BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 012208
(468 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O29470|Y788_ARCFU Uncharacterized transporter AF_0788 OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=AF_0788 PE=3 SV=1
Length = 308
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 82/165 (49%), Gaps = 9/165 (5%)
Query: 122 KKIRSIFLLNVITIVYASDIPILKAAEEIMHPASFCAVRFVMSAIPFLPFV-FWARDDVK 180
K++ + L ++ +++ S P++K A + M P +F VRF ++ + FLPF+ W D
Sbjct: 39 KRLYADLGLALVALIWGSTFPVVKIALDSMSPFAFNTVRFFIACLFFLPFLKGWDFKD-- 96
Query: 181 TRNAGIELGLWVSLGYFVEALGLLTSDAGRASFISLFTVIVVPLFDGML-GAIIPAHTWF 239
G ++G+ LGY + +GL + A A FI+ V++ P+ ++ +
Sbjct: 97 ----GFKIGIASFLGYTFQTVGLDYTTATNAGFITSTYVVLAPIISWLVYKDVFDKRDVS 152
Query: 240 GVLISALGVGMLECSGSPPSVGDFLNFLSAIFFGIHMLRTERISR 284
GVL++ +G L S ++GD L A+FFG + SR
Sbjct: 153 GVLLAFVGFYFLS-GYSGFNIGDILMLFCALFFGAEIAMISHYSR 196
>sp|O31493|YDZE_BACSU Putative permease-like protein YdzE OS=Bacillus subtilis (strain
168) GN=ydzE PE=5 SV=1
Length = 78
Score = 40.0 bits (92), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 345 LYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAAL 404
+Y GI ST + ++ ++A+ + + +PL G W LLGE+ WIG+ L
Sbjct: 1 MYLGIVSTACAFLLWNHGLQLLNASSGGLFFFFQPLVGTLLGWILLGEQIGGTFWIGSFL 60
Query: 405 VLGGSLLV 412
+L G LLV
Sbjct: 61 ILSGVLLV 68
>sp|P96661|YDED_BACSU Uncharacterized transporter YdeD OS=Bacillus subtilis (strain 168)
GN=ydeD PE=3 SV=1
Length = 319
Score = 36.6 bits (83), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Query: 309 WVLVGGWFDSSQDFDQSPWTWTMLWDWMVTFPWVPALYTGIFSTGICLWIEIAAMRDVSA 368
W ++ G F + F PW + + + + L+ +F T I W I ++ +S
Sbjct: 195 WAMIIGGF--ALGFIHPPWQ--LDFQRLTAEAYAYILFVILFGTMIAFWFFIKSLESLSP 250
Query: 369 TETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALVLGGSLLVQMYRSSSPD 421
ET+++ LEPL L + + WIGA ++G +L++ +++ S +
Sbjct: 251 KETSLLGSLEPLSAVVTTVVWLKAPFGSFQWIGAICIIGITLILALHKEPSME 303
>sp|F4J9A3|WTR26_ARATH WAT1-related protein At3g53210 OS=Arabidopsis thaliana GN=At3g53210
PE=2 SV=1
Length = 369
Score = 36.2 bits (82), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 14/118 (11%)
Query: 345 LYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAAL 404
LYTG+ + + I+I + + L+ L A A LGE + G IGA L
Sbjct: 254 LYTGLVGSAMVFAIQIYVVERGGPLFVSAYLPLQTLIAAVLATLALGEHFYLGGLIGAIL 313
Query: 405 VLGGSLLVQMYRS------SSPDKSLKAEECTKTGSLLLIPELDKEKLQNNLSTTPVA 456
++ G LV M +S + + + + G D+E NN +P++
Sbjct: 314 IMSGLYLVVMGKSWENQALCQQQQHMISSAASDFG--------DEEDYHNNKPRSPIS 363
>sp|Q68XV0|SAM_RICTY S-adenosylmethionine uptake transporter OS=Rickettsia typhi (strain
ATCC VR-144 / Wilmington) GN=sam PE=3 SV=1
Length = 294
Score = 36.2 bits (82), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 120/296 (40%), Gaps = 52/296 (17%)
