Query 012213
Match_columns 468
No_of_seqs 424 out of 4138
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 04:59:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012213.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012213hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gt4_A Tyrosine-protein kinase 100.0 9.4E-59 3.2E-63 442.3 19.2 259 182-460 26-305 (308)
2 4asz_A BDNF/NT-3 growth factor 100.0 2.3E-59 7.7E-64 444.7 14.4 260 182-462 13-290 (299)
3 3omv_A RAF proto-oncogene seri 100.0 2.2E-58 7.4E-63 438.0 21.1 263 181-461 35-300 (307)
4 4aoj_A High affinity nerve gro 100.0 2.2E-58 7.5E-63 443.8 18.9 259 182-461 41-319 (329)
5 4b9d_A Serine/threonine-protei 100.0 8.8E-57 3E-61 432.9 15.5 253 181-454 23-276 (350)
6 3hmm_A TGF-beta receptor type- 100.0 4.8E-55 1.7E-59 417.5 20.4 272 182-467 3-303 (303)
7 4fih_A Serine/threonine-protei 100.0 8.4E-55 2.9E-59 418.5 19.9 256 181-460 73-331 (346)
8 4g3f_A NF-kappa-beta-inducing 100.0 1.1E-54 3.6E-59 416.6 19.7 253 181-459 57-314 (336)
9 4ase_A Vascular endothelial gr 100.0 2E-55 6.8E-60 426.6 14.3 263 181-462 63-348 (353)
10 4aw0_A HPDK1, 3-phosphoinositi 100.0 5.1E-55 1.7E-59 413.8 14.9 251 181-453 31-283 (311)
11 3fpq_A Serine/threonine-protei 100.0 3.4E-54 1.2E-58 406.2 18.1 249 184-454 28-282 (290)
12 4fie_A Serine/threonine-protei 100.0 1.6E-53 5.3E-58 419.6 20.7 258 180-461 149-409 (423)
13 3hyh_A Carbon catabolite-derep 100.0 2.8E-53 9.4E-58 396.6 19.4 248 181-454 12-262 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 4.5E-54 1.5E-58 407.4 12.5 249 182-454 24-281 (304)
15 4g31_A Eukaryotic translation 100.0 5.4E-52 1.8E-56 394.6 17.5 257 181-459 4-286 (299)
16 2qkw_B Protein kinase; three-h 100.0 6.3E-48 2.1E-52 372.8 25.7 275 181-462 38-316 (321)
17 4b99_A Mitogen-activated prote 100.0 1.6E-48 5.3E-53 384.7 21.6 272 181-459 53-351 (398)
18 3uim_A Brassinosteroid insensi 100.0 1.5E-47 5E-52 371.0 24.5 281 181-465 29-315 (326)
19 4f9c_A Cell division cycle 7-r 100.0 5E-48 1.7E-52 377.1 20.1 200 179-390 18-250 (361)
20 3uto_A Twitchin; kinase, muscl 100.0 2E-47 6.8E-52 394.7 17.1 254 178-454 153-410 (573)
21 3v5w_A G-protein coupled recep 100.0 3.4E-47 1.2E-51 390.9 18.2 251 181-454 188-449 (689)
22 2nru_A Interleukin-1 receptor- 100.0 2.6E-45 8.7E-50 352.1 27.3 268 187-461 36-306 (307)
23 2psq_A Fibroblast growth facto 100.0 2.5E-46 8.6E-51 368.4 20.4 260 181-460 80-363 (370)
24 3soc_A Activin receptor type-2 100.0 1.4E-46 4.9E-51 363.4 16.6 268 181-462 23-319 (322)
25 3p86_A Serine/threonine-protei 100.0 3E-46 1E-50 358.9 17.7 264 181-463 36-300 (309)
26 3s95_A LIMK-1, LIM domain kina 100.0 6.5E-46 2.2E-50 356.8 19.3 260 181-460 9-281 (310)
27 3zgw_A Maternal embryonic leuc 100.0 8.2E-46 2.8E-50 360.6 19.0 254 177-454 5-260 (347)
28 3sxs_A Cytoplasmic tyrosine-pr 100.0 5.9E-46 2E-50 349.5 17.3 259 181-463 7-266 (268)
29 4hcu_A Tyrosine-protein kinase 100.0 6.1E-46 2.1E-50 349.6 17.1 257 181-461 9-266 (269)
30 1qcf_A Haematopoetic cell kina 100.0 4.4E-46 1.5E-50 376.7 17.1 262 181-466 187-449 (454)
31 3fxz_A Serine/threonine-protei 100.0 2.2E-45 7.4E-50 351.0 20.8 251 180-454 18-269 (297)
32 3fe3_A MAP/microtubule affinit 100.0 9.6E-46 3.3E-50 358.0 18.3 249 181-454 14-264 (328)
33 3lb7_A RAF proto-oncogene seri 100.0 2.7E-45 9.3E-50 351.9 21.1 264 181-462 35-301 (307)
34 3cbl_A C-FES, proto-oncogene t 100.0 2.3E-46 7.9E-51 369.8 13.3 260 181-461 113-374 (377)
35 3kul_A Ephrin type-A receptor 100.0 1.2E-45 4.2E-50 357.3 17.9 260 181-461 48-313 (325)
36 2qol_A Ephrin receptor; recept 100.0 1.5E-45 5.2E-50 363.1 17.8 259 181-460 44-308 (373)
37 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 1.2E-45 4.3E-50 373.0 16.6 263 181-467 183-446 (452)
38 1luf_A Muscle-specific tyrosin 100.0 2.1E-45 7.1E-50 358.3 17.5 263 181-463 46-337 (343)
39 3tki_A Serine/threonine-protei 100.0 3.8E-45 1.3E-49 353.5 19.1 255 180-454 5-261 (323)
40 3qup_A Tyrosine-protein kinase 100.0 3.2E-45 1.1E-49 354.0 18.0 261 181-460 22-297 (323)
41 1opk_A P150, C-ABL, proto-onco 100.0 3.9E-45 1.3E-49 373.3 19.2 259 181-463 219-480 (495)
42 2ivs_A Proto-oncogene tyrosine 100.0 5.8E-45 2E-49 350.7 18.9 261 181-461 22-311 (314)
43 1k9a_A Carboxyl-terminal SRC k 100.0 1E-44 3.4E-49 366.2 21.5 253 181-462 192-446 (450)
44 3tt0_A Basic fibroblast growth 100.0 4.5E-45 1.6E-49 361.3 17.9 260 181-460 68-351 (382)
45 3poz_A Epidermal growth factor 100.0 4.6E-45 1.6E-49 353.6 17.6 258 181-461 14-278 (327)
46 3l9p_A Anaplastic lymphoma kin 100.0 1.9E-45 6.6E-50 361.8 15.1 260 181-460 70-344 (367)
47 3niz_A Rhodanese family protei 100.0 1.8E-44 6.2E-49 346.9 21.3 269 178-454 17-300 (311)
48 3vhe_A Vascular endothelial gr 100.0 2.3E-45 7.8E-50 360.4 15.3 262 181-461 21-355 (359)
49 3gen_A Tyrosine-protein kinase 100.0 4.9E-45 1.7E-49 346.0 16.9 257 181-461 23-280 (283)
50 3q4u_A Activin receptor type-1 100.0 2.1E-44 7.3E-49 344.6 21.3 261 180-459 6-300 (301)
51 2yab_A Death-associated protei 100.0 8.7E-44 3E-48 348.4 25.2 252 178-454 8-272 (361)
52 3og7_A AKAP9-BRAF fusion prote 100.0 1.3E-44 4.4E-49 344.3 18.3 263 181-461 23-288 (289)
53 4eqm_A Protein kinase; transfe 100.0 5.6E-44 1.9E-48 340.7 22.8 265 181-463 10-277 (294)
54 1rjb_A FL cytokine receptor; k 100.0 1.2E-44 4E-49 353.3 18.3 264 181-463 44-336 (344)
55 1o6l_A RAC-beta serine/threoni 100.0 2.9E-44 1E-48 348.6 20.4 250 181-454 4-260 (337)
56 2c30_A Serine/threonine-protei 100.0 4.7E-44 1.6E-48 345.6 21.7 248 183-454 46-294 (321)
57 3kex_A Receptor tyrosine-prote 100.0 1.3E-44 4.5E-49 350.1 17.9 259 181-461 12-276 (325)
58 3kmu_A ILK, integrin-linked ki 100.0 1.4E-44 4.7E-49 340.3 17.3 257 181-461 9-270 (271)
59 3ugc_A Tyrosine-protein kinase 100.0 1.3E-45 4.3E-50 352.3 9.5 268 181-460 9-290 (295)
60 3t9t_A Tyrosine-protein kinase 100.0 1.2E-44 3.9E-49 340.3 15.8 258 181-462 7-265 (267)
61 3dtc_A Mitogen-activated prote 100.0 2E-44 6.7E-49 339.6 17.3 256 181-459 6-271 (271)
62 3kfa_A Tyrosine-protein kinase 100.0 3E-44 1E-48 341.4 18.7 257 181-460 12-270 (288)
63 1tki_A Titin; serine kinase, m 100.0 4.1E-44 1.4E-48 345.8 19.8 249 179-454 2-257 (321)
64 1mp8_A Focal adhesion kinase 1 100.0 2.3E-44 7.8E-49 341.1 17.4 258 181-461 14-276 (281)
65 2h8h_A Proto-oncogene tyrosine 100.0 6.3E-45 2.2E-49 375.1 14.6 263 181-467 266-529 (535)
66 1t46_A HOMO sapiens V-KIT hard 100.0 1.9E-44 6.4E-49 346.9 16.8 262 181-461 22-307 (313)
67 1qpc_A LCK kinase; alpha beta 100.0 1.3E-44 4.6E-49 342.2 15.3 256 181-460 12-268 (279)
68 4euu_A Serine/threonine-protei 100.0 3.5E-43 1.2E-47 339.3 25.3 273 181-460 8-308 (319)
69 2y0a_A Death-associated protei 100.0 2E-43 6.9E-48 341.8 23.6 256 178-454 7-271 (326)
70 3h4j_B AMPK kdaid, SNF1-like p 100.0 3.5E-44 1.2E-48 347.8 18.2 248 181-454 8-258 (336)
71 3o0g_A Cell division protein k 100.0 1.3E-43 4.3E-48 337.9 21.7 266 182-454 2-282 (292)
72 3brb_A Proto-oncogene tyrosine 100.0 5.1E-44 1.8E-48 344.1 19.2 261 181-460 33-307 (313)
73 3soa_A Calcium/calmodulin-depe 100.0 7E-44 2.4E-48 358.1 20.8 256 179-454 8-267 (444)
74 2izr_A Casein kinase I isoform 100.0 2E-43 6.8E-48 342.6 23.3 260 181-460 8-280 (330)
75 3qd2_B Eukaryotic translation 100.0 8.6E-44 2.9E-48 345.0 20.5 253 180-454 4-325 (332)
76 2pvf_A Fibroblast growth facto 100.0 3E-44 1E-48 349.0 17.0 260 181-460 34-317 (334)
77 2bdw_A Hypothetical protein K1 100.0 6.3E-44 2.2E-48 350.1 19.4 255 179-454 26-284 (362)
78 1ob3_A PFPK5, cell division co 100.0 8.7E-44 3E-48 338.4 19.6 265 182-454 2-280 (288)
79 3gni_B Strad alpha; kinase fol 100.0 1.1E-43 3.6E-48 352.4 21.0 270 181-454 24-333 (389)
80 1csn_A Casein kinase-1; phosph 100.0 2.7E-43 9.2E-48 336.4 22.8 264 181-462 9-284 (298)
81 1p4o_A Insulin-like growth fac 100.0 2.8E-44 9.5E-49 347.3 16.1 262 181-462 24-300 (322)
82 4f0f_A Serine/threonine-protei 100.0 3.9E-43 1.3E-47 333.6 23.6 257 181-459 18-287 (287)
83 3dbq_A Dual specificity protei 100.0 3E-44 1E-48 350.2 16.1 252 181-454 8-273 (343)
84 2zv2_A Calcium/calmodulin-depe 100.0 1.6E-43 5.5E-48 338.2 20.7 251 181-454 12-292 (298)
85 3lzb_A Epidermal growth factor 100.0 8.6E-44 2.9E-48 344.6 19.0 259 181-461 14-278 (327)
86 4fr4_A YANK1, serine/threonine 100.0 1.5E-43 5E-48 348.9 20.8 252 181-454 14-271 (384)
87 3mdy_A Bone morphogenetic prot 100.0 3.8E-43 1.3E-47 341.4 23.5 272 179-466 34-336 (337)
88 4dc2_A Protein kinase C IOTA t 100.0 1.3E-43 4.4E-48 350.4 20.4 251 181-449 51-307 (396)
89 3gxj_A TGF-beta receptor type- 100.0 2.6E-45 8.7E-50 351.2 7.3 264 181-467 2-303 (303)
90 3c0i_A Peripheral plasma membr 100.0 1.4E-43 4.7E-48 346.5 19.6 252 181-454 23-286 (351)
91 3c1x_A Hepatocyte growth facto 100.0 8.3E-44 2.8E-48 350.4 18.1 256 184-460 91-354 (373)
92 2yex_A Serine/threonine-protei 100.0 4.4E-43 1.5E-47 331.2 21.9 255 180-454 5-261 (276)
93 1b6c_B TGF-B superfamily recep 100.0 2.7E-43 9.3E-48 343.2 20.9 269 180-467 40-342 (342)
94 2zmd_A Dual specificity protei 100.0 7.6E-44 2.6E-48 353.1 17.2 251 182-454 56-320 (390)
95 3p1a_A MYT1 kinase, membrane-a 100.0 5.6E-44 1.9E-48 343.5 15.7 247 181-454 56-304 (311)
96 1kob_A Twitchin; kinase, intra 100.0 1.9E-43 6.5E-48 349.1 19.6 255 178-454 47-304 (387)
97 3op5_A Serine/threonine-protei 100.0 1E-43 3.6E-48 349.3 17.4 269 181-460 34-328 (364)
98 1fot_A TPK1 delta, CAMP-depend 100.0 2.9E-43 1E-47 339.1 19.8 247 181-454 5-258 (318)
99 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.3E-44 1.1E-48 350.5 13.3 250 181-454 22-280 (353)
100 1xbb_A Tyrosine-protein kinase 100.0 1.3E-43 4.5E-48 337.6 17.1 258 181-460 15-278 (291)
101 2i1m_A Macrophage colony-stimu 100.0 5E-44 1.7E-48 347.2 14.3 261 181-460 45-325 (333)
102 1mqb_A Ephrin type-A receptor 100.0 2.2E-43 7.4E-48 342.7 18.7 259 181-460 43-308 (333)
103 3f66_A Hepatocyte growth facto 100.0 2.9E-43 9.8E-48 336.4 19.2 260 181-461 24-291 (298)
104 3dls_A PAS domain-containing s 100.0 2.8E-43 9.5E-48 342.1 19.1 248 177-455 19-275 (335)
105 3kk8_A Calcium/calmodulin depe 100.0 4.3E-43 1.5E-47 332.7 19.9 255 179-454 3-261 (284)
106 2a19_B Interferon-induced, dou 100.0 1.4E-43 4.9E-48 335.8 16.6 252 179-463 8-276 (284)
107 2ozo_A Tyrosine-protein kinase 100.0 2.8E-43 9.5E-48 368.0 20.3 249 189-459 343-596 (613)
108 4e5w_A Tyrosine-protein kinase 100.0 3.2E-43 1.1E-47 336.6 19.0 269 181-460 20-301 (302)
109 2w4o_A Calcium/calmodulin-depe 100.0 2.3E-43 7.9E-48 344.6 18.4 251 180-454 51-305 (349)
110 2eva_A TAK1 kinase - TAB1 chim 100.0 2.5E-43 8.6E-48 338.4 18.2 254 181-460 7-262 (307)
111 1u59_A Tyrosine-protein kinase 100.0 2.3E-43 7.7E-48 335.3 17.7 257 182-460 9-271 (287)
112 3a8x_A Protein kinase C IOTA t 100.0 5.6E-43 1.9E-47 341.0 20.7 251 181-449 8-264 (345)
113 2xir_A Vascular endothelial gr 100.0 9.5E-44 3.3E-48 342.5 15.1 263 181-462 26-311 (316)
114 1rdq_E PKA C-alpha, CAMP-depen 100.0 3.4E-43 1.2E-47 343.1 18.9 247 181-454 40-293 (350)
115 3lxp_A Non-receptor tyrosine-p 100.0 6E-44 2.1E-48 344.4 13.2 268 184-460 33-309 (318)
116 3pls_A Macrophage-stimulating 100.0 5.7E-43 1.9E-47 334.2 19.8 257 183-460 22-286 (298)
117 2v62_A Serine/threonine-protei 100.0 3.1E-43 1.1E-47 343.3 18.3 270 181-462 36-329 (345)
118 1xjd_A Protein kinase C, theta 100.0 8.2E-44 2.8E-48 346.4 14.2 249 181-453 16-268 (345)
119 1byg_A CSK, protein (C-termina 100.0 1.7E-43 5.8E-48 334.6 15.8 252 181-461 20-273 (278)
120 2y94_A 5'-AMP-activated protei 100.0 7.3E-43 2.5E-47 353.0 21.2 249 181-454 15-266 (476)
121 3cc6_A Protein tyrosine kinase 100.0 2.5E-43 8.5E-48 334.0 16.7 257 181-460 11-272 (281)
122 3e7e_A HBUB1, BUB1A, mitotic c 100.0 6.4E-43 2.2E-47 343.8 20.2 251 181-460 64-338 (365)
123 3a62_A Ribosomal protein S6 ki 100.0 4.1E-43 1.4E-47 339.9 18.4 250 181-454 16-276 (327)
124 2wqm_A Serine/threonine-protei 100.0 8.3E-43 2.9E-47 335.1 20.5 266 181-465 31-301 (310)
125 1x8b_A WEE1HU, WEE1-like prote 100.0 3.1E-43 1.1E-47 334.0 17.2 248 179-454 8-279 (289)
126 3cok_A Serine/threonine-protei 100.0 6.4E-43 2.2E-47 330.5 19.0 251 181-454 10-262 (278)
127 4eut_A Serine/threonine-protei 100.0 1.1E-42 3.7E-47 345.8 21.5 274 181-461 8-309 (396)
128 3uc3_A Serine/threonine-protei 100.0 7.9E-43 2.7E-47 342.3 20.2 251 181-454 19-274 (361)
129 3lm5_A Serine/threonine-protei 100.0 5.6E-43 1.9E-47 338.9 19.0 258 178-454 24-287 (327)
130 2eue_A Carbon catabolite derep 100.0 4.6E-43 1.6E-47 331.0 17.8 248 181-454 12-262 (275)
131 3hko_A Calcium/calmodulin-depe 100.0 4.4E-43 1.5E-47 342.2 18.2 262 179-459 23-337 (345)
132 4fvq_A Tyrosine-protein kinase 100.0 8.3E-44 2.8E-48 338.5 12.6 255 181-465 7-279 (289)
133 4fl3_A Tyrosine-protein kinase 100.0 2.3E-43 7.8E-48 369.6 17.1 250 188-459 375-629 (635)
134 1nxk_A MAP kinase-activated pr 100.0 1.4E-42 4.6E-47 345.1 21.8 251 180-454 59-321 (400)
135 2yfx_A Tyrosine-protein kinase 100.0 2.3E-43 7.8E-48 341.7 15.9 260 181-460 29-303 (327)
136 3kn6_A Ribosomal protein S6 ki 100.0 3.8E-43 1.3E-47 339.7 17.2 245 187-454 16-270 (325)
137 2i0e_A Protein kinase C-beta I 100.0 4.5E-43 1.5E-47 342.3 17.7 250 181-454 19-276 (353)
138 3f3z_A Calcium/calmodulin-depe 100.0 1.5E-42 5.1E-47 327.9 20.7 248 179-454 6-261 (277)
139 2x4f_A Myosin light chain kina 100.0 2.6E-43 8.7E-48 347.1 16.1 248 185-454 92-342 (373)
140 3v8s_A RHO-associated protein 100.0 1.7E-43 5.9E-48 351.4 14.9 251 181-454 68-329 (410)
141 2pmi_A Negative RE, cyclin-dep 100.0 1.4E-42 5E-47 334.6 20.9 266 181-454 4-293 (317)
142 2a2a_A Death-associated protei 100.0 2.9E-42 9.9E-47 333.1 23.0 256 178-454 8-272 (321)
143 1fvr_A Tyrosine-protein kinase 100.0 6E-43 2E-47 338.8 18.2 259 181-462 24-301 (327)
144 4agu_A Cyclin-dependent kinase 100.0 9.7E-43 3.3E-47 334.8 19.5 265 181-454 2-284 (311)
145 2w5a_A Serine/threonine-protei 100.0 7.7E-44 2.6E-48 337.0 11.6 262 181-460 5-273 (279)
146 4aw2_A Serine/threonine-protei 100.0 1.9E-43 6.4E-48 353.8 15.0 257 181-454 73-338 (437)
147 3fdn_A Serine/threonine-protei 100.0 4.9E-43 1.7E-47 331.6 17.1 248 181-454 8-257 (279)
148 4ejn_A RAC-alpha serine/threon 100.0 2.6E-43 8.8E-48 355.8 16.1 250 181-454 147-404 (446)
149 3g33_A Cell division protein k 100.0 9.7E-43 3.3E-47 334.4 19.2 266 181-454 8-296 (308)
150 3is5_A Calcium-dependent prote 100.0 8.8E-43 3E-47 330.9 18.6 254 179-454 19-278 (285)
151 2jii_A Serine/threonine-protei 100.0 5.3E-43 1.8E-47 342.7 17.6 264 181-461 41-336 (352)
152 3lxl_A Tyrosine-protein kinase 100.0 5.2E-44 1.8E-48 346.2 10.3 273 181-461 22-303 (327)
153 2acx_A G protein-coupled recep 100.0 5.5E-43 1.9E-47 358.8 18.0 255 181-454 183-444 (576)
154 4hgt_A Casein kinase I isoform 100.0 5.3E-42 1.8E-46 327.0 23.6 262 181-461 8-280 (296)
155 2r5t_A Serine/threonine-protei 100.0 5.7E-43 1.9E-47 344.0 16.8 252 181-456 37-291 (373)
156 1u5q_A Serine/threonine protei 100.0 5.3E-43 1.8E-47 341.7 16.4 250 180-455 52-306 (348)
157 3ork_A Serine/threonine protei 100.0 5.6E-43 1.9E-47 336.6 16.3 264 178-459 8-279 (311)
158 3oz6_A Mitogen-activated prote 100.0 6.1E-43 2.1E-47 346.8 16.9 205 179-390 6-234 (388)
159 3uzp_A CKI-delta, CKID, casein 100.0 4.9E-42 1.7E-46 327.4 22.2 264 181-463 8-282 (296)
160 3llt_A Serine/threonine kinase 100.0 2.2E-42 7.4E-47 339.4 20.2 198 181-390 34-262 (360)
161 2buj_A Serine/threonine-protei 100.0 6.8E-43 2.3E-47 336.8 16.3 266 181-465 28-310 (317)
162 2h34_A Serine/threonine-protei 100.0 9.6E-43 3.3E-47 334.6 17.2 263 181-463 33-298 (309)
163 3i6u_A CDS1, serine/threonine- 100.0 5.7E-42 1.9E-46 342.9 23.4 252 178-454 131-399 (419)
164 2pml_X PFPK7, Ser/Thr protein 100.0 3.5E-42 1.2E-46 336.2 20.9 262 181-454 30-322 (348)
165 3g2f_A Bone morphogenetic prot 100.0 9.7E-43 3.3E-47 338.5 16.7 271 181-460 12-317 (336)
166 2wtk_C Serine/threonine-protei 100.0 4.1E-42 1.4E-46 329.4 20.9 261 180-461 3-272 (305)
167 3a7i_A MST3 kinase, serine/thr 100.0 3.1E-42 1.1E-46 330.0 20.0 250 181-455 21-271 (303)
168 2vd5_A DMPK protein; serine/th 100.0 4.6E-43 1.6E-47 348.6 14.6 256 181-454 60-327 (412)
169 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.6E-42 9E-47 352.9 19.9 256 181-454 184-448 (543)
170 3ttj_A Mitogen-activated prote 100.0 3.5E-42 1.2E-46 348.3 20.6 260 180-454 60-355 (464)
171 2w1i_A JAK2; chromosomal rearr 100.0 1.6E-42 5.6E-47 335.6 17.4 268 181-460 40-321 (326)
172 2ac3_A MAP kinase-interacting 100.0 2.3E-42 7.9E-47 332.9 18.0 263 181-454 11-295 (316)
173 2r3i_A Cell division protein k 100.0 2.8E-42 9.5E-47 329.6 18.2 273 181-460 2-291 (299)
174 1vzo_A Ribosomal protein S6 ki 100.0 7.8E-43 2.7E-47 341.7 14.5 256 181-455 53-322 (355)
175 3bhy_A Death-associated protei 100.0 1.1E-41 3.8E-46 322.8 22.1 259 181-460 4-273 (283)
176 3rp9_A Mitogen-activated prote 100.0 1E-42 3.4E-47 352.8 15.6 198 180-383 51-280 (458)
177 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.9E-42 6.7E-47 335.5 17.0 265 181-454 33-318 (329)
178 2qr7_A Ribosomal protein S6 ki 100.0 1.1E-42 3.9E-47 338.4 15.4 255 177-454 17-277 (342)
179 2jam_A Calcium/calmodulin-depe 100.0 5E-42 1.7E-46 328.8 19.2 252 179-454 6-261 (304)
180 2rku_A Serine/threonine-protei 100.0 3.8E-42 1.3E-46 328.0 18.2 255 181-459 14-272 (294)
181 3lij_A Calcium/calmodulin depe 100.0 6.2E-42 2.1E-46 350.1 21.0 254 179-454 34-291 (494)
182 2vgo_A Serine/threonine-protei 100.0 4.1E-42 1.4E-46 326.1 18.1 253 181-459 13-269 (284)
183 4aaa_A Cyclin-dependent kinase 100.0 2.1E-42 7.3E-47 335.5 16.5 266 181-454 24-306 (331)
184 2clq_A Mitogen-activated prote 100.0 6.9E-42 2.4E-46 326.1 19.6 252 182-454 22-278 (295)
185 3mwu_A Calmodulin-domain prote 100.0 3.6E-42 1.2E-46 351.2 18.8 259 179-459 19-283 (486)
186 2owb_A Serine/threonine-protei 100.0 5.6E-42 1.9E-46 333.1 19.1 259 181-463 40-302 (335)
187 3fme_A Dual specificity mitoge 100.0 1.7E-42 5.9E-47 329.5 15.2 252 181-454 6-266 (290)
188 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.3E-42 4.3E-47 335.2 14.3 261 181-463 32-304 (319)
189 3mi9_A Cell division protein k 100.0 7.2E-42 2.5E-46 334.5 19.9 268 181-454 16-311 (351)
190 1t4h_A Serine/threonine-protei 100.0 6.2E-42 2.1E-46 325.8 18.7 252 181-454 25-282 (290)
191 2h6d_A 5'-AMP-activated protei 100.0 4.7E-42 1.6E-46 324.2 17.5 249 181-454 10-261 (276)
192 1u46_A ACK-1, activated CDC42 100.0 1.4E-42 4.7E-47 330.4 13.7 263 181-463 17-286 (291)
193 2y7j_A Phosphorylase B kinase 100.0 2.5E-41 8.5E-46 332.2 22.8 251 179-454 91-359 (365)
194 3sv0_A Casein kinase I-like; t 100.0 2E-41 7E-46 343.0 22.7 263 180-460 5-277 (483)
195 1cm8_A Phosphorylated MAP kina 100.0 5.5E-42 1.9E-46 337.0 17.8 268 180-460 23-315 (367)
196 3mtl_A Cell division protein k 100.0 1.6E-42 5.6E-47 335.2 13.8 264 182-454 2-281 (324)
197 3byv_A Rhoptry kinase; malaria 100.0 6E-43 2E-47 345.5 10.8 243 181-454 72-359 (377)
198 3q5i_A Protein kinase; CDPK, m 100.0 3.4E-41 1.1E-45 345.5 23.9 250 179-454 33-301 (504)
199 3eqc_A Dual specificity mitoge 100.0 3.8E-42 1.3E-46 337.7 16.2 264 181-454 32-324 (360)
200 3n9x_A Phosphotransferase; mal 100.0 8.3E-42 2.8E-46 343.1 18.7 203 180-388 24-253 (432)
201 3nsz_A CK II alpha, casein kin 100.0 3.1E-41 1.1E-45 327.0 21.5 258 181-454 35-319 (330)
202 3nyv_A Calmodulin-domain prote 100.0 5.8E-42 2E-46 349.7 17.2 254 179-454 23-281 (484)
203 3an0_A Dual specificity mitoge 100.0 5.2E-42 1.8E-46 334.0 16.0 251 181-454 50-310 (340)
204 3cek_A Dual specificity protei 100.0 6E-42 2.1E-46 329.6 16.2 252 181-454 27-292 (313)
205 2xrw_A Mitogen-activated prote 100.0 1.4E-41 4.7E-46 334.9 18.9 260 180-454 23-318 (371)
206 3com_A Serine/threonine-protei 100.0 2.6E-41 8.9E-46 325.3 19.7 250 181-454 28-278 (314)
207 2ycf_A Serine/threonine-protei 100.0 4.5E-41 1.5E-45 324.9 21.5 255 179-454 7-274 (322)
208 2j7t_A Serine/threonine-protei 100.0 5.6E-42 1.9E-46 328.0 14.8 253 180-454 17-275 (302)
209 3pfq_A PKC-B, PKC-beta, protei 100.0 1.3E-41 4.5E-46 358.6 18.9 250 181-454 340-597 (674)
210 1ua2_A CAK, cell division prot 100.0 3.5E-41 1.2E-45 329.0 20.5 267 181-455 9-292 (346)
211 2j0j_A Focal adhesion kinase 1 100.0 3.5E-42 1.2E-46 361.9 14.4 258 181-461 389-651 (656)
212 1blx_A Cyclin-dependent kinase 100.0 2.7E-41 9.1E-46 326.9 19.3 266 181-454 10-296 (326)
213 2x7f_A TRAF2 and NCK-interacti 100.0 1.3E-41 4.5E-46 329.1 17.0 251 181-454 23-286 (326)
214 3kvw_A DYRK2, dual specificity 100.0 2.6E-41 8.8E-46 339.0 18.8 201 178-390 93-302 (429)
215 2fst_X Mitogen-activated prote 100.0 5.3E-42 1.8E-46 336.9 13.5 263 179-454 26-311 (367)
216 2wei_A Calmodulin-domain prote 100.0 4.4E-41 1.5E-45 319.6 19.2 260 178-459 18-283 (287)
217 2vwi_A Serine/threonine-protei 100.0 1.3E-41 4.5E-46 325.4 15.6 269 181-461 14-296 (303)
218 1wak_A Serine/threonine-protei 100.0 4.3E-41 1.5E-45 334.3 19.6 262 181-454 36-391 (397)
219 3eb0_A Putative uncharacterize 100.0 5.1E-41 1.7E-45 332.4 19.8 260 181-454 6-321 (383)
220 3pg1_A Mitogen-activated prote 100.0 4.8E-41 1.6E-45 330.1 19.4 266 180-454 20-316 (362)
221 3ll6_A Cyclin G-associated kin 100.0 1E-41 3.4E-46 331.1 13.9 258 181-461 27-308 (337)
222 3q60_A ROP5B; pseudokinase, tr 100.0 1.3E-41 4.6E-46 335.1 14.2 254 181-454 61-352 (371)
223 4e7w_A Glycogen synthase kinas 100.0 4.4E-41 1.5E-45 333.8 17.7 261 181-454 39-321 (394)
224 4exu_A Mitogen-activated prote 100.0 9.1E-41 3.1E-45 329.1 19.6 262 179-454 39-323 (371)
225 1phk_A Phosphorylase kinase; g 100.0 9.3E-41 3.2E-45 318.9 18.6 255 179-454 14-283 (298)
226 1z57_A Dual specificity protei 100.0 7.1E-41 2.4E-45 325.3 18.1 261 180-454 12-328 (339)
227 3coi_A Mitogen-activated prote 100.0 8.2E-41 2.8E-45 327.3 18.5 261 180-454 22-305 (353)
228 3rgf_A Cyclin-dependent kinase 100.0 4.9E-41 1.7E-45 335.0 17.2 202 181-390 19-239 (405)
229 1j1b_A Glycogen synthase kinas 100.0 9.7E-41 3.3E-45 334.0 19.4 266 181-460 53-344 (420)
230 3qyz_A Mitogen-activated prote 100.0 1.5E-40 5.3E-45 326.7 20.3 265 181-454 26-313 (364)
231 3fhr_A MAP kinase-activated pr 100.0 5.6E-41 1.9E-45 326.1 16.7 251 180-454 26-287 (336)
232 3aln_A Dual specificity mitoge 100.0 6.4E-41 2.2E-45 324.5 16.9 251 181-454 21-285 (327)
233 3e3p_A Protein kinase, putativ 100.0 1.2E-40 4.1E-45 326.9 18.2 269 181-460 22-322 (360)
234 2i6l_A Mitogen-activated prote 100.0 1.4E-40 4.9E-45 320.6 17.7 278 179-466 8-319 (320)
235 1zy4_A Serine/threonine-protei 100.0 1.4E-40 4.9E-45 318.0 16.8 252 180-454 4-283 (303)
236 2vx3_A Dual specificity tyrosi 100.0 7.5E-40 2.6E-44 323.9 21.6 203 178-390 50-261 (382)
237 2b9h_A MAP kinase FUS3, mitoge 100.0 2.6E-40 8.9E-45 323.6 17.8 272 180-460 9-313 (353)
238 3a99_A Proto-oncogene serine/t 100.0 6.3E-41 2.2E-45 323.5 13.3 243 180-454 41-293 (320)
239 2dyl_A Dual specificity mitoge 100.0 1.7E-40 5.9E-45 320.0 15.5 253 181-454 24-283 (318)
240 2rio_A Serine/threonine-protei 100.0 2.3E-40 7.7E-45 332.8 17.0 250 182-454 15-295 (434)
241 2iwi_A Serine/threonine-protei 100.0 1.4E-40 4.7E-45 319.9 14.7 244 179-454 28-283 (312)
242 1q8y_A SR protein kinase; tran 100.0 2.7E-40 9.4E-45 325.9 16.3 266 181-459 18-340 (373)
243 2eu9_A Dual specificity protei 100.0 4.9E-40 1.7E-44 321.6 17.9 261 180-454 17-333 (355)
244 3p23_A Serine/threonine-protei 100.0 4.8E-40 1.6E-44 329.6 17.0 249 182-454 24-283 (432)
245 3qa8_A MGC80376 protein; kinas 100.0 2.8E-39 9.7E-44 334.6 14.2 270 181-461 13-309 (676)
246 3m2w_A MAP kinase-activated pr 100.0 3.3E-38 1.1E-42 301.5 20.2 235 178-459 13-263 (299)
247 3uqc_A Probable conserved tran 100.0 1.8E-38 6E-43 301.2 17.4 233 181-463 30-267 (286)
248 2pzi_A Probable serine/threoni 100.0 8.8E-39 3E-43 338.9 16.5 239 181-458 79-325 (681)
249 3dzo_A Rhoptry kinase domain; 100.0 5.1E-39 1.7E-43 320.9 13.4 243 181-454 77-363 (413)
250 2vuw_A Serine/threonine-protei 100.0 3.3E-37 1.1E-41 299.6 9.8 241 181-453 19-329 (336)
251 4azs_A Methyltransferase WBDD; 100.0 3.3E-31 1.1E-35 273.5 5.1 186 190-386 242-437 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 9.6E-29 3.3E-33 253.8 6.5 187 186-388 340-539 (540)
253 1zar_A RIO2 kinase; serine kin 99.9 1.2E-24 4.1E-29 205.1 8.2 145 184-360 92-252 (282)
254 1zth_A RIO1 serine protein kin 99.8 3.6E-20 1.2E-24 172.3 9.4 138 184-335 49-219 (258)
255 3rgz_A Protein brassinosteroid 99.8 2.1E-19 7.2E-24 193.0 9.4 113 1-113 639-751 (768)
256 4gyi_A RIO2 kinase; protein ki 99.7 2.5E-17 8.6E-22 159.3 10.1 139 184-335 97-265 (397)
257 1ogq_A PGIP-2, polygalacturona 99.6 1.7E-16 5.9E-21 151.8 7.5 109 1-110 204-312 (313)
258 2wfh_A SLIT homolog 2 protein 99.6 8.6E-16 2.9E-20 136.1 8.7 105 1-106 38-143 (193)
259 1w8a_A SLIT protein; signaling 99.6 8.3E-16 2.9E-20 136.1 8.4 105 1-105 36-142 (192)
260 2v70_A SLIT-2, SLIT homolog 2 99.6 1.6E-15 5.3E-20 137.4 8.5 99 1-99 39-139 (220)
261 3g39_A Variable lymphocyte rec 99.6 3.2E-15 1.1E-19 129.5 9.2 102 1-105 16-118 (170)
262 2r9u_A Variable lymphocyte rec 99.6 3.5E-15 1.2E-19 129.8 9.2 101 1-105 19-121 (174)
263 3oja_A Leucine-rich immune mol 99.6 2.2E-17 7.5E-22 167.7 -6.4 99 1-101 127-226 (487)
264 2v9t_B SLIT homolog 2 protein 99.6 4.5E-15 1.5E-19 134.4 8.6 99 1-100 39-139 (220)
265 3rgz_A Protein brassinosteroid 99.5 7.1E-15 2.4E-19 157.8 7.4 99 2-100 616-715 (768)
266 3e6j_A Variable lymphocyte rec 99.5 2.1E-14 7E-19 130.8 9.3 101 1-101 47-147 (229)
267 2o6r_A Variable lymphocyte rec 99.5 2.6E-14 8.9E-19 124.6 9.0 104 1-104 35-139 (177)
268 2ifg_A High affinity nerve gro 99.5 3.4E-14 1.2E-18 137.9 9.0 103 2-106 16-120 (347)
269 3m19_A Variable lymphocyte rec 99.5 1.4E-13 4.7E-18 127.2 9.6 101 1-101 66-167 (251)
270 2o6s_A Variable lymphocyte rec 99.5 1.7E-13 5.9E-18 122.7 9.9 101 1-101 35-136 (208)
271 3rfs_A Internalin B, repeat mo 99.5 1.6E-13 5.3E-18 128.4 9.8 100 1-100 92-192 (272)
272 1ogq_A PGIP-2, polygalacturona 99.5 4E-14 1.4E-18 135.3 5.6 101 1-101 57-161 (313)
273 4g8a_A TOLL-like receptor 4; l 99.4 9.7E-14 3.3E-18 145.5 8.3 106 1-106 476-584 (635)
274 1p9a_G Platelet glycoprotein I 99.4 1.8E-13 6.2E-18 129.2 9.3 100 1-101 84-184 (290)
275 2v9t_B SLIT homolog 2 protein 99.4 1.8E-13 6.3E-18 123.7 8.8 104 1-105 63-168 (220)
276 2v70_A SLIT-2, SLIT homolog 2 99.4 1.8E-13 6.2E-18 123.7 8.5 105 1-105 64-169 (220)
277 1w8a_A SLIT protein; signaling 99.4 8.8E-14 3E-18 123.0 5.3 105 1-105 61-165 (192)
278 2o6q_A Variable lymphocyte rec 99.4 4E-13 1.4E-17 125.5 9.6 99 1-99 92-191 (270)
279 3e6j_A Variable lymphocyte rec 99.4 3.5E-13 1.2E-17 122.6 9.0 93 3-99 28-122 (229)
280 2je0_A Acidic leucine-rich nuc 99.4 9.4E-14 3.2E-18 117.4 4.7 98 1-100 24-124 (149)
281 3v47_A TOLL-like receptor 5B a 99.4 3.8E-13 1.3E-17 135.3 9.3 103 2-104 307-410 (455)
282 2ell_A Acidic leucine-rich nuc 99.4 1.9E-13 6.5E-18 118.0 5.3 99 1-101 31-132 (168)
283 4eco_A Uncharacterized protein 99.4 3.1E-13 1.1E-17 141.8 7.5 71 29-100 194-284 (636)
284 1dce_A Protein (RAB geranylger 99.4 4.3E-13 1.5E-17 138.2 8.0 96 1-101 448-545 (567)
285 3m19_A Variable lymphocyte rec 99.4 8.4E-13 2.9E-17 121.9 9.1 101 1-101 42-143 (251)
286 1ozn_A Reticulon 4 receptor; N 99.4 3.9E-13 1.3E-17 126.6 6.9 100 1-100 112-212 (285)
287 4fcg_A Uncharacterized protein 99.4 4.4E-13 1.5E-17 128.9 7.3 97 2-100 158-264 (328)
288 3zyj_A Leucine-rich repeat-con 99.4 8.1E-13 2.8E-17 132.4 8.9 104 1-106 192-296 (440)
289 3tm0_A Aminoglycoside 3'-phosp 99.4 2.3E-12 8E-17 119.7 11.1 144 181-334 13-213 (263)
290 2wfh_A SLIT homolog 2 protein 99.4 1.3E-12 4.4E-17 115.5 8.9 98 1-102 17-115 (193)
291 3vq2_A TLR4, TOLL-like recepto 99.4 6.1E-13 2.1E-17 138.9 7.5 106 1-106 455-562 (606)
292 2o6s_A Variable lymphocyte rec 99.4 1.6E-12 5.4E-17 116.4 9.1 104 1-104 59-163 (208)
293 2z66_A Variable lymphocyte rec 99.4 8.7E-13 3E-17 125.5 7.8 101 1-101 133-235 (306)
294 4ecn_A Leucine-rich repeat pro 99.4 4.8E-13 1.7E-17 143.7 6.7 102 1-102 330-528 (876)
295 4fcg_A Uncharacterized protein 99.4 7.3E-13 2.5E-17 127.4 7.1 100 1-102 190-290 (328)
296 3zyi_A Leucine-rich repeat-con 99.3 1.3E-12 4.4E-17 131.5 8.9 104 1-106 203-307 (452)
297 3g39_A Variable lymphocyte rec 99.3 1.3E-12 4.5E-17 113.0 7.6 85 1-85 37-121 (170)
298 4b8c_D Glucose-repressible alc 99.3 1.3E-12 4.5E-17 138.7 8.4 98 1-101 231-328 (727)
299 2z63_A TOLL-like receptor 4, v 99.3 1.9E-12 6.3E-17 134.1 9.0 106 1-106 428-535 (570)
300 3rfs_A Internalin B, repeat mo 99.3 2.6E-12 8.9E-17 120.1 9.1 99 1-101 70-169 (272)
301 2ell_A Acidic leucine-rich nuc 99.3 8.8E-13 3E-17 113.8 5.3 98 1-101 56-159 (168)
302 2r9u_A Variable lymphocyte rec 99.3 1.2E-12 4.3E-17 113.5 6.1 84 1-86 40-125 (174)
303 4g8a_A TOLL-like receptor 4; l 99.3 1.7E-12 5.7E-17 136.0 8.3 101 1-101 59-160 (635)
304 4ezg_A Putative uncharacterize 99.3 1.3E-12 4.4E-17 116.0 6.1 97 2-100 74-170 (197)
305 2je0_A Acidic leucine-rich nuc 99.3 6.9E-13 2.3E-17 112.0 3.8 95 1-97 49-148 (149)
306 1p9a_G Platelet glycoprotein I 99.3 3.4E-12 1.2E-16 120.4 8.9 98 1-101 62-160 (290)
307 4eco_A Uncharacterized protein 99.3 5.5E-13 1.9E-17 139.9 3.1 99 3-102 192-318 (636)
308 2xot_A Amphoterin-induced prot 99.3 3.5E-12 1.2E-16 124.3 7.9 102 1-102 46-149 (361)
309 2xot_A Amphoterin-induced prot 99.3 3.9E-12 1.4E-16 124.0 7.8 97 2-101 26-124 (361)
310 1dce_A Protein (RAB geranylger 99.3 4.2E-12 1.5E-16 130.8 7.7 83 1-86 470-553 (567)
311 2z62_A TOLL-like receptor 4, v 99.3 6.5E-12 2.2E-16 117.5 8.2 105 1-105 107-240 (276)
312 3a79_B TLR6, VLRB.59, TOLL-lik 99.3 6.2E-12 2.1E-16 130.1 8.7 89 14-105 424-513 (562)
313 3j0a_A TOLL-like receptor 5; m 99.3 2E-12 7E-17 140.1 5.1 101 2-106 459-564 (844)
314 3v47_A TOLL-like receptor 5B a 99.3 5.6E-12 1.9E-16 126.8 7.5 102 1-102 282-384 (455)
315 3t6q_A CD180 antigen; protein- 99.3 3.9E-12 1.3E-16 132.8 6.5 93 12-105 470-563 (606)
316 4ezg_A Putative uncharacterize 99.2 3.6E-12 1.2E-16 113.0 5.1 96 1-100 51-147 (197)
317 2o6r_A Variable lymphocyte rec 99.2 1.5E-11 5E-16 107.0 8.9 98 1-101 14-112 (177)
318 2z66_A Variable lymphocyte rec 99.2 7.8E-12 2.7E-16 118.9 7.7 101 1-101 108-211 (306)
319 2z62_A TOLL-like receptor 4, v 99.2 1.2E-11 4.3E-16 115.6 8.5 101 1-101 35-136 (276)
320 2z7x_B TOLL-like receptor 1, v 99.2 9.1E-12 3.1E-16 127.5 8.1 101 2-105 382-484 (520)
321 2id5_A Lingo-1, leucine rich r 99.2 4.7E-12 1.6E-16 128.2 5.9 105 1-106 231-337 (477)
322 2o6q_A Variable lymphocyte rec 99.2 1.7E-11 5.8E-16 114.4 9.2 101 1-101 68-169 (270)
323 1a9n_A U2A', U2A'; complex (nu 99.2 5E-12 1.7E-16 110.0 5.1 97 1-102 26-126 (176)
324 1ozn_A Reticulon 4 receptor; N 99.2 1.6E-11 5.6E-16 115.4 8.8 101 1-101 39-141 (285)
325 1nd4_A Aminoglycoside 3'-phosp 99.2 3.2E-11 1.1E-15 111.7 10.4 129 191-334 29-214 (264)
326 1wwl_A Monocyte differentiatio 99.2 2.3E-12 7.8E-17 123.0 2.6 99 1-100 70-184 (312)
327 4ecn_A Leucine-rich repeat pro 99.2 2.9E-12 9.9E-17 137.7 3.5 93 9-102 480-586 (876)
328 1a9n_A U2A', U2A'; complex (nu 99.2 1E-11 3.5E-16 108.0 6.2 86 12-101 13-100 (176)
329 3vq2_A TLR4, TOLL-like recepto 99.2 1.7E-11 5.6E-16 128.0 8.6 101 1-101 39-140 (606)
330 1xku_A Decorin; proteoglycan, 99.2 2.6E-11 9E-16 116.5 9.4 98 1-101 178-275 (330)
331 3t6q_A CD180 antigen; protein- 99.2 1.5E-11 5E-16 128.4 7.9 102 1-102 40-142 (606)
332 2z81_A CD282 antigen, TOLL-lik 99.2 1.2E-11 4.1E-16 127.4 6.7 100 1-100 33-134 (549)
333 3oja_B Anopheles plasmodium-re 99.2 2.2E-11 7.5E-16 126.9 8.6 97 2-99 83-181 (597)
334 3zyi_A Leucine-rich repeat-con 99.2 2.1E-11 7.2E-16 122.5 8.2 100 1-100 82-182 (452)
335 2z81_A CD282 antigen, TOLL-lik 99.2 2.3E-11 8E-16 125.3 8.5 101 1-105 394-513 (549)
336 2ft3_A Biglycan; proteoglycan, 99.2 2.6E-11 9E-16 116.6 8.1 79 2-81 201-279 (332)
337 4b8c_D Glucose-repressible alc 99.2 1.1E-11 3.9E-16 131.5 6.0 81 1-84 254-334 (727)
338 1wwl_A Monocyte differentiatio 99.2 6.7E-12 2.3E-16 119.7 3.8 99 1-100 102-212 (312)
339 2id5_A Lingo-1, leucine rich r 99.2 2.4E-11 8.1E-16 123.0 7.7 100 1-101 39-140 (477)
340 2z7x_B TOLL-like receptor 1, v 99.2 1.5E-11 5.1E-16 125.9 5.7 97 1-100 28-126 (520)
341 1ds9_A Outer arm dynein; leuci 99.2 6.3E-13 2.2E-17 118.1 -4.0 97 1-101 25-127 (198)
342 2xwt_C Thyrotropin receptor; s 99.2 1.5E-11 5E-16 112.6 4.9 100 1-101 38-142 (239)
343 3o53_A Protein LRIM1, AGAP0063 99.2 1.9E-11 6.5E-16 116.9 5.7 99 1-101 127-226 (317)
344 3oja_B Anopheles plasmodium-re 99.2 1.4E-11 4.9E-16 128.2 5.2 98 1-101 239-336 (597)
345 3j0a_A TOLL-like receptor 5; m 99.2 2.3E-11 7.9E-16 131.8 6.9 100 1-100 31-134 (844)
346 3a79_B TLR6, VLRB.59, TOLL-lik 99.2 3E-11 1E-15 124.9 7.5 98 1-101 59-158 (562)
347 2z80_A TOLL-like receptor 2, v 99.2 2.7E-11 9.2E-16 117.6 6.5 96 2-100 39-135 (353)
348 3o6n_A APL1; leucine-rich repe 99.2 1.8E-11 6E-16 120.6 5.2 98 1-101 233-330 (390)
349 4glp_A Monocyte differentiatio 99.2 2.5E-11 8.5E-16 115.6 5.9 98 1-101 176-284 (310)
350 2ft3_A Biglycan; proteoglycan, 99.1 5.6E-11 1.9E-15 114.3 8.2 97 1-100 61-158 (332)
351 3zyj_A Leucine-rich repeat-con 99.1 5.4E-11 1.9E-15 119.1 8.2 101 1-101 71-172 (440)
352 3dxp_A Putative acyl-COA dehyd 99.1 2.9E-10 9.9E-15 110.6 13.0 142 187-334 43-248 (359)
353 2ifg_A High affinity nerve gro 99.1 4.7E-11 1.6E-15 115.6 7.0 80 1-81 38-118 (347)
354 3o6n_A APL1; leucine-rich repe 99.1 8.1E-11 2.8E-15 115.9 8.7 97 3-100 54-152 (390)
355 2z63_A TOLL-like receptor 4, v 99.1 1.1E-10 3.6E-15 120.9 8.5 101 1-101 35-136 (570)
356 4glp_A Monocyte differentiatio 99.1 3.7E-11 1.3E-15 114.4 4.7 98 2-99 99-207 (310)
357 1ziw_A TOLL-like receptor 3; i 99.1 9.9E-11 3.4E-15 123.9 8.3 100 1-101 32-133 (680)
358 1xku_A Decorin; proteoglycan, 99.1 2.4E-10 8.3E-15 109.7 10.1 99 1-102 152-253 (330)
359 1ziw_A TOLL-like receptor 3; i 99.1 1.1E-10 3.7E-15 123.6 8.3 99 1-100 56-156 (680)
360 3o53_A Protein LRIM1, AGAP0063 99.1 6.8E-11 2.3E-15 113.0 5.4 96 1-100 106-202 (317)
361 1ds9_A Outer arm dynein; leuci 99.1 2.8E-12 9.5E-17 113.9 -5.1 97 1-102 55-153 (198)
362 1xeu_A Internalin C; cellular 99.1 2.4E-10 8.3E-15 106.0 7.8 63 14-80 37-99 (263)
363 2z80_A TOLL-like receptor 2, v 99.0 1.8E-10 6.2E-15 111.7 6.8 99 1-100 59-160 (353)
364 1xeu_A Internalin C; cellular 99.0 3E-10 1E-14 105.4 7.5 92 1-100 48-139 (263)
365 1h6t_A Internalin B; cell adhe 99.0 3.3E-10 1.1E-14 106.8 7.8 94 1-101 75-168 (291)
366 2xwt_C Thyrotropin receptor; s 99.0 1.2E-10 4E-15 106.5 4.4 99 1-101 62-168 (239)
367 1h6u_A Internalin H; cell adhe 99.0 3.6E-10 1.2E-14 107.5 7.8 94 1-101 92-185 (308)
368 3oja_A Leucine-rich immune mol 99.0 1.3E-10 4.3E-15 117.9 4.8 97 1-101 106-203 (487)
369 1h6t_A Internalin B; cell adhe 99.0 3.3E-10 1.1E-14 106.8 7.3 94 1-101 53-146 (291)
370 1h6u_A Internalin H; cell adhe 99.0 3.8E-10 1.3E-14 107.3 7.7 93 1-100 48-140 (308)
371 4fmz_A Internalin; leucine ric 99.0 4.3E-10 1.5E-14 108.7 6.7 95 1-101 228-323 (347)
372 3sg8_A APH(2'')-ID; antibiotic 99.0 3.3E-10 1.1E-14 107.5 5.4 187 187-387 25-287 (304)
373 1m9s_A Internalin B; cell inva 99.0 7.1E-10 2.4E-14 115.0 8.3 92 1-99 72-163 (605)
374 1m9s_A Internalin B; cell inva 99.0 5.9E-10 2E-14 115.6 7.0 94 1-101 94-187 (605)
375 3cvr_A Invasion plasmid antige 98.9 1E-09 3.5E-14 112.6 7.1 86 1-101 127-219 (571)
376 3bz5_A Internalin-J, INLJ; leu 98.9 1.9E-09 6.6E-14 108.2 8.6 90 1-100 49-138 (457)
377 1o6v_A Internalin A; bacterial 98.9 9.8E-10 3.4E-14 110.8 6.4 93 1-100 272-364 (466)
378 3cvr_A Invasion plasmid antige 98.9 1.7E-09 5.9E-14 111.0 8.1 86 1-100 66-151 (571)
379 1jl5_A Outer protein YOPM; leu 98.9 1.9E-10 6.7E-15 115.4 -0.3 55 1-56 18-85 (454)
380 1jl5_A Outer protein YOPM; leu 98.8 4.4E-09 1.5E-13 105.5 8.6 74 19-99 132-205 (454)
381 1o6v_A Internalin A; bacterial 98.8 3.9E-09 1.3E-13 106.4 8.0 91 2-99 229-319 (466)
382 3bz5_A Internalin-J, INLJ; leu 98.8 4.8E-09 1.6E-13 105.3 8.2 74 1-83 177-250 (457)
383 3goz_A Leucine-rich repeat-con 98.8 6.1E-10 2.1E-14 108.4 1.2 100 1-100 5-120 (362)
384 4fmz_A Internalin; leucine ric 98.8 6E-09 2.1E-13 100.6 7.8 95 1-102 51-145 (347)
385 2ast_B S-phase kinase-associat 98.8 7.6E-10 2.6E-14 106.4 0.1 99 1-100 77-179 (336)
386 2ca6_A RAN GTPase-activating p 98.8 5.2E-10 1.8E-14 109.9 -1.3 100 1-100 166-285 (386)
387 3rw6_A Nuclear RNA export fact 98.8 2.2E-09 7.6E-14 98.8 2.5 68 15-84 167-238 (267)
388 2ast_B S-phase kinase-associat 98.7 4.3E-10 1.5E-14 108.1 -2.5 100 1-100 100-206 (336)
389 4ay9_X Follicle-stimulating ho 98.7 6.9E-09 2.3E-13 100.5 5.9 96 2-101 17-116 (350)
390 4ay9_X Follicle-stimulating ho 98.7 5.8E-09 2E-13 100.9 5.4 98 1-99 37-138 (350)
391 3g06_A SSPH2 (leucine-rich rep 98.7 1.4E-08 4.8E-13 105.4 8.2 74 19-100 222-295 (622)
392 2ca6_A RAN GTPase-activating p 98.7 1.4E-09 4.7E-14 106.9 -0.3 100 1-100 129-255 (386)
393 3d1u_A Putative fructosamine-3 98.7 1.1E-07 3.8E-12 89.0 10.9 140 186-333 19-215 (288)
394 3goz_A Leucine-rich repeat-con 98.6 3.8E-09 1.3E-13 102.7 0.8 101 1-101 29-150 (362)
395 3r70_A Aminoglycoside phosphot 98.6 1.3E-07 4.4E-12 90.2 11.2 136 184-335 39-238 (320)
396 3g06_A SSPH2 (leucine-rich rep 98.6 3.8E-08 1.3E-12 102.1 7.6 86 1-100 47-132 (622)
397 4gkh_A Aminoglycoside 3'-phosp 98.6 2.9E-07 1E-11 85.4 10.7 135 189-334 31-223 (272)
398 3tdw_A Gentamicin resistance p 98.5 1.3E-06 4.3E-11 82.7 12.4 136 187-334 24-224 (306)
399 3rw6_A Nuclear RNA export fact 98.4 1.2E-07 4.3E-12 87.1 4.7 70 1-72 177-257 (267)
400 3ats_A Putative uncharacterize 98.4 1.2E-06 4.2E-11 84.7 10.4 83 187-269 25-122 (357)
401 3ovc_A Hygromycin-B 4-O-kinase 98.4 1.9E-06 6.5E-11 83.5 11.1 140 187-334 46-243 (362)
402 1z7x_W Ribonuclease inhibitor; 98.3 2.5E-08 8.6E-13 100.1 -3.6 100 1-100 263-381 (461)
403 1z7x_W Ribonuclease inhibitor; 98.2 1.9E-07 6.5E-12 93.6 -0.0 101 1-101 291-410 (461)
404 3un9_A NLR family member X1; l 98.1 1.6E-07 5.6E-12 91.3 -1.7 84 17-100 154-250 (372)
405 2olc_A MTR kinase, methylthior 98.1 1.5E-05 5E-10 78.3 10.4 77 187-265 35-120 (397)
406 2q83_A YTAA protein; 2635576, 98.1 2.3E-05 7.8E-10 75.0 11.5 139 188-333 38-251 (346)
407 3jr1_A Putative fructosamine-3 98.0 4.5E-05 1.5E-09 71.9 13.1 137 187-330 41-232 (312)
408 3un9_A NLR family member X1; l 98.0 6.1E-07 2.1E-11 87.3 0.1 80 1-80 162-253 (372)
409 3f7w_A Putative fructosamine-3 98.0 3.2E-05 1.1E-09 72.2 10.8 77 185-267 18-97 (288)
410 3ogk_B Coronatine-insensitive 97.8 1E-06 3.5E-11 91.3 -3.1 88 13-100 431-524 (592)
411 2pyw_A Uncharacterized protein 97.8 0.00011 3.7E-09 72.6 11.5 80 303-384 231-313 (420)
412 3sb4_A Hypothetical leucine ri 97.8 2.4E-05 8.2E-10 74.6 6.3 80 17-100 225-308 (329)
413 1io0_A Tropomodulin; LRR prote 97.8 2.2E-06 7.5E-11 74.6 -1.3 88 13-100 31-134 (185)
414 3csv_A Aminoglycoside phosphot 97.5 0.00035 1.2E-08 66.5 9.9 140 188-334 24-217 (333)
415 1io0_A Tropomodulin; LRR prote 97.5 1.5E-05 5.3E-10 69.2 -0.0 100 1-100 43-162 (185)
416 3ogk_B Coronatine-insensitive 97.5 4.4E-05 1.5E-09 78.8 3.4 75 1-76 171-253 (592)
417 3rfe_A Platelet glycoprotein I 97.4 0.00012 4.2E-09 59.3 4.8 52 22-76 12-65 (130)
418 2p1m_B Transport inhibitor res 97.4 7.5E-06 2.6E-10 84.7 -3.3 64 15-79 429-494 (594)
419 3dxq_A Choline/ethanolamine ki 97.4 0.00072 2.5E-08 63.3 10.7 72 186-267 22-95 (301)
420 2p1m_B Transport inhibitor res 97.3 2.8E-05 9.5E-10 80.4 -0.2 86 15-100 102-195 (594)
421 1zyl_A Hypothetical protein YI 97.3 0.0011 3.8E-08 62.8 10.8 141 188-334 32-223 (328)
422 2ppq_A HSK, HK, homoserine kin 97.3 0.00072 2.5E-08 63.9 9.4 142 187-333 27-216 (322)
423 3rfe_A Platelet glycoprotein I 97.3 0.00025 8.5E-09 57.5 5.2 60 45-106 11-72 (130)
424 2ra8_A Uncharacterized protein 97.2 7E-05 2.4E-09 72.2 0.9 85 16-100 217-318 (362)
425 3sb4_A Hypothetical leucine ri 97.2 0.00031 1.1E-08 66.8 5.3 90 1-94 233-326 (329)
426 1nw1_A Choline kinase (49.2 KD 97.2 0.00088 3E-08 66.2 8.5 72 188-267 79-159 (429)
427 3feg_A Choline/ethanolamine ki 96.9 0.0043 1.5E-07 59.9 10.8 140 188-334 56-254 (379)
428 3c5i_A Choline kinase; choline 96.9 0.0021 7.3E-08 62.0 8.3 73 188-267 39-121 (369)
429 2yle_A Protein spire homolog 1 96.9 0.0051 1.7E-07 53.8 9.4 103 265-386 33-135 (229)
430 2qg7_A Ethanolamine kinase PV0 96.8 0.01 3.4E-07 58.9 12.5 74 187-267 113-188 (458)
431 3i1a_A Spectinomycin phosphotr 96.8 0.014 4.6E-07 55.6 12.6 32 303-334 205-236 (339)
432 2ra8_A Uncharacterized protein 96.5 0.00028 9.6E-09 68.0 -1.1 85 16-100 191-290 (362)
433 3e4g_A ATP synthase subunit S, 96.3 0.00066 2.3E-08 57.8 0.1 91 9-99 52-149 (176)
434 4fdw_A Leucine rich hypothetic 96.1 0.0073 2.5E-07 59.0 6.2 83 12-99 265-355 (401)
435 3e4g_A ATP synthase subunit S, 95.8 0.0016 5.5E-08 55.4 0.2 68 12-79 79-153 (176)
436 3f2s_A CK, chetk-alpha, cholin 95.8 0.038 1.3E-06 53.6 9.7 143 188-334 58-280 (401)
437 3mes_A Choline kinase; malaria 95.5 0.074 2.5E-06 52.1 10.8 139 188-334 76-291 (424)
438 4fdw_A Leucine rich hypothetic 94.9 0.03 1E-06 54.6 5.8 82 12-99 152-236 (401)
439 1pgv_A TMD-1, tropomodulin TMD 94.6 0.011 3.6E-07 51.3 1.6 64 16-79 39-111 (197)
440 1pgv_A TMD-1, tropomodulin TMD 93.0 0.036 1.2E-06 47.9 1.9 66 12-77 64-137 (197)
441 4gt6_A Cell surface protein; l 91.3 0.38 1.3E-05 46.4 7.3 59 37-99 306-367 (394)
442 4h09_A Hypothetical leucine ri 90.9 0.42 1.4E-05 45.8 7.0 63 13-79 235-299 (379)
443 4ann_A ESSB; membrane protein, 90.9 1.8 6E-05 37.7 10.2 124 230-389 36-159 (215)
444 4gt6_A Cell surface protein; l 90.0 0.25 8.6E-06 47.7 4.6 63 12-78 305-369 (394)
445 4fs7_A Uncharacterized protein 89.6 0.34 1.2E-05 46.7 5.2 59 14-76 293-353 (394)
446 4h09_A Hypothetical leucine ri 89.3 0.47 1.6E-05 45.4 5.9 83 12-99 257-343 (379)
447 4fs7_A Uncharacterized protein 89.0 0.36 1.2E-05 46.6 4.8 61 12-76 314-376 (394)
448 3g15_A CK, chetk-alpha, cholin 88.5 0.22 7.4E-06 48.4 2.9 29 306-334 246-280 (401)
449 4ano_A ESSB; membrane protein, 86.8 4.6 0.00016 35.2 9.9 116 238-389 48-164 (219)
450 3cxl_A N-chimerin; SH2, RHO-GA 86.4 0.083 2.8E-06 52.4 -1.6 61 187-250 147-214 (463)
451 2jwa_A Receptor tyrosine-prote 66.0 2.3 7.9E-05 26.4 1.2 10 137-146 18-27 (44)
452 1cja_A Protein (actin-fragmin 59.1 35 0.0012 31.6 8.3 134 190-334 77-237 (342)
453 2ks1_B Epidermal growth factor 56.7 11 0.00037 23.4 3.0 7 151-157 33-39 (44)
454 2l2t_A Receptor tyrosine-prote 54.4 6.2 0.00021 24.5 1.7 7 151-157 32-38 (44)
455 3ls8_A Phosphatidylinositol 3- 40.5 1.4E+02 0.0049 30.2 10.0 83 243-333 402-501 (614)
456 3hhm_A Phosphatidylinositol-4, 32.2 1.5E+02 0.0052 32.2 9.1 60 266-333 899-961 (1091)
457 2lz0_A Uncharacterized protein 21.4 1.6E+02 0.0055 21.5 5.1 38 12-51 14-52 (100)
458 2x6h_A GH13170P, VPS34, phosph 20.8 53 0.0018 33.9 3.0 82 244-333 477-575 (696)
No 1
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=9.4e-59 Score=442.28 Aligned_cols=259 Identities=22% Similarity=0.368 Sum_probs=214.9
Q ss_pred hccCCcceEcccCCcceEEEEcC------CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCee
Q 012213 182 ECVKDNNVIGRGGAGVVYRGVTP------NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETN 255 (468)
Q Consensus 182 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 255 (468)
..++..+.||+|+||+||+|.+. +++.||||+++.... ....++|.+|+.++++++|||||+++|+|.+++..
