Query 012206
Match_columns 468
No_of_seqs 278 out of 1561
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 04:51:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012206.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012206hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1csh_A Citrate synthase; lyase 100.0 1E-121 5E-126 960.6 45.6 432 35-466 2-434 (435)
2 3hwk_A Methylcitrate synthase; 100.0 1E-102 5E-107 809.7 36.9 373 51-460 25-406 (414)
3 3msu_A Citrate synthase; helix 100.0 1E-101 4E-106 805.5 34.5 362 64-459 46-422 (427)
4 2h12_A Citrate synthase; acido 100.0 3E-101 9E-106 807.0 34.9 373 52-460 38-426 (436)
5 2ibp_A Citrate synthase; disul 100.0 2E-101 8E-106 802.3 33.4 376 58-459 9-398 (409)
6 3l96_A Citrate synthase; quate 100.0 4E-102 1E-106 809.5 22.8 372 52-460 31-416 (426)
7 2c6x_A Citrate synthase 1; tri 100.0 1.5E-99 5E-104 778.4 36.3 354 73-459 2-358 (363)
8 2p2w_A Citrate synthase; trans 100.0 9E-100 3E-104 781.3 34.6 351 71-459 1-352 (367)
9 3tqg_A 2-methylcitrate synthas 100.0 5E-100 2E-104 783.9 32.6 354 65-459 3-363 (375)
10 3o8j_A 2-methylcitrate synthas 100.0 9E-100 3E-104 787.6 33.4 365 60-459 18-392 (404)
11 1o7x_A Citrate synthase; lyase 100.0 1.9E-98 7E-103 773.9 35.4 353 74-460 6-367 (377)
12 1vgm_A 378AA long hypothetical 100.0 2.5E-98 9E-103 773.4 35.1 353 74-460 7-368 (378)
13 1iom_A Citrate synthase; open 100.0 5.6E-98 2E-102 770.5 37.1 355 74-459 5-365 (377)
14 1aj8_A Citrate synthase; hyper 100.0 4E-98 1E-102 770.2 35.7 353 74-459 3-359 (371)
15 2ifc_A Citrate synthase; oxalo 100.0 3.9E-98 1E-102 773.5 34.5 356 72-460 7-374 (385)
16 1a59_A Citrate synthase; cold- 100.0 5.6E-98 2E-102 771.5 35.1 359 72-459 5-372 (378)
17 1vgp_A 373AA long hypothetical 100.0 5.6E-98 2E-102 769.9 33.5 351 73-459 4-362 (373)
18 3tqg_A 2-methylcitrate synthas 44.2 58 0.002 33.0 8.1 62 118-181 153-218 (375)
19 4ay7_A Methylcobalamin\: coenz 35.2 34 0.0012 33.7 4.7 44 327-370 302-346 (348)
20 3o8j_A 2-methylcitrate synthas 34.9 1.1E+02 0.0037 31.4 8.4 61 118-180 182-246 (404)
21 1a59_A Citrate synthase; cold- 34.3 99 0.0034 31.2 8.0 59 119-179 154-216 (378)
22 1aj8_A Citrate synthase; hyper 33.5 1E+02 0.0036 31.0 8.0 60 119-180 151-214 (371)
23 1iom_A Citrate synthase; open 33.1 1.1E+02 0.0037 31.0 8.0 60 119-180 152-215 (377)
24 2ifc_A Citrate synthase; oxalo 32.9 1.2E+02 0.0042 30.7 8.4 60 119-180 156-219 (385)
25 3u5c_P 40S ribosomal protein S 32.9 17 0.00058 32.1 1.7 22 95-126 15-36 (142)
26 3j20_T 30S ribosomal protein S 32.5 16 0.00056 31.8 1.5 22 95-126 6-27 (132)
27 1vgp_A 373AA long hypothetical 31.3 1.3E+02 0.0045 30.3 8.3 60 119-180 148-211 (373)
28 2ibp_A Citrate synthase; disul 31.2 1.3E+02 0.0046 30.7 8.4 60 119-180 182-245 (409)
29 1vgm_A 378AA long hypothetical 30.9 1.4E+02 0.0048 30.2 8.4 60 119-180 152-215 (378)
30 3hwk_A Methylcitrate synthase; 30.0 1.3E+02 0.0044 31.0 8.0 60 119-180 196-259 (414)
31 2xzm_S RPS15E; ribosome, trans 27.4 21 0.00073 31.5 1.4 13 95-107 11-23 (144)
32 2c6x_A Citrate synthase 1; tri 23.6 1.7E+02 0.0059 29.4 7.5 60 119-180 145-208 (363)
33 2qsr_A Transcription-repair co 22.3 74 0.0025 28.6 4.0 51 123-181 28-82 (173)
34 3iz6_R 40S ribosomal protein S 21.3 20 0.00068 32.0 0.0 14 95-108 24-37 (154)
35 2eja_A URO-D, UPD, uroporphyri 20.8 94 0.0032 30.2 4.8 44 327-370 287-335 (338)
No 1
>1csh_A Citrate synthase; lyase(OXO-acid); HET: AMX; 1.65A {Gallus gallus} SCOP: a.103.1.1 PDB: 1amz_A* 1csi_A* 1csr_A* 1css_A* 1al6_A* 6csc_A* 2cts_A* 3enj_A 1cts_A 4cts_A 1csc_A* 2csc_A* 3csc_A* 4csc_A* 5csc_A 5cts_A* 6cts_A* 5csc_B
Probab=100.00 E-value=1.3e-121 Score=960.63 Aligned_cols=432 Identities=61% Similarity=1.086 Sum_probs=414.8
Q ss_pred hhHHHHHHhhCHHHHHHHHHHHHhhCCccccceehhccccccccccceeeecceecCCCCeeecCCCHHHHhhhCCCCCC
Q 012206 35 LDLHSQLKEMIPEQQERLKKVKSELGKAQLGNITVDMVIGGMRGMTGLLWETSLLDPDEGIRFRGLSIPECQKLLPAAKP 114 (468)
Q Consensus 35 ~~l~~~~~~~ip~~~~~~~~~~~~~g~~~~g~~t~~~~~~Glrg~~~~~t~iS~iD~~~Gi~yRGy~I~eL~~~~p~~~~ 114 (468)
++|||+++++||.+++.+|+||++||++++|++|+||+++||+|+++++|+||+|||++||+||||+|+||++++|++++
T Consensus 2 ~~lk~~~~~~i~~~~~~~~~~~~~~g~~~~~~~t~~~~~~Gl~g~~~~~t~Is~id~~~Gl~YRGy~I~dLa~~~~~~~~ 81 (435)
T 1csh_A 2 TNLKDVLASLIPKEQARIKTFRQQHGNTAVGQITVDMSYGGMRGMKGLIYETSVLDPDEGIRFRGFSIPECQKLLPKAGG 81 (435)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCHHHHHTTTTTCCCCCCCSEEEETTTEEEETTEEHHHHHHHSCBCTT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccCcCCCeeeeeeeeEEcCCCCeeECCccHHHHHhhCccccc
Confidence 36999999999999999999999999999999999999999999999999999999999999999999999999998878
Q ss_pred CCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHhhCCCcHHHHHHHHcCCCCCChHHHHHHHHHHhcccchhhHHhhhccC
Q 012206 115 DGEPLPEGLLWLLLTGKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIH 194 (468)
Q Consensus 115 ~~~~~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~~lp~~v~~~i~~lP~~~hPM~~l~~avsaL~~~s~f~~~y~~~~~ 194 (468)
+++++||||+||||+|+|||++|+++|+++|.+++.+|++|.++|+++|+++|||++|+++|++|+++++|+++|+++.+
T Consensus 82 ~~~~~feev~yLLl~G~LPt~~el~~f~~~l~~~~~lp~~v~~~i~~~p~~~hPM~~l~~~v~aL~~~~~f~~~~~~~~~ 161 (435)
T 1csh_A 82 GEEPLPEGLFWLLVTGQIPTPEQVSWVSKEWAKRAALPSHVVTMLDNFPTNLHPMSQLSAAITALNSESNFARAYAEGIN 161 (435)
T ss_dssp CCSBCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHSCTTSCHHHHHHHHHHHGGGGCHHHHHHHTTCC
T ss_pred CCcCCHHHHHHHHHcCCCCCHHHHHHHHHHHHHccCCCHHHHHHHHhCCccCChHHHHHHHHHHHhhcccccccccccCC
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999999988776
Q ss_pred CCCCCCchHHHHHHHHHhhHHHHHHHHHHHhcCC-cccCCCCCCCHHHHHHhhhCCCChHHHHHHHHHHHHhcCCCCCCC
Q 012206 195 KSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDG-KIIPKDDSLDYGGNFSHMLGFDDPKMLELMRLYVTIHSDHEGGNV 273 (468)
Q Consensus 195 k~~~~e~~~e~al~liA~~p~iaa~iyr~~~~~~-~~~~p~~~l~~~~nf~~ml~~~~~~~~~~l~~~LvL~ADHeg~n~ 273 (468)
+.+||++.++++++|||++|+|+|++||++++++ .+++|++++||++||++||++|++.++++||++|||||||||+|+
T Consensus 162 ~~~~~~~~~~~a~~LiAk~p~iaa~~yr~~~~~~~~~i~p~~~ls~a~nfl~ml~~p~~~~~~~ld~~LiLhADHeg~N~ 241 (435)
T 1csh_A 162 RTKYWEFVYEDAMDLIAKLPCVAAKIYRNLYRAGSSIGAIDSKLDWSHNFTNMLGYTDPQFTELMRLYLTIHSDHEGGNV 241 (435)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCCCCCTTSCHHHHHHHHHTCCCHHHHHHHHHHHHHTSCCCSCSH
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCccCCCCCCCHHHHHHHHhcCCChHHHHHHHHHHHHccCCCCCch
Confidence 6778999999999999999999999999998765 578999999999999999999999999999999999999976999
Q ss_pred chhHHHHhhccCCChHHHHHHHhhccccccccccHHHHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCCCcccCcCCCCC
Q 012206 274 SAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVL 353 (468)
Q Consensus 274 St~aarvvaSt~sd~y~avaAgl~aL~GplHGGA~e~v~~~l~~i~~~ig~~~s~~~~~~~v~~~l~~g~~IpGfGH~vy 353 (468)
||||+|+++||++|+|+|++|||++|+||+||||||+|++||.++.++||++.+++++++||++.+++|++|||||||||
T Consensus 242 STftaRvvaSt~ad~ysavaagi~aL~GplHGGAne~v~~ml~~i~~~ig~~~~~~~~~~~v~~~l~~g~~i~GfGHrVy 321 (435)
T 1csh_A 242 SAHTSHLVGSALSDPYLSFAAAMNGLAGPLHGLANQEVLLWLSQLQKDLGADASDEKLRDYIWNTLNSGRVVPGYGHAVL 321 (435)
T ss_dssp HHHHHHHHHTTTCCHHHHHHHHHHHHTSTTTTTHHHHHHHHHHHHHHHTTSSCCHHHHHHHHHHHHHTTCCCTTBCCSSC
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHhccCCcccChHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCCceecCCcccc
Confidence 99999999999999999999999999999999999999999999988888766789999999999999999999999999
Q ss_pred CCCCccHHHHHHHHHhhCCCChHHHHHHHHHHhhhhhHHhcCCCCCCCCchhhHHHHHHhccCCCccccchhhhhhhhhh
Q 012206 354 RKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSL 433 (468)
Q Consensus 354 r~~DPRa~~L~~~a~~~~~~d~~~~la~~ie~~~~~~~~e~~k~k~l~pNvD~~sg~l~~~lGlp~~~~~t~lF~vsR~~ 433 (468)
|+.|||+++|+++++++.+++++++++.+||+++++++.++++.|++|||||||+|+++++||||+.++||+||++||++
T Consensus 322 k~~DPRa~~L~~~a~~l~~~~~~~~~a~~le~~a~~~l~~~~~~k~l~pNVDf~sg~i~~~lGipp~~~ft~lFaisR~~ 401 (435)
T 1csh_A 322 RKTDPRYTCQREFALKHLPSDPMFKLVAQLYKIVPNVLLEQGKAKNPWPNVDAHSGVLLQYYGMTEMNYYTVLFGVSRAL 401 (435)
T ss_dssp CSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHTCCSCCSBCTHHHHHHHHHHTTCCCGGGHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHcCCChhhcccchhhhhhhH
Confidence 99999999999999999888999999999999999988888999999999999999999999995459999999999999
Q ss_pred hHHHHHHHHHHcCCCcccCCccchhHHHHHhhh
Q 012206 434 GICSQLIWDRALGLPLERPKSVTLDWIEKNCKK 466 (468)
Q Consensus 434 GwlAH~ieq~~~~~pi~RP~s~~~~~~~~~~~~ 466 (468)
||+||++||+.++.||+||+|+|+++++++|+.
T Consensus 402 Gw~AH~~Eq~~~~~~I~RP~~~y~~~~~~~~~~ 434 (435)
T 1csh_A 402 GVLAQLIWSRALGFPLERPKSMSTAGLEKLSAG 434 (435)
T ss_dssp HHHHHHHHHHHTTCCCCCCCCCCHHHHHHHHCC
T ss_pred HHHHHHHHHHhcCCCCcCcHHHhhHHHHHHhcC
Confidence 999999999999988999999999999999863
No 2
>3hwk_A Methylcitrate synthase; niaid, ssgcid, structural genomics, seattle structural genomics center for infectious disease, tubercluosis; 2.30A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.5e-102 Score=809.73 Aligned_cols=373 Identities=21% Similarity=0.292 Sum_probs=329.6
Q ss_pred HHHHHHHhhCCccccceehhc---cccccccccceeeecceecCCCC-eeecCCCHHHHhhhCCCCCCCCCCCHHHHHHH
Q 012206 51 RLKKVKSELGKAQLGNITVDM---VIGGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWL 126 (468)
Q Consensus 51 ~~~~~~~~~g~~~~g~~t~~~---~~~Glrg~~~~~t~iS~iD~~~G-i~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~L 126 (468)
.++..|++||.+++++.|+|+ +.+||+|+.+++|+||+||+++| ++||||+|+||++++ +||||+||
T Consensus 25 ~~~~~~~~~~~~~~~~~~~d~~~~~~~Gl~gv~~~~t~Is~idg~~G~L~YRGy~I~dLa~~~---------~fEevayL 95 (414)
T 3hwk_A 25 PLAAARSVAATKSMTAPTVDERPDIKKGLAGVVVDTTAISKVVPQTNSLTYRGYPVQDLAARC---------SFEQVAFL 95 (414)
T ss_dssp -----------------------CCCGGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHHC---------CHHHHHHH
T ss_pred eHHHHHHhhCCcccCCccccCCCCCCCCCCCCeeeeeeceEEeCCCCEEEECCeEHHHHHhcC---------CHHHHHHH
Confidence 467889999999999999999 88999999999999999999999 699999999999986 59999999
Q ss_pred HHhCCCCCHHHHHHHHHHHHhhCCCcHHHHHHHHcCCCCCChHHHHHHHHHHhcccchhhHHhhhccCCCCCCCchHHHH
Q 012206 127 LLTGKVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDS 206 (468)
Q Consensus 127 Ll~G~lPt~~ql~~f~~~L~~~~~lp~~v~~~i~~lP~~~hPM~~l~~avsaL~~~s~f~~~y~~~~~k~~~~e~~~e~a 206 (468)
||+|+|||++|+++|+++|.+++.||+++.++|++||+++|||++|+++|++|+++++.. .+ |+..++++
T Consensus 96 Ll~G~LPt~~el~~f~~~l~~~~~lp~~v~~~i~~~p~~~hPM~~l~~~vsaL~~~~~~~---------~~-~~~~~~~a 165 (414)
T 3hwk_A 96 LWRGELPTDAELALFSQRERASRRVDRSMLSLLAKLPDNCHPMDVVRTAISYLGAEDPDE---------DD-AAANRAKA 165 (414)
T ss_dssp HHHSSCCCHHHHHHHHHHHHHTCCCCHHHHHHHHHSCTTSCHHHHHHHHHHHHHHTCTTT---------TC-GGGHHHHH
T ss_pred HHcCCCCCHHHHHHHHHHHHHccCCCHHHHHHHHhCCCCCCHHHHHHHHHHHHhhcCCcc---------cC-HHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998764321 12 89999999
Q ss_pred HHHHHhhHHHHHHHHHHHhcCCcccCCCCCCCHHHHHHhhhCC--CChHHHHHHHHHHHHhcCCCCCCCchhHHHHhhcc
Q 012206 207 LNLIARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASA 284 (468)
Q Consensus 207 l~liA~~p~iaa~iyr~~~~~~~~~~p~~~l~~~~nf~~ml~~--~~~~~~~~l~~~LvL~ADHeg~n~St~aarvvaSt 284 (468)
++|||++|+|+|++||++.+ ..+++|++++||++||++||++ +++.++++||++|||||||| +|+||||+|+++||
T Consensus 166 ~rLiAk~pti~a~~yr~~~g-~~~~~p~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~LiLhADHe-~NaST~taRvvaSt 243 (414)
T 3hwk_A 166 MRMMAVLPTIVAIDMRRRRG-LPPIAPHSGLGYAQNFLHMCFGEVPETAVVSAFEQSMILYAEHG-FNASTFAARVVTST 243 (414)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-CCCCCCCTTSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCS-SCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhCC-CCCCCCCccccHHHHHHHHhcCCCCCHHHHHHHHHHHhhccCCC-CChHHHHHHHHHhc
Confidence 99999999999999998754 3588999999999999999976 78899999999999999999 89999999999999
Q ss_pred CCChHHHHHHHhhccccccccccHHHHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCCCcccCcCCCCCCCCCccHHHHH
Q 012206 285 LSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQR 364 (468)
Q Consensus 285 ~sd~y~avaAgl~aL~GplHGGA~e~v~~~l~~i~~~ig~~~s~~~~~~~v~~~l~~g~~IpGfGH~vyr~~DPRa~~L~ 364 (468)
++|+|+|++|||++|+||+||||||+|++||+++ + +++++++||++.+++|++||||||||||+.|||+++|+
T Consensus 244 ~ad~ysavaagi~aL~GplHGGAne~v~~ml~ei----~---~~~~~~~~v~~~l~~~~~I~GFGHrVyk~~DPRa~~L~ 316 (414)
T 3hwk_A 244 QSDIYSAVTGAIGALKGRLHGGANEAVMHDMIEI----G---DPANAREWLRAKLARKEKIMGFGHRVYRHGDSRVPTMK 316 (414)
T ss_dssp TCCHHHHHHHHHHHHTSTTTTHHHHHHHHHHHHH----C---SGGGHHHHHHHHHHTTCCCTTBCCSSCSSCCTTHHHHH
T ss_pred CCCHHHHHHHHHHHhcCCccCChHHHHHHHHHHh----C---CchHHHHHHHHHHhcCCCccCCCCCCCCCCCccHHHHH
Confidence 9999999999999999999999999999999886 5 46899999999999999999999999999999999999
Q ss_pred HHHHhh---CCCChHHHHHHHHHHhhhhhHHhcCCCCCCCCchhhHHHHHHhccCCCccccchhhhhhhhhhhHHHHHHH
Q 012206 365 EFALKH---LPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIW 441 (468)
Q Consensus 365 ~~a~~~---~~~d~~~~la~~ie~~~~~~~~e~~k~k~l~pNvD~~sg~l~~~lGlp~~~~~t~lF~vsR~~GwlAH~ie 441 (468)
++++++ .+++++++++.+||+++.+ .|+++||||||+|+++++||||. ++||+||++||++||+||++|
T Consensus 317 ~~a~~l~~~~g~~~~~~~a~~le~~~~~-------~k~l~pNVDf~sg~i~~~lGip~-~~~t~lFaisR~~Gw~AH~~E 388 (414)
T 3hwk_A 317 RALERVGTVRDGQRWLDIYQVLAAEMAS-------ATGILPNLDFPTGPAYYLMGFDI-ASFTPIFVMSRITGWTAHIME 388 (414)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHH-------HHCCCBCTHHHHHHHHHHHTCCG-GGHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHH-------hcCCCCchHHHHHHHHHHhCCCH-HHHHHHHHHHhHHHHHHHHHH
Confidence 999864 5678999999999999864 27999999999999999999995 999999999999999999999
Q ss_pred HHHcCCCcccCCccchhHH
Q 012206 442 DRALGLPLERPKSVTLDWI 460 (468)
Q Consensus 442 q~~~~~pi~RP~s~~~~~~ 460 (468)
|+..+ +|+||++.|+|.-
T Consensus 389 q~~~~-riiRPr~~Y~G~~ 406 (414)
T 3hwk_A 389 QATAN-ALIRPLSAYCGHE 406 (414)
T ss_dssp HHHSC-CCCCCEEEECSCC
T ss_pred HHhcC-CCcCCCceeeCCC
Confidence 99887 7999999999853
No 3
>3msu_A Citrate synthase; helix bundle, APHA-beta fold, csgid, center for structural G of infectious diseases, transferase; HET: OAA; 1.84A {Francisella tularensis}
Probab=100.00 E-value=1.3e-101 Score=805.47 Aligned_cols=362 Identities=28% Similarity=0.415 Sum_probs=329.2
Q ss_pred ccceehhccccccccccceeeecceecCCCCe-eecCCCHHHHhhhCCCCCCCCCCCHHHHHHHHHhCCCCCHHHHHHHH
Q 012206 64 LGNITVDMVIGGMRGMTGLLWETSLLDPDEGI-RFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLS 142 (468)
Q Consensus 64 ~g~~t~~~~~~Glrg~~~~~t~iS~iD~~~Gi-~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~LLl~G~lPt~~ql~~f~ 142 (468)
