 HRDLKPENILLATKASSSPIKLADFGLATYIEPG-QSLLGTVGSPF---YIAPEVLA-GG 219
HRDL NIL+ S+ K++DFG++ +E ++ T G + APE +A
Sbjct: 133 HRDLAARNILV---NSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRK 189
Query: 220 YNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFP 263
+ A+DVWS G++++ ++S G P+W + + A+ R P
Sbjct: 190 FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEG-YRLP 233
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 131/312 (41%), Gaps = 63/312 (20%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+R+ + +G G G++ D A K +++ +R+ + E+ +M +
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVLM-KCVN 81
Query: 101 HPNVVDLKAVY------EDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQV 154
H N++ L V+ E+ V++VMEL L ++ L Q++
Sbjct: 82 HKNIIGLLNVFTPQKSLEEFQDVYIVMEL-MDANLCQVIQM--ELDHERMSYLLYQMLCG 138
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPE 214
+ + H G++HRDLKP NI++ + + +K+ DFGLA + V + +Y APE
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCT---LKILDFGLARTAGTSFMMEPEVVTRYYRAPE 195
Query: 215 VLAG-GYNQAADVWSAGVIL------YILLSG---------------------------- 239
V+ G GY + D+WS G I+ IL G
Sbjct: 196 VILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPT 255
Query: 240 -------MPPFWGNTKSRIFDAVRTADLRFPSNPWDH--ISDSAKDLVMGMLSTDPSQRL 290
P + G + ++F D+ FP++ + + A+DL+ ML D S+R+
Sbjct: 256 VRTYVENRPKYAGYSFEKLF-----PDVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310
Query: 291 TARQVLDHSWMG 302
+ + L H ++
Sbjct: 311 SVDEALQHPYIN 322
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 120/259 (46%), Gaps = 21/259 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
RE L +LG G FG + + + T V A K++ T+ E ++ E ++M +L
Sbjct: 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPG---TMSPEAFLQ-EAQVMKKLR 237
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-KFGRFSEAEARV-LFMQLMQVVLY 157
H +V L AV +E +++V E + G L L+ + G++ V + Q+ + Y
Sbjct: 238 -HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 295
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ VHRDL+ NIL+ K+ADFGLA IE + G+ F + APE
Sbjct: 296 VERMNYVHRDLRAANILVGENLV---CKVADFGLARLIEDNE-YTARQGAKFPIKWTAPE 351
Query: 215 -VLAGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
L G + +DVWS G++L L + G P+ G + D V R P P +
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPP--ECPE 408
Query: 273 SAKDLVMGMLSTDPSQRLT 291
S DL+ +P +R T
Sbjct: 409 SLHDLMCQCWRKEPEERPT 427
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 106/231 (45%), Gaps = 23/231 (9%)
Query: 47 QQLGWGQFGVIRVCSD--KFTG--EVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHP 102
Q +G G+FG VCS K G E+F K T R E IM + HP
Sbjct: 13 QVIGAGEFG--EVCSGHLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASIMGQFD-HP 68
Query: 103 NVVDLKAVYEDEDYVHLVMELCAGGEL--FHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
NV+ L+ V V ++ E G L F R + G+F+ + + + + Y +
Sbjct: 69 NVIHLEGVVTKSTPVMIITEFMENGSLDSFLR-QNDGQFTVIQLVGMLRGIAAGMKYLAD 127
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQS------LLGTVGSPFYIAPE 214
+ VHR L NIL+ S+ K++DFGL+ ++E S LG + APE
Sbjct: 128 MNYVHRALAARNILVN---SNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPE 184
Query: 215 VLA-GGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFP 263
+ + A+DVWS G++++ ++S G P+W T + +A+ D R P
Sbjct: 185 AIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQ-DYRLP 234
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 116/280 (41%), Gaps = 51/280 (18%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
+G G FG + + G+ + R V ++E++ + E++ + +L H N+V
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVI------RRVKYNNEKAER-EVKALAKLD-HVNIVHYN 71
Query: 109 AVYEDEDY-----------------------------VHLVMELCAGGELFHRLEKFG-- 137
++ DY + + ME C G L +EK
Sbjct: 72 GCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 131
Query: 138 RFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEP 197
+ + A LF Q+ + V Y H ++HRDLKP NI L + +K+ DFGL T ++
Sbjct: 132 KLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFL---VDTKQVKIGDFGLVTSLKN 188
Query: 198 GQSLLGTVGSPFYIAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVR 256
+ G+ Y++PE ++ Y + D+++ G+IL LL + S+ F +R
Sbjct: 189 DGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET--SKFFTDLR 246
Query: 257 TADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVL 296
+ D K L+ +LS P R ++L
Sbjct: 247 DGIIS------DIFDKKEKTLLQKLLSKKPEDRPNTSEIL 280
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 119/268 (44%), Gaps = 24/268 (8%)
Query: 48 QLGWGQFGVIRVCSD-KFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
++G G F + D + T EV C+ +DR +T + + K E E + L HPN+V
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCE--LQDRKLTKSERQRFKEEAEXLKGLQ-HPNIVR 89
Query: 107 LKAVYED----EDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIG 162
+E + + LV EL G L L++F R Q+++ + + H
Sbjct: 90 FYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRT 149
Query: 163 --VVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAGGY 220
++HRDLK +NI + S +K+ D GLAT ++ +G+P + APE Y
Sbjct: 150 PPIIHRDLKCDNIFITGPTGS--VKIGDLGLAT-LKRASFAKAVIGTPEFXAPEXYEEKY 206
Query: 221 NQAADVWSAGVILYILLSGMPPF-----WGNTKSRIFDAVRTADLRFPSNPWDHISDSAK 275
+++ DV++ G + P+ R+ V+ A + P K
Sbjct: 207 DESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIP------EVK 260
Query: 276 DLVMGMLSTDPSQRLTARQVLDHSWMGD 303
+++ G + + +R + + +L+H++ +
Sbjct: 261 EIIEGCIRQNKDERYSIKDLLNHAFFQE 288
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 126/281 (44%), Gaps = 27/281 (9%)
Query: 32 DTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLE 91
+ N + NL E +G G G + + TG V A K + R ++ + + ++
Sbjct: 23 EINDLENLGE-------MGSGTCGQVWKMRFRKTGHVIAVKQMR--RSGNKEENKRILMD 73
Query: 92 IEIMTRLSGHPNVVDLKAVYEDEDYVHLVMEL---CAGGELFHRLEKFGRFSEAEARVLF 148
++++ + P +V + V + MEL CA +L R++ G E +
Sbjct: 74 LDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAE-KLKKRMQ--GPIPERILGKMT 130
Query: 149 MQLMQVVLYCHEI-GVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGS 207
+ +++ + Y E GV+HRD+KP NILL + IKL DFG++ + ++ + G
Sbjct: 131 VAIVKALYYLKEKHGVIHRDVKPSNILLDERGQ---IKLCDFGISGRLVDDKAKDRSAGC 187
Query: 208 PFYIAPEVL------AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLR 261
Y+APE + Y+ ADVWS G+ L L +G P+ N K+ +
Sbjct: 188 AAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPY-KNCKTDFEVLTKVLQEE 246
Query: 262 FPSNPWDH-ISDSAKDLVMGMLSTDPSQRLTARQVLDHSWM 301
P P S + V L+ D +R ++L+HS++
Sbjct: 247 PPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFI 287
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 102/217 (47%), Gaps = 15/217 (6%)
Query: 34 NQISNLRER--FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDD-ERSVKL 90
N +N ER V G ++G G FGV V A K +A +T ++ ++
Sbjct: 22 NVTNNFDERPISVGGNKMGEGGFGV--VYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQ 79
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEA--EARVLF 148
EI++M + H N+V+L D D + LV G L RL R
Sbjct: 80 EIKVMAKCQ-HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKI 138
Query: 149 MQ-LMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEP-GQSLLGT-- 204
Q + + HE +HRD+K NILL ++ K++DFGLA E Q+++
Sbjct: 139 AQGAANGINFLHENHHIHRDIKSANILLDEAFTA---KISDFGLARASEKFAQTVMXXRI 195
Query: 205 VGSPFYIAPEVLAGGYNQAADVWSAGVILYILLSGMP 241
VG+ Y+APE L G +D++S GV+L +++G+P
Sbjct: 196 VGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 104/217 (47%), Gaps = 18/217 (8%)
Query: 42 RFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH 101
+ +GQ++G G FG V K+ G+V A K + T ++ K E+ ++ R + H
Sbjct: 9 QITVGQRIGSGSFGT--VYKGKWHGDV-AVKMLNVTA-PTPQQLQAFKNEVGVL-RKTRH 63
Query: 102 PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARVLFMQLMQVVLYCHE 160
N++ L Y + +V + C G L+H L +F + + Q Q + Y H
Sbjct: 64 VNIL-LFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHA 122
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEP---GQSLLGTVGSPFYIAPEVL- 216
++HRDLK NI L + +K+ DFGLAT GS ++APEV+
Sbjct: 123 KSIIHRDLKSNNIFLHEDLT---VKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIR 179
Query: 217 ---AGGYNQAADVWSAGVILYILLSGMPPFWGNTKSR 250
Y+ +DV++ G++LY L++G P+ N +R
Sbjct: 180 MQDKNPYSFQSDVYAFGIVLYELMTGQLPY-SNINNR 215
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 107/235 (45%), Gaps = 23/235 (9%)
Query: 31 LDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL---VTIDDERS 87
LD IS + + +G G+FG VCS + S+A L T R
Sbjct: 42 LDATNIS-------IDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD 92
Query: 88 VKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARV 146
E IM + HPN++ L+ V V +V E G L L K +F+ +
Sbjct: 93 FLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 151
Query: 147 LFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPG-QSLLGTV 205
+ + + Y ++G VHRDL NIL+ S+ K++DFGLA +E ++ T
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLARVLEDDPEAAYTTR 208
Query: 206 GSPF---YIAPEVLA-GGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAV 255
G + +PE +A + A+DVWS G++L+ ++S G P+W + + AV
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 23/211 (10%)
Query: 44 VLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPN 103
+L ++G G FG V K+ G+V A K I K T + ++ + E+ ++ R + H N
Sbjct: 39 MLSTRIGSGSFGT--VYKGKWHGDV-AVK-ILKVVDPTPEQFQAFRNEVAVL-RKTRHVN 93
Query: 104 VVDLKAVYEDEDYVHLVMELCAGGELFHRLE----KFGRFSEAEARVLFMQLMQVVLYCH 159
++ L Y +D + +V + C G L+ L KF F + + Q Q + Y H
Sbjct: 94 IL-LFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLID---IARQTAQGMDYLH 149
Query: 160 EIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEP---GQSLLGTVGSPFYIAPEVL 216
++HRD+K NI L + +K+ DFGLAT Q + GS ++APEV+
Sbjct: 150 AKNIIHRDMKSNNIFLHEGLT---VKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVI 206
Query: 217 AGGYNQ----AADVWSAGVILYILLSGMPPF 243
N +DV+S G++LY L++G P+
Sbjct: 207 RMQDNNPFSFQSDVYSYGIVLYELMTGELPY 237
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 107/236 (45%), Gaps = 46/236 (19%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTID--------DERSVKLEI 92
E VLG+Q+G G FG EVF+ + A + LV + D ++ L+
Sbjct: 114 EDLVLGEQIGRGNFG-----------EVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQE 162
Query: 93 EIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLM 152
+ + HPN+V L V + +++VMEL GG+ L G AR+ L+
Sbjct: 163 ARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG------ARLRVKTLL 216
Query: 153 QVV-------LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTV 205
Q+V Y +HRDL N L+ K + +K++DFG++ E +
Sbjct: 217 QMVGDAAAGMEYLESKCCIHRDLAARNCLVTEK---NVLKISDFGMSR--EEADGVYAAS 271
Query: 206 GS----PF-YIAPEVL-AGGYNQAADVWSAGVILYILLS-GMPPF--WGNTKSRIF 252
G P + APE L G Y+ +DVWS G++L+ S G P+ N ++R F
Sbjct: 272 GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREF 327
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 107/236 (45%), Gaps = 46/236 (19%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTID--------DERSVKLEI 92
E VLG+Q+G G FG EVF+ + A + LV + D ++ L+
Sbjct: 114 EDLVLGEQIGRGNFG-----------EVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQE 162
Query: 93 EIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLM 152
+ + HPN+V L V + +++VMEL GG+ L G AR+ L+
Sbjct: 163 ARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEG------ARLRVKTLL 216
Query: 153 QVV-------LYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTV 205
Q+V Y +HRDL N L+ K + +K++DFG++ E +
Sbjct: 217 QMVGDAAAGMEYLESKCCIHRDLAARNCLVTEK---NVLKISDFGMSR--EEADGVXAAS 271
Query: 206 GS----PF-YIAPEVL-AGGYNQAADVWSAGVILYILLS-GMPPF--WGNTKSRIF 252
G P + APE L G Y+ +DVWS G++L+ S G P+ N ++R F
Sbjct: 272 GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREF 327
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 141/329 (42%), Gaps = 72/329 (21%)
Query: 42 RFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH 101
R++L ++LGWG F + + D A K + D++ T + + EI+++ R++
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYT----EAAEDEIKLLQRVNDA 75
Query: 102 PNVVD--------LKAV----YEDEDYVHLVMELCAGGE----LFHRLEKFGRFSEAEAR 145
N + LK + ++ + VH+VM GE L + E G +
Sbjct: 76 DNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRG-IPLIYVK 134
Query: 146 VLFMQLMQVVLYCH-EIGVVHRDLKPENILLATKASSS---PIKLADFGLATYIEPGQSL 201
+ QL+ + Y H G++H D+KPEN+L+ S IK+AD G A + + +
Sbjct: 135 QISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD--EHY 192
Query: 202 LGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILYILLSG---MPPFWGNTKSRIFDAV-- 255
++ + Y +PEVL G + AD+WS +++ L++G P G++ ++ D +
Sbjct: 193 TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQ 252
Query: 256 -------------------RT-----------ADLRF------PSNPWDHISDSAK---D 276
RT + L+F + + D AK D
Sbjct: 253 IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISD 312
Query: 277 LVMGMLSTDPSQRLTARQVLDHSWMGDGI 305
+ ML DP +R A +++H W+ D +
Sbjct: 313 FLSPMLQLDPRKRADAGGLVNHPWLKDTL 341
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 141/329 (42%), Gaps = 72/329 (21%)
Query: 42 RFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH 101
R++L ++LGWG F + + D A K + D++ T + + EI+++ R++
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYT----EAAEDEIKLLQRVNDA 75
Query: 102 PNVVD--------LKAV----YEDEDYVHLVMELCAGGE----LFHRLEKFGRFSEAEAR 145
N + LK + ++ + VH+VM GE L + E G +
Sbjct: 76 DNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRG-IPLIYVK 134
Query: 146 VLFMQLMQVVLYCH-EIGVVHRDLKPENILLATKASSS---PIKLADFGLATYIEPGQSL 201
+ QL+ + Y H G++H D+KPEN+L+ S IK+AD G A + + +
Sbjct: 135 QISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD--EHY 192
Query: 202 LGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILYILLSG---MPPFWGNTKSRIFDAV-- 255
++ + Y +PEVL G + AD+WS +++ L++G P G++ ++ D +
Sbjct: 193 TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQ 252
Query: 256 -------------------RT-----------ADLRF------PSNPWDHISDSAK---D 276
RT + L+F + + D AK D
Sbjct: 253 IIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISD 312
Query: 277 LVMGMLSTDPSQRLTARQVLDHSWMGDGI 305
+ ML DP +R A +++H W+ D +
Sbjct: 313 FLSPMLQLDPRKRADAGGLVNHPWLKDTL 341
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 120/259 (46%), Gaps = 21/259 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
RE L +LG G FG + + + T V A K++ T+ E ++ E ++M +L
Sbjct: 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPG---TMSPEAFLQ-EAQVMKKLR 237
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-KFGRFSEAEARV-LFMQLMQVVLY 157
H +V L AV +E +++V E + G L L+ + G++ V + Q+ + Y
Sbjct: 238 -HEKLVQLYAVVSEEP-IYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 295
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ VHRDL+ NIL+ K+ADFGLA IE + G+ F + APE
Sbjct: 296 VERMNYVHRDLRAANILVGENLV---CKVADFGLARLIEDNE-YTARQGAKFPIKWTAPE 351
Query: 215 -VLAGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
L G + +DVWS G++L L + G P+ G + D V R P P +
Sbjct: 352 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPP--ECPE 408
Query: 273 SAKDLVMGMLSTDPSQRLT 291
S DL+ +P +R T
Sbjct: 409 SLHDLMCQCWRKEPEERPT 427
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 16/218 (7%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
Q++G GQFG++ + + A K+I + + E E E+M +LS HP +V
Sbjct: 13 QEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAM----SEEDFIEEAEVMMKLS-HPKLVQ 66
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLE-KFGRFSEAEARVLFMQLMQVVLYCHEIGVVH 165
L V ++ + LV E G L L + G F+ + + + + + Y E V+H
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEASVIH 126
Query: 166 RDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPEVLA-GGYN 221
RDL N L+ + IK++DFG+ ++ Q T G+ F + +PEV + Y+
Sbjct: 127 RDLAARNCLV---GENQVIKVSDFGMTRFVLDDQYTSST-GTKFPVKWASPEVFSFSRYS 182
Query: 222 QAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTA 258
+DVWS GV+++ + S G P+ + S + + + T
Sbjct: 183 SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 220
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 120/259 (46%), Gaps = 21/259 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
RE L +LG G FG + + + T V A K++ T+ E ++ E ++M +L
Sbjct: 10 RESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPG---TMSPEAFLQ-EAQVMKKLR 64
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-KFGRFSEAEARV-LFMQLMQVVLY 157
H +V L AV +E +++V E + G L L+ + G++ V + Q+ + Y
Sbjct: 65 -HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 122
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ VHRDL+ NIL+ K+ADFGLA IE + G+ F + APE
Sbjct: 123 VERMNYVHRDLRAANILVGENLVC---KVADFGLARLIEDNE-YTARQGAKFPIKWTAPE 178
Query: 215 -VLAGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
L G + +DVWS G++L L + G P+ G + D V R P P +
Sbjct: 179 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPP--ECPE 235
Query: 273 SAKDLVMGMLSTDPSQRLT 291
S DL+ +P +R T
Sbjct: 236 SLHDLMCQCWRKEPEERPT 254
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 107/222 (48%), Gaps = 24/222 (10%)
Query: 47 QQLGWGQFGVIRV----CSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHP 102
Q++G GQFG++ + DK + S+++D + E E+M +LS HP
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIE---------EAEVMMKLS-HP 82
Query: 103 NVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-KFGRFSEAEARVLFMQLMQVVLYCHEI 161
+V L V ++ + LV E G L L + G F+ + + + + + Y E
Sbjct: 83 KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 142
Query: 162 GVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPEVLA- 217
V+HRDL N L+ + IK++DFG+ ++ Q T G+ F + +PEV +
Sbjct: 143 CVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVLDDQYTSST-GTKFPVKWASPEVFSF 198
Query: 218 GGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTA 258
Y+ +DVWS GV+++ + S G P+ + S + + + T
Sbjct: 199 SRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 240
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 101/217 (46%), Gaps = 15/217 (6%)
Query: 34 NQISNLRER--FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDD-ERSVKL 90
N +N ER V G ++G G FGV V A K +A +T ++ ++
Sbjct: 16 NVTNNFDERPISVGGNKMGEGGFGV--VYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQ 73
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEA--EARVLF 148
EI++M + H N+V+L D D + LV G L RL R
Sbjct: 74 EIKVMAKCQ-HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKI 132
Query: 149 MQ-LMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEP-GQSLLGT-- 204
Q + + HE +HRD+K NILL ++ K++DFGLA E Q ++
Sbjct: 133 AQGAANGINFLHENHHIHRDIKSANILLDEAFTA---KISDFGLARASEKFAQXVMXXRI 189
Query: 205 VGSPFYIAPEVLAGGYNQAADVWSAGVILYILLSGMP 241
VG+ Y+APE L G +D++S GV+L +++G+P
Sbjct: 190 VGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLP 226
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 108/219 (49%), Gaps = 18/219 (8%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
Q++G GQFG++ + + A K+I + + E E E+M +LS HP +V
Sbjct: 11 QEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAM----SEEDFIEEAEVMMKLS-HPKLVQ 64
Query: 107 LKAVYEDEDYVHLVMELCAGGEL--FHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVV 164
L V ++ + LV E G L + R ++ G F+ + + + + + Y E V+
Sbjct: 65 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVI 123
Query: 165 HRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPEVLA-GGY 220
HRDL N L+ + IK++DFG+ ++ Q T G+ F + +PEV + Y
Sbjct: 124 HRDLAARNCLVG---ENQVIKVSDFGMTRFVLDDQYTSST-GTKFPVKWASPEVFSFSRY 179
Query: 221 NQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTA 258
+ +DVWS GV+++ + S G P+ + S + + + T
Sbjct: 180 SSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 218
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 16/218 (7%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
Q++G GQFG++ + + A K+I + + E E E+M +LS HP +V
Sbjct: 16 QEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAM----SEEDFIEEAEVMMKLS-HPKLVQ 69
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLE-KFGRFSEAEARVLFMQLMQVVLYCHEIGVVH 165
L V ++ + LV E G L L + G F+ + + + + + Y E V+H
Sbjct: 70 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 129
Query: 166 RDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPEVLA-GGYN 221
RDL N L+ + IK++DFG+ ++ Q T G+ F + +PEV + Y+
Sbjct: 130 RDLAARNCLVG---ENQVIKVSDFGMTRFVLDDQYTSST-GTKFPVKWASPEVFSFSRYS 185
Query: 222 QAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTA 258
+DVWS GV+++ + S G P+ + S + + + T
Sbjct: 186 SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 223
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 16/218 (7%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
Q++G GQFG++ + + A K+I + + E E E+M +LS HP +V
Sbjct: 13 QEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAM----SEEDFIEEAEVMMKLS-HPKLVQ 66
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLE-KFGRFSEAEARVLFMQLMQVVLYCHEIGVVH 165
L V ++ + LV E G L L + G F+ + + + + + Y E V+H
Sbjct: 67 LYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 126
Query: 166 RDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPEVLA-GGYN 221
RDL N L+ + IK++DFG+ ++ Q T G+ F + +PEV + Y+
Sbjct: 127 RDLAARNCLVG---ENQVIKVSDFGMTRFVLDDQYTSST-GTKFPVKWASPEVFSFSRYS 182
Query: 222 QAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTA 258
+DVWS GV+++ + S G P+ + S + + + T
Sbjct: 183 SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 220
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 111/270 (41%), Gaps = 32/270 (11%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
+G G FG + K G + DD R E+E++ +L HPN+++L
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 92
Query: 109 AVYEDEDYVHLVMELCAGGELFHRLEK---------FGRFSEAEARVLFMQLMQVVL--- 156
E Y++L +E G L L K F + + + QL+
Sbjct: 93 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 152
Query: 157 ----YCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA----TYIEPGQSLLGTVGSP 208
Y + +HRDL NIL+ + K+ADFGL+ Y+ + +G +
Sbjct: 153 RGMDYLSQKQFIHRDLAARNILVGENYVA---KIADFGLSRGQEVYV---KKTMGRLPVR 206
Query: 209 FYIAPEVLAGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAV-RTADLRFPSNP 266
+ + Y +DVWS GV+L+ ++S G P+ G T + +++ + + L P N
Sbjct: 207 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLN- 265
Query: 267 WDHISDSAKDLVMGMLSTDPSQRLTARQVL 296
D DL+ P +R + Q+L
Sbjct: 266 ---CDDEVYDLMRQCWREKPYERPSFAQIL 292
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 23/235 (9%)
Query: 31 LDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL---VTIDDERS 87
LD IS + + +G G+FG VCS + S+A L T R
Sbjct: 42 LDATNIS-------IDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD 92
Query: 88 VKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARV 146
E IM + HPN++ L+ V V +V E G L L K +F+ +
Sbjct: 93 FLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVG 151