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~-~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~ 104 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAE-GPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPL 104 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CC-C-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccC-hHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEE
Confidence 34556688999999999999862 467899999875432 33346799999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhcccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC
Q 012213 256 LLVYEYMPNGSLGEVLHGKR--------------GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321 (468)
Q Consensus 256 ~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 321 (468)
+||||||++|+|.++|.... ...++|.++++|+.|||+||+|||+.+ ||||||||+|||++++
T Consensus 105 ~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~ 181 (308)
T 4gt4_A 105 SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDK 181 (308)
T ss_dssp EEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGG
T ss_pred EEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCC
Confidence 99999999999999996432 235899999999999999999999877 9999999999999999
Q ss_pred CceEEeeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHH
Q 012213 322 FEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQW 400 (468)
Q Consensus 322 ~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~ 400 (468)
+.+||+|||+|+.+.............||+.|||||++.+..++.++|||||||++|||+| |+.||.+.... ++.
T Consensus 182 ~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~--~~~-- 257 (308)
T 4gt4_A 182 LNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--DVV-- 257 (308)
T ss_dssp GCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH--HHH--
T ss_pred CCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH--HHH--
Confidence 9999999999997764444444556789999999999999999999999999999999999 89999764311 111
Q ss_pred HHHhhcccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213 401 TKMQTNSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ 460 (468)
Q Consensus 401 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 460 (468)
..+.+......+..++..+.+++..||+.||++||||.||++.|+.+.
T Consensus 258 ------------~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 258 ------------EMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp ------------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred ------------HHHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 111222223344556677889999999999999999999999999764
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.3e-59 Score=444.67 Aligned_cols=260 Identities=24% Similarity=0.406 Sum_probs=214.1
Q ss_pred hccCCcceEcccCCcceEEEEcC------CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCee
Q 012213 182 ECVKDNNVIGRGGAGVVYRGVTP------NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETN 255 (468)
Q Consensus 182 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 255 (468)
++|...+.||+|+||+||+|.+. ++..||||+++... ....++|.+|++++++++|||||+++|+|.+++..
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 90 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS--DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL 90 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC--HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC--hHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEE
Confidence 45677889999999999999864 47789999986432 23346799999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhcccCC-----------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCce
Q 012213 256 LLVYEYMPNGSLGEVLHGKR-----------GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEA 324 (468)
Q Consensus 256 ~lv~e~~~~gsL~~~l~~~~-----------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~ 324 (468)
+||||||++|+|.++|+... ...++|.++++++.|||+||+|||+.+ |+||||||+|||+++++.+
T Consensus 91 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~ 167 (299)
T 4asz_A 91 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLV 167 (299)
T ss_dssp EEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCE
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcE
Confidence 99999999999999997532 346999999999999999999999877 9999999999999999999
Q ss_pred EEeeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHH
Q 012213 325 HVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKM 403 (468)
Q Consensus 325 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 403 (468)
||+|||+|+...............||+.|||||++.+..++.++|||||||++|||+| |+.||.+.... .+
T Consensus 168 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~--~~------ 239 (299)
T 4asz_A 168 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--EV------ 239 (299)
T ss_dssp EECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HH------
T ss_pred EECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HH------
Confidence 9999999987654433334445679999999999999999999999999999999999 99999764311 11
Q ss_pred hhcccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCC
Q 012213 404 QTNSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKP 462 (468)
Q Consensus 404 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~ 462 (468)
+..+........+...+.++.+++..||+.||++||||+||++.|+++.+.
T Consensus 240 --------~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 240 --------IECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp --------HHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --------HHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 111222222333445567788999999999999999999999999987543
No 3
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=2.2e-58 Score=437.98 Aligned_cols=263 Identities=29% Similarity=0.389 Sum_probs=207.1
Q ss_pred hhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEe
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYE 260 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 260 (468)
.+.+...+.||+|+||+||+|.+++ .||||+++.........+.|.+|+.++++++|||||+++|+|.+ +..+||||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 4566778999999999999998853 59999987554444445779999999999999999999999865 56899999
Q ss_pred ccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccCC
Q 012213 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGA 340 (468)
Q Consensus 261 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 340 (468)
||++|+|.++|+.. ...++|.++.+|+.|||.||+|||+.+ ||||||||+|||+++++.+||+|||+|+.......
T Consensus 112 y~~gGsL~~~l~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~ 187 (307)
T 3omv_A 112 WCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp CCSSCBHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC------
T ss_pred cCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceecccCCc
Confidence 99999999999743 346999999999999999999999877 99999999999999999999999999987754444
Q ss_pred CccccccccCccccCccccCC---CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcc
Q 012213 341 SECMSAVAGSYGYIAPEYAYT---LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILD 417 (468)
Q Consensus 341 ~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 417 (468)
........||+.|||||++.+ ..|+.++|||||||++|||+||+.||.+.... ......... ....
T Consensus 188 ~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~-----~~~~~~~~~------~~~~ 256 (307)
T 3omv_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR-----DQIIFMVGR------GYAS 256 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-----HHHHHHHHT------TCCC
T ss_pred ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH-----HHHHHHHhc------CCCC
Confidence 444566789999999999853 46899999999999999999999999763321 111111111 1112
Q ss_pred ccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccC
Q 012213 418 QRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQK 461 (468)
Q Consensus 418 ~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 461 (468)
+.+...+...+..+.+++..||+.||++||||.||++.|+.++.
T Consensus 257 p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~ 300 (307)
T 3omv_A 257 PDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp CCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred CCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 22233344556778899999999999999999999999998764
No 4
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=2.2e-58 Score=443.84 Aligned_cols=259 Identities=25% Similarity=0.388 Sum_probs=205.3
Q ss_pred hccCCcceEcccCCcceEEEEcC------CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCee
Q 012213 182 ECVKDNNVIGRGGAGVVYRGVTP------NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETN 255 (468)
Q Consensus 182 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 255 (468)
+++...+.||+|+||+||+|.++ +++.||||+++... ....++|.+|++++++++|||||+++|+|.+.+..
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~--~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~ 118 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS--ESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPL 118 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS--HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC--HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence 45666789999999999999864 47889999986432 23346799999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhcccCC-------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC
Q 012213 256 LLVYEYMPNGSLGEVLHGKR-------------GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF 322 (468)
Q Consensus 256 ~lv~e~~~~gsL~~~l~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 322 (468)
+||||||++|+|.++++... ...++|.++++|+.|||+||+|||+.+ |+||||||+|||+++++
T Consensus 119 ~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~ 195 (329)
T 4aoj_A 119 LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGL 195 (329)
T ss_dssp EEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTT
T ss_pred EEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCC
Confidence 99999999999999997532 236999999999999999999999877 99999999999999999
Q ss_pred ceEEeeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHH
Q 012213 323 EAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWT 401 (468)
Q Consensus 323 ~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~ 401 (468)
.+||+|||+|+.+.............||+.|||||++.+..++.++|||||||++|||+| |+.||.+.... .+..
T Consensus 196 ~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~--~~~~-- 271 (329)
T 4aoj_A 196 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT--EAID-- 271 (329)
T ss_dssp EEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH--HHHH--
T ss_pred cEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH--HHHH--
Confidence 999999999997754444444456789999999999999999999999999999999999 99999763311 1111
Q ss_pred HHhhcccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccC
Q 012213 402 KMQTNSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQK 461 (468)
Q Consensus 402 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 461 (468)
.+........+...+..+.+++.+||+.||++||||+||++.|+.+..
T Consensus 272 ------------~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 272 ------------CITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp ------------HHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred ------------HHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 111111223344456778899999999999999999999999998854
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=8.8e-57 Score=432.92 Aligned_cols=253 Identities=24% Similarity=0.368 Sum_probs=207.3
Q ss_pred hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 259 (468)
.++|+..+.||+|+||+||+|.+ .+|+.||||++..........+.+.+|+.++++++|||||++++++.+++..+|||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 46788999999999999999997 46899999999755444444567999999999999999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccC
Q 012213 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTG 339 (468)
Q Consensus 260 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 339 (468)
||+++|+|.+++.......+++.++..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+|+.+...
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~- 178 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST- 178 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCHH-
T ss_pred eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeecCC-
Confidence 9999999999998666667899999999999999999999887 999999999999999999999999999876421
Q ss_pred CCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcccc
Q 012213 340 ASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQR 419 (468)
Q Consensus 340 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 419 (468)
.......+||+.|||||++.+..|+.++|||||||++|||+||++||.+.+ ..+. +.++....
T Consensus 179 -~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-----~~~~-----------~~~i~~~~ 241 (350)
T 4b9d_A 179 -VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS-----MKNL-----------VLKIISGS 241 (350)
T ss_dssp -HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHH-----------HHHHHHTC
T ss_pred -cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-----HHHH-----------HHHHHcCC
Confidence 122345679999999999999999999999999999999999999997532 1111 11222222
Q ss_pred CCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 420 LSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 420 ~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
....+......+.+++.+||+.||++|||++|+++
T Consensus 242 ~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 242 FPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 22223344567888999999999999999999986
No 6
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.8e-55 Score=417.45 Aligned_cols=272 Identities=27% Similarity=0.337 Sum_probs=202.7
Q ss_pred hccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCC----eeEE
Q 012213 182 ECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKE----TNLL 257 (468)
Q Consensus 182 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~l 257 (468)
+.+...+.||+|+||+||+|.+ +|+.||||++.... .....++.|+..+.+++|||||+++|+|.+++ ..+|
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~l 78 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEE
Confidence 3466778999999999999998 58999999985422 21233455677778899999999999997654 5799
Q ss_pred EEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcC-----CCCeeecCCCCCcEEEcCCCceEEeecccc
Q 012213 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDC-----SPLIIHRDVKSNNILLNSDFEAHVADFGLA 332 (468)
Q Consensus 258 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivH~dlk~~Nill~~~~~~kl~Dfgla 332 (468)
||||+++|+|.++++.. .++|..+.+++.|+|+||+|||+.+ .++|+||||||+|||++.++++||+|||+|
T Consensus 79 V~Ey~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla 155 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp EEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EecCCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCC
Confidence 99999999999999753 4899999999999999999999761 335999999999999999999999999999
Q ss_pred ccccccCCC--ccccccccCccccCccccCCC------CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCc---------
Q 012213 333 KYLQDTGAS--ECMSAVAGSYGYIAPEYAYTL------KVDEKSDVYSFGVVLLELITGRRPVGDFGEEGL--------- 395 (468)
Q Consensus 333 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~--------- 395 (468)
+........ .......||+.|||||++.+. .++.++|||||||++|||+||++||........
T Consensus 156 ~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~ 235 (303)
T 3hmm_A 156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 235 (303)
T ss_dssp EEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred ccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhccccc
Confidence 877533222 122346799999999998754 467899999999999999999888754221111
Q ss_pred -CHHHHHHHhhcccccchhhhccccCCC--CCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCCCCccC
Q 012213 396 -DIVQWTKMQTNSSKEGVVKILDQRLSN--TPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKPNTFQM 467 (468)
Q Consensus 396 -~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~~~~~~ 467 (468)
....+..... ....++.+.. ...+....+.+++.+||+.||++||||.||+++|+++...+..+|
T Consensus 236 ~~~~~~~~~~~-------~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~~ik~ 303 (303)
T 3hmm_A 236 PSVEEMRKVVC-------EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGIKM 303 (303)
T ss_dssp CCHHHHHHHHT-------TSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-----
T ss_pred chHHHHHHHHh-------cccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHcCCCC
Confidence 1111111111 1111222211 123566778899999999999999999999999999977665543
No 7
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=8.4e-55 Score=418.45 Aligned_cols=256 Identities=23% Similarity=0.327 Sum_probs=209.4
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 259 (468)
.+.|+..+.||+|+||+||+|.++ +|+.||||++..... ...+.+.+|+.+|++++|||||++++++.+++..+|||
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm 150 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 150 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC--SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 456777889999999999999985 689999999965433 23366899999999999999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccC
Q 012213 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTG 339 (468)
Q Consensus 260 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 339 (468)
|||++|+|.+++... .+++.++..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+|+.+...
T Consensus 151 Ey~~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~- 223 (346)
T 4fih_A 151 EFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE- 223 (346)
T ss_dssp CCCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSS-
T ss_pred eCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCC-
Confidence 999999999999743 4899999999999999999999888 999999999999999999999999999877532
Q ss_pred CCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcccc
Q 012213 340 ASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQR 419 (468)
Q Consensus 340 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 419 (468)
.......+||+.|||||++.+..|+.++|||||||++|||++|++||.+.+. ..... .. .+.....
T Consensus 224 -~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~--~i---------~~~~~~~ 289 (346)
T 4fih_A 224 -VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMK--MI---------RDNLPPR 289 (346)
T ss_dssp -SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHH--HH---------HHSSCCC
T ss_pred -CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHH--HH---------HcCCCCC
Confidence 2234567899999999999999999999999999999999999999975321 11111 10 0000011
Q ss_pred CCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH--HHHhcc
Q 012213 420 LSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ--MLAQAQ 460 (468)
Q Consensus 420 ~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~--~L~~~~ 460 (468)
..........+.+++.+|++.||++|||++|+++ .+.+..
T Consensus 290 -~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~ 331 (346)
T 4fih_A 290 -LKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 331 (346)
T ss_dssp -CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCC
T ss_pred -CCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCC
Confidence 1112234567788999999999999999999987 455443
No 8
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.1e-54 Score=416.55 Aligned_cols=253 Identities=26% Similarity=0.301 Sum_probs=203.7
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 259 (468)
.+.|+..+.||+|+||+||+|.++ +|+.||||++.... ...+|+.+++.++|||||++++++.+++..+|||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-------~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivm 129 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-------FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFM 129 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-------CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-------hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 456777889999999999999974 68999999986422 1347999999999999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC-ceEEeecccccccccc
Q 012213 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF-EAHVADFGLAKYLQDT 338 (468)
Q Consensus 260 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfgla~~~~~~ 338 (468)
||+++|+|.++++.. ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++ .+||+|||+|+.+...
T Consensus 130 Ey~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~ 204 (336)
T 4g3f_A 130 ELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 204 (336)
T ss_dssp CCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred eccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCC
Confidence 999999999999743 35999999999999999999999777 99999999999999987 6999999999987543
Q ss_pred CCCc---cccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhh
Q 012213 339 GASE---CMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKI 415 (468)
Q Consensus 339 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (468)
+... .....+||+.|||||++.+..|+.++|||||||++|||+||++||.+...... ..... ...
T Consensus 205 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~--~~~i~---~~~------- 272 (336)
T 4g3f_A 205 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL--CLKIA---SEP------- 272 (336)
T ss_dssp ---------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC--HHHHH---HSC-------
T ss_pred CcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH--HHHHH---cCC-------
Confidence 2221 22346799999999999999999999999999999999999999976432221 11110 000
Q ss_pred ccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhc
Q 012213 416 LDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQA 459 (468)
Q Consensus 416 ~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 459 (468)
......+......+.+++.+||+.||++|||+.|+++.|..+
T Consensus 273 --~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~ 314 (336)
T 4g3f_A 273 --PPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKA 314 (336)
T ss_dssp --CGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred --CCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHH
Confidence 001112234456778899999999999999999999887654
No 9
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=2e-55 Score=426.59 Aligned_cols=263 Identities=26% Similarity=0.393 Sum_probs=213.0
Q ss_pred hhccCCcceEcccCCcceEEEEcCC------CcEEEEEEecccCCCCCchhHHHHHHHHHhCCCC-CCccceeEEEecC-
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPN------GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRH-RNIVRLKAFCSNK- 252 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~- 252 (468)
.++|+..+.||+|+||+||+|.+.. ++.||||++..... ....+.|.+|+++|.+++| ||||+++|+|.+.
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~-~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~ 141 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 141 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccC-hHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecC
Confidence 4678888999999999999998642 35799999864332 2234578999999999965 8999999999764
Q ss_pred CeeEEEEeccCCCChhhhcccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEE
Q 012213 253 ETNLLVYEYMPNGSLGEVLHGKR--------------GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318 (468)
Q Consensus 253 ~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill 318 (468)
+..++|||||++|+|.++|+... ...++|.++..++.|||+||+|||+.+ ||||||||+|||+
T Consensus 142 ~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRDLK~~NILl 218 (353)
T 4ase_A 142 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILL 218 (353)
T ss_dssp SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCccCccceee
Confidence 56899999999999999997532 235899999999999999999999877 9999999999999
Q ss_pred cCCCceEEeeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCH
Q 012213 319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDI 397 (468)
Q Consensus 319 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~ 397 (468)
++++.+||+|||+|+.+.............||+.|||||++.+..|+.++|||||||++|||+| |+.||.+..... .+
T Consensus 219 ~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~-~~ 297 (353)
T 4ase_A 219 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EF 297 (353)
T ss_dssp CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HH
T ss_pred CCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH-HH
Confidence 9999999999999997764444444556789999999999999999999999999999999998 999997643211 11
Q ss_pred HHHHHHhhcccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCC
Q 012213 398 VQWTKMQTNSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKP 462 (468)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~ 462 (468)
.. .+.+......+.....++.+++..||+.||++||||.||++.|+++...
T Consensus 298 ~~--------------~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 298 CR--------------RLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp HH--------------HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HH--------------HHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 11 1111111223334556788899999999999999999999999887543
No 10
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=5.1e-55 Score=413.83 Aligned_cols=251 Identities=22% Similarity=0.274 Sum_probs=208.6
Q ss_pred hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCC-CCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITK-GSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
.++|+..+.||+|+||+||+|.+ .+|+.||||++..... .....+.+.+|++++++++|||||++++++.+++..++|
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 35688889999999999999997 4689999999864321 223346789999999999999999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
|||+++|+|.+++... ..+++.++..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+|+.+...
T Consensus 111 mEy~~gG~L~~~i~~~--~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~ 185 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE 185 (311)
T ss_dssp ECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceecCCC
Confidence 9999999999999643 35999999999999999999999888 999999999999999999999999999987644
Q ss_pred CCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccc
Q 012213 339 GASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQ 418 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 418 (468)
.........+||+.|||||++.+..|+.++||||+||++|||+||++||.+.+. .+. ..++...
T Consensus 186 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-----~~~-----------~~~i~~~ 249 (311)
T 4aw0_A 186 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE-----GLI-----------FAKIIKL 249 (311)
T ss_dssp TTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHH-----------HHHHHHT
T ss_pred CCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHH-----------HHHHHcC
Confidence 444455678899999999999999999999999999999999999999975321 111 1111111
Q ss_pred cCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHH
Q 012213 419 RLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVV 453 (468)
Q Consensus 419 ~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~ 453 (468)
.. ..+.....++.+++.+|++.||++|||++|++
T Consensus 250 ~~-~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 250 EY-DFPEKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp CC-CCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred CC-CCCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 11 12223345678899999999999999999863
No 11
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=3.4e-54 Score=406.20 Aligned_cols=249 Identities=28% Similarity=0.402 Sum_probs=197.1
Q ss_pred cCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEec----CCeeEEE
Q 012213 184 VKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSN----KETNLLV 258 (468)
Q Consensus 184 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv 258 (468)
++..+.||+|+||+||+|.+. ++..||||++..........+.|.+|++++++++|||||++++++.+ +...+||
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 355678999999999999974 58899999997654444445679999999999999999999999865 3457899
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC-CCceEEeeccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS-DFEAHVADFGLAKYLQD 337 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfgla~~~~~ 337 (468)
||||++|+|.+++... ..+++..+..++.||+.||+|||+.+ ++|+||||||+|||++. ++.+||+|||+|+....
T Consensus 108 mEy~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 108 TELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp EECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 9999999999999643 45899999999999999999999653 34999999999999985 79999999999985431
Q ss_pred cCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcc
Q 012213 338 TGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILD 417 (468)
Q Consensus 338 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 417 (468)
......+||+.|||||++.+ .|+.++|||||||++|||+||+.||.+... ............ .
T Consensus 185 ----~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~----~~~~~~~i~~~~--------~ 247 (290)
T 3fpq_A 185 ----SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN----AAQIYRRVTSGV--------K 247 (290)
T ss_dssp ----TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS----HHHHHHHHTTTC--------C
T ss_pred ----CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc----HHHHHHHHHcCC--------C
Confidence 23346789999999998865 699999999999999999999999975321 111111111110 0
Q ss_pred ccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 418 QRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 418 ~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
+ ...+.....++.+++.+||+.||++|||++|+++
T Consensus 248 ~--~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 248 P--ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp C--GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred C--CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0 0011112345778999999999999999999975
No 12
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.6e-53 Score=419.57 Aligned_cols=258 Identities=23% Similarity=0.337 Sum_probs=210.9
Q ss_pred hhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213 180 ILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 180 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
..+.|+..+.||+|+||.||+|.+. +|+.||||++..... ...+.+.+|+.+|+.++|||||++++++.+++..+||
T Consensus 149 p~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~--~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iV 226 (423)
T 4fie_A 149 PRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 226 (423)
T ss_dssp GGGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC--SSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch--hHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEE
Confidence 3567888899999999999999984 689999999964432 3346789999999999999999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
||||++|+|.+++... .+++.++..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+|+.+...
T Consensus 227 mEy~~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~ 300 (423)
T 4fie_A 227 MEFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE 300 (423)
T ss_dssp EECCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSS
T ss_pred EeCCCCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCCC
Confidence 9999999999999643 4899999999999999999999888 999999999999999999999999999877532
Q ss_pred CCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccc
Q 012213 339 GASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQ 418 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 418 (468)
.......+||+.|||||++.+..|+.++|||||||++|||++|++||.+... ..... . +......
T Consensus 301 --~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~--~~~~~---~--------i~~~~~~ 365 (423)
T 4fie_A 301 --VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMK---M--------IRDNLPP 365 (423)
T ss_dssp --CCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHH---H--------HHHSCCC
T ss_pred --CccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH--HHHHH---H--------HHcCCCC
Confidence 2234567899999999999999999999999999999999999999975321 11111 1 0010111
Q ss_pred cCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH--HHHhccC
Q 012213 419 RLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ--MLAQAQK 461 (468)
Q Consensus 419 ~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~--~L~~~~~ 461 (468)
.+ .........+.+++.+||..||++|||+.|+++ .|.+..+
T Consensus 366 ~~-~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~~ 409 (423)
T 4fie_A 366 RL-KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 409 (423)
T ss_dssp CC-SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred CC-cccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCCCC
Confidence 11 111223456788999999999999999999987 4555443
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.8e-53 Score=396.57 Aligned_cols=248 Identities=23% Similarity=0.325 Sum_probs=190.0
Q ss_pred hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCC-CCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITK-GSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
..+|+..+.||+|+||+||+|.+ .+|+.||||++..... .......+.+|+.++++++|||||++++++.+++..++|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 45788899999999999999997 4689999999865432 223346789999999999999999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
|||+ +|+|.+++... ..+++.++..++.||+.||+|||+.+ |+||||||+|||+++++.+||+|||+|+.....
T Consensus 92 mEy~-~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~ 165 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp EECC-CEEHHHHHHHS--CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred EeCC-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence 9999 68999998643 35999999999999999999999887 999999999999999999999999999876432
Q ss_pred CCCccccccccCccccCccccCCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcc
Q 012213 339 GASECMSAVAGSYGYIAPEYAYTLKV-DEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILD 417 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 417 (468)
......+||+.|||||++.+..+ +.++||||+||++|||+||+.||.+.+ ......... .
T Consensus 166 ---~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~-----~~~~~~~i~-----------~ 226 (275)
T 3hyh_A 166 ---NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES-----IPVLFKNIS-----------N 226 (275)
T ss_dssp ------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHH-----------H
T ss_pred ---CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHH-----------c
Confidence 22345789999999999998876 579999999999999999999997522 111111111 1
Q ss_pred ccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 418 QRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 418 ~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.. ...+......+.+++.+|++.||++|||++|+++
T Consensus 227 ~~-~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 227 GV-YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp TC-CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CC-CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 11 1112233456788999999999999999999987
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=4.5e-54 Score=407.36 Aligned_cols=249 Identities=24% Similarity=0.270 Sum_probs=197.2
Q ss_pred hccCCcceEcccCCcceEEEEcC----CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEE
Q 012213 182 ECVKDNNVIGRGGAGVVYRGVTP----NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLL 257 (468)
Q Consensus 182 ~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 257 (468)
++|+..+.||+|+||+||+|+.. .++.||||++............+.+|++++++++|||||++++++.+++..++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 56888999999999999999862 46789999986543322333468899999999999999999999999999999
Q ss_pred EEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccc
Q 012213 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQD 337 (468)
Q Consensus 258 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 337 (468)
||||+++|+|.+++... ..+++.++..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+|+....
T Consensus 104 vmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp EECCCTTCEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EEEcCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 99999999999999643 35899999999999999999999887 99999999999999999999999999986542
Q ss_pred cCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcc
Q 012213 338 TGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILD 417 (468)
Q Consensus 338 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 417 (468)
. .......+||+.|||||++.+..|+.++||||+||++|||+||++||.+.+. .+... .+..
T Consensus 179 ~--~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-----~~~~~-----------~i~~ 240 (304)
T 3ubd_A 179 H--EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR-----KETMT-----------MILK 240 (304)
T ss_dssp ----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHH-----------HHHH
T ss_pred C--CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH-----HHHHH-----------HHHc
Confidence 2 2234567899999999999999999999999999999999999999975321 11111 1111
Q ss_pred ccCCCCCHHHHHHHHHHHHhhcccCCCCCCC-----HHHHHH
Q 012213 418 QRLSNTPLSEAMQVFFVAMLCVQEHGVERPT-----MREVVQ 454 (468)
Q Consensus 418 ~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt-----~~ev~~ 454 (468)
.. ...+.....++.+++.+|++.||++||| ++|+++
T Consensus 241 ~~-~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 241 AK-LGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp CC-CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred CC-CCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 11 1122334566788999999999999998 467664
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=5.4e-52 Score=394.58 Aligned_cols=257 Identities=21% Similarity=0.334 Sum_probs=190.4
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCe-----
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKET----- 254 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----- 254 (468)
.++|+..+.||+|+||+||+|.++ +|+.||||++.... .....+.+.+|+.++++++|||||++++++.+.+.
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~ 82 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQ 82 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccc
Confidence 456788899999999999999974 68999999986432 22233578899999999999999999999865443
Q ss_pred -------eEEEEeccCCCChhhhcccCCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEE
Q 012213 255 -------NLLVYEYMPNGSLGEVLHGKRG-SFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHV 326 (468)
Q Consensus 255 -------~~lv~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 326 (468)
.++||||+++|+|.+++..... ...++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||
T Consensus 83 ~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl 159 (299)
T 4g31_A 83 PSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKV 159 (299)
T ss_dssp ----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEE
T ss_pred ccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEE
Confidence 6899999999999999975432 24667888999999999999999887 999999999999999999999
Q ss_pred eeccccccccccCCC----------ccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcC
Q 012213 327 ADFGLAKYLQDTGAS----------ECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLD 396 (468)
Q Consensus 327 ~Dfgla~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~ 396 (468)
+|||+|+.+...... ......+||+.|||||++.+..|+.++|||||||++|||++ ||.... ..
T Consensus 160 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~---~~ 233 (299)
T 4g31_A 160 GDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM---ER 233 (299)
T ss_dssp CCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH---HH
T ss_pred ccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc---HH
Confidence 999999887533221 12234679999999999999999999999999999999996 775311 00
Q ss_pred HHHHHHHhhcccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH--HHHhc
Q 012213 397 IVQWTKMQTNSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ--MLAQA 459 (468)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~--~L~~~ 459 (468)
.. .+..+.+...............+++.+|++.||++|||+.|+++ .++++
T Consensus 234 ~~------------~~~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 286 (299)
T 4g31_A 234 VR------------TLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDL 286 (299)
T ss_dssp HH------------HHHHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC
T ss_pred HH------------HHHHHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCC
Confidence 00 01111111111111233345678999999999999999999987 45444
No 16
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=6.3e-48 Score=372.82 Aligned_cols=275 Identities=36% Similarity=0.576 Sum_probs=232.3
Q ss_pred hhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEe
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYE 260 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 260 (468)
.++|+..+.||+|+||+||+|.+++++.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 38 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 115 (321)
T 2qkw_B 38 TNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES--SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYK 115 (321)
T ss_dssp CCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC--SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEE
T ss_pred HhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEE
Confidence 67899999999999999999999889999999876432 2334678999999999999999999999999999999999
Q ss_pred ccCCCChhhhcccCCC--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 261 YMPNGSLGEVLHGKRG--SFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 261 ~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
|+++|+|.+++..... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 116 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 192 (321)
T 2qkw_B 116 YMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTEL 192 (321)
T ss_dssp CCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCTTCEECSSS
T ss_pred cCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 9999999999975432 35899999999999999999999887 999999999999999999999999999875433
Q ss_pred CCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCC-CCCCcCHHHHHHHhhcccccchhhhcc
Q 012213 339 GASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDF-GEEGLDIVQWTKMQTNSSKEGVVKILD 417 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d 417 (468)
..........||+.|+|||++.+..++.++||||||+++|||+||+.||... ..+......|........ .+...++
T Consensus 193 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 270 (321)
T 2qkw_B 193 DQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNG--QLEQIVD 270 (321)
T ss_dssp SCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTT--CCCSSSS
T ss_pred cccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccc--cHHHhcC
Confidence 3333334556899999999998889999999999999999999999999763 334456667765544333 4455555
Q ss_pred ccC-CCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCC
Q 012213 418 QRL-SNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKP 462 (468)
Q Consensus 418 ~~~-~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~ 462 (468)
... ..........+.+++.+|++.||++|||+.||++.|+.+...
T Consensus 271 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 271 PNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp SSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred hhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 555 345677888999999999999999999999999999987543
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.6e-48 Score=384.65 Aligned_cols=272 Identities=22% Similarity=0.299 Sum_probs=203.3
Q ss_pred hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEec------CC
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSN------KE 253 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~ 253 (468)
.++|+..+.||+|+||+||+|.+ .+|+.||||++..........+.+.+|+.+|+.++|||||++++++.. .+
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 45688899999999999999997 468999999997554433444678899999999999999999998754 35
Q ss_pred eeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q 012213 254 TNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAK 333 (468)
Q Consensus 254 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~ 333 (468)
..+||||||+ |+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+|+
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~--~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGla~ 206 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMAR 206 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSS--SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred EEEEEEeCCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeecceee
Confidence 7899999995 7899999643 46999999999999999999999888 9999999999999999999999999998
Q ss_pred cccccC--CCccccccccCccccCccccCCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhccccc
Q 012213 334 YLQDTG--ASECMSAVAGSYGYIAPEYAYTL-KVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKE 410 (468)
Q Consensus 334 ~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 410 (468)
.+.... ........+||+.|+|||++.+. .++.++||||+||++|||++|++||.+.+... .+............+
T Consensus 207 ~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~-~l~~I~~~~g~p~~~ 285 (398)
T 4b99_A 207 GLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH-QLQLIMMVLGTPSPA 285 (398)
T ss_dssp CC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH-HHHHHHHHHCCCCGG
T ss_pred ecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHH-HHHHHHHhcCCCChH
Confidence 764321 22334567899999999998765 56999999999999999999999997633110 000000000000000
Q ss_pred --------chhhhccccC--CCCCH-----HHHHHHHHHHHhhcccCCCCCCCHHHHHH--HHHhc
Q 012213 411 --------GVVKILDQRL--SNTPL-----SEAMQVFFVAMLCVQEHGVERPTMREVVQ--MLAQA 459 (468)
Q Consensus 411 --------~~~~~~d~~~--~~~~~-----~~~~~~~~l~~~c~~~~P~~RPt~~ev~~--~L~~~ 459 (468)
.....+.... ...+. .....+.+++.+|+..||++|||+.|+++ .+++.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~ 351 (398)
T 4b99_A 286 VIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKY 351 (398)
T ss_dssp GTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTT
T ss_pred HhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcCHhhCcC
Confidence 0000000000 01111 12346788999999999999999999987 44443
No 18
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.5e-47 Score=370.98 Aligned_cols=281 Identities=40% Similarity=0.677 Sum_probs=232.8
Q ss_pred hhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEe
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYE 260 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 260 (468)
.++|+..+.||+|+||.||+|.+.+|+.||||++....... ....+.+|+++++.++||||+++++++...+..++|||
T Consensus 29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 107 (326)
T 3uim_A 29 SDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQG-GELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYP 107 (326)
T ss_dssp TTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEE
T ss_pred hhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCch-HHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEE
Confidence 67899999999999999999998889999999987543322 22468999999999999999999999999999999999
Q ss_pred ccCCCChhhhcccCCC--CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 261 YMPNGSLGEVLHGKRG--SFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 261 ~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
|+++|+|.+++..... ..+++..+..++.|++.||+|||+...++|+||||||+||+++.++.+||+|||+++.....
T Consensus 108 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 187 (326)
T 3uim_A 108 YMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 187 (326)
T ss_dssp CCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSS
T ss_pred eccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCcc
Confidence 9999999999975432 35999999999999999999999882224999999999999999999999999999876532
Q ss_pred CCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCC---CCCCCcCHHHHHHHhhcccccchhhh
Q 012213 339 GASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGD---FGEEGLDIVQWTKMQTNSSKEGVVKI 415 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (468)
.........||+.|+|||++.+..++.++||||||+++|||+||+.||.. .........+|........ .....
T Consensus 188 -~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 264 (326)
T 3uim_A 188 -DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK--KLEAL 264 (326)
T ss_dssp -SSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSC--CSTTS
T ss_pred -cccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhch--hhhhh
Confidence 23334456699999999999888899999999999999999999999963 2334455666665544443 45555
Q ss_pred ccccC-CCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCCCCc
Q 012213 416 LDQRL-SNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKPNTF 465 (468)
Q Consensus 416 ~d~~~-~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~~~~ 465 (468)
.+..+ ......+...+.+++..|++.||++|||+.||++.|++....+.+
T Consensus 265 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~~~~~ 315 (326)
T 3uim_A 265 VDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERW 315 (326)
T ss_dssp SCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSCSSSC
T ss_pred cChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcchhhhh
Confidence 56555 455678889999999999999999999999999999987655543
No 19
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=5e-48 Score=377.07 Aligned_cols=200 Identities=28% Similarity=0.413 Sum_probs=170.0
Q ss_pred hhhhccCCcceEcccCCcceEEEEcC----CCcEEEEEEecccCCCCCchhHHHHHHHHHhCC-CCCCccceeEEEecCC
Q 012213 179 DILECVKDNNVIGRGGAGVVYRGVTP----NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKE 253 (468)
Q Consensus 179 ~~~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 253 (468)
++.+.|+..+.||+|+||+||+|.++ .++.||||++... ....++.+|++++..+ +||||+++++++.+.+
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~----~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~ 93 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT----SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKND 93 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT----SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc----cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECC
Confidence 44677999999999999999999863 4678999998543 2235688999999988 6999999999999999
Q ss_pred eeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC-CceEEeecccc
Q 012213 254 TNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD-FEAHVADFGLA 332 (468)
Q Consensus 254 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfgla 332 (468)
..++||||+++|+|.+++. .+++.++..++.||+.||+|||+.+ |+||||||+|||++.+ +.+||+|||+|
T Consensus 94 ~~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFGla 165 (361)
T 4f9c_A 94 HVVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLA 165 (361)
T ss_dssp EEEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred EEEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCCCC
Confidence 9999999999999999984 3889999999999999999999888 9999999999999887 79999999999
Q ss_pred ccccccCC--------------------------CccccccccCccccCccccCCC-CCCcchhhHHHHHHHHHHHhCCC
Q 012213 333 KYLQDTGA--------------------------SECMSAVAGSYGYIAPEYAYTL-KVDEKSDVYSFGVVLLELITGRR 385 (468)
Q Consensus 333 ~~~~~~~~--------------------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~elltg~~ 385 (468)
+....... .......+||+.|+|||++.+. .++.++||||+||++|||+||+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~ 245 (361)
T 4f9c_A 166 QGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRY 245 (361)
T ss_dssp EECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCS
T ss_pred cccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCC
Confidence 86542211 1112345799999999998765 58999999999999999999999
Q ss_pred CCCCC
Q 012213 386 PVGDF 390 (468)
Q Consensus 386 p~~~~ 390 (468)
||...
T Consensus 246 Pf~~~ 250 (361)
T 4f9c_A 246 PFYKA 250 (361)
T ss_dssp SSSCC
T ss_pred CCCCC
Confidence 99653
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2e-47 Score=394.72 Aligned_cols=254 Identities=22% Similarity=0.338 Sum_probs=206.5
Q ss_pred chhhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeE
Q 012213 178 DDILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNL 256 (468)
Q Consensus 178 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 256 (468)
+.+.++|+..+.||+|+||.||+|.++ +|+.||+|++.... ....+.+.+|+.+|+.++|||||++++++.+....+
T Consensus 153 ~~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~--~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~ 230 (573)
T 3uto_A 153 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMV 230 (573)
T ss_dssp SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEE
T ss_pred CcCccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc--hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEE
Confidence 445678999999999999999999984 68999999986432 222356889999999999999999999999999999
Q ss_pred EEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC--CceEEeecccccc
Q 012213 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD--FEAHVADFGLAKY 334 (468)
Q Consensus 257 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~--~~~kl~Dfgla~~ 334 (468)
+|||||++|+|.+++... ...+++.++..++.||+.||+|||+.+ |+||||||+|||++.+ +.+||+|||+|+.
T Consensus 231 iv~E~~~gg~L~~~i~~~-~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~ 306 (573)
T 3uto_A 231 MIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAH 306 (573)
T ss_dssp EEEECCCCCBHHHHHTCT-TSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEE
T ss_pred EEEeecCCCcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeE
Confidence 999999999999998643 345899999999999999999999888 9999999999999864 8999999999997
Q ss_pred ccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhh
Q 012213 335 LQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVK 414 (468)
Q Consensus 335 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (468)
+.. .......+||+.|||||++.+..|+.++||||+||++|||++|++||.+.... +.........
T Consensus 307 ~~~---~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~-----~~~~~i~~~~------ 372 (573)
T 3uto_A 307 LDP---KQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD-----ETLRNVKSCD------ 372 (573)
T ss_dssp CCT---TSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-----HHHHHHHTTC------
T ss_pred ccC---CCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-----HHHHHHHhCC------
Confidence 753 22345568999999999999999999999999999999999999999763311 1111100000
Q ss_pred hccccCC-CCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 415 ILDQRLS-NTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 415 ~~d~~~~-~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
..+. .........+.+++.+|++.||++|||+.|+++
T Consensus 373 ---~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 373 ---WNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp ---CCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ---CCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0000 001122456778999999999999999999986
No 21
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=3.4e-47 Score=390.89 Aligned_cols=251 Identities=23% Similarity=0.263 Sum_probs=199.0
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCC-CCCchhHHH---HHHHHHhCCCCCCccceeEEEecCCee
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITK-GSSHDNGLS---AEIRTLGKIRHRNIVRLKAFCSNKETN 255 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~---~e~~~l~~l~h~niv~l~~~~~~~~~~ 255 (468)
.++|+..+.||+|+||+||+|+++ +|+.||||++..... .......+. .++.+++.++|||||++++++.+.+..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 567888999999999999999985 689999999864221 111112233 346777888999999999999999999
Q ss_pred EEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccc
Q 012213 256 LLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYL 335 (468)
Q Consensus 256 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 335 (468)
+|||||++||+|.++|... ..+++..+..++.||+.||+|||+.+ ||||||||+|||++.+|++||+|||+|+.+
T Consensus 268 ylVmEy~~GGdL~~~l~~~--~~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~~~ 342 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF 342 (689)
T ss_dssp EEEECCCCSCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceeeec
Confidence 9999999999999999643 45899999999999999999999877 999999999999999999999999999876
Q ss_pred cccCCCccccccccCccccCccccC-CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhh
Q 012213 336 QDTGASECMSAVAGSYGYIAPEYAY-TLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVK 414 (468)
Q Consensus 336 ~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (468)
... .....+||+.|||||++. +..|+.++||||+||++|||++|++||.+.... +.......
T Consensus 343 ~~~----~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~--~~~~i~~~----------- 405 (689)
T 3v5w_A 343 SKK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK--DKHEIDRM----------- 405 (689)
T ss_dssp SSC----CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCC--CHHHHHHH-----------
T ss_pred CCC----CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHh-----------
Confidence 532 234568999999999986 457999999999999999999999999753221 11111111
Q ss_pred hccccCCCCCHHHHHHHHHHHHhhcccCCCCCCC-----HHHHHH
Q 012213 415 ILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPT-----MREVVQ 454 (468)
Q Consensus 415 ~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt-----~~ev~~ 454 (468)
..... ...+......+.+++..|++.||++|++ ++||.+
T Consensus 406 i~~~~-~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 406 TLTMA-VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp HHHCC-CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred hcCCC-CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 11111 1122334566788999999999999998 677754
No 22
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.6e-45 Score=352.13 Aligned_cols=268 Identities=37% Similarity=0.604 Sum_probs=221.8
Q ss_pred cceEcccCCcceEEEEcCCCcEEEEEEecccCC--CCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEeccCC
Q 012213 187 NNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITK--GSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264 (468)
Q Consensus 187 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 264 (468)
++.||+|+||.||+|.+ +++.||||++..... .....+.+.+|+.+++.++||||+++++++.+.+..++||||+++
T Consensus 36 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 114 (307)
T 2nru_A 36 GNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPN 114 (307)
T ss_dssp CCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred CCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCC
Confidence 48999999999999987 688999999865432 223346789999999999999999999999999999999999999
Q ss_pred CChhhhcccCC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccCCCcc
Q 012213 265 GSLGEVLHGKR-GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASEC 343 (468)
Q Consensus 265 gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 343 (468)
|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...........
T Consensus 115 ~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 191 (307)
T 2nru_A 115 GSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVM 191 (307)
T ss_dssp CBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEE
T ss_pred CcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEcCCCcEEEeeccccccccccccccc
Confidence 99999986432 346899999999999999999999887 99999999999999999999999999987654333333
Q ss_pred ccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccccCCCC
Q 012213 344 MSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQRLSNT 423 (468)
Q Consensus 344 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 423 (468)
.....||+.|+|||.+.+ .++.++||||||+++|||++|+.||....... .+..+..... .....+...++..+...
T Consensus 192 ~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 268 (307)
T 2nru_A 192 TSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLLDIKEEIE-DEEKTIEDYIDKKMNDA 268 (307)
T ss_dssp CSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS-BTTHHHHHHH-TTSCCHHHHSCSSCSCC
T ss_pred ccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchH-HHHHHHHHhh-hhhhhhhhhcccccccc
Confidence 345678999999998765 58899999999999999999999998643222 2223332222 22234566777777777
Q ss_pred CHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccC
Q 012213 424 PLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQK 461 (468)
Q Consensus 424 ~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 461 (468)
+......+.+++..|++.+|++|||+.||++.|+++..
T Consensus 269 ~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 269 DSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp CHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred chHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 88888999999999999999999999999999998864
No 23
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.5e-46 Score=368.39 Aligned_cols=260 Identities=24% Similarity=0.396 Sum_probs=212.2
Q ss_pred hhccCCcceEcccCCcceEEEEcC--------CCcEEEEEEecccCCCCCchhHHHHHHHHHhCC-CCCCccceeEEEec
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP--------NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSN 251 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 251 (468)
.+.|+..+.||+|+||.||+|.+. ++..||||++.... .......+.+|+.+++.+ +||||+++++++.+
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC-BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc-CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 467888899999999999999852 35679999986432 122335689999999999 89999999999999
Q ss_pred CCeeEEEEeccCCCChhhhcccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEE
Q 012213 252 KETNLLVYEYMPNGSLGEVLHGKR--------------GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNIL 317 (468)
Q Consensus 252 ~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nil 317 (468)
.+..++||||+++|+|.+++.... ...+++..++.++.||+.||+|||+.+ |+||||||+|||
T Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIl 235 (370)
T 2psq_A 159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVL 235 (370)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEE
T ss_pred CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEE
Confidence 999999999999999999997543 235899999999999999999999887 999999999999
Q ss_pred EcCCCceEEeeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcC
Q 012213 318 LNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLD 396 (468)
Q Consensus 318 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~ 396 (468)
++.++.+||+|||+++.+.............+|+.|+|||++.+..++.++|||||||++|||+| |+.||.+.... .
T Consensus 236 l~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~--~ 313 (370)
T 2psq_A 236 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE--E 313 (370)
T ss_dssp ECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--G
T ss_pred ECCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH--H
Confidence 99999999999999987654333333445567889999999999999999999999999999999 99999764321 1
Q ss_pred HHHHHHHhhcccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213 397 IVQWTKMQTNSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ 460 (468)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 460 (468)
+.. .+........+......+.+++..||+.||++||++.|+++.|+++.