.|.+|+|+ ||.|+.+++|+||+||+++|+ +||||+|+||+++. +||||+||||+|+|||++|+++|+
T Consensus 46 ~G~~t~d~---Gl~~~~~~~s~is~iDg~~G~L~YRGy~I~dLa~~~---------~feevayLLl~G~LPt~~el~~f~ 113 (427)
T 3msu_A 46 HGIFTYDP---GFMSTAACESKITYIDGGKGVLLHRGYPIEEWTQKS---------NYRTLCYALIYGELPTDEQVKSFR 113 (427)
T ss_dssp GTEEEECT---TCTTEEEEEESSEEEETTTTEEEETTEEHHHHHHHC---------CHHHHHHHHHHSSCCCHHHHHHHH
T ss_pred CCCEeeCC---CcCCceEEEEEeeEEeCCCCEEEECCeEHHHHhccC---------CHHHHHHHHHcCcCCCHHHHHHHH
Confidence 47899987 999999999999999999995 99999999999985 599999999999999999999999
Q ss_pred HHHHhhCCCcHHHHHHHHcCCCCCChHHHHHHHHHHhcccchhhHHhhhccCCCCCCCchHHHHHHHHHhhHHHHHHHHH
Q 012206 143 KELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQ 222 (468)
Q Consensus 143 ~~L~~~~~lp~~v~~~i~~lP~~~hPM~~l~~avsaL~~~s~f~~~y~~~~~k~~~~e~~~e~al~liA~~p~iaa~iyr 222 (468)
++|.+++.||+++.++|++||+++|||++|+++|++|++++ .+. ..|+..++++++||||+|+|+|++||
T Consensus 114 ~~l~~~~~lp~~~~~~i~~~p~~~hPM~~L~~~v~aL~~~~-------~~~---~~~~~~~~~a~rLiAk~pti~a~~yr 183 (427)
T 3msu_A 114 QEIINKMPVCEHVKAAIAAMPQHTHPMSSLIAGVNVLAAEH-------IHN---GQKESQDEVAKNIVAKIATIAAMAYR 183 (427)
T ss_dssp HHHHHHCCCCHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHH-------HHT---TSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHccCCCHHHHHHHHhCCCCCCHHHHHHHHHHHHhhhc-------cCC---CCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998642 122 24899999999999999999999999
Q ss_pred HHhcCCcccCCCCCCCHHHHHHhhhCC------CChHHHHHHHHHHHHhcCCCCCCCchhHHHHhhccCCChHHHHHHHh
Q 012206 223 RIYKDGKIIPKDDSLDYGGNFSHMLGF------DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAAL 296 (468)
Q Consensus 223 ~~~~~~~~~~p~~~l~~~~nf~~ml~~------~~~~~~~~l~~~LvL~ADHeg~n~St~aarvvaSt~sd~y~avaAgl 296 (468)
+..|. ++++|++++||++||++||++ +++.++++||++|||||||| +|+||||+|+++||++|+|+|++|||
T Consensus 184 ~~~G~-~~~~p~~~ls~a~NfL~ml~~~~~~~~p~~~~~~~ld~~LiLhADHe-~N~ST~taRvvaSt~ad~ysavaAgi 261 (427)
T 3msu_A 184 HNHGK-KFLEPKMEYGYAENFLYMMFADDESYKPDELHIKAMDTIFMLHADHE-QNASTSTVRLSGSTGNSPYAAIIAGI 261 (427)
T ss_dssp HHTTC-CCCCCCTTSCHHHHHHHHHHCSSTTCCCCHHHHHHHHHHHHHHSCCS-SCHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred HHcCC-CCCCCCCccCHHHHHHHHHhcccccCCCCHHHHHHHHHHHhhccCCC-CChhHHHHHHHHccCCCHHHHHHHHH
Confidence 88654 478999999999999999965 48889999999999999999 99999999999999999999999999
Q ss_pred hccccccccccHHHHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCCC--cccCcCCCCCCCCCccHHHHHHHHHhh----
Q 012206 297 NGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGK--VVPGFGHGVLRKTDPRYTCQREFALKH---- 370 (468)
Q Consensus 297 ~aL~GplHGGA~e~v~~~l~~i~~~ig~~~s~~~~~~~v~~~l~~g~--~IpGfGH~vyr~~DPRa~~L~~~a~~~---- 370 (468)
++|+||+||||||+|++||+++ + +++++++||++.+++|+ +||||||||||+.|||+++|+++|+++
T Consensus 262 ~aL~GPlHGGAne~v~~ml~ei----~---~~~~~~~~v~~~l~~~~~~~i~GFGHrVYk~~DPRa~~Lk~~a~~l~~~~ 334 (427)
T 3msu_A 262 TALWGPAHGGANEAVLKMLSEI----G---STENIDKYIAKAKDKDDPFRLMGFGHRVYKNTDPRATAMKKNCEEILAKL 334 (427)
T ss_dssp HHHTSHHHHCHHHHHHHHHHHH----C---STTHHHHHHHHHHTC-----CCSBCCSSSSSCCHHHHHHHHHTHHHHHHG
T ss_pred HHccCCccCCHHHHHHHHHHHh----c---CchHHHHHHHHHHhCCCCcCcCCCCCCCCCCCCccHHHHHHHHHHHHHHh
Confidence 9999999999999999999886 5 45799999999999999 999999999999999999999999875
Q ss_pred -CCCChHHHHHHHHHHhhhhhHHhcCCCCCCCCchhhHHHHHHhccCCCccccchhhhhhhhhhhHHHHHHHHHHcC-CC
Q 012206 371 -LPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRALG-LP 448 (468)
Q Consensus 371 -~~~d~~~~la~~ie~~~~~~~~e~~k~k~l~pNvD~~sg~l~~~lGlp~~~~~t~lF~vsR~~GwlAH~ieq~~~~-~p 448 (468)
.+++++++++.+||+++.+ ++|++.|++|||||||+|+++++||||. ++||+||++||++||+||++||+..+ .+
T Consensus 335 g~~~~~~~~la~~le~~a~~--d~~~~~k~l~pNVDfysg~i~~~lGip~-~~ft~lFaisR~~Gw~AH~~Eq~~~p~~r 411 (427)
T 3msu_A 335 GHSDNPLLTVAKKLEEIALQ--DEFFIERKLFSNVDFYSGIILKAMGIPE-DMFTAIFALARTSGWISQWIEMVNDPAQK 411 (427)
T ss_dssp GGCSSHHHHHHHHHHHHHC--------CCCCCBCHHHHHHHHHHHTTCCG-GGHHHHHHHHHHHHHHHHHHHHHHCTTCC
T ss_pred CCCCcHHHHHHHHHHHHHhh--cccccccCCCCChHHHHHHHHHHcCCCc-cccceehhHHhHHHHHHHHHHHHhCCCCc
Confidence 2379999999999999987 6888999999999999999999999995 99999999999999999999999873 57
Q ss_pred cccCCccchhH
Q 012206 449 LERPKSVTLDW 459 (468)
Q Consensus 449 i~RP~s~~~~~ 459 (468)
|+||+|+|+|.
T Consensus 412 I~RPr~~Y~G~ 422 (427)
T 3msu_A 412 IGRPRQLYTGA 422 (427)
T ss_dssp CCCCEEEECSC
T ss_pred eeCCCceecCC
Confidence 99999999985
No 4
>2h12_A Citrate synthase; acidophIle, acetic acid resistance, allostery, transferase; HET: CMX; 1.85A {Acetobacter aceti}
Probab=100.00 E-value=2.5e-101 Score=806.98 Aligned_cols=373 Identities=27% Similarity=0.426 Sum_probs=338.9
Q ss_pred HHHHHHhhCCccccceehhccccccccccceeeecceecCCCCe-eecCCCHHHHhhhCCCCCCCCCCCHHHHHHHHHhC
Q 012206 52 LKKVKSELGKAQLGNITVDMVIGGMRGMTGLLWETSLLDPDEGI-RFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTG 130 (468)
Q Consensus 52 ~~~~~~~~g~~~~g~~t~~~~~~Glrg~~~~~t~iS~iD~~~Gi-~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~LLl~G 130 (468)
+++|+++. |.+|+| +||+|+++++|+||+||+++|+ +||||+|+||+++. +||||+||||+|
T Consensus 38 ~~~l~~~~-----g~~t~~---~Gl~g~~~~~S~Is~idg~~G~L~YRGy~I~dLa~~~---------~feEvayLLl~G 100 (436)
T 2h12_A 38 IRKLPAQL-----GVFTFD---PGYGETAACNSKITFIDGDKGVLLHRGYPIAQLAENA---------SYEEVIYLLLNG 100 (436)
T ss_dssp CTTHHHHH-----SCEEEC---TTCTTEEEEEESSEEEETTTTEEEETTEEHHHHHHHC---------CHHHHHHHHHHS
T ss_pred ehhhcccC-----CcEeeC---CccCCCeeeeeeceEEeCCCCEEEECCeEHHHHHhcC---------CHHHHHHHHHcC
Confidence 56676664 488998 6999999999999999999995 99999999999986 499999999999
Q ss_pred CCCCHHHHHHHHHHHHhhCCCcHHHHHHHHcCCCCCChHHHHHHHHHHhcccchhhHHhhhccCCCCCCCchHHHHHHHH
Q 012206 131 KVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLI 210 (468)
Q Consensus 131 ~lPt~~ql~~f~~~L~~~~~lp~~v~~~i~~lP~~~hPM~~l~~avsaL~~~s~f~~~y~~~~~k~~~~e~~~e~al~li 210 (468)
+|||++|+++|+++|.+++.+|+++.++++++|+++|||++|+++|++|++++ ++..... .++..++++++||
T Consensus 101 ~LPt~~el~~f~~~l~~~~~lp~~v~~~~~~~p~~~hPM~~l~~~v~aL~~~~------~~~~~~~-~~~~~~~~a~rLi 173 (436)
T 2h12_A 101 ELPNKAQYDTFTNTLTNHTLLHEQIRNFFNGFRRDAHPMAILCGTVGALSAFY------PDANDIA-IPANRDLAAMRLI 173 (436)
T ss_dssp SCCCHHHHHHHHHHHHTTCSCCGGGHHHHTTSCTTCCHHHHHHHHHHHHGGGC------C---------CCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhccCCCHHHHHHHHhCCCCCCHHHHHHHHHHHHhhcC------cccccCC-CHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999853 2222222 2477899999999
Q ss_pred HhhHHHHHHHHHHHhcCCcccCCCCCCCHHHHHHhhhCC-------CChHHHHHHHHHHHHhcCCCCCCCchhHHHHhhc
Q 012206 211 ARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGF-------DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVAS 283 (468)
Q Consensus 211 A~~p~iaa~iyr~~~~~~~~~~p~~~l~~~~nf~~ml~~-------~~~~~~~~l~~~LvL~ADHeg~n~St~aarvvaS 283 (468)
|++|+|+|++||+..+++ +++|++++||++||++|+.+ +++..+++||++|||||||| +|+||||+|++||
T Consensus 174 Ak~ptiaa~~yr~~~g~~-~~~p~~~ls~a~nfl~ml~g~~~~~~~~~~~~~~~ld~~LiLhADHe-~NaSTftaRvvaS 251 (436)
T 2h12_A 174 AKIPTIAAWAYKYTQGEA-FIYPRNDLNYAENFLSMMFARMSEPYKVNPVLARAMNRILILHADHE-QNASTSTVRLAGS 251 (436)
T ss_dssp HHHHHHHHHHHHHHHTCC-CCCCCTTSCHHHHHHHHHHCBTTBCCCCCHHHHHHHHHHHHHHSCCS-SCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHhcCCCCccCCCCHHHHHHHHhhheeecCCC-CchHHHHHHHHHh
Confidence 999999999999887654 78999999999999999964 78999999999999999998 8999999999999
Q ss_pred cCCChHHHHHHHhhccccccccccHHHHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCC--CcccCcCCCCCCCCCccHH
Q 012206 284 ALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSG--KVVPGFGHGVLRKTDPRYT 361 (468)
Q Consensus 284 t~sd~y~avaAgl~aL~GplHGGA~e~v~~~l~~i~~~ig~~~s~~~~~~~v~~~l~~g--~~IpGfGH~vyr~~DPRa~ 361 (468)
|++|+|+|++|||++|+||+||||||+|++||++| | +++++++||++.++++ ++||||||||||+.|||++
T Consensus 252 t~ad~ysaiaAgi~aL~GPlHGGAne~v~~ml~ei----~---~~~~v~~~i~~~l~~~~g~~imGFGHrVYk~~DPRa~ 324 (436)
T 2h12_A 252 TGANPFACIAAGIAALWGPAHGGANEAVLKMLARI----G---KKENIPAFIAQVKDKNSGVKLMGFGHRVYKNFDPRAK 324 (436)
T ss_dssp TTCCHHHHHHHHHHHHHSTTTTTHHHHHHHHHHHH----C---SGGGHHHHHHHHHCTTSCCCCTTBCCSSCSSCCHHHH
T ss_pred cCccHHHHHHHHHHhcCCCccCCHHHHHHHHHHHh----c---CchHHHHHHHHHHhccCCCcccCCCccccCCCCCcHH
Confidence 99999999999999999999999999999999887 6 5789999999999955 9999999999999999999
Q ss_pred HHHHHHHhh---CC--CChHHHHHHHHHHhhhhhHHhcCCCCCCCCchhhHHHHHHhccCCCccccchhhhhhhhhhhHH
Q 012206 362 CQREFALKH---LP--DDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGIC 436 (468)
Q Consensus 362 ~L~~~a~~~---~~--~d~~~~la~~ie~~~~~~~~e~~k~k~l~pNvD~~sg~l~~~lGlp~~~~~t~lF~vsR~~Gwl 436 (468)
+|+++|+++ .+ ++|+++++.+||+++.+ +++|+.|++|||||||+|+++++||||. ++||+||++||++||+
T Consensus 325 iLk~~a~~l~~~~g~~~~~~~~la~~lE~~al~--~~~~~~k~l~pNVDfysg~i~~~lGiP~-~~ft~lFaisR~~GW~ 401 (436)
T 2h12_A 325 IMQQTCHEVLTELGIKDDPLLDLAVELEKIALS--DDYFVQRKLYPNVDFYSGIILKAMGIPT-SMFTVLFAVARTTGWV 401 (436)
T ss_dssp HHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH--SHHHHHTTCCBCTHHHHHHHHHHTTCCG-GGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHh--hhhccccCCCcChHHHHHHHHHHhCCCh-hhhhhhhhhhccccHH
Confidence 999999987 34 78999999999999844 4577789999999999999999999996 9999999999999999
Q ss_pred HHHHHHHHcC-CCcccCCccchhHH
Q 012206 437 SQLIWDRALG-LPLERPKSVTLDWI 460 (468)
Q Consensus 437 AH~ieq~~~~-~pi~RP~s~~~~~~ 460 (468)
||++||+.++ .+|+||+|+|+|.-
T Consensus 402 AH~~Eq~~~~~~kI~RPr~~Y~G~~ 426 (436)
T 2h12_A 402 SQWKEMIEEPGQRISRPRQLYIGAP 426 (436)
T ss_dssp HHHHHHHHSTTCCCCCCEEEECSCC
T ss_pred HHHHHHHhCCCCceecccccccCCC
Confidence 9999999987 56999999999863
No 5
>2ibp_A Citrate synthase; disulfide bond, homodimer, thermophilic, C transferase; 1.60A {Pyrobaculum aerophilum}
Probab=100.00 E-value=2.2e-101 Score=802.30 Aligned_cols=376 Identities=28% Similarity=0.404 Sum_probs=353.6
Q ss_pred hhCCccccceehhccccccccccceeeecceecCCCC-eeecCCCHHHHhhhCCCCCCCCCCCHHHHHHHHHhCCCCCHH
Q 012206 58 ELGKAQLGNITVDMVIGGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKE 136 (468)
Q Consensus 58 ~~g~~~~g~~t~~~~~~Glrg~~~~~t~iS~iD~~~G-i~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~LLl~G~lPt~~ 136 (468)
+||.++++.++++ +.+||+|+.+++|+||+||+++| ++||||+|+||++++ +||||+||||+|+|||++
T Consensus 9 ~~~~~~~~~~~~~-~~~Gl~gv~~~~t~Is~idg~~G~L~YRGy~i~dLa~~~---------~fEeva~LLl~G~lPt~~ 78 (409)
T 2ibp_A 9 KTTGKILQSPCGP-IIHGLEDVLIKSTSISDIDGEKGILWYRGYRIEELARLS---------TYEEVSYLILYGRLPTKR 78 (409)
T ss_dssp EESSCEECCTTSC-EEGGGTTCEEEEECSEEEETTTTEEEETTEEHHHHHHHC---------CHHHHHHHHHHSSCCCHH
T ss_pred CCCCcccCcCCCC-CCCCcCCCeeeeeeCeEEECCCCEEEEcCccHHHHHccC---------CHHHHHHHHHCCCCcCHH
Confidence 6999999999998 77999999999999999999999 699999999999986 599999999999999999
Q ss_pred HHHHHHHHHHhhCCCcHHHHHHHHcCCCCCChHHHHHHHHHHhcccchhh----HHhhhccCCCCCCCchHHHHHHHHHh
Q 012206 137 QVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQ----EAYEKGIHKSKYWEPTYEDSLNLIAR 212 (468)
Q Consensus 137 ql~~f~~~L~~~~~lp~~v~~~i~~lP~~~hPM~~l~~avsaL~~~s~f~----~~y~~~~~k~~~~e~~~e~al~liA~ 212 (468)
|+++|+++|..++.+|+++.++++++|++ |||++|+++|++|+++++++ ++|..|.+|.++|+..++++++|||+
T Consensus 79 el~~f~~~l~~~~~lp~~~~~~~~~~p~~-hPM~~l~~~v~aL~~~~~~~~~~~~~~~~g~~k~~~~~~~~~~a~~Lia~ 157 (409)
T 2ibp_A 79 ELEDYINRMKKYRELHPATVEVIRNLAKA-HPMFALEAAVAAEGAYDEDNQKLIEALSVGRYKAEEKELAYRIAEKLVAK 157 (409)
T ss_dssp HHHHHHHHHHHHTSCCHHHHHHHHHTTTS-CHHHHHHHHHHHHHHHCHHHHHHHHHHHTTCCSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCCCHHHHHHHHhCCcc-CchHHHHHHHHHHhccCccccchhhhhhcccccccCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 99999999999999987765 57888888888899999999999999
Q ss_pred hHHHHHHHHHHHhcCCcccCCCCCCCHHHHHHhhhCC--CChHHHHHHHHHHHHhcCCCCCCCchhHHHHhhccCCChHH
Q 012206 213 VPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYL 290 (468)
Q Consensus 213 ~p~iaa~iyr~~~~~~~~~~p~~~l~~~~nf~~ml~~--~~~~~~~~l~~~LvL~ADHeg~n~St~aarvvaSt~sd~y~ 290 (468)
+|+|+|++||+.+++ ++++|++++||++||++||.+ +++..+++||++|||||||| +|+||||+|+++||++|+|+
T Consensus 158 ~p~i~a~~y~~~~g~-~~i~p~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~LvL~ADHg-~naST~aaRv~aSt~ad~~s 235 (409)
T 2ibp_A 158 MPTIVAYHYRFSRGL-EVVRPRDDLGHAANFLYMMFGREPDPLASRGIDLYLILHADHE-VPASTFAAHVVASTLSDLYS 235 (409)
T ss_dssp HHHHHHHHHHHHTTC-CCCCCCTTSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCS-CCHHHHHHHHHHTTTCCHHH
T ss_pred HHHHHHHHHHHHcCC-CcccCCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHHhcCCC-CChhHHHHHHHhhcCCcHHH
Confidence 999999999998754 478899999999999999965 78999999999999999998 89999999999999999999
Q ss_pred HHHHHhhccccccccccHHHHHHHHHHHHHhcCCCCChhhHHHHHHHHHhC-CCcccCcCCCCCCCCCccHHHHHHHHHh
Q 012206 291 SFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNS-GKVVPGFGHGVLRKTDPRYTCQREFALK 369 (468)
Q Consensus 291 avaAgl~aL~GplHGGA~e~v~~~l~~i~~~ig~~~s~~~~~~~v~~~l~~-g~~IpGfGH~vyr~~DPRa~~L~~~a~~ 369 (468)
|++|||++|+||+||||||+|++||.++ + +++++++||++.+++ |++||||||||||+.|||+++|++++++
T Consensus 236 avaagi~aL~GplHGGAne~v~~ml~ei----~---~~~~~~~~v~~~l~~~~~~i~GfGHrvyk~~DPRa~~L~~~a~~ 308 (409)
T 2ibp_A 236 SVAAAIAALKGPLHGGANEMAVRNYLEI----G---TPAKAKEIVEAATKPGGPKLMGVGHRVYKAYDPRAKIFKEFSRD 308 (409)
T ss_dssp HHHHHHHHHTSTTTSCHHHHHHHHHHHH----C---CGGGHHHHHHHHTSTTCCCCTTBCCSSCSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHccCCccCCchHHHHHHHHHh----C---CHHHHHHHHHHHHHhcCCcCcCCCccccCCCCCchHHHHHHHHH
Confidence 9999999999999999999999999886 5 568999999999999 9999999999999999999999999998
Q ss_pred hC---CCC-hHHHHHHHHHHhh--hhhHHhcCCCCCCCCchhhHHHHHHhccCCCccccchhhhhhhhhhhHHHHHHHHH
Q 012206 370 HL---PDD-PLFQLVSKLFEVV--PPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDR 443 (468)
Q Consensus 370 ~~---~~d-~~~~la~~ie~~~--~~~~~e~~k~k~l~pNvD~~sg~l~~~lGlp~~~~~t~lF~vsR~~GwlAH~ieq~ 443 (468)
+. +++ ++++++.+||+++ ++++ +.|+++||||||+|+++++||||. ++||+||++||++||+||++||+
T Consensus 309 l~~~~~~~g~~~~~a~~le~~~l~~~~~----~~k~l~pNVDf~sg~i~~~lGip~-~~~t~lFaisR~~Gw~AH~~Eq~ 383 (409)
T 2ibp_A 309 YVAKFGDPQNLFAIASAIEQEVLSHPYF----QQRKLYPNVDFWSGIAFYYMGIPY-EYFTPIFAMSRVVGWVAHVLEYW 383 (409)
T ss_dssp HHHHHCCTTCHHHHHHHHHHHHHHCHHH----HHTTCCBCGGGTHHHHHHHHTCCG-GGHHHHHHHHHHHHHHHHHHHHG
T ss_pred HHHHhCCChHHHHHHHHHHHHHccchhh----hhcCCCCChHHHHHHHHHHhCCCH-HhhhhHHHHhccccHHHHHHHHH
Confidence 73 454 9999999999999 6654 348999999999999999999996 99999999999999999999999
Q ss_pred HcCCCcccCCccchhH
Q 012206 444 ALGLPLERPKSVTLDW 459 (468)
Q Consensus 444 ~~~~pi~RP~s~~~~~ 459 (468)
..+ +|+||++.|+|.