Query: 151 MHPASFCAVRFVMSAIPFLPF-VFWARDDVKTRNAGIEL--GLWVSLGYFVEALGLLTSD 207
+H RF+ S+I LPF V++ + +KTR+ I + GL + G GL +
Sbjct: 36 LHSFEVAFFRFLFSSIVLLPFVVYYGKSTLKTRHPVIHVLRGLLLFFGMTSWTYGLTIAP 95
Query: 208 AGRASFISLFTVIVVPLFDGMLGAIIPAHT-----WFGVLISALG-VGMLECSGSPPSVG 261
A+ IS +PLF +L I W ++ +G V ML+ P
Sbjct: 96 VTTATVISF----SIPLFTLILAVFILNENIIWQRWVVTVVGFIGLVVMLK-----PHTK 146
Query: 262 DF-LNFLSAIFFGIHMLRTERISRS-TKKENFLPLLGYEICVVALLSTIWVLVGGWFDSS 319
DF L I I + I++ KE+ L +L Y V A++S S
Sbjct: 147 DFNPEILYLILAAISFAMLDIINKKFVVKESMLSMLFYSAIVTAIVS---------LPVS 197
Query: 320 QDFDQSPWTWTMLWDWMVTFPWVPALYTGIFSTG----ICLWIEIAAMRDVSATETAIIY 375
++ +P ++ + T +F G L+ + A V AT TA
Sbjct: 198 MEYWITPSSFEL---------------TLLFVLGSSGSFILFFLLKAFTMVDATATAPYR 242
Query: 376 GLEPLWGAGFAWFLLGERWSTAGWIGAALVLGGSLLVQMYRSSSPDKSLKAEECTK 431
LE + A A+F+ E + GA +++ +L + MY S KS+ ++ ++
Sbjct: 243 YLELVISAIAAYFIFNEFPDKSTAHGAVIIIPATLFI-MY---SEKKSMSSKHESQ 294
>sp|Q9UYC6|LONB_PYRAB Archaeal Lon protease OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=lon PE=3 SV=1
Length = 998
Score = 35.8 bits (81), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 28/145 (19%)
Query: 102 SESVQIITKRPFWKRVLFASKKIRSIFLLNVITI-------------VYASDIPILKAAE 148
+E+V+++TK F K +L+A+K+I L V+ + VY +D LK A
Sbjct: 270 NENVEVLTKDGFTK-LLYANKRIGKQKLRRVVNLEKDYWFALTPDHKVYTTDG--LKEAG 326
Query: 149 EIMHPASFCAVRFV--------MSAIPFLPFVFWARDDVKTRNAGIELGLWVSLGYFVEA 200
EI +V + I LP DD + R +G+ + G E
Sbjct: 327 EITEKDELISVPITVFDCEDEDLKKIGLLPL---TSDDERLRKIATLMGILFNGGSIDEG 383
Query: 201 LGLLTSDAGRASFISLFTVIVVPLF 225
LG+LT + R S I F + + LF
Sbjct: 384 LGVLTLKSER-SVIEKFVITLKELF 407
>sp|Q9LV20|WTR17_ARATH WAT1-related protein At3g18200 OS=Arabidopsis thaliana GN=At3g18200
PE=2 SV=1
Length = 383
Score = 35.8 bits (81), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Query: 345 LYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAAL 404
LY GI ++G+ ++++ + A+ L+ L A A+ +LG++ + G +GA
Sbjct: 276 LYAGIIASGLVVYLQTWCIYKSGPVFVAVFQPLQTLLVAAMAFLILGDQLYSGGIVGAVF 335
Query: 405 VLGGSLLVQMYRSSSPDKSLKAEECTKTGSLLLIPELDKEKLQNN 449
++ G LV + ++ L EE + L L+ + ++N
Sbjct: 336 IMLGLYLV--LWGKNEERKLALEESQQDPESLTKHLLEAQHKKSN 378
>sp|O31540|YETK_BACSU Uncharacterized transporter YetK OS=Bacillus subtilis (strain 168)
GN=yetK PE=3 SV=1
Length = 330
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 346 YTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAALV 405
+TG+F ICL + ++ + TE+ I+ P+ ++FLL E+ IG L
Sbjct: 98 FTGVFLFSICL---LYGVQYTTGTESGILTSTTPMLIGILSFFLLREKIEKKTLIGILLA 154
Query: 406 LGGSLLVQMYRSSSPDKSLKAEECTKTGSLLLIPELDKEKL 446
+ G + + ++ + S D + A G++L+I + E L
Sbjct: 155 VCGVMAINLFGAGSQDGTPHA----LFGNMLIIAAVIGEAL 191
Score = 33.5 bits (75), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 3/100 (3%)