T Consensus 314 ~~~--------------~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il 363 (370)
T 2psq_A 314 LFK--------------LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363 (370)
T ss_dssp HHH--------------HHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHH--------------HHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 111 11111112233345567889999999999999999999999999864
No 24
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.4e-46 Score=363.41 Aligned_cols=268 Identities=25% Similarity=0.319 Sum_probs=208.4
Q ss_pred hhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCe----eE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKET----NL 256 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----~~ 256 (468)
.+.|+..+.||+|+||+||+|.+. ++.||||++.... .....+..|+.++++++||||+++++++..... .+
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 98 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD---KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLW 98 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc---hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEE
Confidence 467888999999999999999885 7899999985332 223456678999999999999999999987543 69
Q ss_pred EEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhc-------CCCCeeecCCCCCcEEEcCCCceEEeec
Q 012213 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHD-------CSPLIIHRDVKSNNILLNSDFEAHVADF 329 (468)
Q Consensus 257 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-------~~~~ivH~dlk~~Nill~~~~~~kl~Df 329 (468)
+||||+++|+|.+++... .+++..+..++.|++.||+|||+. .+++|+||||||+||+++.++.+||+||
T Consensus 99 lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DF 175 (322)
T 3soc_A 99 LITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADF 175 (322)
T ss_dssp EEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCC
T ss_pred EEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccC
Confidence 999999999999999753 389999999999999999999976 0113999999999999999999999999
Q ss_pred cccccccccCCCccccccccCccccCccccCCC-----CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCc-C-------
Q 012213 330 GLAKYLQDTGASECMSAVAGSYGYIAPEYAYTL-----KVDEKSDVYSFGVVLLELITGRRPVGDFGEEGL-D------- 396 (468)
Q Consensus 330 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~-~------- 396 (468)
|+++.+.............||+.|+|||++.+. .++.++|||||||++|||+||+.||........ .
T Consensus 176 g~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~ 255 (322)
T 3soc_A 176 GLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQ 255 (322)
T ss_dssp TTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCS
T ss_pred CcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhcc
Confidence 999877644333334456799999999998763 466789999999999999999999976332211 1
Q ss_pred ---HHHHHHHhhcccccchhhhccccCCC--CCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCC
Q 012213 397 ---IVQWTKMQTNSSKEGVVKILDQRLSN--TPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKP 462 (468)
Q Consensus 397 ---~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~ 462 (468)
..++........ ..+.+.. ........+.+++.+||+.||++|||+.||++.|++++..
T Consensus 256 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~ 319 (322)
T 3soc_A 256 HPSLEDMQEVVVHKK-------KRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL 319 (322)
T ss_dssp SCCHHHHHHHHTTSC-------CCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCchhhhhhhhhccc-------CCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 111111110000 0011110 1234567799999999999999999999999999988643
No 25
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=3e-46 Score=358.92 Aligned_cols=264 Identities=31% Similarity=0.429 Sum_probs=204.4
Q ss_pred hhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEe
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYE 260 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 260 (468)
.++|+..+.||+|+||+||+|.+ +|+.||||++..........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 114 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE 114 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEE
T ss_pred hhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEe
Confidence 56788889999999999999987 58899999987554433444678899999999999999999999999999999999
Q ss_pred ccCCCChhhhcccCCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccC
Q 012213 261 YMPNGSLGEVLHGKRG-SFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTG 339 (468)
Q Consensus 261 ~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 339 (468)
|+++|+|.+++..... ..+++..++.++.|++.||+|||+.+ ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 115 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~- 192 (309)
T 3p86_A 115 YLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST- 192 (309)
T ss_dssp CCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC---------
T ss_pred cCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCCcccccc-
Confidence 9999999999974332 24899999999999999999999653 23999999999999999999999999999865422
Q ss_pred CCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcccc
Q 012213 340 ASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQR 419 (468)
Q Consensus 340 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 419 (468)
........||+.|+|||++.+..++.++||||||+++|||+||+.||...... +....... ...
T Consensus 193 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~-----~~~~~~~~----------~~~ 256 (309)
T 3p86_A 193 -FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA-----QVVAAVGF----------KCK 256 (309)
T ss_dssp ----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH-----HHHHHHHH----------SCC
T ss_pred -ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHh----------cCC
Confidence 12234567899999999999999999999999999999999999999753311 11111000 011
Q ss_pred CCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCCC
Q 012213 420 LSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKPN 463 (468)
Q Consensus 420 ~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~~ 463 (468)
....+......+.+++..||+.||++|||+.|+++.|+.+....
T Consensus 257 ~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 257 RLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred CCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 11223344567889999999999999999999999999886554
No 26
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=6.5e-46 Score=356.84 Aligned_cols=260 Identities=26% Similarity=0.425 Sum_probs=209.0
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 259 (468)
.++|...+.||+|+||+||+|.+. +++.||+|++... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 86 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF--DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFIT 86 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEE
Confidence 456788899999999999999984 6889999988532 2233467899999999999999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccC
Q 012213 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTG 339 (468)
Q Consensus 260 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 339 (468)
||+++|+|.+++... ...+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 87 e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 162 (310)
T 3s95_A 87 EYIKGGTLRGIIKSM-DSQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK 162 (310)
T ss_dssp ECCTTCBHHHHHHHC-CTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred EecCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence 999999999999753 345899999999999999999999887 9999999999999999999999999998764322
Q ss_pred CCc------------cccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcc
Q 012213 340 ASE------------CMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNS 407 (468)
Q Consensus 340 ~~~------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 407 (468)
... ......||+.|+|||++.+..++.++||||||+++|||++|..|+............
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~-------- 234 (310)
T 3s95_A 163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGL-------- 234 (310)
T ss_dssp -----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSB--------
T ss_pred ccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhh--------
Confidence 111 112457999999999999999999999999999999999999998763322111000
Q ss_pred cccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213 408 SKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ 460 (468)
Q Consensus 408 ~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 460 (468)
......+... +......+.+++..|++.||++|||+.|+++.|+.++
T Consensus 235 ---~~~~~~~~~~---~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 235 ---NVRGFLDRYC---PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp ---CHHHHHHHTC---CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---hhhccccccC---CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1111111111 1122345778999999999999999999999999875
No 27
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.2e-46 Score=360.61 Aligned_cols=254 Identities=24% Similarity=0.366 Sum_probs=199.6
Q ss_pred cchhhhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCee
Q 012213 177 SDDILECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETN 255 (468)
Q Consensus 177 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 255 (468)
.+++.+.|+..+.||+|+||+||+|.+ .+|+.||||++....... ....+.+|+++++.++||||+++++++.+.+..
T Consensus 5 ~~~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~-~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~ 83 (347)
T 3zgw_A 5 YDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGS-DLPRIKTEIEALKNLRHQHICQLYHVLETANKI 83 (347)
T ss_dssp STTTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred HHHHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccch-HHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEE
Confidence 345678899999999999999999997 578999999986544322 235689999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccc
Q 012213 256 LLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYL 335 (468)
Q Consensus 256 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 335 (468)
++||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||++++++.+||+|||++...
T Consensus 84 ~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~ 158 (347)
T 3zgw_A 84 FMVLEYCPGGELFDYIISQ--DRLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKP 158 (347)
T ss_dssp EEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC-
T ss_pred EEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCccHHHEEEcCCCCEEEEeccCcccc
Confidence 9999999999999998643 34899999999999999999999887 999999999999999999999999999765
Q ss_pred cccCCCccccccccCccccCccccCCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhh
Q 012213 336 QDTGASECMSAVAGSYGYIAPEYAYTLKV-DEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVK 414 (468)
Q Consensus 336 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (468)
... .........||+.|+|||++.+..+ +.++|||||||++|||++|+.||.+.. ........
T Consensus 159 ~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~-----~~~~~~~i---------- 222 (347)
T 3zgw_A 159 KGN-KDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN-----VMALYKKI---------- 222 (347)
T ss_dssp --------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHH----------
T ss_pred cCC-CCccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHH----------
Confidence 422 2223345679999999999988775 899999999999999999999997532 11111111
Q ss_pred hccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 415 ILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 415 ~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
..... ..+......+.+++.+|++.||++|||++|+++
T Consensus 223 -~~~~~-~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 223 -MRGKY-DVPKWLSPSSILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp -HHTCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -HcCCC-CCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhc
Confidence 11111 112223456778999999999999999999987
No 28
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=5.9e-46 Score=349.46 Aligned_cols=259 Identities=24% Similarity=0.394 Sum_probs=211.8
Q ss_pred hhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEe
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYE 260 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 260 (468)
.+.|+..+.||+|+||.||+|.++++..||||++.... ...+.+.+|+.++.+++||||+++++++.+....++|||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS---MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTE 83 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT---BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC---CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEE
Confidence 46788889999999999999999888899999986432 233678999999999999999999999999999999999
Q ss_pred ccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccCC
Q 012213 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGA 340 (468)
Q Consensus 261 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 340 (468)
|+++++|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...... .
T Consensus 84 ~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~-~ 158 (268)
T 3sxs_A 84 YISNGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD-Q 158 (268)
T ss_dssp CCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTT-C
T ss_pred ccCCCcHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchh-h
Confidence 99999999999643 335899999999999999999999887 999999999999999999999999999876532 2
Q ss_pred CccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcccc
Q 012213 341 SECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQR 419 (468)
Q Consensus 341 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 419 (468)
........+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...... .... ......
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~-----------~~~~~~ 222 (268)
T 3sxs_A 159 YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS-----EVVL-----------KVSQGH 222 (268)
T ss_dssp EEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHHH-----------HHHTTC
T ss_pred hhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH-----HHHH-----------HHHcCC
Confidence 222234456778999999998889999999999999999999 99999753311 1111 111111
Q ss_pred CCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCCC
Q 012213 420 LSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKPN 463 (468)
Q Consensus 420 ~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~~ 463 (468)
....+......+.+++..|++.+|++|||+.|+++.|+.++..+
T Consensus 223 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 223 RLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp CCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred CCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 11112223456888999999999999999999999999998765
No 29
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=6.1e-46 Score=349.60 Aligned_cols=257 Identities=24% Similarity=0.423 Sum_probs=211.3
Q ss_pred hhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEe
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYE 260 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 260 (468)
.+.|+..+.||+|+||+||+|.+.+++.||+|++.... ...+.+.+|++++++++||||+++++++.+....++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA---MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFE 85 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS---BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc---cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEE
Confidence 45678889999999999999999889999999986432 223679999999999999999999999999999999999
Q ss_pred ccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccCC
Q 012213 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGA 340 (468)
Q Consensus 261 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 340 (468)
|+++++|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...... .
T Consensus 86 ~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~-~ 160 (269)
T 4hcu_A 86 FMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-Q 160 (269)
T ss_dssp CCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH-H
T ss_pred eCCCCcHHHHHHhc-CcccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEecccccccccccc-c
Confidence 99999999999743 345899999999999999999999887 999999999999999999999999999866422 1
Q ss_pred CccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcccc
Q 012213 341 SECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQR 419 (468)
Q Consensus 341 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 419 (468)
........+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... +... .+....
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~-----~~~~-----------~~~~~~ 224 (269)
T 4hcu_A 161 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS-----EVVE-----------DISTGF 224 (269)
T ss_dssp HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHHH-----------HHHTTC
T ss_pred cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH-----HHHH-----------HHhcCc
Confidence 112234456788999999998899999999999999999999 99999753311 1111 111111
Q ss_pred CCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccC
Q 012213 420 LSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQK 461 (468)
Q Consensus 420 ~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 461 (468)
....+......+.+++..|++.+|++|||+.|+++.|+++..
T Consensus 225 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 225 RLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 111222335668889999999999999999999999998764
No 30
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=4.4e-46 Score=376.70 Aligned_cols=262 Identities=26% Similarity=0.401 Sum_probs=214.1
Q ss_pred hhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEe
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYE 260 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 260 (468)
.+.|+..+.||+|+||+||+|.++++..||||+++... ...+.+.+|+.++++++||||+++++++. .+..++|||
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e 262 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE 262 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS---BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC---ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence 56788889999999999999999888999999986432 23477999999999999999999999986 567899999
Q ss_pred ccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccCC
Q 012213 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGA 340 (468)
Q Consensus 261 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 340 (468)
|+++|+|.+++.......+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 263 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~-~ 338 (454)
T 1qcf_A 263 FMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDN-E 338 (454)
T ss_dssp CCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCH-H
T ss_pred ecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCC-c
Confidence 999999999997554446889999999999999999999887 999999999999999999999999999876421 1
Q ss_pred CccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcccc
Q 012213 341 SECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQR 419 (468)
Q Consensus 341 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 419 (468)
........++..|+|||++....++.++||||||+++|||+| |+.||.+.... +... .+....
T Consensus 339 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~-----~~~~-----------~i~~~~ 402 (454)
T 1qcf_A 339 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP-----EVIR-----------ALERGY 402 (454)
T ss_dssp HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH-----HHHH-----------HHHHTC
T ss_pred eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHH-----------HHHcCC
Confidence 111233456789999999998899999999999999999999 99999763311 1111 111111
Q ss_pred CCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCCCCcc
Q 012213 420 LSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKPNTFQ 466 (468)
Q Consensus 420 ~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~~~~~ 466 (468)
....+......+.+++..||+.||++|||+++|++.|+++......+
T Consensus 403 ~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~~~~ 449 (454)
T 1qcf_A 403 RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQ 449 (454)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSSCCS
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhccccc
Confidence 11223345567889999999999999999999999999997655443
No 31
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=2.2e-45 Score=351.02 Aligned_cols=251 Identities=24% Similarity=0.335 Sum_probs=206.8
Q ss_pred hhhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213 180 ILECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 180 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
..+.|+..+.||+|+||+||+|.+ .+++.||||++...... ..+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 95 (297)
T 3fxz_A 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (297)
T ss_dssp GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS--CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc--HHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEE
Confidence 467789999999999999999997 56899999998654332 236689999999999999999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
|||+++|+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 96 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 169 (297)
T 3fxz_A 96 MEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (297)
T ss_dssp EECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EECCCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCCc
Confidence 9999999999999754 4899999999999999999999887 999999999999999999999999999876532
Q ss_pred CCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccc
Q 012213 339 GASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQ 418 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 418 (468)
. .......||+.|+|||++.+..++.++||||||+++|||+||+.||...... ........... .
T Consensus 170 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~----~~~~~~~~~~~---------~ 234 (297)
T 3fxz_A 170 Q--SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL----RALYLIATNGT---------P 234 (297)
T ss_dssp T--CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHHHHHHHCS---------C
T ss_pred c--cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHHHhCCC---------C
Confidence 2 2234567999999999999999999999999999999999999999753211 01111000000 0
Q ss_pred cCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 419 RLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 419 ~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
....+......+.+++..|++.||++|||+.|+++
T Consensus 235 -~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 235 -ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp -CCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -CCCCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 01122334566788999999999999999999987
No 32
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=9.6e-46 Score=357.99 Aligned_cols=249 Identities=23% Similarity=0.339 Sum_probs=207.0
Q ss_pred hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 259 (468)
..+|+..+.||+|+||.||+|.+ .+|+.||||++..........+.+.+|+.+++.++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 56788899999999999999997 57899999999765444444567889999999999999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccC
Q 012213 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTG 339 (468)
Q Consensus 260 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 339 (468)
||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 94 e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~- 167 (328)
T 3fe3_A 94 EYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVG- 167 (328)
T ss_dssp CCCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS-
T ss_pred ECCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceecCCC-
Confidence 999999999998643 34899999999999999999999887 999999999999999999999999999866422
Q ss_pred CCccccccccCccccCccccCCCCCC-cchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccc
Q 012213 340 ASECMSAVAGSYGYIAPEYAYTLKVD-EKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQ 418 (468)
Q Consensus 340 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 418 (468)
.......||+.|+|||++.+..+. .++|||||||++|||++|+.||.+.+ ..+...... ..
T Consensus 168 --~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~i~-----------~~ 229 (328)
T 3fe3_A 168 --GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN-----LKELRERVL-----------RG 229 (328)
T ss_dssp --CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHH-----------HC
T ss_pred --CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC-----HHHHHHHHH-----------hC
Confidence 234566799999999999887765 79999999999999999999997532 111111111 11
Q ss_pred cCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 419 RLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 419 ~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
. ...+......+.+++.+|++.||.+|||++|+++
T Consensus 230 ~-~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 230 K-YRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp C-CCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred C-CCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1 1122234456778999999999999999999986
No 33
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2.7e-45 Score=351.93 Aligned_cols=264 Identities=30% Similarity=0.393 Sum_probs=205.5
Q ss_pred hhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEe
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYE 260 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 260 (468)
.+.|...+.||+|+||+||+|.+.. .+|+|.++.........+.+.+|+.++++++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 4578888999999999999998753 5899988765444444567899999999999999999999875 456899999
Q ss_pred ccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccCC
Q 012213 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGA 340 (468)
Q Consensus 261 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 340 (468)
|+++|+|.+++... ...+++.++..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 112 ~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~ 187 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp CCSSCBHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCSSSEEECTTSCEEECCCCSSCC------
T ss_pred cCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCChhhEEEcCCCCEEEccCCCceecccccc
Confidence 99999999999743 346899999999999999999999887 99999999999999999999999999986653333
Q ss_pred CccccccccCccccCccccC---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcc
Q 012213 341 SECMSAVAGSYGYIAPEYAY---TLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILD 417 (468)
Q Consensus 341 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 417 (468)
........||+.|+|||++. +..++.++||||||+++|||+||+.||....... ....... .....
T Consensus 188 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~----~~~~~~~-------~~~~~ 256 (307)
T 3lb7_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD----QIIFMVG-------RGYAS 256 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH----HHHHHHH-------HTCCC
T ss_pred cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH----HHHHHHh-------cCCCC
Confidence 33345567999999999885 6678899999999999999999999997643211 1111100 01111
Q ss_pred ccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCC
Q 012213 418 QRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKP 462 (468)
Q Consensus 418 ~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~ 462 (468)
+.+..........+.+++..|++.+|++||++.||++.|+.+...
T Consensus 257 ~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~ 301 (307)
T 3lb7_A 257 PDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp CCSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTT
T ss_pred cchhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhh
Confidence 122222233456788899999999999999999999999988654
No 34
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.3e-46 Score=369.81 Aligned_cols=260 Identities=26% Similarity=0.368 Sum_probs=208.8
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 259 (468)
.+.|...+.||+|+||.||+|.+. +++.||||.+.... .......+.+|+.++++++||||+++++++...+..++||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 191 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETL-PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVM 191 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTS-CHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccC-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEE
Confidence 456788899999999999999985 78999999986432 1222346889999999999999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccC
Q 012213 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTG 339 (468)
Q Consensus 260 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 339 (468)
||+++|+|.+++... +..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 192 e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~ 267 (377)
T 3cbl_A 192 ELVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGV 267 (377)
T ss_dssp ECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECTTSE
T ss_pred EcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceecCCCc
Confidence 999999999999742 345899999999999999999999887 9999999999999999999999999998643211
Q ss_pred CCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccc
Q 012213 340 ASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQ 418 (468)
Q Consensus 340 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 418 (468)
.........+++.|+|||.+.+..++.++||||||+++|||+| |..||...... ....+. ...
T Consensus 268 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~--~~~~~~--------------~~~ 331 (377)
T 3cbl_A 268 YAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--QTREFV--------------EKG 331 (377)
T ss_dssp EECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--HHHHHH--------------HTT
T ss_pred eeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHH--------------HcC
Confidence 1111122335778999999998889999999999999999999 99999763311 011110 001
Q ss_pred cCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccC
Q 012213 419 RLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQK 461 (468)
Q Consensus 419 ~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 461 (468)
.....+......+.+++..||+.||++|||++++++.|+++..
T Consensus 332 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 332 GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 1112233345678889999999999999999999999998754
No 35
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.2e-45 Score=357.25 Aligned_cols=260 Identities=24% Similarity=0.392 Sum_probs=208.5
Q ss_pred hhccCCcceEcccCCcceEEEEcC----CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP----NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNL 256 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 256 (468)
.+.|+..+.||+|+||+||+|.+. .+..||||++.... .....+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 126 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY-TERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAM 126 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccE
Confidence 567888899999999999999984 34569999986432 2223357899999999999999999999999999999
Q ss_pred EEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccc
Q 012213 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQ 336 (468)
Q Consensus 257 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~ 336 (468)
+||||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.+.
T Consensus 127 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 202 (325)
T 3kul_A 127 IVTEYMENGSLDTFLRTH-DGQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLE 202 (325)
T ss_dssp EEEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EEeeCCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence 999999999999999643 345899999999999999999999887 9999999999999999999999999998765
Q ss_pred ccCC-CccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhh
Q 012213 337 DTGA-SECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVK 414 (468)
Q Consensus 337 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (468)
.... ........+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... +.. ..
T Consensus 203 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-----~~~-----------~~ 266 (325)
T 3kul_A 203 DDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR-----DVI-----------SS 266 (325)
T ss_dssp ----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH-----HHH-----------HH
T ss_pred cCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH-----HHH-----------HH
Confidence 3222 112233456788999999998899999999999999999999 99999653311 111 11
Q ss_pred hccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccC
Q 012213 415 ILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQK 461 (468)
Q Consensus 415 ~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 461 (468)
+........+......+.+++..||+.||++|||+.||++.|+.+..
T Consensus 267 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~ 313 (325)
T 3kul_A 267 VEEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIR 313 (325)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 11111122233455678899999999999999999999999998743
No 36
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.5e-45 Score=363.09 Aligned_cols=259 Identities=26% Similarity=0.403 Sum_probs=198.6
Q ss_pred hhccCCcceEcccCCcceEEEEcC----CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP----NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNL 256 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 256 (468)
.++|+..+.||+|+||.||+|.+. ++..||||++.... .......+.+|+.++++++||||+++++++.+.+..+
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 122 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceE
Confidence 567889999999999999999875 57789999986432 2223457899999999999999999999999999999
Q ss_pred EEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccc
Q 012213 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQ 336 (468)
Q Consensus 257 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~ 336 (468)
+||||+++|+|.++++.. ...+++.+++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 123 lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 198 (373)
T 2qol_A 123 IVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLE 198 (373)
T ss_dssp EEEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EEEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCccccccc
Confidence 999999999999999743 346899999999999999999999887 9999999999999999999999999998765
Q ss_pred ccCCC-ccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhh
Q 012213 337 DTGAS-ECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVK 414 (468)
Q Consensus 337 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (468)
..... .......+++.|+|||++.+..++.++||||||+++|||++ |+.||..... .+....
T Consensus 199 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~-----~~~~~~----------- 262 (373)
T 2qol_A 199 DDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-----QDVIKA----------- 262 (373)
T ss_dssp ---------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH-----HHHHHH-----------
T ss_pred cCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHH-----------
Confidence 32211 11222345778999999999999999999999999999998 9999975331 111111
Q ss_pred hccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213 415 ILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ 460 (468)
Q Consensus 415 ~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 460 (468)
+........+......+.+++..||+.||++||++.||+++|+++.
T Consensus 263 i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~ 308 (373)
T 2qol_A 263 VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308 (373)
T ss_dssp HHTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHcCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHH
Confidence 1111112223345567889999999999999999999999998874
No 37
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=1.2e-45 Score=373.01 Aligned_cols=263 Identities=29% Similarity=0.414 Sum_probs=209.8
Q ss_pred hhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEe
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYE 260 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 260 (468)
.+.|+..+.||+|+||.||+|.+.++..||||+++... ...+.|.+|+.++++++||||+++++++.+ +..++|||
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e 258 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 258 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC---CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence 46678889999999999999999888899999986433 223679999999999999999999999876 67899999
Q ss_pred ccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccCC
Q 012213 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGA 340 (468)
Q Consensus 261 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 340 (468)
|+++|+|.+++....+..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..... .
T Consensus 259 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-~ 334 (452)
T 1fmk_A 259 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDN-E 334 (452)
T ss_dssp CCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred hhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceecCCC-c
Confidence 999999999997554556899999999999999999999887 999999999999999999999999999876532 1
Q ss_pred CccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcccc
Q 012213 341 SECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQR 419 (468)
Q Consensus 341 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 419 (468)
........++..|+|||.+....++.++||||||+++|||+| |+.||.+.... +... .+....
T Consensus 335 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~-----~~~~-----------~i~~~~ 398 (452)
T 1fmk_A 335 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLD-----------QVERGY 398 (452)
T ss_dssp --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHH-----------HHHTTC
T ss_pred eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH-----HHHH-----------HHHcCC
Confidence 222234456789999999998899999999999999999999 99999753311 1111 111111
Q ss_pred CCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCCCCccC
Q 012213 420 LSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKPNTFQM 467 (468)
Q Consensus 420 ~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~~~~~~ 467 (468)
....+......+.+++..||+.||++|||++++++.|+++......+.
T Consensus 399 ~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~~~ 446 (452)
T 1fmk_A 399 RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQY 446 (452)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCCC
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCccc
Confidence 122233455678899999999999999999999999999876655444
No 38
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-45 Score=358.34 Aligned_cols=263 Identities=24% Similarity=0.394 Sum_probs=212.6
Q ss_pred hhccCCcceEcccCCcceEEEEcC------CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCe
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP------NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKET 254 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 254 (468)
.++|+..+.||+|+||.||+|.+. +++.||||.+.... .......+.+|+.++++++||||+++++++.+.+.
T Consensus 46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 124 (343)
T 1luf_A 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP 124 (343)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence 567888999999999999999974 34789999986432 22234578999999999999999999999999999
Q ss_pred eEEEEeccCCCChhhhcccCC----------------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCC
Q 012213 255 NLLVYEYMPNGSLGEVLHGKR----------------------GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVK 312 (468)
Q Consensus 255 ~~lv~e~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk 312 (468)
.++||||+++|+|.+++.... ...+++.+++.++.||+.||.|||+.+ |+|||||
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlk 201 (343)
T 1luf_A 125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLA 201 (343)
T ss_dssp CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCS
T ss_pred eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCC
Confidence 999999999999999997532 146899999999999999999999887 9999999
Q ss_pred CCcEEEcCCCceEEeeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCC
Q 012213 313 SNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFG 391 (468)
Q Consensus 313 ~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~ 391 (468)
|+||+++.++.+||+|||+++...............+|+.|+|||.+.+..++.++||||||+++|||+| |+.||....
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 281 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 281 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC
Confidence 9999999999999999999987653333333345668899999999998899999999999999999999 999997532
Q ss_pred CCCcCHHHHHHHhhcccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCCC
Q 012213 392 EEGLDIVQWTKMQTNSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKPN 463 (468)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~~ 463 (468)
. .+.. ..+.+......+......+.+++..||+.||++||++.|+++.|+++....
T Consensus 282 ~-----~~~~-----------~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 282 H-----EEVI-----------YYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp H-----HHHH-----------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred h-----HHHH-----------HHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 1 1111 111112222233344567889999999999999999999999999986543
No 39
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=3.8e-45 Score=353.46 Aligned_cols=255 Identities=22% Similarity=0.301 Sum_probs=205.9
Q ss_pred hhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213 180 ILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 180 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
+.++|+..+.||+|+||+||+|.+. +++.||||++..... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 83 (323)
T 3tki_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (323)
T ss_dssp TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc-cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 4678899999999999999999975 789999999854322 22235688999999999999999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++..+...
T Consensus 84 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 158 (323)
T 3tki_A 84 LEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (323)
T ss_dssp EECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred EEcCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceeccC
Confidence 9999999999999643 35899999999999999999999887 999999999999999999999999999876544
Q ss_pred CCCccccccccCccccCccccCCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcc
Q 012213 339 GASECMSAVAGSYGYIAPEYAYTLKV-DEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILD 417 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 417 (468)
..........||+.|+|||++.+..+ +.++||||||+++|||++|+.||............|... ..
T Consensus 159 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~---~~--------- 226 (323)
T 3tki_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK---KT--------- 226 (323)
T ss_dssp TEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTT---CT---------
T ss_pred CcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcc---cc---------
Confidence 33333456789999999999987765 779999999999999999999997644332222222111 00
Q ss_pred ccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 418 QRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 418 ~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
...........+.+++.+|++.||++|||+.|+++
T Consensus 227 --~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 227 --YLNPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp --TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --cCCccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 00111223456678999999999999999999986
No 40
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=3.2e-45 Score=354.04 Aligned_cols=261 Identities=21% Similarity=0.299 Sum_probs=195.6
Q ss_pred hhccCCcceEcccCCcceEEEEcCCCc----EEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCee-
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPNGE----QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETN- 255 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~- 255 (468)
.++|+..+.||+|+||+||+|.+.... .||||++..........+.+.+|+.++++++||||+++++++......
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 567888999999999999999986433 799999875544444557799999999999999999999999877665
Q ss_pred -----EEEEeccCCCChhhhcccCC----CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEE
Q 012213 256 -----LLVYEYMPNGSLGEVLHGKR----GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHV 326 (468)
Q Consensus 256 -----~lv~e~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 326 (468)
++||||+++|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~~~~kl 178 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCV 178 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCCCCEEE
Confidence 99999999999999985432 225899999999999999999999887 999999999999999999999
Q ss_pred eeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhh
Q 012213 327 ADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQT 405 (468)
Q Consensus 327 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 405 (468)
+|||+++...............+++.|+|||.+.+..++.++||||||+++|||++ |+.||.......
T Consensus 179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~----------- 247 (323)
T 3qup_A 179 ADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE----------- 247 (323)
T ss_dssp CCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG-----------
T ss_pred eeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH-----------
Confidence 99999987654333333344557889999999999999999999999999999999 999997643211
Q ss_pred cccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213 406 NSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ 460 (468)
Q Consensus 406 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 460 (468)
....+........+......+.+++..|++.||++|||+.|+++.|+++.
T Consensus 248 -----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l 297 (323)
T 3qup_A 248 -----IYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL 297 (323)
T ss_dssp -----HHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -----HHHHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 11111112222223344567889999999999999999999999999874
No 41
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=3.9e-45 Score=373.30 Aligned_cols=259 Identities=25% Similarity=0.367 Sum_probs=214.7
Q ss_pred hhccCCcceEcccCCcceEEEEcCC-CcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPN-GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 259 (468)
.+.|+..+.||+|+||.||+|.+.. +..||||.+.... ...+.|.+|+.++++++||||++++++|......++||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~ 295 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 295 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc---cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEE
Confidence 4567888999999999999999864 7899999986432 23467999999999999999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccC
Q 012213 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTG 339 (468)
Q Consensus 260 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 339 (468)
||+++|+|.+++.......+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 296 E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~- 371 (495)
T 1opk_A 296 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGD- 371 (495)
T ss_dssp ECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECCTTC-
T ss_pred EccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceeccCC-
Confidence 9999999999998666667999999999999999999999887 999999999999999999999999999876422
Q ss_pred CCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccc
Q 012213 340 ASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQ 418 (468)
Q Consensus 340 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 418 (468)
.........++..|+|||.+....++.++||||||+++|||+| |+.||...... .+... +..
T Consensus 372 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~~~~~---------------~~~ 434 (495)
T 1opk_A 372 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYEL---------------LEK 434 (495)
T ss_dssp CEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHH---------------HHT
T ss_pred ceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHH---------------HHc
Confidence 2222234456789999999998899999999999999999999 99999764321 11111 111
Q ss_pred c-CCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCCC
Q 012213 419 R-LSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKPN 463 (468)
Q Consensus 419 ~-~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~~ 463 (468)
. ....+......+.+++..||+.||++|||+.||++.|+.+....
T Consensus 435 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~~ 480 (495)
T 1opk_A 435 DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 480 (495)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSSS
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhcc
Confidence 1 11223345567888999999999999999999999999885443
No 42
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=5.8e-45 Score=350.67 Aligned_cols=261 Identities=24% Similarity=0.360 Sum_probs=212.3
Q ss_pred hhccCCcceEcccCCcceEEEEc------CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCe
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT------PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKET 254 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 254 (468)
.++|...+.||+|+||.||+|.+ .+++.||||++.... .....+.+.+|+.+++.++||||+++++++.+.+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA-SPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 56788889999999999999986 345789999986432 22334678899999999999999999999999999
Q ss_pred eEEEEeccCCCChhhhcccCCC----------------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCC
Q 012213 255 NLLVYEYMPNGSLGEVLHGKRG----------------------SFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVK 312 (468)
Q Consensus 255 ~~lv~e~~~~gsL~~~l~~~~~----------------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk 312 (468)
.++||||+++|+|.+++..... ..+++..++.++.||+.||+|||+.+ |+|||||
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dik 177 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLA 177 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCCCS
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---Ccccccc
Confidence 9999999999999999975432 34899999999999999999999887 9999999
Q ss_pred CCcEEEcCCCceEEeeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCC
Q 012213 313 SNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFG 391 (468)
Q Consensus 313 ~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~ 391 (468)
|+||+++.++.+||+|||+++...............+++.|+|||.+.+..++.++||||||+++|||+| |+.||....
T Consensus 178 p~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 257 (314)
T 2ivs_A 178 ARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP 257 (314)
T ss_dssp GGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred hheEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 9999999999999999999987654333333344567889999999998889999999999999999999 999997643
Q ss_pred CCCcCHHHHHHHhhcccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccC
Q 012213 392 EEGLDIVQWTKMQTNSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQK 461 (468)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 461 (468)
... +... +........+......+.+++..|++.||++||++.|+++.|+++..
T Consensus 258 ~~~--~~~~--------------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 258 PER--LFNL--------------LKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp GGG--HHHH--------------HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHH--HHHH--------------hhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 211 1111 11111122233445678899999999999999999999999998743
No 43
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1e-44 Score=366.20 Aligned_cols=253 Identities=28% Similarity=0.411 Sum_probs=208.9
Q ss_pred hhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCC-eeEEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKE-TNLLVY 259 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~ 259 (468)
.+.|+..+.||+|+||.||+|.+. |+.||||+++... ..+.|.+|+.++++++||||+++++++.... ..++||
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~ 266 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 266 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence 467788899999999999999885 7899999986432 3367999999999999999999999987665 689999
Q ss_pred eccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccC
Q 012213 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTG 339 (468)
Q Consensus 260 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 339 (468)
||+++|+|.+++.......+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 267 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~- 342 (450)
T 1k9a_A 267 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST- 342 (450)
T ss_dssp ECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC---
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCccccccc-
Confidence 9999999999998655556899999999999999999999887 999999999999999999999999999854321
Q ss_pred CCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccc
Q 012213 340 ASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQ 418 (468)
Q Consensus 340 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 418 (468)
.....++..|+|||.+.+..++.++||||||+++|||+| |+.||....... ... .+...
T Consensus 343 ----~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~--------------~i~~~ 402 (450)
T 1k9a_A 343 ----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVP--------------RVEKG 402 (450)
T ss_dssp --------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--HHH--------------HHHTT
T ss_pred ----ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHH--------------HHHcC
Confidence 122356889999999999999999999999999999999 999997643221 111 11111
Q ss_pred cCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCC
Q 012213 419 RLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKP 462 (468)
Q Consensus 419 ~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~ 462 (468)
.....+......+.+++..||+.||++|||+.|+++.|+.+...
T Consensus 403 ~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 403 YKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 11223334567788999999999999999999999999988644
No 44
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.5e-45 Score=361.26 Aligned_cols=260 Identities=25% Similarity=0.381 Sum_probs=212.0
Q ss_pred hhccCCcceEcccCCcceEEEEcC--------CCcEEEEEEecccCCCCCchhHHHHHHHHHhCC-CCCCccceeEEEec
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP--------NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSN 251 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 251 (468)
.++|...+.||+|+||+||+|.+. ++..||||++.... .......+.+|+++++++ +||||+++++++..
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeecccc-CHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 467888899999999999999852 34579999986432 222335688999999999 89999999999999
Q ss_pred CCeeEEEEeccCCCChhhhcccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEE
Q 012213 252 KETNLLVYEYMPNGSLGEVLHGKR--------------GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNIL 317 (468)
Q Consensus 252 ~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nil 317 (468)
.+..++||||+++|+|.+++.... ...+++..++.++.||+.||+|||+.+ |+||||||+|||
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIl 223 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVL 223 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEE
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceEE
Confidence 999999999999999999997543 235899999999999999999999887 999999999999
Q ss_pred EcCCCceEEeeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcC
Q 012213 318 LNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLD 396 (468)
Q Consensus 318 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~ 396 (468)
++.++.+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||+| |..||.....
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~---- 299 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV---- 299 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH----
T ss_pred EcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH----
Confidence 99999999999999987754433334445567899999999999999999999999999999999 9999975321
Q ss_pred HHHHHHHhhcccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213 397 IVQWTKMQTNSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ 460 (468)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 460 (468)
.+...... .......+......+.+++..||+.||++|||+.||++.|+++.
T Consensus 300 -~~~~~~~~-----------~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 351 (382)
T 3tt0_A 300 -EELFKLLK-----------EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 351 (382)
T ss_dssp -HHHHHHHH-----------TTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -HHHHHHHH-----------cCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11111111 11111222334567888999999999999999999999998874
No 45
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=4.6e-45 Score=353.60 Aligned_cols=258 Identities=25% Similarity=0.430 Sum_probs=201.6
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcE----EEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCee
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQ----VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETN 255 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 255 (468)
.++|+..+.||+|+||+||+|.+. +++. ||+|.+.... .......+.+|+.++++++||||++++++|.... .
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~ 91 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-E
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc-CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-e
Confidence 456788899999999999999964 3443 5888775432 2233467999999999999999999999998754 7
Q ss_pred EEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccc
Q 012213 256 LLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYL 335 (468)
Q Consensus 256 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 335 (468)
++|+||+++|+|.+++.... ..+++..++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 92 ~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 167 (327)
T 3poz_A 92 QLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEEEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred EEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCcceeEc
Confidence 89999999999999997533 45899999999999999999999887 999999999999999999999999999877
Q ss_pred cccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhh
Q 012213 336 QDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVK 414 (468)
Q Consensus 336 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (468)
.............+|+.|+|||++.+..++.++||||||+++|||+| |+.||....... +. .
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~~---------------~ 230 (327)
T 3poz_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--IS---------------S 230 (327)
T ss_dssp TTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HH---------------H
T ss_pred cCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH--HH---------------H
Confidence 54443333344567889999999999999999999999999999999 999997643211 11 1
Q ss_pred hccc-cCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccC
Q 012213 415 ILDQ-RLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQK 461 (468)
Q Consensus 415 ~~d~-~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 461 (468)
.+.. .....+......+.+++.+||+.+|++||++.|+++.|+.+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 231 ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp HHHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred HHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 1111 1122233455678889999999999999999999999987643
No 46
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-45 Score=361.80 Aligned_cols=260 Identities=25% Similarity=0.336 Sum_probs=210.0
Q ss_pred hhccCCcceEcccCCcceEEEEcC------CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCe
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP------NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKET 254 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 254 (468)
.++|+..+.||+|+||+||+|.+. +++.||||++.... .......+.+|+.++++++||||+++++++.....
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 148 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 148 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccccc-ChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 467888899999999999999843 46789999986332 22233568899999999999999999999999999
Q ss_pred eEEEEeccCCCChhhhcccCC-----CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC---ceEE
Q 012213 255 NLLVYEYMPNGSLGEVLHGKR-----GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF---EAHV 326 (468)
Q Consensus 255 ~~lv~e~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl 326 (468)
.++||||+++|+|.+++.... ...+++..++.++.||+.||+|||+.+ |+||||||+|||++.++ .+||
T Consensus 149 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL 225 (367)
T 3l9p_A 149 RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKI 225 (367)
T ss_dssp CEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEE
T ss_pred CEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEE
Confidence 999999999999999997533 235899999999999999999999887 99999999999999555 5999
Q ss_pred eeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhh
Q 012213 327 ADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQT 405 (468)
Q Consensus 327 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 405 (468)
+|||+++.+.............||+.|+|||++.+..++.++|||||||++|||+| |+.||..... .+...
T Consensus 226 ~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~-----~~~~~--- 297 (367)
T 3l9p_A 226 GDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-----QEVLE--- 297 (367)
T ss_dssp CCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-----HHHHH---
T ss_pred CCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHH---
Confidence 99999987654444344445668999999999998899999999999999999998 9999975321 11111
Q ss_pred cccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213 406 NSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ 460 (468)
Q Consensus 406 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 460 (468)
.+........+......+.+++..||+.||++|||+.||++.|+.+.
T Consensus 298 --------~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~ 344 (367)
T 3l9p_A 298 --------FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 344 (367)
T ss_dssp --------HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --------HHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 11111111222334556888999999999999999999999998764
No 47
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.8e-44 Score=346.90 Aligned_cols=269 Identities=22% Similarity=0.299 Sum_probs=204.5
Q ss_pred chhhhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEE
Q 012213 178 DDILECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLL 257 (468)
Q Consensus 178 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 257 (468)
+.+.++|+..+.||+|+||+||+|.+.+|+.||||++............+.+|++++++++||||+++++++.+.+..++
T Consensus 17 q~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 96 (311)
T 3niz_A 17 QGLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTL 96 (311)
T ss_dssp ECSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEE
T ss_pred cchHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEE
Confidence 34578899999999999999999999889999999997554444444678899999999999999999999999999999
Q ss_pred EEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccc
Q 012213 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQD 337 (468)
Q Consensus 258 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 337 (468)
||||++ |+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 97 v~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~ 171 (311)
T 3niz_A 97 VFEFME-KDLKKVLDEN-KTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGI 171 (311)
T ss_dssp EEECCS-EEHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEETTS
T ss_pred EEcCCC-CCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceecCC
Confidence 999997 5888887643 345899999999999999999999887 99999999999999999999999999987642
Q ss_pred cCCCccccccccCccccCccccCC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhh-
Q 012213 338 TGASECMSAVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKI- 415 (468)
Q Consensus 338 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 415 (468)
. ........||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .+..................
T Consensus 172 ~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~ 248 (311)
T 3niz_A 172 P--VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFSILGTPNPREWPQVQ 248 (311)
T ss_dssp C--CC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHHHHHCCCCTTTSGGGT
T ss_pred C--cccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHHCCCChHHhhhhh
Confidence 2 222344578999999998876 568999999999999999999999997643221 11111111111110000000
Q ss_pred -----ccccC---CCCC-----HHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 416 -----LDQRL---SNTP-----LSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 416 -----~d~~~---~~~~-----~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.+... ...+ .....++.+++..|++.||++|||++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp TSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred ccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 00000 1111 112346788999999999999999999987
No 48
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.3e-45 Score=360.38 Aligned_cols=262 Identities=26% Similarity=0.401 Sum_probs=209.6
Q ss_pred hhccCCcceEcccCCcceEEEEc------CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCC-CCCCccceeEEEecCC
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT------PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKE 253 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 253 (468)
.++|+..+.||+|+||.||+|.+ .+++.||||++.... .....+.+.+|++++.++ +||||+++++++.+.+
T Consensus 21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 99 (359)
T 3vhe_A 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 99 (359)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC-CHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCC
Confidence 57788899999999999999973 356789999986432 122235689999999999 7899999999998765
Q ss_pred e-eEEEEeccCCCChhhhcccCCC--------------------------------------------------------
Q 012213 254 T-NLLVYEYMPNGSLGEVLHGKRG-------------------------------------------------------- 276 (468)
Q Consensus 254 ~-~~lv~e~~~~gsL~~~l~~~~~-------------------------------------------------------- 276 (468)
. .++||||+++|+|.+++.....
T Consensus 100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (359)
T 3vhe_A 100 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 179 (359)
T ss_dssp SCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------------
T ss_pred CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhc
Confidence 5 8999999999999999975432
Q ss_pred --------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccCCCccccccc
Q 012213 277 --------SFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVA 348 (468)
Q Consensus 277 --------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~ 348 (468)
..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.+.............
T Consensus 180 ~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 256 (359)
T 3vhe_A 180 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 256 (359)
T ss_dssp ----CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CE
T ss_pred ccccchhccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccC
Confidence 12899999999999999999999887 9999999999999999999999999998765443333445567
Q ss_pred cCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccccCCCCCHHH
Q 012213 349 GSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQRLSNTPLSE 427 (468)
Q Consensus 349 gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 427 (468)
||+.|+|||++.+..++.++||||||+++|||+| |+.||....... .... . +........+...
T Consensus 257 ~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~--~------------~~~~~~~~~~~~~ 321 (359)
T 3vhe_A 257 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCR--R------------LKEGTRMRAPDYT 321 (359)
T ss_dssp ECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHH--H------------HHHTCCCCCCTTC
T ss_pred CCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-HHHH--H------------HHcCCCCCCCCCC
Confidence 8999999999999999999999999999999999 999997643211 0100 0 0011111222234
Q ss_pred HHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccC
Q 012213 428 AMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQK 461 (468)
Q Consensus 428 ~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 461 (468)
...+.+++..|++.||++|||+.|+++.|+++..
T Consensus 322 ~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 322 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 4568889999999999999999999999998753
No 49
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=4.9e-45 Score=345.97 Aligned_cols=257 Identities=23% Similarity=0.373 Sum_probs=207.8
Q ss_pred hhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEe
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYE 260 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 260 (468)
.++|+..+.||+|+||+||+|.+.++..||||++.... ...+.+.+|++++.+++||||+++++++.+.+..++|||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 99 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS---MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS---BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC---CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence 56788889999999999999999988899999986432 223678999999999999999999999999999999999
Q ss_pred ccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccCC
Q 012213 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGA 340 (468)
Q Consensus 261 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 340 (468)
|+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 100 ~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~- 174 (283)
T 3gen_A 100 YMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE- 174 (283)
T ss_dssp CCTTCBHHHHHHCG-GGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH-
T ss_pred ccCCCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEccccccccccccc-
Confidence 99999999999753 235899999999999999999999887 9999999999999999999999999998664221
Q ss_pred CccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcccc
Q 012213 341 SECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQR 419 (468)
Q Consensus 341 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 419 (468)
........+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...... +.. ..+....
T Consensus 175 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~-----~~~-----------~~~~~~~ 238 (283)
T 3gen_A 175 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-----ETA-----------EHIAQGL 238 (283)
T ss_dssp HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHH-----------HHHHTTC
T ss_pred cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh-----HHH-----------HHHhccc
Confidence 112233456788999999998899999999999999999999 99999763311 111 1111111
Q ss_pred CCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccC
Q 012213 420 LSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQK 461 (468)
Q Consensus 420 ~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 461 (468)
....+......+.+++..|++.+|++|||+.|+++.|+++..
T Consensus 239 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 239 RLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence 111222334568889999999999999999999999998753
No 50
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.1e-44 Score=344.57 Aligned_cols=261 Identities=25% Similarity=0.308 Sum_probs=202.4
Q ss_pred hhhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhC--CCCCCccceeEEEec----CC
Q 012213 180 ILECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGK--IRHRNIVRLKAFCSN----KE 253 (468)
Q Consensus 180 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~----~~ 253 (468)
+.++|+..+.||+|+||+||+|.+ +++.||||++... ....+..|.+++.. ++||||+++++++.. ..
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~ 79 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR-----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSST 79 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEE
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc-----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCc
Confidence 356788999999999999999988 6899999998532 22445556665554 799999999998654 34
Q ss_pred eeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhh--------hcCCCCeeecCCCCCcEEEcCCCceE
Q 012213 254 TNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLH--------HDCSPLIIHRDVKSNNILLNSDFEAH 325 (468)
Q Consensus 254 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivH~dlk~~Nill~~~~~~k 325 (468)
..++||||+++|+|.++++. ..+++..+++++.|++.||+||| +.+ |+||||||+|||++.++.+|
T Consensus 80 ~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~~k 153 (301)
T 3q4u_A 80 QLWLITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQCC 153 (301)
T ss_dssp EEEEEECCCTTCBHHHHHTT---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSCEE
T ss_pred eeEEehhhccCCCHHHHHhh---cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCCEE
Confidence 57899999999999999953 35899999999999999999999 666 99999999999999999999
Q ss_pred EeeccccccccccCCCc--cccccccCccccCccccCCC------CCCcchhhHHHHHHHHHHHhC----------CCCC
Q 012213 326 VADFGLAKYLQDTGASE--CMSAVAGSYGYIAPEYAYTL------KVDEKSDVYSFGVVLLELITG----------RRPV 387 (468)
Q Consensus 326 l~Dfgla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~G~~l~elltg----------~~p~ 387 (468)
|+|||+++......... ......||+.|+|||++.+. .++.++||||||+++|||+|| +.||
T Consensus 154 l~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf 233 (301)
T 3q4u_A 154 IADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPF 233 (301)
T ss_dssp ECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccc
Confidence 99999998765332211 12334799999999998876 455799999999999999999 8888
Q ss_pred CCCCCCCcCHHHHHHHhhcccccchhhhccccCC--CCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhc
Q 012213 388 GDFGEEGLDIVQWTKMQTNSSKEGVVKILDQRLS--NTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQA 459 (468)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 459 (468)
..................... ...... .........+.+++..||+.||++|||+.||++.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 234 YDVVPNDPSFEDMRKVVCVDQ-------QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TTTSCSSCCHHHHHHHHTTSC-------CCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cccCCCCcchhhhhHHHhccC-------CCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 664333333333222211111 001111 11235678899999999999999999999999999875
No 51
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=8.7e-44 Score=348.42 Aligned_cols=252 Identities=21% Similarity=0.275 Sum_probs=206.0
Q ss_pred chhhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCC----CchhHHHHHHHHHhCCCCCCccceeEEEecC
Q 012213 178 DDILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGS----SHDNGLSAEIRTLGKIRHRNIVRLKAFCSNK 252 (468)
Q Consensus 178 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 252 (468)
..+.+.|+..+.||+|+||.||+|.+. +|+.||||.+....... ...+.+.+|+.++..++||||+++++++.+.
T Consensus 8 ~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~ 87 (361)
T 2yab_A 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENR 87 (361)
T ss_dssp SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred CChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeC
Confidence 345677889999999999999999985 68999999987544322 1236789999999999999999999999999
Q ss_pred CeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC----ceEEee
Q 012213 253 ETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF----EAHVAD 328 (468)
Q Consensus 253 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~D 328 (468)
...++||||+++|+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+||+++.++ .+||+|
T Consensus 88 ~~~~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~D 162 (361)
T 2yab_A 88 TDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLID 162 (361)
T ss_dssp SEEEEEEECCCSCBHHHHHTTC--SCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred CEEEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEe
Confidence 9999999999999999999643 45899999999999999999999887 99999999999998877 799999
Q ss_pred ccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhccc
Q 012213 329 FGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSS 408 (468)
Q Consensus 329 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
||++..+... .......||+.|+|||++.+..++.++|||||||++|||++|..||.+... .+...
T Consensus 163 FG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~-----~~~~~------ 228 (361)
T 2yab_A 163 FGLAHEIEDG---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-----QETLA------ 228 (361)
T ss_dssp CSSCEECCTT---CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-----HHHHH------
T ss_pred cCCceEcCCC---CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-----HHHHH------
Confidence 9999876532 223456799999999999998999999999999999999999999975321 11111
Q ss_pred ccchhhhccccCCCCCH----HHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 409 KEGVVKILDQRLSNTPL----SEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 409 ~~~~~~~~d~~~~~~~~----~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.+..... ..+. .....+.+++..|+..||++|||+.|+++
T Consensus 229 -----~i~~~~~-~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 229 -----NITAVSY-DFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp -----HHHTTCC-CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -----HHHhcCC-CCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1111110 1111 12356778999999999999999999975
No 52
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.3e-44 Score=344.30 Aligned_cols=263 Identities=29% Similarity=0.420 Sum_probs=198.4
Q ss_pred hhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEe
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYE 260 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 260 (468)
...|+..+.||+|+||+||+|.+.. .||||++..........+.+.+|+.++++++||||+++++++ .....++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 4568889999999999999998753 599999875544444456789999999999999999999965 4566899999
Q ss_pred ccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccCC
Q 012213 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGA 340 (468)
Q Consensus 261 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 340 (468)
|+++++|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++........
T Consensus 100 ~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 175 (289)
T 3og7_A 100 WCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175 (289)
T ss_dssp CCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC----------
T ss_pred ecCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceeccccccccc
Confidence 99999999999643 346899999999999999999999887 99999999999999999999999999986653333
Q ss_pred CccccccccCccccCccccC---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcc
Q 012213 341 SECMSAVAGSYGYIAPEYAY---TLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILD 417 (468)
Q Consensus 341 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 417 (468)
........||+.|+|||.+. +..++.++||||||+++|||++|+.||...... .......... ...
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~-------~~~ 244 (289)
T 3og7_A 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR----DQIIEMVGRG-------SLS 244 (289)
T ss_dssp --------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH----HHHHHHHHHT-------SCC
T ss_pred cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH----HHHHHHhccc-------ccC
Confidence 33344567999999999886 567889999999999999999999999763321 1111111110 011
Q ss_pred ccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccC
Q 012213 418 QRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQK 461 (468)
Q Consensus 418 ~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 461 (468)
.............+.+++..|++.+|++|||+.|++++|+++..
T Consensus 245 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 245 PDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp CCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred cchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 11122223445678899999999999999999999999998864
No 53
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=5.6e-44 Score=340.71 Aligned_cols=265 Identities=25% Similarity=0.359 Sum_probs=207.3
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCC-CchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGS-SHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
.++|+..+.||+|+||.||+|.+. +++.||+|++....... ...+.+.+|+..+.+++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 567888999999999999999974 68899999986543322 2235788999999999999999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
|||+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 90 ~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 164 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESH--GPLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164 (294)
T ss_dssp EECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred EeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence 9999999999999643 35899999999999999999999887 999999999999999999999999999876532
Q ss_pred CCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccc
Q 012213 339 GASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQ 418 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 418 (468)
.........||+.|+|||.+.+..++.++||||||+++|||+||+.||..... ................
T Consensus 165 -~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~-----~~~~~~~~~~~~~~~~----- 233 (294)
T 4eqm_A 165 -SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA-----VSIAIKHIQDSVPNVT----- 233 (294)
T ss_dssp -----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH-----HHHHHHHHSSCCCCHH-----
T ss_pred -cccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHhhccCCCcc-----
Confidence 22223446789999999999999999999999999999999999999975321 1111111111100000
Q ss_pred cCCCCCHHHHHHHHHHHHhhcccCCCCCC-CHHHHHHHHHhccCCC
Q 012213 419 RLSNTPLSEAMQVFFVAMLCVQEHGVERP-TMREVVQMLAQAQKPN 463 (468)
Q Consensus 419 ~~~~~~~~~~~~~~~l~~~c~~~~P~~RP-t~~ev~~~L~~~~~~~ 463 (468)
..........+.+++.+|++.||++|| +++++.+.|+.+...+
T Consensus 234 --~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 234 --TDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp --HHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred --hhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence 001122345678899999999999998 9999999999875443
No 54
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-44 Score=353.29 Aligned_cols=264 Identities=25% Similarity=0.397 Sum_probs=210.4
Q ss_pred hhccCCcceEcccCCcceEEEEc------CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCC-CCCCccceeEEEecCC
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT------PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKE 253 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 253 (468)
.++|+..+.||+|+||.||+|.+ .++..||||.+..... ....+.+.+|+.++.++ +||||+++++++...+
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD-SSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccC-HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 56788899999999999999986 2456899999874322 23346799999999999 8999999999999999
Q ss_pred eeEEEEeccCCCChhhhcccCCC---------------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCC
Q 012213 254 TNLLVYEYMPNGSLGEVLHGKRG---------------------SFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVK 312 (468)
Q Consensus 254 ~~~lv~e~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk 312 (468)
..++||||+++|+|.+++..... ..+++..++.++.||+.||+|||+.+ |+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCC
Confidence 99999999999999999975432 23799999999999999999999887 9999999
Q ss_pred CCcEEEcCCCceEEeeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCC
Q 012213 313 SNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFG 391 (468)
Q Consensus 313 ~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~ 391 (468)
|+||+++.++.+||+|||++................+|+.|+|||.+.+..++.++||||||+++|||+| |..||....