T Consensus 384 ~~~-~i~RP~~~Y~G~ 398 (409)
T 2ibp_A 384 ENN-RIFRPRACYIGP 398 (409)
T ss_dssp GGC-CCCCCEEEECSC
T ss_pred hcC-CccCchhhccCC
Confidence 988 699999999986
No 6
>3l96_A Citrate synthase; quaternary, hexamer, GRAM-negative bacteri allostery, oxaloacetate, acetylcoa, NADH, allosteric enzyme transferase; 1.90A {Escherichia coli} SCOP: a.103.1.1 PDB: 3l97_A* 3l98_A* 3l99_A 1k3p_A 1nxe_A 1nxg_A* 1owb_A* 1owc_A 4e6y_A
Probab=100.00 E-value=4.2e-102 Score=809.52 Aligned_cols=372 Identities=26% Similarity=0.416 Sum_probs=339.5
Q ss_pred HHHHHHhhCCccccceehhccccccccccceeeecceecCCCCe-eecCCCHHHHhhhCCCCCCCCCCCHHHHHHHHHhC
Q 012206 52 LKKVKSELGKAQLGNITVDMVIGGMRGMTGLLWETSLLDPDEGI-RFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTG 130 (468)
Q Consensus 52 ~~~~~~~~g~~~~g~~t~~~~~~Glrg~~~~~t~iS~iD~~~Gi-~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~LLl~G 130 (468)
|++|++ .|.+|+|+ ||.|+.+++|+||+||+++|+ +||||+|+||+++. +||||+||||+|
T Consensus 31 ~~~l~~------~g~~~~d~---Gl~~~~~~~s~is~iDg~~G~L~YRGy~I~dLa~~~---------~feevayLLl~G 92 (426)
T 3l96_A 31 IRTLGS------KGVFTFDP---GFTSTTSCESKITFIDGDEGILLHRGFPIDQLATDS---------NYLEVCYILLNG 92 (426)
T ss_dssp CTTHHH------HTCCEECT---TSSSEEEEEESSEEEEGGGTEEEETTEEHHHHHHHS---------CHHHHHHHHHHS
T ss_pred eeeccc------CCcEEeCC---CCCCceEEeEEeEEEECCCCEEEECCeEHHHHHhcC---------CHHHHHHHHHCC
Confidence 455555 37999987 999999999999999999995 99999999999985 599999999999
Q ss_pred CCCCHHHHHHHHHHHHhhCCCcHHHHHHHHcCCCCCChHHHHHHHHHHhcccchhhHHhhhccCCCCCCCchHHHHHHHH
Q 012206 131 KVPSKEQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLI 210 (468)
Q Consensus 131 ~lPt~~ql~~f~~~L~~~~~lp~~v~~~i~~lP~~~hPM~~l~~avsaL~~~s~f~~~y~~~~~k~~~~e~~~e~al~li 210 (468)
+|||++|+++|+++|.+++.||+++.++|++||+++|||++|+++|++|+++ |+++.+. ..++..++++++||
T Consensus 93 ~LPt~~el~~f~~~l~~~~~lp~~~~~~~~~~p~~~hPM~~l~~~vsaL~~~------~~~~~~~-~~~~~~~~~a~rLi 165 (426)
T 3l96_A 93 EKPTQEQYDEFKTTVTRHTMIHEQITRLFHAFRRDSHPMAVMCGITGALAAF------YHDSLDV-NNPRHREIAAFRLL 165 (426)
T ss_dssp SCCCHHHHHHHHHHHHHTCSCCHHHHHHHTTSCTTSCHHHHHHHHHTTGGGT------CGGGCCT-TSHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHccCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHhh------CcccccC-CCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999874 3333221 23577888999999
Q ss_pred HhhHHHHHHHHHHHhcCCcccCCCCCCCHHHHHHhhhCC-------CChHHHHHHHHHHHHhcCCCCCCCchhHHHHhhc
Q 012206 211 ARVPVVAAYVYQRIYKDGKIIPKDDSLDYGGNFSHMLGF-------DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVAS 283 (468)
Q Consensus 211 A~~p~iaa~iyr~~~~~~~~~~p~~~l~~~~nf~~ml~~-------~~~~~~~~l~~~LvL~ADHeg~n~St~aarvvaS 283 (468)
||+|+|+|++||++.|. .+++|++++||++||++||++ +++.++++||++|||||||| +|+||||+|+++|
T Consensus 166 Ak~pti~a~~yr~~~G~-~~~~p~~~ls~a~nfl~ml~g~~~~~~~p~~~~~~~ld~~LiLhADHe-~N~ST~taRvvaS 243 (426)
T 3l96_A 166 SKMPTMAAMCYKYSIGQ-PFVYPRNDLSYAGNFLNMMFSTPCEPYEVNPILERAMDRILILHADHE-QNASTSTVRTAGS 243 (426)
T ss_dssp HHHHHHHHHHHHHHHTC-CCCCCCTTSCHHHHHHHHHHCBTTBCCCCCHHHHHHHHHHHHTTSCCS-SCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCC-CCCCCCCCCCHHHHHHHHhcCCCcccCCCCHHHHHHHHHHHhhcccCC-CCchHHHHHHHhc
Confidence 99999999999988754 478999999999999999954 47889999999999999999 8999999999999
Q ss_pred cCCChHHHHHHHhhccccccccccHHHHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCCC--cccCcCCCCCCCCCccHH
Q 012206 284 ALSDPYLSFAAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGK--VVPGFGHGVLRKTDPRYT 361 (468)
Q Consensus 284 t~sd~y~avaAgl~aL~GplHGGA~e~v~~~l~~i~~~ig~~~s~~~~~~~v~~~l~~g~--~IpGfGH~vyr~~DPRa~ 361 (468)
|++|+|+|++|||++|+||+||||||+|++||+++ + +++++++||++.+++|+ +||||||||||+.|||++
T Consensus 244 t~ad~ysaiaAgi~aL~GplHGGAne~v~~ml~~i----~---~~~~~~~~v~~~l~~~~~~~I~GfGHrVyk~~DPRa~ 316 (426)
T 3l96_A 244 SGANPFACIAAGIASLWGPAHGGANEAALKMLEEI----G---KKENIPEFVRRAKDKNDSFRLMGFGHRVYKNYDPRAT 316 (426)
T ss_dssp TTCCHHHHHHHHHHHHHTTTTSSHHHHHHHHHHHC----C---SSSSTTTTSGGGCCSSCCTGGGTBCCSSCSSCCTTHH
T ss_pred cCCcHHHHHHHHHHhccCCccCCHHHHHHHHHHHh----c---CchhHHHHHHHHHhCCCCcCcCCCCCCCCCCCCccHH
Confidence 99999999999999999999999999999999875 5 35689999999999999 999999999999999999
Q ss_pred HHHHHHHhhC---C-CChHHHHHHHHHHhhhhhHHhcCCCCCCCCchhhHHHHHHhccCCCccccchhhhhhhhhhhHHH
Q 012206 362 CQREFALKHL---P-DDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICS 437 (468)
Q Consensus 362 ~L~~~a~~~~---~-~d~~~~la~~ie~~~~~~~~e~~k~k~l~pNvD~~sg~l~~~lGlp~~~~~t~lF~vsR~~GwlA 437 (468)
+|+++|++++ + ++++++++.+||+++.+ +++++.|+++||||||+|+++++||||. ++||+||++||++||+|
T Consensus 317 ~l~~~a~~l~~~~g~~~~~~~~a~~le~~~~~--~~~~~~k~l~pNVDfysg~i~~~lGip~-~~ft~lFaisR~~Gw~A 393 (426)
T 3l96_A 317 VMRETCHEVLKELGTKDDLLEVAMELENIALN--DPYFIEKKLYPNVDFYSGIILKAMGIPS-SMFTVIFAMARTVGWIA 393 (426)
T ss_dssp HHHHHHHHHHHHTCSCCSSTTHHHHHHHHHHH--CHHHHHHTCCBCHHHHHHHHHHHTTCCT-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCHHHHHHHHHHHHHhh--cccccccCCCCchHHHHHHHHHHcCCCc-ccchhhhHHHHHHHHHH
Confidence 9999998753 2 78999999999999976 5677789999999999999999999996 99999999999999999
Q ss_pred HHHHHHHcCCCcccCCccchhHH
Q 012206 438 QLIWDRALGLPLERPKSVTLDWI 460 (468)
Q Consensus 438 H~ieq~~~~~pi~RP~s~~~~~~ 460 (468)
|++||+..+.||+||+|+|+|.-
T Consensus 394 H~~Eq~~~~~~I~RPr~~Y~G~~ 416 (426)
T 3l96_A 394 HWSEMHSDGMKIARPRQLYTGYE 416 (426)
T ss_dssp HHHHHHHHHCCCCCCEEEECSCC
T ss_pred HHHHHHhcCCCccCCcceecCCC
Confidence 99999997678999999999853
No 7
>2c6x_A Citrate synthase 1; tricarboxylic acid cycle, transferase, allosteric enzyme, enzyme thermostability; HET: COZ CIT; 3.4A {Bacillus subtilis}
Probab=100.00 E-value=1.5e-99 Score=778.39 Aligned_cols=354 Identities=23% Similarity=0.342 Sum_probs=332.9
Q ss_pred ccccccccceeeecceecCCCC-eeecCCCHHHHhhhCCCCCCCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHhhCCC
Q 012206 73 IGGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLSKELRDRATV 151 (468)
Q Consensus 73 ~~Glrg~~~~~t~iS~iD~~~G-i~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~~l 151 (468)
.+||+|+.+++|+||+||+++| ++||||+|+||+++. +||||+||||+|+|||++|+++|+++|..++.+
T Consensus 2 ~~Gl~g~~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~---------~fEeva~LL~~G~lP~~~el~~f~~~l~~~~~l 72 (363)
T 2c6x_A 2 HYGLKGITCVETSISHIDGEKGRLIYRGHHAKDIALNH---------SFEEAAYLILFGKLPSTEELQVFKDKLAAERNL 72 (363)
T ss_dssp CGGGTTCCCEEESSEEEETTTTEEEETTEEHHHHHHHS---------CHHHHHHHHHHSSCCCHHHHHHHHHHHHHHTSC
T ss_pred CCcCCCCeeeeeeCeEEECCCCEEEEcCccHHHHHccC---------CHHHHHHHHHCCCCcCHHHHHHHHHHHHHccCC
Confidence 4799999999999999999999 699999999999986 599999999999999999999999999999999
Q ss_pred cHHHHHHHHcCCCCCChHHHHHHHHHHhcccchhhHHhhhccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHhcCCccc
Q 012206 152 PDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKII 231 (468)
Q Consensus 152 p~~v~~~i~~lP~~~hPM~~l~~avsaL~~~s~f~~~y~~~~~k~~~~e~~~e~al~liA~~p~iaa~iyr~~~~~~~~~ 231 (468)
|+++.++++.+|+++|||++|+++|++|++ + . .+ |+..++++++|||++|+|+|++||+..++ +++
T Consensus 73 p~~~~~~~~~~p~~~hpM~~l~~~v~~l~~-~-~----------~~-~~~~~~~a~~Lia~~p~i~a~~~~~~~g~-~~i 138 (363)
T 2c6x_A 73 PEHIERLIQSLPNNMDDMSVLRTVVSALGE-N-T----------YT-FHPKTEEAIRLIAITPSIIAYRKRWTRGE-QAI 138 (363)
T ss_dssp CHHHHHHHHHSCSSSCHHHHHHHHHHHHCC-S-S----------CC-SSCCHHHHHHHHHHHHHHHHHHHHHHTTC-CCC
T ss_pred CHHHHHHHHhCcccCCchHHHHHHHHhhcC-C-C----------CC-hHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCc
Confidence 999999999999999999999999999986 1 1 01 78899999999999999999999998754 478
Q ss_pred CCCCCCCHHHHHHhhhCC--CChHHHHHHHHHHHHhcCCCCCCCchhHHHHhhccCCChHHHHHHHhhccccccccccHH
Q 012206 232 PKDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQ 309 (468)
Q Consensus 232 ~p~~~l~~~~nf~~ml~~--~~~~~~~~l~~~LvL~ADHeg~n~St~aarvvaSt~sd~y~avaAgl~aL~GplHGGA~e 309 (468)
+|++++||++||++|+.+ +++..+++||++|||||||| +|+||||+|+++||++|+|+|++|||++|+||+||||||
T Consensus 139 ~p~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~aDHg-~n~St~aarv~aSt~~d~~savaagi~aL~GplHGGAne 217 (363)
T 2c6x_A 139 APSSQYGHVENYYYMLTGEQPSEAKKKALETYMILATEHG-MNASTFSARVTLSTESDLVSAVTAALGTMKGPLHGGAPS 217 (363)
T ss_dssp CCCTTSCSHHHHHHHHHSSCCCHHHHHHHHHHHHHHHCCS-SCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTSSCCCH
T ss_pred CCCCCCCHHHHHHHHHcCCCCCHHHHHHHHHHHHHhccCC-CcHHHHHHHHHHhcCccHHHHHHHHHHHcccCccCCchH
Confidence 899999999999999965 78999999999999999998 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCCCcccCcCCCCCCCCCccHHHHHHHHHhhCCCChHHHHHHHHHHhhhh
Q 012206 310 EVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPP 389 (468)
Q Consensus 310 ~v~~~l~~i~~~ig~~~s~~~~~~~v~~~l~~g~~IpGfGH~vyr~~DPRa~~L~~~a~~~~~~d~~~~la~~ie~~~~~ 389 (468)
+|++||+++ + +++++++||++.+++|++||||||||||+.|||+++|+++++++++++++++++.+||+++.+
T Consensus 218 ~v~~~l~~i----~---~~~~~~~~v~~~l~~~~~i~GfGHrvyk~~DPRa~~l~~~a~~~~~~~~~~~~a~~le~~~~~ 290 (363)
T 2c6x_A 218 AVTKMLEDI----G---EKEHAEAYLKEKLEKGERLMGFGHRVYKTKDPRAEALRQKAEEVAGNDRDLDLALHVEAEAIR 290 (363)
T ss_dssp HHHHHHHTC----C---SSTTHHHHHHHHHHTTCCCTTBCCSSCSSCCHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHh----C---ChhhHHHHHHHHHHcCCcccCCCCcccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 999999775 5 457899999999999999999999999999999999999999987789999999999999976
Q ss_pred hHHhcCCCCCCCCchhhHHHHHHhccCCCccccchhhhhhhhhhhHHHHHHHHHHcCCCcccCCccchhH
Q 012206 390 ILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRALGLPLERPKSVTLDW 459 (468)
Q Consensus 390 ~~~e~~k~k~l~pNvD~~sg~l~~~lGlp~~~~~t~lF~vsR~~GwlAH~ieq~~~~~pi~RP~s~~~~~ 459 (468)
...+|++.|++|||||||+|+++++||||. ++||+||++||++||+||++||+.++ +|+||+|+|+|.
