BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>012210
MAGQGFDTWILEVRGAGLSVRGSNLKEAQQSAHGVSEQMEAVANSTTSEAFAKSATNGVY
SADPQLTDFPGALSDSKISPVKKEDDLTRLATVWDESKLVTKLTETFMSLSERLSGFLSE
NQSKIMSAKLFDQISKLLEDSQLSEGFNEIRGKLSSLLERRQSSAIAIQIRDLSQNLVNM
IEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSK
PKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTLASSLDYTSSKSTLKLLLPLA
DPAQALNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTI
PAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLL
PEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDSVS

High Scoring Gene Products

Symbol, full name Information P value
AT1G15060 protein from Arabidopsis thaliana 7.0e-157
AT1G73750 protein from Arabidopsis thaliana 1.7e-90
lip1
lipase family member 1
gene from Dictyostelium discoideum 2.0e-05

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  012210
        (468 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2196179 - symbol:AT1G15060 species:3702 "Arabi...  1529  7.0e-157  1
TAIR|locus:2027784 - symbol:AT1G73750 "AT1G73750" species...   830  1.7e-90   2
DICTYBASE|DDB_G0268966 - symbol:lip1 "lipase family membe...   110  2.0e-05   3


>TAIR|locus:2196179 [details] [associations]
            symbol:AT1G15060 species:3702 "Arabidopsis thaliana"
            [GO:0009507 "chloroplast" evidence=IDA] EMBL:CP002684 GO:GO:0009507
            GO:GO:0016787 EMBL:AY090351 EMBL:BT001059 EMBL:AK176025
            IPI:IPI00544913 RefSeq:NP_172960.2 UniGene:At.41944
            ProteinModelPortal:Q8RX69 SMR:Q8RX69 PRIDE:Q8RX69
            EnsemblPlants:AT1G15060.1 GeneID:838071 KEGG:ath:AT1G15060
            TAIR:At1g15060 HOGENOM:HOG000238187 InParanoid:Q8RX69 OMA:PCITEFL
            PhylomeDB:Q8RX69 ProtClustDB:CLSN2680703 Genevestigator:Q8RX69
            InterPro:IPR016969 PIRSF:PIRSF031088 Uniprot:Q8RX69
        Length = 578

 Score = 1529 (543.3 bits), Expect = 7.0e-157, P = 7.0e-157
 Identities = 300/467 (64%), Positives = 362/467 (77%)

Query:     1 MAGQGFDTWILEVRGAGLSVRGSNLKEAQQSAHGVSEQMEAVANSTTSEAFAKSATNGVY 60
             M+GQGF+TWILEVRGAGLS R S+LK+ ++SAH +S Q+E+     T+ A A   T    
Sbjct:   124 MSGQGFETWILEVRGAGLSTRVSDLKDVEESAHELSNQIES-----TARAAAGKET---C 175

Query:    61 SADPQLTDFPGALSDSKISPVKKED-DLTRLATVWDESKLVTKLTETFMSLSERLSGFLS 119
             S + Q TD    + DS  +P    D  +   A+ WDES+LV +LT TFMSLSERLSGFLS
Sbjct:   176 SDEKQTTD----IMDSS-APAPASDVSVVGEASAWDESQLVARLTSTFMSLSERLSGFLS 230

Query:   120 ENQSKIMSAKLFDQISKLLEDSQLSEGFNEIRGKLSSLLERRQSSAIAIQIRDLSQNLVN 179
             E QS  MSAKLFD+I+ L++D+QL E FN+IR KL SL+E +Q+S +  Q+RDL+Q LVN
Sbjct:   231 EGQSVFMSAKLFDKIAMLVDDTQLYERFNDIRSKLLSLIESKQNSGLVNQVRDLAQRLVN 290

Query:   180 MIEEGQLSVSPQLFDLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQS 239
             + ++GQ SVSP L DLQERL +TI+DFQKQLDLIV+YDWDFDHYLEEDVPAA+EY+RAQS
Sbjct:   291 LFDDGQRSVSPPLIDLQERLTATIEDFQKQLDLIVKYDWDFDHYLEEDVPAAIEYVRAQS 350