Query: 147 LFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPG-QSLLGTV 205
+ + + Y ++G VHRDL NIL+ S+ K++DFGL+ +E ++ T
Sbjct: 152 MLRGIASGMKYLSDMGAVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 206 GSPF---YIAPEVLA-GGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAV 255
G + +PE +A + A+DVWS G++L+ ++S G P+W + + AV
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 111/270 (41%), Gaps = 32/270 (11%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
+G G FG + K G + DD R E+E++ +L HPN+++L
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 82
Query: 109 AVYEDEDYVHLVMELCAGGELFHRLEK---------FGRFSEAEARVLFMQLMQVVL--- 156
E Y++L +E G L L K F + + + QL+
Sbjct: 83 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 142
Query: 157 ----YCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA----TYIEPGQSLLGTVGSP 208
Y + +HRDL NIL+ + K+ADFGL+ Y+ + +G +
Sbjct: 143 RGMDYLSQKQFIHRDLAARNILVGENYVA---KIADFGLSRGQEVYV---KKTMGRLPVR 196
Query: 209 FYIAPEVLAGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAV-RTADLRFPSNP 266
+ + Y +DVWS GV+L+ ++S G P+ G T + +++ + + L P N
Sbjct: 197 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLN- 255
Query: 267 WDHISDSAKDLVMGMLSTDPSQRLTARQVL 296
D DL+ P +R + Q+L
Sbjct: 256 ---CDDEVYDLMRQCWREKPYERPSFAQIL 282
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 23/235 (9%)
Query: 31 LDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL---VTIDDERS 87
LD IS + + +G G+FG VCS + S+A L T R
Sbjct: 13 LDATNIS-------IDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD 63
Query: 88 VKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARV 146
E IM + HPN++ L+ V V +V E G L L K +F+ +
Sbjct: 64 FLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 122
Query: 147 LFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPG-QSLLGTV 205
+ + + Y ++G VHRDL NIL+ S+ K++DFGL+ +E ++ T
Sbjct: 123 MLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
Query: 206 GSPF---YIAPEVLA-GGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAV 255
G + +PE +A + A+DVWS G++L+ ++S G P+W + + AV
Sbjct: 180 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 234
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 124/263 (47%), Gaps = 19/263 (7%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
RE L ++LG GQFGV+++ K+ G+ + K+ ++ D+ E + M +LS
Sbjct: 7 REEITLLKELGSGQFGVVKL--GKWKGQYDVAVKMIKEGSMSEDEFFQ---EAQTMMKLS 61
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSE-AEARVLFMQLMQVVLYC 158
HP +V V E +++V E + G L + L G+ E ++ + + + + +
Sbjct: 62 -HPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFL 120
Query: 159 HEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPEV 215
+HRDL N L+ +K++DFG+ Y+ Q + +VG+ F + APEV
Sbjct: 121 ESHQFIHRDLAARNCLVDRDLC---VKVSDFGMTRYVLDDQ-YVSSVGTKFPVKWSAPEV 176
Query: 216 LAG-GYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISDS 273
Y+ +DVW+ G++++ + S G P+ T S + V + + SD+
Sbjct: 177 FHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHL---ASDT 233
Query: 274 AKDLVMGMLSTDPSQRLTARQVL 296
++ P +R T +Q+L
Sbjct: 234 IYQIMYSCWHELPEKRPTFQQLL 256
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 11/199 (5%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDL 107
+LG G GV+ S K +G V A K I + I ++ + E++++ + P +V
Sbjct: 75 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ--IIRELQVLHECNS-PYIVGF 131
Query: 108 KAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEI-GVVHR 166
+ + + + ME GG L L+K GR E + + +++ + Y E ++HR
Sbjct: 132 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 191
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT-VGSPFYIAPEVLAG-GYNQAA 224
D+KP NIL+ ++ IKL DFG++ + S+ + VG+ Y++PE L G Y+ +
Sbjct: 192 DVKPSNILVNSRGE---IKLCDFGVSGQLI--DSMANSFVGTRSYMSPERLQGTHYSVQS 246
Query: 225 DVWSAGVILYILLSGMPPF 243
D+WS G+ L + G P
Sbjct: 247 DIWSMGLSLVEMAVGRYPI 265
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 109/228 (47%), Gaps = 27/228 (11%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
RE L ++LG GQFG + + + +V A K++ + ++ E +M L
Sbjct: 12 RESIKLVKRLGAGQFGEVWMGYYNNSTKV-AVKTLKPGTMSV----QAFLEEANLMKTLQ 66
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLF-------MQLM 152
H +V L AV E+ ++++ E A G L L+ S+ +VL Q+
Sbjct: 67 -HDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLK-----SDEGGKVLLPKLIDFSAQIA 120
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF--- 209
+ + Y +HRDL+ N+L++ S K+ADFGLA IE + G+ F
Sbjct: 121 EGMAYIERKNYIHRDLRAANVLVS---ESLMCKIADFGLARVIEDNE-YTAREGAKFPIK 176
Query: 210 YIAPEVLA-GGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIFDAV 255
+ APE + G + +DVWS G++LY I+ G P+ G T + + A+
Sbjct: 177 WTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADVMTAL 224
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 23/235 (9%)
Query: 31 LDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL---VTIDDERS 87
LD IS + + +G G+FG VCS + S+A L T R
Sbjct: 13 LDATNIS-------IDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD 63
Query: 88 VKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARV 146
E IM + HPN++ L+ V V +V E G L L K +F+ +
Sbjct: 64 FLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVG 122
Query: 147 LFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPG-QSLLGTV 205
+ + + Y ++G VHRDL NIL+ S+ K++DFGL+ +E ++ T
Sbjct: 123 MLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTR 179
Query: 206 GSPF---YIAPEVLA-GGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAV 255
G + +PE +A + A+DVWS G++L+ ++S G P+W + + AV
Sbjct: 180 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 234
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 23/235 (9%)
Query: 31 LDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL---VTIDDERS 87
LD IS + + +G G+FG VCS + S+A L T R
Sbjct: 42 LDATNIS-------IDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD 92
Query: 88 VKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARV 146
E IM + HPN++ L+ V V +V E G L L K +F+ +
Sbjct: 93 FLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 151
Query: 147 LFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPG-QSLLGTV 205
+ + + Y ++G VHRDL NIL+ S+ K++DFGL+ +E ++ T
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 206 GSPF---YIAPEVLA-GGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAV 255
G + +PE +A + A+DVWS G++L+ ++S G P+W + + AV
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 106/218 (48%), Gaps = 16/218 (7%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
Q++G GQFG++ + + A K+I + + E E E+M +LS HP +V
Sbjct: 14 QEIGSGQFGLVHL-GYWLNKDKVAIKTIREGAM----SEEDFIEEAEVMMKLS-HPKLVQ 67
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLE-KFGRFSEAEARVLFMQLMQVVLYCHEIGVVH 165
L V ++ + LV E G L L + G F+ + + + + + Y E V+H
Sbjct: 68 LYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIH 127
Query: 166 RDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPEVLA-GGYN 221
RDL N L+ + IK++DFG+ ++ Q T G+ F + +PEV + Y+
Sbjct: 128 RDLAARNCLVG---ENQVIKVSDFGMTRFVLDDQYTSST-GTKFPVKWASPEVFSFSRYS 183
Query: 222 QAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTA 258
+DVWS GV+++ + S G P+ + S + + + T
Sbjct: 184 SKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG 221
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 23/235 (9%)
Query: 31 LDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL---VTIDDERS 87
LD IS + + +G G+FG VCS + S+A L T R
Sbjct: 30 LDATNIS-------IDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD 80
Query: 88 VKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARV 146
E IM + HPN++ L+ V V +V E G L L K +F+ +
Sbjct: 81 FLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 139
Query: 147 LFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPG-QSLLGTV 205
+ + + Y ++G VHRDL NIL+ S+ K++DFGL+ +E ++ T
Sbjct: 140 MLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTR 196
Query: 206 GSPF---YIAPEVLA-GGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAV 255
G + +PE +A + A+DVWS G++L+ ++S G P+W + + AV
Sbjct: 197 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 251
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 115/264 (43%), Gaps = 44/264 (16%)
Query: 86 RSVKLEIEIMTRLSGHPNVVDLKAVYE--DEDYVH---LVMELCAG--GELFHRLEKFGR 138
+ V EI ++ HPN++ L+ ++ +E +H LV EL ++ H ++
Sbjct: 74 KRVLREIRLLNHFH-HPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH--DQRIV 130
Query: 139 FSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPG 198
S + ++ + HE GVVHRDL P NILL A ++ I + DF LA
Sbjct: 131 ISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILL---ADNNDITICDFNLAREDTAD 187
Query: 199 QSLLGTVGSPFYIAPEVLA--GGYNQAADVWSAGVILYILLSGMPPFWG----NTKSRIF 252
+ V +Y APE++ G+ + D+WSAG ++ + + F G N ++I
Sbjct: 188 ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV 247
Query: 253 DAVRTADL--------------------RFPSNPWDHISDSAK----DLVMGMLSTDPSQ 288
+ V T + P+ W + +A DL+ ML +P +
Sbjct: 248 EVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQR 307
Query: 289 RLTARQVLDHSWMGDGIQDPEKLS 312
R++ Q L H + + + DP L+
Sbjct: 308 RISTEQALRHPYF-ESLFDPLDLT 330
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 23/235 (9%)
Query: 31 LDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL---VTIDDERS 87
LD IS + + +G G+FG VCS + S+A L T R
Sbjct: 42 LDATNIS-------IDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD 92
Query: 88 VKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARV 146
E IM + HPN++ L+ V V +V E G L L K +F+ +
Sbjct: 93 FLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 151
Query: 147 LFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPG-QSLLGTV 205
+ + + Y ++G VHRDL NIL+ S+ K++DFGL+ +E ++ T
Sbjct: 152 MLRGIASGMKYLSDMGFVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 206 GSPF---YIAPEVLA-GGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAV 255
G + +PE +A + A+DVWS G++L+ ++S G P+W + + AV
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 119/259 (45%), Gaps = 21/259 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
RE L +LG G FG + + + T V A K++ T+ E ++ E ++M +L
Sbjct: 7 RESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPG---TMSPEAFLQ-EAQVMKKLR 61
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-KFGRFSEAEARV-LFMQLMQVVLY 157
H +V L AV +E + +V E + G L L+ + G++ V + Q+ + Y
Sbjct: 62 -HEKLVQLYAVVSEEP-IXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 119
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ VHRDL+ NIL+ K+ADFGLA IE + G+ F + APE
Sbjct: 120 VERMNYVHRDLRAANILVGENLVC---KVADFGLARLIEDNEX-TARQGAKFPIKWTAPE 175
Query: 215 -VLAGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
L G + +DVWS G++L L + G P+ G + D V R P P +
Sbjct: 176 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPP--ECPE 232
Query: 273 SAKDLVMGMLSTDPSQRLT 291
S DL+ +P +R T
Sbjct: 233 SLHDLMCQCWRKEPEERPT 251
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 23/235 (9%)
Query: 31 LDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL---VTIDDERS 87
LD IS + + +G G+FG VCS + S+A L T R
Sbjct: 42 LDATNIS-------IDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD 92
Query: 88 VKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARV 146
E IM + HPN++ L+ V V +V E G L L K +F+ +
Sbjct: 93 FLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 151
Query: 147 LFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPG-QSLLGTV 205
+ + + Y ++G VHRDL NIL+ S+ K++DFGL+ +E ++ T
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 206 GSPF---YIAPEVLA-GGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAV 255
G + +PE +A + A+DVWS G++L+ ++S G P+W + + AV
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 23/235 (9%)
Query: 31 LDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL---VTIDDERS 87
LD IS + + +G G+FG VCS + S+A L T R
Sbjct: 42 LDATNIS-------IDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD 92
Query: 88 VKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARV 146
E IM + HPN++ L+ V V +V E G L L K +F+ +
Sbjct: 93 FLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 151
Query: 147 LFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPG-QSLLGTV 205
+ + + Y ++G VHRDL NIL+ S+ K++DFGL+ +E ++ T
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 206 GSPF---YIAPEVLA-GGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAV 255
G + +PE +A + A+DVWS G++L+ ++S G P+W + + AV
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 119/259 (45%), Gaps = 21/259 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
RE L +LG G FG + + + T V A K++ T+ E ++ E ++M +L
Sbjct: 14 RESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPG---TMSPEAFLQ-EAQVMKKLR 68
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-KFGRFSEAEARV-LFMQLMQVVLY 157
H +V L AV +E +++V E G L L+ + G++ V + Q+ + Y
Sbjct: 69 -HEKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAY 126
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ VHRDL+ NIL+ K+ADFGLA IE + G+ F + APE
Sbjct: 127 VERMNYVHRDLRAANILVGENLVC---KVADFGLARLIEDNE-YTARQGAKFPIKWTAPE 182
Query: 215 -VLAGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
L G + +DVWS G++L L + G P+ G + D V R P P +
Sbjct: 183 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPP--ECPE 239
Query: 273 SAKDLVMGMLSTDPSQRLT 291
S DL+ +P +R T
Sbjct: 240 SLHDLMCQCWRKEPEERPT 258
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 119/259 (45%), Gaps = 21/259 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
RE L +LG G FG + + + T V A K++ T+ E ++ E ++M +L
Sbjct: 14 RESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLKPG---TMSPEAFLQ-EAQVMKKLR 68
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-KFGRFSEAEARV-LFMQLMQVVLY 157
H +V L AV +E +++V E G L L+ + G++ V + Q+ + Y
Sbjct: 69 -HEKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAY 126
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ VHRDL+ NIL+ K+ADFGLA IE + G+ F + APE
Sbjct: 127 VERMNYVHRDLRAANILVGENLVC---KVADFGLARLIEDNE-WTARQGAKFPIKWTAPE 182
Query: 215 -VLAGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
L G + +DVWS G++L L + G P+ G + D V R P P +
Sbjct: 183 AALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMPCPP--ECPE 239
Query: 273 SAKDLVMGMLSTDPSQRLT 291
S DL+ +P +R T
Sbjct: 240 SLHDLMCQCWRKEPEERPT 258
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 115/264 (43%), Gaps = 44/264 (16%)
Query: 86 RSVKLEIEIMTRLSGHPNVVDLKAVYE--DEDYVH---LVMELCAG--GELFHRLEKFGR 138
+ V EI ++ HPN++ L+ ++ +E +H LV EL ++ H ++
Sbjct: 74 KRVLREIRLLNHFH-HPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIH--DQRIV 130
Query: 139 FSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPG 198
S + ++ + HE GVVHRDL P NILL A ++ I + DF LA
Sbjct: 131 ISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILL---ADNNDITICDFNLAREDTAD 187
Query: 199 QSLLGTVGSPFYIAPEVLA--GGYNQAADVWSAGVILYILLSGMPPFWG----NTKSRIF 252
+ V +Y APE++ G+ + D+WSAG ++ + + F G N ++I
Sbjct: 188 ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV 247
Query: 253 DAVRTADL--------------------RFPSNPWDHISDSAK----DLVMGMLSTDPSQ 288
+ V T + P+ W + +A DL+ ML +P +
Sbjct: 248 EVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQR 307
Query: 289 RLTARQVLDHSWMGDGIQDPEKLS 312
R++ Q L H + + + DP L+
Sbjct: 308 RISTEQALRHPYF-ESLFDPLDLT 330
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 94/203 (46%), Gaps = 18/203 (8%)
Query: 47 QQLGWGQFGVIRV-CSDKF---TGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHP 102
+ LG G FG + + C D TGE+ A K++ D K EI+I+ L H
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD--CGPQHRSGWKQEIDILRTLY-HE 76
Query: 103 NVVDLKAVYED--EDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
+++ K ED E + LVME G L L + A+ + Q+ + + Y H
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYLHS 135
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTV---GSP-FYIAPEVL 216
+HR+L N+LL + +K+ DFGLA + G SP F+ APE L
Sbjct: 136 QHYIHRNLAARNVLLD---NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 192
Query: 217 AG-GYNQAADVWSAGVILYILLS 238
+ A+DVWS GV LY LL+
Sbjct: 193 KEYKFYYASDVWSFGVTLYELLT 215
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 116/264 (43%), Gaps = 19/264 (7%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDL 107
+LG G +GV+ +G++ A K I V +++ + ++++I R P V
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRA--TVNSQEQKRLLMDLDISMRTVDCPFTVTF 115
Query: 108 KAVYEDEDYVHLVMELCAGG-ELFHR--LEKFGRFSEAEARVLFMQLMQVVLYCH-EIGV 163
E V + MEL + F++ ++K E + + +++ + + H ++ V
Sbjct: 116 YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 175
Query: 164 VHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVL-----AG 218
+HRD+KP N+L+ +K+ DFG++ Y+ + G Y+APE +
Sbjct: 176 IHRDVKPSNVLINALGQ---VKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQK 232
Query: 219 GYNQAADVWSAGVILYILLSGMPPF--WGNTKSRIFDAVRTADLRFPSNPWDHISDSAKD 276
GY+ +D+WS G+ + L P+ WG ++ V P P D S D
Sbjct: 233 GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS---PQLPADKFSAEFVD 289
Query: 277 LVMGMLSTDPSQRLTARQVLDHSW 300
L + +R T +++ H +
Sbjct: 290 FTSQCLKKNSKERPTYPELMQHPF 313
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 23/235 (9%)
Query: 31 LDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL---VTIDDERS 87
LD IS + + +G G+FG VCS + S+A L T R
Sbjct: 42 LDATNIS-------IDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD 92
Query: 88 VKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARV 146
E IM + HPN++ L+ V V +V E G L L K +F+ +
Sbjct: 93 FLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 151
Query: 147 LFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPG-QSLLGTV 205
+ + + Y ++G VHRDL NIL+ S+ K++DFGL+ +E ++ T
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 206 GSPF---YIAPEVLA-GGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAV 255
G + +PE +A + A+DVWS G++L+ ++S G P+W + + AV
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 23/235 (9%)
Query: 31 LDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL---VTIDDERS 87
LD IS + + +G G+FG VCS + S+A L T R
Sbjct: 42 LDATNIS-------IDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD 92
Query: 88 VKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARV 146
E IM + HPN++ L+ V V +V E G L L K +F+ +
Sbjct: 93 FLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVG 151
Query: 147 LFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPG-QSLLGTV 205
+ + + Y ++G VHRDL NIL+ S+ K++DFGL+ +E ++ T
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTR 208
Query: 206 GSPF---YIAPEVLA-GGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAV 255
G + +PE +A + A+DVWS G++L+ ++S G P+W + + AV
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 107/235 (45%), Gaps = 23/235 (9%)
Query: 31 LDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL---VTIDDERS 87
LD IS + + +G G+FG VCS + S+A L T R
Sbjct: 40 LDATNIS-------IDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD 90
Query: 88 VKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARV 146
E IM + HPN++ L+ V V +V E G L L K +F+ +
Sbjct: 91 FLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 149
Query: 147 LFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPG-QSLLGTV 205
+ + + Y ++G VHRDL NIL+ S+ K++DFGL+ +E ++ T
Sbjct: 150 MLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLSRVLEDDPEAAYTTR 206
Query: 206 GSPF---YIAPEVLA-GGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAV 255
G + +PE +A + A+DVWS G++L+ ++S G P+W + + AV
Sbjct: 207 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 261
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 109/228 (47%), Gaps = 27/228 (11%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
RE L ++LG GQFG + + + +V A K++ + ++ E +M L
Sbjct: 11 RESIKLVKKLGAGQFGEVWMGYYNNSTKV-AVKTLKPGTMSV----QAFLEEANLMKTLQ 65
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLF-------MQLM 152
H +V L AV E+ ++++ E A G L L+ S+ +VL Q+
Sbjct: 66 -HDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLK-----SDEGGKVLLPKLIDFSAQIA 119
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF--- 209
+ + Y +HRDL+ N+L+ + S K+ADFGLA IE + G+ F
Sbjct: 120 EGMAYIERKNYIHRDLRAANVLV---SESLMCKIADFGLARVIEDNE-YTAREGAKFPIK 175
Query: 210 YIAPEVLA-GGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIFDAV 255
+ APE + G + ++VWS G++LY I+ G P+ G T + + A+
Sbjct: 176 WTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSAL 223
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 106/235 (45%), Gaps = 23/235 (9%)
Query: 31 LDTNQISNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL---VTIDDERS 87
LD IS + + +G G+FG VCS + S+A L T R
Sbjct: 42 LDATNIS-------IDKVVGAGEFG--EVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRD 92
Query: 88 VKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARV 146
E IM + HPN++ L+ V V +V E G L L K +F+ +
Sbjct: 93 FLGEASIMGQFD-HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVG 151
Query: 147 LFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPG-QSLLGTV 205
+ + + Y ++G VHRDL NIL+ S+ K++DFGL +E ++ T
Sbjct: 152 MLRGIASGMKYLSDMGYVHRDLAARNILI---NSNLVCKVSDFGLGRVLEDDPEAAYTTR 208
Query: 206 GSPF---YIAPEVLA-GGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAV 255
G + +PE +A + A+DVWS G++L+ ++S G P+W + + AV
Sbjct: 209 GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 94/203 (46%), Gaps = 18/203 (8%)
Query: 47 QQLGWGQFGVIRV-CSDKF---TGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHP 102
+ LG G FG + + C D TGE+ A K++ D K EI+I+ L H
Sbjct: 20 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD--CGPQHRSGWKQEIDILRTLY-HE 76
Query: 103 NVVDLKAVYED--EDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHE 160
+++ K ED E + LVME G L L + A+ + Q+ + + Y H
Sbjct: 77 HIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-IGLAQLLLFAQQICEGMAYLHA 135
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTV---GSP-FYIAPEVL 216
+HR+L N+LL + +K+ DFGLA + G SP F+ APE L
Sbjct: 136 QHYIHRNLAARNVLLD---NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECL 192
Query: 217 AG-GYNQAADVWSAGVILYILLS 238
+ A+DVWS GV LY LL+
Sbjct: 193 KEYKFYYASDVWSFGVTLYELLT 215
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 125/304 (41%), Gaps = 64/304 (21%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDER-----SVKLEIEIMTRLSGHP 102
++G G FG + + TG+ A K V +++E+ + EI+I+ +L H
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKK------VLMENEKEGFPITALREIKIL-QLLKHE 77
Query: 103 NVVDLKAVYEDE--------DYVHLVMELCA---GGELFHRLEKFGRFSEAEARVLFMQL 151
NVV+L + + ++LV + C G L + L KF + +E + + L
Sbjct: 78 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKF---TLSEIKRVMQML 134
Query: 152 MQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQS-----LLGTVG 206
+ + Y H ++HRD+K N+L+ +KLADFGLA ++ V