Query: 333 WDWMV--TFPWVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLL 390
+D+ V W LY +F T + ++ + + V A + I + P+ + +L
Sbjct: 231 FDYSVPTVLDWSYVLYYALFVTVLAFYLWYSGVTKVPAGVSGIFTSVLPVSAVILSGVIL 290
Query: 391 GERWSTAGWIGAALVLGGSLLVQMYRSSSPDKSLKAEECT 430
E + +IG A V+GG + V + + PD AEE T
Sbjct: 291 KEPFEFVHFIGIACVIGG-IFVTVIKKKQPDAYPAAEEKT 329
>sp|Q94AP3|WAT1_ARATH Protein WALLS ARE THIN 1 OS=Arabidopsis thaliana GN=WAT1 PE=1 SV=1
Length = 389
Score = 33.9 bits (76), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 44/112 (39%), Gaps = 7/112 (6%)
Query: 323 DQSPWTWTMLWDWMVTFPWVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWG 382
D W + W+ LY GI ++GI ++I + A+ ++ L
Sbjct: 254 DSQAWVFHSGWELFTI------LYAGIVASGIAFAVQIWCIDRGGPVFVAVYQPVQTLVV 307
Query: 383 AGFAWFLLGERWSTAGWIGAALVLGGSLLVQMYRSSSPDKSLKAEECTKTGS 434
A A LGE + G IGA L++ G V +Y S K E+ S
Sbjct: 308 AIMASIALGEEFYLGGIIGAVLIIAGLYFV-LYGKSEERKFAALEKAAIQSS 358
>sp|P39649|YWFM_BACSU Uncharacterized transporter YwfM OS=Bacillus subtilis (strain 168)
GN=ywfM PE=3 SV=1
Length = 296
Score = 33.9 bits (76), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 344 ALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAA 403
+LY G+ +T ++ + V A+ + EPL + F +GE S + W+G A
Sbjct: 212 SLYIGLIATCAAYFLFAKGLTGVPASAAVTLSLAEPLTASLLGVFFIGEMLSPSSWLGIA 271
Query: 404 LVLGGSLLVQMYRSSSPDKSLKAEEC 429
L++ G L++ S++P K AE
Sbjct: 272 LMMLGLLVI----SAAPRKQKTAEAA 293
>sp|Q9SUF1|WTR31_ARATH WAT1-related protein At4g08290 OS=Arabidopsis thaliana GN=At4g08290
PE=2 SV=1
Length = 384
Score = 33.5 bits (75), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 54/131 (41%), Gaps = 6/131 (4%)
Query: 323 DQSPWTWTMLWDWMVTFPWVPALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWG 382
++ P W + WD + P LYTGI S+GI +++ M+ L +
Sbjct: 240 ERHPSGWAVGWDARLFAP----LYTGIVSSGITYYVQGMVMKTRGPVFVTAFNPLCMILV 295
Query: 383 AGFAWFLLGERWSTAGWIGAALVLGGSLLVQMYRSSSPDKSLKAEECTKTGSLLLIPELD 442
A A F+L E+ IG A++ G L + D + + + SL +P
Sbjct: 296 ALIASFILHEQIHFGCVIGGAVIAAG--LYMVVWGKGKDYEVSGLDILEKNSLQELPITT 353
Query: 443 KEKLQNNLSTT 453
K + N L ++
Sbjct: 354 KSEDDNKLVSS 364
>sp|O26929|Y841_METTH Uncharacterized transporter MTH_841 OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_841 PE=3 SV=1
Length = 343
Score = 33.1 bits (74), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%)
Query: 344 ALYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAA 403
AL +FS G + A+R++ A+ ++ L L+GA FA+ +L E +S I
Sbjct: 270 ALGVSVFSIGCSFILIYIAIREIGASMVGALFPLSSLFGAIFAFIILREPFSIMQGISGI 329
Query: 404 LVLGG 408
++L G
Sbjct: 330 VMLTG 334
>sp|O86230|Y976A_HAEIN Uncharacterized transporter HI_0976.1 OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_0976.1
PE=3 SV=1
Length = 170