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~ 279 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP 279 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence 9999999999999999999987764443333445567889999999988899999999999999999998 999997643
Q ss_pred CCCcCHHHHHHHhhcccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCCC
Q 012213 392 EEGLDIVQWTKMQTNSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKPN 463 (468)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~~ 463 (468)
... ....... . ......+......+.+++..||+.||.+|||+.|+++.|+.+....
T Consensus 280 ~~~-~~~~~~~----~----------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 280 VDA-NFYKLIQ----N----------GFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADA 336 (344)
T ss_dssp CSH-HHHHHHH----T----------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred cHH-HHHHHHh----c----------CCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHH
Confidence 211 1111100 0 0011122234567888999999999999999999999999886543
No 55
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2.9e-44 Score=348.62 Aligned_cols=250 Identities=23% Similarity=0.270 Sum_probs=204.6
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCC-CCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITK-GSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
.++|+..+.||+|+||+||+|.++ +|+.||+|++..... .......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 467888899999999999999975 689999999864321 223346688999999999999999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 84 ~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 158 (337)
T 1o6l_A 84 MEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 158 (337)
T ss_dssp EECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred EeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhcccC
Confidence 9999999999998643 35899999999999999999999887 999999999999999999999999999864322
Q ss_pred CCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccc
Q 012213 339 GASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQ 418 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 418 (468)
........||+.|+|||++.+..++.++|||||||++|||++|+.||...+. ....... ...
T Consensus 159 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~~i-----------~~~ 220 (337)
T 1o6l_A 159 --GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----ERLFELI-----------LME 220 (337)
T ss_dssp --TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHH-----------HHC
T ss_pred --CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH-----HHHHHHH-----------HcC
Confidence 2234556799999999999999999999999999999999999999975321 1111111 111
Q ss_pred cCCCCCHHHHHHHHHHHHhhcccCCCCCC-----CHHHHHH
Q 012213 419 RLSNTPLSEAMQVFFVAMLCVQEHGVERP-----TMREVVQ 454 (468)
Q Consensus 419 ~~~~~~~~~~~~~~~l~~~c~~~~P~~RP-----t~~ev~~ 454 (468)
. ...+......+.+++..|++.||++|| +++|+++
T Consensus 221 ~-~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 221 E-IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp C-CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred C-CCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 1 112223456678899999999999999 8999875
No 56
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=4.7e-44 Score=345.56 Aligned_cols=248 Identities=23% Similarity=0.311 Sum_probs=202.4
Q ss_pred ccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEec
Q 012213 183 CVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEY 261 (468)
Q Consensus 183 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 261 (468)
.|+..+.||+|+||.||+|.+. +|+.||||++..... ...+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 123 (321)
T 2c30_A 46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ--QRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEF 123 (321)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--CSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch--hHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEec
Confidence 3556679999999999999986 799999999864332 3346788999999999999999999999999999999999
Q ss_pred cCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccCCC
Q 012213 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGAS 341 (468)
Q Consensus 262 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 341 (468)
+++|+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 124 ~~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-- 195 (321)
T 2c30_A 124 LQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-- 195 (321)
T ss_dssp CCSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSS--
T ss_pred CCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCcEEEeeeeeeeecccCc--
Confidence 999999999864 24899999999999999999999887 9999999999999999999999999998765322
Q ss_pred ccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccccCC
Q 012213 342 ECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQRLS 421 (468)
Q Consensus 342 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 421 (468)
.......||+.|+|||++.+..++.++||||||+++|||++|+.||..... .+........ .....
T Consensus 196 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~-----~~~~~~~~~~--------~~~~~- 261 (321)
T 2c30_A 196 PKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP-----VQAMKRLRDS--------PPPKL- 261 (321)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----HHHHHHHHHS--------SCCCC-
T ss_pred cccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHhcC--------CCCCc-
Confidence 223456799999999999999999999999999999999999999965321 1111110000 00011
Q ss_pred CCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 422 NTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 422 ~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.........+.+++.+|++.||++|||+.|+++
T Consensus 262 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 262 KNSHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp TTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111223456788999999999999999999987
No 57
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.3e-44 Score=350.11 Aligned_cols=259 Identities=26% Similarity=0.414 Sum_probs=203.6
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcE----EEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCee
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQ----VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETN 255 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 255 (468)
.+.|+..+.||+|+||+||+|.+. +++. ||+|.+..... ......+.+|+.+++.++||||+++++++. .+..
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 89 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG-RQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSL 89 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTS-CSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccccc-HHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCcc
Confidence 456788899999999999999974 3443 78887754322 222355788999999999999999999986 4568
Q ss_pred EEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccc
Q 012213 256 LLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYL 335 (468)
Q Consensus 256 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 335 (468)
++||||+++|+|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.+
T Consensus 90 ~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 165 (325)
T 3kex_A 90 QLVTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLL 165 (325)
T ss_dssp EEEEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred EEEEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCccccc
Confidence 8999999999999999743 346889999999999999999999887 999999999999999999999999999987
Q ss_pred cccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhh
Q 012213 336 QDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVK 414 (468)
Q Consensus 336 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (468)
.............++..|+|||++.+..++.++||||||+++|||+| |+.||...... .......
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~------------ 231 (325)
T 3kex_A 166 PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--EVPDLLE------------ 231 (325)
T ss_dssp CCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--HHHHHHH------------
T ss_pred CcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--HHHHHHH------------
Confidence 64444444455678889999999998899999999999999999999 99999763321 1111110
Q ss_pred hccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccC
Q 012213 415 ILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQK 461 (468)
Q Consensus 415 ~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 461 (468)
.......+......+.+++..||+.||++||++.|+++.|+.+..
T Consensus 232 --~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~ 276 (325)
T 3kex_A 232 --KGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276 (325)
T ss_dssp --TTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTT
T ss_pred --cCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 001111122233456789999999999999999999999988753
No 58
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.4e-44 Score=340.31 Aligned_cols=257 Identities=22% Similarity=0.349 Sum_probs=208.3
Q ss_pred hhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecC--CeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNK--ETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv 258 (468)
.++|+..+.||+|+||+||+|.+. ++.||||++..........+.+.+|+.++++++||||+++++++.+. ...++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 567888899999999999999985 88999999876544444446789999999999999999999999887 778999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
|||+++|+|.+++.......+++..++.++.|++.||+|||+.+ .+++||||||+||+++.++.++|+|||++....
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~-- 164 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQ-- 164 (271)
T ss_dssp EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS--
T ss_pred ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeec--
Confidence 99999999999998766557999999999999999999999643 339999999999999999999999999876432
Q ss_pred CCCccccccccCccccCccccCCCCCCc---chhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhh
Q 012213 339 GASECMSAVAGSYGYIAPEYAYTLKVDE---KSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKI 415 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (468)
.....||+.|+|||.+.+..++. ++||||||+++|||+||+.||..... .+.......
T Consensus 165 -----~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~~~~~~~~~--------- 225 (271)
T 3kmu_A 165 -----SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN-----MEIGMKVAL--------- 225 (271)
T ss_dssp -----CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH-----HHHHHHHHH---------
T ss_pred -----ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh-----HHHHHHHHh---------
Confidence 12346799999999988765444 89999999999999999999975331 111111000
Q ss_pred ccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccC
Q 012213 416 LDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQK 461 (468)
Q Consensus 416 ~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 461 (468)
.......+......+.+++..|++.||++|||++|+++.|+++..
T Consensus 226 -~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 226 -EGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp -SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred -cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 011112223345678889999999999999999999999998864
No 59
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.3e-45 Score=352.28 Aligned_cols=268 Identities=28% Similarity=0.386 Sum_probs=205.0
Q ss_pred hhccCCcceEcccCCcceEEEEc-----CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecC--C
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-----PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNK--E 253 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~ 253 (468)
.+.|+..+.||+|+||+||+|.+ .+++.||||++.... ....+.+.+|+.++++++||||+++++++... .
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST--EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 86 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 56788889999999999999983 468899999986332 22335788999999999999999999998653 4
Q ss_pred eeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q 012213 254 TNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAK 333 (468)
Q Consensus 254 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~ 333 (468)
..++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~~ 162 (295)
T 3ugc_A 87 NLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTK 162 (295)
T ss_dssp SCEEEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSCC
T ss_pred ceEEEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCcccc
Confidence 5899999999999999997543 35899999999999999999999887 9999999999999999999999999998
Q ss_pred cccccCCC-ccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccc---
Q 012213 334 YLQDTGAS-ECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSK--- 409 (468)
Q Consensus 334 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--- 409 (468)
........ .......++..|+|||.+.+..++.++||||||+++|||+||..|+.... ..+.........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~------~~~~~~~~~~~~~~~ 236 (295)
T 3ugc_A 163 VLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP------AEFMRMIGNDKQGQM 236 (295)
T ss_dssp -------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHH------HHHHHHHCTTCCTHH
T ss_pred cccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCCh------HHHHhhhcCccccch
Confidence 76533221 22234457788999999999999999999999999999999999986421 011110000000
Q ss_pred ---cchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213 410 ---EGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ 460 (468)
Q Consensus 410 ---~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 460 (468)
.....+........+......+.+++..||+.||++|||+.|+++.|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~ 290 (295)
T 3ugc_A 237 IVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 290 (295)
T ss_dssp HHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 001111111122334455677889999999999999999999999999875
No 60
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.2e-44 Score=340.30 Aligned_cols=258 Identities=24% Similarity=0.407 Sum_probs=210.8
Q ss_pred hhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEe
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYE 260 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 260 (468)
.+.|+..+.||+|+||.||+|.+.+++.||+|++..... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTE 83 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB---CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC---CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEe
Confidence 456788899999999999999998889999999864332 23678999999999999999999999999999999999
Q ss_pred ccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccCC
Q 012213 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGA 340 (468)
Q Consensus 261 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 340 (468)
|+++++|.+++... ...+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++...... .
T Consensus 84 ~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~-~ 158 (267)
T 3t9t_A 84 FMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD-Q 158 (267)
T ss_dssp CCTTCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH-H
T ss_pred CCCCCcHHHHHhhC-cccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEcccccccccccc-c
Confidence 99999999999754 345899999999999999999999887 999999999999999999999999999865421 1
Q ss_pred CccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcccc
Q 012213 341 SECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQR 419 (468)
Q Consensus 341 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 419 (468)
........++..|+|||...+..++.++||||||+++|||++ |+.||..... ...... +....
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~~-----------i~~~~ 222 (267)
T 3t9t_A 159 YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-----SEVVED-----------ISTGF 222 (267)
T ss_dssp HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHHHH-----------HHTTC
T ss_pred ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH-----HHHHHH-----------HhcCC
Confidence 112233456789999999998899999999999999999999 8999975321 111111 11111
Q ss_pred CCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCC
Q 012213 420 LSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKP 462 (468)
Q Consensus 420 ~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~ 462 (468)
....+......+.+++..|++.||++||++.|+++.|+++...
T Consensus 223 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 223 RLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred cCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 1112223356678899999999999999999999999988643
No 61
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2e-44 Score=339.56 Aligned_cols=256 Identities=29% Similarity=0.437 Sum_probs=196.5
Q ss_pred hhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCC--CCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKG--SSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
.++|+..+.||+|+||.||+|.+. ++.||||++...... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 457888899999999999999985 889999988654332 22346788999999999999999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC--------CCceEEeecc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS--------DFEAHVADFG 330 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~--------~~~~kl~Dfg 330 (468)
|||+++++|.+++.. ..+++..+..++.|++.||+|||+.+..+|+||||||+||+++. ++.+||+|||
T Consensus 85 ~e~~~~~~L~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg 161 (271)
T 3dtc_A 85 MEFARGGPLNRVLSG---KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161 (271)
T ss_dssp EECCTTEEHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred EEcCCCCCHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence 999999999999853 35899999999999999999999876555899999999999986 6789999999
Q ss_pred ccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhccccc
Q 012213 331 LAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKE 410 (468)
Q Consensus 331 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 410 (468)
++....... .....||+.|+|||.+.+..++.++||||||+++|||++|+.||...... ........
T Consensus 162 ~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~~~~~~---- 228 (271)
T 3dtc_A 162 LAREWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL-----AVAYGVAM---- 228 (271)
T ss_dssp C-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH-----HHHHHHHT----
T ss_pred ccccccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHhhhc----
Confidence 998654321 22456899999999999989999999999999999999999999753311 00000000
Q ss_pred chhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhc
Q 012213 411 GVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQA 459 (468)
Q Consensus 411 ~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 459 (468)
.......+......+.+++..|++.||++|||+.|+++.|+++
T Consensus 229 ------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 229 ------NKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp ------SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred ------CCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 0011122233456788999999999999999999999999864
No 62
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=3e-44 Score=341.36 Aligned_cols=257 Identities=25% Similarity=0.353 Sum_probs=213.4
Q ss_pred hhccCCcceEcccCCcceEEEEcCC-CcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPN-GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 259 (468)
.++|+..+.||+|+||+||+|.+.. +..||+|.+... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 88 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC---STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence 5678888999999999999999864 788999998632 233467899999999999999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccC
Q 012213 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTG 339 (468)
Q Consensus 260 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 339 (468)
||+++++|.+++.......+++..+..++.+++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 89 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~- 164 (288)
T 3kfa_A 89 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD- 164 (288)
T ss_dssp ECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSS-
T ss_pred EcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceeccCC-
Confidence 9999999999998766667999999999999999999999888 999999999999999999999999999876532
Q ss_pred CCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccc
Q 012213 340 ASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQ 418 (468)
Q Consensus 340 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 418 (468)
.........+|+.|+|||.+.+..++.++||||||+++|||++ |..||...... ...... ...
T Consensus 165 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~--~~~~~~--------------~~~ 228 (288)
T 3kfa_A 165 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELL--------------EKD 228 (288)
T ss_dssp SSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHH--------------HTT
T ss_pred ccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHH--------------hcc
Confidence 2223344557889999999998899999999999999999999 99999764321 111111 001
Q ss_pred cCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213 419 RLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ 460 (468)
Q Consensus 419 ~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 460 (468)
.....+......+.+++..|++.||++|||+.|+++.|+.+.
T Consensus 229 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~ 270 (288)
T 3kfa_A 229 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 270 (288)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHH
Confidence 111222334567889999999999999999999999998764
No 63
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.1e-44 Score=345.81 Aligned_cols=249 Identities=20% Similarity=0.269 Sum_probs=204.5
Q ss_pred hhhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEE
Q 012213 179 DILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLL 257 (468)
Q Consensus 179 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 257 (468)
++.+.|+..+.||+|+||+||+|.+. +++.||+|.+... ......+.+|+.+++.++||||+++++++.+.+..++
T Consensus 2 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 78 (321)
T 1tki_A 2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK---GTDQVLVKKEISILNIARHRNILHLHESFESMEELVM 78 (321)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC---THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEE
T ss_pred chhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC---cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEE
Confidence 34678889999999999999999985 5788999988532 2333568899999999999999999999999999999
Q ss_pred EEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC--CCceEEeeccccccc
Q 012213 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS--DFEAHVADFGLAKYL 335 (468)
Q Consensus 258 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~--~~~~kl~Dfgla~~~ 335 (468)
||||+++|+|.+++... ...+++..+..++.||+.||.|||+.+ |+||||||+||+++. ++.+||+|||+++.+
T Consensus 79 v~e~~~g~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~ 154 (321)
T 1tki_A 79 IFEFISGLDIFERINTS-AFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQL 154 (321)
T ss_dssp EECCCCCCBHHHHHTSS-SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEEC
T ss_pred EEEeCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeEC
Confidence 99999999999999643 345899999999999999999999887 999999999999987 789999999999876
Q ss_pred cccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhh
Q 012213 336 QDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKI 415 (468)
Q Consensus 336 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (468)
... .......||+.|+|||++.+..++.++||||||+++|||++|+.||..... .+... .+
T Consensus 155 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~~~-----------~i 215 (321)
T 1tki_A 155 KPG---DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN-----QQIIE-----------NI 215 (321)
T ss_dssp CTT---CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHH-----------HH
T ss_pred CCC---CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH-----HHHHH-----------HH
Confidence 522 223456789999999999988899999999999999999999999975321 11111 11
Q ss_pred ccccCCCCCH----HHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 416 LDQRLSNTPL----SEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 416 ~d~~~~~~~~----~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
...... .+. .....+.+++.+|+..||++|||+.|+++
T Consensus 216 ~~~~~~-~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 216 MNAEYT-FDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HHTCCC-CCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HcCCCC-CChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111110 111 12456788999999999999999999987
No 64
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=2.3e-44 Score=341.12 Aligned_cols=258 Identities=23% Similarity=0.346 Sum_probs=197.1
Q ss_pred hhccCCcceEcccCCcceEEEEcCC----CcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPN----GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNL 256 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 256 (468)
.+.|+..+.||+|+||.||+|.+.. +..||+|++.... .....+.+.+|+..+++++||||+++++++. .+..+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 91 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 91 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTT-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccE
Confidence 5678889999999999999998743 4569999876432 2223356889999999999999999999984 56789
Q ss_pred EEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccc
Q 012213 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQ 336 (468)
Q Consensus 257 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~ 336 (468)
+||||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 92 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (281)
T 1mp8_A 92 IIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYME 167 (281)
T ss_dssp EEEECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC--------
T ss_pred EEEecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECccccccccC
Confidence 999999999999999743 345899999999999999999999887 9999999999999999999999999998765
Q ss_pred ccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhhh
Q 012213 337 DTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKI 415 (468)
Q Consensus 337 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (468)
... ........+++.|+|||.+.+..++.++||||||+++|||++ |..||...... .... .+
T Consensus 168 ~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~--~~~~--------------~i 230 (281)
T 1mp8_A 168 DST-YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIG--------------RI 230 (281)
T ss_dssp ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHH--------------HH
T ss_pred ccc-ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH--HHHH--------------HH
Confidence 322 222234456789999999998899999999999999999997 99999764321 1111 11
Q ss_pred ccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccC
Q 012213 416 LDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQK 461 (468)
Q Consensus 416 ~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 461 (468)
........+......+.+++..|++.||++|||+.|+++.|+++..
T Consensus 231 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 231 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1111122233445678889999999999999999999999998753
No 65
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=6.3e-45 Score=375.08 Aligned_cols=263 Identities=29% Similarity=0.414 Sum_probs=214.3
Q ss_pred hhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEe
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYE 260 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 260 (468)
.+.|+..+.||+|+||.||+|.+.++..||||+++... ...+.|.+|+.++++++||||+++++++.+ +..++|||
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC---CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 46678889999999999999999888899999986433 223679999999999999999999999876 67899999
Q ss_pred ccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccCC
Q 012213 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGA 340 (468)
Q Consensus 261 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 340 (468)
|+++|+|.+++....+..+++.+++.++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.+... .
T Consensus 342 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-~ 417 (535)
T 2h8h_A 342 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDN-E 417 (535)
T ss_dssp CCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCH-H
T ss_pred hhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceecCCC-c
Confidence 999999999997554556899999999999999999999887 999999999999999999999999999876421 1
Q ss_pred CccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcccc
Q 012213 341 SECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQR 419 (468)
Q Consensus 341 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 419 (468)
........++..|+|||.+....++.++||||||+++|||+| |+.||.+.... +... .+....
T Consensus 418 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~-----~~~~-----------~i~~~~ 481 (535)
T 2h8h_A 418 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR-----EVLD-----------QVERGY 481 (535)
T ss_dssp HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH-----HHHH-----------HHHTTC
T ss_pred eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-----HHHH-----------HHHcCC
Confidence 111233456789999999998899999999999999999999 99999763311 1111 111111
Q ss_pred CCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCCCCccC
Q 012213 420 LSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKPNTFQM 467 (468)
Q Consensus 420 ~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~~~~~~ 467 (468)
....+......+.+++..||+.||++|||+++|+++|+++......+.
T Consensus 482 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~~~ 529 (535)
T 2h8h_A 482 RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQY 529 (535)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCSCSS
T ss_pred CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccCccc
Confidence 112233445678889999999999999999999999999876655544
No 66
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.9e-44 Score=346.91 Aligned_cols=262 Identities=26% Similarity=0.398 Sum_probs=212.3
Q ss_pred hhccCCcceEcccCCcceEEEEc------CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCC-CCCCccceeEEEecCC
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT------PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKE 253 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 253 (468)
.++|+..+.||+|+||.||+|.+ .+++.||||++..... ....+.+.+|+.++.++ +||||+++++++...+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 100 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNHMNIVNLLGACTIGG 100 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchh-HHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC
Confidence 46788889999999999999984 3567899999864322 22346789999999999 9999999999999999
Q ss_pred eeEEEEeccCCCChhhhcccCCC----------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEE
Q 012213 254 TNLLVYEYMPNGSLGEVLHGKRG----------------SFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNIL 317 (468)
Q Consensus 254 ~~~lv~e~~~~gsL~~~l~~~~~----------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nil 317 (468)
..++||||+++|+|.+++..... ..+++..++.++.|++.||+|||+.+ |+||||||+||+
T Consensus 101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil 177 (313)
T 1t46_A 101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNIL 177 (313)
T ss_dssp SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEE
T ss_pred CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEE
Confidence 99999999999999999975432 24899999999999999999999887 999999999999
Q ss_pred EcCCCceEEeeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcC
Q 012213 318 LNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLD 396 (468)
Q Consensus 318 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~ 396 (468)
++.++.+||+|||++................+|+.|+|||.+.+..++.++||||||+++|||+| |+.||....... .
T Consensus 178 ~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~ 256 (313)
T 1t46_A 178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-K 256 (313)
T ss_dssp EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH-H
T ss_pred EcCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh-H
Confidence 99999999999999987764433333345567889999999998899999999999999999999 999997643221 1
Q ss_pred HHHHHHHhhcccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccC
Q 012213 397 IVQWTKMQTNSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQK 461 (468)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 461 (468)
...... .... ...+......+.+++..|++.||++|||+.|+++.|+++..
T Consensus 257 ~~~~~~-----------~~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 307 (313)
T 1t46_A 257 FYKMIK-----------EGFR---MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307 (313)
T ss_dssp HHHHHH-----------HTCC---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHhc-----------cCCC---CCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 111100 0000 11122345678889999999999999999999999998753
No 67
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.3e-44 Score=342.25 Aligned_cols=256 Identities=28% Similarity=0.406 Sum_probs=208.6
Q ss_pred hhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEe
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYE 260 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 260 (468)
.+.|+..+.||+|+||.||+|.+.++..||||.+.... ...+.+.+|+++++.++||||+++++++. .+..++|||
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e 87 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITE 87 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc---ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEe
Confidence 46788889999999999999999888899999986432 23467899999999999999999999986 456899999
Q ss_pred ccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccCC
Q 012213 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGA 340 (468)
Q Consensus 261 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 340 (468)
|+++++|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||++++++.+||+|||++...... .
T Consensus 88 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~-~ 163 (279)
T 1qpc_A 88 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDN-E 163 (279)
T ss_dssp CCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSS-C
T ss_pred cCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccCc-c
Confidence 999999999997544346899999999999999999999887 999999999999999999999999999876532 2
Q ss_pred CccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcccc
Q 012213 341 SECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQR 419 (468)
Q Consensus 341 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 419 (468)
........++..|+|||.+.+..++.++||||||+++|||++ |+.||..... .+..... ....
T Consensus 164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----~~~~~~~-----------~~~~ 227 (279)
T 1qpc_A 164 YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN-----PEVIQNL-----------ERGY 227 (279)
T ss_dssp EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH-----HHHHHHH-----------HTTC
T ss_pred cccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH-----HHHHHHH-----------hccc
Confidence 222234456789999999988889999999999999999999 9999975321 1111111 0111
Q ss_pred CCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213 420 LSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ 460 (468)
Q Consensus 420 ~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 460 (468)
....+......+.+++..|++.+|++|||+.++++.|+++.
T Consensus 228 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 268 (279)
T 1qpc_A 228 RMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268 (279)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 11122234567888999999999999999999999999874
No 68
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.5e-43 Score=339.26 Aligned_cols=273 Identities=22% Similarity=0.276 Sum_probs=212.3
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCC--eeEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKE--TNLL 257 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~l 257 (468)
.+.|...+.||+|+||+||+|.+. +++.||||++...... ...+.+.+|++++++++||||+++++++.... ..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 86 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL-RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG-SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccccc-chHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEE
Confidence 467888999999999999999985 4899999998754322 22466889999999999999999999997765 6799
Q ss_pred EEeccCCCChhhhcccCCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEE----cCCCceEEeecccc
Q 012213 258 VYEYMPNGSLGEVLHGKRG-SFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL----NSDFEAHVADFGLA 332 (468)
Q Consensus 258 v~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~Dfgla 332 (468)
||||+++|+|.+++..... ..+++..+..++.||+.||+|||+.+ |+||||||+||++ +.++.+||+|||++
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a 163 (319)
T 4euu_A 87 IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (319)
T ss_dssp EEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence 9999999999999975433 24899999999999999999999887 9999999999999 78888999999999
Q ss_pred ccccccCCCccccccccCccccCccccC--------CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHh
Q 012213 333 KYLQDTGASECMSAVAGSYGYIAPEYAY--------TLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQ 404 (468)
Q Consensus 333 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 404 (468)
+.+.... ......||+.|+|||++. +..++.++|||||||++|||+||+.||.................
T Consensus 164 ~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 240 (319)
T 4euu_A 164 RELEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240 (319)
T ss_dssp EECCTTC---CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHH
T ss_pred eecCCCC---ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHh
Confidence 8765322 223456899999999875 56789999999999999999999999976433222211111111
Q ss_pred hccc---ccchhhhcc------ccC---CCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213 405 TNSS---KEGVVKILD------QRL---SNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ 460 (468)
Q Consensus 405 ~~~~---~~~~~~~~d------~~~---~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 460 (468)
.... ...+.+... ..+ ..........+.+++..|++.||++|||++|+++-..+..
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp HHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHT
T ss_pred cCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHh
Confidence 1110 000000000 011 2344677788899999999999999999999999887653
No 69
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2e-43 Score=341.85 Aligned_cols=256 Identities=22% Similarity=0.257 Sum_probs=205.8
Q ss_pred chhhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCC----CchhHHHHHHHHHhCCCCCCccceeEEEecC
Q 012213 178 DDILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGS----SHDNGLSAEIRTLGKIRHRNIVRLKAFCSNK 252 (468)
Q Consensus 178 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 252 (468)
+.+.+.|+..+.||+|+||.||+|.+. +|+.||||.+....... ...+.+.+|+.+++.++||||+++++++.+.
T Consensus 7 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 86 (326)
T 2y0a_A 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK 86 (326)
T ss_dssp SCHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred CCcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeC
Confidence 455678899999999999999999985 68999999987543322 1246789999999999999999999999999
Q ss_pred CeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC----ceEEee
Q 012213 253 ETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF----EAHVAD 328 (468)
Q Consensus 253 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~D 328 (468)
...++||||+++|+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+||+++.++ .+||+|
T Consensus 87 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~D 161 (326)
T 2y0a_A 87 TDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIID 161 (326)
T ss_dssp SEEEEEEECCCSCBHHHHHTTS--SCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECC
T ss_pred CEEEEEEEcCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEE
Confidence 9999999999999999999643 45899999999999999999999887 99999999999999887 899999
Q ss_pred ccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhccc
Q 012213 329 FGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSS 408 (468)
Q Consensus 329 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
||+++..... .......||+.|+|||++.+..++.++||||||+++|||++|+.||..... .+.........
T Consensus 162 fg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~~~~~~~~~ 233 (326)
T 2y0a_A 162 FGLAHKIDFG---NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-----QETLANVSAVN 233 (326)
T ss_dssp CTTCEECCTT---SCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-----HHHHHHHHHTC
T ss_pred CCCCeECCCC---CccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH-----HHHHHHHHhcC
Confidence 9999876422 123456799999999999988999999999999999999999999965321 11111000000
Q ss_pred ccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 409 KEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 409 ~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
...... ........+.+++..|++.||++|||+.|+++
T Consensus 234 ~~~~~~--------~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 234 YEFEDE--------YFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp CCCCHH--------HHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCcCcc--------ccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 000000 00112356778999999999999999999986
No 70
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.5e-44 Score=347.79 Aligned_cols=248 Identities=23% Similarity=0.317 Sum_probs=203.1
Q ss_pred hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCC-CCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITK-GSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
...|...+.||+|+||.||+|.+ .+++.||||++..... .......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 56788899999999999999997 5789999999864321 122235789999999999999999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
|||+ +|+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+||++++++.+||+|||++......
T Consensus 88 ~E~~-~g~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~ 161 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEK--KRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG 161 (336)
T ss_dssp ECCC-CEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred EECC-CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence 9999 78999988643 35899999999999999999999888 999999999999999999999999999876422
Q ss_pred CCCccccccccCccccCccccCCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcc
Q 012213 339 GASECMSAVAGSYGYIAPEYAYTLKV-DEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILD 417 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 417 (468)
.......||+.|+|||.+.+..+ ++++||||||+++|||++|+.||.+..... ..+.+.
T Consensus 162 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~-----------------~~~~i~ 221 (336)
T 3h4j_B 162 ---NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN-----------------LFKKVN 221 (336)
T ss_dssp ---BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT-----------------CBCCCC
T ss_pred ---cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH-----------------HHHHHH
Confidence 22345679999999999988775 789999999999999999999997632111 111111
Q ss_pred ccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 418 QRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 418 ~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
......+......+.+++..|++.||.+|||++|+++
T Consensus 222 ~~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 222 SCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp SSCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred cCCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 1111223334566788999999999999999999986
No 71
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.3e-43 Score=337.94 Aligned_cols=266 Identities=24% Similarity=0.315 Sum_probs=202.4
Q ss_pred hccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEe
Q 012213 182 ECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYE 260 (468)
Q Consensus 182 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 260 (468)
++|+..+.||+|+||+||+|.+. +++.||||++............+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 45778899999999999999985 68899999997655545445678899999999999999999999999999999999
Q ss_pred ccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccCC
Q 012213 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGA 340 (468)
Q Consensus 261 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 340 (468)
|+++ ++.+.+... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~~-~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 154 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIP-- 154 (292)
T ss_dssp CCSE-EHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCSC--
T ss_pred cCCC-CHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCCc--
Confidence 9975 666655432 345899999999999999999999887 999999999999999999999999999876422
Q ss_pred CccccccccCccccCccccCCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccc---hhhhc
Q 012213 341 SECMSAVAGSYGYIAPEYAYTLK-VDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEG---VVKIL 416 (468)
Q Consensus 341 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 416 (468)
........||+.|+|||++.+.. ++.++||||||+++|||++|..||.........+............+. ..+..
T Consensus 155 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 234 (292)
T 3o0g_A 155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234 (292)
T ss_dssp CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccc
Confidence 22234567899999999987765 899999999999999999988886442211111111111111110000 00000
Q ss_pred c----------ccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 417 D----------QRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 417 d----------~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
+ ..+..........+.+++..|++.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0 0001112234566788999999999999999999986
No 72
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=5.1e-44 Score=344.07 Aligned_cols=261 Identities=23% Similarity=0.335 Sum_probs=198.1
Q ss_pred hhccCCcceEcccCCcceEEEEcC----CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCe--
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP----NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKET-- 254 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-- 254 (468)
.+.|...+.||+|+||.||+|.+. .+..||||++..........+.+.+|+.++++++||||+++++++.+...
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 112 (313)
T 3brb_A 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQG 112 (313)
T ss_dssp GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-----
T ss_pred HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccC
Confidence 567888899999999999999864 34579999986544333334678999999999999999999999977653
Q ss_pred ---eEEEEeccCCCChhhhcccC----CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEe
Q 012213 255 ---NLLVYEYMPNGSLGEVLHGK----RGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327 (468)
Q Consensus 255 ---~~lv~e~~~~gsL~~~l~~~----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 327 (468)
.++||||+++|+|.+++... ....+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+
T Consensus 113 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kl~ 189 (313)
T 3brb_A 113 IPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMTVCVA 189 (313)
T ss_dssp --CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTTSCEEEC
T ss_pred CcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEEe
Confidence 49999999999999998432 3346999999999999999999999777 9999999999999999999999
Q ss_pred eccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhc
Q 012213 328 DFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTN 406 (468)
Q Consensus 328 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 406 (468)
|||++................+++.|+|||.+.+..++.++||||||+++|||++ |..||...... ....
T Consensus 190 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~------- 260 (313)
T 3brb_A 190 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH--EMYD------- 260 (313)
T ss_dssp SCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHH-------
T ss_pred ecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH--HHHH-------
Confidence 9999987653332233344567889999999999999999999999999999999 99999763321 1111
Q ss_pred ccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213 407 SSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ 460 (468)
Q Consensus 407 ~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 460 (468)
.+........+......+.+++..|++.||++|||+.++++.|+++.
T Consensus 261 -------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~ 307 (313)
T 3brb_A 261 -------YLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL 307 (313)
T ss_dssp -------HHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -------HHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11111112223334567889999999999999999999999999874
No 73
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=7e-44 Score=358.09 Aligned_cols=256 Identities=21% Similarity=0.262 Sum_probs=204.6
Q ss_pred hhhhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEE
Q 012213 179 DILECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLL 257 (468)
Q Consensus 179 ~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 257 (468)
.+.+.|+..+.||+|+||+||+|.+ .+|+.||+|++..........+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 4567889999999999999999987 468899999986544333334668899999999999999999999999999999
Q ss_pred EEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc---CCCceEEeecccccc
Q 012213 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLN---SDFEAHVADFGLAKY 334 (468)
Q Consensus 258 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfgla~~ 334 (468)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++ .++.+||+|||++..
T Consensus 88 v~E~~~gg~L~~~i~~~--~~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~a~~ 162 (444)
T 3soa_A 88 IFDLVTGGELFEDIVAR--EYYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLAIE 162 (444)
T ss_dssp EECCCBCCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSSCBC
T ss_pred EEEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCceeEE
Confidence 99999999999998644 35899999999999999999999887 99999999999998 467899999999987
Q ss_pred ccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhh
Q 012213 335 LQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVK 414 (468)
Q Consensus 335 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (468)
.... ........||+.|+|||++.+..++.++||||+||++|+|++|++||.+.+. ...........
T Consensus 163 ~~~~--~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~-----~~~~~~i~~~~------ 229 (444)
T 3soa_A 163 VEGE--QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ-----HRLYQQIKAGA------ 229 (444)
T ss_dssp CCTT--CCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHTC------
T ss_pred ecCC--CceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH-----HHHHHHHHhCC------
Confidence 6532 2223456799999999999999999999999999999999999999965321 11111100000
Q ss_pred hccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 415 ILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 415 ~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.+.. ..........+.+++..|++.||++|||+.|+++
T Consensus 230 -~~~~-~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 230 -YDFP-SPEWDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp -CCCC-TTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred -CCCC-ccccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0000 0011123456788999999999999999999986
No 74
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=2e-43 Score=342.58 Aligned_cols=260 Identities=18% Similarity=0.231 Sum_probs=207.4
Q ss_pred hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCC-CCCCccceeEEEecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 258 (468)
.++|+..+.||+|+||+||+|.+ .+++.||||.+..... ...+..|+.+++++ +||||+++++++...+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 83 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMV 83 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEE
Confidence 45688889999999999999996 5789999998864322 24588999999999 999999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc-----eEEeeccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE-----AHVADFGLAK 333 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-----~kl~Dfgla~ 333 (468)
|||+ +++|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++. +||+|||+++
T Consensus 84 ~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~ 158 (330)
T 2izr_A 84 LELL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAK 158 (330)
T ss_dssp EECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTCE
T ss_pred EEeC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEcccce
Confidence 9999 99999999753 346999999999999999999999887 999999999999999887 9999999998
Q ss_pred cccccCCCc-----cccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhccc
Q 012213 334 YLQDTGASE-----CMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSS 408 (468)
Q Consensus 334 ~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
.+....... ......||+.|+|||++.+..++.++||||||+++|||++|+.||....... ............
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~--~~~~~~~i~~~~ 236 (330)
T 2izr_A 159 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADT--LKERYQKIGDTK 236 (330)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSS--HHHHHHHHHHHH
T ss_pred eeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccccc--HHHHHHHHHhhh
Confidence 765332211 1245679999999999999999999999999999999999999998743221 111111100000
Q ss_pred c-cchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213 409 K-EGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ 460 (468)
Q Consensus 409 ~-~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 460 (468)
. ..... +.. ... .+.+++..|++.||.+||++.+|.+.|+++.
T Consensus 237 ~~~~~~~-----~~~---~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~ 280 (330)
T 2izr_A 237 RATPIEV-----LCE---NFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLF 280 (330)
T ss_dssp HHSCHHH-----HTT---TCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred ccCCHHH-----Hhc---cCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHH
Confidence 0 00000 000 112 7888999999999999999999999998763
No 75
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=8.6e-44 Score=345.02 Aligned_cols=253 Identities=21% Similarity=0.315 Sum_probs=199.3
Q ss_pred hhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCe----
Q 012213 180 ILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKET---- 254 (468)
Q Consensus 180 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~---- 254 (468)
+.++|+..+.||+|+||.||+|.+. +|+.||||++.... .....+.+.+|+.++++++||||+++++++.+...
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 82 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ 82 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence 3677889999999999999999985 78999999986433 23344679999999999999999999999865432
Q ss_pred -----------------------------------------------------eEEEEeccCCCChhhhcccCCC-CCCC
Q 012213 255 -----------------------------------------------------NLLVYEYMPNGSLGEVLHGKRG-SFLK 280 (468)
Q Consensus 255 -----------------------------------------------------~~lv~e~~~~gsL~~~l~~~~~-~~l~ 280 (468)
.++||||+++|+|.+++..... ...+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~ 162 (332)
T 3qd2_B 83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDRE 162 (332)
T ss_dssp HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSC
T ss_pred hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchh
Confidence 7899999999999999975432 3467
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccCCC----------ccccccccC
Q 012213 281 WEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGAS----------ECMSAVAGS 350 (468)
Q Consensus 281 ~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~----------~~~~~~~gt 350 (468)
+..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++........ .......||
T Consensus 163 ~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt 239 (332)
T 3qd2_B 163 HGVCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT 239 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-C
T ss_pred hHHHHHHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCC
Confidence 7789999999999999999887 999999999999999999999999999877533211 122345799
Q ss_pred ccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccccCCCCCHHHHHH
Q 012213 351 YGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQRLSNTPLSEAMQ 430 (468)
Q Consensus 351 ~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 430 (468)
+.|+|||++.+..++.++||||||+++|||++|..|+... .. ....................
T Consensus 240 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-------~~-----------~~~~~~~~~~~~~~~~~~~~ 301 (332)
T 3qd2_B 240 KLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-------VR-----------IITDVRNLKFPLLFTQKYPQ 301 (332)
T ss_dssp GGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-------HH-----------HHHHHHTTCCCHHHHHHCHH
T ss_pred cCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-------HH-----------HHHHhhccCCCcccccCChh
Confidence 9999999999999999999999999999999987774210 00 01111111111112334456
Q ss_pred HHHHHHhhcccCCCCCCCHHHHHH
Q 012213 431 VFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 431 ~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
+.+++..|++.||++|||+.|+++
T Consensus 302 ~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 302 EHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHccCCCCcCCCHHHHhh
Confidence 788999999999999999999986
No 76
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=3e-44 Score=348.95 Aligned_cols=260 Identities=24% Similarity=0.385 Sum_probs=209.2
Q ss_pred hhccCCcceEcccCCcceEEEEcC--------CCcEEEEEEecccCCCCCchhHHHHHHHHHhCC-CCCCccceeEEEec
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP--------NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSN 251 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 251 (468)
.+.|+..+.||+|+||.||+|.+. ++..||||++.... .......+.+|+.+++++ +||||+++++++..
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC-cHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 467888899999999999999863 46789999986432 222335688999999999 89999999999999
Q ss_pred CCeeEEEEeccCCCChhhhcccCCC--------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEE
Q 012213 252 KETNLLVYEYMPNGSLGEVLHGKRG--------------SFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNIL 317 (468)
Q Consensus 252 ~~~~~lv~e~~~~gsL~~~l~~~~~--------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nil 317 (468)
.+..++||||+++|+|.+++..... ..+++..++.++.||+.||+|||+.+ |+||||||+||+
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEE
Confidence 9999999999999999999975432 24899999999999999999999887 999999999999
Q ss_pred EcCCCceEEeeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcC
Q 012213 318 LNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLD 396 (468)
Q Consensus 318 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~ 396 (468)
++.++.+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||+| |+.||.....
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~---- 265 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV---- 265 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH----
T ss_pred EcCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH----
Confidence 99999999999999987654333233344567889999999988889999999999999999999 9999975321
Q ss_pred HHHHHHHhhcccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213 397 IVQWTKMQTNSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ 460 (468)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 460 (468)
.+..... ........+......+.+++..|++.+|.+|||+.|+++.|+++.
T Consensus 266 -~~~~~~~-----------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~ 317 (334)
T 2pvf_A 266 -EELFKLL-----------KEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317 (334)
T ss_dssp -HHHHHHH-----------HHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -HHHHHHH-----------hcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1111111 011111222334567888999999999999999999999998773
No 77
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=6.3e-44 Score=350.10 Aligned_cols=255 Identities=24% Similarity=0.309 Sum_probs=205.3
Q ss_pred hhhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEE
Q 012213 179 DILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLL 257 (468)
Q Consensus 179 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 257 (468)
.+.+.|+..+.||+|+||.||+|.+. +|+.||+|++..........+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 44678899999999999999999874 68999999987544333344678899999999999999999999999999999
Q ss_pred EEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC---ceEEeecccccc
Q 012213 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF---EAHVADFGLAKY 334 (468)
Q Consensus 258 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~Dfgla~~ 334 (468)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++ .+||+|||++..
T Consensus 106 v~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~ 180 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180 (362)
T ss_dssp EECCCCSCBHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred EEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence 99999999999998643 45899999999999999999999887 99999999999998654 599999999987
Q ss_pred ccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhh
Q 012213 335 LQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVK 414 (468)
Q Consensus 335 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (468)
.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+. ...........
T Consensus 181 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~-----~~~~~~i~~~~------ 246 (362)
T 2bdw_A 181 VNDS---EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-----HRLYAQIKAGA------ 246 (362)
T ss_dssp CTTC---CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHTC------
T ss_pred ecCC---cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHhCC------
Confidence 6522 223456799999999999998999999999999999999999999975321 11111100000
Q ss_pred hccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 415 ILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 415 ~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.+. ...........+.+++.+|++.||++|||+.|+++
T Consensus 247 -~~~-~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 247 -YDY-PSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp -CCC-CTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -CCC-CcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 000 00001123456788999999999999999999876
No 78
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=8.7e-44 Score=338.38 Aligned_cols=265 Identities=22% Similarity=0.304 Sum_probs=199.5
Q ss_pred hccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEec
Q 012213 182 ECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEY 261 (468)
Q Consensus 182 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 261 (468)
++|+..+.||+|+||+||+|.+.+|+.||||++............+.+|+.++++++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 45778899999999999999998899999999865443333346788999999999999999999999999999999999
Q ss_pred cCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccCCC
Q 012213 262 MPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGAS 341 (468)
Q Consensus 262 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 341 (468)
+++ +|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..... .
T Consensus 82 ~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~ 154 (288)
T 1ob3_A 82 LDQ-DLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIP--V 154 (288)
T ss_dssp CSE-EHHHHHHTS-TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred cCC-CHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCcc--c
Confidence 974 999988643 345899999999999999999999887 999999999999999999999999999876422 1
Q ss_pred ccccccccCccccCccccCC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccc---cchhh--h
Q 012213 342 ECMSAVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSK---EGVVK--I 415 (468)
Q Consensus 342 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~ 415 (468)
.......||+.|+|||++.+ ..++.++||||||+++|||+||+.||....... .+............ ....+ .
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T 1ob3_A 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRILGTPNSKNWPNVTELPK 233 (288)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHHCCCChhhchhhhcccc
Confidence 22334568999999999875 458999999999999999999999997633110 11111110000000 00000 0
Q ss_pred ccccCC--------CCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 416 LDQRLS--------NTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 416 ~d~~~~--------~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.+.... .........+.+++.+|++.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 011110 011123456788999999999999999999975
No 79
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.1e-43 Score=352.43 Aligned_cols=270 Identities=20% Similarity=0.242 Sum_probs=206.9
Q ss_pred hhccCCcceEccc--CCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEE
Q 012213 181 LECVKDNNVIGRG--GAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLL 257 (468)
Q Consensus 181 ~~~~~~~~~ig~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 257 (468)
..+|+..+.||+| +||+||+|.+. +|+.||||++............+.+|+.+++.++||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 5678889999999 99999999985 68999999997654444444678889999999999999999999999999999
Q ss_pred EEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccc
Q 012213 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQD 337 (468)
Q Consensus 258 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 337 (468)
||||+++|+|.+++.......+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 999999999999998765567999999999999999999999887 99999999999999999999999999876532
Q ss_pred cCCC-----ccccccccCccccCccccCC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcc---
Q 012213 338 TGAS-----ECMSAVAGSYGYIAPEYAYT--LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNS--- 407 (468)
Q Consensus 338 ~~~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~--- 407 (468)
.+.. .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+...... +..........
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~ 259 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM-LLEKLNGTVPCLLD 259 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTH-HHHC----------
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHhcCCCCcccc
Confidence 2211 11233478999999999987 6799999999999999999999999976432211 10000000000
Q ss_pred -----c------------ccchhhhcc----------ccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 408 -----S------------KEGVVKILD----------QRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 408 -----~------------~~~~~~~~d----------~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
. .......+. ......+......+.+++.+|++.||++|||+.|+++
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 260 TSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 0 000000000 0000112223456889999999999999999999985
No 80
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.7e-43 Score=336.44 Aligned_cols=264 Identities=17% Similarity=0.230 Sum_probs=209.2
Q ss_pred hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCC-CCCCccceeEEEecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 258 (468)
.++|+..+.||+|+||.||+|.+ .+++.||||++..... ...+.+|+..+..+ +|+|++++++++......++|
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 84 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD----APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV 84 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT----SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc----cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEE
Confidence 45688899999999999999996 5789999998854322 24588999999999 799999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc-----eEEeeccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE-----AHVADFGLAK 333 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-----~kl~Dfgla~ 333 (468)
|||+ +++|.+++... +..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++. +||+|||+++
T Consensus 85 ~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~ 159 (298)
T 1csn_A 85 IDLL-GPSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK 159 (298)
T ss_dssp EECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred EEec-CCCHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECcccc
Confidence 9999 99999999743 345899999999999999999999777 999999999999988776 9999999998
Q ss_pred cccccCCC-----ccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhccc
Q 012213 334 YLQDTGAS-----ECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSS 408 (468)
Q Consensus 334 ~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
........ .......||+.|+|||.+.+..++.++||||||+++|||++|+.||........ ...+........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~ 238 (298)
T 1csn_A 160 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN-KQKYERIGEKKQ 238 (298)
T ss_dssp ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH-HHHHHHHHHHHH
T ss_pred ccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhcccc-HHHHHHHHhhcc
Confidence 77543221 123456799999999999999999999999999999999999999987432211 111111000000
Q ss_pred ccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCC
Q 012213 409 KEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKP 462 (468)
Q Consensus 409 ~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~ 462 (468)
....... .......+.+++..|++.||++||++++|++.|+++...
T Consensus 239 ~~~~~~~--------~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~ 284 (298)
T 1csn_A 239 STPLREL--------CAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 284 (298)
T ss_dssp HSCHHHH--------TTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred CccHHHH--------HhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence 0000000 112345688899999999999999999999999987543
No 81
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=2.8e-44 Score=347.28 Aligned_cols=262 Identities=24% Similarity=0.377 Sum_probs=211.8
Q ss_pred hhccCCcceEcccCCcceEEEEcC------CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCe
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP------NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKET 254 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 254 (468)
.++|+..+.||+|+||.||+|.+. +++.||||.+.... .......+.+|+.+++.++||||+++++++.+.+.
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 102 (322)
T 1p4o_A 24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 102 (322)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS-CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSS
T ss_pred hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc-CHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCc
Confidence 567888999999999999999864 36789999986432 12223568899999999999999999999999999
Q ss_pred eEEEEeccCCCChhhhcccCC--------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEE
Q 012213 255 NLLVYEYMPNGSLGEVLHGKR--------GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHV 326 (468)
Q Consensus 255 ~~lv~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 326 (468)
.++||||+++|+|.+++.... ...+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||
T Consensus 103 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli~~~~~~kl 179 (322)
T 1p4o_A 103 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKI 179 (322)
T ss_dssp CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECTTCCEEE
T ss_pred cEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEEcCCCeEEE
Confidence 999999999999999986422 135789999999999999999999887 999999999999999999999
Q ss_pred eeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhh
Q 012213 327 ADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQT 405 (468)
Q Consensus 327 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 405 (468)
+|||+++...............+|+.|+|||.+.+..++.++||||||+++|||+| |+.||..... .+...
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----~~~~~--- 251 (322)
T 1p4o_A 180 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN-----EQVLR--- 251 (322)
T ss_dssp CCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH-----HHHHH---
T ss_pred CcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH-----HHHHH---
Confidence 99999987653333233344557889999999998899999999999999999999 8999975321 11111
Q ss_pred cccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCC
Q 012213 406 NSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKP 462 (468)
Q Consensus 406 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~ 462 (468)
.+........+......+.+++..|++.||++|||+.|+++.|+++..+
T Consensus 252 --------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 252 --------FVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp --------HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred --------HHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 1111122222334456688899999999999999999999999987543
No 82
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=3.9e-43 Score=333.62 Aligned_cols=257 Identities=28% Similarity=0.488 Sum_probs=203.5
Q ss_pred hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCch-----hHHHHHHHHHhCCCCCCccceeEEEecCCe
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHD-----NGLSAEIRTLGKIRHRNIVRLKAFCSNKET 254 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~-----~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 254 (468)
.+.|+..+.||+|+||+||+|.+ .+++.||||++.......... +.+.+|+.++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 45678889999999999999997 478999999986544332221 56889999999999999999999987655
Q ss_pred eEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc-----eEEeec
Q 012213 255 NLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE-----AHVADF 329 (468)
Q Consensus 255 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-----~kl~Df 329 (468)
++||||+++|+|.+++... ...+++..++.++.|++.||+|||+.+ ++|+||||||+||+++.++. +||+||
T Consensus 97 -~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~Df 173 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEECCC
T ss_pred -eEEEEecCCCCHHHHHhcc-cCCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeCCC
Confidence 7999999999999988643 346899999999999999999999653 33999999999999988776 999999
Q ss_pred cccccccccCCCccccccccCccccCcccc--CCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcc
Q 012213 330 GLAKYLQDTGASECMSAVAGSYGYIAPEYA--YTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNS 407 (468)
Q Consensus 330 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~--~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 407 (468)
|+++.... ......||+.|+|||.+ ....++.++||||||+++|||++|+.||........ .+.......
T Consensus 174 g~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~---~~~~~~~~~ 245 (287)
T 4f0f_A 174 GLSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI---KFINMIREE 245 (287)
T ss_dssp TTCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHH---HHHHHHHHS
T ss_pred Cccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHH---HHHHHHhcc
Confidence 99975431 23456789999999998 455678999999999999999999999976442221 111111111
Q ss_pred cccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhc
Q 012213 408 SKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQA 459 (468)
Q Consensus 408 ~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 459 (468)
. .....+......+.+++..|++.||++|||+.|+++.|+++
T Consensus 246 ~----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 246 G----------LRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp C----------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred C----------CCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 0 01122234456788999999999999999999999999874
No 83
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=3e-44 Score=350.24 Aligned_cols=252 Identities=23% Similarity=0.288 Sum_probs=196.9
Q ss_pred hhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCC--CCccceeEEEecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRH--RNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv 258 (468)
.+.|+..+.||+|+||.||++.+.+++.||||++..........+.+.+|+.++.+++| |||+++++++......++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 45688889999999999999999899999999987544433334678899999999976 9999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
||+ .+|+|.+++... ..+++.++..++.||+.||+|||+.+ |+||||||+|||++ ++.+||+|||+++.+...
T Consensus 88 ~e~-~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~ 160 (343)
T 3dbq_A 88 MEC-GNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 160 (343)
T ss_dssp ECC-CSEEHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCCC---
T ss_pred EeC-CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeecccccccCcc
Confidence 995 588999999753 35899999999999999999999887 99999999999997 578999999999877543
Q ss_pred CCCccccccccCccccCccccCC-----------CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcc
Q 012213 339 GASECMSAVAGSYGYIAPEYAYT-----------LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNS 407 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 407 (468)
..........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ..
T Consensus 161 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---~~--------- 228 (343)
T 3dbq_A 161 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ---IS--------- 228 (343)
T ss_dssp ---------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH---HH---------
T ss_pred cccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH---HH---------
Confidence 33333445679999999999854 67899999999999999999999999753211 11
Q ss_pred cccchhhhccccC-CCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 408 SKEGVVKILDQRL-SNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 408 ~~~~~~~~~d~~~-~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.....++... ...+......+.+++..|++.||++|||+.|+++
T Consensus 229 ---~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 229 ---KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp ---HHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ---HHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence 1111222111 1122223356778999999999999999999986
No 84
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.6e-43 Score=338.24 Aligned_cols=251 Identities=24% Similarity=0.303 Sum_probs=195.6
Q ss_pred hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCC------------------------CchhHHHHHHHHHh
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGS------------------------SHDNGLSAEIRTLG 235 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~------------------------~~~~~~~~e~~~l~ 235 (468)
.+.|+..+.||+|+||.||+|.+ .+++.||||++....... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 46788889999999999999987 468899999986432211 11256889999999
Q ss_pred CCCCCCccceeEEEec--CCeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCC
Q 012213 236 KIRHRNIVRLKAFCSN--KETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKS 313 (468)
Q Consensus 236 ~l~h~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~ 313 (468)
+++||||+++++++.+ ....++||||+++++|.+++.. ..+++..+..++.||+.||+|||+.+ |+||||||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp 165 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL---KPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKP 165 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS---SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCG
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCH
Confidence 9999999999999986 5678999999999999987643 35899999999999999999999887 99999999
Q ss_pred CcEEEcCCCceEEeeccccccccccCCCccccccccCccccCccccCCCC---CCcchhhHHHHHHHHHHHhCCCCCCCC
Q 012213 314 NNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLK---VDEKSDVYSFGVVLLELITGRRPVGDF 390 (468)
Q Consensus 314 ~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~s~G~~l~elltg~~p~~~~ 390 (468)
+||+++.++.+||+|||+++..... ........||+.|+|||.+.+.. ++.++||||||+++|||++|+.||...