T Consensus 291 ~~g~yf~~k~l~pNVD~~sg~i~~~lG~p~-~~~t~lF~i~R~~Gw~AH~~Eq~~~~-~i~RP~~~Y~G~ 358 (363)
T 2c6x_A 291 LLEIYKPGRKLYTNVEFYAAAVMRAIDFDD-ELFTPTFSASRMVGWCAHVLEQAENN-MIFRPSAQYTGA 358 (363)
T ss_dssp HHHHHSCSSCCCBCTHHHHHHHHHHTTCCG-GGHHHHHHHHHHHHHHHHHHHHTTTC-CCCCCEEEECSC
T ss_pred hhccccccCCCCcChHHHHHHHHHHhCCCh-hhhhhhhHHhccccHHHHHHHHHHcC-CccCCccccCCC
Confidence 333788999999999999999999999996 99999999999999999999999998 899999999985
No 8
>2p2w_A Citrate synthase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; HET: FLC; 1.90A {Thermotoga maritima}
Probab=100.00 E-value=9.3e-100 Score=781.31 Aligned_cols=351 Identities=26% Similarity=0.396 Sum_probs=325.0
Q ss_pred ccccccccccceeeecceecCCCC-eeecCCCHHHHhhhCCCCCCCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHhhC
Q 012206 71 MVIGGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLSKELRDRA 149 (468)
Q Consensus 71 ~~~~Glrg~~~~~t~iS~iD~~~G-i~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~ 149 (468)
++.+||+|+.+++|+||+||+++| ++||||+|+||++++ +||||+||||+|+|||++|+++|+++|..++
T Consensus 1 ~~~~Gl~g~~~~~T~Is~id~~~G~L~YRGy~i~dLa~~~---------~feeva~LLl~G~lPt~~el~~f~~~l~~~~ 71 (367)
T 2p2w_A 1 MIQKGLEGVKICESSICYLDGINGRLYYRGIPVEELAEKS---------TFEETAYFLWYGKLPTKSELEEFKRKMADYR 71 (367)
T ss_dssp CCCTTCTTCCCCCCSSEEEETTTTEEEETTEEHHHHHHHC---------CHHHHHHHHHHSSCCCHHHHHHHHHHHHHTC
T ss_pred CCCCcCCCCeeeeeeCeEEECCCCEEEECCeeHHHHHcCC---------CHHHHHHHHHCCCCCCHHHHHHHHHHHHHcc
Confidence 355899999999999999999999 699999999999986 5999999999999999999999999999999
Q ss_pred CCcHHHHHHHHcCCCCCChHHHHHHHHHHhcccchhhHHhhhccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHhcCCc
Q 012206 150 TVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGK 229 (468)
Q Consensus 150 ~lp~~v~~~i~~lP~~~hPM~~l~~avsaL~~~s~f~~~y~~~~~k~~~~e~~~e~al~liA~~p~iaa~iyr~~~~~~~ 229 (468)
.+|+.+.++|+.+|+++|||++|+++|++|+++ |++ |+..++++++|||++|+|+|++||++.++ +
T Consensus 72 ~lp~~~~~~~~~~p~~~hpM~~l~~~v~~l~~~------~~~-------~~~~~~~a~~lia~~p~i~a~~y~~~~g~-~ 137 (367)
T 2p2w_A 72 ELPAEALGILYHLPKNLHYIDVLKIFLSIHGSM------DGN-------DEDLREKAIRVASVFPTILAYYYRYSKGK-E 137 (367)
T ss_dssp CCCHHHHHHHTTSCSCCCHHHHHHHHHSCC--------------------CHHHHHHHHHHHHHHHHHHHHHHHHTTC-C
T ss_pred CCCHHHHHHHHhCccCCChHHHHHHHHHHHhcc------CCC-------hHHHHHHHHHHHHHHHHHHHHHHHHHcCC-C
Confidence 999999999999999999999999999999874 221 78899999999999999999999998754 4
Q ss_pred ccCCCCCCCHHHHHHhhhCCCChHHHHHHHHHHHHhcCCCCCCCchhHHHHhhccCCChHHHHHHHhhccccccccccHH
Q 012206 230 IIPKDDSLDYGGNFSHMLGFDDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQ 309 (468)
Q Consensus 230 ~~~p~~~l~~~~nf~~ml~~~~~~~~~~l~~~LvL~ADHeg~n~St~aarvvaSt~sd~y~avaAgl~aL~GplHGGA~e 309 (468)
+++|++++||++||++|+++..+..+++||++|||||||| +|+||||+|+++||++|+|+|++|||++|+||+||||||
T Consensus 138 ~i~p~~~l~~a~nfl~ml~~~~~~~~~~ld~~LvL~ADHg-~NaSTftaRvvaSt~ad~ysavaagi~aL~GPlHGGAne 216 (367)
T 2p2w_A 138 LIRPRKDLSHVENFYYMMFGERNEKIRLLESAFILLMEQD-INASTFAALVIASTLSDLYSCIVGALGALKGPLHGGASE 216 (367)
T ss_dssp CCCCCTTSCHHHHHHHHHHSCCCTTHHHHHHHHHHHSCCS-SCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHH
T ss_pred CCCCCCCCCHHHHHHHHhcCCChHHHHHHHHHHhHhccCC-CchHHHHHHHHHhcCccHHHHHHHHHHHccCCccCChHH
Confidence 7889999999999999998744888999999999999998 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCCCcccCcCCCCCCCCCccHHHHHHHHHhhCCCChHHHHHHHHHHhhhh
Q 012206 310 EVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPP 389 (468)
Q Consensus 310 ~v~~~l~~i~~~ig~~~s~~~~~~~v~~~l~~g~~IpGfGH~vyr~~DPRa~~L~~~a~~~~~~d~~~~la~~ie~~~~~ 389 (468)
+|++||+++ + +++++++||++.+++|++||||||||||+.|||+++|+++++++.+++++++++.+||+++.
T Consensus 217 ~v~~ml~ei----~---~~~~~~~~i~~~l~~~~~i~GfGHrVyk~~DPRa~~l~~~a~~~~~~~~~~~~a~~le~~~~- 288 (367)
T 2p2w_A 217 KVPPMLEEI----G---SEDRVEEFVQKCLKEKRKIMGFGHRVYKTYDPRAVFLKRVLQEHFPDSKLFRIASKLEEYIV- 288 (367)
T ss_dssp HHHHHHHHH----C---SGGGHHHHHHHHHHHTCCCTTBCCSSCSSCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHh----c---CchhHHHHHHHHHHcCCccccCCccccCCCCCchHHHHHHHHHhcCCcHHHHHHHHHHHHHH-
Confidence 999999886 5 56899999999999999999999999999999999999999998667899999999999964
Q ss_pred hHHhcCCCCCCCCchhhHHHHHHhccCCCccccchhhhhhhhhhhHHHHHHHHHHcCCCcccCCccchhH
Q 012206 390 ILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRALGLPLERPKSVTLDW 459 (468)
Q Consensus 390 ~~~e~~k~k~l~pNvD~~sg~l~~~lGlp~~~~~t~lF~vsR~~GwlAH~ieq~~~~~pi~RP~s~~~~~ 459 (468)
+++ .|++|||||||+|+++++||||. ++||+||++||++||+||++||+..| +|+||+++|+|.
T Consensus 289 ---~~~-~k~l~pNVDf~sg~v~~~lGip~-~~~t~lFai~R~~Gw~AH~~Eq~~~~-~iiRP~~~Y~G~ 352 (367)
T 2p2w_A 289 ---SNK-IKNIYPNVDLYSSVLFEELGFPR-NMFTALFATARVVGWTAHVIEYVSDN-KLIRPTSEYVGP 352 (367)
T ss_dssp ---HTT-GGGCCBCHHHHHHHHHHHTTCCG-GGHHHHHHHHHHHHHHHHHHHHHTTC-CCCCCCCCCCSC
T ss_pred ---HHh-ccCCCCChHHHHHHHHHHhCCCh-hhhhhHHHHhccccHHHHHHHHHhcC-CccCccccccCC
Confidence 344 68999999999999999999996 99999999999999999999999887 699999999985
No 9
>3tqg_A 2-methylcitrate synthase; energy metabolism, transferase; 2.30A {Coxiella burnetii} SCOP: a.103.1.0
Probab=100.00 E-value=4.9e-100 Score=783.92 Aligned_cols=354 Identities=24% Similarity=0.376 Sum_probs=318.8
Q ss_pred cceehhccccccccccceeeecceecCCCC-eeecCCCHHHHhhhCCCCCCCCCCCHHHHHHHHHhCCCCCHHHHHHHHH
Q 012206 65 GNITVDMVIGGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLSK 143 (468)
Q Consensus 65 g~~t~~~~~~Glrg~~~~~t~iS~iD~~~G-i~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~LLl~G~lPt~~ql~~f~~ 143 (468)
|-.|+| .||+|+.+++|+||+||+++| |+||||+|+||+++. +||||+||||+|+|||++|+++|++
T Consensus 3 ~~~~~~---~Gl~gv~~~~t~Is~idg~~g~L~YRGy~I~dLa~~~---------~feev~yLLl~G~lPt~~el~~f~~ 70 (375)
T 3tqg_A 3 AMTKTA---KGLRGQSAGETSIATVGKEGHGLTYRGYRIEDLAANA---------TFEEVAYLLLKNKLPTKSELDAYTK 70 (375)
T ss_dssp ----------------CCEESSEEECTTSCCEEETTEEHHHHHHHC---------CHHHHHHHHHHSSCCCHHHHHHHHH
T ss_pred CCcccC---CccCCCeEeeeeceEEeCCCCEEEECCeeHHHHHhcC---------CHHHHHHHHHcCcCcCHHHHHHHHH
Confidence 344555 499999999999999999887 699999999999985 5999999999999999999999999
Q ss_pred HHHhhCCCcHHHHHHHHcCCCCCChHHHHHHHHHHhcccchhhHHhhhccCCCCCCCchHHHHHHHHHhhHHHHHHHHHH
Q 012206 144 ELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQR 223 (468)
Q Consensus 144 ~L~~~~~lp~~v~~~i~~lP~~~hPM~~l~~avsaL~~~s~f~~~y~~~~~k~~~~e~~~e~al~liA~~p~iaa~iyr~ 223 (468)
+|.+++.||+++.++|++||+++|||++|+++|++|++++++. .|+..++++++||||+|+|+|++||+
T Consensus 71 ~l~~~~~lp~~~~~~~~~~p~~~hpM~~l~~~v~aL~~~~~~~-----------~~~~~~~~a~~LiAk~p~i~a~~yr~ 139 (375)
T 3tqg_A 71 KLVNLRSLPPALKDTLERIPASSHPMDVMRTGCSMLGNLEPEN-----------GFENEQNIADRLVAIFPAIQCYWYHY 139 (375)
T ss_dssp HHHTTCCCCHHHHHHHHTSCTTSCHHHHHHHHHHHHHHHSCCC-----------SGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHccCCCHHHHHHHHhCCCCCChHHHHHHHHHHHHhcCCCC-----------ChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998754331 27889999999999999999999998
Q ss_pred HhcCCcccCCCCC-CCHHHHHHhhhCC--CChHHHHHHHHHHHHhcCCCCCCCchhHHHHhhccCCChHHHHHHHhhccc
Q 012206 224 IYKDGKIIPKDDS-LDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLA 300 (468)
Q Consensus 224 ~~~~~~~~~p~~~-l~~~~nf~~ml~~--~~~~~~~~l~~~LvL~ADHeg~n~St~aarvvaSt~sd~y~avaAgl~aL~ 300 (468)
+.++ .++.|+++ +||++||++||++ +++.++++||++|||||||| +|+||||+|+++||++|+|+|++|||++|+
T Consensus 140 ~~g~-~~i~p~~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lil~ADHe-~n~St~tarvvaSt~ad~ysavaagi~aL~ 217 (375)
T 3tqg_A 140 SHHG-KRIDTELDDLTLAGYFLHLLLGKKAAQMAIDCMNASLILYAEHE-FNASTFAARVCSATLSDIYSAVTAAIATLR 217 (375)
T ss_dssp HHHC-CCCCCCCCCSSHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCS-SCHHHHHHHHHHTTTCCHHHHHHHHHHHHT
T ss_pred hcCC-CCcCCCCccccHHHHHHHHhcCCCCCHHHHHHHHHHHHHhccCC-CCHHHHHHHHHHccCCCHHHHHHHHHHhcc
Confidence 7654 57888887 9999999999976 78999999999999999999 899999999999999999999999999999
Q ss_pred cccccccHHHHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCCCcccCcCCCCCCCCCccHHHHHHHHHhhC---CCChHH
Q 012206 301 GPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHL---PDDPLF 377 (468)
Q Consensus 301 GplHGGA~e~v~~~l~~i~~~ig~~~s~~~~~~~v~~~l~~g~~IpGfGH~vyr~~DPRa~~L~~~a~~~~---~~d~~~ 377 (468)
||+||||||+|++||+++ + +++++++||++.+++|++||||||||||+.|||+++|+++++++. ++++++
T Consensus 218 GplHGGAne~v~~ml~~i----~---~~~~~~~~v~~~~~~~~~i~GfGHrVyk~~DPRa~~l~~~a~~l~~~~~~~~~~ 290 (375)
T 3tqg_A 218 GPLHGGANEAAMDLIMLY----K---TPSEAIAGIKRKLANKELIMGFGHAVYRERDPRNAIIKSWAQKLAPNAADGYLF 290 (375)
T ss_dssp SHHHHCHHHHHHHHHTTC----S---SHHHHHHHHHHHHHTCCCCTTBCCSSCSSCCHHHHHHHHHHHHHTTTSTTTHHH
T ss_pred CcccCCHHHHHHHHHHHh----c---ChhHHHHHHHHHHhcCCCccCCCCCCCCCCCccHHHHHHHHHHHHHhcCCCHHH
Confidence 999999999999999765 5 578999999999999999999999999999999999999999973 568999
Q ss_pred HHHHHHHHhhhhhHHhcCCCCCCCCchhhHHHHHHhccCCCccccchhhhhhhhhhhHHHHHHHHHHcCCCcccCCccch
Q 012206 378 QLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRALGLPLERPKSVTL 457 (468)
Q Consensus 378 ~la~~ie~~~~~~~~e~~k~k~l~pNvD~~sg~l~~~lGlp~~~~~t~lF~vsR~~GwlAH~ieq~~~~~pi~RP~s~~~ 457 (468)
+++.+||+++.+ .|+++||||||+|+++++||||. ++||++|++||++||+||++||+..| +|+||++.|+
T Consensus 291 ~~a~~le~~~~~-------~k~l~pNVDf~sg~i~~~lGip~-~~~t~lFa~sR~~Gw~AH~~Eq~~~~-~iiRP~~~Y~ 361 (375)
T 3tqg_A 291 DISDAIENTMQD-------EKKLFPNLDFYSATAYHFLNIPT-KLFTPIFVMSRVTGWCAHIFEQRKDN-RIIRPNADYI 361 (375)
T ss_dssp HHHHHHHHHHHH-------HHCCCBCHHHHHHHHHHHTTCCG-GGHHHHHHHHHHHHHHHHHHHHHHSC-CCCCCEEEEC
T ss_pred HHHHHHHHHHHH-------hcCCCCChHHHHHHHHHHcCCCH-HHHHHHHHHHhHHHHHHHHHHHHhcC-CCCCCcceec
Confidence 999999999854 37999999999999999999996 99999999999999999999999988 6899999999
Q ss_pred hH
Q 012206 458 DW 459 (468)
Q Consensus 458 ~~ 459 (468)
|.
T Consensus 362 G~ 363 (375)
T 3tqg_A 362 GP 363 (375)
T ss_dssp SC
T ss_pred CC
Confidence 85
No 10
>3o8j_A 2-methylcitrate synthase; short chain fatty acids, propionate metabolism, 2-methylcitr cycle, PRPC or 2-MCS, GLTA or CS, 2-methy synthase; 2.41A {Salmonella enterica}
Probab=100.00 E-value=8.6e-100 Score=787.56 Aligned_cols=365 Identities=24% Similarity=0.337 Sum_probs=317.5
Q ss_pred CCccccceehhc---cccccccccceeeecceecCCCC-eeecCCCHHHHhhhCCCCCCCCCCCHHHHHHHHHhCCCCCH
Q 012206 60 GKAQLGNITVDM---VIGGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSK 135 (468)
Q Consensus 60 g~~~~g~~t~~~---~~~Glrg~~~~~t~iS~iD~~~G-i~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~LLl~G~lPt~ 135 (468)
|.+++...|+++ +..||+|+.+++|+||+||+++| |+||||+|+||+++. +||||+||||+|+|||+
T Consensus 18 ~~~~~~~~~~~~~~~~~~Gl~gv~~~~T~Is~idg~~g~L~YRGy~I~dLa~~~---------~fEevayLLl~G~LPt~ 88 (404)
T 3o8j_A 18 DTTILQNNTHVIKPKKSVALSGVPAGNTALCTVGKSGNDLHYRGYDILDLAEHC---------EFEEVAHLLIHGKLPTR 88 (404)
T ss_dssp -----------------------CCCEESSEEECC-CCCEEETTEEHHHHHHHC---------CHHHHHHHHHTSSCCCH
T ss_pred CcchhhcCcccCCCCCCCCCCCceEeeeeceeeeCCCCEEEECCeEHHHHHhcC---------CHHHHHHHHHcCcCCCH
Confidence 445555556655 56899999999999999999888 699999999999985 59999999999999999
Q ss_pred HHHHHHHHHHHhhCCCcHHHHHHHHcCCCCCChHHHHHHHHHHhcccchhhHHhhhccCCCCCCCchHHHHHHHHHhhHH
Q 012206 136 EQVDGLSKELRDRATVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPV 215 (468)
Q Consensus 136 ~ql~~f~~~L~~~~~lp~~v~~~i~~lP~~~hPM~~l~~avsaL~~~s~f~~~y~~~~~k~~~~e~~~e~al~liA~~p~ 215 (468)
+|+++|+++|.+++.||+++.++|++||+++|||++|+++|++|++++++. ++..++..++++++||||+|+
T Consensus 89 ~el~~f~~~l~~~~~lp~~~~~~~~~~p~~~hPM~~L~~~vsaL~~~~~~~--------~d~~~~~~~~~a~rLiAk~pt 160 (404)
T 3o8j_A 89 DELNAYKSKLKALRGLPANVRTVLEALPAASHPMDVMRTGVSALGCTLPEK--------EGHTVSGARDIADKLLASLSS 160 (404)
T ss_dssp HHHHHHHHHHHTTCCCCHHHHHHHHTSCTTSCHHHHHHHHHHHHHHHSCCC--------TTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCCCHHHHHHHHhCCCCCChHHHHHHHHHHHHhcCccc--------ccCCcHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998754432 122346778999999999999
Q ss_pred HHHHHHHHHhcCCcccC-CCCCCCHHHHHHhhhCC--CChHHHHHHHHHHHHhcCCCCCCCchhHHHHhhccCCChHHHH
Q 012206 216 VAAYVYQRIYKDGKIIP-KDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSF 292 (468)
Q Consensus 216 iaa~iyr~~~~~~~~~~-p~~~l~~~~nf~~ml~~--~~~~~~~~l~~~LvL~ADHeg~n~St~aarvvaSt~sd~y~av 292 (468)
|+|++||...++ +++. |++++||++||++||++ |++.++++||++|||||||| +|+||||+|+++||++|+|+|+
T Consensus 161 i~a~~yr~~~g~-~~i~~~~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~LiLhADHe-~N~St~taRvvaSt~ad~ysav 238 (404)
T 3o8j_A 161 ILLYWYHYSHNG-ERIQPETDDDSIGGHFLHLLHGEKPTQSWEKAMHISLVLYAEHE-FNASTFTSRVIAGTGSDVYSAI 238 (404)
T ss_dssp HHHHHHHHHHHC-CCCCCCCCCSSHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCS-SSHHHHHHHHHHTTTCCHHHHH
T ss_pred HHHHHHHHHcCC-CCCCCCCCCCCHHHHHHHHhcCCCCCHHHHHHHHHHHhhccCCC-CChHHHHHHHHHhcCCCHHHHH
Confidence 999999987654 4554 56899999999999976 78999999999999999999 8999999999999999999999
Q ss_pred HHHhhccccccccccHHHHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCCCcccCcCCCCCCCCCccHHHHHHHHHhhC-
Q 012206 293 AAALNGLAGPLHGLANQEVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHL- 371 (468)
Q Consensus 293 aAgl~aL~GplHGGA~e~v~~~l~~i~~~ig~~~s~~~~~~~v~~~l~~g~~IpGfGH~vyr~~DPRa~~L~~~a~~~~- 371 (468)
+|||++|+||+||||||+|++||+++ + +++++++||++.+++|++||||||||||+.|||+++|+++++++.