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDGV---LKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 207 SPFYIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPS 264
+ +Y PE+L G Y D+W AG I+ + + P GNT+ +
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP 251
Query: 265 NPWDHISD----------------------------SAKDLVMGMLSTDPSQRLTARQVL 296
W ++ + A DL+ +L DP+QR+ + L
Sbjct: 252 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDAL 311
Query: 297 DHSW 300
+H +
Sbjct: 312 NHDF 315
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 104/215 (48%), Gaps = 19/215 (8%)
Query: 37 SNLRERFVLG-QQLGWGQFGVIRVC----SDKFTGEVFACKSIAKDRLVTIDDERSVKLE 91
++ +RF+ + LG G FG + +C TGE A KS+ + + +K E
Sbjct: 16 THFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKE 73
Query: 92 IEIMTRLSGHPNVVDLKAVYEDE--DYVHLVMELCAGGELFHRLEKFGRFSEAEARVLF- 148
IEI+ L H N+V K + ++ + + L+ME G L L K + ++ +
Sbjct: 74 IEILRNLY-HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYA 132
Query: 149 MQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQ---SLLGTV 205
+Q+ + + Y VHRDL N+L+ S +K+ DFGL IE + ++
Sbjct: 133 VQICKGMDYLGSRQYVHRDLAARNVLVE---SEHQVKIGDFGLTKAIETDKEXXTVKDDR 189
Query: 206 GSP-FYIAPEVLA-GGYNQAADVWSAGVILYILLS 238
SP F+ APE L + A+DVWS GV L+ LL+
Sbjct: 190 DSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 124/288 (43%), Gaps = 47/288 (16%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTI---DDERSVKLEIEIMT 96
R G+ LG G FG + + G+ A +A L + D++ ++ E++IM+
Sbjct: 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 97 RLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRF-----------SEAEAR 145
L H N+V+L V ++ E C G+L + L + R S A R
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTR 164
Query: 146 VLFM---QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-------TYI 195
L Q+ Q + + +HRD+ N+LL + K+ DFGLA YI
Sbjct: 165 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA---KIGDFGLARDIMNDSNYI 221
Query: 196 EPGQSLLGTVGSPFYIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWG---NTK-- 248
G + L ++APE + Y +DVWS G++L+ + S G+ P+ G N+K
Sbjct: 222 VKGNARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY 277
Query: 249 SRIFDAVRTADLRF-PSNPWDHISDSAKDLVMGMLSTDPSQRLTARQV 295
+ D + A F P N + ++ + +P+ R T +Q+
Sbjct: 278 KLVKDGYQMAQPAFAPKNIY--------SIMQACWALEPTHRPTFQQI 317
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 11/199 (5%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDL 107
+LG G GV+ S K +G V A K I + I ++ + E++++ + P +V
Sbjct: 40 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ--IIRELQVLHECNS-PYIVGF 96
Query: 108 KAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEI-GVVHR 166
+ + + + ME GG L L+K GR E + + +++ + Y E ++HR
Sbjct: 97 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 156
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT-VGSPFYIAPEVLAG-GYNQAA 224
D+KP NIL+ ++ IKL DFG++ + S+ + VG+ Y++PE L G Y+ +
Sbjct: 157 DVKPSNILVNSRGE---IKLCDFGVSGQLI--DSMANSFVGTRSYMSPERLQGTHYSVQS 211
Query: 225 DVWSAGVILYILLSGMPPF 243
D+WS G+ L + G P
Sbjct: 212 DIWSMGLSLVEMAVGRYPI 230
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 11/199 (5%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDL 107
+LG G GV+ S K +G V A K I + I ++ + E++++ + P +V
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ--IIRELQVLHECNS-PYIVGF 69
Query: 108 KAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEI-GVVHR 166
+ + + + ME GG L L+K GR E + + +++ + Y E ++HR
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT-VGSPFYIAPEVLAG-GYNQAA 224
D+KP NIL+ ++ IKL DFG++ + S+ + VG+ Y++PE L G Y+ +
Sbjct: 130 DVKPSNILVNSRGE---IKLCDFGVSGQLI--DSMANSFVGTRSYMSPERLQGTHYSVQS 184
Query: 225 DVWSAGVILYILLSGMPPF 243
D+WS G+ L + G P
Sbjct: 185 DIWSMGLSLVEMAVGRYPI 203
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 11/199 (5%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDL 107
+LG G GV+ S K +G V A K I + I ++ + E++++ + P +V
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ--IIRELQVLHECNS-PYIVGF 69
Query: 108 KAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEI-GVVHR 166
+ + + + ME GG L L+K GR E + + +++ + Y E ++HR
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT-VGSPFYIAPEVLAG-GYNQAA 224
D+KP NIL+ ++ IKL DFG++ + S+ + VG+ Y++PE L G Y+ +
Sbjct: 130 DVKPSNILVNSRGE---IKLCDFGVSGQLI--DSMANSFVGTRSYMSPERLQGTHYSVQS 184
Query: 225 DVWSAGVILYILLSGMPPF 243
D+WS G+ L + G P
Sbjct: 185 DIWSMGLSLVEMAVGRYPI 203
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 104/215 (48%), Gaps = 19/215 (8%)
Query: 37 SNLRERFVLG-QQLGWGQFGVIRVC----SDKFTGEVFACKSIAKDRLVTIDDERSVKLE 91
++ +RF+ + LG G FG + +C TGE A KS+ + + +K E
Sbjct: 4 THFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKE 61
Query: 92 IEIMTRLSGHPNVVDLKAVYEDE--DYVHLVMELCAGGELFHRLEKFGRFSEAEARVLF- 148
IEI+ L H N+V K + ++ + + L+ME G L L K + ++ +
Sbjct: 62 IEILRNLY-HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYA 120
Query: 149 MQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQ---SLLGTV 205
+Q+ + + Y VHRDL N+L+ S +K+ DFGL IE + ++
Sbjct: 121 VQICKGMDYLGSRQYVHRDLAARNVLVE---SEHQVKIGDFGLTKAIETDKEXXTVKDDR 177
Query: 206 GSP-FYIAPEVLA-GGYNQAADVWSAGVILYILLS 238
SP F+ APE L + A+DVWS GV L+ LL+
Sbjct: 178 DSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 212
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 111/270 (41%), Gaps = 32/270 (11%)
Query: 49 LGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDLK 108
+G G FG + K G + DD R E+E++ +L HPN+++L
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 89
Query: 109 AVYEDEDYVHLVMELCAGGELFHRLEK---------FGRFSEAEARVLFMQLMQVVL--- 156
E Y++L +E G L L K F + + + QL+
Sbjct: 90 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 149
Query: 157 ----YCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA----TYIEPGQSLLGTVGSP 208
Y + +HR+L NIL+ + K+ADFGL+ Y+ + +G +
Sbjct: 150 RGMDYLSQKQFIHRNLAARNILVGENYVA---KIADFGLSRGQEVYV---KKTMGRLPVR 203
Query: 209 FYIAPEVLAGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAV-RTADLRFPSNP 266
+ + Y +DVWS GV+L+ ++S G P+ G T + +++ + + L P N
Sbjct: 204 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLN- 262
Query: 267 WDHISDSAKDLVMGMLSTDPSQRLTARQVL 296
D DL+ P +R + Q+L
Sbjct: 263 ---CDDEVYDLMRQCWREKPYERPSFAQIL 289
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 125/304 (41%), Gaps = 64/304 (21%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDER-----SVKLEIEIMTRLSGHP 102
++G G FG + + TG+ A K V +++E+ + EI+I+ +L H
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKK------VLMENEKEGFPITALREIKIL-QLLKHE 77
Query: 103 NVVDLKAVYEDE--------DYVHLVMELCA---GGELFHRLEKFGRFSEAEARVLFMQL 151
NVV+L + + ++LV + C G L + L KF + +E + + L
Sbjct: 78 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKF---TLSEIKRVMQML 134
Query: 152 MQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQS-----LLGTVG 206
+ + Y H ++HRD+K N+L+ +KLADFGLA ++ V
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDGV---LKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 207 SPFYIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPS 264
+ +Y PE+L G Y D+W AG I+ + + P GNT+ +
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP 251
Query: 265 NPWDHISD----------------------------SAKDLVMGMLSTDPSQRLTARQVL 296
W ++ + A DL+ +L DP+QR+ + L
Sbjct: 252 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDAL 311
Query: 297 DHSW 300
+H +
Sbjct: 312 NHDF 315
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 125/304 (41%), Gaps = 64/304 (21%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDER-----SVKLEIEIMTRLSGHP 102
++G G FG + + TG+ A K V +++E+ + EI+I+ +L H
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKK------VLMENEKEGFPITALREIKIL-QLLKHE 77
Query: 103 NVVDLKAVYEDEDY--------VHLVMELCA---GGELFHRLEKFGRFSEAEARVLFMQL 151
NVV+L + + ++LV + C G L + L KF + +E + + L
Sbjct: 78 NVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKF---TLSEIKRVMQML 134
Query: 152 MQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQS-----LLGTVG 206
+ + Y H ++HRD+K N+L+ +KLADFGLA ++ V
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDGV---LKLADFGLARAFSLAKNSQPNRYXNRVV 191
Query: 207 SPFYIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPS 264
+ +Y PE+L G Y D+W AG I+ + + P GNT+ +
Sbjct: 192 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP 251
Query: 265 NPWDHISD----------------------------SAKDLVMGMLSTDPSQRLTARQVL 296
W ++ + A DL+ +L DP+QR+ + L
Sbjct: 252 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDAL 311
Query: 297 DHSW 300
+H +
Sbjct: 312 NHDF 315
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 99/198 (50%), Gaps = 9/198 (4%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDL 107
+LG G GV+ S K +G V A K I + I ++ + E++++ + P +V
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ--IIRELQVLHECNS-PYIVGF 69
Query: 108 KAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEI-GVVHR 166
+ + + + ME GG L L+K GR E + + +++ + Y E ++HR
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAG-GYNQAAD 225
D+KP NIL+ ++ IKL DFG++ + + VG+ Y++PE L G Y+ +D
Sbjct: 130 DVKPSNILVNSRGE---IKLCDFGVSGQLIDSMA-NSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 226 VWSAGVILYILLSGMPPF 243
+WS G+ L + G P
Sbjct: 186 IWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 99/198 (50%), Gaps = 9/198 (4%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDL 107
+LG G GV+ S K +G V A K I + I ++ + E++++ + P +V
Sbjct: 13 ELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ--IIRELQVLHECNS-PYIVGF 69
Query: 108 KAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEI-GVVHR 166
+ + + + ME GG L L+K GR E + + +++ + Y E ++HR
Sbjct: 70 YGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHR 129
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVLAG-GYNQAAD 225
D+KP NIL+ ++ IKL DFG++ + + VG+ Y++PE L G Y+ +D
Sbjct: 130 DVKPSNILVNSRGE---IKLCDFGVSGQLIDSMA-NSFVGTRSYMSPERLQGTHYSVQSD 185
Query: 226 VWSAGVILYILLSGMPPF 243
+WS G+ L + G P
Sbjct: 186 IWSMGLSLVEMAVGRYPI 203
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 95/205 (46%), Gaps = 22/205 (10%)
Query: 47 QQLGWGQFGVIRV-CSDKF---TGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHP 102
+ LG G FG + + C D TGE+ A K++ D K EI+I+ L H
Sbjct: 37 RDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD--AGPQHRSGWKQEIDILRTLY-HE 93
Query: 103 NVVDLKAVYEDEDY--VHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVLYC 158
+++ K ED + LVME G L L R S A++L Q+ + + Y
Sbjct: 94 HIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLP---RHSIGLAQLLLFAQQICEGMAYL 150
Query: 159 HEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTV---GSP-FYIAPE 214
H +HRDL N+LL + +K+ DFGLA + G SP F+ APE
Sbjct: 151 HAQHYIHRDLAARNVLL---DNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPE 207
Query: 215 VLAG-GYNQAADVWSAGVILYILLS 238
L + A+DVWS GV LY LL+
Sbjct: 208 CLKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 125/304 (41%), Gaps = 64/304 (21%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDER-----SVKLEIEIMTRLSGHP 102
++G G FG + + TG+ A K V +++E+ + EI+I+ +L H
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKK------VLMENEKEGFPITALREIKIL-QLLKHE 76
Query: 103 NVVDLKAVYEDE--------DYVHLVMELCA---GGELFHRLEKFGRFSEAEARVLFMQL 151
NVV+L + + ++LV + C G L + L KF + +E + + L
Sbjct: 77 NVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKF---TLSEIKRVMQML 133
Query: 152 MQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQS-----LLGTVG 206
+ + Y H ++HRD+K N+L+ +KLADFGLA ++ V
Sbjct: 134 LNGLYYIHRNKILHRDMKAANVLITRDGV---LKLADFGLARAFSLAKNSQPNRYXNRVV 190
Query: 207 SPFYIAPEVLAG--GYNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTADLRFPS 264
+ +Y PE+L G Y D+W AG I+ + + P GNT+ +
Sbjct: 191 TLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP 250
Query: 265 NPWDHISD----------------------------SAKDLVMGMLSTDPSQRLTARQVL 296
W ++ + A DL+ +L DP+QR+ + L
Sbjct: 251 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDAL 310
Query: 297 DHSW 300
+H +
Sbjct: 311 NHDF 314
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 124/288 (43%), Gaps = 47/288 (16%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTI---DDERSVKLEIEIMT 96
R G+ LG G FG + + G+ A +A L + D++ ++ E++IM+
Sbjct: 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 97 RLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAE-----------AR 145
L H N+V+L V ++ E C G+L + L + R E + R
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTR 164
Query: 146 VLFM---QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-------TYI 195
L Q+ Q + + +HRD+ N+LL + K+ DFGLA YI
Sbjct: 165 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA---KIGDFGLARDIMNDSNYI 221
Query: 196 EPGQSLLGTVGSPFYIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWG---NTK-- 248
G + L ++APE + Y +DVWS G++L+ + S G+ P+ G N+K
Sbjct: 222 VKGNARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY 277
Query: 249 SRIFDAVRTADLRF-PSNPWDHISDSAKDLVMGMLSTDPSQRLTARQV 295
+ D + A F P N + ++ + +P+ R T +Q+
Sbjct: 278 KLVKDGYQMAQPAFAPKNIY--------SIMQACWALEPTHRPTFQQI 317
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 122/265 (46%), Gaps = 33/265 (12%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
RE L ++LG GQFG + + + +V A K++ T+ E ++ E +IM +L
Sbjct: 8 RESLQLIKRLGNGQFGEVWMGTWNGNTKV-AIKTLKPG---TMSPESFLE-EAQIMKKLK 62
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--------QL 151
H +V L AV +E +++V E G L L+ + E R L + Q+
Sbjct: 63 -HDKLVQLYAVVSEEP-IYIVTEYMNKGSLLDFLK------DGEGRALKLPNLVDMAAQV 114
Query: 152 MQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF-- 209
+ Y + +HRDL+ NIL+ K+ADFGLA IE + G+ F
Sbjct: 115 AAGMAYIERMNYIHRDLRSANILVGNGLIC---KIADFGLARLIEDNEX-TARQGAKFPI 170
Query: 210 -YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFPSNP 266
+ APE L G + +DVWS G++L L++ G P+ G + + V R P P
Sbjct: 171 KWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG-YRMPC-P 228
Query: 267 WDHISDSAKDLVMGMLSTDPSQRLT 291
D S +L++ DP +R T
Sbjct: 229 QD-CPISLHELMIHCWKKDPEERPT 252
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 116/264 (43%), Gaps = 19/264 (7%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDL 107
+LG G +GV+ +G++ A K I V +++ + ++++I R P V
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRA--TVNSQEQKRLLMDLDISMRTVDCPFTVTF 71
Query: 108 KAVYEDEDYVHLVMELCAGG-ELFHR--LEKFGRFSEAEARVLFMQLMQVVLYCH-EIGV 163
E V + MEL + F++ ++K E + + +++ + + H ++ V
Sbjct: 72 YGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 131
Query: 164 VHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPFYIAPEVL-----AG 218
+HRD+KP N+L+ +K+ DFG++ Y+ + G Y+APE +
Sbjct: 132 IHRDVKPSNVLINALGQ---VKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQK 188
Query: 219 GYNQAADVWSAGVILYILLSGMPPF--WGNTKSRIFDAVRTADLRFPSNPWDHISDSAKD 276
GY+ +D+WS G+ + L P+ WG ++ V P P D S D
Sbjct: 189 GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS---PQLPADKFSAEFVD 245
Query: 277 LVMGMLSTDPSQRLTARQVLDHSW 300
L + +R T +++ H +
Sbjct: 246 FTSQCLKKNSKERPTYPELMQHPF 269
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 124/284 (43%), Gaps = 43/284 (15%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTI---DDERSVKLEIEIMT 96
R G+ LG G FG + + G+ A +A L + D++ ++ E++IM+
Sbjct: 37 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 96
Query: 97 RLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF---------GRFSEAEARVL 147
L H N+V+L V ++ E C G+L + L + GR E +
Sbjct: 97 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLH 156
Query: 148 F-MQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-------TYIEPGQ 199
F Q+ Q + + +HRD+ N+LL + K+ DFGLA YI G
Sbjct: 157 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA---KIGDFGLARDIMNDSNYIVKGN 213
Query: 200 SLLGTVGSPFYIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWG---NTK--SRIF 252
+ L ++APE + Y +DVWS G++L+ + S G+ P+ G N+K +
Sbjct: 214 ARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 269
Query: 253 DAVRTADLRF-PSNPWDHISDSAKDLVMGMLSTDPSQRLTARQV 295
D + A F P N + ++ + +P+ R T +Q+
Sbjct: 270 DGYQMAQPAFAPKNIY--------SIMQACWALEPTHRPTFQQI 305
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 124/284 (43%), Gaps = 43/284 (15%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTI---DDERSVKLEIEIMT 96
R G+ LG G FG + + G+ A +A L + D++ ++ E++IM+
Sbjct: 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 97 RLSGHPNVVDLKAVYEDEDYVHLVMELCAGGEL--FHRLEKFGRFSEAEARVLFM----- 149
L H N+V+L V ++ E C G+L F R + + + R L +
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLH 164
Query: 150 ---QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-------TYIEPGQ 199
Q+ Q + + +HRD+ N+LL + K+ DFGLA YI G
Sbjct: 165 FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA---KIGDFGLARDIMNDSNYIVKGN 221
Query: 200 SLLGTVGSPFYIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWG---NTK--SRIF 252
+ L ++APE + Y +DVWS G++L+ + S G+ P+ G N+K +
Sbjct: 222 ARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 277
Query: 253 DAVRTADLRF-PSNPWDHISDSAKDLVMGMLSTDPSQRLTARQV 295
D + A F P N + ++ + +P+ R T +Q+
Sbjct: 278 DGYQMAQPAFAPKNIY--------SIMQACWALEPTHRPTFQQI 313
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 121/288 (42%), Gaps = 40/288 (13%)
Query: 40 RERFVLGQQLGWGQFG------VIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIE 93
R++ LG+ LG G FG + + DK V + KD T +D + E+E
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEEDLSDLVSEME 92
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-----------KFGRFSEA 142
+M + H N+++L + +++++E + G L L R E
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 143 EARVLFM-----QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEP 197
+ + QL + + Y +HRDL N+L+ ++ +K+ADFGLA I
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINN 209
Query: 198 GQSLLGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIF 252
T ++APE L Y +DVWS GV+++ I G P+ G +F
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
Query: 253 DAVRTADLRFPSNPWDHISDSAKDLVMGM---LSTDPSQRLTARQVLD 297
++ + D ++ +L M M PSQR T +Q+++
Sbjct: 270 KLLKEG------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 120/288 (41%), Gaps = 40/288 (13%)
Query: 40 RERFVLGQQLGWGQFG------VIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIE 93
R++ LG+ LG G FG + + DK V + KD T D + E+E
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEME 92
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-----------KFGRFSEA 142
+M + H N+++L + +++++E + G L L R E
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 143 EARVLFM-----QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEP 197
+ + QL + + Y +HRDL N+L+ ++ +K+ADFGLA I
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINN 209
Query: 198 GQSLLGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIF 252
T ++APE L Y +DVWS GV+++ I G P+ G +F
Sbjct: 210 IDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
Query: 253 DAVRTADLRFPSNPWDHISDSAKDLVMGM---LSTDPSQRLTARQVLD 297
++ + D ++ +L M M PSQR T +Q+++
Sbjct: 270 KLLKEG------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 105/230 (45%), Gaps = 36/230 (15%)
Query: 39 LRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRL 98
L F++ +++G G FG + +C + +A K + + T RS K+E +I+ ++
Sbjct: 33 LNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYT----RSAKIEADILKKI 88
Query: 99 SGHPNVVDLKAVYEDE----DYVHLVMELCAGGELFHRLEK--FGRFSEAEARVLFMQLM 152
+ Y + D++ L+ E G L+ + + + F + ++ ++++
Sbjct: 89 QNDDINNNNIVKYHGKFMYYDHMCLIFE-PLGPSLYEIITRNNYNGFHIEDIKLYCIEIL 147
Query: 153 QVVLYCHEIGVVHRDLKPENILL----------------------ATKASSSPIKLADFG 190
+ + Y ++ + H DLKPENILL + S+ IKL DFG
Sbjct: 148 KALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFG 207
Query: 191 LATYIEPGQSLLGTVGSPFYIAPEVLAG-GYNQAADVWSAGVILYILLSG 239
AT+ + + Y APEV+ G++ ++D+WS G +L L +G
Sbjct: 208 CATFKSDYHG--SIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTG 255
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 120/288 (41%), Gaps = 40/288 (13%)
Query: 40 RERFVLGQQLGWGQFG------VIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIE 93
R++ LG+ LG G FG + + DK V + KD T D + E+E
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEME 92
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-----------KFGRFSEA 142
+M + H N+++L + +++++E + G L L R E
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEE 152
Query: 143 EARVLFM-----QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEP 197
+ + QL + + Y +HRDL N+L+ ++ +K+ADFGLA I
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINN 209
Query: 198 GQSLLGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIF 252
T ++APE L Y +DVWS GV+++ I G P+ G +F
Sbjct: 210 IDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
Query: 253 DAVRTADLRFPSNPWDHISDSAKDLVMGM---LSTDPSQRLTARQVLD 297
++ + D ++ +L M M PSQR T +Q+++
Sbjct: 270 KLLKEG------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 120/288 (41%), Gaps = 40/288 (13%)
Query: 40 RERFVLGQQLGWGQFG------VIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIE 93
R++ LG+ LG G FG + + DK V + KD T D + E+E
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEME 92
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-----------KFGRFSEA 142
+M + H N+++L + +++++E + G L L R E
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 143 EARVLFM-----QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEP 197
+ + QL + + Y +HRDL N+L+ ++ +K+ADFGLA I
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINN 209
Query: 198 GQSLLGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIF 252
T ++APE L Y +DVWS GV+++ I G P+ G +F
Sbjct: 210 IDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
Query: 253 DAVRTADLRFPSNPWDHISDSAKDLVMGM---LSTDPSQRLTARQVLD 297
++ + D ++ +L M M PSQR T +Q+++
Sbjct: 270 KLLKEG------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 122/289 (42%), Gaps = 42/289 (14%)
Query: 40 RERFVLGQQLGWGQFG------VIRVCSDKFTGEV-FACKSIAKDRLVTIDDERSVKLEI 92
R+R VLG+ LG G FG I + DK A K + D T D + E+
Sbjct: 27 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEM 84
Query: 93 EIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-------KFG-------- 137
E+M + H N+++L + +++++E + G L L+ +F
Sbjct: 85 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPE 144
Query: 138 -RFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIE 196
+ S + Q+ + + Y +HRDL N+L+ + +K+ADFGLA I
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIH 201
Query: 197 PGQSLLGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGNTKSRI 251
T ++APE L Y +DVWS GV+L+ I G P+ G +
Sbjct: 202 HIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 261