T Consensus 166 ~Nil~~~~~~~kl~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 243 (298)
T 2zv2_A 166 SNLLVGEDGHIKIADFGVSNEFKGS--DALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE 243 (298)
T ss_dssp GGEEECTTSCEEECCCTTCEECSSS--SCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred HHEEECCCCCEEEecCCCccccccc--cccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc
Confidence 9999999999999999999876432 22234567999999999987665 478999999999999999999999652
Q ss_pred CCCCcCHHHHHHHhhcccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 391 GEEGLDIVQWTKMQTNSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
. ...+........ .. ..........+.+++.+|++.||++|||+.|+++
T Consensus 244 ~-----~~~~~~~~~~~~-------~~---~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 244 R-----IMCLHSKIKSQA-------LE---FPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp S-----HHHHHHHHHHCC-------CC---CCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred c-----HHHHHHHHhccc-------CC---CCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 2 111111111110 00 0011123456788999999999999999999874
No 85
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.6e-44 Score=344.60 Aligned_cols=259 Identities=24% Similarity=0.401 Sum_probs=200.2
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcE----EEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCee
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQ----VAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETN 255 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 255 (468)
.++|+..+.||+|+||+||+|.+. +++. ||+|.+.... .......+.+|+.+++.++||||+++++++.... .
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~ 91 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTST-V 91 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS-SCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-E
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc-CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-c
Confidence 456888899999999999999974 4443 5777765432 2334467999999999999999999999998754 7
Q ss_pred EEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccc
Q 012213 256 LLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYL 335 (468)
Q Consensus 256 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 335 (468)
++|+||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.+
T Consensus 92 ~~v~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~ 167 (327)
T 3lzb_A 92 QLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEEECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC----
T ss_pred eEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCcceeEc
Confidence 89999999999999997543 45899999999999999999999887 999999999999999999999999999877
Q ss_pred cccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhh
Q 012213 336 QDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVK 414 (468)
Q Consensus 336 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (468)
.............+|+.|+|||.+.+..++.++||||||+++|||++ |+.||....... +....
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~~------------- 232 (327)
T 3lzb_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSIL------------- 232 (327)
T ss_dssp ------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHH-------------
T ss_pred cCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHHHH-------------
Confidence 54333333344567889999999999999999999999999999999 999997643221 11111
Q ss_pred hccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccC
Q 012213 415 ILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQK 461 (468)
Q Consensus 415 ~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 461 (468)
........+......+.+++..||+.||++||++.|+++.|+++..
T Consensus 233 -~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 278 (327)
T 3lzb_A 233 -EKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp -HTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHT
T ss_pred -HcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence 0111122233345578889999999999999999999999998754
No 86
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1.5e-43 Score=348.89 Aligned_cols=252 Identities=22% Similarity=0.291 Sum_probs=204.4
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCC-CCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITK-GSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
.+.|+..+.||+|+||.||+|.+. +++.||+|++..... .......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 567888999999999999999975 578899999864321 223346788999999999999999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
|||+++|+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||++..+...
T Consensus 94 ~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 168 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQN--VHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE 168 (384)
T ss_dssp ECCCTTEEHHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence 9999999999999743 45899999999999999999999887 999999999999999999999999999876422
Q ss_pred CCCccccccccCccccCccccCC---CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhh
Q 012213 339 GASECMSAVAGSYGYIAPEYAYT---LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKI 415 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (468)
.......||+.|+|||++.. ..++.++|||||||++|||++|+.||....... .......
T Consensus 169 ---~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~--~~~~~~~------------ 231 (384)
T 4fr4_A 169 ---TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS--SKEIVHT------------ 231 (384)
T ss_dssp ---CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC--HHHHHHH------------
T ss_pred ---CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc--HHHHHHH------------
Confidence 23456789999999999864 458999999999999999999999997533221 1111111
Q ss_pred ccccCCCCCHHHHHHHHHHHHhhcccCCCCCCC-HHHHHH
Q 012213 416 LDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPT-MREVVQ 454 (468)
Q Consensus 416 ~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt-~~ev~~ 454 (468)
+.......+......+.+++..|++.||++||+ ++++.+
T Consensus 232 ~~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 232 FETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp HHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred HhhcccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 111112223344567888999999999999998 676654
No 87
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-43 Score=341.39 Aligned_cols=272 Identities=26% Similarity=0.323 Sum_probs=205.8
Q ss_pred hhhhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCC--CCCCccceeEEEecC----
Q 012213 179 DILECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKI--RHRNIVRLKAFCSNK---- 252 (468)
Q Consensus 179 ~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l--~h~niv~l~~~~~~~---- 252 (468)
.+.+.|+..+.||+|+||.||+|.+. ++.||||++.... ...+..|.+++... +||||+++++++...
T Consensus 34 ~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 107 (337)
T 3mdy_A 34 TIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE-----EASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107 (337)
T ss_dssp THHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred ccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc-----cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence 34678899999999999999999885 8999999985321 23455566665554 899999999999877
Q ss_pred CeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcC-----CCCeeecCCCCCcEEEcCCCceEEe
Q 012213 253 ETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDC-----SPLIIHRDVKSNNILLNSDFEAHVA 327 (468)
Q Consensus 253 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivH~dlk~~Nill~~~~~~kl~ 327 (468)
...++||||+++|+|.+++... .+++..++.++.|++.||+|||+.+ .++|+||||||+||+++.++.+||+
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~ 184 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIA 184 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC
T ss_pred CceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEE
Confidence 6789999999999999999643 4899999999999999999999761 1139999999999999999999999
Q ss_pred eccccccccccCCCc--cccccccCccccCccccCCCCCCcc------hhhHHHHHHHHHHHhC----------CCCCCC
Q 012213 328 DFGLAKYLQDTGASE--CMSAVAGSYGYIAPEYAYTLKVDEK------SDVYSFGVVLLELITG----------RRPVGD 389 (468)
Q Consensus 328 Dfgla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~------~Dv~s~G~~l~elltg----------~~p~~~ 389 (468)
|||+++.+....... ......||+.|+|||++.+.....+ +|||||||++|||+|| +.||..
T Consensus 185 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~ 264 (337)
T 3mdy_A 185 DLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHD 264 (337)
T ss_dssp CCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred eCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhh
Confidence 999998764322211 1234579999999999987766654 9999999999999999 666655
Q ss_pred CCCCCcCHHHHHHHhhcccccchhhhccccCC--CCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCCCCcc
Q 012213 390 FGEEGLDIVQWTKMQTNSSKEGVVKILDQRLS--NTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKPNTFQ 466 (468)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~~~~~ 466 (468)
..........+........ ...... .........+.+++..||+.||++|||+.||++.|+++.....++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~ 336 (337)
T 3mdy_A 265 LVPSDPSYEDMREIVCIKK-------LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQDIK 336 (337)
T ss_dssp TSCSSCCHHHHHHHHTTSC-------CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTTTCC
T ss_pred hcCCCCchhhhHHHHhhhc-------cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhcccC
Confidence 3322222222222111110 011111 012367788999999999999999999999999999997766543
No 88
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1.3e-43 Score=350.44 Aligned_cols=251 Identities=22% Similarity=0.282 Sum_probs=199.7
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCC-CCchhHHHHHHHHHhCC-CCCCccceeEEEecCCeeEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKG-SSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLL 257 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 257 (468)
.++|+..+.||+|+||+||+|.++ +++.||||+++..... ......+..|..++.++ +||||+++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 567888899999999999999975 5788999998754332 22235578899998876 89999999999999999999
Q ss_pred EEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccc
Q 012213 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQD 337 (468)
Q Consensus 258 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 337 (468)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 131 V~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEcCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 99999999999998643 35899999999999999999999887 99999999999999999999999999985332
Q ss_pred cCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCc---CHHHHHHHhhcccccchhh
Q 012213 338 TGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGL---DIVQWTKMQTNSSKEGVVK 414 (468)
Q Consensus 338 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 414 (468)
........+||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...++ +.+
T Consensus 206 --~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~-----------~~~ 272 (396)
T 4dc2_A 206 --PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY-----------LFQ 272 (396)
T ss_dssp --TTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHH-----------HHH
T ss_pred --CCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHH-----------HHH
Confidence 22234567899999999999999999999999999999999999999975321110 00111 111
Q ss_pred hccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCH
Q 012213 415 ILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTM 449 (468)
Q Consensus 415 ~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~ 449 (468)
.+.......+......+.+++..|++.||++||++
T Consensus 273 ~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 273 VILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp HHHHCCCCCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred HHhccccCCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 11111112233345677889999999999999995
No 89
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.6e-45 Score=351.22 Aligned_cols=264 Identities=27% Similarity=0.359 Sum_probs=189.8
Q ss_pred hhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhC--CCCCCccceeEEEecCC----e
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGK--IRHRNIVRLKAFCSNKE----T 254 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~----~ 254 (468)
.+.|+..+.||+|+||.||+|.+. ++.||||++... ....+..|.+++.. ++||||+++++++.... .
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 75 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 75 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T-----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc-----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccce
Confidence 357888999999999999999875 899999997532 23557778888877 79999999999998776 7
Q ss_pred eEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhh--------hcCCCCeeecCCCCCcEEEcCCCceEE
Q 012213 255 NLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLH--------HDCSPLIIHRDVKSNNILLNSDFEAHV 326 (468)
Q Consensus 255 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivH~dlk~~Nill~~~~~~kl 326 (468)
.++||||+++|+|.+++... .+++..++.++.|++.||+||| +.+ |+||||||+||+++.++.+||
T Consensus 76 ~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nil~~~~~~~kl 149 (303)
T 3gxj_A 76 LWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCI 149 (303)
T ss_dssp EEEEEECCTTCCHHHHHHHC---CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-B
T ss_pred eEEEEeccCCCCHHHHHhcc---CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC---EeeCcCCHHHeEECCCCCEEE
Confidence 89999999999999999643 4788899999999999999999 666 999999999999999999999
Q ss_pred eeccccccccccCCCc--cccccccCccccCccccCCC------CCCcchhhHHHHHHHHHHHhC----------CCCCC
Q 012213 327 ADFGLAKYLQDTGASE--CMSAVAGSYGYIAPEYAYTL------KVDEKSDVYSFGVVLLELITG----------RRPVG 388 (468)
Q Consensus 327 ~Dfgla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~G~~l~elltg----------~~p~~ 388 (468)
+|||+++......... ......||+.|+|||++.+. .++.++||||||+++|||+|| ..||.
T Consensus 150 ~DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~ 229 (303)
T 3gxj_A 150 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYY 229 (303)
T ss_dssp CCCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTT
T ss_pred eecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecccc
Confidence 9999998765332211 12334799999999998766 445789999999999999999 66665
Q ss_pred CCCCCCcCHHHHHHHhhcccccchhhhccccC-CCC-----CHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCC
Q 012213 389 DFGEEGLDIVQWTKMQTNSSKEGVVKILDQRL-SNT-----PLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKP 462 (468)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~-----~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~ 462 (468)
............. ..+.+... ... .......+.+++..||+.||++|||+.||+++|+++...
T Consensus 230 ~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~ 298 (303)
T 3gxj_A 230 DLVPSDPSVEEMR-----------KVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp TTCC-CCCCC-CH-----------HHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC
T ss_pred ccCCCCccHHHHH-----------HHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhh
Confidence 4221111111111 11111111 111 236667899999999999999999999999999999887
Q ss_pred CCccC
Q 012213 463 NTFQM 467 (468)
Q Consensus 463 ~~~~~ 467 (468)
...+|
T Consensus 299 ~~~~~ 303 (303)
T 3gxj_A 299 EGIKM 303 (303)
T ss_dssp -----
T ss_pred cccCC
Confidence 76553
No 90
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.4e-43 Score=346.52 Aligned_cols=252 Identities=24% Similarity=0.298 Sum_probs=202.7
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccC---CCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGIT---KGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNL 256 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 256 (468)
.+.|+..+.||+|+||+||+|.+. +|+.||||++.... ......+.+.+|+.+++.++||||+++++++.+.+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 567888999999999999999874 68999999985422 11223467899999999999999999999999999999
Q ss_pred EEEeccCCCChhhhcccC--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc---eEEeeccc
Q 012213 257 LVYEYMPNGSLGEVLHGK--RGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE---AHVADFGL 331 (468)
Q Consensus 257 lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfgl 331 (468)
+||||+++|+|.+++... .+..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 999999999998887543 2335899999999999999999999887 999999999999987655 99999999
Q ss_pred cccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccc
Q 012213 332 AKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEG 411 (468)
Q Consensus 332 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (468)
+...... ........||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+ +
T Consensus 180 a~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~---~~--~----------- 241 (351)
T 3c0i_A 180 AIQLGES--GLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE---RL--F----------- 241 (351)
T ss_dssp CEECCTT--SCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH---HH--H-----------
T ss_pred eeEecCC--CeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHH---HH--H-----------
Confidence 9876532 2223456799999999999999999999999999999999999999975210 00 1
Q ss_pred hhhhccccCCCCC---HHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 412 VVKILDQRLSNTP---LSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 412 ~~~~~d~~~~~~~---~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
..+........+ ......+.+++.+|++.||++|||+.|+++
T Consensus 242 -~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 242 -EGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp -HHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -HHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111111110000 112456788999999999999999999986
No 91
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.3e-44 Score=350.42 Aligned_cols=256 Identities=30% Similarity=0.436 Sum_probs=193.4
Q ss_pred cCCcceEcccCCcceEEEEcC--CC--cEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEec-CCeeEEE
Q 012213 184 VKDNNVIGRGGAGVVYRGVTP--NG--EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSN-KETNLLV 258 (468)
Q Consensus 184 ~~~~~~ig~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv 258 (468)
|...+.||+|+||+||+|.+. ++ ..||||.+.... .....+.+.+|+.++++++||||+++++++.. .+..++|
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS-CSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 556789999999999999864 22 358999876432 23334678999999999999999999998754 4577999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
|||+++|+|.+++.. ....+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++.+...
T Consensus 170 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp EECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EECCCCCCHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeecccccccccc
Confidence 999999999999974 3345889999999999999999999887 999999999999999999999999999876432
Q ss_pred CCC--ccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhhh
Q 012213 339 GAS--ECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKI 415 (468)
Q Consensus 339 ~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (468)
... .......+|+.|+|||.+.+..++.++||||||+++|||+| |.+||...... +.....
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~--~~~~~~-------------- 309 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYL-------------- 309 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS--CHHHHH--------------
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH--HHHHHH--------------
Confidence 211 12234457889999999999999999999999999999999 78888654322 111111
Q ss_pred ccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213 416 LDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ 460 (468)
Q Consensus 416 ~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 460 (468)
........+......+.+++..||+.||++|||+.|+++.|+++.
T Consensus 310 ~~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~ 354 (373)
T 3c1x_A 310 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 354 (373)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 111111122334567888999999999999999999999998764
No 92
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=4.4e-43 Score=331.17 Aligned_cols=255 Identities=22% Similarity=0.301 Sum_probs=207.5
Q ss_pred hhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213 180 ILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 180 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
+.++|+..+.||+|+||.||+|.+. +++.||||.+..... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC-TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc-hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEE
Confidence 3577888999999999999999985 689999999864332 23346789999999999999999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
|||+++++|.+++... ..+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++..+...
T Consensus 84 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 158 (276)
T 2yex_A 84 LEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158 (276)
T ss_dssp EECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEET
T ss_pred EEecCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCccccCCC
Confidence 9999999999999643 45899999999999999999999887 999999999999999999999999999876533
Q ss_pred CCCccccccccCccccCccccCCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcc
Q 012213 339 GASECMSAVAGSYGYIAPEYAYTLKV-DEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILD 417 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 417 (468)
..........|++.|+|||.+.+..+ +.++||||||+++|||++|+.||............|... ..
T Consensus 159 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---~~--------- 226 (276)
T 2yex_A 159 NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK---KT--------- 226 (276)
T ss_dssp TEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTT---CT---------
T ss_pred cchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhc---cc---------
Confidence 33333445678999999999987765 679999999999999999999997644332222222110 00
Q ss_pred ccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 418 QRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 418 ~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
...........+.+++..|++.||++|||+.|+++
T Consensus 227 --~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 227 --YLNPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp --TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --ccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 00011223456778999999999999999999976
No 93
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=2.7e-43 Score=343.21 Aligned_cols=269 Identities=26% Similarity=0.360 Sum_probs=211.5
Q ss_pred hhhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhC--CCCCCccceeEEEecCC----
Q 012213 180 ILECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGK--IRHRNIVRLKAFCSNKE---- 253 (468)
Q Consensus 180 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~---- 253 (468)
+.+.|+..+.||+|+||.||+|.+ +|+.||||++... ....+..|++++.. ++||||+++++++....
T Consensus 40 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~ 113 (342)
T 1b6c_B 40 IARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 113 (342)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG-----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCC
T ss_pred ccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch-----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccc
Confidence 356788999999999999999998 5899999998532 23557788888776 79999999999998876
Q ss_pred eeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhh--------hcCCCCeeecCCCCCcEEEcCCCceE
Q 012213 254 TNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLH--------HDCSPLIIHRDVKSNNILLNSDFEAH 325 (468)
Q Consensus 254 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH--------~~~~~~ivH~dlk~~Nill~~~~~~k 325 (468)
..++||||+++|+|.+++... .+++..++.++.|++.||+||| +.+ |+||||||+||+++.++.+|
T Consensus 114 ~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NIll~~~~~~k 187 (342)
T 1b6c_B 114 QLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCC 187 (342)
T ss_dssp CEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGEEECTTSCEE
T ss_pred eeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHEEECCCCCEE
Confidence 789999999999999999643 4899999999999999999999 566 99999999999999999999
Q ss_pred EeeccccccccccCCCc--cccccccCccccCccccCCC------CCCcchhhHHHHHHHHHHHhC----------CCCC
Q 012213 326 VADFGLAKYLQDTGASE--CMSAVAGSYGYIAPEYAYTL------KVDEKSDVYSFGVVLLELITG----------RRPV 387 (468)
Q Consensus 326 l~Dfgla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~Dv~s~G~~l~elltg----------~~p~ 387 (468)
|+|||++.......... ......||+.|+|||++.+. .++.++||||||+++|||+|| ..||
T Consensus 188 L~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~ 267 (342)
T 1b6c_B 188 IADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPY 267 (342)
T ss_dssp ECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTT
T ss_pred EEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCc
Confidence 99999998765332211 22445789999999998765 234789999999999999999 7788
Q ss_pred CCCCCCCcCHHHHHHHhhcccccchhhhccccCCC--CCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCCCCc
Q 012213 388 GDFGEEGLDIVQWTKMQTNSSKEGVVKILDQRLSN--TPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKPNTF 465 (468)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~~~~ 465 (468)
............+........ ....+.. ........+.+++..||+.||++|||+.||++.|+++......
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~~~ 340 (342)
T 1b6c_B 268 YDLVPSDPSVEEMRKVVCEQK-------LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGI 340 (342)
T ss_dssp TTTSCSSCCHHHHHHHHTTSC-------CCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTTC-
T ss_pred cccCcCcccHHHHHHHHHHHH-------hCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHhcC
Confidence 664433333333333221111 1111111 1236677899999999999999999999999999999877765
Q ss_pred cC
Q 012213 466 QM 467 (468)
Q Consensus 466 ~~ 467 (468)
+|
T Consensus 341 ~~ 342 (342)
T 1b6c_B 341 KM 342 (342)
T ss_dssp --
T ss_pred CC
Confidence 53
No 94
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=7.6e-44 Score=353.07 Aligned_cols=251 Identities=22% Similarity=0.296 Sum_probs=197.2
Q ss_pred hccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCC--CCCccceeEEEecCCeeEEEE
Q 012213 182 ECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIR--HRNIVRLKAFCSNKETNLLVY 259 (468)
Q Consensus 182 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv~ 259 (468)
..|+..+.||+|+||.||+|.+.+++.||||++............+.+|+.++.+++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 458888999999999999999988999999998654433334467899999999996 599999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccC
Q 012213 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTG 339 (468)
Q Consensus 260 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 339 (468)
| +.+++|.+++.... .+++..+..++.||+.||.|||+.+ |+||||||+|||++ ++.+||+|||+++.+....
T Consensus 136 E-~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp E-CCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred e-cCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 9 56889999997543 5889999999999999999999877 99999999999995 5899999999998775433
Q ss_pred CCccccccccCccccCccccCC-----------CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhccc
Q 012213 340 ASECMSAVAGSYGYIAPEYAYT-----------LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSS 408 (468)
Q Consensus 340 ~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
.........||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ..
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~----~~--------- 275 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ----IS--------- 275 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCH----HH---------
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHH----HH---------
Confidence 3333445679999999998864 46889999999999999999999999753211 11
Q ss_pred ccchhhhccccC-CCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 409 KEGVVKILDQRL-SNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 409 ~~~~~~~~d~~~-~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.+..+++... ...+......+.+++..||+.||++|||+.|+++
T Consensus 276 --~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 276 --KLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp --HHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred --HHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 1112222211 1112222456788999999999999999999986
No 95
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.6e-44 Score=343.50 Aligned_cols=247 Identities=21% Similarity=0.258 Sum_probs=193.9
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCC-CCCCccceeEEEecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 258 (468)
.++|+..+.||+|+||+||+|.+. +|+.||||++............+..|+..+.++ +||||++++++|.+.+..++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 567888999999999999999986 789999999865443333334455666655555 899999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
|||+ +++|.+++... ...++|..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++......
T Consensus 136 ~e~~-~~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~ 210 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAW-GASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA 210 (311)
T ss_dssp EECC-CCBHHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC--
T ss_pred Eecc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeecccC
Confidence 9999 77999988643 345999999999999999999999887 999999999999999999999999999876422
Q ss_pred CCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccc
Q 012213 339 GASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQ 418 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 418 (468)
.......||+.|+|||++.+ .++.++||||||+++|||++|..|+... ..|........ ..
T Consensus 211 ---~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~-------~~~~~~~~~~~--------~~ 271 (311)
T 3p1a_A 211 ---GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG-------EGWQQLRQGYL--------PP 271 (311)
T ss_dssp -------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH-------HHHHHHTTTCC--------CH
T ss_pred ---CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc-------cHHHHHhccCC--------Cc
Confidence 22345569999999998876 7999999999999999999997765431 11211111000 00
Q ss_pred cCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 419 RLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 419 ~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
. .+......+.+++..|++.||++|||+.|+++
T Consensus 272 ~---~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 272 E---FTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp H---HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred c---cccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 0 01123456888999999999999999999986
No 96
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-43 Score=349.09 Aligned_cols=255 Identities=20% Similarity=0.278 Sum_probs=205.0
Q ss_pred chhhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeE
Q 012213 178 DDILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNL 256 (468)
Q Consensus 178 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 256 (468)
..+.+.|+..+.||+|+||.||+|.+. +|+.||+|.+.... ......+.+|+.+++.++||||+++++++.+....+
T Consensus 47 ~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~ 124 (387)
T 1kob_A 47 GSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY--PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMV 124 (387)
T ss_dssp SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEE
T ss_pred CccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc--hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEE
Confidence 445678899999999999999999885 68899999885432 122356889999999999999999999999999999
Q ss_pred EEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC--CCceEEeecccccc
Q 012213 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS--DFEAHVADFGLAKY 334 (468)
Q Consensus 257 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~--~~~~kl~Dfgla~~ 334 (468)
+||||+++|+|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++. ++.+||+|||+++.
T Consensus 125 lv~E~~~gg~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~ 200 (387)
T 1kob_A 125 LILEFLSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATK 200 (387)
T ss_dssp EEEECCCCCBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEE
T ss_pred EEEEcCCCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEeccccee
Confidence 999999999999998743 345899999999999999999999887 999999999999974 47799999999987
Q ss_pred ccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhh
Q 012213 335 LQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVK 414 (468)
Q Consensus 335 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (468)
+... .......||+.|+|||++.+..++.++|||||||++|||+||+.||..... .+..........
T Consensus 201 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~-----~~~~~~i~~~~~----- 267 (387)
T 1kob_A 201 LNPD---EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD-----LETLQNVKRCDW----- 267 (387)
T ss_dssp CCTT---SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH-----HHHHHHHHHCCC-----
T ss_pred cCCC---cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH-----HHHHHHHHhCCC-----
Confidence 6532 223345789999999999999999999999999999999999999975321 111111110000
Q ss_pred hccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 415 ILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 415 ~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
..+ ..........+.+++..|++.||++|||+.|+++
T Consensus 268 ~~~---~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 268 EFD---EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp CCC---SSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CCC---ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 000 1111233456788999999999999999999987
No 97
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1e-43 Score=349.28 Aligned_cols=269 Identities=16% Similarity=0.213 Sum_probs=205.0
Q ss_pred hhccCCcceEcccCCcceEEEEcCC------CcEEEEEEecccCCCCC---------chhHHHHHHHHHhCCCCCCccce
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPN------GEQVAVKKLLGITKGSS---------HDNGLSAEIRTLGKIRHRNIVRL 245 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~---------~~~~~~~e~~~l~~l~h~niv~l 245 (468)
.+.|+..+.||+|+||.||+|.+.+ ++.||||++........ ....+..|+..+..++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4578899999999999999998865 47899999754321000 00123455667778899999999
Q ss_pred eEEEecC----CeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc--
Q 012213 246 KAFCSNK----ETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLN-- 319 (468)
Q Consensus 246 ~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-- 319 (468)
++++... ...++||||+ +++|.+++... ...+++..++.++.||+.||+|||+.+ |+||||||+|||++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEESS
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEEecC
Confidence 9998764 4479999999 99999999753 346999999999999999999999887 99999999999999
Q ss_pred CCCceEEeeccccccccccCCCc-----cccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCC
Q 012213 320 SDFEAHVADFGLAKYLQDTGASE-----CMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEG 394 (468)
Q Consensus 320 ~~~~~kl~Dfgla~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~ 394 (468)
.++.+||+|||+++.+....... ......||+.|+|||++.+..++.++|||||||++|||+||+.||.+....
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~- 267 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD- 267 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC-
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC-
Confidence 88999999999998765332211 123455999999999999999999999999999999999999999753221
Q ss_pred cCHHHHHHHhhcccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213 395 LDIVQWTKMQTNSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ 460 (468)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 460 (468)
.....+..... ...+..+++..+.. ......+.+++..||+.+|++||++.++++.|+++.
T Consensus 268 ~~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~ 328 (364)
T 3op5_A 268 PKYVRDSKIRY---RENIASLMDKCFPA--ANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGL 328 (364)
T ss_dssp HHHHHHHHHHH---HHCHHHHHHHHSCT--TCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHh---hhhHHHHHHHhccc--ccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Confidence 11222222111 12344444444321 122456788999999999999999999999998764
No 98
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-43 Score=339.08 Aligned_cols=247 Identities=26% Similarity=0.322 Sum_probs=203.3
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCC-CCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITK-GSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
.++|+..+.||+|+||.||+|... +|+.||+|++..... .....+.+.+|+.+++.++||||+++++++.+....++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 467888899999999999999985 689999999864321 122335688999999999999999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 85 ~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~- 158 (318)
T 1fot_A 85 MDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPD- 158 (318)
T ss_dssp ECCCCSCBHHHHHHHT--SSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSS-
T ss_pred EeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceecCC-
Confidence 9999999999999743 35899999999999999999999777 99999999999999999999999999986542
Q ss_pred CCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccc
Q 012213 339 GASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQ 418 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 418 (468)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...+. ... ...+...
T Consensus 159 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~-----------~~~i~~~ 218 (318)
T 1fot_A 159 ----VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT-----MKT-----------YEKILNA 218 (318)
T ss_dssp ----CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHH-----------HHHHHHC
T ss_pred ----ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-----HHH-----------HHHHHhC
Confidence 12356799999999999999999999999999999999999999975321 111 1111111
Q ss_pred cCCCCCHHHHHHHHHHHHhhcccCCCCCC-----CHHHHHH
Q 012213 419 RLSNTPLSEAMQVFFVAMLCVQEHGVERP-----TMREVVQ 454 (468)
Q Consensus 419 ~~~~~~~~~~~~~~~l~~~c~~~~P~~RP-----t~~ev~~ 454 (468)
.. ..+......+.+++..|++.||++|| +++|+++
T Consensus 219 ~~-~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 219 EL-RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp CC-CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred CC-CCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 11 11223345678899999999999999 8888874
No 99
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=3.3e-44 Score=350.49 Aligned_cols=250 Identities=22% Similarity=0.264 Sum_probs=198.1
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCC-CCCchhHHHHHHHHHhCC-CCCCccceeEEEecCCeeEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITK-GSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLL 257 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 257 (468)
.++|+..+.||+|+||+||+|.++ +|+.||||++..... .......+..|..++..+ +||||+++++++.+.+..++
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 467888899999999999999975 589999999864321 122335678899999887 79999999999999999999
Q ss_pred EEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccc
Q 012213 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQD 337 (468)
Q Consensus 258 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 337 (468)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 102 v~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKS--RRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 99999999999999643 34899999999999999999999887 99999999999999999999999999985432
Q ss_pred cCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcc
Q 012213 338 TGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILD 417 (468)
Q Consensus 338 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 417 (468)
........+||+.|+|||++.+..++.++|||||||++|||++|+.||...+.. +. ...+..
T Consensus 177 --~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-----~~-----------~~~i~~ 238 (353)
T 3txo_A 177 --NGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED-----DL-----------FEAILN 238 (353)
T ss_dssp -----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HH-----------HHHHHH
T ss_pred --CCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH-----HH-----------HHHHHc
Confidence 222345568999999999999888999999999999999999999999753211 11 111111
Q ss_pred ccCCCCCHHHHHHHHHHHHhhcccCCCCCCCH------HHHHH
Q 012213 418 QRLSNTPLSEAMQVFFVAMLCVQEHGVERPTM------REVVQ 454 (468)
Q Consensus 418 ~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~------~ev~~ 454 (468)
... ..+......+.+++..|++.||++||++ +|+++
T Consensus 239 ~~~-~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 239 DEV-VYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp CCC-CCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CCC-CCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 111 1222344567889999999999999998 67654
No 100
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.3e-43 Score=337.63 Aligned_cols=258 Identities=25% Similarity=0.368 Sum_probs=203.5
Q ss_pred hhccCCcc-eEcccCCcceEEEEc---CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeE
Q 012213 181 LECVKDNN-VIGRGGAGVVYRGVT---PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNL 256 (468)
Q Consensus 181 ~~~~~~~~-~ig~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 256 (468)
.+.|...+ .||+|+||+||+|.+ .+++.||||++..........+.+.+|+.+++.++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 34566666 999999999999954 3468899999876544444456799999999999999999999999 566789
Q ss_pred EEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccc
Q 012213 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQ 336 (468)
Q Consensus 257 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~ 336 (468)
+||||+++++|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 94 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 168 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALR 168 (291)
T ss_dssp EEEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEeCCCCCHHHHHHhC--cCCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCcceeec
Confidence 999999999999999753 34899999999999999999999887 9999999999999999999999999998765
Q ss_pred ccCCC-ccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhh
Q 012213 337 DTGAS-ECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVK 414 (468)
Q Consensus 337 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (468)
..... .......+++.|+|||.+.+..++.++||||||+++|||+| |+.||...... +....
T Consensus 169 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~----------- 232 (291)
T 1xbb_A 169 ADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-----EVTAM----------- 232 (291)
T ss_dssp TTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHHHH-----------
T ss_pred cCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH-----HHHHH-----------
Confidence 33221 11223446789999999988889999999999999999999 99999763311 11111
Q ss_pred hccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213 415 ILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ 460 (468)
Q Consensus 415 ~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 460 (468)
+........+......+.+++..|++.||++||++.|+++.|+++-
T Consensus 233 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 278 (291)
T 1xbb_A 233 LEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 278 (291)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred HHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 1111112223344567889999999999999999999999998763
No 101
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=5e-44 Score=347.22 Aligned_cols=261 Identities=24% Similarity=0.372 Sum_probs=209.3
Q ss_pred hhccCCcceEcccCCcceEEEEcCC------CcEEEEEEecccCCCCCchhHHHHHHHHHhCC-CCCCccceeEEEecCC
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPN------GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKE 253 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 253 (468)
.+.|+..+.||+|+||.||+|.+.. ...||+|.+.... .......+.+|+.+++.+ +||||+++++++...+
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA-HADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc-ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 4668888999999999999998743 2479999986432 222346688999999999 8999999999999999
Q ss_pred eeEEEEeccCCCChhhhcccCC------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC
Q 012213 254 TNLLVYEYMPNGSLGEVLHGKR------------GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321 (468)
Q Consensus 254 ~~~lv~e~~~~gsL~~~l~~~~------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 321 (468)
..++||||+++|+|.+++.... ...+++..++.++.||+.||+|||+.+ |+||||||+||+++.+
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNG 200 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCEEEGG
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEEECCC
Confidence 9999999999999999986432 235799999999999999999999887 9999999999999999
Q ss_pred CceEEeeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHH
Q 012213 322 FEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQW 400 (468)
Q Consensus 322 ~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~ 400 (468)
+.+||+|||++................+|+.|+|||.+.+..++.++||||||+++|||+| |..||.+..... .....
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~~~~ 279 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS-KFYKL 279 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH-HHHHH
T ss_pred CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH-HHHHH
Confidence 9999999999987654433333445567889999999988899999999999999999999 999997633211 11111
Q ss_pred HHHhhcccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213 401 TKMQTNSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ 460 (468)
Q Consensus 401 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 460 (468)
... ... ...+......+.+++..|++.||.+|||+.||++.|+++.
T Consensus 280 ~~~-----------~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 325 (333)
T 2i1m_A 280 VKD-----------GYQ---MAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325 (333)
T ss_dssp HHH-----------TCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred Hhc-----------CCC---CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence 110 000 1112223456788999999999999999999999998764
No 102
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-43 Score=342.73 Aligned_cols=259 Identities=30% Similarity=0.462 Sum_probs=201.4
Q ss_pred hhccCCcceEcccCCcceEEEEcCC-----CcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCee
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPN-----GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETN 255 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 255 (468)
.+.|+..+.||+|+||.||+|.+.. +..||||.+.... .......+.+|+.++++++||||+++++++...+..
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 121 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPM 121 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCc
Confidence 4567778999999999999998743 2359999986432 222335688999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccc
Q 012213 256 LLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYL 335 (468)
Q Consensus 256 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 335 (468)
++||||+++|+|.+++... ...+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 122 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 197 (333)
T 1mqb_A 122 MIITEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVL 197 (333)
T ss_dssp EEEEECCTTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred EEEEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchhh
Confidence 9999999999999999743 345899999999999999999999887 999999999999999999999999999876
Q ss_pred cccCCC-ccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchh
Q 012213 336 QDTGAS-ECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVV 413 (468)
Q Consensus 336 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (468)
...... .......+|+.|+|||.+.+..++.++||||||+++|||++ |+.||...... +.. .
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~-----~~~-----------~ 261 (333)
T 1mqb_A 198 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNH-----EVM-----------K 261 (333)
T ss_dssp -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHH-----------H
T ss_pred ccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHH-----HHH-----------H
Confidence 532211 11223346789999999998899999999999999999999 99999653211 111 1
Q ss_pred hhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213 414 KILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ 460 (468)
Q Consensus 414 ~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 460 (468)
.+.+......+......+.+++..||+.+|++||++.|+++.|+++.
T Consensus 262 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 308 (333)
T 1mqb_A 262 AINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI 308 (333)
T ss_dssp HHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred HHHCCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 11111111223344567889999999999999999999999998764
No 103
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=2.9e-43 Score=336.39 Aligned_cols=260 Identities=29% Similarity=0.408 Sum_probs=201.8
Q ss_pred hhccCCcceEcccCCcceEEEEcCCC----cEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEe-cCCee
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPNG----EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCS-NKETN 255 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~ 255 (468)
...|+..+.||+|+||+||+|.+.++ ..||+|.+.... .....+.+.+|+.++++++||||+++++++. ..+..
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 102 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP 102 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCC-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCC-CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCce
Confidence 34577789999999999999986432 358999886432 2223356889999999999999999999865 45577
Q ss_pred EEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccc
Q 012213 256 LLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYL 335 (468)
Q Consensus 256 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 335 (468)
++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 103 ~~v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~ 178 (298)
T 3f66_A 103 LVVLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDM 178 (298)
T ss_dssp EEEEECCTTCBHHHHHHC-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCCC
T ss_pred EEEEeCCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECcccccccc
Confidence 999999999999999974 3345899999999999999999999887 999999999999999999999999999876
Q ss_pred cccCC--CccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccch
Q 012213 336 QDTGA--SECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGV 412 (468)
Q Consensus 336 ~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (468)
..... ........+|+.|+|||.+.+..++.++||||||+++|||++ |.+||....... ...
T Consensus 179 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~--~~~------------- 243 (298)
T 3f66_A 179 YDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--ITV------------- 243 (298)
T ss_dssp SCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT--HHH-------------
T ss_pred cccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH--HHH-------------
Confidence 43221 122334567889999999999899999999999999999999 666665533211 111
Q ss_pred hhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccC
Q 012213 413 VKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQK 461 (468)
Q Consensus 413 ~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 461 (468)
..........+......+.+++..|++.+|++|||+.|++++|+++..
T Consensus 244 -~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 291 (298)
T 3f66_A 244 -YLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291 (298)
T ss_dssp -HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -HHhcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 111111111122334568889999999999999999999999998753
No 104
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.8e-43 Score=342.05 Aligned_cols=248 Identities=23% Similarity=0.337 Sum_probs=204.3
Q ss_pred cchhhhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCC------chhHHHHHHHHHhCCCCCCccceeEEE
Q 012213 177 SDDILECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSS------HDNGLSAEIRTLGKIRHRNIVRLKAFC 249 (468)
Q Consensus 177 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~------~~~~~~~e~~~l~~l~h~niv~l~~~~ 249 (468)
..++.+.|+..+.||+|+||+||+|.+ .+++.||||++........ ....+.+|+.++++++||||+++++++
T Consensus 19 ~~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~ 98 (335)
T 3dls_A 19 EGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIF 98 (335)
T ss_dssp TTHHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEE
T ss_pred CcccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 345678899999999999999999986 5688999999875433221 224578899999999999999999999
Q ss_pred ecCCeeEEEEeccCCC-ChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEee
Q 012213 250 SNKETNLLVYEYMPNG-SLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328 (468)
Q Consensus 250 ~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 328 (468)
.+.+..++||||+.+| +|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|
T Consensus 99 ~~~~~~~lv~e~~~~g~~l~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~D 173 (335)
T 3dls_A 99 ENQGFFQLVMEKHGSGLDLFAFIDRH--PRLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLID 173 (335)
T ss_dssp ECSSEEEEEEECCTTSCBHHHHHHTC--CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECC
T ss_pred eeCCEEEEEEEeCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEee
Confidence 9999999999999777 999998643 35899999999999999999999887 99999999999999999999999
Q ss_pred ccccccccccCCCccccccccCccccCccccCCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcc
Q 012213 329 FGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKV-DEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNS 407 (468)
Q Consensus 329 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 407 (468)
||++...... .......||+.|+|||++.+..+ +.++||||||+++|||++|+.||.....
T Consensus 174 fg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--------------- 235 (335)
T 3dls_A 174 FGSAAYLERG---KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE--------------- 235 (335)
T ss_dssp CTTCEECCTT---CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG---------------
T ss_pred cccceECCCC---CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH---------------
Confidence 9999876532 22344678999999999988776 7899999999999999999999965211
Q ss_pred cccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHH
Q 012213 408 SKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQM 455 (468)
Q Consensus 408 ~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~ 455 (468)
...... ..+......+.+++..|++.||++|||+.|+++.
T Consensus 236 -------~~~~~~-~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 236 -------TVEAAI-HPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -------GTTTCC-CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -------HHhhcc-CCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 1111234567889999999999999999999873
No 105
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=4.3e-43 Score=332.72 Aligned_cols=255 Identities=24% Similarity=0.311 Sum_probs=205.8
Q ss_pred hhhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEE
Q 012213 179 DILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLL 257 (468)
Q Consensus 179 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 257 (468)
.+.++|+..+.||+|+||.||+|.+. +++.||+|++............+.+|+.++++++||||+++++++.+....++
T Consensus 3 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 82 (284)
T 3kk8_A 3 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 82 (284)
T ss_dssp TTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEE
Confidence 44678899999999999999999874 58899999987554444444678899999999999999999999999999999
Q ss_pred EEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc---eEEeecccccc
Q 012213 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE---AHVADFGLAKY 334 (468)
Q Consensus 258 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfgla~~ 334 (468)
||||+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||++..
T Consensus 83 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~ 157 (284)
T 3kk8_A 83 VFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIE 157 (284)
T ss_dssp EECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceeeEE
Confidence 99999999999888643 35899999999999999999999887 999999999999987655 99999999976
Q ss_pred ccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhh
Q 012213 335 LQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVK 414 (468)
Q Consensus 335 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (468)
.... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||..... ...........
T Consensus 158 ~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-----~~~~~~~~~~~------ 223 (284)
T 3kk8_A 158 VNDS---EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-----HRLYAQIKAGA------ 223 (284)
T ss_dssp CCSS---CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHTC------
T ss_pred cccC---ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch-----hHHHHHHHhcc------
Confidence 5422 223456789999999999999999999999999999999999999965321 11111100000
Q ss_pred hccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 415 ILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 415 ~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.. ............+.+++..|++.||++|||+.|+++
T Consensus 224 -~~-~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 224 -YD-YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp -CC-CCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -cc-CCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 00 001111223456788999999999999999999987
No 106
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=1.4e-43 Score=335.81 Aligned_cols=252 Identities=23% Similarity=0.378 Sum_probs=206.5
Q ss_pred hhhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEec------
Q 012213 179 DILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSN------ 251 (468)
Q Consensus 179 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------ 251 (468)
.+...|+..+.||+|+||.||+|.+. +++.||+|++.... ..+.+|++++++++||||+++++++..
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (284)
T 2a19_B 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPE 81 (284)
T ss_dssp HHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--
T ss_pred hhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcc
Confidence 34577889999999999999999985 78999999986432 457899999999999999999998854
Q ss_pred ----------CCeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC
Q 012213 252 ----------KETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD 321 (468)
Q Consensus 252 ----------~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~ 321 (468)
....++||||+++|+|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+||+++.+
T Consensus 82 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~ 158 (284)
T 2a19_B 82 TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDT 158 (284)
T ss_dssp -------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEET
T ss_pred cccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCC
Confidence 345789999999999999997665567999999999999999999999887 9999999999999999
Q ss_pred CceEEeeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHH
Q 012213 322 FEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWT 401 (468)
Q Consensus 322 ~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~ 401 (468)
+.+||+|||++....... ......||+.|+|||.+.+..++.++||||||+++|||++|..|+... ..+.
T Consensus 159 ~~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-------~~~~ 228 (284)
T 2a19_B 159 KQVKIGDFGLVTSLKNDG---KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET-------SKFF 228 (284)
T ss_dssp TEEEECCCTTCEESSCCS---CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-------HHHH
T ss_pred CCEEECcchhheeccccc---cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH-------HHHH
Confidence 999999999998765322 223456899999999999989999999999999999999999886421 0111
Q ss_pred HHhhcccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCCC
Q 012213 402 KMQTNSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKPN 463 (468)
Q Consensus 402 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~~ 463 (468)
..+.+.... ......+.+++..|++.||++|||+.|+++.|+.+....
T Consensus 229 -----------~~~~~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~ 276 (284)
T 2a19_B 229 -----------TDLRDGIIS---DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP 276 (284)
T ss_dssp -----------HHHHTTCCC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC--
T ss_pred -----------HHhhccccc---ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCC
Confidence 111111111 122345678999999999999999999999999887554
No 107
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.8e-43 Score=367.99 Aligned_cols=249 Identities=25% Similarity=0.380 Sum_probs=198.8
Q ss_pred eEcccCCcceEEEEcC---CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEeccCCC
Q 012213 189 VIGRGGAGVVYRGVTP---NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNG 265 (468)
Q Consensus 189 ~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 265 (468)
.||+|+||.||+|.+. ++..||||+++.... ....+.+.+|+.++++++||||+++++++.. +..++||||+++|
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g 420 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTE-KADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGG 420 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCS-STTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCC
Confidence 7999999999999874 466799999875432 2334679999999999999999999999976 5689999999999
Q ss_pred ChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccCCC-ccc
Q 012213 266 SLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGAS-ECM 344 (468)
Q Consensus 266 sL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~-~~~ 344 (468)
+|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.+...... ...
T Consensus 421 ~L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 496 (613)
T 2ozo_A 421 PLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 496 (613)
T ss_dssp BHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC---------
T ss_pred cHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeec
Confidence 999999743 446899999999999999999999887 999999999999999999999999999876432211 112
Q ss_pred cccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccccCCCC
Q 012213 345 SAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQRLSNT 423 (468)
Q Consensus 345 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 423 (468)
....+++.|+|||++.+..++.++|||||||++|||+| |+.||...... .+... +........
T Consensus 497 ~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~~--------------i~~~~~~~~ 560 (613)
T 2ozo_A 497 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAF--------------IEQGKRMEC 560 (613)
T ss_dssp -----CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH--HHHHH--------------HHTTCCCCC
T ss_pred cCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHH--------------HHcCCCCCC
Confidence 23345689999999998999999999999999999998 99999764321 11111 111111223
Q ss_pred CHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhc
Q 012213 424 PLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQA 459 (468)
Q Consensus 424 ~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 459 (468)
+......+.+++..||+.+|++||++.+|++.|+.+
T Consensus 561 p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 596 (613)
T 2ozo_A 561 PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 596 (613)
T ss_dssp CTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 344567788999999999999999999999999875
No 108
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=3.2e-43 Score=336.62 Aligned_cols=269 Identities=27% Similarity=0.376 Sum_probs=207.2
Q ss_pred hhccCCcceEcccCCcceEEEEc-----CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecC--C
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-----PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNK--E 253 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~ 253 (468)
.+.|+..+.||+|+||.||+|.+ .+++.||||++..... ......+.+|+.+++.++||||+++++++... .
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 98 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG-GNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 98 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---C
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEeccccc-chhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCc
Confidence 45578889999999999999983 4688999999875432 33346789999999999999999999999876 5
Q ss_pred eeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q 012213 254 TNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAK 333 (468)
Q Consensus 254 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~ 333 (468)
..++||||+++|+|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.
T Consensus 99 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 99 GIKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp CEEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred eEEEEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECcccccc
Confidence 6799999999999999996432 45899999999999999999999887 9999999999999999999999999998
Q ss_pred cccccCCC-ccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcc-cc--
Q 012213 334 YLQDTGAS-ECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNS-SK-- 409 (468)
Q Consensus 334 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~-~~-- 409 (468)
........ .......||..|+|||.+.+..++.++||||||+++|||+||+.|+.... ..+....... ..
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~ 248 (302)
T 4e5w_A 175 AIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPM------ALFLKMIGPTHGQMT 248 (302)
T ss_dssp ECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH------HHHHHHHCSCCGGGH
T ss_pred cccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchh------hHHhhccCCcccccC
Confidence 76533221 22344568889999999998899999999999999999999999864310 0000000000 00
Q ss_pred -cc-hhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213 410 -EG-VVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ 460 (468)
Q Consensus 410 -~~-~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 460 (468)
.. ...+........+......+.+++..|++.||++|||+.|++++|+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 249 VTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 00 0111111112233345567889999999999999999999999999764
No 109
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2.3e-43 Score=344.57 Aligned_cols=251 Identities=24% Similarity=0.337 Sum_probs=188.6
Q ss_pred hhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213 180 ILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 180 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
+.+.|+..+.||+|+||.||+|.+. +++.||||++.... ..+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 126 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLV 126 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEE
Confidence 3567888999999999999999986 57889999986432 225588999999999999999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC---CCceEEeeccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS---DFEAHVADFGLAKYL 335 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfgla~~~ 335 (468)
|||+++|+|.+++... ..+++.++..++.||+.||.|||+.+ |+||||||+||+++. ++.+||+|||+++..
T Consensus 127 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~ 201 (349)
T 2w4o_A 127 LELVTGGELFDRIVEK--GYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV 201 (349)
T ss_dssp ECCCCSCBHHHHHTTC--SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC-----
T ss_pred EEeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCcccccc
Confidence 9999999999999643 45899999999999999999999887 999999999999975 889999999999865
Q ss_pred cccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhh
Q 012213 336 QDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKI 415 (468)
Q Consensus 336 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (468)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..+.... .... ..
T Consensus 202 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~~i~-~~~~----~~ 270 (349)
T 2w4o_A 202 EHQ---VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ---FMFRRIL-NCEY----YF 270 (349)
T ss_dssp --------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH---HHHHHHH-TTCC----CC
T ss_pred Ccc---cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH---HHHHHHH-hCCC----cc
Confidence 422 22345678999999999999999999999999999999999999997533211 0111110 0000 00
Q ss_pred ccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 416 LDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 416 ~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
...........+.+++.+|++.||++|||+.|+++
T Consensus 271 ----~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 271 ----ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp ----CTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ----CCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 01111234456788999999999999999999987
No 110
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.5e-43 Score=338.35 Aligned_cols=254 Identities=30% Similarity=0.500 Sum_probs=197.3
Q ss_pred hhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEe
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYE 260 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 260 (468)
.+.|+..+.||+|+||+||+|.+. ++.||||++.. ....+.+.+|+.++++++||||+++++++.+ ..++|||
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e 79 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIES----ESERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVME 79 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSS----TTHHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEE
T ss_pred HhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecC----hhHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEE
Confidence 456788899999999999999885 78899998753 2334678999999999999999999998864 4799999
Q ss_pred ccCCCChhhhcccCCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc-eEEeecccccccccc
Q 012213 261 YMPNGSLGEVLHGKRG-SFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE-AHVADFGLAKYLQDT 338 (468)
Q Consensus 261 ~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~-~kl~Dfgla~~~~~~ 338 (468)
|+++|+|.+++..... ..+++..++.++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||++......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~ 159 (307)
T 2eva_A 80 YAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH 159 (307)
T ss_dssp CCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------
T ss_pred cCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc
Confidence 9999999999975432 24789999999999999999999833244999999999999998887 799999999765421
Q ss_pred CCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccc
Q 012213 339 GASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQ 418 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 418 (468)
.....||+.|+|||++.+..++.++||||||+++|||+||+.||......... ..|... ..
T Consensus 160 -----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~-~~~~~~-------------~~ 220 (307)
T 2eva_A 160 -----MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR-IMWAVH-------------NG 220 (307)
T ss_dssp ----------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHH-HHHHHH-------------TT
T ss_pred -----cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHH-HHHHHh-------------cC
Confidence 22346899999999999999999999999999999999999999764322111 111110 00
Q ss_pred cCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213 419 RLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ 460 (468)
Q Consensus 419 ~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 460 (468)
............+.+++.+|++.||++|||+.|+++.|+.+.
T Consensus 221 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 262 (307)
T 2eva_A 221 TRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 262 (307)
T ss_dssp CCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHG
T ss_pred CCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 111112233456788999999999999999999999998764
No 111
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-43 Score=335.33 Aligned_cols=257 Identities=25% Similarity=0.365 Sum_probs=205.4
Q ss_pred hccCCcc-eEcccCCcceEEEEcC---CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEE
Q 012213 182 ECVKDNN-VIGRGGAGVVYRGVTP---NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLL 257 (468)
Q Consensus 182 ~~~~~~~-~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 257 (468)
++|...+ .||+|+||.||+|.+. ++..||||++.... .....+.+.+|++++++++||||+++++++ ..+..++
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l 86 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML 86 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCcc-chhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence 3445544 8999999999999863 57789999986532 223346788999999999999999999999 4566899
Q ss_pred EEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccc
Q 012213 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQD 337 (468)
Q Consensus 258 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 337 (468)
||||+++++|.+++... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 87 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~ 162 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGA 162 (287)
T ss_dssp EEECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred EEEeCCCCCHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeeecc
Confidence 99999999999999643 345899999999999999999999887 99999999999999999999999999987653
Q ss_pred cCCC-ccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhhh
Q 012213 338 TGAS-ECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKI 415 (468)
Q Consensus 338 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (468)
.... .......+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...... ..... +
T Consensus 163 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~--------------i 226 (287)
T 1u59_A 163 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAF--------------I 226 (287)
T ss_dssp CSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HHHHH--------------H
T ss_pred CcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--HHHHH--------------H
Confidence 2221 11233456889999999988889999999999999999999 99999763321 11111 1
Q ss_pred ccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213 416 LDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ 460 (468)
Q Consensus 416 ~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 460 (468)
........+......+.+++..|++.+|++||++.|+++.|+.+.
T Consensus 227 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 271 (287)
T 1u59_A 227 EQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 271 (287)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred hcCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 111112223345567889999999999999999999999998774
No 112
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=5.6e-43 Score=340.97 Aligned_cols=251 Identities=24% Similarity=0.279 Sum_probs=200.3
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCC-CchhHHHHHHHHHhCC-CCCCccceeEEEecCCeeEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGS-SHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLL 257 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 257 (468)
.++|+..+.||+|+||.||+|.++ +++.||+|++....... .....+..|+.++.++ +||||+++++++.+.+..++
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 567888899999999999999985 58899999997543322 2235578899999887 89999999999999999999
Q ss_pred EEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccc
Q 012213 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQD 337 (468)
Q Consensus 258 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 337 (468)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 88 v~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~ 162 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 162 (345)
T ss_dssp EECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred EEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence 99999999999998643 35899999999999999999999887 99999999999999999999999999986432
Q ss_pred cCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCc---CHHHHHHHhhcccccchhh
Q 012213 338 TGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGL---DIVQWTKMQTNSSKEGVVK 414 (468)
Q Consensus 338 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 414 (468)
. ........||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...... ...
T Consensus 163 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~----------~~~ 230 (345)
T 3a8x_A 163 P--GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYL----------FQV 230 (345)
T ss_dssp T--TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHH----------HHH
T ss_pred C--CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHH----------HHH
Confidence 2 2234556899999999999999999999999999999999999999975321110 000000 011
Q ss_pred hccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCH
Q 012213 415 ILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTM 449 (468)
Q Consensus 415 ~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~ 449 (468)
+... ....+......+.+++.+|++.||++||++
T Consensus 231 i~~~-~~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 231 ILEK-QIRIPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp HHHC-CCCCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred HHcC-CCCCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 1111 112233345677889999999999999995
No 113
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=9.5e-44 Score=342.47 Aligned_cols=263 Identities=26% Similarity=0.398 Sum_probs=209.8
Q ss_pred hhccCCcceEcccCCcceEEEEc------CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCC-CCCCccceeEEEecCC
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT------PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKE 253 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 253 (468)
.+.|+..+.||+|+||+||+|.+ .+++.||||++..... ......+.+|+.++.++ +||||+++++++...+
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 104 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 104 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCC-cHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCC
Confidence 56788899999999999999974 3568899999864322 22235688999999999 7999999999987755
Q ss_pred -eeEEEEeccCCCChhhhcccCCCC--------------CCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEE
Q 012213 254 -TNLLVYEYMPNGSLGEVLHGKRGS--------------FLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL 318 (468)
Q Consensus 254 -~~~lv~e~~~~gsL~~~l~~~~~~--------------~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill 318 (468)
..++||||+++|+|.+++...... .+++..+..++.|++.||.|||+.+ |+||||||+||++
T Consensus 105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~ 181 (316)
T 2xir_A 105 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILL 181 (316)
T ss_dssp SCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred CceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEE
Confidence 489999999999999999754421 2889999999999999999999887 9999999999999
Q ss_pred cCCCceEEeeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCH
Q 012213 319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDI 397 (468)
Q Consensus 319 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~ 397 (468)
+.++.+||+|||+++...............+|+.|+|||.+.+..++.++||||||+++|||+| |+.||....... ..