Score = 32.7 bits (73), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 345 LYTGIFSTGICLWIEIAAMRDVSATETAIIYGLEPLWGAGFAWFLLGERWSTAGWIGAAL 404
LY I + + W+ + V A + ++ LEPL+G FA LLGE S + +G +
Sbjct: 92 LYLAIGCSWLAYWLWNKGLNSVDANISGVLVALEPLFGILFAVSLLGETLSFSAALGITI 151
Query: 405 V----LGGSLLVQMYRSS 418
+ LG +LL ++ + S
Sbjct: 152 IMLATLGSTLLPKLLKKS 169
>sp|Q83RD1|MDTI_SHIFL Spermidine export protein MdtI OS=Shigella flexneri GN=mdtI PE=3
SV=1
Length = 109
Score = 32.7 bits (73), Expect = 5.9, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 12/62 (19%)
Query: 361 AAMRDVSATETAIIYGLEPLWGAGFA--------WFLLGERWSTAGWIGAALVLGGSLLV 412
A + V + +++Y L WG GF W L G+R + GWIG L+L G ++V
Sbjct: 51 ALSQAVKGIDLSVVYAL---WG-GFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMIMV 106
Query: 413 QM 414
++
Sbjct: 107 KL 108
>sp|Q3Z1V2|MDTI_SHISS Spermidine export protein MdtI OS=Shigella sonnei (strain Ss046)
GN=mdtI PE=3 SV=1
Length = 109
Score = 32.7 bits (73), Expect = 6.7, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 375 YGLEPLWGAGFAWFLLGERWSTAGWIGAALVLGGSLLVQM 414
+G+ AG W L G+R + GWIG L+L G ++V++
Sbjct: 71 FGIAATLAAG--WILFGQRLNRKGWIGLVLLLAGMIMVKL 108
>sp|Q0T4H8|MDTI_SHIF8 Spermidine export protein MdtI OS=Shigella flexneri serotype 5b
(strain 8401) GN=mdtI PE=3 SV=1
Length = 109
Score = 32.7 bits (73), Expect = 6.7, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 375 YGLEPLWGAGFAWFLLGERWSTAGWIGAALVLGGSLLVQM 414
+G+ AG W L G+R + GWIG L+L G ++V++
Sbjct: 71 FGIAATLAAG--WILFGQRLNRKGWIGLVLLLAGMIMVKL 108
>sp|Q320V5|MDTI_SHIBS Spermidine export protein MdtI OS=Shigella boydii serotype 4
(strain Sb227) GN=mdtI PE=3 SV=1
Length = 109
Score = 32.7 bits (73), Expect = 6.7, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 375 YGLEPLWGAGFAWFLLGERWSTAGWIGAALVLGGSLLVQM 414
+G+ AG W L G+R + GWIG L+L G ++V++
Sbjct: 71 FGIAATLAAG--WILFGQRLNRKGWIGLVLLLAGMIMVKL 108
>sp|B2U1Q8|MDTI_SHIB3 Spermidine export protein MdtI OS=Shigella boydii serotype 18
(strain CDC 3083-94 / BS512) GN=mdtI PE=3 SV=1
Length = 109
Score = 32.7 bits (73), Expect = 6.7, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 375 YGLEPLWGAGFAWFLLGERWSTAGWIGAALVLGGSLLVQM 414
+G+ AG W L G+R + GWIG L+L G ++V++
Sbjct: 71 FGIAATLAAG--WILFGQRLNRKGWIGLVLLLAGMIMVKL 108
>sp|Q1RBJ9|MDTI_ECOUT Spermidine export protein MdtI OS=Escherichia coli (strain UTI89 /
UPEC) GN=mdtI PE=3 SV=1
Length = 109
Score = 32.7 bits (73), Expect = 6.7, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 375 YGLEPLWGAGFAWFLLGERWSTAGWIGAALVLGGSLLVQM 414
+G+ AG W L G+R + GWIG L+L G ++V++
Sbjct: 71 FGIAATLAAG--WILFGQRLNRKGWIGLVLLLAGMIMVKL 108
>sp|B1LET7|MDTI_ECOSM Spermidine export protein MdtI OS=Escherichia coli (strain SMS-3-5
/ SECEC) GN=mdtI PE=3 SV=1
Length = 109
Score = 32.7 bits (73), Expect = 6.7, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 375 YGLEPLWGAGFAWFLLGERWSTAGWIGAALVLGGSLLVQM 414