T Consensus 239 aagi~aL~GplHGGAne~v~~ml~~i----~---~~~~~~~~v~~~l~~~~~I~GFGHrVyk~~DPRa~~l~~~a~~l~~ 311 (404)
T 3o8j_A 239 IGAIGALRGPKHGGANEVSLEIQQRY----E---TPDEAEADIRKRVENKEVVIGFGHPVYTIADPRHQVIKRVAKQLSE 311 (404)
T ss_dssp HHHHHHHTSTTTTCHHHHHHHHHTTC----S---SHHHHHHHHHHHHHTTCCCTTBCCSSCSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHccCCCcCCHHHHHHHHHHHh----c---CchhHHHHHHHHHhcCCcccCCCCCCCCCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999764 5 578999999999999999999999999999999999999999874
Q ss_pred --CCChHHHHHHHHHHhhhhhHHhcCCCCCCCCchhhHHHHHHhccCCCccccchhhhhhhhhhhHHHHHHHHHHcCCCc
Q 012206 372 --PDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRALGLPL 449 (468)
Q Consensus 372 --~~d~~~~la~~ie~~~~~~~~e~~k~k~l~pNvD~~sg~l~~~lGlp~~~~~t~lF~vsR~~GwlAH~ieq~~~~~pi 449 (468)
+++++++++.+||+++.+ .|++|||||||+|+++++||||. ++||+||++||++||+||++||+..| +|
T Consensus 312 ~~g~~~~~~~a~~le~~~~~-------~k~l~pNVDf~sg~i~~~lGip~-~~~t~lFaisR~~Gw~AH~~Eq~~~~-ri 382 (404)
T 3o8j_A 312 EGGSLKMYHIADRLETVMWE-------TKKMFPNLDWFSAVSYNMMGVPT-EMFTPLFVIARVTGWAAHIIEQRQDN-KI 382 (404)
T ss_dssp HHSCCHHHHHHHHHHHHHHH-------HHCCCBCTTTHHHHHHHHTTCCG-GGHHHHHHHHHHHHHHHHHHHHHHSC-CC
T ss_pred hcCCcHHHHHHHHHHHHHHH-------hcCCCcChHHHHHHHHHHcCCCh-HhHHHHHHHHHHHHHHHHHHHHHhcC-CC
Confidence 468999999999999843 47999999999999999999995 99999999999999999999999988 68
Q ss_pred ccCCccchhH
Q 012206 450 ERPKSVTLDW 459 (468)
Q Consensus 450 ~RP~s~~~~~ 459 (468)
+||++.|+|.
T Consensus 383 iRPr~~Y~G~ 392 (404)
T 3o8j_A 383 IRPSANYTGP 392 (404)
T ss_dssp CCCCEEECSC
T ss_pred CCCcceecCC
Confidence 8999999986
No 11
>1o7x_A Citrate synthase; lyase, tricarboxylic acid cycle; 2.7A {Sulfolobus solfataricus} SCOP: a.103.1.1
Probab=100.00 E-value=1.9e-98 Score=773.94 Aligned_cols=353 Identities=27% Similarity=0.401 Sum_probs=330.2
Q ss_pred cccccccceeeecceecCCCC-eeecCCCHHHHhhhCCCCCCCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHhhCCCc
Q 012206 74 GGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLSKELRDRATVP 152 (468)
Q Consensus 74 ~Glrg~~~~~t~iS~iD~~~G-i~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~~lp 152 (468)
+||+|+.+++|+||+||+++| ++||||+|+||+++. +||||+||||+|+|||++|+++|+++|..++.+|
T Consensus 6 ~Gl~gv~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~---------~feeva~LL~~G~lPt~~el~~f~~~l~~~~~lp 76 (377)
T 1o7x_A 6 KGLENVIIKVTNLTFIDGEKGILRYRGYNIEDLVNYG---------SYEETIYLMLYGKLPTKKELNDLKAKLNEEYEVP 76 (377)
T ss_dssp GGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHHC---------CHHHHHHHHHHSSCCCHHHHHHHHHHHHTCCCCC
T ss_pred cccCCCeeeeeeCeEEECCCCEEEECCccHHHHHcCC---------CHHHHHHHHHCCCCcCHHHHHHHHHHHHHccCCC
Confidence 799999999999999999999 699999999999985 5999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCChHHHHHHHHHHhcccchhhHHhhhccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHhcCCcccC
Q 012206 153 DYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIP 232 (468)
Q Consensus 153 ~~v~~~i~~lP~~~hPM~~l~~avsaL~~~s~f~~~y~~~~~k~~~~e~~~e~al~liA~~p~iaa~iyr~~~~~~~~~~ 232 (468)
+++.++++.+|+++|||++|+++|++|+++ |++. + .|+..++++++|||++|+|+|++||+..++ ++++
T Consensus 77 ~~~~~~~~~~p~~~hpM~~l~~~v~~l~~~------~~~~--~--~~~~~~~~a~~Lia~~p~i~a~~y~~~~g~-~~i~ 145 (377)
T 1o7x_A 77 QEVLDTIYLMPKEADAIGLLEVGTAALASI------DKNF--K--WKENDKEKAISIIAKMATLVANVYRRKEGN-KPRI 145 (377)
T ss_dssp HHHHHHHHHSCTTSCHHHHHHHHHHHHHHH------CCCC--C--SSSSHHHHHHHHHHHHHHHHHHHHHHHTTC-CCCC
T ss_pred HHHHHHHHhCcccCCcHHHHHHHHHHHhhc------CCCc--C--CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCC
Confidence 999999999999999999999999999874 2222 1 289999999999999999999999988754 4788
Q ss_pred CCCCCCHHHHHHhhhCC--CChHHHHHHHHHHHHhcCCCCCCCchhHHHHhhccCCChHHHHHHHhhccccccccccHHH
Q 012206 233 KDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQE 310 (468)
Q Consensus 233 p~~~l~~~~nf~~ml~~--~~~~~~~~l~~~LvL~ADHeg~n~St~aarvvaSt~sd~y~avaAgl~aL~GplHGGA~e~ 310 (468)
|++++||++||++|+++ +++..+++||++|||||||| +|+||||+|+++||++|+|+|++|||++|+||+||||||+
T Consensus 146 p~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg-~n~St~aaRv~aSt~ad~~savaagi~aL~GplHGGAne~ 224 (377)
T 1o7x_A 146 PEPSDSFAKSFLLASFAREPTTDEINAMDKALILYTDHE-VPASTTAALVAASTLSDMYSSLTAALAALKGPLHGGAAEE 224 (377)
T ss_dssp CCCCSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCS-CCHHHHHHHHHHHTTCCHHHHHHHHHHHHTSTTTTTHHHH
T ss_pred CCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccCC-CChHHHHHHHHHhcCCcHHHHHHHHHHhcCCCCCCChHHH
Confidence 99999999999999975 78999999999999999998 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCChhhHHHHHHHHH-hCCCcccCcCCCCCCCCCccHHHHHHHHHhhC---CC-ChHHHHHHHHHH
Q 012206 311 VLLWIKSVVDECGENVTTEQLKDYVWKTL-NSGKVVPGFGHGVLRKTDPRYTCQREFALKHL---PD-DPLFQLVSKLFE 385 (468)
Q Consensus 311 v~~~l~~i~~~ig~~~s~~~~~~~v~~~l-~~g~~IpGfGH~vyr~~DPRa~~L~~~a~~~~---~~-d~~~~la~~ie~ 385 (468)
|++||+++ + +++++++||++.+ ++|++||||||||||+.|||+++|+++++++. ++ +++++++.+||+
T Consensus 225 v~~ml~ei----~---~~~~~~~~v~~~l~~~~~~i~GfGHrvyk~~DPRa~~l~~~a~~l~~~~~~~~~~~~~a~~le~ 297 (377)
T 1o7x_A 225 AFKQFIEI----G---DPNRVQNWFNDKVVNQKNRLMGFGHRVYKTYDPRAKIFKKLALTLIERNADARRYFEIAQKLEE 297 (377)
T ss_dssp HHHHHHHH----C---SGGGHHHHHHHHTTTTCCCCTTBCCSSCSSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHh----C---ChhHHHHHHHHHHHhcCCcccCCCccccCCCCCchHHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 99999886 5 5689999999999 99999999999999999999999999999983 45 789999999999
Q ss_pred hhhhhHHhcCCCCCCCCchhhHHHHHHhccCCCccccchhhhhhhhhhhHHHHHHHHHHc-CCCcccCCccchhHH
Q 012206 386 VVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRAL-GLPLERPKSVTLDWI 460 (468)
Q Consensus 386 ~~~~~~~e~~k~k~l~pNvD~~sg~l~~~lGlp~~~~~t~lF~vsR~~GwlAH~ieq~~~-~~pi~RP~s~~~~~~ 460 (468)
++.+++ +.|+++||||||+|+++++||||. ++||+||++||++||+||++||+.+ + +|+||+++|+|.-
T Consensus 298 ~~~~~~----~~k~l~pNVD~~sg~v~~~lG~p~-~~~t~lF~i~R~~Gw~AH~~Eq~~~~~-~i~RP~~~Y~G~~ 367 (377)
T 1o7x_A 298 LGIKQF----SSKGIYPNTDFYSGIVFYALGFPV-YMFTALFALSRTLGWLAHIIEYVEEQH-RLIRPRALYVGPE 367 (377)
T ss_dssp HHHHHH----TTTTCCBCTTTTHHHHHHHHTCCG-GGHHHHHHHHHHHHHHHHHHHHHHHSC-CCCCCEEEECSCS
T ss_pred HHHHHH----hhcCCCCChHHHHHHHHHHhCCCh-hhhhhHHHHhhhccHHHHHHHHHhccC-CccCCcccccCCC
Confidence 997644 678999999999999999999996 9999999999999999999999999 6 8999999999863
No 12
>1vgm_A 378AA long hypothetical citrate synthase; open form, transferase; 2.00A {Sulfolobus tokodaii}
Probab=100.00 E-value=2.5e-98 Score=773.35 Aligned_cols=353 Identities=23% Similarity=0.335 Sum_probs=329.6
Q ss_pred cccccccceeeecceecCCCC-eeecCCCHHHHhhhCCCCCCCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHhhCCCc
Q 012206 74 GGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLSKELRDRATVP 152 (468)
Q Consensus 74 ~Glrg~~~~~t~iS~iD~~~G-i~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~~lp 152 (468)
+||+|+.+++|+||+||+++| ++||||+|+||+++. +||||+||||+|+|||++|+++|+++|..++.+|
T Consensus 7 ~Gl~gv~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~---------~fEeva~LL~~G~lP~~~el~~f~~~l~~~~~lp 77 (378)
T 1vgm_A 7 RGLENVIIKTTGLTYIDGINGILRYRGYDINDLVNYA---------SYEELIHLMLYGELPNRQQLNQIKGIINESFEVP 77 (378)
T ss_dssp GGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHHC---------CHHHHHHHHHHSSCCCHHHHHHHHHHHHTCCCCC
T ss_pred CccCCCeeeeeeceEEECCCCeEEEcCeeHHHHHhcC---------CHHHHHHHHHcCCCCCHHHHHHHHHHHHHccCCC
Confidence 699999999999999999999 699999999999985 5999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCChHHHHHHHHHHhcccchhhHHhhhccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHhcCCcccC
Q 012206 153 DYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIP 232 (468)
Q Consensus 153 ~~v~~~i~~lP~~~hPM~~l~~avsaL~~~s~f~~~y~~~~~k~~~~e~~~e~al~liA~~p~iaa~iyr~~~~~~~~~~ 232 (468)
+++.++++++|+++|||++|+++|++|+++ |++.. + |+..++++++|||++|+|+|++||+..++ ++++
T Consensus 78 ~~~~~~~~~~p~~~hpM~~l~~~v~~l~~~------~~~~~---~-~~~~~~~a~~Lia~~p~i~a~~y~~~~g~-~~i~ 146 (378)
T 1vgm_A 78 EQVISTIFSMPRNCDAIGMMETAFGILASI------YDPKW---N-RATNKELAVQIIAKTATITANIYRAKEGL-KPKI 146 (378)
T ss_dssp HHHHHHHTTSCTTSCHHHHHHHHHHHHHHH------HCCCC---C-TTTHHHHHHHHHHHHHHHHHHHHHHHTTC-CCCC
T ss_pred HHHHHHHHhCCCCCCcHHHHHHHHHHHhcc------CCccC---C-HHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CCCC
Confidence 999999999999999999999999999874 32221 2 89999999999999999999999988754 4788
Q ss_pred CCCCCCHHHHHHhhhCC--CChHHHHHHHHHHHHhcCCCCCCCchhHHHHhhccCCChHHHHHHHhhccccccccccHHH
Q 012206 233 KDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQE 310 (468)
Q Consensus 233 p~~~l~~~~nf~~ml~~--~~~~~~~~l~~~LvL~ADHeg~n~St~aarvvaSt~sd~y~avaAgl~aL~GplHGGA~e~ 310 (468)
|++++||++||++|+.+ +++..+++||++|||||||| +|+||||+|+++||++|+|+|++|||++|+||+||||||+
T Consensus 147 p~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg-~n~St~aaRv~aSt~~d~~savaagi~aL~GplHGGAne~ 225 (378)
T 1vgm_A 147 PEPSESYAESFLAATFGKKPTQEEIKAMDASLILYTDHE-VPASTTAALVASSTLSDMYSCIVAALAALKGPLHGGAAEE 225 (378)
T ss_dssp CCCCSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCS-CCHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTTSCHHHH
T ss_pred CCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccCC-CchHHHHHHHHHhcCCcHHHHHHHHHHhccCCCCCChHHH
Confidence 99999999999999965 78999999999999999998 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCChhhHHHHHHHHH-hCCCcccCcCCCCCCCCCccHHHHHHHHHhhC---C-CChHHHHHHHHHH
Q 012206 311 VLLWIKSVVDECGENVTTEQLKDYVWKTL-NSGKVVPGFGHGVLRKTDPRYTCQREFALKHL---P-DDPLFQLVSKLFE 385 (468)
Q Consensus 311 v~~~l~~i~~~ig~~~s~~~~~~~v~~~l-~~g~~IpGfGH~vyr~~DPRa~~L~~~a~~~~---~-~d~~~~la~~ie~ 385 (468)
|++||+++ + +++++++||++.+ ++|++||||||||||+.|||+++|+++++++. + ++++++++.+||+
T Consensus 226 v~~ml~ei----~---~~~~~~~~v~~~l~~~~~~i~GfGHrvyk~~DPRa~~L~~~a~~l~~~~~~~~~~~~~a~~le~ 298 (378)
T 1vgm_A 226 AFKQFVEI----G---SVENADKWFEEKIIKGKSRLMGFGHRVYKTYDPRAKIFKTLAKSFAEKNENVKKYYEIAERIEK 298 (378)
T ss_dssp HHHHHHHH----C---SGGGHHHHHHHHTTTSCCCCTTBCCSSCSSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHh----C---CHhHHHHHHHHHHHhcCCcccCCCCcccCCCCCchHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 99999886 5 5689999999999 99999999999999999999999999999873 4 5789999999999
Q ss_pred hhhhhHHhcCCCCCCCCchhhHHHHHHhccCCCccccchhhhhhhhhhhHHHHHHHHHHc-CCCcccCCccchhHH
Q 012206 386 VVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRAL-GLPLERPKSVTLDWI 460 (468)
Q Consensus 386 ~~~~~~~e~~k~k~l~pNvD~~sg~l~~~lGlp~~~~~t~lF~vsR~~GwlAH~ieq~~~-~~pi~RP~s~~~~~~ 460 (468)
++.+++ +.|+++||||||+|+++++||||. ++||+||++||++||+||++||+.+ + +|+||+++|+|.-
T Consensus 299 ~~~~~~----~~k~l~pNVDf~sg~i~~~lGip~-~~~t~lFaisR~~Gw~AH~~Eq~~~~~-~i~RP~~~Y~G~~ 368 (378)
T 1vgm_A 299 LGVDTF----GSKHIYPNTDFYSGIVFYALGFPI-YMFTSLFALSRVLGWLAHIIEYVEEQH-RLIRPRALYIGPE 368 (378)
T ss_dssp HHHHHH----GGGTCCBCTTTTHHHHHHHTTCCG-GGHHHHHHHHHHHHHHHHHHHHHHHSC-CCCCCEEEECSCC
T ss_pred HHHHHH----hhCCCCCChHHHHHHHHHHhCCCH-HhhhHHHHHHhhccHHHHHHHHHhccC-CccCcccccCCCC
Confidence 997644 568999999999999999999996 9999999999999999999999999 6 8999999999863
No 13
>1iom_A Citrate synthase; open form, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.50A {Thermus thermophilus} SCOP: a.103.1.1 PDB: 1ixe_A*
Probab=100.00 E-value=5.6e-98 Score=770.50 Aligned_cols=355 Identities=26% Similarity=0.391 Sum_probs=330.0
Q ss_pred cccccccceeeecceecCCCC-eeecCCCHHHHhhhCCCCCCCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHhhCCCc
Q 012206 74 GGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLSKELRDRATVP 152 (468)
Q Consensus 74 ~Glrg~~~~~t~iS~iD~~~G-i~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~~lp 152 (468)
+||+|+.+++|+||+||+++| ++||||+|+||++++ +||||+||||+|+|||++|+++|+++|..++.+|
T Consensus 5 ~Gl~gv~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~---------~fEeva~LLl~G~lPt~~el~~f~~~l~~~~~lp 75 (377)
T 1iom_A 5 RGLEGVLFTESRMCYIDGQQGKLYYYGIPIQELAEKS---------SFEETTFLLLHGRLPRRQELEEFSAALARRRALP 75 (377)
T ss_dssp GGGTTCCCSCCSSEEEETTTTEEEETTEEHHHHHHHC---------CHHHHHHHHHHSSCCCHHHHHHHHHHHHHTCSCC
T ss_pred cccCCCeeeeeeCeEEECCCCEEEEcCeeHHHHHccC---------CHHHHHHHHHCCCCcCHHHHHHHHHHHHHcCCCC
Confidence 799999999999999999999 699999999999986 5999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCChHHHHHHHHHHhcccchhhHHhhhccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHhcCCcccC
Q 012206 153 DYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKIIP 232 (468)
Q Consensus 153 ~~v~~~i~~lP~~~hPM~~l~~avsaL~~~s~f~~~y~~~~~k~~~~e~~~e~al~liA~~p~iaa~iyr~~~~~~~~~~ 232 (468)
+++.++|+++|+++|||++|+++|++|+++++. . .+.+|+..++++++|||++|+|+|++||+..++ ++++
T Consensus 76 ~~~~~~~~~~p~~~hpM~~l~~~v~~l~~~~~~-------~-~~~~~~~~~~~a~~Lia~~p~i~a~~y~~~~g~-~~i~ 146 (377)
T 1iom_A 76 AHLLESFKRYPVSAHPMSFLRTAVSEFGMLDPT-------E-GDISREALYEKGLDLIAKFATIVAANKRLKEGK-EPIP 146 (377)
T ss_dssp HHHHHHHTTSCTTSCHHHHHHHHHHHHHHTCTT-------T-TCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CCCC
T ss_pred HHHHHHHHhCCcCCCchhHHHHHHHHHhccCCC-------c-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CCCC
Confidence 999999999999999999999999999875321 1 133688899999999999999999999998754 4788
Q ss_pred CCCCCCHHHHHHhhhCC--CChHHHHHHHHHHHHhcCCCCCCCchhHHHHhhccCCChHHHHHHHhhccccccccccHHH
Q 012206 233 KDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQE 310 (468)
Q Consensus 233 p~~~l~~~~nf~~ml~~--~~~~~~~~l~~~LvL~ADHeg~n~St~aarvvaSt~sd~y~avaAgl~aL~GplHGGA~e~ 310 (468)
|++++||++||++|+++ +++..+++||++|||||||| +|+||||+|+++||++|+|+|++|||++|+||+||||||+
T Consensus 147 p~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg-~n~St~aaRv~aSt~~d~~savaagi~aL~GplHGGAne~ 225 (377)
T 1iom_A 147 PREDLSHAANFLYMANGVEPSPEQARLMDAALILHAEHG-FNASTFTAIAAFSTETDLYSAITAAVASLKGPRHGGANEA 225 (377)
T ss_dssp CCTTSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCS-SCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTSSCHHHH
T ss_pred CCCCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHhccCC-CCchHHHHHHHhhcCCcHHHHHHHHHHHcccCccCChhHH
Confidence 99999999999999965 78999999999999999998 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCChhhHHHHHHHHHhCCCcccCcCCCCCCCCCccHHHHHHHHHhhC---CCChHHHHHHHHHHhh
Q 012206 311 VLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHL---PDDPLFQLVSKLFEVV 387 (468)
Q Consensus 311 v~~~l~~i~~~ig~~~s~~~~~~~v~~~l~~g~~IpGfGH~vyr~~DPRa~~L~~~a~~~~---~~d~~~~la~~ie~~~ 387 (468)
|++||.++ + +++++++||++.+++|++||||||||||+.|||+++|+++++++. +++++++++.+||+++
T Consensus 226 v~~ml~ei----~---~~~~~~~~v~~~l~~~~~i~GfGHrvyk~~DPRa~~L~~~~~~l~~~~~~~~~~~~a~~le~~~ 298 (377)
T 1iom_A 226 VMRMIQEI----G---TPERAREWVREKLAKKERIMGMGHRVYKAFDPRAGVLEKLARLVAEKHGHSKEYQILKIVEEEA 298 (377)
T ss_dssp HHHHHHHH----C---SHHHHHHHHHHHHHTTCCCTTBSCSSCSSCCTTHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHh----c---CchhHHHHHHHHHHCCCcccCCCCcccCCCCCchHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 99999886 5 578999999999999999999999999999999999999999873 6789999999999998
Q ss_pred hhhHHhcCCCCCCCCchhhHHHHHHhccCCCccccchhhhhhhhhhhHHHHHHHHHHcCCCcccCCccchhH
Q 012206 388 PPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRALGLPLERPKSVTLDW 459 (468)
Q Consensus 388 ~~~~~e~~k~k~l~pNvD~~sg~l~~~lGlp~~~~~t~lF~vsR~~GwlAH~ieq~~~~~pi~RP~s~~~~~ 459 (468)
.+ +++ .|+++||||||+|+++++||||. ++||+||++||++||+||++||+..+.+|+||++.|+|.