Query: 252 FDAVRTADLRFPSNPWDHISDSAKDLVMGM---LSTDPSQRLTARQVLD 297
F ++ + D S+ +L M M PSQR T +Q+++
Sbjct: 262 FKLLKEG------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 92/201 (45%), Gaps = 18/201 (8%)
Query: 49 LGWGQFGVIRV-CSDKF---TGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNV 104
LG G FG + + C D TGE+ A K++ + + EIEI+ L H ++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEG--CGPQLRSGWQREIEILRTLY-HEHI 73
Query: 105 VDLKAVYED--EDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIG 162
V K ED E V LVME G L L + A+ + Q+ + + Y H
Sbjct: 74 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC-VGLAQLLLFAQQICEGMAYLHAQH 132
Query: 163 VVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTV---GSP-FYIAPEVLA- 217
+HR L N+LL + +K+ DFGLA + G SP F+ APE L
Sbjct: 133 YIHRALAARNVLLD---NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 189
Query: 218 GGYNQAADVWSAGVILYILLS 238
+ A+DVWS GV LY LL+
Sbjct: 190 CKFYYASDVWSFGVTLYELLT 210
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 98/217 (45%), Gaps = 15/217 (6%)
Query: 34 NQISNLRER--FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDD-ERSVKL 90
N +N ER V G + G G FGV V A K +A +T ++ ++
Sbjct: 13 NVTNNFDERPISVGGNKXGEGGFGV--VYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQ 70
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEA--EARVLF 148
EI++ + H N+V+L D D + LV G L RL R
Sbjct: 71 EIKVXAKCQ-HENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKI 129
Query: 149 MQ-LMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEP-GQSLLGT-- 204
Q + + HE +HRD+K NILL ++ K++DFGLA E Q + +
Sbjct: 130 AQGAANGINFLHENHHIHRDIKSANILLDEAFTA---KISDFGLARASEKFAQXVXXSRI 186
Query: 205 VGSPFYIAPEVLAGGYNQAADVWSAGVILYILLSGMP 241
VG+ Y APE L G +D++S GV+L +++G+P
Sbjct: 187 VGTTAYXAPEALRGEITPKSDIYSFGVVLLEIITGLP 223
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 105/237 (44%), Gaps = 34/237 (14%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDD--ERSVKL-EIEIMT 96
RE G+ LG G FG + + + +A L D ER + E+++MT
Sbjct: 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMT 103
Query: 97 RLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRL----EKFG---------RFSEAE 143
+L H N+V+L ++L+ E C G+L + L EKF + E E
Sbjct: 104 QLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE 163
Query: 144 ARVLFMQLMQVVLYCHEIG----------VVHRDLKPENILLATKASSSPIKLADFGLAT 193
+ + ++ + +++ VHRDL N+L+ +K+ DFGLA
Sbjct: 164 EDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVT---HGKVVKICDFGLAR 220
Query: 194 YI--EPGQSLLGTVGSPF-YIAPEVLAGG-YNQAADVWSAGVILYILLS-GMPPFWG 245
I + + G P ++APE L G Y +DVWS G++L+ + S G+ P+ G
Sbjct: 221 DIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 92/201 (45%), Gaps = 18/201 (8%)
Query: 49 LGWGQFGVIRV-CSDKF---TGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNV 104
LG G FG + + C D TGE+ A K++ + + EIEI+ L H ++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEG--CGPQLRSGWQREIEILRTLY-HEHI 72
Query: 105 VDLKAVYED--EDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIG 162
V K ED E V LVME G L L + A+ + Q+ + + Y H
Sbjct: 73 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC-VGLAQLLLFAQQICEGMAYLHAQH 131
Query: 163 VVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTV---GSP-FYIAPEVLA- 217
+HR L N+LL + +K+ DFGLA + G SP F+ APE L
Sbjct: 132 YIHRALAARNVLLD---NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKE 188
Query: 218 GGYNQAADVWSAGVILYILLS 238
+ A+DVWS GV LY LL+
Sbjct: 189 CKFYYASDVWSFGVTLYELLT 209
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 120/289 (41%), Gaps = 42/289 (14%)
Query: 40 RERFVLGQQLGWGQFG------VIRVCSDKFTGEV-FACKSIAKDRLVTIDDERSVKLEI 92
R+R VLG+ LG G FG I + DK A K + D T D + E+
Sbjct: 16 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEM 73
Query: 93 EIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF---------------- 136
E+M + H N+++L + +++++E + G L L+
Sbjct: 74 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 133
Query: 137 GRFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIE 196
+ S + Q+ + + Y +HRDL N+L+ + +K+ADFGLA I
Sbjct: 134 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIH 190
Query: 197 PGQSLLGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGNTKSRI 251
T ++APE L Y +DVWS GV+L+ I G P+ G +
Sbjct: 191 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 250
Query: 252 FDAVRTADLRFPSNPWDHISDSAKDLVMGM---LSTDPSQRLTARQVLD 297
F ++ + D S+ +L M M PSQR T +Q+++
Sbjct: 251 FKLLKEG------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 293
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 120/289 (41%), Gaps = 42/289 (14%)
Query: 40 RERFVLGQQLGWGQFG------VIRVCSDKFTGEV-FACKSIAKDRLVTIDDERSVKLEI 92
R+R VLG+ LG G FG I + DK A K + D T D + E+
Sbjct: 19 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEM 76
Query: 93 EIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFG--------------- 137
E+M + H N+++L + +++++E + G L L+
Sbjct: 77 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 136
Query: 138 -RFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIE 196
+ S + Q+ + + Y +HRDL N+L+ + +K+ADFGLA I
Sbjct: 137 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIH 193
Query: 197 PGQSLLGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGNTKSRI 251
T ++APE L Y +DVWS GV+L+ I G P+ G +
Sbjct: 194 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 253
Query: 252 FDAVRTADLRFPSNPWDHISDSAKDLVMGM---LSTDPSQRLTARQVLD 297
F ++ + D S+ +L M M PSQR T +Q+++
Sbjct: 254 FKLLKEG------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 296
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 120/289 (41%), Gaps = 42/289 (14%)
Query: 40 RERFVLGQQLGWGQFG------VIRVCSDKFTGEV-FACKSIAKDRLVTIDDERSVKLEI 92
R+R VLG+ LG G FG I + DK A K + D T D + E+
Sbjct: 27 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEM 84
Query: 93 EIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFG--------------- 137
E+M + H N+++L + +++++E + G L L+
Sbjct: 85 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 144
Query: 138 -RFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIE 196
+ S + Q+ + + Y +HRDL N+L+ + +K+ADFGLA I
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIH 201
Query: 197 PGQSLLGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGNTKSRI 251
T ++APE L Y +DVWS GV+L+ I G P+ G +
Sbjct: 202 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 261
Query: 252 FDAVRTADLRFPSNPWDHISDSAKDLVMGM---LSTDPSQRLTARQVLD 297
F ++ + D S+ +L M M PSQR T +Q+++
Sbjct: 262 FKLLKEG------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 120/288 (41%), Gaps = 40/288 (13%)
Query: 40 RERFVLGQQLGWGQFG------VIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIE 93
R++ LG+ LG G FG + + DK V + KD T D + E+E
Sbjct: 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEME 138
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-----------KFGRFSEA 142
+M + H N+++L + +++++E + G L L R E
Sbjct: 139 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 198
Query: 143 EARVLFM-----QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEP 197
+ + QL + + Y +HRDL N+L+ ++ +K+ADFGLA I
Sbjct: 199 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINN 255
Query: 198 GQSLLGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIF 252
T ++APE L Y +DVWS GV+++ I G P+ G +F
Sbjct: 256 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 315
Query: 253 DAVRTADLRFPSNPWDHISDSAKDLVMGM---LSTDPSQRLTARQVLD 297
++ + D ++ +L M M PSQR T +Q+++
Sbjct: 316 KLLKEG------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 357
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 14/182 (7%)
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGEL--FHRLEKFGRFSEAEARVLF 148
E IM + HPN++ L+ V +V E G L F R G+F+ + +
Sbjct: 100 EASIMGQFD-HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD-GQFTIMQLVGML 157
Query: 149 MQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIE--PGQSLLGTVG 206
+ + Y ++G VHRDL N+L+ S+ K++DFGL+ +E P + T G
Sbjct: 158 RGVGAGMRYLSDLGYVHRDLAARNVLV---DSNLVCKVSDFGLSRVLEDDPDAAYTTTGG 214
Query: 207 S-PF-YIAPEVLA-GGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIFDAVRTADLRF 262
P + APE +A ++ A+DVWS GV+++ +L G P+W T + +V R
Sbjct: 215 KIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG-YRL 273
Query: 263 PS 264
P+
Sbjct: 274 PA 275
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 120/288 (41%), Gaps = 40/288 (13%)
Query: 40 RERFVLGQQLGWGQFG------VIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIE 93
R++ LG+ LG G FG + + DK V + KD T D + E+E
Sbjct: 23 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEME 81
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-----------KFGRFSEA 142
+M + H N+++L + +++++E + G L L R E
Sbjct: 82 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 141
Query: 143 EARVLFM-----QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEP 197
+ + QL + + Y +HRDL N+L+ ++ +K+ADFGLA I
Sbjct: 142 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINN 198
Query: 198 GQSLLGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIF 252
T ++APE L Y +DVWS GV+++ I G P+ G +F
Sbjct: 199 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 258
Query: 253 DAVRTADLRFPSNPWDHISDSAKDLVMGM---LSTDPSQRLTARQVLD 297
++ + D ++ +L M M PSQR T +Q+++
Sbjct: 259 KLLKEG------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 300
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 14/182 (7%)
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGEL--FHRLEKFGRFSEAEARVLF 148
E IM + HPN++ L+ V +V E G L F R G+F+ + +
Sbjct: 100 EASIMGQFD-HPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD-GQFTIMQLVGML 157
Query: 149 MQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIE--PGQSLLGTVG 206
+ + Y ++G VHRDL N+L+ S+ K++DFGL+ +E P + T G
Sbjct: 158 RGVGAGMRYLSDLGYVHRDLAARNVLV---DSNLVCKVSDFGLSRVLEDDPDAAXTTTGG 214
Query: 207 S-PF-YIAPEVLA-GGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIFDAVRTADLRF 262
P + APE +A ++ A+DVWS GV+++ +L G P+W T + +V R
Sbjct: 215 KIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEG-YRL 273
Query: 263 PS 264
P+
Sbjct: 274 PA 275
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 120/289 (41%), Gaps = 42/289 (14%)
Query: 40 RERFVLGQQLGWGQFG------VIRVCSDKFTGEV-FACKSIAKDRLVTIDDERSVKLEI 92
R+R VLG+ LG G FG I + DK A K + D T D + E+
Sbjct: 27 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEM 84
Query: 93 EIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF---------------- 136
E+M + H N+++L + +++++E + G L L+
Sbjct: 85 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPE 144
Query: 137 GRFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIE 196
+ S + Q+ + + Y +HRDL N+L+ + +K+ADFGLA I
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIH 201
Query: 197 PGQSLLGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGNTKSRI 251
T ++APE L Y +DVWS GV+L+ I G P+ G +
Sbjct: 202 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 261
Query: 252 FDAVRTADLRFPSNPWDHISDSAKDLVMGM---LSTDPSQRLTARQVLD 297
F ++ + D S+ +L M M PSQR T +Q+++
Sbjct: 262 FKLLKEG------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 120/289 (41%), Gaps = 42/289 (14%)
Query: 40 RERFVLGQQLGWGQFG------VIRVCSDKFTGEV-FACKSIAKDRLVTIDDERSVKLEI 92
R+R VLG+ LG G FG I + DK A K + D T D + E+
Sbjct: 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEM 125
Query: 93 EIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF---------------- 136
E+M + H N+++L + +++++E + G L L+
Sbjct: 126 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 185
Query: 137 GRFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIE 196
+ S + Q+ + + Y +HRDL N+L+ + +K+ADFGLA I
Sbjct: 186 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIH 242
Query: 197 PGQSLLGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGNTKSRI 251
T ++APE L Y +DVWS GV+L+ I G P+ G +
Sbjct: 243 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 302
Query: 252 FDAVRTADLRFPSNPWDHISDSAKDLVMGM---LSTDPSQRLTARQVLD 297
F ++ + D S+ +L M M PSQR T +Q+++
Sbjct: 303 FKLLKEG------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 345
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 120/289 (41%), Gaps = 42/289 (14%)
Query: 40 RERFVLGQQLGWGQFG------VIRVCSDKFTGEV-FACKSIAKDRLVTIDDERSVKLEI 92
R+R VLG+ LG G FG I + DK A K + D T D + E+
Sbjct: 12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEM 69
Query: 93 EIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFG--------------- 137
E+M + H N+++L + +++++E + G L L+
Sbjct: 70 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPE 129
Query: 138 -RFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIE 196
+ S + Q+ + + Y +HRDL N+L+ + +K+ADFGLA I
Sbjct: 130 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIH 186
Query: 197 PGQSLLGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGNTKSRI 251
T ++APE L Y +DVWS GV+L+ I G P+ G +
Sbjct: 187 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 246
Query: 252 FDAVRTADLRFPSNPWDHISDSAKDLVMGM---LSTDPSQRLTARQVLD 297
F ++ + D S+ +L M M PSQR T +Q+++
Sbjct: 247 FKLLKEG------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 289
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 120/288 (41%), Gaps = 40/288 (13%)
Query: 40 RERFVLGQQLGWGQFG------VIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIE 93
R++ LG+ LG G FG + + DK V + KD T D + E+E
Sbjct: 26 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEME 84
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-----------KFGRFSEA 142
+M + H N+++L + +++++E + G L L R E
Sbjct: 85 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 144
Query: 143 EARVLFM-----QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEP 197
+ + QL + + Y +HRDL N+L+ ++ +K+ADFGLA I
Sbjct: 145 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINN 201
Query: 198 GQSLLGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIF 252
T ++APE L Y +DVWS GV+++ I G P+ G +F
Sbjct: 202 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 261
Query: 253 DAVRTADLRFPSNPWDHISDSAKDLVMGM---LSTDPSQRLTARQVLD 297
++ + D ++ +L M M PSQR T +Q+++
Sbjct: 262 KLLKEG------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 303
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 119/259 (45%), Gaps = 21/259 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
RE L ++LG GQFG + + + +V A K++ + + E +M L
Sbjct: 187 RESLKLEKKLGAGQFGEVWMATYNKHTKV-AVKTMKPGSMSV----EAFLAEANVMKTLQ 241
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVLY 157
H +V L AV E ++++ E A G L L+ + +++ Q+ + + +
Sbjct: 242 -HDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAF 299
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ +HRDL+ NIL+ ++S K+ADFGLA IE + G+ F + APE
Sbjct: 300 IEQRNYIHRDLRAANILV---SASLVCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPE 355
Query: 215 VLA-GGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
+ G + +DVWS G++L I+ G P+ G + + A+ R P ++ +
Sbjct: 356 AINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-YRMPRP--ENCPE 412
Query: 273 SAKDLVMGMLSTDPSQRLT 291
+++M P +R T
Sbjct: 413 ELYNIMMRCWKNRPEERPT 431
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 120/288 (41%), Gaps = 40/288 (13%)
Query: 40 RERFVLGQQLGWGQFG------VIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIE 93
R++ LG+ LG G FG + + DK V + KD T D + E+E
Sbjct: 21 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEME 79
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-----------KFGRFSEA 142
+M + H N+++L + +++++E + G L L R E
Sbjct: 80 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 139
Query: 143 EARVLFM-----QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEP 197
+ + QL + + Y +HRDL N+L+ ++ +K+ADFGLA I
Sbjct: 140 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLV---TENNVMKIADFGLARDINN 196
Query: 198 GQSLLGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIF 252
T ++APE L Y +DVWS GV+++ I G P+ G +F
Sbjct: 197 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 256
Query: 253 DAVRTADLRFPSNPWDHISDSAKDLVMGM---LSTDPSQRLTARQVLD 297
++ + D ++ +L M M PSQR T +Q+++
Sbjct: 257 KLLKEG------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 298
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 120/289 (41%), Gaps = 42/289 (14%)
Query: 40 RERFVLGQQLGWGQFG------VIRVCSDKFTGEV-FACKSIAKDRLVTIDDERSVKLEI 92
R+R VLG+ LG G FG I + DK A K + D T D + E+
Sbjct: 20 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEM 77
Query: 93 EIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF---------------- 136
E+M + H N+++L + +++++E + G L L+
Sbjct: 78 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 137
Query: 137 GRFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIE 196
+ S + Q+ + + Y +HRDL N+L+ + +K+ADFGLA I
Sbjct: 138 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIH 194
Query: 197 PGQSLLGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGNTKSRI 251
T ++APE L Y +DVWS GV+L+ I G P+ G +
Sbjct: 195 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 254
Query: 252 FDAVRTADLRFPSNPWDHISDSAKDLVMGM---LSTDPSQRLTARQVLD 297
F ++ + D S+ +L M M PSQR T +Q+++
Sbjct: 255 FKLLKEG------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 297
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 120/289 (41%), Gaps = 42/289 (14%)
Query: 40 RERFVLGQQLGWGQFG------VIRVCSDKFTGEV-FACKSIAKDRLVTIDDERSVKLEI 92
R+R VLG+ LG G FG I + DK A K + D T D + E+
Sbjct: 27 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEM 84
Query: 93 EIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF---------------- 136
E+M + H N+++L + +++++E + G L L+
Sbjct: 85 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPE 144
Query: 137 GRFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIE 196
+ S + Q+ + + Y +HRDL N+L+ + +K+ADFGLA I
Sbjct: 145 EQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV---TEDNVMKIADFGLARDIH 201
Query: 197 PGQSLLGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGNTKSRI 251
T ++APE L Y +DVWS GV+L+ I G P+ G +
Sbjct: 202 HIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 261
Query: 252 FDAVRTADLRFPSNPWDHISDSAKDLVMGM---LSTDPSQRLTARQVLD 297
F ++ + D S+ +L M M PSQR T +Q+++
Sbjct: 262 FKLLKEG------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE 304
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 119/288 (41%), Gaps = 40/288 (13%)
Query: 40 RERFVLGQQLGWGQFG------VIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIE 93
R++ LG+ LG G FG + + DK V + KD T D + E+E
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEME 92
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-----------KFGRFSEA 142
+M + H N++ L + +++++E + G L L R E
Sbjct: 93 MMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 143 EARVLFM-----QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEP 197
+ + QL + + Y +HRDL N+L+ ++ +K+ADFGLA I
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINN 209
Query: 198 GQSLLGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIF 252
T ++APE L Y +DVWS GV+++ I G P+ G +F
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
Query: 253 DAVRTADLRFPSNPWDHISDSAKDLVMGM---LSTDPSQRLTARQVLD 297
++ + D ++ +L M M PSQR T +Q+++
Sbjct: 270 KLLKEG------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 119/288 (41%), Gaps = 40/288 (13%)
Query: 40 RERFVLGQQLGWGQFG------VIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIE 93
R++ LG+ LG G FG + + DK V + KD T D + E+E
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEME 92
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-----------KFGRFSEA 142
+M + H N++ L + +++++E + G L L R E
Sbjct: 93 MMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 143 EARVLFM-----QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEP 197
+ + QL + + Y +HRDL N+L+ ++ +K+ADFGLA I
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINN 209
Query: 198 GQSLLGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIF 252
T ++APE L Y +DVWS GV+++ I G P+ G +F
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
Query: 253 DAVRTADLRFPSNPWDHISDSAKDLVMGM---LSTDPSQRLTARQVLD 297
++ + D ++ +L M M PSQR T +Q+++
Sbjct: 270 KLLKEG------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 120/288 (41%), Gaps = 40/288 (13%)
Query: 40 RERFVLGQQLGWGQFG------VIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIE 93
R++ LG+ LG G FG + + DK V + KD T D + E+E
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEME 92
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-----------KFGRFSEA 142
+M + H N+++L + +++++E + G L L R E
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 143 EARVLFM-----QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEP 197
+ + QL + + Y +HRDL N+L+ ++ +++ADFGLA I
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMRIADFGLARDINN 209
Query: 198 GQSLLGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIF 252
T ++APE L Y +DVWS GV+++ I G P+ G +F
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
Query: 253 DAVRTADLRFPSNPWDHISDSAKDLVMGM---LSTDPSQRLTARQVLD 297
++ + D ++ +L M M PSQR T +Q+++
Sbjct: 270 KLLKEG------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 114/271 (42%), Gaps = 30/271 (11%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSG 100
+ ++ Q+LG G F + + G +A K I L +R M RL
Sbjct: 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRI----LCHEQQDREEAQREADMHRLFN 84
Query: 101 HPNVVDLKAVYEDE----DYVHLVMELCAGGELFHRLEKF---GRF-SEAEARVLFMQLM 152
HPN++ L A E L++ G L++ +E+ G F +E + L + +
Sbjct: 85 HPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGIC 144
Query: 153 QVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-TYIEPGQSLL------GTV 205
+ + H G HRDLKP NILL + + L A ++E + L
Sbjct: 145 RGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQR 204
Query: 206 GSPFYIAPEVLAGG----YNQAADVWSAGVILYILLSGMPPFWGNTKSRIFDAVRTA--- 258
+ Y APE+ + ++ DVWS G +LY ++ G P+ + + D+V A
Sbjct: 205 CTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY--DMVFQKGDSVALAVQN 262
Query: 259 DLRFPSNPWDHISDSAKDLVMGMLSTDPSQR 289
L P +P S + L+ M++ DP QR
Sbjct: 263 QLSIPQSPRH--SSALWQLLNSMMTVDPHQR 291
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 99/199 (49%), Gaps = 11/199 (5%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDL 107
+LG G GV+ + +G + A K I + I ++ + E++++ + P +V
Sbjct: 23 ELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQ--IIRELQVLHECNS-PYIVGF 79
Query: 108 KAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIG-VVHR 166
+ + + + ME GG L L++ R E + + +++ + Y E ++HR
Sbjct: 80 YGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHR 139
Query: 167 DLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT-VGSPFYIAPEVLAG-GYNQAA 224