T Consensus 182 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~-~~ 260 (316)
T 2xir_A 182 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EF 260 (316)
T ss_dssp CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH-HH
T ss_pred CCCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH-HH
Confidence 9999999999999987654333333445567899999999999899999999999999999998 999997633211 01
Q ss_pred HHHHHHhhcccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCC
Q 012213 398 VQWTKMQTNSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKP 462 (468)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~ 462 (468)
. .. +........+......+.+++..|++.||++|||+.|+++.|+.+...
T Consensus 261 ~---~~-----------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 311 (316)
T 2xir_A 261 C---RR-----------LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 311 (316)
T ss_dssp H---HH-----------HHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred H---HH-----------hccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhh
Confidence 1 00 000111112223445688899999999999999999999999987543
No 114
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=3.4e-43 Score=343.08 Aligned_cols=247 Identities=21% Similarity=0.229 Sum_probs=203.9
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCC-CCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITK-GSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
.+.|+..+.||+|+||.||+|.+. +|+.||||++..... .......+.+|+.+++.++||||+++++++.+....++|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 567888899999999999999985 689999999864321 223346688999999999999999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 120 ~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~ 194 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194 (350)
T ss_dssp EECCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred EcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceeccCC
Confidence 9999999999999743 34899999999999999999999887 999999999999999999999999999876421
Q ss_pred CCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccc
Q 012213 339 GASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQ 418 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 418 (468)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+.. ..+...
T Consensus 195 -----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~-----------~~i~~~ 253 (350)
T 1rdq_E 195 -----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP-----IQIY-----------EKIVSG 253 (350)
T ss_dssp -----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHH-----------HHHHHC
T ss_pred -----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH-----HHHH-----------HHHHcC
Confidence 2346799999999999999999999999999999999999999975321 1111 111111
Q ss_pred cCCCCCHHHHHHHHHHHHhhcccCCCCCCC-----HHHHHH
Q 012213 419 RLSNTPLSEAMQVFFVAMLCVQEHGVERPT-----MREVVQ 454 (468)
Q Consensus 419 ~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt-----~~ev~~ 454 (468)
.. ..+......+.+++..|++.||++||+ ++||++
T Consensus 254 ~~-~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 254 KV-RFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp CC-CCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred CC-CCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 11 122234566788999999999999998 888865
No 115
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=6e-44 Score=344.43 Aligned_cols=268 Identities=28% Similarity=0.404 Sum_probs=205.6
Q ss_pred cCCcceEcccCCcceEEEEc-----CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecC--CeeE
Q 012213 184 VKDNNVIGRGGAGVVYRGVT-----PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNK--ETNL 256 (468)
Q Consensus 184 ~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 256 (468)
|+..+.||+|+||+||++.+ .+++.||||++.... .......+.+|++++++++||||+++++++.+. ...+
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 111 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADA-GPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQ 111 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEecccc-ChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEE
Confidence 47889999999999998864 268899999986432 223345689999999999999999999999874 5678
Q ss_pred EEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccc
Q 012213 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQ 336 (468)
Q Consensus 257 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~ 336 (468)
+||||+++|+|.+++.... +++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 112 lv~e~~~~~~L~~~l~~~~---~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~ 185 (318)
T 3lxp_A 112 LVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 185 (318)
T ss_dssp EEECCCTTCBHHHHGGGSC---CCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECC
T ss_pred EEEecccCCcHHHHHhhCC---CCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCcccccccc
Confidence 9999999999999996543 899999999999999999999887 9999999999999999999999999998775
Q ss_pred ccCCC-ccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhh
Q 012213 337 DTGAS-ECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKI 415 (468)
Q Consensus 337 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (468)
..... .......+|..|+|||.+.+..++.++||||||+++|||+||+.||............+...... .....+.
T Consensus 186 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 263 (318)
T 3lxp_A 186 EGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMT--VLRLTEL 263 (318)
T ss_dssp TTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHH--HHHHHHH
T ss_pred ccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchh--HHHHHHH
Confidence 33221 12334567888999999998889999999999999999999999986421100000000000000 0011111
Q ss_pred cccc-CCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213 416 LDQR-LSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ 460 (468)
Q Consensus 416 ~d~~-~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 460 (468)
++.. ....+......+.+++..||+.||++|||+.|+++.|+++.
T Consensus 264 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~ 309 (318)
T 3lxp_A 264 LERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVH 309 (318)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 1111 12233445677889999999999999999999999998774
No 116
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.7e-43 Score=334.19 Aligned_cols=257 Identities=27% Similarity=0.383 Sum_probs=201.8
Q ss_pred ccCCcceEcccCCcceEEEEcCC----CcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCee-EE
Q 012213 183 CVKDNNVIGRGGAGVVYRGVTPN----GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETN-LL 257 (468)
Q Consensus 183 ~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~-~l 257 (468)
.|...+.||+|+||+||+|.+.+ +..||+|.+..... ....+.+.+|+.++++++||||+++++++.+.+.. ++
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 100 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITE-MQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV 100 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCS-HHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeecccccc-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEE
Confidence 35566899999999999998632 23699999864322 22336788999999999999999999999876665 99
Q ss_pred EEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccc
Q 012213 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQD 337 (468)
Q Consensus 258 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 337 (468)
||||+.+|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 101 v~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~ 176 (298)
T 3pls_A 101 LLPYMCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILD 176 (298)
T ss_dssp EECCCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTTTT
T ss_pred EEecccCCCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCcccccC
Confidence 9999999999999974 3456899999999999999999999887 99999999999999999999999999986543
Q ss_pred cC--CCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCC-CCCCCCCCcCHHHHHHHhhcccccchhh
Q 012213 338 TG--ASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRP-VGDFGEEGLDIVQWTKMQTNSSKEGVVK 414 (468)
Q Consensus 338 ~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (468)
.. .........+++.|+|||...+..++.++||||||+++|||++|..| |..... .......
T Consensus 177 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~--~~~~~~~------------- 241 (298)
T 3pls_A 177 REYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDP--FDLTHFL------------- 241 (298)
T ss_dssp GGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCG--GGHHHHH-------------
T ss_pred CcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCH--HHHHHHh-------------
Confidence 22 11223345678999999999999999999999999999999995555 433221 1111111
Q ss_pred hccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213 415 ILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ 460 (468)
Q Consensus 415 ~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 460 (468)
........+......+.+++..|++.||.+|||++|+++.|+++.
T Consensus 242 -~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 286 (298)
T 3pls_A 242 -AQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIV 286 (298)
T ss_dssp -HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -hcCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 111111222334457888999999999999999999999998874
No 117
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=3.1e-43 Score=343.33 Aligned_cols=270 Identities=16% Similarity=0.181 Sum_probs=201.1
Q ss_pred hhccCCcceEcccCCcceEEEEcC----CCcEEEEEEecccCCCCC---------chhHHHHHHHHHhCCCCCCccceeE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP----NGEQVAVKKLLGITKGSS---------HDNGLSAEIRTLGKIRHRNIVRLKA 247 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~---------~~~~~~~e~~~l~~l~h~niv~l~~ 247 (468)
.++|...+.||+|+||.||+|.+. ++..||||++........ ....+.+|+..+..++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 457888999999999999999985 578899998864322100 1134667888999999999999999
Q ss_pred EEec----CCeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC-
Q 012213 248 FCSN----KETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF- 322 (468)
Q Consensus 248 ~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~- 322 (468)
++.. ....++||||+ +++|.+++.... .+++..++.++.||+.||+|||+.+ |+||||||+||+++.++
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~ 189 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNP 189 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESSST
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccCCC
Confidence 9987 67889999999 999999997543 6899999999999999999999887 99999999999999887
Q ss_pred -ceEEeeccccccccccCCC-----ccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcC
Q 012213 323 -EAHVADFGLAKYLQDTGAS-----ECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLD 396 (468)
Q Consensus 323 -~~kl~Dfgla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~ 396 (468)
.+||+|||+++.+...... .......||+.|+|||++.+..++.++||||||+++|||+||+.||.........
T Consensus 190 ~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~ 269 (345)
T 2v62_A 190 DQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVA 269 (345)
T ss_dssp TSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHH
T ss_pred CcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHH
Confidence 9999999999876532211 1124557999999999999989999999999999999999999999642211111
Q ss_pred HHHHHHHhhcccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCC
Q 012213 397 IVQWTKMQTNSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKP 462 (468)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~ 462 (468)
................... .. .......+.+++..||+.||++||++++|++.|+++..+
T Consensus 270 ~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 329 (345)
T 2v62_A 270 VQTAKTNLLDELPQSVLKW----AP--SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIP 329 (345)
T ss_dssp HHHHHHHHHHTTTHHHHHH----SC--TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCC
T ss_pred HHHHHHhhcccccHHHHhh----cc--ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCc
Confidence 1111111111110001100 00 012345688899999999999999999999999987643
No 118
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=8.2e-44 Score=346.41 Aligned_cols=249 Identities=24% Similarity=0.279 Sum_probs=201.3
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCC-CCCchhHHHHHHHHHhCC-CCCCccceeEEEecCCeeEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITK-GSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLL 257 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 257 (468)
.++|+..+.||+|+||.||+|.++ +|+.||||++..... .......+..|..++..+ +||||+++++++.+.+..++
T Consensus 16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~l 95 (345)
T 1xjd_A 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFF 95 (345)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEE
Confidence 567888899999999999999985 588999999865321 122335678889888876 89999999999999999999
Q ss_pred EEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccc
Q 012213 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQD 337 (468)
Q Consensus 258 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 337 (468)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 96 v~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 170 (345)
T 1xjd_A 96 VMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENML 170 (345)
T ss_dssp EEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence 99999999999999643 34899999999999999999999887 99999999999999999999999999986432
Q ss_pred cCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcc
Q 012213 338 TGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILD 417 (468)
Q Consensus 338 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 417 (468)
. .......+||+.|+|||++.+..++.++|||||||++|||++|+.||...+. ...... +..
T Consensus 171 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~~-----------i~~ 232 (345)
T 1xjd_A 171 G--DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE-----EELFHS-----------IRM 232 (345)
T ss_dssp T--TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH-----------HHH
T ss_pred C--CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH-----HHHHHH-----------HHh
Confidence 1 2224567899999999999999999999999999999999999999975321 111110 100
Q ss_pred ccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHH-HHH
Q 012213 418 QRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMR-EVV 453 (468)
Q Consensus 418 ~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~-ev~ 453 (468)
.. ...+......+.+++.+|++.||++||++. |++
T Consensus 233 ~~-~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 233 DN-PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp CC-CCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred CC-CCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 00 112223445678899999999999999997 654
No 119
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.7e-43 Score=334.58 Aligned_cols=252 Identities=29% Similarity=0.413 Sum_probs=199.9
Q ss_pred hhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecC-CeeEEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNK-ETNLLVY 259 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-~~~~lv~ 259 (468)
.+.|+..+.||+|+||+||+|.+. |+.||||.+... ...+.+.+|+.++++++||||+++++++.+. +..++||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 94 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC----C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecch----hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEE
Confidence 567888999999999999999874 889999998532 2336789999999999999999999997654 4689999
Q ss_pred eccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccC
Q 012213 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTG 339 (468)
Q Consensus 260 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 339 (468)
||+++|+|.+++.......+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 95 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~- 170 (278)
T 1byg_A 95 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST- 170 (278)
T ss_dssp CCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred ecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeecccccccccc-
Confidence 9999999999997544344889999999999999999999887 999999999999999999999999999765422
Q ss_pred CCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccc
Q 012213 340 ASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQ 418 (468)
Q Consensus 340 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 418 (468)
.....+++.|+|||.+.+..++.++||||||+++|||+| |+.||...... ... ..+...
T Consensus 171 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~~~--------------~~~~~~ 230 (278)
T 1byg_A 171 ----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVV--------------PRVEKG 230 (278)
T ss_dssp ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG--GHH--------------HHHTTT
T ss_pred ----ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--HHH--------------HHHhcC
Confidence 123357889999999998899999999999999999998 99999763321 111 111111
Q ss_pred cCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccC
Q 012213 419 RLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQK 461 (468)
Q Consensus 419 ~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 461 (468)
.....+......+.+++..|++.||++|||+.|+++.|++++.
T Consensus 231 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 231 YKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 1112233445678889999999999999999999999998864
No 120
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=7.3e-43 Score=353.02 Aligned_cols=249 Identities=27% Similarity=0.382 Sum_probs=204.4
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCC-CCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITK-GSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
...|...+.||+|+||.||+|.+. +|+.||||++..... .......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 456888899999999999999985 789999999864321 122335789999999999999999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 95 ~E~~~gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~ 169 (476)
T 2y94_A 95 MEYVSGGELFDYICK--NGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 169 (476)
T ss_dssp EECCSSEEHHHHTTS--SSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEECCTT
T ss_pred EeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhcccc
Confidence 999999999999964 345899999999999999999999877 999999999999999999999999999876432
Q ss_pred CCCccccccccCccccCccccCCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcc
Q 012213 339 GASECMSAVAGSYGYIAPEYAYTLKV-DEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILD 417 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 417 (468)
.......||+.|+|||++.+..+ +.++|||||||++|||++|+.||.+.... .. ..++.+
T Consensus 170 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~-----~~-----------~~~i~~ 230 (476)
T 2y94_A 170 ---EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP-----TL-----------FKKICD 230 (476)
T ss_dssp ---CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH-----HH-----------HHHHHT
T ss_pred ---ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH-----HH-----------HHHHhc
Confidence 22345679999999999988765 68999999999999999999999753211 11 111111
Q ss_pred ccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 418 QRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 418 ~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
... ..+......+.+++..|++.||++|||+.|+++
T Consensus 231 ~~~-~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 231 GIF-YTPQYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp TCC-CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCc-CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 111 112223456788999999999999999999997
No 121
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=2.5e-43 Score=333.95 Aligned_cols=257 Identities=25% Similarity=0.354 Sum_probs=202.7
Q ss_pred hhccCCcceEcccCCcceEEEEcCC----CcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPN----GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNL 256 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 256 (468)
.++|+..+.||+|+||+||+|.+.+ +..||||.+.... .....+.+.+|+.+++.++||||+++++++.+ +..+
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 88 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC-TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW 88 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS-CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc-CchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence 5678888999999999999998643 3359999886432 22234678999999999999999999999865 4568
Q ss_pred EEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccc
Q 012213 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQ 336 (468)
Q Consensus 257 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~ 336 (468)
+||||+++++|.+++... ...+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 89 ~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 164 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIE 164 (281)
T ss_dssp EEEECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGCC-
T ss_pred EEEecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCcccc
Confidence 999999999999999643 345899999999999999999999887 9999999999999999999999999998765
Q ss_pred ccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhhh
Q 012213 337 DTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKI 415 (468)
Q Consensus 337 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (468)
... ........+++.|+|||...+..++.++||||||+++|||+| |+.||...... .......
T Consensus 165 ~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~--~~~~~~~------------- 228 (281)
T 3cc6_A 165 DED-YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK--DVIGVLE------------- 228 (281)
T ss_dssp ---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG--GHHHHHH-------------
T ss_pred ccc-ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH--HHHHHHh-------------
Confidence 322 222334557889999999998899999999999999999998 99999753321 1111111
Q ss_pred ccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213 416 LDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ 460 (468)
Q Consensus 416 ~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 460 (468)
.......+......+.+++..|++.||++|||+.|+++.|+++.
T Consensus 229 -~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 229 -KGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp -HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -cCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence 11111122234466888999999999999999999999999874
No 122
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=6.4e-43 Score=343.82 Aligned_cols=251 Identities=13% Similarity=0.129 Sum_probs=203.8
Q ss_pred hhccCCcceEcccCCcceEEEE------cCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCC---CCCccceeEEEec
Q 012213 181 LECVKDNNVIGRGGAGVVYRGV------TPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIR---HRNIVRLKAFCSN 251 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~ 251 (468)
.+.|...+.||+|+||+||+|. ..+++.||||++... ...++..|+.++..++ |+|++++++++..
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-----ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 4668888999999999999994 356889999998532 2356788888888886 8999999999999
Q ss_pred CCeeEEEEeccCCCChhhhcccC---CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC--------
Q 012213 252 KETNLLVYEYMPNGSLGEVLHGK---RGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS-------- 320 (468)
Q Consensus 252 ~~~~~lv~e~~~~gsL~~~l~~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~-------- 320 (468)
.+..++||||+++|+|.+++... ....+++..+..++.||+.||+|||+.+ |+||||||+|||++.
T Consensus 139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~~~ 215 (365)
T 3e7e_A 139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQDDE 215 (365)
T ss_dssp SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC---
T ss_pred CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCcccc
Confidence 99999999999999999999632 3446999999999999999999999877 999999999999998
Q ss_pred ---CCceEEeeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCH
Q 012213 321 ---DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDI 397 (468)
Q Consensus 321 ---~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~ 397 (468)
++.+||+|||+++.+.............||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 216 ~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~--- 292 (365)
T 3e7e_A 216 DDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE--- 292 (365)
T ss_dssp ---CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE---
T ss_pred ccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc---
Confidence 89999999999987654444445566789999999999999999999999999999999999999985422110
Q ss_pred HHHHHHhhcccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCC-CCHHHHHHHHHhcc
Q 012213 398 VQWTKMQTNSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVER-PTMREVVQMLAQAQ 460 (468)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~R-Pt~~ev~~~L~~~~ 460 (468)
.. ++..+...+ ....+.+++..|++.+|.+| |+++++.+.|+++.
T Consensus 293 ------------~~----~~~~~~~~~--~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l 338 (365)
T 3e7e_A 293 ------------CK----PEGLFRRLP--HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVF 338 (365)
T ss_dssp ------------EE----ECSCCTTCS--SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHH
T ss_pred ------------ee----echhccccC--cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHH
Confidence 01 111111111 23455678889999999999 68888888887763
No 123
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=4.1e-43 Score=339.87 Aligned_cols=250 Identities=26% Similarity=0.329 Sum_probs=194.0
Q ss_pred hhccCCcceEcccCCcceEEEEc----CCCcEEEEEEecccCC--CCCchhHHHHHHHHHhCCCCCCccceeEEEecCCe
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT----PNGEQVAVKKLLGITK--GSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKET 254 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 254 (468)
.+.|+..+.||+|+||.||++.. .+++.||+|++..... .......+.+|+.+++.++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 56788899999999999999987 4789999999875432 12223557889999999999999999999999999
Q ss_pred eEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q 012213 255 NLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKY 334 (468)
Q Consensus 255 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 334 (468)
.++||||+++|+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred EEEEEeCCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 99999999999999999643 34889999999999999999999887 99999999999999999999999999976
Q ss_pred ccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhh
Q 012213 335 LQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVK 414 (468)
Q Consensus 335 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (468)
..... .......||+.|+|||++.+..++.++||||||+++|||++|+.||..... .... ..
T Consensus 171 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~-----------~~ 232 (327)
T 3a62_A 171 SIHDG--TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR-----KKTI-----------DK 232 (327)
T ss_dssp ----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHH-----------HH
T ss_pred cccCC--ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH-----HHHH-----------HH
Confidence 43221 223456799999999999998999999999999999999999999975321 1111 11
Q ss_pred hccccCCCCCHHHHHHHHHHHHhhcccCCCCCC-----CHHHHHH
Q 012213 415 ILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERP-----TMREVVQ 454 (468)
Q Consensus 415 ~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RP-----t~~ev~~ 454 (468)
+..... ..+......+.+++.+|++.||++|| ++.|+++
T Consensus 233 i~~~~~-~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 233 ILKCKL-NLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp HHHTCC-CCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred HHhCCC-CCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 111111 12223346678899999999999999 7778765
No 124
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=8.3e-43 Score=335.13 Aligned_cols=266 Identities=20% Similarity=0.290 Sum_probs=201.7
Q ss_pred hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCC-CCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKG-SSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
..+|+..+.||+|+||.||+|.+ .+|+.||||++...... ......+.+|+.++++++||||+++++++...+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 56788899999999999999987 57899999998753322 22345688999999999999999999999999999999
Q ss_pred EeccCCCChhhhccc--CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccc
Q 012213 259 YEYMPNGSLGEVLHG--KRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQ 336 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~ 336 (468)
|||+++|+|.+++.. .....+++..++.++.+++.||.|||+.+ ++||||||+||+++.++.+||+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999999864 23446899999999999999999999887 9999999999999999999999999998764
Q ss_pred ccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhc
Q 012213 337 DTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKIL 416 (468)
Q Consensus 337 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (468)
... .......|++.|+|||.+.+..++.++||||||+++|||++|+.||..... ....+.......
T Consensus 188 ~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~--------- 253 (310)
T 2wqm_A 188 SKT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLYSLCKKIEQC--------- 253 (310)
T ss_dssp -------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C---CHHHHHHHHHTT---------
T ss_pred CCC--ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch---hHHHHHHHhhcc---------
Confidence 322 122345689999999999999999999999999999999999999975321 222222211111
Q ss_pred cccCCC-CCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCCCCc
Q 012213 417 DQRLSN-TPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKPNTF 465 (468)
Q Consensus 417 d~~~~~-~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~~~~ 465 (468)
.... ........+.+++..|++.||++|||+.||++.|+++.+..+.
T Consensus 254 --~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 254 --DYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp --CSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred --cCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 1111 1123345688899999999999999999999999998765543
No 125
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=3.1e-43 Score=334.02 Aligned_cols=248 Identities=19% Similarity=0.314 Sum_probs=202.0
Q ss_pred hhhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCC-CCCCccceeEEEecCCeeE
Q 012213 179 DILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKETNL 256 (468)
Q Consensus 179 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 256 (468)
.+.+.|+..+.||+|+||+||+|.+. +++.||||++............+.+|+..+..+ +||||+++++++.+.+..+
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~ 87 (289)
T 1x8b_A 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHML 87 (289)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEE
T ss_pred cccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE
Confidence 34677889999999999999999985 789999999876544444556788999999998 9999999999999999999
Q ss_pred EEEeccCCCChhhhcccCC--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC--------------
Q 012213 257 LVYEYMPNGSLGEVLHGKR--GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS-------------- 320 (468)
Q Consensus 257 lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~-------------- 320 (468)
+||||+++|+|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.
T Consensus 88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~ 164 (289)
T 1x8b_A 88 IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDED 164 (289)
T ss_dssp EEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC---------------
T ss_pred EEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCcccccccccc
Confidence 9999999999999997532 245899999999999999999999887 999999999999984
Q ss_pred -----CCceEEeeccccccccccCCCccccccccCccccCccccCCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCC
Q 012213 321 -----DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTL-KVDEKSDVYSFGVVLLELITGRRPVGDFGEEG 394 (468)
Q Consensus 321 -----~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~ 394 (468)
...+||+|||.+...... ....||+.|+|||.+.+. .++.++||||||+++|||++|.+|+....
T Consensus 165 ~~~~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~--- 235 (289)
T 1x8b_A 165 DWASNKVMFKIGDLGHVTRISSP------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD--- 235 (289)
T ss_dssp -----CCCEEECCCTTCEETTCS------CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH---
T ss_pred cccCCceEEEEcccccccccCCc------cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh---
Confidence 447999999999876432 223589999999998765 56689999999999999999998764311
Q ss_pred cCHHHHHHHhhcccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 395 LDIVQWTKMQTNSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.|.. +........+......+.+++..|++.||++|||+.|+++
T Consensus 236 ----~~~~------------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 236 ----QWHE------------IRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp ----HHHH------------HHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----HHHH------------HHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 1111 1111222222334567888999999999999999999976
No 126
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=6.4e-43 Score=330.53 Aligned_cols=251 Identities=24% Similarity=0.362 Sum_probs=184.1
Q ss_pred hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCC-CCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITK-GSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
.+.|+..+.||+|+||.||+|.+ .+|+.||||.+..... .......+.+|+.++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 56788899999999999999997 5789999999854321 122236789999999999999999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
|||+++++|.+++... ...+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 90 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNR-VKPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EECCTTEEHHHHHHTC-SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EecCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 9999999999999743 346899999999999999999999887 999999999999999999999999999876422
Q ss_pred CCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccc
Q 012213 339 GASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQ 418 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 418 (468)
. .......||+.|+|||.+.+..++.++||||||+++|||++|+.||....... ........
T Consensus 166 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----------------~~~~~~~~ 227 (278)
T 3cok_A 166 H--EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN----------------TLNKVVLA 227 (278)
T ss_dssp ----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------------------CCSS
T ss_pred C--CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH----------------HHHHHhhc
Confidence 2 12234568999999999998889999999999999999999999997633111 00111111
Q ss_pred cCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 419 RLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 419 ~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
. ...+......+.+++.+|++.||++|||++|+++
T Consensus 228 ~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 228 D-YEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp C-CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred c-cCCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 1 1112233456788999999999999999999986
No 127
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-42 Score=345.84 Aligned_cols=274 Identities=22% Similarity=0.277 Sum_probs=212.9
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCC--eeEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKE--TNLL 257 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~l 257 (468)
.+.|...+.||+|+||+||+|.+. +|+.||||++..... ....+.+.+|++++++++||||+++++++.... ..++
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~l 86 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVL 86 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEE
Confidence 467888999999999999999985 489999999875332 222466789999999999999999999998765 6799
Q ss_pred EEeccCCCChhhhcccCCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEE----cCCCceEEeecccc
Q 012213 258 VYEYMPNGSLGEVLHGKRG-SFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL----NSDFEAHVADFGLA 332 (468)
Q Consensus 258 v~e~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~Dfgla 332 (468)
||||+++|+|.+++..... ..+++..++.++.||+.||+|||+.+ |+||||||+||++ +.++.+||+|||++
T Consensus 87 v~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a 163 (396)
T 4eut_A 87 IMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (396)
T ss_dssp EECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred EEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence 9999999999999975432 24899999999999999999999887 9999999999999 77888999999999
Q ss_pred ccccccCCCccccccccCccccCccccCC--------CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHh
Q 012213 333 KYLQDTGASECMSAVAGSYGYIAPEYAYT--------LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQ 404 (468)
Q Consensus 333 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 404 (468)
+..... .......||+.|+|||++.+ ..++.++|||||||++|||+||+.||.................
T Consensus 164 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~ 240 (396)
T 4eut_A 164 RELEDD---EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240 (396)
T ss_dssp EECCCG---GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHH
T ss_pred eEccCC---CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHh
Confidence 876432 22345679999999998764 4678899999999999999999999976433222222222211
Q ss_pred hcccccch---hhhcc------ccC---CCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccC
Q 012213 405 TNSSKEGV---VKILD------QRL---SNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQK 461 (468)
Q Consensus 405 ~~~~~~~~---~~~~d------~~~---~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 461 (468)
.......+ ....+ ..+ ..........+.+++..|++.||++||++.|+++.++++-.
T Consensus 241 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~ 309 (396)
T 4eut_A 241 TGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILH 309 (396)
T ss_dssp HSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHT
T ss_pred cCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhh
Confidence 11110000 00000 011 22346677888899999999999999999999999988754
No 128
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=7.9e-43 Score=342.31 Aligned_cols=251 Identities=25% Similarity=0.284 Sum_probs=192.5
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 259 (468)
.++|+..+.||+|+||+||++.+. +++.||||++..... ..+.+.+|+..++.++||||+++++++.+.+..++||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 95 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA---IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIM 95 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT---SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc---ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEE
Confidence 567888999999999999999985 789999999864322 2266889999999999999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc--eEEeeccccccccc
Q 012213 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE--AHVADFGLAKYLQD 337 (468)
Q Consensus 260 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--~kl~Dfgla~~~~~ 337 (468)
||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||+++....
T Consensus 96 e~~~~~~L~~~l~~~--~~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~ 170 (361)
T 3uc3_A 96 EYASGGELYERICNA--GRFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 170 (361)
T ss_dssp ECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred EeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence 999999999998643 34899999999999999999999887 999999999999988765 99999999975432
Q ss_pred cCCCccccccccCccccCccccCCCCCCcc-hhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhc
Q 012213 338 TGASECMSAVAGSYGYIAPEYAYTLKVDEK-SDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKIL 416 (468)
Q Consensus 338 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (468)
........||+.|+|||++.+..++.+ +|||||||++|||++|+.||....... ....... .+.
T Consensus 171 ---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~~~~-----------~~~ 235 (361)
T 3uc3_A 171 ---HSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR-DYRKTIQ-----------RIL 235 (361)
T ss_dssp -------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC-CHHHHHH-----------HHH
T ss_pred ---cCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH-HHHHHHH-----------HHh
Confidence 122344579999999999988777665 899999999999999999997643211 1111111 111
Q ss_pred cccC-CCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 417 DQRL-SNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 417 d~~~-~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.... ..........+.+++.+|++.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 236 SVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp TTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred cCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence 1111 0111123456788999999999999999999987
No 129
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=5.6e-43 Score=338.95 Aligned_cols=258 Identities=19% Similarity=0.292 Sum_probs=204.3
Q ss_pred chhhhccCCc-ceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCC-CCCccceeEEEecCCe
Q 012213 178 DDILECVKDN-NVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIR-HRNIVRLKAFCSNKET 254 (468)
Q Consensus 178 ~~~~~~~~~~-~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~ 254 (468)
+.+.+.|... +.||+|+||.||+|.+. +++.||||++............+.+|+.++..++ ||||+++++++.+.+.
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~ 103 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSE 103 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCe
Confidence 3345556665 88999999999999875 6899999998765554444567899999999994 6999999999999999
Q ss_pred eEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC---CCceEEeeccc
Q 012213 255 NLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS---DFEAHVADFGL 331 (468)
Q Consensus 255 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfgl 331 (468)
.++||||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||+
T Consensus 104 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~~~~~kL~Dfg~ 180 (327)
T 3lm5_A 104 IILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGM 180 (327)
T ss_dssp EEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTTBCCEEECCGGG
T ss_pred EEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCCCCcEEEeeCcc
Confidence 999999999999999997666667999999999999999999999887 999999999999998 78999999999
Q ss_pred cccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccc
Q 012213 332 AKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEG 411 (468)
Q Consensus 332 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (468)
++..... .......||+.|+|||++.+..++.++||||||+++|||++|+.||...... ..+....
T Consensus 181 a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~~i~------- 246 (327)
T 3lm5_A 181 SRKIGHA---CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQ----ETYLNIS------- 246 (327)
T ss_dssp CEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHHH-------
T ss_pred ccccCCc---cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCch----HHHHHHH-------
Confidence 9876422 1224467899999999999999999999999999999999999999753211 0011100
Q ss_pred hhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 412 VVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 412 ~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.................+.+++..|++.||++|||++|+++
T Consensus 247 --~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 247 --QVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp --HTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred --hcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 00000011112234556788999999999999999999986
No 130
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4.6e-43 Score=331.03 Aligned_cols=248 Identities=23% Similarity=0.318 Sum_probs=181.2
Q ss_pred hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCC-CCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKG-SSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
..+|+..+.||+|+||.||+|.+ .+++.||+|++...... ......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 56789999999999999999987 46899999998654322 23346788999999999999999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
|||+ +++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||++......
T Consensus 92 ~e~~-~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 165 (275)
T 2eue_A 92 IEYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp EECC-CEEHHHHHHTS--SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCSSCC------
T ss_pred ehhc-CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCChHhEEECCCCCEEEeecccceeccCc
Confidence 9999 77888887643 35899999999999999999999887 999999999999999999999999999865422
Q ss_pred CCCccccccccCccccCccccCCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcc
Q 012213 339 GASECMSAVAGSYGYIAPEYAYTLKV-DEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILD 417 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 417 (468)
.......||+.|+|||.+.+..+ +.++||||||+++|||++|+.||..... .........
T Consensus 166 ---~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~~~~----------- 226 (275)
T 2eue_A 166 ---NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-----PVLFKNISN----------- 226 (275)
T ss_dssp ------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHH-----------
T ss_pred ---ccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHh-----------
Confidence 12234568999999999987765 6899999999999999999999975321 111111000
Q ss_pred ccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 418 QRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 418 ~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.....+......+.+++.+|++.||++|||+.|+++
T Consensus 227 -~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 227 -GVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp -TCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -CCCCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 011122234456788999999999999999999976
No 131
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.4e-43 Score=342.20 Aligned_cols=262 Identities=24% Similarity=0.282 Sum_probs=202.2
Q ss_pred hhhhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccC---CCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCe
Q 012213 179 DILECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGIT---KGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKET 254 (468)
Q Consensus 179 ~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 254 (468)
++.+.|+..+.||+|+||.||+|.+ .+++.||+|++.... ......+.+.+|+.++++++||||+++++++.+.+.
T Consensus 23 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 102 (345)
T 3hko_A 23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQY 102 (345)
T ss_dssp HHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCe
Confidence 4567899999999999999999987 467889999986432 123445678999999999999999999999999999
Q ss_pred eEEEEeccCCCChhhhcccCC--------------------------------------CCCCCHHHHHHHHHHHHHHHH
Q 012213 255 NLLVYEYMPNGSLGEVLHGKR--------------------------------------GSFLKWEMRLKIAIEAAKGLS 296 (468)
Q Consensus 255 ~~lv~e~~~~gsL~~~l~~~~--------------------------------------~~~l~~~~~~~i~~~ia~~l~ 296 (468)
.++||||+++|+|.+++.... ...+++..+..++.||+.||+
T Consensus 103 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~ 182 (345)
T 3hko_A 103 ICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALH 182 (345)
T ss_dssp EEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHH
Confidence 999999999999999985210 112467788899999999999
Q ss_pred HhhhcCCCCeeecCCCCCcEEEcCCC--ceEEeeccccccccccCC--CccccccccCccccCccccCC--CCCCcchhh
Q 012213 297 YLHHDCSPLIIHRDVKSNNILLNSDF--EAHVADFGLAKYLQDTGA--SECMSAVAGSYGYIAPEYAYT--LKVDEKSDV 370 (468)
Q Consensus 297 ~LH~~~~~~ivH~dlk~~Nill~~~~--~~kl~Dfgla~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv 370 (468)
|||+.+ |+||||||+||+++.++ .+||+|||+++.+..... ........||+.|+|||.+.+ ..++.++||
T Consensus 183 ~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di 259 (345)
T 3hko_A 183 YLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDA 259 (345)
T ss_dssp HHHHTT---EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHH
T ss_pred HHHHCC---ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHH
Confidence 999887 99999999999998776 899999999987643222 122345679999999999865 678999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccccCC---CCCHHHHHHHHHHHHhhcccCCCCCC
Q 012213 371 YSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQRLS---NTPLSEAMQVFFVAMLCVQEHGVERP 447 (468)
Q Consensus 371 ~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~~~~~~l~~~c~~~~P~~RP 447 (468)
||||+++|||++|+.||...... +. ...+...... .........+.+++..|++.||++||
T Consensus 260 wslG~il~el~~g~~pf~~~~~~-----~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 323 (345)
T 3hko_A 260 WSAGVLLHLLLMGAVPFPGVNDA-----DT-----------ISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERF 323 (345)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHH-----HH-----------HHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSC
T ss_pred HHHHHHHHHHHHCCCCCCCCChH-----HH-----------HHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCC
Confidence 99999999999999999753311 11 1111111110 01112345678899999999999999
Q ss_pred CHHHHHH--HHHhc
Q 012213 448 TMREVVQ--MLAQA 459 (468)
Q Consensus 448 t~~ev~~--~L~~~ 459 (468)
++.|+++ .+++.
T Consensus 324 s~~~~l~hp~~~~~ 337 (345)
T 3hko_A 324 DAMRALQHPWISQF 337 (345)
T ss_dssp CHHHHHHSHHHHTT
T ss_pred CHHHHhcChhhccC
Confidence 9999987 45544
No 132
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=8.3e-44 Score=338.52 Aligned_cols=255 Identities=21% Similarity=0.365 Sum_probs=200.4
Q ss_pred hhccCCcceEcccCCcceEEEEcCC-C-------cEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecC
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPN-G-------EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNK 252 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 252 (468)
.++|...+.||+|+||+||+|.+.. + ..||+|.+..... ...+.+.+|+.++++++||||+++++++.+.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 84 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHR--NYSESFFEAASMMSKLSHKHLVLNYGVCVCG 84 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGG--GGHHHHHHHHHHHHTSCCTTBCCEEEEECCT
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccH--HHHHHHHHHHHHHHhCCCCCEeEEEEEEEeC
Confidence 4578888999999999999998753 3 4699999864332 3346789999999999999999999999999
Q ss_pred CeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc--------e
Q 012213 253 ETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE--------A 324 (468)
Q Consensus 253 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--------~ 324 (468)
+..++||||+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++. +
T Consensus 85 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~ 160 (289)
T 4fvq_A 85 DENILVQEFVKFGSLDTYLKKN-KNCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFI 160 (289)
T ss_dssp TCCEEEEECCTTCBHHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCEE
T ss_pred CCCEEEEECCCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCccccccccee
Confidence 9999999999999999999753 334899999999999999999999887 999999999999998887 9
Q ss_pred EEeeccccccccccCCCccccccccCccccCccccCC-CCCCcchhhHHHHHHHHHHHhCC-CCCCCCCCCCcCHHHHHH
Q 012213 325 HVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELITGR-RPVGDFGEEGLDIVQWTK 402 (468)
Q Consensus 325 kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~-~p~~~~~~~~~~~~~~~~ 402 (468)
||+|||++..... .....||+.|+|||.+.+ ..++.++||||||+++|||++|. +|+..... .....
T Consensus 161 kl~Dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~-----~~~~~ 229 (289)
T 4fvq_A 161 KLSDPGISITVLP------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS-----QRKLQ 229 (289)
T ss_dssp EECCCCSCTTTSC------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-----HHHHH
T ss_pred eeccCcccccccC------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch-----HHHHH
Confidence 9999999875431 123457899999999887 67899999999999999999954 45443221 11111
Q ss_pred HhhcccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCCCCc
Q 012213 403 MQTNSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKPNTF 465 (468)
Q Consensus 403 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~~~~ 465 (468)
..... ...+......+.+++..|++.||++|||+.|+++.|+++..+...
T Consensus 230 ~~~~~-------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~~ 279 (289)
T 4fvq_A 230 FYEDR-------------HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDLV 279 (289)
T ss_dssp HHHTT-------------CCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC-----
T ss_pred Hhhcc-------------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCC
Confidence 00000 001111234567899999999999999999999999999776543
No 133
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.3e-43 Score=369.56 Aligned_cols=250 Identities=26% Similarity=0.377 Sum_probs=200.0
Q ss_pred ceEcccCCcceEEEEc---CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEeccCC
Q 012213 188 NVIGRGGAGVVYRGVT---PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN 264 (468)
Q Consensus 188 ~~ig~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 264 (468)
+.||+|+||.||+|.+ ..++.||||+++.........+.+.+|+.++.+++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 5799999999999965 346789999997654444445779999999999999999999999965 558899999999
Q ss_pred CChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccCC-Ccc
Q 012213 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGA-SEC 343 (468)
Q Consensus 265 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~-~~~ 343 (468)
|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.+..... ...
T Consensus 454 g~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 528 (635)
T 4fl3_A 454 GPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 528 (635)
T ss_dssp EEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------
T ss_pred CCHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccc
Confidence 9999999643 35899999999999999999999887 99999999999999999999999999987653222 122
Q ss_pred ccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccccCCC
Q 012213 344 MSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQRLSN 422 (468)
Q Consensus 344 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 422 (468)
.....+|+.|+|||++.+..++.++|||||||++|||+| |+.||.+.... +.. ..+.......
T Consensus 529 ~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-----~~~-----------~~i~~~~~~~ 592 (635)
T 4fl3_A 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS-----EVT-----------AMLEKGERMG 592 (635)
T ss_dssp ------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH-----HHH-----------HHHHTTCCCC
T ss_pred ccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH-----HHH-----------HHHHcCCCCC
Confidence 233456789999999999999999999999999999999 99999764321 111 1111111122
Q ss_pred CCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhc
Q 012213 423 TPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQA 459 (468)
Q Consensus 423 ~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~ 459 (468)
.+......+.+++..||+.||++||++.+|+++|+++
T Consensus 593 ~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 593 CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 3334567788999999999999999999999999876
No 134
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.4e-42 Score=345.13 Aligned_cols=251 Identities=23% Similarity=0.284 Sum_probs=191.3
Q ss_pred hhhccCCc-ceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHH-hCCCCCCccceeEEEec----C
Q 012213 180 ILECVKDN-NVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTL-GKIRHRNIVRLKAFCSN----K 252 (468)
Q Consensus 180 ~~~~~~~~-~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~----~ 252 (468)
+.+.|... +.||+|+||+||++.+. +++.||||++... ..+.+|+.++ +..+||||+++++++.. .
T Consensus 59 ~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~ 131 (400)
T 1nxk_A 59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-------PKARREVELHWRASQCPHIVRIVDVYENLYAGR 131 (400)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred ccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCC
Confidence 35556554 78999999999999975 6889999998521 4577888886 44589999999998865 5
Q ss_pred CeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC---CCceEEeec
Q 012213 253 ETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS---DFEAHVADF 329 (468)
Q Consensus 253 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Df 329 (468)
...++||||+++|+|.+++.......+++..+..++.||+.||.|||+.+ |+||||||+|||++. ++.+||+||
T Consensus 132 ~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DF 208 (400)
T 1nxk_A 132 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDF 208 (400)
T ss_dssp EEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCC
T ss_pred cEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEec
Confidence 56899999999999999998655557999999999999999999999887 999999999999998 789999999
Q ss_pred cccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCc--CHHHHHHHhhcc
Q 012213 330 GLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGL--DIVQWTKMQTNS 407 (468)
Q Consensus 330 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~--~~~~~~~~~~~~ 407 (468)
|+++..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ........ ..
T Consensus 209 G~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~--~~ 283 (400)
T 1nxk_A 209 GFAKETTSH---NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRM--GQ 283 (400)
T ss_dssp TTCEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHH--TC
T ss_pred ccccccCCC---CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHc--Cc
Confidence 999865422 223456789999999999999999999999999999999999999976432211 11111110 00
Q ss_pred cccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 408 SKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 408 ~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
. ... ..........+.+++..|++.||++|||+.|+++
T Consensus 284 ~-----~~~----~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 284 Y-----EFP----NPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp C-----CCC----TTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred c-----cCC----CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0 000 0011223456788999999999999999999987
No 135
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=2.3e-43 Score=341.73 Aligned_cols=260 Identities=25% Similarity=0.346 Sum_probs=204.2
Q ss_pred hhccCCcceEcccCCcceEEEEc------CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCe
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT------PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKET 254 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 254 (468)
.++|+..+.||+|+||.||+|.+ .+++.||||++.... .......+.+|+.++++++||||+++++++.....
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVC-SEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEecccc-chhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 56788899999999999999984 357789999986332 22233568899999999999999999999999999
Q ss_pred eEEEEeccCCCChhhhcccCCC-----CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC---CCceEE
Q 012213 255 NLLVYEYMPNGSLGEVLHGKRG-----SFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS---DFEAHV 326 (468)
Q Consensus 255 ~~lv~e~~~~gsL~~~l~~~~~-----~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl 326 (468)
.++||||+++|+|.+++..... ..+++..++.++.|++.||.|||+.+ |+||||||+||+++. +..+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEE
Confidence 9999999999999999975432 35899999999999999999999887 999999999999994 456999
Q ss_pred eeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhh
Q 012213 327 ADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQT 405 (468)
Q Consensus 327 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 405 (468)
+|||++................+++.|+|||.+.+..++.++||||||+++|||+| |+.||..... .+....
T Consensus 185 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-----~~~~~~-- 257 (327)
T 2yfx_A 185 GDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN-----QEVLEF-- 257 (327)
T ss_dssp CCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-----HHHHHH--
T ss_pred CccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH-----HHHHHH--
Confidence 99999986653333333345567899999999988899999999999999999998 9999975321 111111
Q ss_pred cccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213 406 NSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ 460 (468)
Q Consensus 406 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 460 (468)
+........+......+.+++..|++.||++||++.|+++.|+.+.
T Consensus 258 ---------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~ 303 (327)
T 2yfx_A 258 ---------VTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 303 (327)
T ss_dssp ---------HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ---------HhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence 1111111122334567888999999999999999999999998764
No 136
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=3.8e-43 Score=339.71 Aligned_cols=245 Identities=22% Similarity=0.292 Sum_probs=178.8
Q ss_pred cceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCC-CCCccceeEEEecCCeeEEEEeccCC
Q 012213 187 NNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIR-HRNIVRLKAFCSNKETNLLVYEYMPN 264 (468)
Q Consensus 187 ~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~ 264 (468)
.+.||+|+||+||+|.+. +++.||||++... ....+.+|+.++..+. ||||+++++++.+....++||||+++
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~ 90 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNG 90 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh-----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCC
Confidence 478999999999999985 6899999998532 2356889999999997 99999999999999999999999999
Q ss_pred CChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC---ceEEeeccccccccccCCC
Q 012213 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF---EAHVADFGLAKYLQDTGAS 341 (468)
Q Consensus 265 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~Dfgla~~~~~~~~~ 341 (468)
|+|.+++... ..+++.++..++.||+.||+|||+.+ |+||||||+||+++.++ .+||+|||+++..... .
T Consensus 91 ~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~--~ 163 (325)
T 3kn6_A 91 GELFERIKKK--KHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPD--N 163 (325)
T ss_dssp CBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEECCC----
T ss_pred CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccceecCCC--C
Confidence 9999999754 45899999999999999999999887 99999999999998765 8999999999865422 2
Q ss_pred ccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCC--CcCHHHHHHHhhcccccchhhhcccc
Q 012213 342 ECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEE--GLDIVQWTKMQTNSSKEGVVKILDQR 419 (468)
Q Consensus 342 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~~ 419 (468)
.......||+.|+|||++.+..++.++||||||+++|||++|+.||...... .....+.. ..+....
T Consensus 164 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~-----------~~i~~~~ 232 (325)
T 3kn6_A 164 QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIM-----------KKIKKGD 232 (325)
T ss_dssp --------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHH-----------HHHTTTC
T ss_pred CcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHH-----------HHHHcCC
Confidence 2234566899999999999999999999999999999999999999763321 11111111 1111111
Q ss_pred CCCCC---HHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 420 LSNTP---LSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 420 ~~~~~---~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
..... ......+.+++..|++.||++|||++|+++
T Consensus 233 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 233 FSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp CCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred CCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 11111 123466889999999999999999999874
No 137
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=4.5e-43 Score=342.32 Aligned_cols=250 Identities=24% Similarity=0.282 Sum_probs=202.4
Q ss_pred hhccCCcceEcccCCcceEEEEcCC-CcEEEEEEecccCC-CCCchhHHHHHHHHHhCC-CCCCccceeEEEecCCeeEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPN-GEQVAVKKLLGITK-GSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLL 257 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 257 (468)
.++|+..+.||+|+||.||+|.++. ++.||||++..... .......+..|..++..+ +||+|+++++++.+.+..++
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 4678888999999999999999864 78899999865321 122335688899999988 79999999999999999999
Q ss_pred EEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccc
Q 012213 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQD 337 (468)
Q Consensus 258 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 337 (468)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 99 v~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 99999999999999643 34899999999999999999999887 99999999999999999999999999986432
Q ss_pred cCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcc
Q 012213 338 TGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILD 417 (468)
Q Consensus 338 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 417 (468)
. .......+||+.|+|||++.+..++.++|||||||++|||++|+.||...+. .... ..+..
T Consensus 174 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-----~~~~-----------~~i~~ 235 (353)
T 2i0e_A 174 D--GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-----DELF-----------QSIME 235 (353)
T ss_dssp T--TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHH-----------HHHHH
T ss_pred C--CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH-----HHHH-----------HHHHh
Confidence 1 2234566899999999999999999999999999999999999999975321 1111 11111
Q ss_pred ccCCCCCHHHHHHHHHHHHhhcccCCCCCCC-----HHHHHH
Q 012213 418 QRLSNTPLSEAMQVFFVAMLCVQEHGVERPT-----MREVVQ 454 (468)
Q Consensus 418 ~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt-----~~ev~~ 454 (468)
... ..+......+.+++..|++.||++||+ ++|+++
T Consensus 236 ~~~-~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 236 HNV-AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp CCC-CCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred CCC-CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 111 122234567888999999999999995 466654
No 138
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.5e-42 Score=327.86 Aligned_cols=248 Identities=24% Similarity=0.303 Sum_probs=203.0
Q ss_pred hhhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEE
Q 012213 179 DILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLL 257 (468)
Q Consensus 179 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 257 (468)
++.+.|+..+.||+|+||.||+|.+. ++..||+|++...... ..+.+.+|++++++++||||+++++++.+.+..++
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (277)
T 3f3z_A 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE--DVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYL 83 (277)
T ss_dssp CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCS--CHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred hhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccc--hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEE
Confidence 45678899999999999999999985 4678999998654332 34679999999999999999999999999999999
Q ss_pred EEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEE---cCCCceEEeecccccc
Q 012213 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL---NSDFEAHVADFGLAKY 334 (468)
Q Consensus 258 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgla~~ 334 (468)
||||+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||++..
T Consensus 84 v~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~ 158 (277)
T 3f3z_A 84 VMELCTGGELFERVVHK--RVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 158 (277)
T ss_dssp EEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred EEeccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEeccccee
Confidence 99999999999988643 34899999999999999999999887 9999999999999 7889999999999987
Q ss_pred ccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhh
Q 012213 335 LQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVK 414 (468)
Q Consensus 335 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (468)
+... .......||+.|+|||.+.+. ++.++||||||+++|||++|+.||...... +.. ..
T Consensus 159 ~~~~---~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-----~~~-----------~~ 218 (277)
T 3f3z_A 159 FKPG---KMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDS-----EVM-----------LK 218 (277)
T ss_dssp CCTT---SCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHH-----------HH
T ss_pred ccCc---cchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHH-----HHH-----------HH
Confidence 6422 223455789999999988764 899999999999999999999999753211 111 11
Q ss_pred hccccCCCCCH----HHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 415 ILDQRLSNTPL----SEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 415 ~~d~~~~~~~~----~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
+..... ..+. .....+.+++..|++.||++|||+.|+++
T Consensus 219 ~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 219 IREGTF-TFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HHHCCC-CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHhCCC-CCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111111 1111 12456788999999999999999999986
No 139
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=2.6e-43 Score=347.09 Aligned_cols=248 Identities=20% Similarity=0.251 Sum_probs=194.0
Q ss_pred CCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEeccC
Q 012213 185 KDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMP 263 (468)
Q Consensus 185 ~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 263 (468)
...+.||+|+||.||+|.+ .+|+.||+|++..... ...+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~ 169 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM--KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVD 169 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSH--HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc--ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCC
Confidence 3457899999999999987 4689999999864322 234678999999999999999999999999999999999999
Q ss_pred CCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEE--cCCCceEEeeccccccccccCCC
Q 012213 264 NGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL--NSDFEAHVADFGLAKYLQDTGAS 341 (468)
Q Consensus 264 ~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill--~~~~~~kl~Dfgla~~~~~~~~~ 341 (468)
+|+|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++.+....
T Consensus 170 ~~~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~-- 243 (373)
T 2x4f_A 170 GGELFDRIIDE-SYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE-- 243 (373)
T ss_dssp TCEEHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC--
T ss_pred CCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc--
Confidence 99999988643 335899999999999999999999887 9999999999999 567899999999998765322
Q ss_pred ccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccccCC
Q 012213 342 ECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQRLS 421 (468)
Q Consensus 342 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 421 (468)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+........... ....
T Consensus 244 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~-----~~~~~~i~~~~~~----~~~~--- 310 (373)
T 2x4f_A 244 -KLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND-----AETLNNILACRWD----LEDE--- 310 (373)
T ss_dssp -BCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHHHHTCCC----SCSG---
T ss_pred -ccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhccCC----CChh---
Confidence 22345699999999999988999999999999999999999999975321 1111111110000 0000
Q ss_pred CCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 422 NTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 422 ~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
........+.+++.+|++.||++|||+.|+++
T Consensus 311 -~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 311 -EFQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp -GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred -hhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 01123456788999999999999999999987
No 140
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.7e-43 Score=351.37 Aligned_cols=251 Identities=23% Similarity=0.246 Sum_probs=201.8
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCC-CCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITK-GSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
.++|+..+.||+|+||+||+|.++ +++.||+|++..... .......+.+|+.++..++||||+++++++.+.+..++|
T Consensus 68 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 147 (410)
T 3v8s_A 68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMV 147 (410)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 567888999999999999999985 588999999864211 112224588999999999999999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
|||+++|+|.+++... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 148 ~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~ 221 (410)
T 3v8s_A 148 MEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE 221 (410)
T ss_dssp ECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEeccceeEeeccC
Confidence 9999999999999643 4899999999999999999999887 999999999999999999999999999876532
Q ss_pred CCCccccccccCccccCccccCCCC----CCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhh
Q 012213 339 GASECMSAVAGSYGYIAPEYAYTLK----VDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVK 414 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (468)
........+||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+. ... ..+
T Consensus 222 -~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-----~~~-----------~~~ 284 (410)
T 3v8s_A 222 -GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-----VGT-----------YSK 284 (410)
T ss_dssp -SEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHH-----------HHH
T ss_pred -CcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCCh-----hhH-----------HHH
Confidence 222334678999999999987655 78999999999999999999999975321 111 111
Q ss_pred hcccc--C-CCCCHHHHHHHHHHHHhhcccCCCC--CCCHHHHHH
Q 012213 415 ILDQR--L-SNTPLSEAMQVFFVAMLCVQEHGVE--RPTMREVVQ 454 (468)
Q Consensus 415 ~~d~~--~-~~~~~~~~~~~~~l~~~c~~~~P~~--RPt~~ev~~ 454 (468)
++... + ..........+.+++..|+..+|++ ||+++||++
T Consensus 285 i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 285 IMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp HHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred HHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 11100 0 0011123456778999999999988 999999986
No 141
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.4e-42 Score=334.58 Aligned_cols=266 Identities=22% Similarity=0.312 Sum_probs=188.9
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 259 (468)
.+.|+..+.||+|+||+||+|.+. +|+.||||++..... ......+.+|+.++++++||||+++++++.+.+..++||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE-EGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCST-TCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccc-cccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 456888899999999999999975 588999999865432 223366889999999999999999999999999999999
Q ss_pred eccCCCChhhhcccCC----CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccc
Q 012213 260 EYMPNGSLGEVLHGKR----GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYL 335 (468)
Q Consensus 260 e~~~~gsL~~~l~~~~----~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 335 (468)
||++ |+|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 9997 69999886422 235899999999999999999999887 999999999999999999999999999876
Q ss_pred cccCCCccccccccCccccCccccCC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccc---cc
Q 012213 336 QDTGASECMSAVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSK---EG 411 (468)
Q Consensus 336 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~ 411 (468)
... ........||+.|+|||++.+ ..++.++|||||||++|||+||+.||....... .+............ ..