T Consensus 299 ~~---~~~-~k~l~pNVD~~sg~i~~~lG~p~-~~~t~lF~i~R~~Gw~AH~~Eq~~~~~~i~RP~~~Y~G~ 365 (377)
T 1iom_A 299 GK---VLN-PRGIYPNVDFYSGVVYSDLGFSL-EFFTPIFAVARISGWVGHILEYQELDNRLLRPGAKYVGE 365 (377)
T ss_dssp HH---HHT-TTTCCBCHHHHHHHHHHHTTCCG-GGHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCCCSC
T ss_pred HH---Hhc-cCCCCCChHHHHHHHHHHcCCCH-HhhhhHHHHhccccHHHHHHHHHhhcCCcccccccccCC
Confidence 54 244 78999999999999999999996 999999999999999999999999334899999999985
No 14
>1aj8_A Citrate synthase; hyperthermostable, lyase; HET: COA CIT; 1.90A {Pyrococcus furiosus} SCOP: a.103.1.1
Probab=100.00 E-value=4e-98 Score=770.16 Aligned_cols=353 Identities=26% Similarity=0.371 Sum_probs=330.2
Q ss_pred cccccccceeeecceecCCCC-eeecCCCHHHHhhhCCCCCCCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHhhCCCc
Q 012206 74 GGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLSKELRDRATVP 152 (468)
Q Consensus 74 ~Glrg~~~~~t~iS~iD~~~G-i~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~~lp 152 (468)
+||+|+.+++|+||+||+++| ++||||+|+||++++ +||||+||||+|+|||++|+++|+++|..++.+|
T Consensus 3 ~Gl~g~~~~~t~Is~id~~~G~L~YRGy~i~~La~~~---------~fEeva~LLl~G~lP~~~el~~f~~~l~~~~~lp 73 (371)
T 1aj8_A 3 KGLEDVYIDQTNICYIDGKEGKLYYRGYSVEELAELS---------TFEEVVYLLWWGKLPSLSELENFKKELAKSRGLP 73 (371)
T ss_dssp GGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHHC---------CHHHHHHHHHHSSCCCHHHHHHHHHHHHTTCCCC
T ss_pred CCcCCCeeeeeeCeEEECCCCEEEEcCccHHHHHccC---------CHHHHHHHHHCCCCCCHHHHHHHHHHHHHccCCC
Confidence 799999999999999999999 699999999999986 5999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCChHHHHHHHHHHhcccchhhHHhhhccCCCC-CCCchHHHHHHHHHhhHHHHHHHHHHHhcCCccc
Q 012206 153 DYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSK-YWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKII 231 (468)
Q Consensus 153 ~~v~~~i~~lP~~~hPM~~l~~avsaL~~~s~f~~~y~~~~~k~~-~~e~~~e~al~liA~~p~iaa~iyr~~~~~~~~~ 231 (468)
+.+.++|+.+|+++|||++|+++|++|+++++ +. ++. +|+..++++++|||++|+|+|++||+..++ +++
T Consensus 74 ~~~~~~~~~~p~~~hpM~~l~~~v~~l~~~~~-------~~-~~~~~~~~~~~~a~~Lia~~p~i~a~~y~~~~g~-~~i 144 (371)
T 1aj8_A 74 KEVIEIMEALPKNTHPMGALRTIISYLGNIDD-------SG-DIPVTPEEVYRIGISVTAKIPTIVANWYRIKNGL-EYV 144 (371)
T ss_dssp HHHHHHHHHSCTTCCHHHHHHHHHHHHHHHST-------TT-TSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CCC
T ss_pred HHHHHHHHhCCCCCChHHHHHHHHHHHhccCC-------cc-cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CCC
Confidence 99999999999999999999999999987422 11 222 688999999999999999999999998754 478
Q ss_pred CCCCCCCHHHHHHhhhCC--CChHHHHHHHHHHHHhcCCCCCCCchhHHHHhhccCCChHHHHHHHhhccccccccccHH
Q 012206 232 PKDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQ 309 (468)
Q Consensus 232 ~p~~~l~~~~nf~~ml~~--~~~~~~~~l~~~LvL~ADHeg~n~St~aarvvaSt~sd~y~avaAgl~aL~GplHGGA~e 309 (468)
+|++++||++||++|+++ +++..+++||++|||||||| +|+||||+|+++||++|+|+|++|||++|+||+||||||
T Consensus 145 ~p~~~ls~~~nfl~ml~g~~p~~~~~~~ld~~Lvl~aDHg-~n~St~aarv~aSt~~d~~savaagi~aL~GplHGGAne 223 (371)
T 1aj8_A 145 PPKEKLSHAANFLYMLHGEEPPKEWEKAMDVALILYAEHE-INASTLAVMTVGSTLSDYYSAILAGIGALKGPIHGGAVE 223 (371)
T ss_dssp CCCTTSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCS-SCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHHH
T ss_pred CCCCCCCHHHHHHHHhcCCCCCHHHHHHHHHHHhHhcCCC-CChhHHHHHHHhhcCCcHHHHHHHHHHHcCCCccCCchH
Confidence 899999999999999965 78999999999999999998 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCCCcccCcCCCCCCCCCccHHHHHHHHHhhCCCChHHHHHHHHHHhhhh
Q 012206 310 EVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHLPDDPLFQLVSKLFEVVPP 389 (468)
Q Consensus 310 ~v~~~l~~i~~~ig~~~s~~~~~~~v~~~l~~g~~IpGfGH~vyr~~DPRa~~L~~~a~~~~~~d~~~~la~~ie~~~~~ 389 (468)
+|++||.++ + +++++++||++.+++|++||||||||||+.|||+++|+++++++ +++++++++.+||+++.
T Consensus 224 ~v~~~l~~i----~---~~~~~~~~v~~~l~~~~~i~GfGHrvyk~~DPRa~~l~~~~~~~-~~~~~~~~a~~le~~~~- 294 (371)
T 1aj8_A 224 EAIKQFMEI----G---SPEKVEEWFFKALQQKRKIMGAGHRVYKTYDPRARIFKKYASKL-GDKKLFEIAERLERLVE- 294 (371)
T ss_dssp HHHHHHHHH----C---SGGGHHHHHHHHHHHTCCCTTBCCSSCSSCCHHHHHHHHHHHHH-SCHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHh----c---CchhHHHHHHHHHHcCCeeecCCccccCCCCccHHHHHHHHHHc-CCCHHHHHHHHHHHHHH-
Confidence 999999886 5 56889999999999999999999999999999999999999998 67899999999999973
Q ss_pred hHHhcCCCCCCCCchhhHHHHHHhccCCCccccchhhhhhhhhhhHHHHHHHHHHcCCCcccCCccchhH
Q 012206 390 ILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRALGLPLERPKSVTLDW 459 (468)
Q Consensus 390 ~~~e~~k~k~l~pNvD~~sg~l~~~lGlp~~~~~t~lF~vsR~~GwlAH~ieq~~~~~pi~RP~s~~~~~ 459 (468)
++++.|+++||||||+|+++++||||. ++||+||++||++||+||++||+..+ +|+||++.|+|.
T Consensus 295 ---~~~~~k~l~pNVD~~sg~i~~~lGip~-~~~t~lF~i~R~~Gw~AH~~Eq~~~~-~i~RP~~~Y~G~ 359 (371)
T 1aj8_A 295 ---EYLSKKGISINVDYWSGLVFYGMKIPI-ELYTTIFAMGRIAGWTAHLAEYVSHN-RIIRPRLQYVGE 359 (371)
T ss_dssp ---HHTTTTTCCBCTTTTHHHHHHTTTCCG-GGHHHHHHHHHHHHHHHHHHHHHTTC-CCCCCEEEECSC
T ss_pred ---HhccCCCCCCChHHHHHHHHHHcCCCH-HhhhhHHHHhccccHHHHHHHHHhcC-CccCchhhccCC
Confidence 466789999999999999999999996 99999999999999999999999988 699999999985
No 15
>2ifc_A Citrate synthase; oxaloacetate, EC 2.3.3.1, transferase; 1.70A {Thermoplasma acidophilum} PDB: 2r9e_A* 2r26_A*
Probab=100.00 E-value=3.9e-98 Score=773.52 Aligned_cols=356 Identities=23% Similarity=0.344 Sum_probs=331.6
Q ss_pred cccccccccceeeecceecCCCC-eeecCCCHHHHhh-hCCCCCCCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHhhC
Q 012206 72 VIGGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQK-LLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLSKELRDRA 149 (468)
Q Consensus 72 ~~~Glrg~~~~~t~iS~iD~~~G-i~yRGy~I~eL~~-~~p~~~~~~~~~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~ 149 (468)
+.+||+|+.+++|+||+||+++| ++||||+|+||++ +. +||||+||||+|+|||++|+++|+++|..++
T Consensus 7 ~~~Gl~g~~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~~---------~fEeva~LLl~G~lPt~~el~~f~~~l~~~~ 77 (385)
T 2ifc_A 7 ISKGLEDVNIKWTRLTTIDGNKGILRYGGYSVEDIIASGA---------QDEEIQYLFLYGNLPTEQELRKYKETVQKGY 77 (385)
T ss_dssp BCGGGTTCEEEEESSEEEETTTTEEEETTEEHHHHHHTTC---------CHHHHHHHHHHSSCCCHHHHHHHHHHHHGGG
T ss_pred CCCCcCCCeeeeeeCeEEECCCCEEEECCccHHHHHhcCC---------CHHHHHHHHHCCCCcCHHHHHHHHHHHHHcc
Confidence 44899999999999999999999 6999999999999 64 5999999999999999999999999999999
Q ss_pred CCcHHHHHHHHcCCCCCChHHHHHHHHHHhcccchhhHHhhhccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHhcCCc
Q 012206 150 TVPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGK 229 (468)
Q Consensus 150 ~lp~~v~~~i~~lP~~~hPM~~l~~avsaL~~~s~f~~~y~~~~~k~~~~e~~~e~al~liA~~p~iaa~iyr~~~~~~~ 229 (468)
.+|+.+.++++.+|+++|||++|+++|++|+++ |++. +++|+..++++++|||++|+|+|++||+..++ +
T Consensus 78 ~lp~~~~~~~~~~p~~~hpM~~l~~~v~~l~~~------~~~~---~~~~~~~~~~a~~Lia~~p~i~a~~y~~~~g~-~ 147 (385)
T 2ifc_A 78 KIPDFVINAIRQLPRESDAVAMQMAAVAAMAAS------ETKF---KWNKDTDRDVAAEMIGRMSAITVNVYRHIMNM-P 147 (385)
T ss_dssp CCCHHHHHHHHTSCTTSCHHHHHHHHHHHHHHH------CTTC---CCCTTTHHHHHHHHHHHHHHHHHHHHHHHTTC-C
T ss_pred CCCHHHHHHHHhCCCCCCchHHHHHHHHHHHhc------CCcc---cCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-C
Confidence 999999999999999999999999999999874 3322 24799999999999999999999999988754 4
Q ss_pred ccCCCCCCCHHHHHHhhhCC--CChHHHHHHHHHHHHhcCCCCCCCchhHHHHhhccCCChHHHHHHHhhcccccccccc
Q 012206 230 IIPKDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLA 307 (468)
Q Consensus 230 ~~~p~~~l~~~~nf~~ml~~--~~~~~~~~l~~~LvL~ADHeg~n~St~aarvvaSt~sd~y~avaAgl~aL~GplHGGA 307 (468)
+++|++++||++||++|+++ +++.++++||++|||||||| +|+||||+|+++||++|+|+|++|||++|+||+||||
T Consensus 148 ~i~p~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg-~n~St~aarv~aSt~~d~~savaagi~aL~GplHGGA 226 (385)
T 2ifc_A 148 AELPKPSDSYAESFLNAAFGRKATKEEIDAMNTALILYTDHE-VPASTTAGLVAVSTLSDMYSGITAALAALKGPLHGGA 226 (385)
T ss_dssp CCCCCCCSCHHHHHHHHHHTSCCCHHHHHHHHHHHHHTSCCS-SCHHHHHHHHHHTTTCCHHHHHHHHHHHHTSTTTSSH
T ss_pred CCCCCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHhHhcCCC-ccHHHHHHHHHHhcCCcHHHHHHHHHHHccCCccCCh
Confidence 78899999999999999976 78999999999999999998 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCChhhHHHHHHHHH-hCCCcccCcCCCCCCCCCccHHHHHHHHHhh----CCCChHHHHHHH
Q 012206 308 NQEVLLWIKSVVDECGENVTTEQLKDYVWKTL-NSGKVVPGFGHGVLRKTDPRYTCQREFALKH----LPDDPLFQLVSK 382 (468)
Q Consensus 308 ~e~v~~~l~~i~~~ig~~~s~~~~~~~v~~~l-~~g~~IpGfGH~vyr~~DPRa~~L~~~a~~~----~~~d~~~~la~~ 382 (468)
||+|++||+++ + +++++++||++.+ ++|++||||||||||+.|||+++|+++++++ .+++++++++.+
T Consensus 227 ne~v~~ml~ei----~---~~~~~~~~i~~~l~~~~~~i~GfGHrvyk~~DPRa~~L~~~a~~l~~~~~~~~~~~~~a~~ 299 (385)
T 2ifc_A 227 AEAAIAQFDEI----K---DPAMVEKWFNDNIINGKKRLMGFGHRVYKTYDPRAKIFKGIAEKLSSKKPEVHKVYEIATK 299 (385)
T ss_dssp HHHHHHHHHHH----C---SGGGHHHHHHHHTTTSSSCCTTBCCSSCSSCCHHHHHHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh----C---CHHHHHHHHHHHHHhcCCcccCCCCcccCCCCCchHHHHHHHHHHHHhhcCCCHHHHHHHH
Confidence 99999999886 5 5689999999999 9999999999999999999999999999998 346899999999
Q ss_pred HHHhhhhhHHhcCCCCCCCCchhhHHHHHHhccCCCcc--ccchhhhhhhhhhhHHHHHHHHHHc-CCCcccCCccchhH
Q 012206 383 LFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEA--RYYTVLFGVSRSLGICSQLIWDRAL-GLPLERPKSVTLDW 459 (468)
Q Consensus 383 ie~~~~~~~~e~~k~k~l~pNvD~~sg~l~~~lGlp~~--~~~t~lF~vsR~~GwlAH~ieq~~~-~~pi~RP~s~~~~~ 459 (468)
||+++.+++ +.|++|||||||+|+++++|||| . ++||+||++||++||+||++||+.+ + +|+||+++|+|.