D+KP NIL+ ++ IKL DFG++ + S+ + VG+ Y+APE L G Y+ +
Sbjct: 140 DVKPSNILVNSRGE---IKLCDFGVSGQLI--DSMANSFVGTRSYMAPERLQGTHYSVQS 194
Query: 225 DVWSAGVILYILLSGMPPF 243
D+WS G+ L L G P
Sbjct: 195 DIWSMGLSLVELAVGRYPI 213
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEV-FACKSIAKDRLVTIDDERSVKLEIEIMTRL 98
RE L ++LG GQFG V + G A KS+ + + + E +M +L
Sbjct: 20 RETLKLVERLGAGQFG--EVWMGYYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQL 73
Query: 99 SGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVL 156
H +V L AV E ++++ E G L L+ ++L M Q+ + +
Sbjct: 74 Q-HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 131
Query: 157 YCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAP 213
+ E +HRDL+ NIL++ S K+ADFGLA IE + G+ F + AP
Sbjct: 132 FIEERNYIHRDLRAANILVSDTLSC---KIADFGLARLIEDNEX-TAREGAKFPIKWTAP 187
Query: 214 EVL-AGGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRI 251
E + G + +DVWS G++L I+ G P+ G T +
Sbjct: 188 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 227
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 119/259 (45%), Gaps = 21/259 (8%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
RE L ++LG GQFG + + + +V A K++ + + E +M L
Sbjct: 14 RESLKLEKKLGAGQFGEVWMATYNKHTKV-AVKTMKPGSMSV----EAFLAEANVMKTLQ 68
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVLY 157
H +V L AV E ++++ E A G L L+ + +++ Q+ + + +
Sbjct: 69 -HDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAF 126
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ +HRDL+ NIL+ ++S K+ADFGLA IE + G+ F + APE
Sbjct: 127 IEQRNYIHRDLRAANILV---SASLVCKIADFGLARVIEDNE-YTAREGAKFPIKWTAPE 182
Query: 215 VLA-GGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
+ G + +DVWS G++L I+ G P+ G + + A+ R P ++ +
Sbjct: 183 AINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-YRMPRP--ENCPE 239
Query: 273 SAKDLVMGMLSTDPSQRLT 291
+++M P +R T
Sbjct: 240 ELYNIMMRCWKNRPEERPT 258
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEV-FACKSIAKDRLVTIDDERSVKLEIEIMTRL 98
RE L ++LG GQFG V + G A KS+ + + + E +M +L
Sbjct: 18 RETLKLVERLGAGQFG--EVWMGYYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQL 71
Query: 99 SGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVL 156
H +V L AV E ++++ E G L L+ ++L M Q+ + +
Sbjct: 72 Q-HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 129
Query: 157 YCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAP 213
+ E +HRDL+ NIL++ S K+ADFGLA IE + G+ F + AP
Sbjct: 130 FIEERNYIHRDLRAANILVSDTLSC---KIADFGLARLIEDNEX-TAREGAKFPIKWTAP 185
Query: 214 EVL-AGGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRI 251
E + G + +DVWS G++L I+ G P+ G T +
Sbjct: 186 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 225
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEV-FACKSIAKDRLVTIDDERSVKLEIEIMTRL 98
RE L ++LG GQFG V + G A KS+ + + + E +M +L
Sbjct: 17 RETLKLVERLGAGQFG--EVWMGYYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQL 70
Query: 99 SGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVL 156
H +V L AV E ++++ E G L L+ ++L M Q+ + +
Sbjct: 71 Q-HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 128
Query: 157 YCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAP 213
+ E +HRDL+ NIL++ S K+ADFGLA IE + G+ F + AP
Sbjct: 129 FIEERNYIHRDLRAANILVSDTLSC---KIADFGLARLIEDNE-YTAREGAKFPIKWTAP 184
Query: 214 EVL-AGGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRI 251
E + G + +DVWS G++L I+ G P+ G T +
Sbjct: 185 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 224
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 92/196 (46%), Gaps = 16/196 (8%)
Query: 67 EVFACKSIAKDRLV-------TIDDERSVKLEIEIMTRLSGH---PNVVDLKAVYEDEDY 116
+V+ + ++R+V T+ + + + R +G P+VV + E +
Sbjct: 49 DVYEAEDTVRERIVALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHDFGEIDGQ 108
Query: 117 VHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLA 176
+++ L G +L L + G + A + Q+ + H G HRD+KPENIL++
Sbjct: 109 LYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVS 168
Query: 177 TKASSSPIKLADFGL--ATYIEPGQSLLGTVGSPFYIAPEVLAGGY-NQAADVWSAGVIL 233
+ L DFG+ AT E L TVG+ +Y APE + + AD+++ +L
Sbjct: 169 ADDFA---YLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCVL 225
Query: 234 YILLSGMPPFWGNTKS 249
Y L+G PP+ G+ S
Sbjct: 226 YECLTGSPPYQGDQLS 241
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEV-FACKSIAKDRLVTIDDERSVKLEIEIMTRL 98
RE L ++LG GQFG V + G A KS+ + + + E +M +L
Sbjct: 18 RETLKLVERLGAGQFG--EVWMGYYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQL 71
Query: 99 SGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVL 156
H +V L AV E ++++ E G L L+ ++L M Q+ + +
Sbjct: 72 Q-HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 129
Query: 157 YCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAP 213
+ E +HRDL+ NIL++ S K+ADFGLA IE + G+ F + AP
Sbjct: 130 FIEERNYIHRDLRAANILVSDTLSC---KIADFGLARLIEDNE-YTAREGAKFPIKWTAP 185
Query: 214 EVL-AGGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRI 251
E + G + +DVWS G++L I+ G P+ G T +
Sbjct: 186 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 225
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEV-FACKSIAKDRLVTIDDERSVKLEIEIMTRL 98
RE L ++LG GQFG V + G A KS+ + + + E +M +L
Sbjct: 12 RETLKLVERLGAGQFG--EVWMGYYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQL 65
Query: 99 SGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVL 156
H +V L AV E ++++ E G L L+ ++L M Q+ + +
Sbjct: 66 Q-HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 157 YCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAP 213
+ E +HRDL+ NIL++ S K+ADFGLA IE + G+ F + AP
Sbjct: 124 FIEERNYIHRDLRAANILVSDTLSC---KIADFGLARLIEDNEX-TAREGAKFPIKWTAP 179
Query: 214 EVL-AGGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRI 251
E + G + +DVWS G++L I+ G P+ G T +
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEV-FACKSIAKDRLVTIDDERSVKLEIEIMTRL 98
RE L ++LG GQFG V + G A KS+ + + + E +M +L
Sbjct: 22 RETLKLVERLGAGQFG--EVWMGYYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQL 75
Query: 99 SGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVL 156
H +V L AV E ++++ E G L L+ ++L M Q+ + +
Sbjct: 76 Q-HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 133
Query: 157 YCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAP 213
+ E +HRDL+ NIL++ S K+ADFGLA IE + G+ F + AP
Sbjct: 134 FIEERNYIHRDLRAANILVSDTLSC---KIADFGLARLIEDNE-YTAREGAKFPIKWTAP 189
Query: 214 EVL-AGGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRI 251
E + G + +DVWS G++L I+ G P+ G T +
Sbjct: 190 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 229
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEV-FACKSIAKDRLVTIDDERSVKLEIEIMTRL 98
RE L ++LG GQFG V + G A KS+ + + + E +M +L
Sbjct: 12 RETLKLVERLGAGQFG--EVWMGYYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQL 65
Query: 99 SGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVL 156
H +V L AV E ++++ E G L L+ ++L M Q+ + +
Sbjct: 66 Q-HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 157 YCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAP 213
+ E +HRDL+ NIL++ S K+ADFGLA IE + G+ F + AP
Sbjct: 124 FIEERNYIHRDLRAANILVSDTLSC---KIADFGLARLIEDNEX-TAREGAKFPIKWTAP 179
Query: 214 EVL-AGGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRI 251
E + G + +DVWS G++L I+ G P+ G T +
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEV-FACKSIAKDRLVTIDDERSVKLEIEIMTRL 98
RE L ++LG GQFG V + G A KS+ + + + E +M +L
Sbjct: 21 RETLKLVERLGAGQFG--EVWMGYYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQL 74
Query: 99 SGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVL 156
H +V L AV E ++++ E G L L+ ++L M Q+ + +
Sbjct: 75 Q-HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 132
Query: 157 YCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAP 213
+ E +HRDL+ NIL++ S K+ADFGLA IE + G+ F + AP
Sbjct: 133 FIEERNYIHRDLRAANILVSDTLSC---KIADFGLARLIEDNEX-TAREGAKFPIKWTAP 188
Query: 214 EVL-AGGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRI 251
E + G + +DVWS G++L I+ G P+ G T +
Sbjct: 189 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 228
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 130/301 (43%), Gaps = 51/301 (16%)
Query: 27 AETILDTNQISNLRERFVLGQQLGWGQFG-VIRVCSDKFTGE----VFACKSIAKDRLVT 81
A IL+ + R+ VLG+ LG G+FG V++ + G A K + ++ +
Sbjct: 9 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN--AS 66
Query: 82 IDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGEL---FHRLEKFG- 137
+ R + E ++ +++ HP+V+ L + + L++E G L K G
Sbjct: 67 PSELRDLLSEFNVLKQVN-HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGP 125
Query: 138 ------------RFSEAEARVLFM--------QLMQVVLYCHEIGVVHRDLKPENILLAT 177
+ R L M Q+ Q + Y E+ +VHRDL NIL+
Sbjct: 126 GYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILV-- 183
Query: 178 KASSSPIKLADFGLA-------TYIEPGQSLLGTVGSPFYIAPEVLAGGYNQAADVWSAG 230
A +K++DFGL+ +Y++ Q G + + + Y +DVWS G
Sbjct: 184 -AEGRKMKISDFGLSRDVYEEDSYVKRSQ---GRIPVKWMAIESLFDHIYTTQSDVWSFG 239
Query: 231 VILY-ILLSGMPPFWGNTKSRIFDAVRTAD-LRFPSNPWDHISDSAKDLVMGMLSTDPSQ 288
V+L+ I+ G P+ G R+F+ ++T + P D+ S+ L++ +P +
Sbjct: 240 VLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERP----DNCSEEMYRLMLQCWKQEPDK 295
Query: 289 R 289
R
Sbjct: 296 R 296
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEV-FACKSIAKDRLVTIDDERSVKLEIEIMTRL 98
RE L ++LG GQFG V + G A KS+ + + + E +M +L
Sbjct: 14 RETLKLVERLGAGQFG--EVWMGYYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQL 67
Query: 99 SGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVL 156
H +V L AV E ++++ E G L L+ ++L M Q+ + +
Sbjct: 68 Q-HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 125
Query: 157 YCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAP 213
+ E +HRDL+ NIL++ S K+ADFGLA IE + G+ F + AP
Sbjct: 126 FIEERNYIHRDLRAANILVSDTLSC---KIADFGLARLIEDNEX-TAREGAKFPIKWTAP 181
Query: 214 EVL-AGGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRI 251
E + G + +DVWS G++L I+ G P+ G T +
Sbjct: 182 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 221
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEV-FACKSIAKDRLVTIDDERSVKLEIEIMTRL 98
RE L ++LG GQFG V + G A KS+ + + + E +M +L
Sbjct: 13 RETLKLVERLGAGQFG--EVWMGYYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQL 66
Query: 99 SGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVL 156
H +V L AV E ++++ E G L L+ ++L M Q+ + +
Sbjct: 67 Q-HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 124
Query: 157 YCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAP 213
+ E +HRDL+ NIL++ S K+ADFGLA IE + G+ F + AP
Sbjct: 125 FIEERNYIHRDLRAANILVSDTLSC---KIADFGLARLIEDNEX-TAREGAKFPIKWTAP 180
Query: 214 EVL-AGGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRI 251
E + G + +DVWS G++L I+ G P+ G T +
Sbjct: 181 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 220
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 119/288 (41%), Gaps = 40/288 (13%)
Query: 40 RERFVLGQQLGWGQFG------VIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIE 93
R++ LG+ LG G FG + + DK V + KD T D + E+E
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEME 92
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-----------KFGRFSEA 142
+M + H N+++L + +++++ + G L L R E
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 143 EARVLFM-----QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEP 197
+ + QL + + Y +HRDL N+L+ ++ +K+ADFGLA I
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINN 209
Query: 198 GQSLLGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIF 252
T ++APE L Y +DVWS GV+++ I G P+ G +F
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
Query: 253 DAVRTADLRFPSNPWDHISDSAKDLVMGM---LSTDPSQRLTARQVLD 297
++ + D ++ +L M M PSQR T +Q+++
Sbjct: 270 KLLKEG------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEV-FACKSIAKDRLVTIDDERSVKLEIEIMTRL 98
RE L ++LG GQFG V + G A KS+ + + + E +M +L
Sbjct: 7 RETLKLVERLGAGQFG--EVWMGYYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQL 60
Query: 99 SGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVL 156
H +V L AV E ++++ E G L L+ ++L M Q+ + +
Sbjct: 61 Q-HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 118
Query: 157 YCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAP 213
+ E +HRDL+ NIL++ S K+ADFGLA IE + G+ F + AP
Sbjct: 119 FIEERNYIHRDLRAANILVSDTLSC---KIADFGLARLIEDNE-YTAREGAKFPIKWTAP 174
Query: 214 EVL-AGGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRI 251
E + G + +DVWS G++L I+ G P+ G T +
Sbjct: 175 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 214
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEV-FACKSIAKDRLVTIDDERSVKLEIEIMTRL 98
RE L ++LG GQFG V + G A KS+ + + + E +M +L
Sbjct: 12 RETLKLVERLGAGQFG--EVWMGYYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQL 65
Query: 99 SGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVL 156
H +V L AV E ++++ E G L L+ ++L M Q+ + +
Sbjct: 66 Q-HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 157 YCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAP 213
+ E +HRDL+ NIL++ S K+ADFGLA IE + G+ F + AP
Sbjct: 124 FIEERNYIHRDLRAANILVSDTLSC---KIADFGLARLIEDNE-YTAREGAKFPIKWTAP 179
Query: 214 EVL-AGGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRI 251
E + G + +DVWS G++L I+ G P+ G T +
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 219
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 128/298 (42%), Gaps = 45/298 (15%)
Query: 27 AETILDTNQISNLRERFVLGQQLGWGQFG-VIRVCSDKFTGE----VFACKSIAKDRLVT 81
A IL+ + R+ VLG+ LG G+FG V++ + G A K + ++ +
Sbjct: 9 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN--AS 66
Query: 82 IDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGEL---FHRLEKFG- 137
+ R + E ++ +++ HP+V+ L + + L++E G L K G
Sbjct: 67 PSELRDLLSEFNVLKQVN-HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGP 125
Query: 138 ------------RFSEAEARVLFM--------QLMQVVLYCHEIGVVHRDLKPENILLAT 177
+ R L M Q+ Q + Y E+ +VHRDL NIL+
Sbjct: 126 GYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILV-- 183
Query: 178 KASSSPIKLADFGLATYIEPGQSLL----GTVGSPFYIAPEVLAGGYNQAADVWSAGVIL 233
A +K++DFGL+ + S + G + + + Y +DVWS GV+L
Sbjct: 184 -AEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242
Query: 234 Y-ILLSGMPPFWGNTKSRIFDAVRTAD-LRFPSNPWDHISDSAKDLVMGMLSTDPSQR 289
+ I+ G P+ G R+F+ ++T + P D+ S+ L++ +P +R
Sbjct: 243 WEIVTLGGNPYPGIPPERLFNLLKTGHRMERP----DNCSEEMYRLMLQCWKQEPDKR 296
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 122/290 (42%), Gaps = 49/290 (16%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTI---DDERSVKLEIEIMT 96
R G+ LG G FG + + G+ A +A L + D++ ++ E++IM+
Sbjct: 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 104
Query: 97 RLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFG----------------RFS 140
L H N+V+L V ++ E C G+L + L + + S
Sbjct: 105 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLS 164
Query: 141 EAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-------T 193
+ Q+ Q + + +HRD+ N+LL + K+ DFGLA
Sbjct: 165 SRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA---KIGDFGLARDIMNDSN 221
Query: 194 YIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWG---NTK 248
YI G + L ++APE + Y +DVWS G++L+ + S G+ P+ G N+K
Sbjct: 222 YIVKGNARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSK 277
Query: 249 --SRIFDAVRTADLRF-PSNPWDHISDSAKDLVMGMLSTDPSQRLTARQV 295
+ D + A F P N + ++ + +P+ R T +Q+
Sbjct: 278 FYKLVKDGYQMAQPAFAPKNIY--------SIMQACWALEPTHRPTFQQI 319
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 128/298 (42%), Gaps = 45/298 (15%)
Query: 27 AETILDTNQISNLRERFVLGQQLGWGQFG-VIRVCSDKFTGE----VFACKSIAKDRLVT 81
A IL+ + R+ VLG+ LG G+FG V++ + G A K + ++ +
Sbjct: 9 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN--AS 66
Query: 82 IDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGEL---FHRLEKFG- 137
+ R + E ++ +++ HP+V+ L + + L++E G L K G
Sbjct: 67 PSELRDLLSEFNVLKQVN-HPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGP 125
Query: 138 ------------RFSEAEARVLFM--------QLMQVVLYCHEIGVVHRDLKPENILLAT 177
+ R L M Q+ Q + Y E+ +VHRDL NIL+
Sbjct: 126 GYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILV-- 183
Query: 178 KASSSPIKLADFGLATYIEPGQSLL----GTVGSPFYIAPEVLAGGYNQAADVWSAGVIL 233
A +K++DFGL+ + S + G + + + Y +DVWS GV+L
Sbjct: 184 -AEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLL 242
Query: 234 Y-ILLSGMPPFWGNTKSRIFDAVRTAD-LRFPSNPWDHISDSAKDLVMGMLSTDPSQR 289
+ I+ G P+ G R+F+ ++T + P D+ S+ L++ +P +R
Sbjct: 243 WEIVTLGGNPYPGIPPERLFNLLKTGHRMERP----DNCSEEMYRLMLQCWKQEPDKR 296
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 119/288 (41%), Gaps = 40/288 (13%)
Query: 40 RERFVLGQQLGWGQFG------VIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIE 93
R++ LG+ LG G FG + + DK V + KD T D + E+E
Sbjct: 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEME 92
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-----------KFGRFSEA 142
+M + H N+++L + +++++ + G L L R E
Sbjct: 93 MMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEE 152
Query: 143 EARVLFM-----QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEP 197
+ + QL + + Y +HRDL N+L+ ++ +K+ADFGLA I
Sbjct: 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV---TENNVMKIADFGLARDINN 209
Query: 198 GQSLLGTVGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIF 252
T ++APE L Y +DVWS GV+++ I G P+ G +F
Sbjct: 210 IDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELF 269
Query: 253 DAVRTADLRFPSNPWDHISDSAKDLVMGM---LSTDPSQRLTARQVLD 297
++ + D ++ +L M M PSQR T +Q+++
Sbjct: 270 KLLKEG------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE 311
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 124/297 (41%), Gaps = 56/297 (18%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTI---DDERSVKLEIEIMT 96
R G+ LG G FG + + G+ A +A L + D++ ++ E++IM+
Sbjct: 30 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMS 89
Query: 97 RLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-------------------- 136
L H N+V+L V ++ E C G+L + L +
Sbjct: 90 HLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDK 149
Query: 137 --GRFSEAEARVLFM-QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA- 192
GR E + F Q+ Q + + +HRD+ N+LL + K+ DFGLA
Sbjct: 150 EDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA---KIGDFGLAR 206
Query: 193 ------TYIEPGQSLLGTVGSPFYIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFW 244
YI G + L ++APE + Y +DVWS G++L+ + S G+ P+
Sbjct: 207 DIMNDSNYIVKGNARLPVK----WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYP 262
Query: 245 G---NTK--SRIFDAVRTADLRF-PSNPWDHISDSAKDLVMGMLSTDPSQRLTARQV 295
G N+K + D + A F P N + ++ + +P+ R T +Q+
Sbjct: 263 GILVNSKFYKLVKDGYQMAQPAFAPKNIY--------SIMQACWALEPTHRPTFQQI 311
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
++LG GQFGV++ K+ G+ + K+ ++ D+ E ++M LS H +V
Sbjct: 30 KELGTGQFGVVKY--GKWRGQYDVAIKMIKEGSMSEDE---FIEEAKVMMNLS-HEKLVQ 83
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRL-EKFGRFSEAEARVLFMQLMQVVLYCHEIGVVH 165
L V + + ++ E A G L + L E RF + + + + + Y +H
Sbjct: 84 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLH 143
Query: 166 RDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPEVLA-GGYN 221
RDL N L+ + +K++DFGL+ Y+ + +VGS F + PEVL ++
Sbjct: 144 RDLAARNCLVNDQGV---VKVSDFGLSRYVLDDEE-TSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 222 QAADVWSAGVILYILLS-GMPPF 243
+D+W+ GV+++ + S G P+
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMPY 222
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 117/283 (41%), Gaps = 31/283 (10%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL---VTIDDERSVKLEIEIMT 96
R R G+ LG G FG + + + A ++A L + + ++ E+++++
Sbjct: 45 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLS 104
Query: 97 RLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-KFGRFSEAEARVLFM------ 149
L H N+V+L ++ E C G+L + L K F ++ M
Sbjct: 105 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 164
Query: 150 -----------QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPG 198
Q+ + + + +HRDL NILL + K+ DFGLA +I+
Sbjct: 165 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT---KICDFGLARHIKND 221
Query: 199 QSLL--GTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFD 253
+ + G P ++APE + Y +DVWS G+ L+ L S G P+ G F
Sbjct: 222 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 281
Query: 254 AVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVL 296
+ R S +H D++ DP +R T +Q++
Sbjct: 282 KMIKEGFRMLSP--EHAPAEMYDIMKTCWDADPLKRPTFKQIV 322
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
++LG GQFGV++ K+ G+ + K+ ++ D+ E ++M LS H +V
Sbjct: 30 KELGTGQFGVVKY--GKWRGQYDVAIKMIKEGSMSEDE---FIEEAKVMMNLS-HEKLVQ 83
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRL-EKFGRFSEAEARVLFMQLMQVVLYCHEIGVVH 165
L V + + ++ E A G L + L E RF + + + + + Y +H
Sbjct: 84 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLH 143
Query: 166 RDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPEVLA-GGYN 221
RDL N L+ + +K++DFGL+ Y+ + +VGS F + PEVL ++
Sbjct: 144 RDLAARNCLVNDQGV---VKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFS 199
Query: 222 QAADVWSAGVILYILLS-GMPPF 243
+D+W+ GV+++ + S G P+
Sbjct: 200 SKSDIWAFGVLMWEIYSLGKMPY 222
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
++LG GQFGV++ K+ G+ + K+ ++ D+ E ++M LS H +V
Sbjct: 14 KELGTGQFGVVKY--GKWRGQYDVAIKMIKEGSMSEDE---FIEEAKVMMNLS-HEKLVQ 67
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRL-EKFGRFSEAEARVLFMQLMQVVLYCHEIGVVH 165
L V + + ++ E A G L + L E RF + + + + + Y +H
Sbjct: 68 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLH 127
Query: 166 RDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPEVLA-GGYN 221
RDL N L+ + +K++DFGL+ Y+ + +VGS F + PEVL ++
Sbjct: 128 RDLAARNCLVNDQGV---VKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFS 183
Query: 222 QAADVWSAGVILYILLS-GMPPF 243
+D+W+ GV+++ + S G P+
Sbjct: 184 SKSDIWAFGVLMWEIYSLGKMPY 206
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 102/220 (46%), Gaps = 20/220 (9%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEV-FACKSIAKDRLVTIDDERSVKLEIEIMTRL 98
RE L ++LG GQFG V + G A KS+ + + + E +M +L
Sbjct: 8 RETLKLVERLGAGQFG--EVWMGYYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQL 61
Query: 99 SGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVL 156
H +V L AV E ++++ E G L L+ ++L M Q+ + +
Sbjct: 62 Q-HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 119
Query: 157 YCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAP 213
+ E +HR+L+ NIL++ S K+ADFGLA IE + G+ F + AP
Sbjct: 120 FIEERNYIHRNLRAANILVSDTLSC---KIADFGLARLIEDNE-YTAREGAKFPIKWTAP 175
Query: 214 EVL-AGGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRI 251