+G+ AG W L G+R + GWIG L+L G ++V++
Sbjct: 71 FGIAATLAAG--WILFGQRLNRKGWIGLVLLLAGMIMVKL 108
>sp|B6IB33|MDTI_ECOSE Spermidine export protein MdtI OS=Escherichia coli (strain SE11)
GN=mdtI PE=3 SV=1
Length = 109
Score = 32.7 bits (73), Expect = 6.7, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 375 YGLEPLWGAGFAWFLLGERWSTAGWIGAALVLGGSLLVQM 414
+G+ AG W L G+R + GWIG L+L G ++V++
Sbjct: 71 FGIAATLAAG--WILFGQRLNRKGWIGLVLLLAGMIMVKL 108
>sp|B7NB49|MDTI_ECOLU Spermidine export protein MdtI OS=Escherichia coli O17:K52:H18
(strain UMN026 / ExPEC) GN=mdtI PE=3 SV=1
Length = 109
Score = 32.7 bits (73), Expect = 6.7, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 375 YGLEPLWGAGFAWFLLGERWSTAGWIGAALVLGGSLLVQM 414
+G+ AG W L G+R + GWIG L+L G ++V++
Sbjct: 71 FGIAATLAAG--WILFGQRLNRKGWIGLVLLLAGMIMVKL 108
>sp|P69210|MDTI_ECOLI Spermidine export protein MdtI OS=Escherichia coli (strain K12)
GN=mdtI PE=1 SV=1
Length = 109
Score = 32.7 bits (73), Expect = 6.7, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 375 YGLEPLWGAGFAWFLLGERWSTAGWIGAALVLGGSLLVQM 414
+G+ AG W L G+R + GWIG L+L G ++V++
Sbjct: 71 FGIAATLAAG--WILFGQRLNRKGWIGLVLLLAGMIMVKL 108
>sp|B1IQZ1|MDTI_ECOLC Spermidine export protein MdtI OS=Escherichia coli (strain ATCC
8739 / DSM 1576 / Crooks) GN=mdtI PE=3 SV=1
Length = 109
Score = 32.7 bits (73), Expect = 6.7, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 375 YGLEPLWGAGFAWFLLGERWSTAGWIGAALVLGGSLLVQM 414
+G+ AG W L G+R + GWIG L+L G ++V++
Sbjct: 71 FGIAATLAAG--WILFGQRLNRKGWIGLVLLLAGMIMVKL 108
>sp|A1ABE4|MDTI_ECOK1 Spermidine export protein MdtI OS=Escherichia coli O1:K1 / APEC
GN=mdtI PE=3 SV=1
Length = 109
Score = 32.7 bits (73), Expect = 6.7, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 375 YGLEPLWGAGFAWFLLGERWSTAGWIGAALVLGGSLLVQM 414
+G+ AG W L G+R + GWIG L+L G ++V++
Sbjct: 71 FGIAATLAAG--WILFGQRLNRKGWIGLVLLLAGMIMVKL 108
>sp|A8A0E0|MDTI_ECOHS Spermidine export protein MdtI OS=Escherichia coli O9:H4 (strain
HS) GN=mdtI PE=3 SV=1
Length = 109
Score = 32.7 bits (73), Expect = 6.7, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 375 YGLEPLWGAGFAWFLLGERWSTAGWIGAALVLGGSLLVQM 414
+G+ AG W L G+R + GWIG L+L G ++V++
Sbjct: 71 FGIAATLAAG--WILFGQRLNRKGWIGLVLLLAGMIMVKL 108
>sp|B1XF64|MDTI_ECODH Spermidine export protein MdtI OS=Escherichia coli (strain K12 /
DH10B) GN=mdtI PE=3 SV=1
Length = 109
Score = 32.7 bits (73), Expect = 6.7, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 375 YGLEPLWGAGFAWFLLGERWSTAGWIGAALVLGGSLLVQM 414
+G+ AG W L G+R + GWIG L+L G ++V++
Sbjct: 71 FGIAATLAAG--WILFGQRLNRKGWIGLVLLLAGMIMVKL 108
>sp|C4ZY62|MDTI_ECOBW Spermidine export protein MdtI OS=Escherichia coli (strain K12 /
MC4100 / BW2952) GN=mdtI PE=3 SV=1