Query:   240 KPKDGKLLAIGHSMGGILLYAMLSRCGFEGRESRLAAIVTXXXXXXXXXXXXXXXXXXXX 299
             KPKDGKL AIGHSMGGILLYAMLSRC FEGRE  +AA+ T                    
Sbjct:   351 KPKDGKLFAIGHSMGGILLYAMLSRCAFEGREPSVAAVATLASSVDYTTSNSALKLLIPL 410

Query:   300 XXXXXXXNVPVVPLGALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCT 359
                    +VPVVPLGALL AA+PLS+ PPYV SWLN+LIS+ DMMHPE+L+KLVLNNFCT
Sbjct:   411 ANPAEALSVPVVPLGALLAAAFPLSTRPPYVLSWLNDLISSTDMMHPEMLEKLVLNNFCT 470

Query:   360 IPAKLILQLTTAFREGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKL 419
             IPAKL++QLTTAFREGGLRDR GKF+YKDH+ + ++P+LA+AGD+DLICPP AVE+TVKL
Sbjct:   471 IPAKLLIQLTTAFREGGLRDRSGKFYYKDHLPRTSVPVLALAGDRDLICPPAAVEDTVKL 530

Query:   420 LPEDLVTYKVFGEPSGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDS 466
              PE+LVTYK+ GEP GPHYAHYDLVGGR+AVEQVYPCI +FL  +DS
Sbjct:   531 FPENLVTYKLLGEPDGPHYAHYDLVGGRLAVEQVYPCITEFLSHHDS 577


>TAIR|locus:2027784 [details] [associations]
            symbol:AT1G73750 "AT1G73750" species:3702 "Arabidopsis
            thaliana" [GO:0015996 "chlorophyll catabolic process" evidence=RCA]
            EMBL:CP002684 InterPro:IPR016969 PIRSF:PIRSF031088 EMBL:AF419606
            EMBL:AY113044 IPI:IPI00529361 RefSeq:NP_565071.1 UniGene:At.27382
            ProteinModelPortal:Q8W568 PaxDb:Q8W568 PRIDE:Q8W568
            EnsemblPlants:AT1G73750.1 GeneID:843710 KEGG:ath:AT1G73750
            TAIR:At1g73750 eggNOG:NOG324581 OMA:PAETWIG PhylomeDB:Q8W568
            ProtClustDB:CLSN2917443 Genevestigator:Q8W568 Uniprot:Q8W568
        Length = 452

 Score = 830 (297.2 bits), Expect = 1.7e-90, Sum P(2) = 1.7e-90
 Identities = 165/332 (49%), Positives = 219/332 (65%)

Query:   134 ISKLLEDSQLSEGFNEIRGKLSSLLERRQSSAIAIQIRDLSQNLVNMIEEGQLSVSPQLF 193
             +S L  D+ L +G N+ R  +S+LLE    + I++     S+ L N+++ G      ++ 
Sbjct:   134 LSSLSVDTNLGKGNNQQR-IVSNLLE----NFISV-----SERLENVLDGGS-----KIL 178

Query:   194 DLQERLFSTIDDFQKQLDLIVQYDWDFDHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSM 253
              +Q+RL     DF+++ +LI  Y+WDFD+YLEEDVP+AM+Y+R Q+K KDGKLLA+GHSM
Sbjct:   179 GMQDRLSKRAGDFKQRFELIPHYNWDFDNYLEEDVPSAMDYVRTQTKSKDGKLLAVGHSM 238

Query:   254 GGILLYAMLSRCGFEGRESRLAAIVTXXXXXXXXXXXXXXXXXXXXXXXXXXXNVPVVPL 313
             GGILLYA+LSRCGF+G +S LA + T                           N+P++P+
Sbjct:   239 GGILLYALLSRCGFKGMDSGLAGVTTLASTFDYSSSGTLLKYLLPMKEPAQAINLPIMPI 298

Query:   314 GALLTAAYPLSSSPPYVFSWLNNLISAEDMMHPELLKKLVLNNFCTIPAKLILQLTTAFR 373
               +L  A+PL   PPY  SWL   ISA  MM PE+++KLVLN+ CT+P KL+LQLTTA  
Sbjct:   299 DTMLAMAHPLMCRPPYSLSWLTANISAPQMMDPEVIEKLVLNSLCTVPVKLLLQLTTAVD 358