E + G + +DVWS G++L I+ G P+ G T +
Sbjct: 176 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV 215
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 117/259 (45%), Gaps = 31/259 (11%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLS 99
RE L ++LG GQFG + + + +V A K++ + + E +M L
Sbjct: 181 RESLKLEKKLGAGQFGEVWMATYNKHTKV-AVKTMKPGSMSV----EAFLAEANVMKTLQ 235
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVLY 157
H +V L AV E ++++ E A G L L+ + +++ Q+ + + +
Sbjct: 236 -HDKLVKLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAF 293
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPE 214
+ +HRDL+ NIL+ ++S K+ADFGLA VG+ F + APE
Sbjct: 294 IEQRNYIHRDLRAANILV---SASLVCKIADFGLA-----------RVGAKFPIKWTAPE 339
Query: 215 VLA-GGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIFDAVRTADLRFPSNPWDHISD 272
+ G + +DVWS G++L I+ G P+ G + + A+ R P ++ +
Sbjct: 340 AINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERG-YRMPRP--ENCPE 396
Query: 273 SAKDLVMGMLSTDPSQRLT 291
+++M P +R T
Sbjct: 397 ELYNIMMRCWKNRPEERPT 415
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
++LG GQFGV++ K+ G+ + K+ ++ D+ E ++M LS H +V
Sbjct: 21 KELGTGQFGVVKY--GKWRGQYDVAIKMIKEGSMSEDE---FIEEAKVMMNLS-HEKLVQ 74
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRL-EKFGRFSEAEARVLFMQLMQVVLYCHEIGVVH 165
L V + + ++ E A G L + L E RF + + + + + Y +H
Sbjct: 75 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLH 134
Query: 166 RDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPEVLA-GGYN 221
RDL N L+ + +K++DFGL+ Y+ + +VGS F + PEVL ++
Sbjct: 135 RDLAARNCLVNDQGV---VKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFS 190
Query: 222 QAADVWSAGVILYILLS-GMPPF 243
+D+W+ GV+++ + S G P+
Sbjct: 191 SKSDIWAFGVLMWEIYSLGKMPY 213
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 102/209 (48%), Gaps = 16/209 (7%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
++LG GQFGV++ K+ G+ + K+ ++ D+ E ++M LS H +V
Sbjct: 10 KELGTGQFGVVKY--GKWRGQYDVAIKMIKEGSMSEDE---FIEEAKVMMNLS-HEKLVQ 63
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRL-EKFGRFSEAEARVLFMQLMQVVLYCHEIGVVH 165
L V + + ++ E A G L + L E RF + + + + + Y +H
Sbjct: 64 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLH 123
Query: 166 RDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPEVLA-GGYN 221
RDL N L+ + +K++DFGL+ Y+ + +VGS F + PEVL ++
Sbjct: 124 RDLAARNCLVNDQGV---VKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFS 179
Query: 222 QAADVWSAGVILYILLS-GMPPFWGNTKS 249
+D+W+ GV+++ + S G P+ T S
Sbjct: 180 SKSDIWAFGVLMWEIYSLGKMPYERFTNS 208
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 16/203 (7%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
++LG GQFGV++ K+ G+ + K+ ++ D+ E ++M LS H +V
Sbjct: 15 KELGTGQFGVVKY--GKWRGQYDVAIKMIKEGSMSEDE---FIEEAKVMMNLS-HEKLVQ 68
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRL-EKFGRFSEAEARVLFMQLMQVVLYCHEIGVVH 165
L V + + ++ E A G L + L E RF + + + + + Y +H
Sbjct: 69 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLH 128
Query: 166 RDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPEVLA-GGYN 221
RDL N L+ + +K++DFGL+ Y+ + +VGS F + PEVL ++
Sbjct: 129 RDLAARNCLVNDQGV---VKVSDFGLSRYVLDDE-YTSSVGSKFPVRWSPPEVLMYSKFS 184
Query: 222 QAADVWSAGVILYILLS-GMPPF 243
+D+W+ GV+++ + S G P+
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPY 207
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 12/181 (6%)
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRL-EKFGRFSEAEARVLFM 149
E IM + S H N++ L+ V + ++ E G L L EK G FS + +
Sbjct: 96 EAGIMGQFSHH-NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLR 154
Query: 150 QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPG-QSLLGTVGSP 208
+ + Y + VHRDL NIL+ S+ K++DFGL+ +E ++ T G
Sbjct: 155 GIAAGMKYLANMNYVHRDLAARNILV---NSNLVCKVSDFGLSRVLEDDPEATYTTSGGK 211
Query: 209 F---YIAPEVLA-GGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIFDAVRTADLRFP 263
+ APE ++ + A+DVWS G++++ ++ G P+W + + A+ R P
Sbjct: 212 IPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDG-FRLP 270
Query: 264 S 264
+
Sbjct: 271 T 271
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 99/229 (43%), Gaps = 15/229 (6%)
Query: 45 LGQQLGWGQFGVIRVCS-DKFTGEVF--ACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH 101
L ++LG G FGV+R D +G+ A K + D L + E+ M L H
Sbjct: 16 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-H 74
Query: 102 PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARVLFMQLMQVVLYCHE 160
N++ L V + +V EL G L RL K G F +Q+ + + Y
Sbjct: 75 RNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 133
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQS---LLGTVGSPF-YIAPEVL 216
+HRDL N+LLAT+ +K+ DFGL + + PF + APE L
Sbjct: 134 KRFIHRDLAARNLLLATR---DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 190
Query: 217 AG-GYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFP 263
++ A+D W GV L+ + + G P+ G S+I + R P
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 239
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 101/221 (45%), Gaps = 20/221 (9%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEV-FACKSIAKDRLVTIDDERSVKLEIEIMTRL 98
RE L ++LG GQ G V + G A KS+ + + + E +M +L
Sbjct: 12 RETLKLVERLGAGQAG--EVWMGYYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQL 65
Query: 99 SGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFM--QLMQVVL 156
H +V L AV E ++++ E G L L+ ++L M Q+ + +
Sbjct: 66 Q-HQRLVRLYAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMA 123
Query: 157 YCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAP 213
+ E +HRDL+ NIL++ S K+ADFGLA IE + G+ F + AP
Sbjct: 124 FIEERNYIHRDLRAANILVSDTLSC---KIADFGLARLIEDAEX-TAREGAKFPIKWTAP 179
Query: 214 EVL-AGGYNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIF 252
E + G + +DVWS G++L I+ G P+ G T +
Sbjct: 180 EAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 115/283 (40%), Gaps = 31/283 (10%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL---VTIDDERSVKLEIEIMT 96
R R G+ LG G FG + + + A ++A L + + ++ E+++++
Sbjct: 38 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLS 97
Query: 97 RLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-KFGRFSEAEARVLFM------ 149
L H N+V+L ++ E C G+L + L K F ++ M
Sbjct: 98 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 157
Query: 150 -----------QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPG 198
Q+ + + + +HRDL NILL K+ DFGLA I+
Sbjct: 158 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT---HGRITKICDFGLARDIKND 214
Query: 199 QSLL--GTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFD 253
+ + G P ++APE + Y +DVWS G+ L+ L S G P+ G F
Sbjct: 215 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 274
Query: 254 AVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVL 296
+ R S +H D++ DP +R T +Q++
Sbjct: 275 KMIKEGFRMLSP--EHAPAEMYDIMKTCWDADPLKRPTFKQIV 315
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 99/229 (43%), Gaps = 15/229 (6%)
Query: 45 LGQQLGWGQFGVIRVCS-DKFTGEVF--ACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH 101
L ++LG G FGV+R D +G+ A K + D L + E+ M L H
Sbjct: 22 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-H 80
Query: 102 PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARVLFMQLMQVVLYCHE 160
N++ L V + +V EL G L RL K G F +Q+ + + Y
Sbjct: 81 RNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 139
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQS---LLGTVGSPF-YIAPEVL 216
+HRDL N+LLAT+ +K+ DFGL + + PF + APE L
Sbjct: 140 KRFIHRDLAARNLLLATR---DLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL 196
Query: 217 AG-GYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFP 263
++ A+D W GV L+ + + G P+ G S+I + R P
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 245
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 99/229 (43%), Gaps = 15/229 (6%)
Query: 45 LGQQLGWGQFGVIRVCS-DKFTGEVF--ACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH 101
L ++LG G FGV+R D +G+ A K + D L + E+ M L H
Sbjct: 22 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-H 80
Query: 102 PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARVLFMQLMQVVLYCHE 160
N++ L V + +V EL G L RL K G F +Q+ + + Y
Sbjct: 81 RNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 139
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQS---LLGTVGSPF-YIAPEVL 216
+HRDL N+LLAT+ +K+ DFGL + + PF + APE L
Sbjct: 140 KRFIHRDLAARNLLLATR---DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 196
Query: 217 AG-GYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFP 263
++ A+D W GV L+ + + G P+ G S+I + R P
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 245
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 31/283 (10%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL---VTIDDERSVKLEIEIMT 96
R R G+ LG G FG + + + A ++A L + + ++ E+++++
Sbjct: 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLS 81
Query: 97 RLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-KFGRFSEAEARVLFM------ 149
L H N+V+L ++ E C G+L + L K F ++ M
Sbjct: 82 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 141
Query: 150 -----------QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPG 198
Q+ + + + +HRDL NILL + K+ DFGLA I+
Sbjct: 142 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT---KICDFGLARDIKND 198
Query: 199 QSLL--GTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFD 253
+ + G P ++APE + Y +DVWS G+ L+ L S G P+ G F
Sbjct: 199 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 258
Query: 254 AVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVL 296
+ R S +H D++ DP +R T +Q++
Sbjct: 259 KMIKEGFRMLSP--EHAPAEMYDIMKTCWDADPLKRPTFKQIV 299
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 99/229 (43%), Gaps = 15/229 (6%)
Query: 45 LGQQLGWGQFGVIRVCS-DKFTGEVF--ACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH 101
L ++LG G FGV+R D +G+ A K + D L + E+ M L H
Sbjct: 16 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-H 74
Query: 102 PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARVLFMQLMQVVLYCHE 160
N++ L V + +V EL G L RL K G F +Q+ + + Y
Sbjct: 75 RNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 133
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQS---LLGTVGSPF-YIAPEVL 216
+HRDL N+LLAT+ +K+ DFGL + + PF + APE L
Sbjct: 134 KRFIHRDLAARNLLLATR---DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 190
Query: 217 AG-GYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFP 263
++ A+D W GV L+ + + G P+ G S+I + R P
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 239
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 31/283 (10%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL---VTIDDERSVKLEIEIMT 96
R R G+ LG G FG + + + A ++A L + + ++ E+++++
Sbjct: 45 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLS 104
Query: 97 RLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-KFGRFSEAEARVLFM------ 149
L H N+V+L ++ E C G+L + L K F ++ M
Sbjct: 105 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 164
Query: 150 -----------QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPG 198
Q+ + + + +HRDL NILL + K+ DFGLA I+
Sbjct: 165 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT---KICDFGLARDIKND 221
Query: 199 QSLL--GTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFD 253
+ + G P ++APE + Y +DVWS G+ L+ L S G P+ G F
Sbjct: 222 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 281
Query: 254 AVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVL 296
+ R S +H D++ DP +R T +Q++
Sbjct: 282 KMIKEGFRMLSP--EHAPAEMYDIMKTCWDADPLKRPTFKQIV 322
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 99/229 (43%), Gaps = 15/229 (6%)
Query: 45 LGQQLGWGQFGVIRVCS-DKFTGEVF--ACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH 101
L ++LG G FGV+R D +G+ A K + D L + E+ M L H
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-H 70
Query: 102 PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARVLFMQLMQVVLYCHE 160
N++ L V + +V EL G L RL K G F +Q+ + + Y
Sbjct: 71 RNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 129
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQS---LLGTVGSPF-YIAPEVL 216
+HRDL N+LLAT+ +K+ DFGL + + PF + APE L
Sbjct: 130 KRFIHRDLAARNLLLATR---DLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL 186
Query: 217 AG-GYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFP 263
++ A+D W GV L+ + + G P+ G S+I + R P
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 99/229 (43%), Gaps = 15/229 (6%)
Query: 45 LGQQLGWGQFGVIRVCS-DKFTGEVF--ACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH 101
L ++LG G FGV+R D +G+ A K + D L + E+ M L H
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-H 70
Query: 102 PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARVLFMQLMQVVLYCHE 160
N++ L V + +V EL G L RL K G F +Q+ + + Y
Sbjct: 71 RNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 129
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQS---LLGTVGSPF-YIAPEVL 216
+HRDL N+LLAT+ +K+ DFGL + + PF + APE L
Sbjct: 130 KRFIHRDLAARNLLLATR---DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 217 AG-GYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFP 263
++ A+D W GV L+ + + G P+ G S+I + R P
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 116/283 (40%), Gaps = 31/283 (10%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRL---VTIDDERSVKLEIEIMT 96
R R G+ LG G FG + + + A ++A L + + ++ E+++++
Sbjct: 40 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLS 99
Query: 97 RLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLE-KFGRFSEAEARVLFM------ 149
L H N+V+L ++ E C G+L + L K F ++ M
Sbjct: 100 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 159
Query: 150 -----------QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPG 198
Q+ + + + +HRDL NILL + K+ DFGLA I+
Sbjct: 160 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT---KICDFGLARDIKND 216
Query: 199 QSLL--GTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFD 253
+ + G P ++APE + Y +DVWS G+ L+ L S G P+ G F
Sbjct: 217 SNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 276
Query: 254 AVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVL 296
+ R S +H D++ DP +R T +Q++
Sbjct: 277 KMIKEGFRMLSP--EHAPAEMYDIMKTCWDADPLKRPTFKQIV 317
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 128/283 (45%), Gaps = 39/283 (13%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIE------ 93
RE+ L ++LG G FG++ + + ++ ++ + + T+++ S++ IE
Sbjct: 16 REKITLLRELGQGSFGMVYEGNAR---DIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF--------GRFSEAEAR 145
+M + H +VV L V +VMEL A G+L L GR
Sbjct: 73 VMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 131
Query: 146 VLFM--QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGL-------ATYIE 196
++ M ++ + Y + VHRDL N ++A + +K+ DFG+ A Y +
Sbjct: 132 MIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFT---VKIGDFGMTRDIYETAYYRK 188
Query: 197 PGQSLLGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDA 254
G+ LL ++APE L G + ++D+WS GV+L+ + S P+ G + ++
Sbjct: 189 GGKGLLPVR----WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF 244
Query: 255 VRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLD 297
V D + P D+ + DL+ +P R T ++++
Sbjct: 245 V--MDGGYLDQP-DNCPERVTDLMRMCWQFNPKMRPTFLEIVN 284
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 99/229 (43%), Gaps = 15/229 (6%)
Query: 45 LGQQLGWGQFGVIRVCS-DKFTGEVF--ACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH 101
L ++LG G FGV+R D +G+ A K + D L + E+ M L H
Sbjct: 12 LLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-H 70
Query: 102 PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF-GRFSEAEARVLFMQLMQVVLYCHE 160
N++ L V + +V EL G L RL K G F +Q+ + + Y
Sbjct: 71 RNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLES 129
Query: 161 IGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQS---LLGTVGSPF-YIAPEVL 216
+HRDL N+LLAT+ +K+ DFGL + + PF + APE L
Sbjct: 130 KRFIHRDLAARNLLLATR---DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 217 AG-GYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFP 263
++ A+D W GV L+ + + G P+ G S+I + R P
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 16/203 (7%)
Query: 47 QQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
++LG GQFGV++ K+ G+ + K+ ++ D+ E ++M LS H +V
Sbjct: 15 KELGTGQFGVVKY--GKWRGQYDVAIKMIKEGSMSEDE---FIEEAKVMMNLS-HEKLVQ 68
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRL-EKFGRFSEAEARVLFMQLMQVVLYCHEIGVVH 165
L V + + ++ E A G L + L E RF + + + + + Y +H
Sbjct: 69 LYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLH 128
Query: 166 RDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF---YIAPEVLA-GGYN 221
RDL N L+ + +K++DFGL+ Y+ + + GS F + PEVL ++
Sbjct: 129 RDLAARNCLVNDQGV---VKVSDFGLSRYVLDDE-YTSSRGSKFPVRWSPPEVLMYSKFS 184
Query: 222 QAADVWSAGVILYILLS-GMPPF 243
+D+W+ GV+++ + S G P+
Sbjct: 185 SKSDIWAFGVLMWEIYSLGKMPY 207
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 75/154 (48%), Gaps = 11/154 (7%)
Query: 42 RFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDER-SVKLEIEIMTRLSG 100
R+ LG+++G G FG I + +D GE A K L + + + +E +I + G
Sbjct: 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK------LECVKTKHPQLHIESKIYKMMQG 63
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGG--ELFHRLEKFGRFSEAEARVLFMQLMQVVLYC 158
+ ++ + DY +VMEL +LF+ + +FS +L Q++ + Y
Sbjct: 64 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYI 121
Query: 159 HEIGVVHRDLKPENILLATKASSSPIKLADFGLA 192
H +HRD+KP+N L+ + + + DFGLA
Sbjct: 122 HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 12/89 (13%)
Query: 159 HEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQ---SLLGTVGSPFYIAPEV 215
H+ + HRD K +N+LL + ++ LADFGLA EPG+ G VG+ Y+APEV
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAV---LADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEV 196
Query: 216 LAGGYN------QAADVWSAGVILYILLS 238
L G N D+++ G++L+ L+S
Sbjct: 197 LEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 11/155 (7%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDER-SVKLEIEIMTRLS 99
R+ LG+++G G FG I + +D GE A K L + + + +E +I +
Sbjct: 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK------LECVKTKHPQLHIESKIYKMMQ 60
Query: 100 GHPNVVDLKAVYEDEDYVHLVMELCAGG--ELFHRLEKFGRFSEAEARVLFMQLMQVVLY 157
G + ++ + DY +VMEL +LF+ + +FS +L Q++ + Y
Sbjct: 61 GGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEY 118
Query: 158 CHEIGVVHRDLKPENILLATKASSSPIKLADFGLA 192
H +HRD+KP+N L+ + + + DFGLA
Sbjct: 119 IHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 153
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 122/286 (42%), Gaps = 44/286 (15%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLV---------TIDDERSVKL 90
R VL ++LG G FG + F E + S KD+++ T+ + +
Sbjct: 14 RRDIVLKRELGEGAFGKV------FLAECYNL-SPTKDKMLVAVKALKDPTLAARKDFQR 66
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFG---------RFSE 141
E E++T L H ++V V D D + +V E G+L L G + +
Sbjct: 67 EAELLTNLQ-HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQ 125
Query: 142 AEARVLFMQLMQV-------VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLA-- 192
A+ + Q++ + ++Y VHRDL N L+ ++ +K+ DFG++
Sbjct: 126 AKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVG---ANLLVKIGDFGMSRD 182
Query: 193 TYIEPGQSLLGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILY-ILLSGMPPFWGNTKS 249
Y + G P ++ PE ++ + +DVWS GVIL+ I G P++ + +
Sbjct: 183 VYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT 242
Query: 250 RIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQV 295
+ + + R P D+++G +P QRL +++
Sbjct: 243 EVIECITQG--RVLERP-RVCPKEVYDVMLGCWQREPQQRLNIKEI 285
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 111/265 (41%), Gaps = 19/265 (7%)
Query: 48 QLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVDL 107
+LG G +GV+ +G++ A K I V +++ + +++I R P V
Sbjct: 41 ELGRGAYGVVEKXRHVPSGQIXAVKRIRA--TVNSQEQKRLLXDLDISXRTVDCPFTVTF 98
Query: 108 KAVYEDEDYVHLVMELCAGG-ELFHR--LEKFGRFSEAEARVLFMQLMQVVLYCH-EIGV 163
E V + EL + F++ ++K E + + +++ + + H ++ V
Sbjct: 99 YGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV 158
Query: 164 VHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVG-----SPFYIAPEVLAG 218
+HRD+KP N+L+ +K DFG++ Y+ + G +P I PE+
Sbjct: 159 IHRDVKPSNVLINALGQ---VKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQK 215
Query: 219 GYNQAADVWSAGVILYILLSGMPPF--WGNTKSRIFDAVRTADLRFPSNPWDHISDSAKD 276
GY+ +D+WS G+ L P+ WG ++ V P P D S D
Sbjct: 216 GYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPS---PQLPADKFSAEFVD 272
Query: 277 LVMGMLSTDPSQRLTARQVLDHSWM 301
L + +R T ++ H +
Sbjct: 273 FTSQCLKKNSKERPTYPELXQHPFF 297
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 10/156 (6%)
Query: 117 VHLVMELCAGGELF-HRLEKFGRFSEAEARVLFMQLMQVVLYCHEIGVVHRDLKPENILL 175
V LV +L G L H E GR + MQ+ + + Y ++ +VHRDL N+L+
Sbjct: 93 VQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLEDVRLVHRDLAARNVLV 152
Query: 176 ATKASSSPIKLADFGLATYIEPGQSLL----GTVGSPFYIAPEVLAGGYNQAADVWSAGV 231
S + +K+ DFGLA ++ ++ G V + +L + +DVWS GV
Sbjct: 153 ---KSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGV 209
Query: 232 ILYILLS-GMPPFWGNTKSRIFDAVRTADLRFPSNP 266
++ L++ G P+ G I D + + R P P
Sbjct: 210 TVWELMTFGAKPYDGIPAREIPDLLEKGE-RLPQPP 244
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 23/229 (10%)
Query: 42 RFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKL-EIEIMTRLSG 100
+F LG+++G G FG I + ++ T E A K L + + L E +I L G
Sbjct: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK------LENVKTKHPQLLYESKIYRILQG 61
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGG--ELFHRLEKFGRFSEAEARVLFMQLMQVVLYC 158
+ +++ + DY LVM+L +LF+ + + S +L Q++ V +
Sbjct: 62 GTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSR--KLSLKTVLMLADQMINRVEFV 119
Query: 159 HEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIE--------PGQSLLGTVGSPFY 210
H +HRD+KP+N L+ ++ + + DFGLA P + G+ Y
Sbjct: 120 HSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARY 179
Query: 211 IAPEVLAG-GYNQAADVWSAGVILYILLSGMPPFWG---NTKSRIFDAV 255
+ G ++ D+ S G +L L G P+ G TK + ++ +
Sbjct: 180 ASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKI 228
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 127/283 (44%), Gaps = 39/283 (13%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIE------ 93
RE+ L ++LG G FG++ + + ++ ++ + + T+++ S++ IE
Sbjct: 16 REKITLLRELGQGSFGMVYEGNAR---DIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF--------GRFSEAEAR 145
+M + H +VV L V +VMEL A G+L L GR
Sbjct: 73 VMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 131
Query: 146 VLFM--QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLAT-------YIE 196