T Consensus 159 ~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~ 235 (317)
T 2pmi_A 159 GIP--VNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE-QLKLIFDIMGTPNESLWPS 235 (317)
T ss_dssp TSC--CCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCTTTCGG
T ss_pred CCC--cccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChhHhhh
Confidence 422 122345578999999999876 468999999999999999999999997633110 01001000000000 00
Q ss_pred hhhhc--cccC----CC---------CCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 412 VVKIL--DQRL----SN---------TPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 412 ~~~~~--d~~~----~~---------~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
..+.. .... .. ........+.+++.+|++.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 236 VTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 00000 0000 00 00122356889999999999999999999986
No 142
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=2.9e-42 Score=333.09 Aligned_cols=256 Identities=21% Similarity=0.284 Sum_probs=205.9
Q ss_pred chhhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCC----chhHHHHHHHHHhCCCCCCccceeEEEecC
Q 012213 178 DDILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSS----HDNGLSAEIRTLGKIRHRNIVRLKAFCSNK 252 (468)
Q Consensus 178 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 252 (468)
..+.+.|+..+.||+|+||.||+|.+. +|+.||||.+........ ..+.+.+|+.++++++||||+++++++.+.
T Consensus 8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 87 (321)
T 2a2a_A 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENR 87 (321)
T ss_dssp SCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred hhhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence 345677899999999999999999975 689999999875443221 246789999999999999999999999999
Q ss_pred CeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC----ceEEee
Q 012213 253 ETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF----EAHVAD 328 (468)
Q Consensus 253 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~D 328 (468)
...++||||+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~D 162 (321)
T 2a2a_A 88 TDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLID 162 (321)
T ss_dssp SEEEEEECCCCSCBHHHHHHTC--SCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECC
T ss_pred CEEEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEcc
Confidence 9999999999999999999643 35899999999999999999999887 99999999999999888 799999
Q ss_pred ccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhccc
Q 012213 329 FGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSS 408 (468)
Q Consensus 329 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
||++...... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||..... .+.........
T Consensus 163 fg~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~i~~~~ 234 (321)
T 2a2a_A 163 FGLAHEIEDG---VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-----QETLANITSVS 234 (321)
T ss_dssp CTTCEECCTT---CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-----HHHHHHHHTTC
T ss_pred CccceecCcc---ccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHhcc
Confidence 9999876532 223455689999999999999999999999999999999999999965321 11111110000
Q ss_pred ccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 409 KEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 409 ~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
. . .+... .......+.+++..|++.||++|||+.|+++
T Consensus 235 ~-~----~~~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 235 Y-D----FDEEF---FSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp C-C----CCHHH---HTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred c-c----cChhh---hcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 0 0 00000 0112356788999999999999999999986
No 143
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=6e-43 Score=338.79 Aligned_cols=259 Identities=26% Similarity=0.415 Sum_probs=204.8
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcE--EEEEEecccCCCCCchhHHHHHHHHHhCC-CCCCccceeEEEecCCeeE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQ--VAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKETNL 256 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~--vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 256 (468)
.++|+..+.||+|+||.||+|.+. ++.. +|||.+..... ......+.+|++++.++ +||||+++++++.+.+..+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 102 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYAS-KDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 102 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccc-hHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceE
Confidence 467888899999999999999975 4554 49998864322 22335689999999999 8999999999999999999
Q ss_pred EEEeccCCCChhhhcccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC
Q 012213 257 LVYEYMPNGSLGEVLHGKR--------------GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF 322 (468)
Q Consensus 257 lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~ 322 (468)
+||||+++|+|.+++.... ...+++..++.++.||+.||+|||+.+ |+||||||+||+++.++
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~ 179 (327)
T 1fvr_A 103 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENY 179 (327)
T ss_dssp EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGG
T ss_pred EEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCC
Confidence 9999999999999997543 346899999999999999999999887 99999999999999999
Q ss_pred ceEEeeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHH
Q 012213 323 EAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWT 401 (468)
Q Consensus 323 ~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~ 401 (468)
.+||+|||+++..... .......+++.|+|||.+.+..++.++||||||+++|||+| |+.||..... .+..
T Consensus 180 ~~kL~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-----~~~~ 251 (327)
T 1fvr_A 180 VAKIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-----AELY 251 (327)
T ss_dssp CEEECCTTCEESSCEE---CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHH
T ss_pred eEEEcccCcCcccccc---ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH-----HHHH
Confidence 9999999999754321 11233456889999999988889999999999999999998 9999975321 1111
Q ss_pred HHhhcccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCC
Q 012213 402 KMQTNSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKP 462 (468)
Q Consensus 402 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~ 462 (468)
.. +........+......+.+++..|++.||++|||+.|+++.|+++...
T Consensus 252 ~~-----------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 301 (327)
T 1fvr_A 252 EK-----------LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 301 (327)
T ss_dssp HH-----------GGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred HH-----------hhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 11 111111122233456788999999999999999999999999877433
No 144
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=9.7e-43 Score=334.78 Aligned_cols=265 Identities=23% Similarity=0.292 Sum_probs=197.7
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 259 (468)
.++|+..+.||+|+||+||+|.+. +|+.||||++..........+.+.+|+.++++++||||+++++++...+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 456888899999999999999985 5899999998654433333466889999999999999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccC
Q 012213 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTG 339 (468)
Q Consensus 260 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 339 (468)
||+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 82 e~~~~~~l~~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 156 (311)
T 4agu_A 82 EYCDHTVLHELDRYQ--RGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPS 156 (311)
T ss_dssp ECCSEEHHHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred EeCCCchHHHHHhhh--cCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc
Confidence 999999999988643 34899999999999999999999887 9999999999999999999999999998764222
Q ss_pred CCccccccccCccccCccccCC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhccccc--------
Q 012213 340 ASECMSAVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKE-------- 410 (468)
Q Consensus 340 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-------- 410 (468)
.......||..|+|||.+.+ ..++.++||||||+++|||+||+.||....... ..............
T Consensus 157 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 232 (311)
T 4agu_A 157 --DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVD--QLYLIRKTLGDLIPRHQQVFST 232 (311)
T ss_dssp -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCSCCHHHHHHHHT
T ss_pred --cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhccccccccccccc
Confidence 22345578999999998875 568999999999999999999999997633211 11100000000000
Q ss_pred --chh--hhccccCCC----CCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 411 --GVV--KILDQRLSN----TPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 411 --~~~--~~~d~~~~~----~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
... ...+..... ........+.+++..|++.||++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 233 NQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp CGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred ccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 000 000000000 00123455788999999999999999999986
No 145
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=7.7e-44 Score=336.96 Aligned_cols=262 Identities=23% Similarity=0.344 Sum_probs=206.0
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEe--cCCeeEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCS--NKETNLL 257 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~~l 257 (468)
.++|+..+.||+|+||.||+|.+. +++.||+|.+..........+.+.+|+.++++++||||+++++++. .....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 567888899999999999999985 6899999998754433344467899999999999999999999874 4567899
Q ss_pred EEeccCCCChhhhcccC--CCCCCCHHHHHHHHHHHHHHHHHhhhcC--CCCeeecCCCCCcEEEcCCCceEEeeccccc
Q 012213 258 VYEYMPNGSLGEVLHGK--RGSFLKWEMRLKIAIEAAKGLSYLHHDC--SPLIIHRDVKSNNILLNSDFEAHVADFGLAK 333 (468)
Q Consensus 258 v~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~--~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~ 333 (468)
||||+++|+|.+++... ....+++..++.++.|++.||+|||+.+ ..+|+||||||+||+++.++.+||+|||+++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 99999999999999643 2345899999999999999999999765 2349999999999999999999999999998
Q ss_pred cccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchh
Q 012213 334 YLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVV 413 (468)
Q Consensus 334 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (468)
..... ........|++.|+|||.+.+..++.++||||||+++|||+||+.||..... .+.. .
T Consensus 165 ~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~-----------~ 226 (279)
T 2w5a_A 165 ILNHD--TSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ-----KELA-----------G 226 (279)
T ss_dssp HC-----CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHH-----------H
T ss_pred eeccc--cccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH-----HHHH-----------H
Confidence 76422 1122345689999999999988999999999999999999999999975321 1111 1
Q ss_pred hhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213 414 KILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ 460 (468)
Q Consensus 414 ~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 460 (468)
.+........+......+.+++..|++.||++||++.|+++.+....
T Consensus 227 ~i~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~ 273 (279)
T 2w5a_A 227 KIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273 (279)
T ss_dssp HHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred HHhhcccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence 11111112223334567888999999999999999999998765544
No 146
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.9e-43 Score=353.77 Aligned_cols=257 Identities=21% Similarity=0.203 Sum_probs=202.3
Q ss_pred hhccCCcceEcccCCcceEEEEcCC-CcEEEEEEecccCC-CCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPN-GEQVAVKKLLGITK-GSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
.++|+..+.||+|+||+||+|.+++ ++.||||++..... .......+.+|+.++..++||||+++++++.+.+..++|
T Consensus 73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV 152 (437)
T 4aw2_A 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLV 152 (437)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEE
Confidence 5678899999999999999999864 78899999864211 111224588999999999999999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
|||+++|+|.+++... ...+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 153 ~Ey~~gg~L~~~l~~~-~~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~ 228 (437)
T 4aw2_A 153 MDYYVGGDLLTLLSKF-EDRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 228 (437)
T ss_dssp ECCCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EecCCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcchhhhhhcccC
Confidence 9999999999999742 345899999999999999999999887 999999999999999999999999999876532
Q ss_pred CCCccccccccCccccCccccC-----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchh
Q 012213 339 GASECMSAVAGSYGYIAPEYAY-----TLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVV 413 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (468)
........+||+.|+|||++. ...++.++|||||||++|||++|+.||...+.. ..+.... ..
T Consensus 229 -~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~----~~~~~i~-~~------ 296 (437)
T 4aw2_A 229 -GTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV----ETYGKIM-NH------ 296 (437)
T ss_dssp -SCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH----HHHHHHH-TH------
T ss_pred -CCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh----HHHHhhh-hc------
Confidence 222334568999999999986 567899999999999999999999999753211 0111100 00
Q ss_pred hhccccCCCCCHHHHHHHHHHHHhhcccCCCC--CCCHHHHHH
Q 012213 414 KILDQRLSNTPLSEAMQVFFVAMLCVQEHGVE--RPTMREVVQ 454 (468)
Q Consensus 414 ~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~--RPt~~ev~~ 454 (468)
.....+..........+.+++.+|+..+|++ ||+++|+++
T Consensus 297 -~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 297 -KERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp -HHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred -cccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 0000111111123456778899998888887 999999986
No 147
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=4.9e-43 Score=331.58 Aligned_cols=248 Identities=27% Similarity=0.352 Sum_probs=199.5
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCC-CCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITK-GSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
.++|+..+.||+|+||+||+|.+. +++.||||++..... .......+.+|+.++++++||||+++++++.+....++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 677888999999999999999875 567899999854321 112235688999999999999999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
|||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.++|+|||++......
T Consensus 88 ~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp ECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence 9999999999998643 34899999999999999999999777 999999999999999999999999998654321
Q ss_pred CCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccc
Q 012213 339 GASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQ 418 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 418 (468)
......|++.|+|||.+.+..++.++||||||+++|||++|+.||..... .+...... .
T Consensus 163 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~-----------~- 221 (279)
T 3fdn_A 163 ----RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY-----QETYKRIS-----------R- 221 (279)
T ss_dssp ---------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHHH-----------H-
T ss_pred ----cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH-----HHHHHHHH-----------h-
Confidence 22345789999999999999999999999999999999999999975321 11111000 0
Q ss_pred cCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 419 RLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 419 ~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.....+......+.+++..|++.||++|||+.|+++
T Consensus 222 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 222 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp TCCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred CCCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 001122233456778999999999999999999997
No 148
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2.6e-43 Score=355.78 Aligned_cols=250 Identities=22% Similarity=0.261 Sum_probs=195.0
Q ss_pred hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCC-CCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITK-GSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
.+.|+..+.||+|+||.||+|.+ .+|+.||||++..... .......+.+|+.+++.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 46788899999999999999997 4688999999865321 222235678899999999999999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeecCCCCCcEEEcCCCceEEeeccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHH-DCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQD 337 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 337 (468)
|||+++|+|.+++... ..+++..+..++.||+.||+|||+ .+ |+||||||+|||++.++.+||+|||+++....
T Consensus 227 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 227 MEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp ECCCSSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred EeeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence 9999999999998643 358999999999999999999997 67 99999999999999999999999999986432
Q ss_pred cCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcc
Q 012213 338 TGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILD 417 (468)
Q Consensus 338 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 417 (468)
. ........||+.|+|||++.+..++.++|||||||++|||++|+.||...+. .........
T Consensus 302 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~~i~~----------- 363 (446)
T 4ejn_A 302 D--GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLFELILM----------- 363 (446)
T ss_dssp -------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHH-----------
T ss_pred C--CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH-----HHHHHHHHh-----------
Confidence 2 2233557899999999999999999999999999999999999999965321 111111111
Q ss_pred ccCCCCCHHHHHHHHHHHHhhcccCCCCCC-----CHHHHHH
Q 012213 418 QRLSNTPLSEAMQVFFVAMLCVQEHGVERP-----TMREVVQ 454 (468)
Q Consensus 418 ~~~~~~~~~~~~~~~~l~~~c~~~~P~~RP-----t~~ev~~ 454 (468)
.. ...+......+.+++..|++.||++|| +++|+++
T Consensus 364 ~~-~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 364 EE-IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp CC-CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CC-CCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 11 112223446678899999999999999 9999975
No 149
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=9.7e-43 Score=334.40 Aligned_cols=266 Identities=22% Similarity=0.276 Sum_probs=199.9
Q ss_pred hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCC---CCchhHHHHHHHHHhCCC---CCCccceeEEEecCC
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKG---SSHDNGLSAEIRTLGKIR---HRNIVRLKAFCSNKE 253 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~---~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~ 253 (468)
.++|+..+.||+|+||+||+|.+ .+++.||||++...... ......+.+|+.+++.++ ||||+++++++....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~ 87 (308)
T 3g33_A 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSR 87 (308)
T ss_dssp --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccC
Confidence 56788999999999999999997 56889999998643321 112245777888777664 999999999997765
Q ss_pred -----eeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEee
Q 012213 254 -----TNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVAD 328 (468)
Q Consensus 254 -----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 328 (468)
..++||||++ |+|.+++.......+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~D 163 (308)
T 3g33_A 88 TDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLAD 163 (308)
T ss_dssp SSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCEEECS
T ss_pred CCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEEee
Confidence 4789999996 69999998766666999999999999999999999888 99999999999999999999999
Q ss_pred ccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhccc
Q 012213 329 FGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSS 408 (468)
Q Consensus 329 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
||+++..... .......||+.|+|||++.+..++.++|||||||++|||++|++||....... .+...........
T Consensus 164 fg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~ 239 (308)
T 3g33_A 164 FGLARIYSYQ---MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIGLPP 239 (308)
T ss_dssp CSCTTTSTTC---CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH-HHHHHHHHHCCCC
T ss_pred CccccccCCC---cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCC
Confidence 9999866422 22345678999999999998899999999999999999999999997633111 0111111000000
Q ss_pred ccchh---hhccccC---CCC-----CHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 409 KEGVV---KILDQRL---SNT-----PLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 409 ~~~~~---~~~d~~~---~~~-----~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.+... ......+ ... .......+.+++.+|++.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp TTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 00000 0000000 000 0123456788999999999999999999986
No 150
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=8.8e-43 Score=330.94 Aligned_cols=254 Identities=23% Similarity=0.295 Sum_probs=198.6
Q ss_pred hhhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEE
Q 012213 179 DILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLL 257 (468)
Q Consensus 179 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 257 (468)
++.+.|...+.||+|+||.||++.+. ++..||+|++..... ....+.+.+|++++++++||||+++++++.+....++
T Consensus 19 ~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 97 (285)
T 3is5_A 19 TIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS-QVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYI 97 (285)
T ss_dssp CHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred ChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeecccc-chhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEE
Confidence 34678889999999999999999974 688999999875443 2334678999999999999999999999999999999
Q ss_pred EEeccCCCChhhhcccC--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEE---cCCCceEEeecccc
Q 012213 258 VYEYMPNGSLGEVLHGK--RGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL---NSDFEAHVADFGLA 332 (468)
Q Consensus 258 v~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgla 332 (468)
||||+++|+|.+++... ....+++..+..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||++
T Consensus 98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a 174 (285)
T 3is5_A 98 VMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLA 174 (285)
T ss_dssp EECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCC
T ss_pred EEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeecc
Confidence 99999999999988542 2356899999999999999999999887 9999999999999 45688999999999
Q ss_pred ccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccch
Q 012213 333 KYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGV 412 (468)
Q Consensus 333 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (468)
..+... .......||+.|+|||.+. ..++.++||||||+++|||++|+.||..... .+........
T Consensus 175 ~~~~~~---~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~-----~~~~~~~~~~----- 240 (285)
T 3is5_A 175 ELFKSD---EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL-----EEVQQKATYK----- 240 (285)
T ss_dssp CC-------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHC-----
T ss_pred eecCCc---ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCH-----HHHHhhhccC-----
Confidence 876432 2234566899999999876 4689999999999999999999999975321 1111111000
Q ss_pred hhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 413 VKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 413 ~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
..............+.+++..|++.||++|||+.|+++
T Consensus 241 ----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 241 ----EPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp ----CCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ----CcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00111111112456778999999999999999999985
No 151
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.3e-43 Score=342.71 Aligned_cols=264 Identities=16% Similarity=0.169 Sum_probs=206.6
Q ss_pred hhccCCcceEcccCCcceEEEEcCC---------CcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccc-------
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPN---------GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVR------- 244 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~------- 244 (468)
.+.|+..+.||+|+||.||+|.+.. ++.||||.+... ..+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~ 113 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKLYS 113 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHHTT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhhcc
Confidence 3678889999999999999999864 789999998532 35889999999999999987
Q ss_pred --------eeEEEec-CCeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCc
Q 012213 245 --------LKAFCSN-KETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNN 315 (468)
Q Consensus 245 --------l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~N 315 (468)
+++++.. ....++||||+ +++|.+++.......+++..++.++.||+.||+|||+.+ |+||||||+|
T Consensus 114 ~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~N 189 (352)
T 2jii_A 114 TPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAEN 189 (352)
T ss_dssp CTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGG
T ss_pred CCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHH
Confidence 6777765 67889999999 999999998654567999999999999999999999887 9999999999
Q ss_pred EEEcCCC--ceEEeeccccccccccCCC-----ccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCC
Q 012213 316 ILLNSDF--EAHVADFGLAKYLQDTGAS-----ECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVG 388 (468)
Q Consensus 316 ill~~~~--~~kl~Dfgla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~ 388 (468)
|+++.++ .+||+|||+++.+...... .......||+.|+|||++.+..++.++||||||+++|||++|+.||.
T Consensus 190 Il~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~ 269 (352)
T 2jii_A 190 IFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWT 269 (352)
T ss_dssp EEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTG
T ss_pred EEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 9999998 8999999999876533221 11234579999999999999999999999999999999999999997
Q ss_pred CCCCCCcCHHHHHHHhhcccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccC
Q 012213 389 DFGEEGLDIVQWTKMQTNSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQK 461 (468)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 461 (468)
........+........... ..+.+.... .......+.+++..|++.||++|||++|+++.|+++..
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 336 (352)
T 2jii_A 270 NCLPNTEDIMKQKQKFVDKP----GPFVGPCGH--WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQ 336 (352)
T ss_dssp GGTTCHHHHHHHHHHHHHSC----CCEECTTSC--EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred cCCcCHHHHHHHHHhccCCh----hhhhhhccc--cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHH
Confidence 64322222222221111111 111111100 01224668889999999999999999999999988753
No 152
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=5.2e-44 Score=346.25 Aligned_cols=273 Identities=26% Similarity=0.315 Sum_probs=208.6
Q ss_pred hhccCCcceEcccCCcceEEEEc-----CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEe--cCC
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-----PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCS--NKE 253 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~ 253 (468)
.+.|+..+.||+|+||.||+|.+ .+++.||||++.... ....+.+.+|++++++++||||+++++++. +..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 99 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG--PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQ 99 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC--HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSC
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC--HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCc
Confidence 45788889999999999999983 468899999986432 223356899999999999999999999886 455
Q ss_pred eeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q 012213 254 TNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAK 333 (468)
Q Consensus 254 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~ 333 (468)
..++||||+++++|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 175 (327)
T 3lxl_A 100 SLRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAK 175 (327)
T ss_dssp EEEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGCE
T ss_pred eEEEEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccce
Confidence 6889999999999999997432 35899999999999999999999887 9999999999999999999999999998
Q ss_pred cccccCCC-ccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccch
Q 012213 334 YLQDTGAS-ECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGV 412 (468)
Q Consensus 334 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (468)
........ .......||..|+|||.+.+..++.++||||||+++|||++|+.||.....+.. ..+............
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~ 253 (327)
T 3lxl_A 176 LLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFL--RMMGCERDVPALSRL 253 (327)
T ss_dssp ECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH--HHCC----CCHHHHH
T ss_pred ecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhh--hhcccccccccHHHH
Confidence 76533221 122345678889999999988899999999999999999999999864211000 000000000000011
Q ss_pred hhhc-cccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccC
Q 012213 413 VKIL-DQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQK 461 (468)
Q Consensus 413 ~~~~-d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 461 (468)
.+.+ .......+......+.+++..|++.||++|||+.|+++.|+.+..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 303 (327)
T 3lxl_A 254 LELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWS 303 (327)
T ss_dssp HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC--
T ss_pred HHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 1111 111123344556778899999999999999999999999998754
No 153
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=5.5e-43 Score=358.84 Aligned_cols=255 Identities=24% Similarity=0.278 Sum_probs=207.4
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCC-CCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITK-GSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
.+.|+..+.||+|+||.||+|.+. +|+.||||++..... .......+.+|+.++..++||||+++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 456888899999999999999985 689999999864321 122335688999999999999999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
|||+++|+|.+++.......+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.+...
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 99999999999997655556999999999999999999999887 999999999999999999999999999876422
Q ss_pred CCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccc
Q 012213 339 GASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQ 418 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 418 (468)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....... .+..
T Consensus 340 ---~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~-~~~~i~~------------~i~~ 403 (576)
T 2acx_A 340 ---QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KREEVER------------LVKE 403 (576)
T ss_dssp ---CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC-CHHHHHH------------HHHH
T ss_pred ---ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch-hHHHHHH------------Hhhc
Confidence 22344589999999999999899999999999999999999999997643211 1111111 1111
Q ss_pred cCCCCCHHHHHHHHHHHHhhcccCCCCCC-----CHHHHHH
Q 012213 419 RLSNTPLSEAMQVFFVAMLCVQEHGVERP-----TMREVVQ 454 (468)
Q Consensus 419 ~~~~~~~~~~~~~~~l~~~c~~~~P~~RP-----t~~ev~~ 454 (468)
.....+......+.+++..|++.||++|| +++||++
T Consensus 404 ~~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 404 VPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred ccccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 11112233456778899999999999999 7788875
No 154
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=5.3e-42 Score=327.01 Aligned_cols=262 Identities=20% Similarity=0.252 Sum_probs=202.6
Q ss_pred hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEE-ecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-SNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~lv 258 (468)
.+.|+..+.||+|+||+||+|.+ .+++.||||++...... ..+..|+.++..++|++++..+.++ ...+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 4hgt_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C----CCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc----hHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence 56788999999999999999997 57889999986543322 3488999999999988877776665 667778999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEE---cCCCceEEeeccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL---NSDFEAHVADFGLAKYL 335 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgla~~~ 335 (468)
|||+ +++|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+||++ +.++.+||+|||+++..
T Consensus 84 ~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~ 158 (296)
T 4hgt_A 84 MELL-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp EECC-CCBHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred EEcc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCccceec
Confidence 9999 99999998743 335899999999999999999999887 9999999999999 78899999999999877
Q ss_pred cccCCC-----ccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCC-CcCHHHHHHHhhcccc
Q 012213 336 QDTGAS-----ECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEE-GLDIVQWTKMQTNSSK 409 (468)
Q Consensus 336 ~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~ 409 (468)
...... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||...... ...............
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~- 237 (296)
T 4hgt_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST- 237 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS-
T ss_pred cCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccc-
Confidence 543221 1223567899999999999999999999999999999999999999874322 111111111000000
Q ss_pred cchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccC
Q 012213 410 EGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQK 461 (468)
Q Consensus 410 ~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 461 (468)
..... .......+.+++..|++.||++|||++||++.|+++..
T Consensus 238 -~~~~~--------~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~ 280 (296)
T 4hgt_A 238 -PIEVL--------CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 280 (296)
T ss_dssp -CHHHH--------TTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred -hhhhh--------hccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Confidence 00000 01123568889999999999999999999999988754
No 155
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=5.7e-43 Score=343.98 Aligned_cols=252 Identities=24% Similarity=0.252 Sum_probs=194.4
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCC-CCchhHHHHHHHH-HhCCCCCCccceeEEEecCCeeEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKG-SSHDNGLSAEIRT-LGKIRHRNIVRLKAFCSNKETNLL 257 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~l 257 (468)
.++|+..+.||+|+||.||+|.++ +++.||||++...... ......+..|..+ ++.++||||+++++++.+.+..++
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 467888899999999999999985 5788999998654332 2223446667766 577899999999999999999999
Q ss_pred EEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccc
Q 012213 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQD 337 (468)
Q Consensus 258 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 337 (468)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++++||+|||+++....
T Consensus 117 v~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 99999999999999643 35889999999999999999999887 99999999999999999999999999986432
Q ss_pred cCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcc
Q 012213 338 TGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILD 417 (468)
Q Consensus 338 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 417 (468)
. .......+||+.|+|||++.+..++.++|||||||++|||++|+.||...+. .+. ...++.
T Consensus 192 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-----~~~-----------~~~i~~ 253 (373)
T 2r5t_A 192 H--NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-----AEM-----------YDNILN 253 (373)
T ss_dssp C--CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH-----HHH-----------HHHHHH
T ss_pred C--CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-----HHH-----------HHHHHh
Confidence 2 2234567899999999999999999999999999999999999999975321 111 111111
Q ss_pred ccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHH
Q 012213 418 QRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQML 456 (468)
Q Consensus 418 ~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L 456 (468)
... ..+......+.+++..|++.||++||++.+.++.+
T Consensus 254 ~~~-~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i 291 (373)
T 2r5t_A 254 KPL-QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFMEI 291 (373)
T ss_dssp SCC-CCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHH
T ss_pred ccc-CCCCCCCHHHHHHHHHHcccCHHhCCCCCCCHHHH
Confidence 111 11222345678899999999999999986444433
No 156
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=5.3e-43 Score=341.68 Aligned_cols=250 Identities=28% Similarity=0.344 Sum_probs=199.9
Q ss_pred hhhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCC-CchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEE
Q 012213 180 ILECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGS-SHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLL 257 (468)
Q Consensus 180 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 257 (468)
..+.|+..+.||+|+||+||+|.+ .+++.||||++....... .....+.+|++++++++||||+++++++...+..++
T Consensus 52 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 131 (348)
T 1u5q_A 52 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWL 131 (348)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEE
Confidence 356688889999999999999997 578999999986543322 223568899999999999999999999999999999
Q ss_pred EEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccc
Q 012213 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQD 337 (468)
Q Consensus 258 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 337 (468)
||||++ |+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 132 v~e~~~-g~l~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 132 VMEYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp EEECCS-EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred EEecCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 999997 6888887532 245899999999999999999999887 99999999999999999999999999986542
Q ss_pred cCCCccccccccCccccCccccC---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhh
Q 012213 338 TGASECMSAVAGSYGYIAPEYAY---TLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVK 414 (468)
Q Consensus 338 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (468)
. ....||+.|+|||++. ...++.++||||||+++|||++|+.||..... ...........
T Consensus 207 ~------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~-----~~~~~~~~~~~------ 269 (348)
T 1u5q_A 207 A------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----MSALYHIAQNE------ 269 (348)
T ss_dssp B------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----HHHHHHHHHSC------
T ss_pred C------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHhcC------
Confidence 1 3456899999999874 56789999999999999999999999965321 11111111110
Q ss_pred hccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHH
Q 012213 415 ILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQM 455 (468)
Q Consensus 415 ~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~ 455 (468)
.. ..........+.+++..||+.||++|||++|+++.
T Consensus 270 --~~--~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 270 --SP--ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp --CC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred --CC--CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00 11112234567789999999999999999999863
No 157
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=5.6e-43 Score=336.58 Aligned_cols=264 Identities=24% Similarity=0.331 Sum_probs=196.9
Q ss_pred chhhhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCC-CchhHHHHHHHHHhCCCCCCccceeEEEecCCee
Q 012213 178 DDILECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGS-SHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETN 255 (468)
Q Consensus 178 ~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 255 (468)
+.+.++|+..+.||+|+||.||+|.+ .+++.||||++....... .....+.+|+.++.+++||||+++++++......
T Consensus 8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 87 (311)
T 3ork_A 8 SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPA 87 (311)
T ss_dssp SEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETT
T ss_pred ceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCC
Confidence 34467889999999999999999997 578899999987543322 2235688999999999999999999998765543
Q ss_pred ----EEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q 012213 256 ----LLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGL 331 (468)
Q Consensus 256 ----~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl 331 (468)
++||||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 88 ~~~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~ 162 (311)
T 3ork_A 88 GPLPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGI 162 (311)
T ss_dssp EEEEEEEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSC
T ss_pred CcccEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccC
Confidence 9999999999999999643 35899999999999999999999887 99999999999999999999999999
Q ss_pred cccccccCCC-ccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhccccc
Q 012213 332 AKYLQDTGAS-ECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKE 410 (468)
Q Consensus 332 a~~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 410 (468)
++.+...... .......||+.|+|||++.+..++.++||||||+++|||+||+.||..... .............
T Consensus 163 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~-----~~~~~~~~~~~~~ 237 (311)
T 3ork_A 163 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP-----VSVAYQHVREDPI 237 (311)
T ss_dssp C------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHCCCC
T ss_pred cccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHhcCCCC
Confidence 9876533221 223345689999999999999999999999999999999999999975321 1111111111100
Q ss_pred chhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHH-HHHHhc
Q 012213 411 GVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVV-QMLAQA 459 (468)
Q Consensus 411 ~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~-~~L~~~ 459 (468)
... .........+.+++.+|++.||++||++.+++ ..|...
T Consensus 238 ~~~--------~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 238 PPS--------ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp CHH--------HHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred Ccc--------cccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 000 00011345678899999999999999766555 455544
No 158
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.1e-43 Score=346.81 Aligned_cols=205 Identities=28% Similarity=0.452 Sum_probs=164.4
Q ss_pred hhhhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCC-CCCccceeEEEecCC--e
Q 012213 179 DILECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIR-HRNIVRLKAFCSNKE--T 254 (468)
Q Consensus 179 ~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~--~ 254 (468)
.+.++|+..+.||+|+||.||+|.+ .+|+.||||++............+.+|+.++..+. ||||+++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 4567889999999999999999987 46899999998654444444466889999999997 999999999997544 6
Q ss_pred eEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q 012213 255 NLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKY 334 (468)
Q Consensus 255 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 334 (468)
.++||||++ |+|.+++... .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 158 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRS 158 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEecccC-cCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCccccc
Confidence 799999997 6899988643 5899999999999999999999887 99999999999999999999999999987
Q ss_pred ccccC-------------------CCccccccccCccccCccccCC-CCCCcchhhHHHHHHHHHHHhCCCCCCCC
Q 012213 335 LQDTG-------------------ASECMSAVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELITGRRPVGDF 390 (468)
Q Consensus 335 ~~~~~-------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~ 390 (468)
+.... .........||+.|+|||++.+ ..++.++|||||||++|||++|++||.+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 234 (388)
T 3oz6_A 159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS 234 (388)
T ss_dssp SSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence 64211 1112344679999999999876 67899999999999999999999999763
No 159
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=4.9e-42 Score=327.36 Aligned_cols=264 Identities=20% Similarity=0.247 Sum_probs=206.4
Q ss_pred hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEE-ecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC-SNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~lv 258 (468)
.++|+..+.||+|+||.||+|.+ .+++.||||++..... ...+.+|+.++..++|++++..+.++ ......++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEE
Confidence 56788899999999999999997 6789999998864332 24588999999999998877766655 566778999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEE---cCCCceEEeeccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL---NSDFEAHVADFGLAKYL 335 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgla~~~ 335 (468)
|||+ +++|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||++...
T Consensus 84 ~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~ 158 (296)
T 3uzp_A 84 MELL-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp EECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred EEec-CCCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCcccc
Confidence 9999 99999999733 345899999999999999999999887 9999999999999 47899999999999876
Q ss_pred cccCCC-----ccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCC-CCcCHHHHHHHhhcccc
Q 012213 336 QDTGAS-----ECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGE-EGLDIVQWTKMQTNSSK 409 (468)
Q Consensus 336 ~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~ 409 (468)
...... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||..... ................
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~- 237 (296)
T 3uzp_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST- 237 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHS-
T ss_pred cccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCC-
Confidence 543221 122456799999999999999999999999999999999999999986432 2112221111100000
Q ss_pred cchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCCC
Q 012213 410 EGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKPN 463 (468)
Q Consensus 410 ~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~~ 463 (468)
.... ........+.+++..|++.||++|||+.||++.|+++....
T Consensus 238 -~~~~--------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 282 (296)
T 3uzp_A 238 -PIEV--------LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp -CHHH--------HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred -chHH--------HHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence 0000 00122356888999999999999999999999999875443
No 160
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.2e-42 Score=339.39 Aligned_cols=198 Identities=29% Similarity=0.332 Sum_probs=174.3
Q ss_pred hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCC-----CCCccceeEEEecCCe
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIR-----HRNIVRLKAFCSNKET 254 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-----h~niv~l~~~~~~~~~ 254 (468)
.+.|+..+.||+|+||+||+|.+ .+++.||||++... ......+..|+.+++.++ ||||+++++++...+.
T Consensus 34 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~ 110 (360)
T 3llt_A 34 NNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI---KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDH 110 (360)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTE
T ss_pred cCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc---hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCe
Confidence 56788999999999999999998 46889999998532 222355778999998886 9999999999999999
Q ss_pred eEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC--------------
Q 012213 255 NLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS-------------- 320 (468)
Q Consensus 255 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~-------------- 320 (468)
.++||||+ +++|.+++.......+++..+..++.||+.||+|||+.+ |+||||||+|||++.
T Consensus 111 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~~~~~~~~ 186 (360)
T 3llt_A 111 MCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPYFEKSLITVRRVT 186 (360)
T ss_dssp EEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCTTCCEEEEEEECTT
T ss_pred eEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEccccccccccchhccc
Confidence 99999999 999999998766667999999999999999999999887 999999999999975
Q ss_pred -----------CCceEEeeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Q 012213 321 -----------DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGD 389 (468)
Q Consensus 321 -----------~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~ 389 (468)
++.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 187 ~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 261 (360)
T 3llt_A 187 DGKKIQIYRTKSTGIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRT 261 (360)
T ss_dssp TCCEEEEEEESCCCEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccccccccCCCCEEEEeccCceecCCC-----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCC
Confidence 789999999999864421 2345789999999999999999999999999999999999999976
Q ss_pred C
Q 012213 390 F 390 (468)
Q Consensus 390 ~ 390 (468)
.
T Consensus 262 ~ 262 (360)
T 3llt_A 262 H 262 (360)
T ss_dssp S
T ss_pred C
Confidence 3
No 161
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=6.8e-43 Score=336.77 Aligned_cols=266 Identities=22% Similarity=0.282 Sum_probs=205.8
Q ss_pred hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEe----cCCee
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCS----NKETN 255 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~----~~~~~ 255 (468)
.++|+..+.||+|+||.||++.+ .+++.||||++.... ....+.+.+|+.+++.++||||+++++++. .....
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 105 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE--QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEA 105 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS--HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC--HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCcee
Confidence 45688899999999999999997 578999999885422 233467889999999999999999999986 34467
Q ss_pred EEEEeccCCCChhhhcccC--CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q 012213 256 LLVYEYMPNGSLGEVLHGK--RGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAK 333 (468)
Q Consensus 256 ~lv~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~ 333 (468)
++||||+++|+|.+++... ....+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.
T Consensus 106 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~ 182 (317)
T 2buj_A 106 WLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMN 182 (317)
T ss_dssp EEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCE
T ss_pred EEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcch
Confidence 8999999999999998642 3456899999999999999999999887 9999999999999999999999999987
Q ss_pred cccccCCC-------ccccccccCccccCccccCCCC---CCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHH
Q 012213 334 YLQDTGAS-------ECMSAVAGSYGYIAPEYAYTLK---VDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKM 403 (468)
Q Consensus 334 ~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~---~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~ 403 (468)
........ .......||+.|+|||.+.+.. ++.++||||||+++|||++|+.||..............
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-- 260 (317)
T 2buj_A 183 QACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV-- 260 (317)
T ss_dssp ESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHH--
T ss_pred hcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHh--
Confidence 65321111 0112345799999999987654 68999999999999999999999854111111111100
Q ss_pred hhcccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCCCCc
Q 012213 404 QTNSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKPNTF 465 (468)
Q Consensus 404 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~~~~ 465 (468)
...............+.+++..|++.||.+|||+.|+++.|+.+..+..-
T Consensus 261 ------------~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~ 310 (317)
T 2buj_A 261 ------------QNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPG 310 (317)
T ss_dssp ------------HCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC
T ss_pred ------------hccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCC
Confidence 00000111223346788899999999999999999999999999776543
No 162
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=9.6e-43 Score=334.61 Aligned_cols=263 Identities=22% Similarity=0.252 Sum_probs=199.1
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCC-CchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGS-SHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
.+.|+..+.||+|+||.||+|.+. +++.||+|++....... ...+.+.+|+.++.+++||||+++++++...+..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 567888999999999999999975 68899999986543322 2235688999999999999999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
|||+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 113 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 187 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQ--GPLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASATTDE 187 (309)
T ss_dssp EECCCCEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC-------
T ss_pred EEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCcccccc
Confidence 9999999999999743 35899999999999999999999887 999999999999999999999999999866432
Q ss_pred CCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccc
Q 012213 339 GASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQ 418 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 418 (468)
. ........|++.|+|||.+.+..++.++||||||+++|||++|+.||..... . .......... .
T Consensus 188 ~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~-~~~~~~~~~~--------~ 252 (309)
T 2h34_A 188 K-LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL-----S-VMGAHINQAI--------P 252 (309)
T ss_dssp ----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH-----H-HHHHHHHSCC--------C
T ss_pred c-cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH-----H-HHHHHhccCC--------C
Confidence 1 2223345689999999999998999999999999999999999999975221 1 1111111100 0
Q ss_pred cCCCCCHHHHHHHHHHHHhhcccCCCCCC-CHHHHHHHHHhccCCC
Q 012213 419 RLSNTPLSEAMQVFFVAMLCVQEHGVERP-TMREVVQMLAQAQKPN 463 (468)
Q Consensus 419 ~~~~~~~~~~~~~~~l~~~c~~~~P~~RP-t~~ev~~~L~~~~~~~ 463 (468)
............+.+++.+|++.||++|| +++++++.|+.+....
T Consensus 253 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 253 RPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp CGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred CccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 00111122345677899999999999999 9999999999875443
No 163
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=5.7e-42 Score=342.87 Aligned_cols=252 Identities=23% Similarity=0.320 Sum_probs=192.2
Q ss_pred chhhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCC------CCchhHHHHHHHHHhCCCCCCccceeEEEe
Q 012213 178 DDILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKG------SSHDNGLSAEIRTLGKIRHRNIVRLKAFCS 250 (468)
Q Consensus 178 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 250 (468)
..+.+.|...+.||+|+||+||+|.+. +++.||||++...... ......+.+|+.++++++||||+++++++.
T Consensus 131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~ 210 (419)
T 3i6u_A 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 210 (419)
T ss_dssp HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE
T ss_pred hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence 345678899999999999999999874 5789999998653211 112235889999999999999999999985
Q ss_pred cCCeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC---CceEEe
Q 012213 251 NKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD---FEAHVA 327 (468)
Q Consensus 251 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~ 327 (468)
. +..++||||+++|+|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.+ +.+||+
T Consensus 211 ~-~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kl~ 284 (419)
T 3i6u_A 211 A-EDYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKIT 284 (419)
T ss_dssp S-SEEEEEEECCTTCBGGGGTSSS--CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred c-CceEEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEEEe
Confidence 4 5679999999999999998643 45899999999999999999999887 9999999999999754 459999
Q ss_pred eccccccccccCCCccccccccCccccCccccCC---CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHh
Q 012213 328 DFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYT---LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQ 404 (468)
Q Consensus 328 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 404 (468)
|||+++.... ........||+.|+|||++.+ ..++.++||||||+++|||+||+.||....... .+.....
T Consensus 285 DFG~a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~-~~~~~i~-- 358 (419)
T 3i6u_A 285 DFGHSKILGE---TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQIT-- 358 (419)
T ss_dssp CSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC-CHHHHHH--
T ss_pred ecccceecCC---CccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH-HHHHHHh--
Confidence 9999987642 222345679999999999853 568899999999999999999999997633221 1111111
Q ss_pred hcccccchhhhccccCCCCCH----HHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 405 TNSSKEGVVKILDQRLSNTPL----SEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 405 ~~~~~~~~~~~~d~~~~~~~~----~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
........ .....+.+++.+|++.||++|||+.|+++
T Consensus 359 -------------~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 359 -------------SGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp -------------TTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred -------------cCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 00001111 12456788999999999999999999986
No 164
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=3.5e-42 Score=336.25 Aligned_cols=262 Identities=19% Similarity=0.293 Sum_probs=205.5
Q ss_pred hhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCch---------------hHHHHHHHHHhCCCCCCccce
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHD---------------NGLSAEIRTLGKIRHRNIVRL 245 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~---------------~~~~~e~~~l~~l~h~niv~l 245 (468)
.++|+..+.||+|+||.||+|.+ +++.||||++.......... +.+.+|+.++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 57788999999999999999999 89999999986543222111 678999999999999999999
Q ss_pred eEEEecCCeeEEEEeccCCCChhhh------cccCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeecCCCCCcEEE
Q 012213 246 KAFCSNKETNLLVYEYMPNGSLGEV------LHGKRGSFLKWEMRLKIAIEAAKGLSYLHH-DCSPLIIHRDVKSNNILL 318 (468)
Q Consensus 246 ~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~dlk~~Nill 318 (468)
++++.+.+..++||||+++|+|.++ +.......+++..+..++.|++.||+|||+ .+ |+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEEE
Confidence 9999999999999999999999999 665446679999999999999999999998 77 9999999999999
Q ss_pred cCCCceEEeeccccccccccCCCccccccccCccccCccccCCC-CCCc-chhhHHHHHHHHHHHhCCCCCCCCCCCCcC
Q 012213 319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTL-KVDE-KSDVYSFGVVLLELITGRRPVGDFGEEGLD 396 (468)
Q Consensus 319 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~Dv~s~G~~l~elltg~~p~~~~~~~~~~ 396 (468)
+.++.+||+|||++...... ......|+..|+|||...+. .++. ++||||||+++|||++|+.||...... ..
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~ 260 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-VE 260 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-HH
T ss_pred cCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-HH
Confidence 99999999999999876422 33456789999999999877 6666 999999999999999999999763321 11
Q ss_pred HHHHHHHhhcccccch---hhhcc----ccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 397 IVQWTKMQTNSSKEGV---VKILD----QRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 397 ~~~~~~~~~~~~~~~~---~~~~d----~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
... .......... ..... .............+.+++..|++.||.+|||+.|+++
T Consensus 261 ~~~---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 261 LFN---NIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HHH---HHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHH---HHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111 1111100000 00000 0000001234567889999999999999999999987
No 165
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=9.7e-43 Score=338.51 Aligned_cols=271 Identities=24% Similarity=0.333 Sum_probs=194.7
Q ss_pred hhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHH--HhCCCCCCccceeEEEec-----CC
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRT--LGKIRHRNIVRLKAFCSN-----KE 253 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~--l~~l~h~niv~l~~~~~~-----~~ 253 (468)
.+.|+..+.||+|+||.||+|.+ +++.||||++.... ...+..|.++ +..++||||+++++++.. ..
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 85 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN-----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRM 85 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc-----hhhHHHHHHHHHHHhccCcchhhheecccccccCCCc
Confidence 56788899999999999999977 68999999985322 1334444444 556899999999986532 23
Q ss_pred eeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcC------CCCeeecCCCCCcEEEcCCCceEEe
Q 012213 254 TNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDC------SPLIIHRDVKSNNILLNSDFEAHVA 327 (468)
Q Consensus 254 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------~~~ivH~dlk~~Nill~~~~~~kl~ 327 (468)
..++||||+++|+|.+++.... .++..+..++.||+.||+|||+.. .++|+||||||+|||++.++.+||+
T Consensus 86 ~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 86 EYLLVMEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EEEEEECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEEC
T ss_pred eEEEEEecCCCCcHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEe
Confidence 5689999999999999996443 589999999999999999999770 0139999999999999999999999
Q ss_pred eccccccccccCC------CccccccccCccccCccccCC-------CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCC
Q 012213 328 DFGLAKYLQDTGA------SECMSAVAGSYGYIAPEYAYT-------LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEG 394 (468)
Q Consensus 328 Dfgla~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~ 394 (468)
|||+++.+..... ........||+.|+|||++.+ ..++.++|||||||++|||+||..||.......
T Consensus 163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 242 (336)
T 3g2f_A 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP 242 (336)
T ss_dssp CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCC
T ss_pred eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchh
Confidence 9999987653211 122234579999999999876 456679999999999999999977764422111
Q ss_pred cCHHHHHHHhhc-ccccchhhhc-----cccC---CCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213 395 LDIVQWTKMQTN-SSKEGVVKIL-----DQRL---SNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ 460 (468)
Q Consensus 395 ~~~~~~~~~~~~-~~~~~~~~~~-----d~~~---~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 460 (468)
.....+...... ...+.....+ ...+ ..........+.+++..||+.||++|||+.|+++.|+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll 317 (336)
T 3g2f_A 243 EYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM 317 (336)
T ss_dssp CCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence 000000000000 0000000000 0111 1122346678999999999999999999999999998763
No 166
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=4.1e-42 Score=329.38 Aligned_cols=261 Identities=22% Similarity=0.277 Sum_probs=204.0
Q ss_pred hhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCC--CCCchhHHHHHHHHHhCCCCCCccceeEEEe--cCCe
Q 012213 180 ILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITK--GSSHDNGLSAEIRTLGKIRHRNIVRLKAFCS--NKET 254 (468)
Q Consensus 180 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~ 254 (468)
+.++|+..+.||+|+||.||+|.+. +++.||+|.+..... .......+.+|+.++++++||||+++++++. +...
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 3567899999999999999999984 688999999864321 1233467899999999999999999999984 4557
Q ss_pred eEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q 012213 255 NLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKY 334 (468)
Q Consensus 255 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 334 (468)
.++||||++++ |.+++.......+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++..
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeeccccccc
Confidence 89999999876 777776655667999999999999999999999887 99999999999999999999999999987
Q ss_pred ccccCCCccccccccCccccCccccCCCC--CCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccch
Q 012213 335 LQDTGASECMSAVAGSYGYIAPEYAYTLK--VDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGV 412 (468)
Q Consensus 335 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (468)
..............||+.|+|||+..+.. ++.++||||||+++|||++|+.||.... ..........
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~i~~------ 227 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN-----IYKLFENIGK------ 227 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHH------
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch-----HHHHHHHHhc------
Confidence 65433333445567899999999987644 4789999999999999999999997522 1111111100
Q ss_pred hhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH--HHHhccC
Q 012213 413 VKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ--MLAQAQK 461 (468)
Q Consensus 413 ~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~--~L~~~~~ 461 (468)
. ....+......+.+++.+|++.||++|||++|+++ .+.+...
T Consensus 228 -----~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~ 272 (305)
T 2wtk_C 228 -----G-SYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP 272 (305)
T ss_dssp -----C-CCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred -----C-CCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence 0 01112234456778999999999999999999996 4554433
No 167
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=3.1e-42 Score=330.03 Aligned_cols=250 Identities=25% Similarity=0.340 Sum_probs=205.3
Q ss_pred hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 259 (468)
.+.|+..+.||+|+||.||+|.+ .+++.||||.+..... ....+.+.+|+.+++.++||||+++++++.+....++||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 99 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 99 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC-STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence 46688889999999999999987 4688999999865432 233467899999999999999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccC
Q 012213 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTG 339 (468)
Q Consensus 260 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 339 (468)
||+++++|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 100 e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 173 (303)
T 3a7i_A 100 EYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ 173 (303)
T ss_dssp ECCTTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECBTTB
T ss_pred EeCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecCccc
Confidence 99999999999864 35899999999999999999999887 9999999999999999999999999998765321
Q ss_pred CCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcccc
Q 012213 340 ASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQR 419 (468)
Q Consensus 340 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 419 (468)
.......|++.|+|||.+.+..++.++||||||+++|||++|+.||..... ......... ..
T Consensus 174 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~-----------~~ 235 (303)
T 3a7i_A 174 --IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP-----MKVLFLIPK-----------NN 235 (303)
T ss_dssp --CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----HHHHHHHHH-----------SC
T ss_pred --cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH-----HHHHHHhhc-----------CC
Confidence 223456789999999999999999999999999999999999999975321 111111000 11
Q ss_pred CCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHH
Q 012213 420 LSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQM 455 (468)
Q Consensus 420 ~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~ 455 (468)
....+......+.+++..|++.||++|||+.|+++.
T Consensus 236 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 236 PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp CCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred CCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 111122334567889999999999999999999873
No 168
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.6e-43 Score=348.56 Aligned_cols=256 Identities=21% Similarity=0.183 Sum_probs=200.8
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCC-CCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITK-GSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
.++|+..+.||+|+||+||++.++ +|+.||||++..... .......+.+|+.++..++||||+++++++.+.+..++|
T Consensus 60 ~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV 139 (412)
T 2vd5_A 60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLV 139 (412)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEE
T ss_pred hhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEE
Confidence 567888999999999999999984 689999999864211 112224588999999999999999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
|||+++|+|.+++... +..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++++||+|||+++.....
T Consensus 140 mE~~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~DFGla~~~~~~ 215 (412)
T 2vd5_A 140 MEYYVGGDLLTLLSKF-GERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFGSCLKLRAD 215 (412)
T ss_dssp ECCCCSCBHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EcCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEeechhheeccCC
Confidence 9999999999999743 235899999999999999999999887 999999999999999999999999999876532
Q ss_pred CCCccccccccCccccCccccC-------CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccc
Q 012213 339 GASECMSAVAGSYGYIAPEYAY-------TLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEG 411 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (468)
. .......+||+.|+|||++. ...++.++|||||||++|||++|+.||...+.. ..+.... ..
T Consensus 216 ~-~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~----~~~~~i~-~~---- 285 (412)
T 2vd5_A 216 G-TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA----ETYGKIV-HY---- 285 (412)
T ss_dssp S-CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH----HHHHHHH-TH----
T ss_pred C-ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH----HHHHHHH-hc----
Confidence 2 22234568999999999887 456899999999999999999999999753211 0111110 00
Q ss_pred hhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCC---CCHHHHHH
Q 012213 412 VVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVER---PTMREVVQ 454 (468)
Q Consensus 412 ~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~R---Pt~~ev~~ 454 (468)
... ..+...+......+.+++.+|+. +|++| |+++|+++
T Consensus 286 -~~~--~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 286 -KEH--LSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp -HHH--CCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred -ccC--cCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 000 00111112234567889999999 99998 68999875
No 169
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.6e-42 Score=352.92 Aligned_cols=256 Identities=25% Similarity=0.293 Sum_probs=205.9
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCC-CCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITK-GSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
.+.|...+.||+|+||.||+|.++ +|+.||+|++..... .......+..|+.++++++||||+++++++.+....++|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 466788899999999999999985 689999999864321 122335688999999999999999999999999999999
Q ss_pred EeccCCCChhhhcccCC--CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccc
Q 012213 259 YEYMPNGSLGEVLHGKR--GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQ 336 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~ 336 (468)
|||+++|+|.+++.... ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++.+.
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 99999999999986543 346999999999999999999999887 9999999999999999999999999998764
Q ss_pred ccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhc
Q 012213 337 DTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKIL 416 (468)
Q Consensus 337 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (468)
... .......||+.|+|||++.+..++.++|||||||++|||+||+.||...... ...........
T Consensus 341 ~~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~-~~~~~~~~~i~----------- 406 (543)
T 3c4z_A 341 AGQ--TKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVL----------- 406 (543)
T ss_dssp TTC--CCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCC-CCHHHHHHHHH-----------
T ss_pred CCC--cccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccc-hhHHHHHHHHh-----------
Confidence 322 2234458999999999999999999999999999999999999999764321 11111111111
Q ss_pred cccCCCCCHHHHHHHHHHHHhhcccCCCCCCCH-----HHHHH
Q 012213 417 DQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTM-----REVVQ 454 (468)
Q Consensus 417 d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~-----~ev~~ 454 (468)
.. ....+......+.+++..|++.||++||++ +||++
T Consensus 407 ~~-~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 407 EQ-AVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp HC-CCCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred hc-ccCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 11 111223345677889999999999999975 56653
No 170
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=3.5e-42 Score=348.26 Aligned_cols=260 Identities=25% Similarity=0.313 Sum_probs=195.9
Q ss_pred hhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCC-----
Q 012213 180 ILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKE----- 253 (468)
Q Consensus 180 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 253 (468)
+.++|+..+.||+|+||+||+|.+. +++.||||++..........+++.+|+.+++.++||||+++++++....
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 3577889999999999999999874 6889999999754333444567889999999999999999999996553
Q ss_pred -eeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q 012213 254 -TNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLA 332 (468)
Q Consensus 254 -~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla 332 (468)
..++||||+++ +|.+.+.. .+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 140 ~~~~lv~E~~~~-~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG~a 211 (464)
T 3ttj_A 140 QDVYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 211 (464)
T ss_dssp CEEEEEEECCSE-EHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCCC
T ss_pred CeEEEEEeCCCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEEee
Confidence 56999999975 56666642 3889999999999999999999887 999999999999999999999999999
Q ss_pred ccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhccc----
Q 012213 333 KYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSS---- 408 (468)
Q Consensus 333 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---- 408 (468)
+.... ........||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+. ...|......-+
T Consensus 212 ~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~----~~~~~~i~~~lg~p~~ 284 (464)
T 3ttj_A 212 RTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY----IDQWNKVIEQLGTPCP 284 (464)
T ss_dssp --------CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHHHHCSCCH
T ss_pred eecCC---CcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHhcCCCCH
Confidence 87642 2233556799999999999999999999999999999999999999976331 111211111000
Q ss_pred ------ccchhhhcc---------------ccCCCC-C---HHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 409 ------KEGVVKILD---------------QRLSNT-P---LSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 409 ------~~~~~~~~d---------------~~~~~~-~---~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.......++ ..+... . ......+.+++.+|+..||++|||++|+++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 355 (464)
T 3ttj_A 285 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ 355 (464)
T ss_dssp HHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 000111111 111000 0 112567889999999999999999999987
No 171
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.6e-42 Score=335.57 Aligned_cols=268 Identities=28% Similarity=0.393 Sum_probs=207.3
Q ss_pred hhccCCcceEcccCCcceEEEEc-----CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCC--
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-----PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKE-- 253 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-- 253 (468)
.+.|+..+.||+|+||.||++.+ .+++.||||++... .......+.+|+.++++++||||+++++++...+
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 117 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 117 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC--CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCC
Confidence 45678889999999999999983 46889999998643 2333467899999999999999999999987654
Q ss_pred eeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q 012213 254 TNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAK 333 (468)
Q Consensus 254 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~ 333 (468)
..++||||+++++|.+++.... ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.