Length = 109
Score = 32.7 bits (73), Expect = 6.7, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 375 YGLEPLWGAGFAWFLLGERWSTAGWIGAALVLGGSLLVQM 414
+G+ AG W L G+R + GWIG L+L G ++V++
Sbjct: 71 FGIAATLAAG--WILFGQRLNRKGWIGLVLLLAGMIMVKL 108
>sp|B7LZZ1|MDTI_ECO8A Spermidine export protein MdtI OS=Escherichia coli O8 (strain IAI1)
GN=mdtI PE=3 SV=1
Length = 109
Score = 32.7 bits (73), Expect = 6.7, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 375 YGLEPLWGAGFAWFLLGERWSTAGWIGAALVLGGSLLVQM 414
+G+ AG W L G+R + GWIG L+L G ++V++
Sbjct: 71 FGIAATLAAG--WILFGQRLNRKGWIGLVLLLAGMIMVKL 108
>sp|B7NUP0|MDTI_ECO7I Spermidine export protein MdtI OS=Escherichia coli O7:K1 (strain
IAI39 / ExPEC) GN=mdtI PE=3 SV=1
Length = 109
Score = 32.7 bits (73), Expect = 6.7, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 375 YGLEPLWGAGFAWFLLGERWSTAGWIGAALVLGGSLLVQM 414
+G+ AG W L G+R + GWIG L+L G ++V++
Sbjct: 71 FGIAATLAAG--WILFGQRLNRKGWIGLVLLLAGMIMVKL 108
>sp|B5Z435|MDTI_ECO5E Spermidine export protein MdtI OS=Escherichia coli O157:H7 (strain
EC4115 / EHEC) GN=mdtI PE=3 SV=1
Length = 109
Score = 32.7 bits (73), Expect = 6.7, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 375 YGLEPLWGAGFAWFLLGERWSTAGWIGAALVLGGSLLVQM 414
+G+ AG W L G+R + GWIG L+L G ++V++
Sbjct: 71 FGIAATLAAG--WILFGQRLNRKGWIGLVLLLAGMIMVKL 108
>sp|P69211|MDTI_ECO57 Spermidine export protein MdtI OS=Escherichia coli O157:H7 GN=mdtI
PE=3 SV=1
Length = 109
Score = 32.7 bits (73), Expect = 6.7, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 375 YGLEPLWGAGFAWFLLGERWSTAGWIGAALVLGGSLLVQM 414
+G+ AG W L G+R + GWIG L+L G ++V++
Sbjct: 71 FGIAATLAAG--WILFGQRLNRKGWIGLVLLLAGMIMVKL 108
>sp|B7L5F1|MDTI_ECO55 Spermidine export protein MdtI OS=Escherichia coli (strain 55989 /
EAEC) GN=mdtI PE=3 SV=1
Length = 109
Score = 32.7 bits (73), Expect = 6.7, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 375 YGLEPLWGAGFAWFLLGERWSTAGWIGAALVLGGSLLVQM 414
+G+ AG W L G+R + GWIG L+L G ++V++
Sbjct: 71 FGIAATLAAG--WILFGQRLNRKGWIGLVLLLAGMIMVKL 108
>sp|B7M9V2|MDTI_ECO45 Spermidine export protein MdtI OS=Escherichia coli O45:K1 (strain
S88 / ExPEC) GN=mdtI PE=3 SV=1
Length = 109
Score = 32.7 bits (73), Expect = 6.7, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 375 YGLEPLWGAGFAWFLLGERWSTAGWIGAALVLGGSLLVQM 414
+G+ AG W L G+R + GWIG L+L G ++V++
Sbjct: 71 FGIAATLAAG--WILFGQRLNRKGWIGLVLLLAGMIMVKL 108
>sp|B7URT9|MDTI_ECO27 Spermidine export protein MdtI OS=Escherichia coli O127:H6 (strain
E2348/69 / EPEC) GN=mdtI PE=3 SV=1
Length = 109
Score = 32.7 bits (73), Expect = 6.7, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 375 YGLEPLWGAGFAWFLLGERWSTAGWIGAALVLGGSLLVQM 414
+G+ AG W L G+R + GWIG L+L G ++V++
Sbjct: 71 FGIAATLAAG--WILFGQRLNRKGWIGLVLLLAGMIMVKL 108