++ M ++ + Y + VHRDL N ++A + +K+ DFG+ Y +
Sbjct: 132 MIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFT---VKIGDFGMTRDIYETDYYRK 188
Query: 197 PGQSLLGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDA 254
G+ LL ++APE L G + ++D+WS GV+L+ + S P+ G + ++
Sbjct: 189 GGKGLLPVR----WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF 244
Query: 255 VRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLD 297
V D + P D+ + DL+ +P R T ++++
Sbjct: 245 V--MDGGYLDQP-DNCPERVTDLMRMCWQFNPKMRPTFLEIVN 284
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 127/283 (44%), Gaps = 39/283 (13%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIE------ 93
RE+ L ++LG G FG++ + + ++ ++ + + T+++ S++ IE
Sbjct: 15 REKITLLRELGQGSFGMVYEGNAR---DIIKGEAETRVAVKTVNESASLRERIEFLNEAS 71
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF--------GRFSEAEAR 145
+M + H +VV L V +VMEL A G+L L GR
Sbjct: 72 VMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 130
Query: 146 VLFM--QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLAT-------YIE 196
++ M ++ + Y + VHRDL N ++A + +K+ DFG+ Y +
Sbjct: 131 MIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFT---VKIGDFGMTRDIYETDYYRK 187
Query: 197 PGQSLLGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDA 254
G+ LL ++APE L G + ++D+WS GV+L+ + S P+ G + ++
Sbjct: 188 GGKGLLPVR----WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF 243
Query: 255 VRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLD 297
V D + P D+ + DL+ +P R T ++++
Sbjct: 244 V--MDGGYLDQP-DNCPERVTDLMRMCWQFNPKMRPTFLEIVN 283
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 25/188 (13%)
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEAR----- 145
E + RL HPNVV L V + + ++ C+ G+L L S+ +
Sbjct: 62 EAMLRARLQ-HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 120
Query: 146 -----------VLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGL--A 192
L Q+ + Y VVH+DL N+L+ K + +K++D GL
Sbjct: 121 VKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLN---VKISDLGLFRE 177
Query: 193 TYIEPGQSLLGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGNTKS 249
Y LLG P ++APE ++ G ++ +D+WS GV+L+ + S G+ P+ G +
Sbjct: 178 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ 237
Query: 250 RIFDAVRT 257
+ + +R
Sbjct: 238 DVVEMIRN 245
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 128/283 (45%), Gaps = 39/283 (13%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIE------ 93
RE+ L ++LG G FG++ + + ++ ++ + + T+++ S++ IE
Sbjct: 16 REKITLLRELGQGSFGMVYEGNAR---DIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF--------GRFSEAEAR 145
+M + H +VV L V +VMEL A G+L L GR
Sbjct: 73 VMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 131
Query: 146 VLFM--QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYI-------E 196
++ M ++ + Y + VHRDL N ++A + +K+ DFG+ I +
Sbjct: 132 MIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFT---VKIGDFGMTRDIXETDXXRK 188
Query: 197 PGQSLLGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDA 254
G+ LL ++APE L G + ++D+WS GV+L+ + S P+ G + ++
Sbjct: 189 GGKGLLPVR----WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF 244
Query: 255 VRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLD 297
V D + P D+ + DL+ +P+ R T ++++
Sbjct: 245 V--MDGGYLDQP-DNCPERVTDLMRMCWQFNPNMRPTFLEIVN 284
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 25/188 (13%)
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEAR----- 145
E + RL HPNVV L V + + ++ C+ G+L L S+ +
Sbjct: 79 EAMLRARLQ-HPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 137
Query: 146 -----------VLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGL--A 192
L Q+ + Y VVH+DL N+L+ K + +K++D GL
Sbjct: 138 VKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLN---VKISDLGLFRE 194
Query: 193 TYIEPGQSLLGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWGNTKS 249
Y LLG P ++APE ++ G ++ +D+WS GV+L+ + S G+ P+ G +
Sbjct: 195 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ 254
Query: 250 RIFDAVRT 257
+ + +R
Sbjct: 255 DVVEMIRN 262
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 118/296 (39%), Gaps = 37/296 (12%)
Query: 41 ERFVLGQQLGWGQFGVIRVCSDKFTGEVF---ACKSIAKDRLVTIDDERSVKLEIEIMTR 97
++F LG+ LG G+FG +R K F A K + D + + D E ++ E M
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR-EAACMKE 81
Query: 98 LSGHPNVVDLKAVYEDED------YVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQL 151
HP+V L V +++ G+L H R E + L
Sbjct: 82 FD-HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDL-HAFLLASRIGENPFNLPLQTL 139
Query: 152 MQVVL-------YCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT 204
++ ++ Y +HRDL N +LA + + +ADFGL+ I G
Sbjct: 140 VRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMT---VCVADFGLSRKIYSGDYYRQG 196
Query: 205 VGSPF---YIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGNTKSRIFDAVRTAD 259
S ++A E LA Y +DVW+ GV ++ I+ G P+ G + I++ + +
Sbjct: 197 CASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGN 256
Query: 260 LRFPSNPWDHISDSAKDLVMGMLSTDPSQ-------RLTARQVLDHSWMGDGIQDP 308
R P + DL+ S DP Q R+ +L H + QDP
Sbjct: 257 -RLKQPP--ECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQDP 309
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 127/283 (44%), Gaps = 39/283 (13%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIE------ 93
RE+ L ++LG G FG++ + + ++ ++ + + T+++ S++ IE
Sbjct: 13 REKITLLRELGQGSFGMVYEGNAR---DIIKGEAETRVAVKTVNESASLRERIEFLNEAS 69
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF--------GRFSEAEAR 145
+M + H +VV L V +VMEL A G+L L GR
Sbjct: 70 VMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 128
Query: 146 VLFM--QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYI-------E 196
++ M ++ + Y + VHRDL N ++A + +K+ DFG+ I +
Sbjct: 129 MIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFT---VKIGDFGMTRDIXETDXXRK 185
Query: 197 PGQSLLGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDA 254
G+ LL ++APE L G + ++D+WS GV+L+ + S P+ G + ++
Sbjct: 186 GGKGLLPVR----WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF 241
Query: 255 VRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLD 297
V D + P D+ + DL+ +P R T ++++
Sbjct: 242 V--MDGGYLDQP-DNCPERVTDLMRMCWQFNPKMRPTFLEIVN 281
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 127/283 (44%), Gaps = 39/283 (13%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIE------ 93
RE+ L ++LG G FG++ + + ++ ++ + + T+++ S++ IE
Sbjct: 16 REKITLLRELGQGSFGMVYEGNAR---DIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF--------GRFSEAEAR 145
+M + H +VV L V +VMEL A G+L L GR
Sbjct: 73 VMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 131
Query: 146 VLFM--QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYI-------E 196
++ M ++ + Y + VHRDL N ++A + +K+ DFG+ I +
Sbjct: 132 MIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFT---VKIGDFGMTRDIXETDXXRK 188
Query: 197 PGQSLLGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDA 254
G+ LL ++APE L G + ++D+WS GV+L+ + S P+ G + ++
Sbjct: 189 GGKGLLPVR----WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF 244
Query: 255 VRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLD 297
V D + P D+ + DL+ +P R T ++++
Sbjct: 245 V--MDGGYLDQP-DNCPERVTDLMRMCWQFNPKMRPTFLEIVN 284
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 128/283 (45%), Gaps = 39/283 (13%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIE------ 93
RE+ L ++LG G FG++ + + ++ ++ + + T+++ S++ IE
Sbjct: 16 REKITLLRELGQGSFGMVYEGNAR---DIIKGEAETRVAVKTVNESASLRERIEFLNEAS 72
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF--------GRFSEAEAR 145
+M + H +VV L V +VMEL A G+L L GR
Sbjct: 73 VMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 131
Query: 146 VLFM--QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLAT-------YIE 196
++ M ++ + Y + VHR+L N ++A + +K+ DFG+ Y +
Sbjct: 132 MIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFT---VKIGDFGMTRDIYETDYYRK 188
Query: 197 PGQSLLGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDA 254
G+ LL ++APE L G + ++D+WS GV+L+ + S P+ G + ++
Sbjct: 189 GGKGLLPVR----WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF 244
Query: 255 VRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLD 297
V D + P D+ + DL+ +P+ R T ++++
Sbjct: 245 V--MDGGYLDQP-DNCPERVTDLMRMCWQFNPNMRPTFLEIVN 284
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 128/283 (45%), Gaps = 39/283 (13%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIE------ 93
RE+ L ++LG G FG++ + + ++ ++ + + T+++ S++ IE
Sbjct: 17 REKITLLRELGQGSFGMVYEGNAR---DIIKGEAETRVAVKTVNESASLRERIEFLNEAS 73
Query: 94 IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKF--------GRFSEAEAR 145
+M + H +VV L V +VMEL A G+L L GR
Sbjct: 74 VMKGFTCH-HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQE 132
Query: 146 VLFM--QLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLAT-------YIE 196
++ M ++ + Y + VHR+L N ++A + +K+ DFG+ Y +
Sbjct: 133 MIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFT---VKIGDFGMTRDIYETDYYRK 189
Query: 197 PGQSLLGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDA 254
G+ LL ++APE L G + ++D+WS GV+L+ + S P+ G + ++
Sbjct: 190 GGKGLLPVR----WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF 245
Query: 255 VRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLD 297
V D + P D+ + DL+ +P+ R T ++++
Sbjct: 246 V--MDGGYLDQP-DNCPERVTDLMRMCWQFNPNMRPTFLEIVN 285
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 20/216 (9%)
Query: 47 QQLGWGQFGVIR-----VCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH 101
++LG G FG ++ + T V K+ A D + DE + E +M +L +
Sbjct: 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND--PALKDE--LLAEANVMQQLD-N 429
Query: 102 PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEI 161
P +V + + E E ++ LVME+ G L L++ + L Q+ + Y E
Sbjct: 430 PYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES 488
Query: 162 GVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLG--TVGS-PF-YIAPEVLA 217
VHRDL N+LL T+ + K++DFGL+ + ++ T G P + APE +
Sbjct: 489 NFVHRDLAARNVLLVTQHYA---KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 545
Query: 218 -GGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRI 251
++ +DVWS GV+++ S G P+ G S +
Sbjct: 546 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 581
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 20/216 (9%)
Query: 47 QQLGWGQFGVIR-----VCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGH 101
++LG G FG ++ + T V K+ A D + DE + E +M +L +
Sbjct: 376 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEAND--PALKDE--LLAEANVMQQLD-N 430
Query: 102 PNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVLYCHEI 161
P +V + + E E ++ LVME+ G L L++ + L Q+ + Y E
Sbjct: 431 PYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES 489
Query: 162 GVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLG--TVGS-PF-YIAPEVLA 217
VHRDL N+LL T+ + K++DFGL+ + ++ T G P + APE +
Sbjct: 490 NFVHRDLAARNVLLVTQHYA---KISDFGLSKALRADENYYKAQTHGKWPVKWYAPECIN 546
Query: 218 -GGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRI 251
++ +DVWS GV+++ S G P+ G S +
Sbjct: 547 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 582
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 98/212 (46%), Gaps = 21/212 (9%)
Query: 38 NLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTR 97
N++E +L Q +G G+FG + + + G A K I D ++ E +MT+
Sbjct: 10 NMKELKLL-QTIGKGEFGDVML--GDYRGNKVAVKCIKNDATA-----QAFLAEASVMTQ 61
Query: 98 LSGHPNVVDLKAV-YEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQL--MQV 154
L H N+V L V E++ +++V E A G L L GR +L L +
Sbjct: 62 LR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 120
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF-YIAP 213
+ Y VHRDL N+L++ + K++DFGL Q T P + AP
Sbjct: 121 MEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLTKEASSTQD---TGKLPVKWTAP 174
Query: 214 EVL-AGGYNQAADVWSAGVILYILLS-GMPPF 243
E L ++ +DVWS G++L+ + S G P+
Sbjct: 175 EALREAAFSTKSDVWSFGILLWEIYSFGRVPY 206
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 18/206 (8%)
Query: 48 QLGWGQFGVIRVCSDKF-TGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+LG G FG +R + ++ + K D E ++ E +IM +L +P +V
Sbjct: 17 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMR-EAQIMHQLD-NPYIVR 74
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVL---YCHEIGV 163
L V + E + LVME+ GG L L G+ E + L QV + Y E
Sbjct: 75 LIGVCQAEA-LMLVMEMAGGGPLHKFL--VGKREEIPVSNVAELLHQVSMGMKYLEEKNF 131
Query: 164 VHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGS---PF-YIAPEVLA-G 218
VHRDL N+LL + + K++DFGL+ + S + P + APE +
Sbjct: 132 VHRDLAARNVLLVNRHYA---KISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR 188
Query: 219 GYNQAADVWSAGVILYILLS-GMPPF 243
++ +DVWS GV ++ LS G P+
Sbjct: 189 KFSSRSDVWSYGVTMWEALSYGQKPY 214
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 11/154 (7%)
Query: 42 RFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDER-SVKLEIEIMTRLSG 100
++ LG+++G G FG I + ++ +GE A K L + + + +E + + G
Sbjct: 10 KYRLGRKIGSGSFGDIYLGANIASGEEVAIK------LECVKTKHPQLHIESKFYKMMQG 63
Query: 101 HPNVVDLKAVYEDEDYVHLVMELCAGG--ELFHRLEKFGRFSEAEARVLFMQLMQVVLYC 158
+ +K + DY +VMEL +LF+ + +FS +L Q++ + Y
Sbjct: 64 GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYI 121
Query: 159 HEIGVVHRDLKPENILLATKASSSPIKLADFGLA 192
H +HRD+KP+N L+ + + + DFGLA
Sbjct: 122 HSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA 155
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 120/270 (44%), Gaps = 27/270 (10%)
Query: 38 NLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTR 97
N++E +L Q +G G+FG + + + G A K I D ++ E +MT+
Sbjct: 191 NMKELKLL-QTIGKGEFGDVML--GDYRGNKVAVKCIKNDATA-----QAFLAEASVMTQ 242
Query: 98 LSGHPNVVDLKAV-YEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQL--MQV 154
L H N+V L V E++ +++V E A G L L GR +L L +
Sbjct: 243 LR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 301
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF-YIAP 213
+ Y VHRDL N+L++ + K++DFGL + S T P + AP
Sbjct: 302 MEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAP 355
Query: 214 EVL-AGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTADLRFPSNPWDHIS 271
E L ++ +DVWS G++L+ + S G P+ + + D V + + + D
Sbjct: 356 EALREKKFSTKSDVWSFGILLWEIYSFGRVPY---PRIPLKDVVPRVEKGYKMDAPDGCP 412
Query: 272 DSAKDLVMGMLSTDPSQR---LTARQVLDH 298
+ D++ D + R L R+ L+H
Sbjct: 413 PAVYDVMKNCWHLDAATRPTFLQLREQLEH 442
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 107/256 (41%), Gaps = 42/256 (16%)
Query: 33 TNQISNLRE----RFVLGQQLGWGQFGVIRVCSDKFTGEV-----------FACKSIAKD 77
T+ IS+L+E L + LG G FG + + G+V A K++ +
Sbjct: 19 TSSISDLKEVPRKNITLIRGLGHGAFGEV------YEGQVSGMPNDPSPLQVAVKTLPE- 71
Query: 78 RLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFG 137
+ + DE +E I+++L+ H N+V V +++EL AGG+L L +
Sbjct: 72 -VCSEQDELDFLMEALIISKLN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 129
Query: 138 RFSEAEARVLFMQLMQVVL-------YCHEIGVVHRDLKPENILLATKASSSPIKLADFG 190
+ + + L+ V Y E +HRD+ N LL K+ DFG
Sbjct: 130 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 189
Query: 191 L------ATYIEPGQSLLGTVGSPFYIAPEV-LAGGYNQAADVWSAGVILYILLS-GMPP 242
+ A+Y G + V ++ PE + G + D WS GV+L+ + S G P
Sbjct: 190 MARDIYRASYYRKGGCAMLPVK---WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 246
Query: 243 FWGNTKSRIFDAVRTA 258
+ + + + V +
Sbjct: 247 YPSKSNQEVLEFVTSG 262
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 107/256 (41%), Gaps = 42/256 (16%)
Query: 33 TNQISNLRE----RFVLGQQLGWGQFGVIRVCSDKFTGEV-----------FACKSIAKD 77
T+ IS+L+E L + LG G FG + + G+V A K++ +
Sbjct: 33 TSSISDLKEVPRKNITLIRGLGHGAFGEV------YEGQVSGMPNDPSPLQVAVKTLPE- 85
Query: 78 RLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFG 137
+ + DE +E I+++L+ H N+V V +++EL AGG+L L +
Sbjct: 86 -VCSEQDELDFLMEALIISKLN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 143
Query: 138 RFSEAEARVLFMQLMQVVL-------YCHEIGVVHRDLKPENILLATKASSSPIKLADFG 190
+ + + L+ V Y E +HRD+ N LL K+ DFG
Sbjct: 144 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 203
Query: 191 L------ATYIEPGQSLLGTVGSPFYIAPEV-LAGGYNQAADVWSAGVILYILLS-GMPP 242
+ A+Y G + V ++ PE + G + D WS GV+L+ + S G P
Sbjct: 204 MARDIYRASYYRKGGCAMLPVK---WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 260
Query: 243 FWGNTKSRIFDAVRTA 258
+ + + + V +
Sbjct: 261 YPSKSNQEVLEFVTSG 276
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 106/256 (41%), Gaps = 42/256 (16%)
Query: 33 TNQISNLRE----RFVLGQQLGWGQFGVIRVCSDKFTGEV-----------FACKSIAKD 77
T+ IS+L+E L + LG G FG + + G+V A K++ +
Sbjct: 33 TSSISDLKEVPRKNITLIRGLGHGAFGEV------YEGQVSGMPNDPSPLQVAVKTLPE- 85
Query: 78 RLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFG 137
+ + DE +E I+++ + H N+V V ++MEL AGG+L L +
Sbjct: 86 -VCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETR 143
Query: 138 RFSEAEARVLFMQLMQVVL-------YCHEIGVVHRDLKPENILLATKASSSPIKLADFG 190
+ + + L+ V Y E +HRD+ N LL K+ DFG
Sbjct: 144 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 203
Query: 191 L------ATYIEPGQSLLGTVGSPFYIAPEV-LAGGYNQAADVWSAGVILYILLS-GMPP 242
+ A+Y G + V ++ PE + G + D WS GV+L+ + S G P
Sbjct: 204 MARDIYRASYYRKGGCAMLPVK---WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 260
Query: 243 FWGNTKSRIFDAVRTA 258
+ + + + V +
Sbjct: 261 YPSKSNQEVLEFVTSG 276
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 12/89 (13%)
Query: 159 HEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQS---LLGTVGSPFYIAPEV 215
H+ + HRD+K +N+LL ++ +ADFGLA E G+S G VG+ Y+APEV
Sbjct: 148 HKPAISHRDIKSKNVLLKNNLTAC---IADFGLALKFEAGKSAGDTHGQVGTRRYMAPEV 204
Query: 216 LAGGYN------QAADVWSAGVILYILLS 238
L G N D+++ G++L+ L S
Sbjct: 205 LEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 18/206 (8%)
Query: 48 QLGWGQFGVIRVCSDKF-TGEVFACKSIAKDRLVTIDDERSVKLEIEIMTRLSGHPNVVD 106
+LG G FG +R + ++ + K D E ++ E +IM +L +P +V
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMR-EAQIMHQLD-NPYIVR 400
Query: 107 LKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQLMQVVL---YCHEIGV 163
L V + E + LVME+ GG L L G+ E + L QV + Y E
Sbjct: 401 LIGVCQAEALM-LVMEMAGGGPLHKFL--VGKREEIPVSNVAELLHQVSMGMKYLEEKNF 457
Query: 164 VHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGS---PF-YIAPEVLA-G 218
VHR+L N+LL + + K++DFGL+ + S + P + APE +
Sbjct: 458 VHRNLAARNVLLVNRHYA---KISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR 514
Query: 219 GYNQAADVWSAGVILYILLS-GMPPF 243
++ +DVWS GV ++ LS G P+
Sbjct: 515 KFSSRSDVWSYGVTMWEALSYGQKPY 540
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 106/256 (41%), Gaps = 42/256 (16%)
Query: 33 TNQISNLRE----RFVLGQQLGWGQFGVIRVCSDKFTGEV-----------FACKSIAKD 77
T+ IS+L+E L + LG G FG + + G+V A K++ +
Sbjct: 18 TSSISDLKEVPRKNITLIRGLGHGAFGEV------YEGQVSGMPNDPSPLQVAVKTLPE- 70
Query: 78 RLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFG 137
+ + DE +E I+++ + H N+V V ++MEL AGG+L L +
Sbjct: 71 -VCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETR 128
Query: 138 RFSEAEARVLFMQLMQVVL-------YCHEIGVVHRDLKPENILLATKASSSPIKLADFG 190
+ + + L+ V Y E +HRD+ N LL K+ DFG
Sbjct: 129 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 188
Query: 191 L------ATYIEPGQSLLGTVGSPFYIAPEV-LAGGYNQAADVWSAGVILYILLS-GMPP 242
+ A+Y G + V ++ PE + G + D WS GV+L+ + S G P
Sbjct: 189 MARDIYRASYYRKGGCAMLPVK---WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 245
Query: 243 FWGNTKSRIFDAVRTA 258
+ + + + V +
Sbjct: 246 YPSKSNQEVLEFVTSG 261
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 99/212 (46%), Gaps = 21/212 (9%)
Query: 38 NLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTR 97
N++E +L Q +G G+FG + + + G A K I D ++ E +MT+
Sbjct: 19 NMKELKLL-QTIGKGEFGDVML--GDYRGNKVAVKCIKNDATA-----QAFLAEASVMTQ 70
Query: 98 LSGHPNVVDLKAV-YEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQL--MQV 154
L H N+V L V E++ +++V E A G L L GR +L L +
Sbjct: 71 LR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 129
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF-YIAP 213
+ Y VHRDL N+L++ + K++DFGL + S T P + AP
Sbjct: 130 MEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAP 183
Query: 214 EVL-AGGYNQAADVWSAGVILYILLS-GMPPF 243
E L ++ +DVWS G++L+ + S G P+
Sbjct: 184 EALREKKFSTKSDVWSFGILLWEIYSFGRVPY 215
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQ 150
E +M +L +P +V + + E E ++ LVME+ G L L++ + L Q
Sbjct: 76 EANVMQQLD-NPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 133
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLL-----GTV 205
+ + Y E VHRDL N+LL T+ + K++DFGL+ + ++ G
Sbjct: 134 VSMGMKYLEESNFVHRDLAARNVLLVTQHYA---KISDFGLSKALRADENYYKAQTHGKW 190
Query: 206 GSPFYIAPEVL-AGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRI 251
+Y APE + ++ +DVWS GV+++ S G P+ G S +
Sbjct: 191 PVKWY-APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 237
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQ 150
E +M +L +P +V + + E E ++ LVME+ G L L++ + L Q
Sbjct: 78 EANVMQQLD-NPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 135
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLL-----GTV 205
+ + Y E VHRDL N+LL T+ + K++DFGL+ + ++ G
Sbjct: 136 VSMGMKYLEESNFVHRDLAARNVLLVTQHYA---KISDFGLSKALRADENYYKAQTHGKW 192
Query: 206 GSPFYIAPEVL-AGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRI 251
+Y APE + ++ +DVWS GV+++ S G P+ G S +
Sbjct: 193 PVKWY-APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 239
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQ 150
E +M +L +P +V + + E E ++ LVME+ G L L++ + L Q
Sbjct: 78 EANVMQQLD-NPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 135
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLL-----GTV 205
+ + Y E VHRDL N+LL T+ + K++DFGL+ + ++ G
Sbjct: 136 VSMGMKYLEESNFVHRDLAARNVLLVTQHYA---KISDFGLSKALRADENYYKAQTHGKW 192
Query: 206 GSPFYIAPEVL-AGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRI 251
+Y APE + ++ +DVWS GV+++ S G P+ G S +
Sbjct: 193 PVKWY-APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 239
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 8/116 (6%)
Query: 149 MQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEP--GQSLLGTVG 206
+Q+ + + Y E G+VHR+L N+LL S S +++ADFG+A + P Q L
Sbjct: 140 VQIAKGMYYLEEHGMVHRNLAARNVLL---KSPSQVQVADFGVADLLPPDDKQLLYSEAK 196
Query: 207 SPF-YIAPEVLA-GGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTAD 259
+P ++A E + G Y +DVWS GV ++ L++ G P+ G + + D + +
Sbjct: 197 TPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGE 252
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQ 150
E +M +L +P +V + + E E ++ LVME+ G L L++ + L Q