Query:   374 EGGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEP 433
              GGLRDR G F YKDHI K N+PILA+AGD D+ICPP+AV +TVKL+PE L TYKV G P
Sbjct:   359 HGGLRDRTGTFCYKDHISKTNVPILALAGDWDIICPPDAVYDTVKLIPEHLATYKVVGSP 418

Query:   434 SGPHYAHYDLVGGRMAVEQVYPCIVQFLGRYD 465
              GPHY H DL+ GR A  +VYP I +FL + D
Sbjct:   419 GGPHYGHQDLISGRTARNEVYPLITRFLQQQD 450

 Score = 92 (37.4 bits), Expect = 1.7e-90, Sum P(2) = 1.7e-90
 Identities = 21/42 (50%), Positives = 26/42 (61%)

Query:     1 MAGQGFDTWILEVRGAGLSVRG--SNLKEAQQSAHGVSEQME 40
             M+G GFDTWILE+RGAGLS     +NL +       VS  +E
Sbjct:   117 MSGSGFDTWILELRGAGLSSLSVDTNLGKGNNQQRIVSNLLE 158


>DICTYBASE|DDB_G0268966 [details] [associations]
            symbol:lip1 "lipase family member 1" species:44689
            "Dictyostelium discoideum" [GO:0016788 "hydrolase activity, acting
            on ester bonds" evidence=IEA] [GO:0006629 "lipid metabolic process"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0044351
            "macropinocytosis" evidence=RCA] InterPro:IPR006693
            InterPro:IPR025483 Pfam:PF04083 PIRSF:PIRSF000862
            dictyBase:DDB_G0268966 InterPro:IPR000073 Pfam:PF00561
            GO:GO:0016042 EMBL:AAFI02000004 eggNOG:COG0596 GO:GO:0016788
            RefSeq:XP_646929.1 ProteinModelPortal:Q55EU1
            EnsemblProtists:DDB0202316 GeneID:8616617 KEGG:ddi:DDB_G0268966
            InParanoid:Q55EU1 OMA:IDILFEV ProtClustDB:CLSZ2431482
            Uniprot:Q55EU1
        Length = 414

 Score = 110 (43.8 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
 Identities = 31/94 (32%), Positives = 46/94 (48%)

Query:   375 GGLRDRGGKFFYKDHIHKCNIPILAIAGDQDLICPPEAVEETVKLLPEDLVTYKVFGEPS 434
             G L+  G     K  I + N P++A +G QD +  P+ V   +  L + LV YK      
Sbjct:   327 GNLQHYGQSTPPKYDITQFNTPVIAFSGGQDFLADPDDVAWLIPQL-KSLVYYKNL---- 381

Query:   435 GPHYAHYDLVGGRMAVEQVYPCIVQFLGRYDSVS 468
              P Y+H D V G  A   VY  +V +L +Y +V+
Sbjct:   382 -PTYSHLDFVWGETAYIDVYADVVTYLTKYSTVN 414

 Score = 51 (23.0 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
 Identities = 11/30 (36%), Positives = 16/30 (53%)

Query:     1 MAGQGFDTWILEVRGAGLSVRGSNLKEAQQ 30
             +A  GFD WI  VRG   S    +L  +++
Sbjct:   124 LADAGFDVWINNVRGTRYSNSSIDLDPSER 153

 Score = 50 (22.7 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query:   218 WDF--DHYLEEDVPAAMEYIRAQSKPKDGKLLAIGHSMG 254
             W F  D   E D+P  ++Y+   +   + K+  +GHS G
Sbjct:   156 WQFSYDQMAEFDLPCVIDYVLEVTG--NSKVGYVGHSQG 192


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.134   0.385    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      468       441   0.00089  118 3  11 22  0.41    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  616 (65 KB)
  Total size of DFA:  253 KB (2136 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  40.42u 0.14s 40.56t   Elapsed:  00:00:01
  Total cpu time:  40.42u 0.14s 40.56t   Elapsed:  00:00:01
  Start:  Thu May  9 21:02:49 2013   End:  Thu May  9 21:02:50 2013

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