>sp|A7ZM58|MDTI_ECO24 Spermidine export protein MdtI OS=Escherichia coli O139:H28 (strain
E24377A / ETEC) GN=mdtI PE=3 SV=1
Length = 109
Score = 32.7 bits (73), Expect = 6.7, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 375 YGLEPLWGAGFAWFLLGERWSTAGWIGAALVLGGSLLVQM 414
+G+ AG W L G+R + GWIG L+L G ++V++
Sbjct: 71 FGIAATLAAG--WILFGQRLNRKGWIGLVLLLAGMIMVKL 108
>sp|Q8FHB5|MDTI_ECOL6 Spermidine export protein MdtI OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=mdtI PE=3 SV=1
Length = 109
Score = 32.7 bits (73), Expect = 6.8, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 375 YGLEPLWGAGFAWFLLGERWSTAGWIGAALVLGGSLLVQM 414
+G+ AG W L G+R + GWIG L+L G ++V++
Sbjct: 71 FGIAATLAAG--WILFGQRLNRKGWIGLVLLLAGMIMVKL 108
>sp|Q0THM9|MDTI_ECOL5 Spermidine export protein MdtI OS=Escherichia coli O6:K15:H31
(strain 536 / UPEC) GN=mdtI PE=3 SV=1
Length = 109
Score = 32.7 bits (73), Expect = 6.8, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 375 YGLEPLWGAGFAWFLLGERWSTAGWIGAALVLGGSLLVQM 414
+G+ AG W L G+R + GWIG L+L G ++V++
Sbjct: 71 FGIAATLAAG--WILFGQRLNRKGWIGLVLLLAGMIMVKL 108
>sp|B7MV45|MDTI_ECO81 Spermidine export protein MdtI OS=Escherichia coli O81 (strain
ED1a) GN=mdtI PE=3 SV=1
Length = 109
Score = 32.7 bits (73), Expect = 6.8, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 375 YGLEPLWGAGFAWFLLGERWSTAGWIGAALVLGGSLLVQM 414
+G+ AG W L G+R + GWIG L+L G ++V++
Sbjct: 71 FGIAATLAAG--WILFGQRLNRKGWIGLVLLLAGMIMVKL 108
>sp|Q32G65|MDTI_SHIDS Spermidine export protein MdtI OS=Shigella dysenteriae serotype 1
(strain Sd197) GN=mdtI PE=3 SV=1
Length = 109
Score = 32.7 bits (73), Expect = 6.9, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 375 YGLEPLWGAGFAWFLLGERWSTAGWIGAALVLGGSLLVQM 414
+G+ AG W L G+R + GWIG L+L G ++V++
Sbjct: 71 FGIAATLAAG--WILFGQRLNRKGWIGLVLLLAGMIMVKL 108
>sp|A8GFH6|MDTI_SERP5 Spermidine export protein MdtI OS=Serratia proteamaculans (strain
568) GN=mdtI PE=3 SV=1
Length = 109
Score = 32.3 bits (72), Expect = 8.6, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 375 YGLEPLWGAGFAWFLLGERWSTAGWIGAALVLGGSLLVQM 414
+G+ AG W L G+R + GWIG L+L G +++++
Sbjct: 71 FGIAATIAAG--WILFGQRLNAKGWIGLVLLLAGMVIIKL 108
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.135 0.431
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 165,018,777
Number of Sequences: 539616
Number of extensions: 6725483
Number of successful extensions: 20507
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 20456
Number of HSP's gapped (non-prelim): 94
length of query: 468
length of database: 191,569,459
effective HSP length: 121
effective length of query: 347
effective length of database: 126,275,923
effective search space: 43817745281
effective search space used: 43817745281
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)