Sbjct: 56 EANVMQQLD-NPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 113
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLL-----GTV 205
+ + Y E VHRDL N+LL T+ + K++DFGL+ + ++ G
Sbjct: 114 VSMGMKYLEESNFVHRDLAARNVLLVTQHYA---KISDFGLSKALRADENYYKAQTHGKW 170
Query: 206 GSPFYIAPEVL-AGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRI 251
+Y APE + ++ +DVWS GV+++ S G P+ G S +
Sbjct: 171 PVKWY-APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 217
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQ 150
E +M +L +P +V + + E E ++ LVME+ G L L++ + L Q
Sbjct: 62 EANVMQQLD-NPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 119
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLL-----GTV 205
+ + Y E VHRDL N+LL T+ + K++DFGL+ + ++ G
Sbjct: 120 VSMGMKYLEESNFVHRDLAARNVLLVTQHYA---KISDFGLSKALRADENYYKAQTHGKW 176
Query: 206 GSPFYIAPEVL-AGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRI 251
+Y APE + ++ +DVWS GV+++ S G P+ G S +
Sbjct: 177 PVKWY-APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 223
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 99/212 (46%), Gaps = 21/212 (9%)
Query: 38 NLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEIMTR 97
N++E +L Q +G G+FG + + + G A K I D ++ E +MT+
Sbjct: 4 NMKELKLL-QTIGKGEFGDVML--GDYRGNKVAVKCIKNDATA-----QAFLAEASVMTQ 55
Query: 98 LSGHPNVVDLKAV-YEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQL--MQV 154
L H N+V L V E++ +++V E A G L L GR +L L +
Sbjct: 56 LR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEA 114
Query: 155 VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGTVGSPF-YIAP 213
+ Y VHRDL N+L++ + K++DFGL + S T P + AP
Sbjct: 115 MEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAP 168
Query: 214 EVL-AGGYNQAADVWSAGVILYILLS-GMPPF 243
E L ++ +DVWS G++L+ + S G P+
Sbjct: 169 EALREKKFSTKSDVWSFGILLWEIYSFGRVPY 200
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQ 150
E +M +L +P +V + + E E ++ LVME+ G L L++ + L Q
Sbjct: 58 EANVMQQLD-NPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 115
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLL-----GTV 205
+ + Y E VHRDL N+LL T+ + K++DFGL+ + ++ G
Sbjct: 116 VSMGMKYLEESNFVHRDLAARNVLLVTQHYA---KISDFGLSKALRADENYYKAQTHGKW 172
Query: 206 GSPFYIAPEVL-AGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRI 251
+Y APE + ++ +DVWS GV+++ S G P+ G S +
Sbjct: 173 PVKWY-APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 219
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQ 150
E +M +L +P +V + + E E ++ LVME+ G L L++ + L Q
Sbjct: 68 EANVMQQLD-NPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 125
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLL-----GTV 205
+ + Y E VHRDL N+LL T+ + K++DFGL+ + ++ G
Sbjct: 126 VSMGMKYLEESNFVHRDLAARNVLLVTQHYA---KISDFGLSKALRADENYYKAQTHGKW 182
Query: 206 GSPFYIAPEVL-AGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRI 251
+Y APE + ++ +DVWS GV+++ S G P+ G S +
Sbjct: 183 PVKWY-APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 229
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 13/168 (7%)
Query: 91 EIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVLFMQ 150
E +M +L +P +V + + E E ++ LVME+ G L L++ + L Q
Sbjct: 62 EANVMQQLD-NPYIVRMIGICEAESWM-LVMEMAELGPLNKYLQQNRHVKDKNIIELVHQ 119
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLL-----GTV 205
+ + Y E VHRDL N+LL T+ + K++DFGL+ + ++ G
Sbjct: 120 VSMGMKYLEESNFVHRDLAARNVLLVTQHYA---KISDFGLSKALRADENXYKAQTHGKW 176
Query: 206 GSPFYIAPEVL-AGGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRI 251
+Y APE + ++ +DVWS GV+++ S G P+ G S +
Sbjct: 177 PVKWY-APECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV 223
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 63/116 (54%), Gaps = 8/116 (6%)
Query: 149 MQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEP--GQSLLGTVG 206
+Q+ + + Y E G+VHR+L N+LL S S +++ADFG+A + P Q L
Sbjct: 122 VQIAKGMYYLEEHGMVHRNLAARNVLL---KSPSQVQVADFGVADLLPPDDKQLLYSEAK 178
Query: 207 SPF-YIAPEVLA-GGYNQAADVWSAGVILYILLS-GMPPFWGNTKSRIFDAVRTAD 259
+P ++A E + G Y +DVWS GV ++ L++ G P+ G + + D + +
Sbjct: 179 TPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGE 234
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 32/179 (17%)
Query: 148 FMQLMQVVLYCHEIG----------VVHRDLKPENILLATKASSSPIKLADFGLA--TYI 195
F+ L ++ Y ++ +HRDL NILL+ K + +K+ DFGLA Y
Sbjct: 187 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK---NVVKICDFGLARDIYK 243
Query: 196 EPGQSLLGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWG-----NT 247
+P G P ++APE + Y +DVWS GV+L+ + S G P+ G
Sbjct: 244 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 303
Query: 248 KSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQ 306
R+ + R +R P D+ + ++ +PSQR T ++++H +G+ +Q
Sbjct: 304 CRRLKEGTR---MRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH--LGNLLQ 353
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKF-TGEVFACKSIAKDRL---VTIDDERSVKLEIEIM 95
R+R LG+ LG G FG + + +D F + C+++A L T + R++ E++I+
Sbjct: 19 RDRLKLGKPLGRGAFGQV-IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL 77
Query: 96 TRLSGHPNVVD-LKAVYEDEDYVHLVMELCAGGEL 129
+ H NVV+ L A + + +++E C G L
Sbjct: 78 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 112
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 32/179 (17%)
Query: 148 FMQLMQVVLYCHEIG----------VVHRDLKPENILLATKASSSPIKLADFGLA--TYI 195
F+ L ++ Y ++ +HRDL NILL+ K + +K+ DFGLA Y
Sbjct: 189 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK---NVVKICDFGLARDIYK 245
Query: 196 EPGQSLLGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWG-----NT 247
+P G P ++APE + Y +DVWS GV+L+ + S G P+ G
Sbjct: 246 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 305
Query: 248 KSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQ 306
R+ + R +R P D+ + ++ +PSQR T ++++H +G+ +Q
Sbjct: 306 CRRLKEGTR---MRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH--LGNLLQ 355
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKF-TGEVFACKSIAKDRL---VTIDDERSVKLEIEIM 95
R+R LG+ LG G FG + + +D F + C+++A L T + R++ E++I+
Sbjct: 21 RDRLKLGKPLGRGAFGQV-IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL 79
Query: 96 TRLSGHPNVVD-LKAVYEDEDYVHLVMELCAGGEL 129
+ H NVV+ L A + + +++E C G L
Sbjct: 80 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 114
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 32/179 (17%)
Query: 148 FMQLMQVVLYCHEIG----------VVHRDLKPENILLATKASSSPIKLADFGLA--TYI 195
F+ L ++ Y ++ +HRDL NILL+ K + +K+ DFGLA Y
Sbjct: 196 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK---NVVKICDFGLARDIYK 252
Query: 196 EPGQSLLGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWG-----NT 247
+P G P ++APE + Y +DVWS GV+L+ + S G P+ G
Sbjct: 253 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 312
Query: 248 KSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQ 306
R+ + R +R P D+ + ++ +PSQR T ++++H +G+ +Q
Sbjct: 313 CRRLKEGTR---MRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH--LGNLLQ 362
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKF-TGEVFACKSIAKDRL---VTIDDERSVKLEIEIM 95
R+R LG+ LG G FG + + +D F + C+++A L T + R++ E++I+
Sbjct: 28 RDRLKLGKPLGRGAFGQV-IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL 86
Query: 96 TRLSGHPNVVD-LKAVYEDEDYVHLVMELCAGGEL 129
+ H NVV+ L A + + +++E C G L
Sbjct: 87 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 32/179 (17%)
Query: 148 FMQLMQVVLYCHEIG----------VVHRDLKPENILLATKASSSPIKLADFGLA--TYI 195
F+ L ++ Y ++ +HRDL NILL+ K + +K+ DFGLA Y
Sbjct: 194 FLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK---NVVKICDFGLARDIYK 250
Query: 196 EPGQSLLGTVGSPF-YIAPE-VLAGGYNQAADVWSAGVILYILLS-GMPPFWG-----NT 247
+P G P ++APE + Y +DVWS GV+L+ + S G P+ G
Sbjct: 251 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEF 310
Query: 248 KSRIFDAVRTADLRFPSNPWDHISDSAKDLVMGMLSTDPSQRLTARQVLDHSWMGDGIQ 306
R+ + R +R P D+ + ++ +PSQR T ++++H +G+ +Q
Sbjct: 311 CRRLKEGTR---MRAP----DYTTPEMYQTMLDCWHGEPSQRPTFSELVEH--LGNLLQ 360
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKF-TGEVFACKSIAKDRL---VTIDDERSVKLEIEIM 95
R+R LG+ LG G FG + + +D F + C+++A L T + R++ E++I+
Sbjct: 26 RDRLKLGKPLGRGAFGQV-IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKIL 84
Query: 96 TRLSGHPNVVD-LKAVYEDEDYVHLVMELCAGGEL 129
+ H NVV+ L A + + +++E C G L
Sbjct: 85 IHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 106/256 (41%), Gaps = 42/256 (16%)
Query: 33 TNQISNLRE----RFVLGQQLGWGQFGVIRVCSDKFTGEV-----------FACKSIAKD 77
T+ IS+L+E L + LG G FG + + G+V A K++ +
Sbjct: 19 TSSISDLKEVPRKNITLIRGLGHGAFGEV------YEGQVSGMPNDPSPLQVAVKTLPE- 71
Query: 78 RLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFG 137
+ + DE +E I+++ + H N+V V +++EL AGG+L L +
Sbjct: 72 -VCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 129
Query: 138 RFSEAEARVLFMQLMQVVL-------YCHEIGVVHRDLKPENILLATKASSSPIKLADFG 190
+ + + L+ V Y E +HRD+ N LL K+ DFG
Sbjct: 130 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 189
Query: 191 L------ATYIEPGQSLLGTVGSPFYIAPEV-LAGGYNQAADVWSAGVILYILLS-GMPP 242
+ A+Y G + V ++ PE + G + D WS GV+L+ + S G P
Sbjct: 190 MAQDIYRASYYRKGGCAMLPVK---WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 246
Query: 243 FWGNTKSRIFDAVRTA 258
+ + + + V +
Sbjct: 247 YPSKSNQEVLEFVTSG 262
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 75/161 (46%), Gaps = 14/161 (8%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACK-SIAKDRLVTIDDERSVKLEIEIMTRLSGH 101
F +G+++G G FG +R+ + +T E A K K R + LE +LS
Sbjct: 6 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSR------APQLHLEYRFYKQLSAT 59
Query: 102 PNVVDLKAVYEDEDYVHLVMELCAGG--ELFHRLEKFGRFSEAEARVLFMQLMQVVLYCH 159
V + Y +V+EL +LF ++ F+ ++ +QL+ + Y H
Sbjct: 60 EGVPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCDR--TFTLKTVLMIAIQLITRMEYVH 117
Query: 160 EIGVVHRDLKPENILLATKASS--SPIKLADFGLAT-YIEP 197
+++RD+KPEN L+ + I + DFGLA YI+P
Sbjct: 118 TKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDP 158
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 106/256 (41%), Gaps = 42/256 (16%)
Query: 33 TNQISNLRE----RFVLGQQLGWGQFGVIRVCSDKFTGEV-----------FACKSIAKD 77
T+ IS+L+E L + LG G FG + + G+V A K++ +
Sbjct: 19 TSSISDLKEVPRKNITLIRGLGHGAFGEV------YEGQVSGMPNDPSPLQVAVKTLPE- 71
Query: 78 RLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFG 137
+ + DE +E I+++ + H N+V V +++EL AGG+L L +
Sbjct: 72 -VCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 129
Query: 138 RFSEAEARVLFMQLMQVVL-------YCHEIGVVHRDLKPENILLATKASSSPIKLADFG 190
+ + + L+ V Y E +HRD+ N LL K+ DFG
Sbjct: 130 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 189
Query: 191 L------ATYIEPGQSLLGTVGSPFYIAPEV-LAGGYNQAADVWSAGVILYILLS-GMPP 242
+ A+Y G + V ++ PE + G + D WS GV+L+ + S G P
Sbjct: 190 MARDIYRASYYRKGGCAMLPVK---WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 246
Query: 243 FWGNTKSRIFDAVRTA 258
+ + + + V +
Sbjct: 247 YPSKSNQEVLEFVTSG 262
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 106/256 (41%), Gaps = 42/256 (16%)
Query: 33 TNQISNLRE----RFVLGQQLGWGQFGVIRVCSDKFTGEV-----------FACKSIAKD 77
T+ IS+L+E L + LG G FG + + G+V A K++ +
Sbjct: 25 TSSISDLKEVPRKNITLIRGLGHGAFGEV------YEGQVSGMPNDPSPLQVAVKTLPE- 77
Query: 78 RLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFG 137
+ + DE +E I+++ + H N+V V +++EL AGG+L L +
Sbjct: 78 -VCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 135
Query: 138 RFSEAEARVLFMQLMQVVL-------YCHEIGVVHRDLKPENILLATKASSSPIKLADFG 190
+ + + L+ V Y E +HRD+ N LL K+ DFG
Sbjct: 136 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 195
Query: 191 L------ATYIEPGQSLLGTVGSPFYIAPEV-LAGGYNQAADVWSAGVILYILLS-GMPP 242
+ A+Y G + V ++ PE + G + D WS GV+L+ + S G P
Sbjct: 196 MARDIYRASYYRKGGCAMLPVK---WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 252
Query: 243 FWGNTKSRIFDAVRTA 258
+ + + + V +
Sbjct: 253 YPSKSNQEVLEFVTSG 268
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 106/256 (41%), Gaps = 42/256 (16%)
Query: 33 TNQISNLRE----RFVLGQQLGWGQFGVIRVCSDKFTGEV-----------FACKSIAKD 77
T+ IS+L+E L + LG G FG + + G+V A K++ +
Sbjct: 10 TSSISDLKEVPRKNITLIRGLGHGAFGEV------YEGQVSGMPNDPSPLQVAVKTLPE- 62
Query: 78 RLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFG 137
+ + DE +E I+++ + H N+V V +++EL AGG+L L +
Sbjct: 63 -VCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 120
Query: 138 RFSEAEARVLFMQLMQVVL-------YCHEIGVVHRDLKPENILLATKASSSPIKLADFG 190
+ + + L+ V Y E +HRD+ N LL K+ DFG
Sbjct: 121 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 180
Query: 191 L------ATYIEPGQSLLGTVGSPFYIAPEV-LAGGYNQAADVWSAGVILYILLS-GMPP 242
+ A+Y G + V ++ PE + G + D WS GV+L+ + S G P
Sbjct: 181 MARDIYRASYYRKGGCAMLPVK---WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 237
Query: 243 FWGNTKSRIFDAVRTA 258
+ + + + V +
Sbjct: 238 YPSKSNQEVLEFVTSG 253
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 104/253 (41%), Gaps = 42/253 (16%)
Query: 33 TNQISNLRE----RFVLGQQLGWGQFGVIRVCSDKFTGEV-----------FACKSIAKD 77
T+ IS+L+E L + LG G FG + + G+V A K++ +
Sbjct: 45 TSSISDLKEVPRKNITLIRGLGHGAFGEV------YEGQVSGMPNDPSPLQVAVKTLPE- 97
Query: 78 RLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFG 137
+ + DE +E I+++ + H N+V V +++EL AGG+L L +
Sbjct: 98 -VCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 155
Query: 138 RFSEAEARVLFMQLMQVVL-------YCHEIGVVHRDLKPENILLATKASSSPIKLADFG 190
+ + + L+ V Y E +HRD+ N LL K+ DFG
Sbjct: 156 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 215
Query: 191 L------ATYIEPGQSLLGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILYILLS-GMPP 242
+ A+Y G + V ++ PE G + D WS GV+L+ + S G P
Sbjct: 216 MARDIYRASYYRKGGCAMLPVK---WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 272
Query: 243 FWGNTKSRIFDAV 255
+ + + + V
Sbjct: 273 YPSKSNQEVLEFV 285
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 106/256 (41%), Gaps = 42/256 (16%)
Query: 33 TNQISNLRE----RFVLGQQLGWGQFGVIRVCSDKFTGEV-----------FACKSIAKD 77
T+ IS+L+E L + LG G FG + + G+V A K++ +
Sbjct: 35 TSSISDLKEVPRKNITLIRGLGHGAFGEV------YEGQVSGMPNDPSPLQVAVKTLPE- 87
Query: 78 RLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFG 137
+ + DE +E I+++ + H N+V V +++EL AGG+L L +
Sbjct: 88 -VCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 145
Query: 138 RFSEAEARVLFMQLMQVVL-------YCHEIGVVHRDLKPENILLATKASSSPIKLADFG 190
+ + + L+ V Y E +HRD+ N LL K+ DFG
Sbjct: 146 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 205
Query: 191 L------ATYIEPGQSLLGTVGSPFYIAPEV-LAGGYNQAADVWSAGVILYILLS-GMPP 242
+ A+Y G + V ++ PE + G + D WS GV+L+ + S G P
Sbjct: 206 MARDIYRASYYRKGGCAMLPVK---WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 262
Query: 243 FWGNTKSRIFDAVRTA 258
+ + + + V +
Sbjct: 263 YPSKSNQEVLEFVTSG 278
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 106/256 (41%), Gaps = 42/256 (16%)
Query: 33 TNQISNLRE----RFVLGQQLGWGQFGVIRVCSDKFTGEV-----------FACKSIAKD 77
T+ IS+L+E L + LG G FG + + G+V A K++ +
Sbjct: 18 TSSISDLKEVPRKNITLIRGLGHGAFGEV------YEGQVSGMPNDPSPLQVAVKTLPE- 70
Query: 78 RLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFG 137
+ + DE +E I+++ + H N+V V +++EL AGG+L L +
Sbjct: 71 -VCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 128
Query: 138 RFSEAEARVLFMQLMQVVL-------YCHEIGVVHRDLKPENILLATKASSSPIKLADFG 190
+ + + L+ V Y E +HRD+ N LL K+ DFG
Sbjct: 129 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 188
Query: 191 L------ATYIEPGQSLLGTVGSPFYIAPEV-LAGGYNQAADVWSAGVILYILLS-GMPP 242
+ A+Y G + V ++ PE + G + D WS GV+L+ + S G P
Sbjct: 189 MARDIYRASYYRKGGCAMLPVK---WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 245
Query: 243 FWGNTKSRIFDAVRTA 258
+ + + + V +
Sbjct: 246 YPSKSNQEVLEFVTSG 261
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 105/256 (41%), Gaps = 42/256 (16%)
Query: 33 TNQISNLRE----RFVLGQQLGWGQFGVIRVCSDKFTGEV-----------FACKSIAKD 77
T+ IS+L+E L + LG G FG + + G+V A K++ +
Sbjct: 33 TSSISDLKEVPRKNITLIRGLGHGAFGEV------YEGQVSGMPNDPSPLQVAVKTLPE- 85
Query: 78 RLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFG 137
+ + DE +E I+++ + H N+V V +++EL AGG+L L +
Sbjct: 86 -VYSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 143
Query: 138 RFSEAEARVLFMQLMQVVL-------YCHEIGVVHRDLKPENILLATKASSSPIKLADFG 190
+ + + L+ V Y E +HRD+ N LL K+ DFG
Sbjct: 144 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 203
Query: 191 L------ATYIEPGQSLLGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILYILLS-GMPP 242
+ A+Y G + V ++ PE G + D WS GV+L+ + S G P
Sbjct: 204 MARDIYRASYYRKGGCAMLPVK---WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 260
Query: 243 FWGNTKSRIFDAVRTA 258
+ + + + V +
Sbjct: 261 YPSKSNQEVLEFVTSG 276
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 35/222 (15%)
Query: 37 SNLRERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI-M 95
S + VL + +G G+FG V K+ GE A K + + +ERS E EI
Sbjct: 5 STIARTIVLQESIGKGRFG--EVWRGKWRGEEVAVK------IFSSREERSWFREAEIYQ 56
Query: 96 TRLSGHPNVVDLKAVYEDED----YVHLVMELCAGGELFHRLEKFG-------RFSEAEA 144
T + H N++ A ++ + LV + G LF L ++ + + + A
Sbjct: 57 TVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTA 116
Query: 145 RVLFMQLMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT 204
L M++V + + HRDLK +NIL+ + +AD GLA + +
Sbjct: 117 SGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC---IADLGLAVRHDSATDTIDI 173
Query: 205 -----VGSPFYIAPEVLAGGYN-------QAADVWSAGVILY 234
VG+ Y+APEVL N + AD+++ G++ +
Sbjct: 174 APNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 215
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 105/256 (41%), Gaps = 42/256 (16%)
Query: 33 TNQISNLRE----RFVLGQQLGWGQFGVIRVCSDKFTGEV-----------FACKSIAKD 77
T+ IS+L+E L + LG G FG + + G+V A K++ +
Sbjct: 59 TSSISDLKEVPRKNITLIRGLGHGAFGEV------YEGQVSGMPNDPSPLQVAVKTLPE- 111
Query: 78 RLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFG 137
+ + DE +E I+++ + H N+V V +++EL AGG+L L +
Sbjct: 112 -VCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 169
Query: 138 RFSEAEARVLFMQLMQVVL-------YCHEIGVVHRDLKPENILLATKASSSPIKLADFG 190
+ + + L+ V Y E +HRD+ N LL K+ DFG
Sbjct: 170 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 229
Query: 191 LAT------YIEPGQSLLGTVGSPFYIAPEV-LAGGYNQAADVWSAGVILYILLS-GMPP 242
+A Y G + V ++ PE + G + D WS GV+L+ + S G P
Sbjct: 230 MARDIYRAGYYRKGGCAMLPVK---WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 286
Query: 243 FWGNTKSRIFDAVRTA 258
+ + + + V +
Sbjct: 287 YPSKSNQEVLEFVTSG 302
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 105/256 (41%), Gaps = 42/256 (16%)
Query: 33 TNQISNLRE----RFVLGQQLGWGQFGVIRVCSDKFTGEV-----------FACKSIAKD 77
T+ IS+L+E L + LG G FG + + G+V A K++ +
Sbjct: 36 TSSISDLKEVPRKNITLIRGLGHGAFGEV------YEGQVSGMPNDPSPLQVAVKTLPE- 88
Query: 78 RLVTIDDERSVKLEIEIMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFG 137
+ + DE +E I+++ + H N+V V +++EL AGG+L L +
Sbjct: 89 -VCSEQDELDFLMEALIISKFN-HQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETR 146
Query: 138 RFSEAEARVLFMQLMQVVL-------YCHEIGVVHRDLKPENILLATKASSSPIKLADFG 190
+ + + L+ V Y E +HRD+ N LL K+ DFG
Sbjct: 147 PRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 206
Query: 191 LAT------YIEPGQSLLGTVGSPFYIAPEV-LAGGYNQAADVWSAGVILYILLS-GMPP 242
+A Y G + V ++ PE + G + D WS GV+L+ + S G P
Sbjct: 207 MARDIYRAGYYRKGGCAMLPVK---WMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP 263
Query: 243 FWGNTKSRIFDAVRTA 258
+ + + + V +
Sbjct: 264 YPSKSNQEVLEFVTSG 279
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 35/216 (16%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI-MTRLSGH 101
VL + +G G+FG V K+ GE A K + + +ERS E EI T + H
Sbjct: 44 IVLQESIGKGRFG--EVWRGKWRGEEVAVK------IFSSREERSWFREAEIYQTVMLRH 95
Query: 102 PNVVDLKAVYEDED----YVHLVMELCAGGELFHRLEKFG-------RFSEAEARVLFMQ 150
N++ A ++ + LV + G LF L ++ + + + A L
Sbjct: 96 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHL 155
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT-----V 205
M++V + + HRDLK +NIL+ + +AD GLA + + V
Sbjct: 156 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC---IADLGLAVRHDSATDTIDIAPNHRV 212
Query: 206 GSPFYIAPEVLAGGYN-------QAADVWSAGVILY 234
G+ Y+APEVL N + AD+++ G++ +
Sbjct: 213 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 248
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 35/216 (16%)
Query: 43 FVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDRLVTIDDERSVKLEIEI-MTRLSGH 101
VL + +G G+FG V K+ GE A K + + +ERS E EI T + H
Sbjct: 31 IVLQESIGKGRFG--EVWRGKWRGEEVAVK------IFSSREERSWFREAEIYQTVMLRH 82
Query: 102 PNVVDLKAVYEDED----YVHLVMELCAGGELFHRLEKFG-------RFSEAEARVLFMQ 150
N++ A ++ + LV + G LF L ++ + + + A L
Sbjct: 83 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHL 142
Query: 151 LMQVVLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLATYIEPGQSLLGT-----V 205
M++V + + HRDLK +NIL+ + +AD GLA + + V
Sbjct: 143 HMEIVGTQGKPAIAHRDLKSKNILVKKNGTCC---IADLGLAVRHDSATDTIDIAPNHRV 199
Query: 206 GSPFYIAPEVLAGGYN-------QAADVWSAGVILY 234
G+ Y+APEVL N + AD+++ G++ +
Sbjct: 200 GTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 235
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 110/253 (43%), Gaps = 50/253 (19%)
Query: 40 RERFVLGQQLGWGQFGVIRVCSDKFTGEVFACKSIAKDR------LVTIDDERSVKLEIE 93
RE+ + ++LG G FG++ + G K + KD + T+++ S++ IE
Sbjct: 24 REKITMSRELGQGSFGMV------YEG---VAKGVVKDEPETRVAIKTVNEAASMRERIE 74
Query: 94 ------IMTRLSGHPNVVDLKAVYEDEDYVHLVMELCAGGELFHRLEKFGRFSEAEARVL 147
+M + H +VV L V ++MEL G+L L R + A VL
Sbjct: 75 FLNEASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSL-RPAMANNPVL 132
Query: 148 ----FMQLMQV-------VLYCHEIGVVHRDLKPENILLATKASSSPIKLADFGLAT--- 193
+++Q+ + Y + VHRDL N ++A + +K+ DFG+
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT---VKIGDFGMTRDIY 189
Query: 194 ----YIEPGQSLLGTVGSPFYIAPEVLAGG-YNQAADVWSAGVILY-ILLSGMPPFWGNT 247
Y + G+ LL +++PE L G + +DVWS GV+L+ I P+ G +
Sbjct: 190 ETDYYRKGGKGLLPVR----WMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS 245
Query: 248 KSRIFDAVRTADL 260
++ V L
Sbjct: 246 NEQVLRFVMEGGL 258
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.134 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,212,505
Number of Sequences: 62578
Number of extensions: 536846
Number of successful extensions: 4544
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 748
Number of HSP's successfully gapped in prelim test: 352
Number of HSP's that attempted gapping in prelim test: 1317
Number of HSP's gapped (non-prelim): 1267
length of query: 468
length of database: 14,973,337
effective HSP length: 102
effective length of query: 366
effective length of database: 8,590,381
effective search space: 3144079446
effective search space used: 3144079446
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)