T Consensus 300 le~~~~~~~----~~k~l~pNVD~~sg~v~~~lGip-~~~~~~t~lF~isR~~Gw~AH~~Eq~~~~~-~i~RP~~~Y~G~ 373 (385)
T 2ifc_A 300 LEDFGIKAF----GSKGIYPNTDYFSGIVYMSIGFP-LRNNIYTALFALSRVTGWQAHFIEYVEEQQ-RLIRPRAVYVGP 373 (385)
T ss_dssp HHHHHHHHH----GGGTCCBCTTTTHHHHHHHHTCC-SGGGHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCEEEECSC
T ss_pred HHHHHHHHH----hhcCCCCChHHHHHHHHHHcCCC-cchhhhhhHHHHhhcccHHHHHHHHHhccC-CccCcccccCCC
Confidence 999997644 56899999999999999999998 6 8999999999999999999999999 7 899999999986
Q ss_pred H
Q 012206 460 I 460 (468)
Q Consensus 460 ~ 460 (468)
-
T Consensus 374 ~ 374 (385)
T 2ifc_A 374 A 374 (385)
T ss_dssp C
T ss_pred c
Confidence 3
No 16
>1a59_A Citrate synthase; cold-activity; HET: COA CIT; 2.09A {Antarctic bacterium ds2-3r} SCOP: a.103.1.1
Probab=100.00 E-value=5.6e-98 Score=771.50 Aligned_cols=359 Identities=25% Similarity=0.337 Sum_probs=329.8
Q ss_pred cccccccccceeeecceecCCCC-eeecCCCHHHHhhhCCCCCCCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHhhCC
Q 012206 72 VIGGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLSKELRDRAT 150 (468)
Q Consensus 72 ~~~Glrg~~~~~t~iS~iD~~~G-i~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~~ 150 (468)
+.+||+|+++++|+||+||+++| ++||||+|+||++++ +||||+||||+|+|||++|+++|+++|..++.
T Consensus 5 ~~~Gl~gv~~~~t~Is~id~~~G~L~YRGy~i~dLa~~~---------~fEeva~LLl~G~lP~~~el~~f~~~l~~~~~ 75 (378)
T 1a59_A 5 IHKGLAGVTADVTAISKVNSDTNSLLYRGYPVQELAAKC---------SFEQVAYLLWNSELPNDSELKAFVNFERSHRK 75 (378)
T ss_dssp CCGGGTTCCCCCCSSEEEETTTTEEEETTEEHHHHHHHC---------CHHHHHHHHHHSSCCCHHHHHHHHHHHHTSCS
T ss_pred CCCccCCCeeeeeeceEEECCCCeEEEcCccHHHHHhcC---------CHHHHHHHHHcCCCCCHHHHHHHHHHHHHcCC
Confidence 44799999999999999999999 699999999999986 59999999999999999999999999999999
Q ss_pred CcHHHHHHHHcCCCCCChHHHHHHHHHHhcccchhhHHhhhccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHhcCCcc
Q 012206 151 VPDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKI 230 (468)
Q Consensus 151 lp~~v~~~i~~lP~~~hPM~~l~~avsaL~~~s~f~~~y~~~~~k~~~~e~~~e~al~liA~~p~iaa~iyr~~~~~~~~ 230 (468)
+|+++.++|+++|+++|||++|+++|++|+++++. . .+.+|+..++++++|||++|+|+|++||+.+++ ++
T Consensus 76 lp~~~~~~~~~~p~~~hpM~~l~~~v~~l~~~~~~-------~-~~~~~~~~~~~a~~Lia~~p~i~a~~y~~~~g~-~~ 146 (378)
T 1a59_A 76 LDENVKGAIDLLSTACHPMDVARTAVSVLGANHAR-------A-QDSSPEANLEKAMSLLATFPSVVAYDQRRRRGE-EL 146 (378)
T ss_dssp CCHHHHHHHTTSCTTSCHHHHHHHHHHHHHHTCTT-------T-TCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTC-CC
T ss_pred CCHHHHHHHHhCCCCCCcHHHHHHHHHHHHhcCCC-------c-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCC-CC
Confidence 99999999999999999999999999999875321 1 133688999999999999999999999998754 47
Q ss_pred cCCCCCCCHHHHHHhhhCC--CChHHHHHHHHHHHHhcCCCCCCCchhHHHHhhccCCChHHHHHHHhhccccccccccH
Q 012206 231 IPKDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLAN 308 (468)
Q Consensus 231 ~~p~~~l~~~~nf~~ml~~--~~~~~~~~l~~~LvL~ADHeg~n~St~aarvvaSt~sd~y~avaAgl~aL~GplHGGA~ 308 (468)
++|++++||++||++|+++ +++.++++||++|||||||| +|+||||+|+++||++|+|+|++|||++|+||+|||||
T Consensus 147 i~p~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg-~n~St~aarv~aSt~~d~~savaagi~aL~GplHGGAn 225 (378)
T 1a59_A 147 IEPREDLDYSANFLWMTFGEEAAPEVVEAFNVSMILYAEHS-FNASTFTARVITSTLADLHSAVTGAIGALKGPLHGGAN 225 (378)
T ss_dssp CCCCTTSCHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCS-SCHHHHHHHHHHTTTCCHHHHHHHHHHHHHSTTTTTHH
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHhcCCC-CCchHHHHHHHhhcCCcHHHHHHHHHHHccCCccCCch
Confidence 8899999999999999976 78999999999999999998 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCC---hhhHHHHHHHHHhCCCcccCcCCCCCCCCCccHHHHHHHHHhhC---CCChHHHHHHH
Q 012206 309 QEVLLWIKSVVDECGENVT---TEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHL---PDDPLFQLVSK 382 (468)
Q Consensus 309 e~v~~~l~~i~~~ig~~~s---~~~~~~~v~~~l~~g~~IpGfGH~vyr~~DPRa~~L~~~a~~~~---~~d~~~~la~~ 382 (468)
|+|++||.++.+. |++.+ ++++++||++.+++|++||||||||||+.|||+++|+++++++. +++++++++.+
T Consensus 226 e~v~~~l~~i~~~-~~~~~~~~~~~~~~~v~~~l~~~~~i~GfGHrvyk~~DPRa~~l~~~a~~~~~~~~~~~~~~~a~~ 304 (378)
T 1a59_A 226 EAVMHTFEEIGIR-KDESLDEAATRSKAWMVDALAQKKKVMGFGHRVYKNGDSRVPTMKSALDAMIKHYDRPEMLGLYNG 304 (378)
T ss_dssp HHHHHHHHHSCCC-SSCCHHHHHHHHHHHHHHHHHTTCCCTTBCCSSCSSCCTTHHHHHHHHHHHHHHTTCTHHHHHHHH
T ss_pred HHHHHHHHHHhhc-CCccccchHHHHHHHHHHHHhCCCeeeCCCCcccCCCCCcHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 9999999987432 22111 27899999999999999999999999999999999999999873 67899999999
Q ss_pred HHHhhhhhHHhcCCCCCCCCchhhHHHHHHhccCCCccccchhhhhhhhhhhHHHHHHHHHHcCCCcccCCccchhH
Q 012206 383 LFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRALGLPLERPKSVTLDW 459 (468)
Q Consensus 383 ie~~~~~~~~e~~k~k~l~pNvD~~sg~l~~~lGlp~~~~~t~lF~vsR~~GwlAH~ieq~~~~~pi~RP~s~~~~~ 459 (468)
||+++.+ .|+++||||||+|+++++||||. ++||+||++||++||+||++||+..+ +|+||++.|+|.
T Consensus 305 le~~~~~-------~k~l~pNVD~~sg~i~~~lGip~-~~~t~lF~isR~~Gw~AH~~Eq~~~~-~i~RP~~~Y~G~ 372 (378)
T 1a59_A 305 LEAAMEE-------AKQIKPNLDYPAGPTYNLMGFDT-EMFTPLFIAARITGWTAHIMEQVADN-ALIRPLSEYNGP 372 (378)
T ss_dssp HHHHHHH-------HHCCCBCTHHHHHHHHHHTTCCG-GGHHHHHHHHHHHHHHHHHHHHHHTC-CCCCCCCCCCSC
T ss_pred HHHHHHH-------HhCCCCChHHHHHHHHHHhCCCh-hhcchhhhhhcchhHHHHHHHHHhcC-CCcCchhhccCC
Confidence 9999854 27999999999999999999996 99999999999999999999999988 699999999985
No 17
>1vgp_A 373AA long hypothetical citrate synthase; open form, transferase; 2.70A {Sulfolobus tokodaii}
Probab=100.00 E-value=5.6e-98 Score=769.93 Aligned_cols=351 Identities=27% Similarity=0.409 Sum_probs=327.7
Q ss_pred ccccccccceeeecceecCCCC-eeecCCCHHHHhhhCCCCCCCCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHhhCCC
Q 012206 73 IGGMRGMTGLLWETSLLDPDEG-IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWLLLTGKVPSKEQVDGLSKELRDRATV 151 (468)
Q Consensus 73 ~~Glrg~~~~~t~iS~iD~~~G-i~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~~l 151 (468)
.+||+|+.+++|+||+||+++| ++||||+|+||++++ +||||+||||+|+|||++|+++|+++|..++.+
T Consensus 4 ~~Gl~g~~~~~t~Is~id~~~G~L~YRGy~i~~La~~~---------~fEeva~LLl~G~lPt~~el~~f~~~l~~~~~l 74 (373)
T 1vgp_A 4 KKGLEDVYVKETEITYIDGELGRLYYRGYSIYDLAEFS---------NFEEVSYLILYGKLPNREELNWFQEKLREERYL 74 (373)
T ss_dssp CTTCTTCCCCCCSSEEEETTTTEEEETTEEHHHHHHHC---------CHHHHHHHHHHSSCCCHHHHHHHHHHHHHTCCC
T ss_pred CCccCCCeeeeeeCeEEECCCCEEEEcCeeHHHHHccC---------CHHHHHHHHHCCCCcCHHHHHHHHHHHHHccCC
Confidence 4799999999999999999999 699999999999986 599999999999999999999999999999999
Q ss_pred cHHHHHHHHcCCCCCChHHHHHHHHHHhcccchhhHHhhhccCCCCCCCchHHHHHHHHHhhHHHHHHHHHHHhcCCccc
Q 012206 152 PDYVYKAIDALPVTAHPMTQFASGVMALQVQSEFQEAYEKGIHKSKYWEPTYEDSLNLIARVPVVAAYVYQRIYKDGKII 231 (468)
Q Consensus 152 p~~v~~~i~~lP~~~hPM~~l~~avsaL~~~s~f~~~y~~~~~k~~~~e~~~e~al~liA~~p~iaa~iyr~~~~~~~~~ 231 (468)
|+++.++|+.+|+++|||++|+++|++|++++ . . + |+..++++++|||++|+|+|++||+..++ +++
T Consensus 75 p~~~~~~~~~~p~~~hpM~~l~~~v~~l~~~~-------~-~---~-~~~~~~~a~~Lia~~p~i~a~~y~~~~g~-~~i 141 (373)
T 1vgp_A 75 PDFIIKFLREVRKDAQPMDILRTAVSLLGIED-------S-K---N-DERTDIKGIKLISKFPTIVANYARLRKGL-DII 141 (373)
T ss_dssp CHHHHHHHHHSCTTSCHHHHHHHHHHHHHHHC-------C-C---C-SSCHHHHHHHHHHHHHHHHHHHHHHHTTC-CCC
T ss_pred CHHHHHHHHhCCCCCChHHHHHHHHHHHhccC-------C-C---C-hHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCC
Confidence 99999999999999999999999999998732 1 1 2 88999999999999999999999988754 478
Q ss_pred CCCCCCCHHHHHHhhhCC--CChHHHHHHHHHHHHhcCCCCCCCchhHHHHhhccCCChHHHHHHHhhccccccccccHH
Q 012206 232 PKDDSLDYGGNFSHMLGF--DDPKMLELMRLYVTIHSDHEGGNVSAHTGHLVASALSDPYLSFAAALNGLAGPLHGLANQ 309 (468)
Q Consensus 232 ~p~~~l~~~~nf~~ml~~--~~~~~~~~l~~~LvL~ADHeg~n~St~aarvvaSt~sd~y~avaAgl~aL~GplHGGA~e 309 (468)
+|++++||++||++|+++ +++..+++||++|||||||| +|+||||+|+++||++|+|+|++|||++|+||+||||||
T Consensus 142 ~p~~~ls~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg-~n~ST~aaRv~aSt~ad~~savaagi~aL~GplHGGAne 220 (373)
T 1vgp_A 142 EPDPKLSHSENFLYMLYGDRPNEIKSKAMDVTLILHIDHE-MNASTFASLVVASTFSDLYSSIVAGISALKGPLHGGANY 220 (373)
T ss_dssp CCCTTSCHHHHHHHHHHSSCCCHHHHHHHHHHHHTTSCCS-CCHHHHHHHHHHTTTCCHHHHHHHHHHHHTCTTSSSCCC
T ss_pred CCCCCCCHHHHHHHHhcCCCCCHHHHHHHHHHHHHhccCC-CchHHHHHHHHHhcCccHHHHHHHHHHhcCCCCcCCHHH
Confidence 899999999999999965 78999999999999999998 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCChhhHHHHHHHHHhCCCcccCcCCCCCCCCCccHHHHHHHHHhhC---CCC--hHHHHHHHHH
Q 012206 310 EVLLWIKSVVDECGENVTTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDPRYTCQREFALKHL---PDD--PLFQLVSKLF 384 (468)
Q Consensus 310 ~v~~~l~~i~~~ig~~~s~~~~~~~v~~~l~~g~~IpGfGH~vyr~~DPRa~~L~~~a~~~~---~~d--~~~~la~~ie 384 (468)
+|++||+++ + +++++++||++.+++|++||||||||||+.|||+++|+++++++. +.+ ++++++.+||
T Consensus 221 ~v~~ml~~i----~---~~~~~~~~i~~~l~~~~~i~GfGHrvyk~~DPRa~~L~~~~~~l~~~~~~~~~~~~~~a~~le 293 (373)
T 1vgp_A 221 EALKMFKEI----G---SPEKVNDYILNRLSNKQRIMGFGHRVYKTYDPRARILKQYAKLLAEKEGGEIYTLYQIAEKVE 293 (373)
T ss_dssp HHHHHHHHS----C---SSSSHHHHHHHHHHTTCCCTTBCCSSCSSCCHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHh----c---CchhHHHHHHHHHHcCCcccCCCccccCCCCCchHHHHHHHHHHHHHcCCcchHHHHHHHHHH
Confidence 999999875 5 457899999999999999999999999999999999999999873 555 8999999999
Q ss_pred HhhhhhHHhcCCCCCCCCchhhHHHHHHhccCCCccccchhhhhhhhhhhHHHHHHHHHHcCCCcccCCccchhH
Q 012206 385 EVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRALGLPLERPKSVTLDW 459 (468)
Q Consensus 385 ~~~~~~~~e~~k~k~l~pNvD~~sg~l~~~lGlp~~~~~t~lF~vsR~~GwlAH~ieq~~~~~pi~RP~s~~~~~ 459 (468)
+++.+ +++.|+++||||||+|+++++||||. ++||+||++||++||+||++||+..+ +|+||++.|+|.
T Consensus 294 ~~~~~----~~~~k~l~pNVDf~sg~i~~~lGip~-~~~t~lFaisR~~Gw~AH~~Eq~~~~-~i~RP~~~Y~G~ 362 (373)
T 1vgp_A 294 EIGIK----YLGPKGIYPNVDFFSSIVFYSLGFEP-DFFPAVFASARVVGWVAHIMEYIKDN-KIIRPKAYYKGE 362 (373)
T ss_dssp HHHHH----HHGGGTCCBCHHHHHHHHHHHTTCCG-GGHHHHHHHHHHHHHHHHHHHHGGGC-CCCCCCCCCCSC
T ss_pred HHHHH----hcccCCCCCChHHHHHHHHHHcCCCH-HhhhhhHHhhccccHHHHHHHHHhcC-CCcCccccccCC
Confidence 99743 45678999999999999999999996 99999999999999999999999988 699999999985
No 18
>3tqg_A 2-methylcitrate synthase; energy metabolism, transferase; 2.30A {Coxiella burnetii} SCOP: a.103.1.0
Probab=44.18 E-value=58 Score=33.05 Aligned_cols=62 Identities=16% Similarity=0.187 Sum_probs=48.2
Q ss_pred CCHHHHHHHHHhCCCCCHHHHHHHHHHHHhhCC--CcH--HHHHHHHcCCCCCChHHHHHHHHHHhcc
Q 012206 118 PLPEGLLWLLLTGKVPSKEQVDGLSKELRDRAT--VPD--YVYKAIDALPVTAHPMTQFASGVMALQV 181 (468)
Q Consensus 118 ~~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~~--lp~--~v~~~i~~lP~~~hPM~~l~~avsaL~~ 181 (468)
-++-+.+|++|+|+.|++.+.+.|..-|.-+.+ +.. +...+..+- -++|-..+++|+.+|..
T Consensus 153 ls~a~nfl~ml~g~~p~~~~~~~ld~~Lil~ADHe~n~St~tarvvaSt--~ad~ysavaagi~aL~G 218 (375)
T 3tqg_A 153 LTLAGYFLHLLLGKKAAQMAIDCMNASLILYAEHEFNASTFAARVCSAT--LSDIYSAVTAAIATLRG 218 (375)
T ss_dssp SSHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHTT--TCCHHHHHHHHHHHHTS
T ss_pred ccHHHHHHHHhcCCCCCHHHHHHHHHHHHHhccCCCCHHHHHHHHHHcc--CCCHHHHHHHHHHhccC
Confidence 468899999999999999999999998766642 333 455566554 47899999999999843
No 19
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=35.23 E-value=34 Score=33.70 Aligned_cols=44 Identities=16% Similarity=0.092 Sum_probs=37.6
Q ss_pred ChhhHHHHHHHHHhCCCcccCcCCCCCCCCCc-cHHHHHHHHHhh
Q 012206 327 TTEQLKDYVWKTLNSGKVVPGFGHGVLRKTDP-RYTCQREFALKH 370 (468)
Q Consensus 327 s~~~~~~~v~~~l~~g~~IpGfGH~vyr~~DP-Ra~~L~~~a~~~ 370 (468)
+++++++.+.+.++.|.-|.+-||-+...++| ..+++.+.++++
T Consensus 302 ~~e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey 346 (348)
T 4ay7_A 302 PVDKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEF 346 (348)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHh
Confidence 57889999999999999999999999998888 577777777765
No 20
>3o8j_A 2-methylcitrate synthase; short chain fatty acids, propionate metabolism, 2-methylcitr cycle, PRPC or 2-MCS, GLTA or CS, 2-methy synthase; 2.41A {Salmonella enterica}
Probab=34.85 E-value=1.1e+02 Score=31.37 Aligned_cols=61 Identities=16% Similarity=0.189 Sum_probs=47.4
Q ss_pred CCHHHHHHHHHhCCCCCHHHHHHHHHHHHhhC--CCcH--HHHHHHHcCCCCCChHHHHHHHHHHhc
Q 012206 118 PLPEGLLWLLLTGKVPSKEQVDGLSKELRDRA--TVPD--YVYKAIDALPVTAHPMTQFASGVMALQ 180 (468)
Q Consensus 118 ~~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~--~lp~--~v~~~i~~lP~~~hPM~~l~~avsaL~ 180 (468)
-++-+.+|.+|+|+.|++++.+.|..-|.-+. .+.. +...+..+- -++|-..+++|+.+|.
T Consensus 182 ls~a~nfl~ml~g~~p~~~~~~~ld~~LiLhADHe~N~St~taRvvaSt--~ad~ysavaagi~aL~ 246 (404)
T 3o8j_A 182 DSIGGHFLHLLHGEKPTQSWEKAMHISLVLYAEHEFNASTFTSRVIAGT--GSDVYSAIIGAIGALR 246 (404)
T ss_dssp SSHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCSSSHHHHHHHHHHTT--TCCHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHhcCCCCCHHHHHHHHHHHhhccCCCCChHHHHHHHHHhc--CCCHHHHHHHHHHHcc
Confidence 46789999999999999999999999887665 2333 455566554 4679999999999984
No 21
>1a59_A Citrate synthase; cold-activity; HET: COA CIT; 2.09A {Antarctic bacterium ds2-3r} SCOP: a.103.1.1
Probab=34.31 E-value=99 Score=31.25 Aligned_cols=59 Identities=14% Similarity=0.119 Sum_probs=45.9
Q ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHhhCC--CcH--HHHHHHHcCCCCCChHHHHHHHHHHh
Q 012206 119 LPEGLLWLLLTGKVPSKEQVDGLSKELRDRAT--VPD--YVYKAIDALPVTAHPMTQFASGVMAL 179 (468)
Q Consensus 119 ~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~~--lp~--~v~~~i~~lP~~~hPM~~l~~avsaL 179 (468)
++-+.++++++|+.|++.+.+.|..-|.-+.+ +.. +...++.+ ..++|-..+++|+++|
T Consensus 154 s~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~St~aarv~aS--t~~d~~savaagi~aL 216 (378)
T 1a59_A 154 DYSANFLWMTFGEEAAPEVVEAFNVSMILYAEHSFNASTFTARVITS--TLADLHSAVTGAIGAL 216 (378)
T ss_dssp CHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHT--TTCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHhcCCCCCchHHHHHHHhh--cCCcHHHHHHHHHHHc
Confidence 47789999999999999999999988866642 333 34445554 3478999999999999
No 22
>1aj8_A Citrate synthase; hyperthermostable, lyase; HET: COA CIT; 1.90A {Pyrococcus furiosus} SCOP: a.103.1.1
Probab=33.55 E-value=1e+02 Score=31.03 Aligned_cols=60 Identities=17% Similarity=0.205 Sum_probs=45.8
Q ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHhhCC--CcH--HHHHHHHcCCCCCChHHHHHHHHHHhc
Q 012206 119 LPEGLLWLLLTGKVPSKEQVDGLSKELRDRAT--VPD--YVYKAIDALPVTAHPMTQFASGVMALQ 180 (468)
Q Consensus 119 ~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~~--lp~--~v~~~i~~lP~~~hPM~~l~~avsaL~ 180 (468)
++-+.++++++|+.|++.+.+.|..-|.-+.+ +.. +...++.+ ..++|-..+++|+.+|.
T Consensus 151 s~~~nfl~ml~g~~p~~~~~~~ld~~Lvl~aDHg~n~St~aarv~aS--t~~d~~savaagi~aL~ 214 (371)
T 1aj8_A 151 SHAANFLYMLHGEEPPKEWEKAMDVALILYAEHEINASTLAVMTVGS--TLSDYYSAILAGIGALK 214 (371)
T ss_dssp CHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHT--TTCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHhHhcCCCCChhHHHHHHHhh--cCCcHHHHHHHHHHHcC
Confidence 47789999999999999999999988866642 333 34445544 34789899999999983
No 23
>1iom_A Citrate synthase; open form, riken structural genomics/proteomics in RSGI, structural genomics, lyase; 1.50A {Thermus thermophilus} SCOP: a.103.1.1 PDB: 1ixe_A*
Probab=33.09 E-value=1.1e+02 Score=31.03 Aligned_cols=60 Identities=17% Similarity=0.141 Sum_probs=45.9
Q ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHhhCC--CcH--HHHHHHHcCCCCCChHHHHHHHHHHhc
Q 012206 119 LPEGLLWLLLTGKVPSKEQVDGLSKELRDRAT--VPD--YVYKAIDALPVTAHPMTQFASGVMALQ 180 (468)
Q Consensus 119 ~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~~--lp~--~v~~~i~~lP~~~hPM~~l~~avsaL~ 180 (468)
++-+.++++++|+.|++.+.+.|..-|.-+.+ +.. ....++.+ ..++|-..+++|+++|.
T Consensus 152 s~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~St~aaRv~aS--t~~d~~savaagi~aL~ 215 (377)
T 1iom_A 152 SHAANFLYMANGVEPSPEQARLMDAALILHAEHGFNASTFTAIAAFS--TETDLYSAITAAVASLK 215 (377)
T ss_dssp CHHHHHHHHHHSSCCCHHHHHHHHHHHHHHSCCSSCHHHHHHHHHHT--TTCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHhccCCCCchHHHHHHHhh--cCCcHHHHHHHHHHHcc
Confidence 47789999999999999999999988866652 333 34445544 34789999999999983
No 24
>2ifc_A Citrate synthase; oxaloacetate, EC 2.3.3.1, transferase; 1.70A {Thermoplasma acidophilum} PDB: 2r9e_A* 2r26_A*
Probab=32.93 E-value=1.2e+02 Score=30.69 Aligned_cols=60 Identities=15% Similarity=0.127 Sum_probs=45.7
Q ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHhhC--CCcHH--HHHHHHcCCCCCChHHHHHHHHHHhc
Q 012206 119 LPEGLLWLLLTGKVPSKEQVDGLSKELRDRA--TVPDY--VYKAIDALPVTAHPMTQFASGVMALQ 180 (468)
Q Consensus 119 ~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~--~lp~~--v~~~i~~lP~~~hPM~~l~~avsaL~ 180 (468)
++-+.++++++|+.|++.+.+.|..-|.-+. .+... ...++.+ ..++|-..+++|+++|.
T Consensus 156 s~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~St~aarv~aS--t~~d~~savaagi~aL~ 219 (385)
T 2ifc_A 156 SYAESFLNAAFGRKATKEEIDAMNTALILYTDHEVPASTTAGLVAVS--TLSDMYSGITAALAALK 219 (385)
T ss_dssp CHHHHHHHHHHTSCCCHHHHHHHHHHHHHTSCCSSCHHHHHHHHHHT--TTCCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHhHhcCCCccHHHHHHHHHHh--cCCcHHHHHHHHHHHcc
Confidence 4779999999999999999999999886664 23333 3344444 44688899999999984
No 25
>3u5c_P 40S ribosomal protein S15; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_R 3o30_I 3o2z_I 3u5g_P 1s1h_S 3jyv_S*
Probab=32.91 E-value=17 Score=32.08 Aligned_cols=22 Identities=18% Similarity=0.406 Sum_probs=18.3
Q ss_pred eeecCCCHHHHhhhCCCCCCCCCCCHHHHHHH
Q 012206 95 IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWL 126 (468)
Q Consensus 95 i~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~L 126 (468)
..|||++++||.+. ..|+++=|
T Consensus 15 FtyrG~~ld~Ll~m----------s~e~l~~L 36 (142)
T 3u5c_P 15 HSYRGVDLEKLLEM----------STEDFVKL 36 (142)
T ss_dssp CBSSSCBHHHHHTT----------CHHHHHHH
T ss_pred EEEccccHHHHHcC----------CHHHHHHH
Confidence 48999999999987 37887766
No 26
>3j20_T 30S ribosomal protein S19P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=32.45 E-value=16 Score=31.80 Aligned_cols=22 Identities=27% Similarity=0.490 Sum_probs=18.1
Q ss_pred eeecCCCHHHHhhhCCCCCCCCCCCHHHHHHH
Q 012206 95 IRFRGLSIPECQKLLPAAKPDGEPLPEGLLWL 126 (468)
Q Consensus 95 i~yRGy~I~eL~~~~p~~~~~~~~~~Eev~~L 126 (468)
..|||++++||.+. ..||++=|
T Consensus 6 ftyrG~~ld~L~~m----------s~~~l~~L 27 (132)
T 3j20_T 6 FRYRGYTLEQLMNM----------SLEELARL 27 (132)
T ss_dssp CCSSSSCHHHHHHH----------HHHHHHHH
T ss_pred EEEcCCcHHHHHcC----------CHHHHHHH
Confidence 47999999999997 37786665
No 27
>1vgp_A 373AA long hypothetical citrate synthase; open form, transferase; 2.70A {Sulfolobus tokodaii}
Probab=31.26 E-value=1.3e+02 Score=30.31 Aligned_cols=60 Identities=12% Similarity=0.193 Sum_probs=46.0
Q ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHhhCC--CcH--HHHHHHHcCCCCCChHHHHHHHHHHhc
Q 012206 119 LPEGLLWLLLTGKVPSKEQVDGLSKELRDRAT--VPD--YVYKAIDALPVTAHPMTQFASGVMALQ 180 (468)
Q Consensus 119 ~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~~--lp~--~v~~~i~~lP~~~hPM~~l~~avsaL~ 180 (468)
++-+.++++++|+.|++.+.+.|..-|.-+.+ +.. +...++.+ ..++|-..+++|+++|.
T Consensus 148 s~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~ST~aaRv~aS--t~ad~~savaagi~aL~ 211 (373)
T 1vgp_A 148 SHSENFLYMLYGDRPNEIKSKAMDVTLILHIDHEMNASTFASLVVAS--TFSDLYSSIVAGISALK 211 (373)
T ss_dssp CHHHHHHHHHHSSCCCHHHHHHHHHHHHTTSCCSCCHHHHHHHHHHT--TTCCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHhcCCCCCHHHHHHHHHHHHHhccCCCchHHHHHHHHHh--cCccHHHHHHHHHHhcC
Confidence 47789999999999999999999998866642 333 34445544 34789999999999994
No 28
>2ibp_A Citrate synthase; disulfide bond, homodimer, thermophilic, C transferase; 1.60A {Pyrobaculum aerophilum}
Probab=31.22 E-value=1.3e+02 Score=30.71 Aligned_cols=60 Identities=17% Similarity=0.252 Sum_probs=45.8
Q ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHhhCC--CcH--HHHHHHHcCCCCCChHHHHHHHHHHhc
Q 012206 119 LPEGLLWLLLTGKVPSKEQVDGLSKELRDRAT--VPD--YVYKAIDALPVTAHPMTQFASGVMALQ 180 (468)
Q Consensus 119 ~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~~--lp~--~v~~~i~~lP~~~hPM~~l~~avsaL~ 180 (468)
++-+.++++++|+.|++.+.+.|..-|.-+.+ +.. ....++.+ ..++|-..+++|+.+|.
T Consensus 182 s~a~nfl~ml~g~~p~~~~~~~ld~~LvL~ADHg~naST~aaRv~aS--t~ad~~savaagi~aL~ 245 (409)
T 2ibp_A 182 GHAANFLYMMFGREPDPLASRGIDLYLILHADHEVPASTFAAHVVAS--TLSDLYSSVAAAIAALK 245 (409)
T ss_dssp CHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCSCCHHHHHHHHHHT--TTCCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHHhcCCCCChhHHHHHHHhh--cCCcHHHHHHHHHHHcc
Confidence 47789999999999999999999998866642 333 34444444 34788899999999984
No 29
>1vgm_A 378AA long hypothetical citrate synthase; open form, transferase; 2.00A {Sulfolobus tokodaii}
Probab=30.93 E-value=1.4e+02 Score=30.17 Aligned_cols=60 Identities=15% Similarity=0.161 Sum_probs=45.7
Q ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHhhC--CCcHH--HHHHHHcCCCCCChHHHHHHHHHHhc
Q 012206 119 LPEGLLWLLLTGKVPSKEQVDGLSKELRDRA--TVPDY--VYKAIDALPVTAHPMTQFASGVMALQ 180 (468)
Q Consensus 119 ~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~--~lp~~--v~~~i~~lP~~~hPM~~l~~avsaL~ 180 (468)
++-+.++++++|+.|++.+.+.|..-|.-+. .+... ...++.+ ..++|-..+++|+++|.
T Consensus 152 s~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~ADHg~n~St~aaRv~aS--t~~d~~savaagi~aL~ 215 (378)
T 1vgm_A 152 SYAESFLAATFGKKPTQEEIKAMDASLILYTDHEVPASTTAALVASS--TLSDMYSCIVAALAALK 215 (378)
T ss_dssp CHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCSCCHHHHHHHHHHT--TTCCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHHhccCCCchHHHHHHHHHh--cCCcHHHHHHHHHHhcc
Confidence 5779999999999999999999999886665 23333 3444444 34688899999999984
No 30
>3hwk_A Methylcitrate synthase; niaid, ssgcid, structural genomics, seattle structural genomics center for infectious disease, tubercluosis; 2.30A {Mycobacterium tuberculosis}
Probab=29.98 E-value=1.3e+02 Score=30.95 Aligned_cols=60 Identities=12% Similarity=0.151 Sum_probs=46.4
Q ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHhhC--CCcH--HHHHHHHcCCCCCChHHHHHHHHHHhc
Q 012206 119 LPEGLLWLLLTGKVPSKEQVDGLSKELRDRA--TVPD--YVYKAIDALPVTAHPMTQFASGVMALQ 180 (468)
Q Consensus 119 ~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~--~lp~--~v~~~i~~lP~~~hPM~~l~~avsaL~ 180 (468)
++-+.++.+|+|+.|++.+.+.|..-|.-+. .+.. +...++.+ ..++|-..+++++.+|.
T Consensus 196 s~a~nfl~ml~g~~p~~~~~~~ld~~LiLhADHe~NaST~taRvvaS--t~ad~ysavaagi~aL~ 259 (414)
T 3hwk_A 196 GYAQNFLHMCFGEVPETAVVSAFEQSMILYAEHGFNASTFAARVVTS--TQSDIYSAVTGAIGALK 259 (414)
T ss_dssp CHHHHHHHHHHSSCCCHHHHHHHHHHHHHTSCCSSCHHHHHHHHHHT--TTCCHHHHHHHHHHHHT
T ss_pred cHHHHHHHHhcCCCCCHHHHHHHHHHHhhccCCCCChHHHHHHHHHh--cCCCHHHHHHHHHHHhc
Confidence 5779999999999999999999999886654 2333 44455555 34679999999999984
No 31
>2xzm_S RPS15E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_S 3j0o_S 3j0l_S 3j0p_S 3j0q_S
Probab=27.37 E-value=21 Score=31.51 Aligned_cols=13 Identities=31% Similarity=0.549 Sum_probs=12.1
Q ss_pred eeecCCCHHHHhh
Q 012206 95 IRFRGLSIPECQK 107 (468)
Q Consensus 95 i~yRGy~I~eL~~ 107 (468)
..|||++++||.+
T Consensus 11 ftyrG~~l~~L~~ 23 (144)
T 2xzm_S 11 FTFRGKGLEELTA 23 (144)
T ss_dssp CCCCTTCHHHHHH
T ss_pred eeecCCcHHHHHh
Confidence 4899999999999
No 32
>2c6x_A Citrate synthase 1; tricarboxylic acid cycle, transferase, allosteric enzyme, enzyme thermostability; HET: COZ CIT; 3.4A {Bacillus subtilis}
Probab=23.57 E-value=1.7e+02 Score=29.35 Aligned_cols=60 Identities=10% Similarity=0.148 Sum_probs=44.6
Q ss_pred CHHHHHHHHHhCCCCCHHHHHHHHHHHHhhC--CCcH--HHHHHHHcCCCCCChHHHHHHHHHHhc
Q 012206 119 LPEGLLWLLLTGKVPSKEQVDGLSKELRDRA--TVPD--YVYKAIDALPVTAHPMTQFASGVMALQ 180 (468)
Q Consensus 119 ~~Eev~~LLl~G~lPt~~ql~~f~~~L~~~~--~lp~--~v~~~i~~lP~~~hPM~~l~~avsaL~ 180 (468)
++-+.++++++|+.|++.+.+.|..-|.-+. .+.. +...++.+ ..++|-..+++|+++|.
T Consensus 145 s~a~nfl~ml~g~~p~~~~~~~ld~~Lvl~aDHg~n~St~aarv~aS--t~~d~~savaagi~aL~ 208 (363)
T 2c6x_A 145 GHVENYYYMLTGEQPSEAKKKALETYMILATEHGMNASTFSARVTLS--TESDLVSAVTAALGTMK 208 (363)
T ss_dssp CSHHHHHHHHHSSCCCHHHHHHHHHHHHHHHCCSSCHHHHHHHHHHT--TTCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCHHHHHHHHHHHHHhccCCCcHHHHHHHHHHh--cCccHHHHHHHHHHHcc
Confidence 4668899999999999999999998875543 2333 34444444 44689999999999984
No 33
>2qsr_A Transcription-repair coupling factor; structural genomics, PSI-2, protein ST initiative; 3.10A {Streptococcus pneumoniae}
Probab=22.32 E-value=74 Score=28.56 Aligned_cols=51 Identities=22% Similarity=0.200 Sum_probs=35.8
Q ss_pred HHHHHHhCC---CCCHHHHHHHHHHHHhh-CCCcHHHHHHHHcCCCCCChHHHHHHHHHHhcc
Q 012206 123 LLWLLLTGK---VPSKEQVDGLSKELRDR-ATVPDYVYKAIDALPVTAHPMTQFASGVMALQV 181 (468)
Q Consensus 123 v~~LLl~G~---lPt~~ql~~f~~~L~~~-~~lp~~v~~~i~~lP~~~hPM~~l~~avsaL~~ 181 (468)
-.-|-+|-+ +-|.+|++++..||..| +.+|+.|.++++. ..|+.....++-
T Consensus 28 ~~RL~lYkria~~~~~eel~~l~~EL~DRFG~lP~~v~~Ll~v--------~~lK~~a~~lgI 82 (173)
T 2qsr_A 28 RHKIEIYKKIRQIDNRVNYEELQEELIDRFGEYPDVVAYLLEI--------GLVKSYLDKVFV 82 (173)
T ss_dssp HHHHHHHHHHHTCCSHHHHHHHHHHHHHHHCSCCHHHHHHHHH--------HHHHHHHHHTTE
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCCcHHHHHHHHH--------HHHHHHHHHCCC
Confidence 344555543 46899999999999877 6899999999863 345554444443
No 34
>3iz6_R 40S ribosomal protein S15 (S19P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 2zkq_s
Probab=21.34 E-value=20 Score=32.02 Aligned_cols=14 Identities=14% Similarity=0.479 Sum_probs=0.0
Q ss_pred eeecCCCHHHHhhh
Q 012206 95 IRFRGLSIPECQKL 108 (468)
Q Consensus 95 i~yRGy~I~eL~~~ 108 (468)
..|||++++||.+.
T Consensus 24 FtYrG~~ld~Ll~m 37 (154)
T 3iz6_R 24 YSYRGVDLDALLDM 37 (154)
T ss_dssp --------------
T ss_pred EEEecCcHHHHHhC
Confidence 48999999999987
No 35
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=20.83 E-value=94 Score=30.24 Aligned_cols=44 Identities=14% Similarity=0.234 Sum_probs=34.8
Q ss_pred ChhhHHHHHHHHHhC-C---CcccCcCCCCCCCCCc-cHHHHHHHHHhh
Q 012206 327 TTEQLKDYVWKTLNS-G---KVVPGFGHGVLRKTDP-RYTCQREFALKH 370 (468)
Q Consensus 327 s~~~~~~~v~~~l~~-g---~~IpGfGH~vyr~~DP-Ra~~L~~~a~~~ 370 (468)
+++++++.+.+.++. | .-|.+.||-+...++| ..+.+.+.++++
T Consensus 287 t~e~i~~~v~~~l~~~g~~~g~I~~~g~gi~~~~p~en~~a~v~~v~~~ 335 (338)
T 2eja_A 287 SEEVIEEKTLGLLRRIPVKTRYVFNLGHGLAPDMELEKVKYLVDLVKSF 335 (338)
T ss_dssp CHHHHHHHHHHHHTTCCCSSSEEBCBSSCCCTTSCHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHhCCCCCeEEeCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 678999999998875 3 4799999999887777 666777777664
Done!