T Consensus 118 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~~ 193 (326)
T 2w1i_A 118 NLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTK 193 (326)
T ss_dssp CCEEEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCE
T ss_pred ceEEEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcchh
Confidence 6799999999999999997543 45899999999999999999999887 9999999999999999999999999998
Q ss_pred cccccCCC-ccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccc---
Q 012213 334 YLQDTGAS-ECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSK--- 409 (468)
Q Consensus 334 ~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--- 409 (468)
........ .......++..|+|||.+.+..++.++||||||+++|||+||..|+.... ..+.........
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~------~~~~~~~~~~~~~~~ 267 (326)
T 2w1i_A 194 VLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP------AEFMRMIGNDKQGQM 267 (326)
T ss_dssp ECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHH------HHHHHHHCTTCCTHH
T ss_pred hccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCH------HHHHHhhccccchhh
Confidence 76533221 11233456788999999988889999999999999999999999975311 011110000000
Q ss_pred --cchhhhccc-cCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213 410 --EGVVKILDQ-RLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ 460 (468)
Q Consensus 410 --~~~~~~~d~-~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 460 (468)
..+.+.+.. .....+......+.+++..||+.||++|||+.|+++.|++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 268 IVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321 (326)
T ss_dssp HHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred hHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 001111111 112223345567889999999999999999999999999875
No 172
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2.3e-42 Score=332.93 Aligned_cols=263 Identities=22% Similarity=0.311 Sum_probs=195.4
Q ss_pred hhccCC-cceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCC-CCCCccceeEEEecCCeeEE
Q 012213 181 LECVKD-NNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLL 257 (468)
Q Consensus 181 ~~~~~~-~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 257 (468)
.+.|.. .+.||+|+||+||+|.+. +++.||||++.... ......+.+|+.++.++ +||||+++++++.+.+..++
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~l 88 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP--GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYL 88 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS--SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc--chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEE
Confidence 455666 478999999999999974 68999999986543 23346789999999885 79999999999999999999
Q ss_pred EEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc---eEEeecccccc
Q 012213 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE---AHVADFGLAKY 334 (468)
Q Consensus 258 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfgla~~ 334 (468)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++. +||+|||++..
T Consensus 89 v~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~ 163 (316)
T 2ac3_A 89 VFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSG 163 (316)
T ss_dssp EEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC-
T ss_pred EEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCccc
Confidence 99999999999999753 35899999999999999999999887 999999999999998776 99999999986
Q ss_pred ccccCC-----CccccccccCccccCccccCC-----CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHh
Q 012213 335 LQDTGA-----SECMSAVAGSYGYIAPEYAYT-----LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQ 404 (468)
Q Consensus 335 ~~~~~~-----~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 404 (468)
...... ........||+.|+|||++.. ..++.++||||||+++|||++|+.||......... |....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~---~~~~~ 240 (316)
T 2ac3_A 164 IKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCG---WDRGE 240 (316)
T ss_dssp ------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSC---C----
T ss_pred cccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccc---ccccc
Confidence 542211 111234568999999999865 45889999999999999999999999764322110 10000
Q ss_pred hcc--cccchhhhccccCCCCCH----HHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 405 TNS--SKEGVVKILDQRLSNTPL----SEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 405 ~~~--~~~~~~~~~d~~~~~~~~----~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
... .......+.... ...+. .....+.+++.+|++.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 241 ACPACQNMLFESIQEGK-YEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp CCHHHHHHHHHHHHHCC-CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred cchhHHHHHHHHHhccC-cccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 000 000001111111 11111 12456889999999999999999999987
No 173
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.8e-42 Score=329.62 Aligned_cols=273 Identities=21% Similarity=0.296 Sum_probs=204.6
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 259 (468)
.++|+..+.||+|+||.||+|.+. +|+.||||++............+.+|+.++++++||||+++++++...+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence 356788899999999999999985 6899999998654433333467889999999999999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccC
Q 012213 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTG 339 (468)
Q Consensus 260 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 339 (468)
||++ ++|.+++.......+++..+..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 82 e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~- 156 (299)
T 2r3i_A 82 EFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP- 156 (299)
T ss_dssp ECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC-
T ss_pred Eccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEECcchhhhhccCC-
Confidence 9997 69999998666567899999999999999999999887 999999999999999999999999999876422
Q ss_pred CCccccccccCccccCccccCCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhccccc---chhhh
Q 012213 340 ASECMSAVAGSYGYIAPEYAYTLK-VDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKE---GVVKI 415 (468)
Q Consensus 340 ~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 415 (468)
........+|+.|+|||.+.+.. ++.++||||||+++|||+||+.||...... ..+............. .....
T Consensus 157 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 234 (299)
T 2r3i_A 157 -VRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSM 234 (299)
T ss_dssp -SBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCTTTSTTGGGS
T ss_pred -ccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHHHhCCCchhhhhHhhcC
Confidence 12233456899999999988765 789999999999999999999999763311 0111111110000000 00000
Q ss_pred --ccccCCC---C-----CHHHHHHHHHHHHhhcccCCCCCCCHHHHHH--HHHhcc
Q 012213 416 --LDQRLSN---T-----PLSEAMQVFFVAMLCVQEHGVERPTMREVVQ--MLAQAQ 460 (468)
Q Consensus 416 --~d~~~~~---~-----~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~--~L~~~~ 460 (468)
....... . .......+.+++.+|++.||++|||+.|+++ .++++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~hp~~~~~~ 291 (299)
T 2r3i_A 235 PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVT 291 (299)
T ss_dssp TTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred cccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcChhhhcCC
Confidence 0000000 0 0112456788999999999999999999987 455443
No 174
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.8e-43 Score=341.73 Aligned_cols=256 Identities=23% Similarity=0.257 Sum_probs=202.3
Q ss_pred hhccCCcceEcccCCcceEEEEc----CCCcEEEEEEecccCC--CCCchhHHHHHHHHHhCC-CCCCccceeEEEecCC
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT----PNGEQVAVKKLLGITK--GSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKE 253 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 253 (468)
.++|+..+.||+|+||.||+|.+ .+++.||||++..... .......+.+|+.++..+ +||||+++++++....
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 46788899999999999999987 4789999999864321 112234577899999999 6999999999999999
Q ss_pred eeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q 012213 254 TNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAK 333 (468)
Q Consensus 254 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~ 333 (468)
..++||||+++|+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred eEEEEeecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 999999999999999999743 35899999999999999999999887 9999999999999999999999999998
Q ss_pred cccccCCCccccccccCccccCccccCC--CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccc
Q 012213 334 YLQDTGASECMSAVAGSYGYIAPEYAYT--LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEG 411 (468)
Q Consensus 334 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (468)
.+.... ........||+.|+|||++.+ ..++.++|||||||++|||+||+.||....... ...........
T Consensus 208 ~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~----- 280 (355)
T 1vzo_A 208 EFVADE-TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-SQAEISRRILK----- 280 (355)
T ss_dssp ECCGGG-GGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC-CHHHHHHHHHH-----
T ss_pred ecccCC-CCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc-hHHHHHHHHhc-----
Confidence 664222 222345679999999999885 347899999999999999999999997533221 12222111111
Q ss_pred hhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCC-----CHHHHHHH
Q 012213 412 VVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERP-----TMREVVQM 455 (468)
Q Consensus 412 ~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RP-----t~~ev~~~ 455 (468)
.....+......+.+++.+|++.||++|| +++|+++.
T Consensus 281 -------~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 281 -------SEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp -------CCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred -------cCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 11122233455678899999999999999 99999863
No 175
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.1e-41 Score=322.80 Aligned_cols=259 Identities=20% Similarity=0.272 Sum_probs=203.7
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCC----CchhHHHHHHHHHhCCCCCCccceeEEEecCCee
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGS----SHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETN 255 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 255 (468)
.+.|+..+.||+|+||.||+|.+. +++.||||.+....... ...+.+.+|+.++++++||||+++++++.+....
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 456888899999999999999986 68999999987543322 1246789999999999999999999999999999
Q ss_pred EEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC----ceEEeeccc
Q 012213 256 LLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF----EAHVADFGL 331 (468)
Q Consensus 256 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfgl 331 (468)
++||||+++++|.+++... ..+++..+..++.||+.||.|||+.+ ++||||||+||+++.++ .+||+|||+
T Consensus 84 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~ 158 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGI 158 (283)
T ss_dssp EEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred EEEEeecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEeccc
Confidence 9999999999999999643 35899999999999999999999887 99999999999998877 899999999
Q ss_pred cccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccc
Q 012213 332 AKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEG 411 (468)
Q Consensus 332 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (468)
+....... ......|++.|+|||.+.+..++.++||||||+++|||++|+.||..... .+.......... .
T Consensus 159 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~-~ 229 (283)
T 3bhy_A 159 AHKIEAGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK-----QETLTNISAVNY-D 229 (283)
T ss_dssp CEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHHHTTCC-C
T ss_pred ceeccCCC---cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch-----HHHHHHhHhccc-C
Confidence 98764221 22345689999999999988999999999999999999999999975321 111110000000 0
Q ss_pred hhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH--HHHhcc
Q 012213 412 VVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ--MLAQAQ 460 (468)
Q Consensus 412 ~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~--~L~~~~ 460 (468)
.... ........+.+++.+|++.||++|||+.|+++ .++.+.
T Consensus 230 ----~~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~ 273 (283)
T 3bhy_A 230 ----FDEE---YFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR 273 (283)
T ss_dssp ----CCHH---HHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred ----Ccch---hcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence 0000 00112356788999999999999999999997 455543
No 176
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1e-42 Score=352.83 Aligned_cols=198 Identities=24% Similarity=0.358 Sum_probs=155.5
Q ss_pred hhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEec-----CC
Q 012213 180 ILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSN-----KE 253 (468)
Q Consensus 180 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-----~~ 253 (468)
+.++|+..+.||+|+||+||+|.+. +++.||||++..........+.+.+|+.+++.++||||+++++++.. ..
T Consensus 51 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 130 (458)
T 3rp9_A 51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130 (458)
T ss_dssp SCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred cCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence 3567888999999999999999875 68999999986544333444678899999999999999999999843 35
Q ss_pred eeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q 012213 254 TNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAK 333 (468)
Q Consensus 254 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~ 333 (468)
..++||||+ +|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 131 ~~~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla~ 204 (458)
T 3rp9_A 131 ELYVVLEIA-DSDFKKLFRTP--VYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLAR 204 (458)
T ss_dssp CEEEEECCC-SEEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCB
T ss_pred eEEEEEecc-ccchhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccch
Confidence 689999998 57999998643 45899999999999999999999887 9999999999999999999999999998
Q ss_pred cccccCCC-------------------------ccccccccCccccCcccc-CCCCCCcchhhHHHHHHHHHHHhC
Q 012213 334 YLQDTGAS-------------------------ECMSAVAGSYGYIAPEYA-YTLKVDEKSDVYSFGVVLLELITG 383 (468)
Q Consensus 334 ~~~~~~~~-------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~s~G~~l~elltg 383 (468)
........ .......||+.|+|||++ ....++.++|||||||++|||+||
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 205 TVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp CTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred hccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 76422111 123456789999999975 566799999999999999999993
No 177
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.9e-42 Score=335.46 Aligned_cols=265 Identities=17% Similarity=0.242 Sum_probs=192.3
Q ss_pred hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 259 (468)
.++|+..+.||+|+||+||+|.+ .+++.||||++............+.+|+.++++++||||+++++++.+.+..++||
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 112 (329)
T 3gbz_A 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIF 112 (329)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEE
Confidence 67788999999999999999986 46889999998655444433456789999999999999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc-----CCCceEEeecccccc
Q 012213 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLN-----SDFEAHVADFGLAKY 334 (468)
Q Consensus 260 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-----~~~~~kl~Dfgla~~ 334 (468)
||++ |+|.+++.... .+++..+..++.||+.||+|||+.+ |+||||||+|||++ .++.+||+|||+++.
T Consensus 113 e~~~-~~L~~~~~~~~--~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~ 186 (329)
T 3gbz_A 113 EYAE-NDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186 (329)
T ss_dssp ECCS-EEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred ecCC-CCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence 9997 59999986543 4899999999999999999999887 99999999999994 455699999999987
Q ss_pred ccccCCCccccccccCccccCccccCCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccch-
Q 012213 335 LQDTGASECMSAVAGSYGYIAPEYAYTL-KVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGV- 412 (468)
Q Consensus 335 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~- 412 (468)
.... ........||+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..+...............
T Consensus 187 ~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~ 263 (329)
T 3gbz_A 187 FGIP--IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI-DQLFKIFEVLGLPDDTTWP 263 (329)
T ss_dssp HC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCTTTST
T ss_pred cCCc--ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH-HHHHHHHHHhCCCchhhhh
Confidence 6422 2223445689999999998774 4899999999999999999999999753211 011111111000000000
Q ss_pred --hh---hcc--ccCCCCCH------HHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 413 --VK---ILD--QRLSNTPL------SEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 413 --~~---~~d--~~~~~~~~------~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.. ... ........ .....+.+++..|++.||++|||+.|+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 264 GVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 00 000 00000011 12356789999999999999999999986
No 178
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.1e-42 Score=338.42 Aligned_cols=255 Identities=22% Similarity=0.264 Sum_probs=199.8
Q ss_pred cchhhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCC-CCCCccceeEEEecCCe
Q 012213 177 SDDILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKET 254 (468)
Q Consensus 177 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 254 (468)
...+.+.|+..+.||+|+||.||++.++ +|+.||||.+..... ...+|++++.++ +||||+++++++.+.+.
T Consensus 17 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~ 90 (342)
T 2qr7_A 17 SIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR------DPTEEIEILLRYGQHPNIITLKDVYDDGKY 90 (342)
T ss_dssp --CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC------CCHHHHHHHHHHTTSTTBCCEEEEEECSSE
T ss_pred ccCccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCE
Confidence 3455778999999999999999999985 588999999864322 245688888777 79999999999999999
Q ss_pred eEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC----CceEEeecc
Q 012213 255 NLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD----FEAHVADFG 330 (468)
Q Consensus 255 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfg 330 (468)
.++||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||++.++ +.+||+|||
T Consensus 91 ~~lv~E~~~gg~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg 165 (342)
T 2qr7_A 91 VYVVTELMKGGELLDKILRQ--KFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFG 165 (342)
T ss_dssp EEEEECCCCSCBHHHHHHTC--TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCT
T ss_pred EEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECC
Confidence 99999999999999998643 35899999999999999999999887 9999999999998543 359999999
Q ss_pred ccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhccccc
Q 012213 331 LAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKE 410 (468)
Q Consensus 331 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 410 (468)
+++...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.....+ ...+..........
T Consensus 166 ~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~~~~i~~~~~- 240 (342)
T 2qr7_A 166 FAKQLRAEN--GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDD--TPEEILARIGSGKF- 240 (342)
T ss_dssp TCEECBCTT--CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTS--CHHHHHHHHHHCCC-
T ss_pred CcccCcCCC--CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcC--CHHHHHHHHccCCc-
Confidence 998765322 2234567899999999998888999999999999999999999999753211 11111111111100
Q ss_pred chhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 411 GVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 411 ~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.. ...........+.+++..|++.||++|||+.|+++
T Consensus 241 ------~~-~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 241 ------SL-SGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp ------CC-CSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ------cc-CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 00 01111234456788999999999999999999986
No 179
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=5e-42 Score=328.79 Aligned_cols=252 Identities=24% Similarity=0.294 Sum_probs=201.9
Q ss_pred hhhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEE
Q 012213 179 DILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLL 257 (468)
Q Consensus 179 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 257 (468)
.+.+.|...+.||+|+||+||++.+. +|+.||+|.+...... ....+.+|+.++++++||||+++++++.+.+..++
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (304)
T 2jam_A 6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAF--RDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYL 83 (304)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred chhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccccc--chHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEE
Confidence 45678889999999999999999985 6899999998743322 23568899999999999999999999999999999
Q ss_pred EEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEE---cCCCceEEeecccccc
Q 012213 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL---NSDFEAHVADFGLAKY 334 (468)
Q Consensus 258 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgla~~ 334 (468)
||||+++++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||++ +.++.+||+|||++..
T Consensus 84 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~ 158 (304)
T 2jam_A 84 VMQLVSGGELFDRILER--GVYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKM 158 (304)
T ss_dssp EECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCC
T ss_pred EEEcCCCccHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCccee
Confidence 99999999999998643 34899999999999999999999887 9999999999999 7889999999999975
Q ss_pred ccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhh
Q 012213 335 LQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVK 414 (468)
Q Consensus 335 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (468)
... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||..... ...........
T Consensus 159 ~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~i~~~~------ 223 (304)
T 2jam_A 159 EQN----GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE-----SKLFEKIKEGY------ 223 (304)
T ss_dssp CCC----BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH-----HHHHHHHHHCC------
T ss_pred cCC----CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHcCC------
Confidence 432 122345689999999999999999999999999999999999999975321 11111100000
Q ss_pred hccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 415 ILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 415 ~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.. ............+.+++..|++.||++|||+.|+++
T Consensus 224 -~~-~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 224 -YE-FESPFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp -CC-CCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred -CC-CCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 00 001111233466888999999999999999999987
No 180
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=3.8e-42 Score=327.99 Aligned_cols=255 Identities=23% Similarity=0.324 Sum_probs=206.5
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCC-CCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKG-SSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
.+.|...+.||+|+||.||+|.+. +++.||+|.+...... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 567888999999999999999985 5788999988654322 22345688999999999999999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
|||+++++|.+++... ..+++.++..++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 94 ~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 168 (294)
T 2rku_A 94 LELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168 (294)
T ss_dssp EECCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence 9999999999988643 35899999999999999999999887 999999999999999999999999999876422
Q ss_pred CCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccc
Q 012213 339 GASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQ 418 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 418 (468)
. .......||+.|+|||.+.+..++.++||||||+++|||++|+.||...... ..+... ...
T Consensus 169 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~~~------------~~~ 230 (294)
T 2rku_A 169 G--ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK----ETYLRI------------KKN 230 (294)
T ss_dssp T--CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH----HHHHHH------------HTT
T ss_pred c--cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHHH------------hhc
Confidence 2 2234467899999999999989999999999999999999999999753211 011111 000
Q ss_pred cCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH--HHHhc
Q 012213 419 RLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ--MLAQA 459 (468)
Q Consensus 419 ~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~--~L~~~ 459 (468)
. ...+......+.+++.+|++.||++|||++|+++ .+.+.
T Consensus 231 ~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~ 272 (294)
T 2rku_A 231 E-YSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 272 (294)
T ss_dssp C-CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred c-CCCccccCHHHHHHHHHHcccChhhCcCHHHHhhChheecC
Confidence 0 1112233456778999999999999999999997 44443
No 181
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=6.2e-42 Score=350.08 Aligned_cols=254 Identities=25% Similarity=0.328 Sum_probs=198.6
Q ss_pred hhhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEE
Q 012213 179 DILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLL 257 (468)
Q Consensus 179 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 257 (468)
.+.+.|+..+.||+|+||+||+|.+. ++..||||++............+.+|+.+++.++||||+++++++.+....++
T Consensus 34 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 113 (494)
T 3lij_A 34 HLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYL 113 (494)
T ss_dssp CHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred chhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 45678899999999999999999985 68899999987654444445778999999999999999999999999999999
Q ss_pred EEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC---CceEEeecccccc
Q 012213 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD---FEAHVADFGLAKY 334 (468)
Q Consensus 258 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfgla~~ 334 (468)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.. +.+||+|||++..
T Consensus 114 v~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 114 VMECYKGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp EEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 99999999999988643 34899999999999999999999887 9999999999999764 5599999999987
Q ss_pred ccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhh
Q 012213 335 LQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVK 414 (468)
Q Consensus 335 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (468)
+... .......||+.|+|||++. ..++.++||||+||++|+|++|++||..... .+.......... .
T Consensus 189 ~~~~---~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~~~~i~~~~~----~ 255 (494)
T 3lij_A 189 FENQ---KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD-----QEILRKVEKGKY----T 255 (494)
T ss_dssp CBTT---BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHTCC----C
T ss_pred CCCC---ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhCCC----C
Confidence 6532 2234567999999999886 4699999999999999999999999976321 111111110000 0
Q ss_pred hccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 415 ILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 415 ~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
...+.. ......+.+++..|++.||++|||+.|+++
T Consensus 256 ~~~~~~----~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 256 FDSPEW----KNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp CCSGGG----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCchhc----ccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 000000 123456778999999999999999999885
No 182
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=4.1e-42 Score=326.10 Aligned_cols=253 Identities=23% Similarity=0.341 Sum_probs=205.3
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCC-CCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITK-GSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
.++|+..+.||+|+||.||+|.+. +++.||||.+..... .......+.+|+++++.++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 567888899999999999999985 577899999854321 122335789999999999999999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
|||+++|+|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 93 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~ 167 (284)
T 2vgo_A 93 LEFAPRGELYKELQKH--GRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSL 167 (284)
T ss_dssp ECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEECSSS
T ss_pred EEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccCccc
Confidence 9999999999999643 34899999999999999999999777 999999999999999999999999999765421
Q ss_pred CCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccc
Q 012213 339 GASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQ 418 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 418 (468)
......|++.|+|||.+.+..++.++||||||+++|||++|+.||..... .+... .+...
T Consensus 168 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~-----------~~~~~ 227 (284)
T 2vgo_A 168 ----RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH-----TETHR-----------RIVNV 227 (284)
T ss_dssp ----CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHH-----------HHHTT
T ss_pred ----ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH-----hHHHH-----------HHhcc
Confidence 22345789999999999999999999999999999999999999975321 11111 11111
Q ss_pred cCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH--HHHhc
Q 012213 419 RLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ--MLAQA 459 (468)
Q Consensus 419 ~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~--~L~~~ 459 (468)
.. ..+......+.+++..|++.||.+||++.|+++ .++..
T Consensus 228 ~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~ 269 (284)
T 2vgo_A 228 DL-KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKAN 269 (284)
T ss_dssp CC-CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHH
T ss_pred cc-CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhh
Confidence 11 112233456788999999999999999999987 44443
No 183
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=2.1e-42 Score=335.50 Aligned_cols=266 Identities=24% Similarity=0.343 Sum_probs=200.0
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 259 (468)
.+.|+..+.||+|+||.||+|.+. +|+.||||++..........+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 677889999999999999999985 4899999998655443333456789999999999999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccC
Q 012213 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTG 339 (468)
Q Consensus 260 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 339 (468)
||+++++|.+++... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.+....
T Consensus 104 e~~~~~~l~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 178 (331)
T 4aaa_A 104 EFVDHTILDDLELFP--NGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178 (331)
T ss_dssp ECCSEEHHHHHHHST--TCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecCCcchHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence 999999998887533 34899999999999999999999887 9999999999999999999999999998764322
Q ss_pred CCccccccccCccccCccccCCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhccc---------c
Q 012213 340 ASECMSAVAGSYGYIAPEYAYTL-KVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSS---------K 409 (468)
Q Consensus 340 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---------~ 409 (468)
.......||+.|+|||++.+. .++.++||||||+++|||++|+.||...... ..+........... .
T Consensus 179 --~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 255 (331)
T 4aaa_A 179 --EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI-DQLYHIMMCLGNLIPRHQELFNKN 255 (331)
T ss_dssp -------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSCCHHHHHHHHHC
T ss_pred --cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCCCChhhhhHhhhc
Confidence 223445689999999998775 7899999999999999999999999763311 01111110000000 0
Q ss_pred cchhhhccccC-CCCC-----HHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 410 EGVVKILDQRL-SNTP-----LSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 410 ~~~~~~~d~~~-~~~~-----~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
........+.. ...+ ......+.+++..|++.||++|||+.|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 256 PVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp GGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred cccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00000000111 0111 123466889999999999999999999886
No 184
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=6.9e-42 Score=326.15 Aligned_cols=252 Identities=26% Similarity=0.409 Sum_probs=198.1
Q ss_pred hccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEe
Q 012213 182 ECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYE 260 (468)
Q Consensus 182 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 260 (468)
+.+....+||+|+||.||+|.+ .+++.||||.+.... ....+.+.+|+.+++.++||||+++++++...+..++|||
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 99 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD--SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFME 99 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC--C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc--hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEE
Confidence 3455567999999999999997 468899999986543 2334678999999999999999999999999999999999
Q ss_pred ccCCCChhhhcccCCC-CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC-CCceEEeecccccccccc
Q 012213 261 YMPNGSLGEVLHGKRG-SFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS-DFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 261 ~~~~gsL~~~l~~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfgla~~~~~~ 338 (468)
|+++++|.+++..... ..+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+|||++......
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~ 176 (295)
T 2clq_A 100 QVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGI 176 (295)
T ss_dssp CCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC-
T ss_pred eCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCCC
Confidence 9999999999975432 35678999999999999999999887 999999999999988 899999999999876422
Q ss_pred CCCccccccccCccccCccccCCCC--CCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhc
Q 012213 339 GASECMSAVAGSYGYIAPEYAYTLK--VDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKIL 416 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (468)
. .......|++.|+|||.+.+.. ++.++||||||+++|||++|+.||........ .......
T Consensus 177 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~---~~~~~~~----------- 240 (295)
T 2clq_A 177 N--PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQA---AMFKVGM----------- 240 (295)
T ss_dssp ------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHH---HHHHHHH-----------
T ss_pred C--CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhH---HHHhhcc-----------
Confidence 1 2234457899999999987643 78999999999999999999999965321110 0000000
Q ss_pred cccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 417 DQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 417 d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.......+......+.+++..|++.||++||++.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 241 FKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp HCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred ccccccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 00111222334566788999999999999999999986
No 185
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=3.6e-42 Score=351.19 Aligned_cols=259 Identities=24% Similarity=0.300 Sum_probs=205.2
Q ss_pred hhhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEE
Q 012213 179 DILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLL 257 (468)
Q Consensus 179 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 257 (468)
.+.+.|+..+.||+|+||+||+|.+. +++.||||++............+.+|++++++++||||+++++++.+....++
T Consensus 19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 98 (486)
T 3mwu_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (486)
T ss_dssp HHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEE
Confidence 45788999999999999999999985 68999999986544333445678999999999999999999999999999999
Q ss_pred EEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc---CCCceEEeecccccc
Q 012213 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLN---SDFEAHVADFGLAKY 334 (468)
Q Consensus 258 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfgla~~ 334 (468)
||||+++|+|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+|||++ .++.+||+|||+++.
T Consensus 99 v~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 173 (486)
T 3mwu_A 99 VGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (486)
T ss_dssp EECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred EEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence 99999999999988643 35899999999999999999999887 99999999999995 456799999999987
Q ss_pred ccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhh
Q 012213 335 LQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVK 414 (468)
Q Consensus 335 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (468)
+... .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+... .+.........
T Consensus 174 ~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~~~~i~~~~------ 238 (486)
T 3mwu_A 174 FQQN---TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE-----YDILKRVETGK------ 238 (486)
T ss_dssp BCCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHTC------
T ss_pred CCCC---CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhCC------
Confidence 6422 22345679999999999876 599999999999999999999999975321 11111110000
Q ss_pred hccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH--HHHhc
Q 012213 415 ILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ--MLAQA 459 (468)
Q Consensus 415 ~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~--~L~~~ 459 (468)
.... ..........+.+++..|++.||++|||+.|+++ .+++.
T Consensus 239 -~~~~-~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~ 283 (486)
T 3mwu_A 239 -YAFD-LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283 (486)
T ss_dssp -CCSC-SGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHT
T ss_pred -CCCC-CcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccC
Confidence 0000 0001123456788999999999999999999997 34443
No 186
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=5.6e-42 Score=333.06 Aligned_cols=259 Identities=23% Similarity=0.328 Sum_probs=208.3
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCC-CCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKG-SSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
.+.|...+.||+|+||.||++.+. +++.||+|.+...... ....+.+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 567888899999999999999985 4788999988654322 22345688999999999999999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
|||+++++|.+++... ..+++.++..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 120 ~e~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 120 LELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp ECCCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EecCCCCCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 9999999999988643 35899999999999999999999887 999999999999999999999999999876422
Q ss_pred CCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccc
Q 012213 339 GASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQ 418 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 418 (468)
. .......||..|+|||++.+..++.++||||||+++|||++|+.||...... ..+.... ..
T Consensus 195 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~~-~~----------- 256 (335)
T 2owb_A 195 G--ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK----ETYLRIK-KN----------- 256 (335)
T ss_dssp T--CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH----HHHHHHH-HT-----------
T ss_pred c--ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH----HHHHHHh-cC-----------
Confidence 2 2234567899999999999889999999999999999999999999653210 0111110 00
Q ss_pred cCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH--HHHhccCCC
Q 012213 419 RLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ--MLAQAQKPN 463 (468)
Q Consensus 419 ~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~--~L~~~~~~~ 463 (468)
. ...+......+.+++.+|++.||++|||+.|+++ .+.....++
T Consensus 257 ~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~~~~ 302 (335)
T 2owb_A 257 E-YSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPA 302 (335)
T ss_dssp C-CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCCCS
T ss_pred C-CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCCCccc
Confidence 0 0111223456778999999999999999999997 455544443
No 187
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=1.7e-42 Score=329.48 Aligned_cols=252 Identities=25% Similarity=0.363 Sum_probs=187.6
Q ss_pred hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 259 (468)
.++|+..+.||+|+||+||+|.+ .+|+.||||++............+.++...++.++||||+++++++.+.+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 56788899999999999999997 57889999998654332222233445555688889999999999999999999999
Q ss_pred eccCCCChhhhccc--CCCCCCCHHHHHHHHHHHHHHHHHhhhc-CCCCeeecCCCCCcEEEcCCCceEEeecccccccc
Q 012213 260 EYMPNGSLGEVLHG--KRGSFLKWEMRLKIAIEAAKGLSYLHHD-CSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQ 336 (468)
Q Consensus 260 e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~ 336 (468)
||++ |+|.+++.. .....+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||++....
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 9997 588887753 2345699999999999999999999987 7 9999999999999999999999999998764
Q ss_pred ccCCCccccccccCccccCcccc----CCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccch
Q 012213 337 DTGASECMSAVAGSYGYIAPEYA----YTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGV 412 (468)
Q Consensus 337 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (468)
.. .......||+.|+|||.+ .+..++.++||||||+++|||+||+.||...... ......
T Consensus 162 ~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~---------- 225 (290)
T 3fme_A 162 DD---VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP---FQQLKQ---------- 225 (290)
T ss_dssp -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH---HHHHHH----------
T ss_pred cc---ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch---HHHHHH----------
Confidence 32 122344689999999995 5667899999999999999999999999753321 111111
Q ss_pred hhhccccC-CCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 413 VKILDQRL-SNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 413 ~~~~d~~~-~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.+.... ..........+.+++..|++.||++|||+.|+++
T Consensus 226 --~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 226 --VVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp --HHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred --HhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 111111 1111233456788999999999999999999987
No 188
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.3e-42 Score=335.18 Aligned_cols=261 Identities=23% Similarity=0.344 Sum_probs=201.0
Q ss_pred hhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEe
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYE 260 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 260 (468)
.+.|+..+.||+|+||.||+|.+.+ .||+|++..........+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 5678889999999999999998854 59999987654444444668899999999999999999999999999999999
Q ss_pred ccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccC-
Q 012213 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTG- 339 (468)
Q Consensus 261 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~- 339 (468)
|+++++|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+||+++ ++.+||+|||++.......
T Consensus 110 ~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~ 184 (319)
T 2y4i_B 110 LCKGRTLYSVVRDA-KIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQA 184 (319)
T ss_dssp CCCSEEHHHHTTSS-CCCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCCC-------
T ss_pred cccCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCCccccccccc
Confidence 99999999999743 346899999999999999999999887 99999999999998 6799999999987653211
Q ss_pred --CCccccccccCccccCccccCC---------CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhccc
Q 012213 340 --ASECMSAVAGSYGYIAPEYAYT---------LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSS 408 (468)
Q Consensus 340 --~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
.........|++.|+|||.+.. ..++.++||||||+++|||++|+.||.....+ .........
T Consensus 185 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~~~~~~~~- 258 (319)
T 2y4i_B 185 GRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE-----AIIWQMGTG- 258 (319)
T ss_dssp ---CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH-----HHHHHHHTT-
T ss_pred cccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHhccC-
Confidence 1122234568999999998864 45789999999999999999999999753311 111110000
Q ss_pred ccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCCC
Q 012213 409 KEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKPN 463 (468)
Q Consensus 409 ~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~~ 463 (468)
...... .......+.+++..|++.||++|||+.|++++|+++....
T Consensus 259 -------~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 259 -------MKPNLS--QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp -------CCCCCC--CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred -------CCCCCC--cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 111111 1122345778999999999999999999999999987654
No 189
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=7.2e-42 Score=334.51 Aligned_cols=268 Identities=19% Similarity=0.268 Sum_probs=200.9
Q ss_pred hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEec--------
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSN-------- 251 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-------- 251 (468)
..+|+..+.||+|+||+||+|.+ .+|+.||||++............+.+|+.+++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 56788999999999999999998 578999999986654444444678899999999999999999999876
Q ss_pred CCeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q 012213 252 KETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGL 331 (468)
Q Consensus 252 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl 331 (468)
.+..++||||++ |+|.+.+.... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 96 ~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 170 (351)
T 3mi9_A 96 KGSIYLVFDFCE-HDLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGL 170 (351)
T ss_dssp -CEEEEEEECCS-EEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CceEEEEEeccC-CCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccchh
Confidence 346799999997 47777775432 35899999999999999999999887 99999999999999999999999999
Q ss_pred cccccccC--CCccccccccCccccCccccCC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhccc
Q 012213 332 AKYLQDTG--ASECMSAVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSS 408 (468)
Q Consensus 332 a~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
++.+.... .........||+.|+|||++.+ ..++.++|||||||++|||+||+.||....... .+...........
T Consensus 171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~ 249 (351)
T 3mi9_A 171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH-QLALISQLCGSIT 249 (351)
T ss_dssp CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCC
T ss_pred cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCC
Confidence 98765222 1222345678999999998876 458999999999999999999999997633110 0111111000000
Q ss_pred ccchhhh-----ccc----cCCCCC-HHH------HHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 409 KEGVVKI-----LDQ----RLSNTP-LSE------AMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 409 ~~~~~~~-----~d~----~~~~~~-~~~------~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.+..... .+. ...... ... ...+.+++.+|++.||++|||++|+++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 250 PEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp TTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 0000000 000 000011 111 244789999999999999999999987
No 190
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=6.2e-42 Score=325.84 Aligned_cols=252 Identities=28% Similarity=0.391 Sum_probs=198.0
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEec----CCee
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSN----KETN 255 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~ 255 (468)
...|...+.||+|+||+||+|.+. ++..||+|.+..........+.+.+|+.+++.++||||+++++++.. ....
T Consensus 25 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 104 (290)
T 1t4h_A 25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI 104 (290)
T ss_dssp SCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEE
T ss_pred ceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceE
Confidence 345677789999999999999874 67889999987654444445678999999999999999999998865 3457
Q ss_pred EEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc-CCCceEEeecccccc
Q 012213 256 LLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLN-SDFEAHVADFGLAKY 334 (468)
Q Consensus 256 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfgla~~ 334 (468)
++||||+++|+|.+++... ..+++..+..++.+++.||.|||+.+ .+|+||||||+||+++ .++.+||+|||++..
T Consensus 105 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEEEEecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 9999999999999999643 34899999999999999999999653 2399999999999998 789999999999975
Q ss_pred ccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhh
Q 012213 335 LQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVK 414 (468)
Q Consensus 335 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (468)
... .......||+.|+|||.+.+ .++.++||||||+++|||++|+.||..... ............
T Consensus 182 ~~~----~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~----~~~~~~~~~~~~------ 246 (290)
T 1t4h_A 182 KRA----SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN----AAQIYRRVTSGV------ 246 (290)
T ss_dssp CCT----TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS----HHHHHHHHTTTC------
T ss_pred ccc----cccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCc----HHHHHHHHhccC------
Confidence 432 12234568999999998764 589999999999999999999999975321 111111111110
Q ss_pred hccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 415 ILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 415 ~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.. ...+......+.+++..|++.||++|||++|+++
T Consensus 247 --~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 247 --KP--ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp --CC--GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred --Cc--cccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 00 0011112346788999999999999999999986
No 191
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=4.7e-42 Score=324.20 Aligned_cols=249 Identities=25% Similarity=0.351 Sum_probs=195.0
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCC-CCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITK-GSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
.+.|...+.||+|+||.||+|.+. +|+.||||.+..... .......+.+|+..++.++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 467888899999999999999985 789999999864321 223345788999999999999999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
|||+++++|.+++... ..+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 90 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 164 (276)
T 2h6d_A 90 MEYVSGGELFDYICKH--GRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164 (276)
T ss_dssp EECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-
T ss_pred EeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccccccCCC
Confidence 9999999999999643 34899999999999999999999888 999999999999999999999999999876422
Q ss_pred CCCccccccccCccccCccccCCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcc
Q 012213 339 GASECMSAVAGSYGYIAPEYAYTLKV-DEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILD 417 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 417 (468)
.......|++.|+|||.+.+..+ +.++||||||+++|||++|+.||..... ....... .
T Consensus 165 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~~~~~~------------~ 224 (276)
T 2h6d_A 165 ---EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV-----PTLFKKI------------R 224 (276)
T ss_dssp ---------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHH------------H
T ss_pred ---cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH-----HHHHHHh------------h
Confidence 12234568999999999987765 5899999999999999999999965321 1111110 0
Q ss_pred ccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 418 QRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 418 ~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
......+......+.+++..|++.||++|||+.|+++
T Consensus 225 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 225 GGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp HCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cCcccCchhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 0111112223456788999999999999999999997
No 192
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.4e-42 Score=330.38 Aligned_cols=263 Identities=25% Similarity=0.351 Sum_probs=197.8
Q ss_pred hhccCCcceEcccCCcceEEEEcC--CCc--EEEEEEecccCC-CCCchhHHHHHHHHHhCCCCCCccceeEEEecCCee
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP--NGE--QVAVKKLLGITK-GSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETN 255 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 255 (468)
.++|+..+.||+|+||+||+|.+. +++ .||||++..... .....+.+.+|+.++++++||||+++++++.... .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 457888899999999999999853 333 689998865432 2233467899999999999999999999998765 8
Q ss_pred EEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccc
Q 012213 256 LLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYL 335 (468)
Q Consensus 256 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 335 (468)
++|+||+++|+|.+++... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++...
T Consensus 96 ~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRAL 171 (291)
T ss_dssp EEEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred eeeEecccCCCHHHHHHhc-cCCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEccccccccc
Confidence 8999999999999999743 245899999999999999999999887 999999999999999999999999999876
Q ss_pred cccCCCc-cccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchh
Q 012213 336 QDTGASE-CMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVV 413 (468)
Q Consensus 336 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (468)
....... ......+|+.|+|||...+..++.++||||||+++|||++ |+.||..... .+.........
T Consensus 172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~~~~~~~----- 241 (291)
T 1u46_A 172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-----SQILHKIDKEG----- 241 (291)
T ss_dssp CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHHHHHHTSC-----
T ss_pred cccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH-----HHHHHHHHccC-----
Confidence 5332211 2234567889999999988889999999999999999999 9999975331 11111111110
Q ss_pred hhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCCC
Q 012213 414 KILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKPN 463 (468)
Q Consensus 414 ~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~~ 463 (468)
.....+......+.+++..|++.||++|||+.++++.|+++.+.+
T Consensus 242 -----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 242 -----ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred -----CCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 011122334567889999999999999999999999999987654
No 193
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.5e-41 Score=332.23 Aligned_cols=251 Identities=26% Similarity=0.377 Sum_probs=201.6
Q ss_pred hhhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCC------chhHHHHHHHHHhCC-CCCCccceeEEEe
Q 012213 179 DILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSS------HDNGLSAEIRTLGKI-RHRNIVRLKAFCS 250 (468)
Q Consensus 179 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~------~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 250 (468)
.+.+.|+..+.||+|+||.||+|.+. +|+.||||++........ ....+.+|+.++.++ +||||+++++++.
T Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 170 (365)
T 2y7j_A 91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE 170 (365)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence 34567888999999999999999985 799999999865432211 124578899999998 7999999999999
Q ss_pred cCCeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecc
Q 012213 251 NKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFG 330 (468)
Q Consensus 251 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 330 (468)
.....++||||+++++|.+++... ..+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 171 ~~~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~~ikl~DfG 245 (365)
T 2y7j_A 171 SSSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFG 245 (365)
T ss_dssp BSSEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCT
T ss_pred eCCEEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEEecC
Confidence 999999999999999999999643 35899999999999999999999887 9999999999999999999999999
Q ss_pred ccccccccCCCccccccccCccccCccccCC------CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHh
Q 012213 331 LAKYLQDTGASECMSAVAGSYGYIAPEYAYT------LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQ 404 (468)
Q Consensus 331 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 404 (468)
++..+... .......||+.|+|||++.+ ..++.++||||||+++|||++|+.||..... ......
T Consensus 246 ~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~-----~~~~~~- 316 (365)
T 2y7j_A 246 FSCHLEPG---EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ-----ILMLRM- 316 (365)
T ss_dssp TCEECCTT---CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH-
T ss_pred cccccCCC---cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH-----HHHHHH-
Confidence 99876532 22345679999999998753 3588999999999999999999999965321 111110
Q ss_pred hcccccchhhhccccCCCCCH----HHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 405 TNSSKEGVVKILDQRLSNTPL----SEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 405 ~~~~~~~~~~~~d~~~~~~~~----~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
+..... ..+. .....+.+++.+|++.||++|||+.|+++
T Consensus 317 ----------i~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 317 ----------IMEGQY-QFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp ----------HHHTCC-CCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ----------HHhCCC-CCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 000000 0111 12345788999999999999999999986
No 194
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=2e-41 Score=343.05 Aligned_cols=263 Identities=19% Similarity=0.277 Sum_probs=205.4
Q ss_pred hhhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCC-CCccceeEEEecCCeeEE
Q 012213 180 ILECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRH-RNIVRLKAFCSNKETNLL 257 (468)
Q Consensus 180 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~l 257 (468)
+.+.|+..+.||+|+||.||+|.+ .+++.||||++...... .++..|++++..++| +++..+..++...+..++
T Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~l 80 (483)
T 3sv0_A 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVL 80 (483)
T ss_dssp ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS----CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEE
T ss_pred cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc----HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEE
Confidence 356788999999999999999997 56899999987643322 348899999999987 555566667778888899
Q ss_pred EEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEE---cCCCceEEeecccccc
Q 012213 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL---NSDFEAHVADFGLAKY 334 (468)
Q Consensus 258 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgla~~ 334 (468)
||||+ +++|.+++... ...+++..++.++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++.
T Consensus 81 vme~~-g~sL~~ll~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~ 155 (483)
T 3sv0_A 81 VMDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKK 155 (483)
T ss_dssp EEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCEE
T ss_pred EEECC-CCCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCccee
Confidence 99999 99999999743 345899999999999999999999887 9999999999999 6889999999999987
Q ss_pred ccccCCC-----ccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccc
Q 012213 335 LQDTGAS-----ECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSK 409 (468)
Q Consensus 335 ~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 409 (468)
+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ...+.........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~-~~~~~~i~~~~~~ 234 (483)
T 3sv0_A 156 YRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTK-KQKYEKISEKKVA 234 (483)
T ss_dssp CBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSH-HHHHHHHHHHHHH
T ss_pred ccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhH-HHHHHHHhhcccc
Confidence 7543221 122356799999999999999999999999999999999999999987442211 1111111000000
Q ss_pred cchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213 410 EGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ 460 (468)
Q Consensus 410 ~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~ 460 (468)
..+..+. . ....++.+++..||+.+|++||++.+|+++|+++.
T Consensus 235 ~~~~~l~----~----~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~ 277 (483)
T 3sv0_A 235 TSIEALC----R----GYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLF 277 (483)
T ss_dssp SCHHHHH----T----TSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred ccHHHHh----c----CCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 0111110 1 12356888999999999999999999999998874
No 195
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.5e-42 Score=337.05 Aligned_cols=268 Identities=24% Similarity=0.352 Sum_probs=198.0
Q ss_pred hhhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCC-----
Q 012213 180 ILECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKE----- 253 (468)
Q Consensus 180 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 253 (468)
+.+.|+..+.||+|+||.||+|.+ .+|+.||||++..........+.+.+|+.+++.++||||+++++++....
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 356788889999999999999997 46899999998654333333467889999999999999999999997653
Q ss_pred -eeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q 012213 254 -TNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLA 332 (468)
Q Consensus 254 -~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla 332 (468)
..++||||+ +++|.+++.. ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a 175 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLA 175 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTC
T ss_pred ceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeeecc
Confidence 459999999 8899999875 34899999999999999999999887 999999999999999999999999999
Q ss_pred ccccccCCCccccccccCccccCccccCC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhccccc-
Q 012213 333 KYLQDTGASECMSAVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKE- 410 (468)
Q Consensus 333 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~- 410 (468)
+..... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+... .+............+
T Consensus 176 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~~~~~~ 249 (367)
T 1cm8_A 176 RQADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-QLKEIMKVTGTPPAEF 249 (367)
T ss_dssp EECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHH
T ss_pred cccccc-----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHH
Confidence 875421 244578999999998876 679999999999999999999999997632110 000000000000000
Q ss_pred -------chhhhc-------cccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH--HHHhcc
Q 012213 411 -------GVVKIL-------DQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ--MLAQAQ 460 (468)
Q Consensus 411 -------~~~~~~-------d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~--~L~~~~ 460 (468)
.....+ ...+..........+.+++.+|+..||++|||+.|+++ .+++..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~ 315 (367)
T 1cm8_A 250 VQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 315 (367)
T ss_dssp HHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred HHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence 000000 00111111233466888999999999999999999988 454443
No 196
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.6e-42 Score=335.25 Aligned_cols=264 Identities=21% Similarity=0.297 Sum_probs=193.2
Q ss_pred hccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEe
Q 012213 182 ECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYE 260 (468)
Q Consensus 182 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 260 (468)
+.|...+.||+|+||+||+|.+. +++.||||++....... ....+.+|+.+++.++||||+++++++...+..++|||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEG-APCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFE 80 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccc-cchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEec
Confidence 45778899999999999999985 68899999986433221 11235579999999999999999999999999999999
Q ss_pred ccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccCC
Q 012213 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGA 340 (468)
Q Consensus 261 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 340 (468)
|++ |+|.+++... +..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~-- 153 (324)
T 3mtl_A 81 YLD-KDLKQYLDDC-GNIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIP-- 153 (324)
T ss_dssp CCS-EEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC-----
T ss_pred ccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccccCC--
Confidence 997 6999888743 346899999999999999999999887 999999999999999999999999999865422
Q ss_pred CccccccccCccccCccccCC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcc--
Q 012213 341 SECMSAVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILD-- 417 (468)
Q Consensus 341 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-- 417 (468)
........||+.|+|||.+.+ ..++.++||||||+++|||++|+.||.+..... .+............+.......
T Consensus 154 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~ 232 (324)
T 3mtl_A 154 TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE-QLHFIFRILGTPTEETWPGILSNE 232 (324)
T ss_dssp ---------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGCH
T ss_pred ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChHhchhhhcch
Confidence 222344568999999998876 568999999999999999999999997633110 0111111100000000011000
Q ss_pred -------ccCCC-----CCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 418 -------QRLSN-----TPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 418 -------~~~~~-----~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
..... ........+.+++..|++.||++|||++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 233 EFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00000 01122356788999999999999999999987
No 197
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=6e-43 Score=345.51 Aligned_cols=243 Identities=15% Similarity=0.179 Sum_probs=190.2
Q ss_pred hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCC-CCCchhHHHHHH---HHHhCCCCCCcccee-------EE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITK-GSSHDNGLSAEI---RTLGKIRHRNIVRLK-------AF 248 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~---~~l~~l~h~niv~l~-------~~ 248 (468)
.+.|+..+.||+|+||+||+|.+ .+|+.||||++..... .....+.+.+|+ ..++.++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 46788889999999999999997 5689999999875422 233446788999 566666899999998 77
Q ss_pred EecCCe-----------------eEEEEeccCCCChhhhcccCC-----CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCe
Q 012213 249 CSNKET-----------------NLLVYEYMPNGSLGEVLHGKR-----GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLI 306 (468)
Q Consensus 249 ~~~~~~-----------------~~lv~e~~~~gsL~~~l~~~~-----~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~i 306 (468)
+.+++. .++||||+ +|+|.+++.... ...+++..++.++.||+.||+|||+.+ |
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---L 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence 665543 78999999 689999997422 123446888999999999999999887 9
Q ss_pred eecCCCCCcEEEcCCCceEEeeccccccccccCCCccccccccCccccCccccCCC-----------CCCcchhhHHHHH
Q 012213 307 IHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTL-----------KVDEKSDVYSFGV 375 (468)
Q Consensus 307 vH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~Dv~s~G~ 375 (468)
+||||||+|||++.++.+||+|||+++... .......| +.|+|||++.+. .++.++|||||||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~-----~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~ 301 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDG-----ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL 301 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETT-----CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecC-----CcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence 999999999999999999999999998532 12345567 999999999877 7999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 376 VLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 376 ~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
++|||+||+.||....... ....+.. ... .....+.+++..||+.||++|||+.|+++
T Consensus 302 il~elltg~~Pf~~~~~~~----------------~~~~~~~-~~~----~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 302 VIYWIWCADLPITKDAALG----------------GSEWIFR-SCK----NIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHHHSSCCC------C----------------CSGGGGS-SCC----CCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHHHCCCCCccccccc----------------chhhhhh-hcc----CCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 9999999999997533111 1111111 111 22356778999999999999999999986
No 198
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=3.4e-41 Score=345.51 Aligned_cols=250 Identities=25% Similarity=0.326 Sum_probs=199.8
Q ss_pred hhhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCC-----------CchhHHHHHHHHHhCCCCCCcccee
Q 012213 179 DILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGS-----------SHDNGLSAEIRTLGKIRHRNIVRLK 246 (468)
Q Consensus 179 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----------~~~~~~~~e~~~l~~l~h~niv~l~ 246 (468)
.+.+.|...+.||+|+||+||+|.+. +++.||||++....... ...+.+.+|+.++++++||||++++
T Consensus 33 ~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~ 112 (504)
T 3q5i_A 33 KIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLF 112 (504)
T ss_dssp CGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred CcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence 45678899999999999999999985 57899999986543221 2346788999999999999999999
Q ss_pred EEEecCCeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC---c
Q 012213 247 AFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF---E 323 (468)
Q Consensus 247 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~---~ 323 (468)
+++.+....++||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++.++ .
T Consensus 113 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 113 DVFEDKKYFYLVTEFYEGGELFEQIINR--HKFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp EEEECSSEEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCCSS
T ss_pred EEEEcCCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCCcc
Confidence 9999999999999999999999988643 34899999999999999999999887 99999999999998876 6
Q ss_pred eEEeeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHH
Q 012213 324 AHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKM 403 (468)
Q Consensus 324 ~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~ 403 (468)
+||+|||++..+... .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+... .+....
T Consensus 188 ~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~~~~ 258 (504)
T 3q5i_A 188 IKIVDFGLSSFFSKD---YKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQND-----QDIIKK 258 (504)
T ss_dssp EEECCCTTCEECCTT---SCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH
T ss_pred EEEEECCCCEEcCCC---CccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHH
Confidence 999999999876532 22345679999999999874 699999999999999999999999976321 111111
Q ss_pred hhcccccchhhhccccCCCCCH----HHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 404 QTNSSKEGVVKILDQRLSNTPL----SEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 404 ~~~~~~~~~~~~~d~~~~~~~~----~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
+..... ..+. .....+.+++..|++.||.+|||+.|+++
T Consensus 259 -----------i~~~~~-~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 259 -----------VEKGKY-YFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp -----------HHHCCC-CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -----------HHcCCC-CCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 111111 0111 12356788999999999999999999986
No 199
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=3.8e-42 Score=337.66 Aligned_cols=264 Identities=24% Similarity=0.329 Sum_probs=202.5
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 259 (468)
.++|+..+.||+|+||+||+|.+. +++.||+|++.... .......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 110 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 110 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc-CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEE
Confidence 467888999999999999999985 68899999986432 2223457889999999999999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhc-CCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHD-CSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 260 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
||+++|+|.+++.... .+++..+..++.+++.||+|||+. + |+||||||+||+++.++.+||+|||++......
T Consensus 111 e~~~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 185 (360)
T 3eqc_A 111 EHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 185 (360)
T ss_dssp CCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred ECCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCcccccc
Confidence 9999999999996433 489999999999999999999985 7 999999999999999999999999999765422
Q ss_pred CCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHH------------HH-----
Q 012213 339 GASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQ------------WT----- 401 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~------------~~----- 401 (468)
......||+.|+|||++.+..++.++||||||+++|||+||+.||............ +.
T Consensus 186 ----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (360)
T 3eqc_A 186 ----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG 261 (360)
T ss_dssp ----C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------
T ss_pred ----cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCC
Confidence 123457899999999999999999999999999999999999999753311100000 00
Q ss_pred ------HHhh---cccccchhhhccccCCCC-CHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 402 ------KMQT---NSSKEGVVKILDQRLSNT-PLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 402 ------~~~~---~~~~~~~~~~~d~~~~~~-~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.... ....+....+........ .......+.+++..|++.||++|||+.|+++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 262 RPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp ------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0000 000000011111111111 1123456889999999999999999999986
No 200
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=8.3e-42 Score=343.15 Aligned_cols=203 Identities=26% Similarity=0.359 Sum_probs=168.5
Q ss_pred hhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecC-----C
Q 012213 180 ILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNK-----E 253 (468)
Q Consensus 180 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~ 253 (468)
+.++|+..+.||+|+||.||+|.+. +++.||||++..........+.+.+|+.+++.++||||+++++++... .
T Consensus 24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 3577889999999999999999974 578899999975444334446788999999999999999999999766 5
Q ss_pred eeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q 012213 254 TNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAK 333 (468)
Q Consensus 254 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~ 333 (468)
..++||||++ |+|.+++.. ...+++..+..++.||+.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 104 ~~~lv~e~~~-~~L~~~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGla~ 177 (432)
T 3n9x_A 104 ELYIVLEIAD-SDLKKLFKT--PIFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLAR 177 (432)
T ss_dssp CEEEEEECCS-EEHHHHHHS--SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred eEEEEEecCC-cCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCCcc
Confidence 6899999996 699999964 345899999999999999999999887 9999999999999999999999999998
Q ss_pred cccccCCC--------------------ccccccccCccccCcccc-CCCCCCcchhhHHHHHHHHHHHhCCCCCC
Q 012213 334 YLQDTGAS--------------------ECMSAVAGSYGYIAPEYA-YTLKVDEKSDVYSFGVVLLELITGRRPVG 388 (468)
Q Consensus 334 ~~~~~~~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~Dv~s~G~~l~elltg~~p~~ 388 (468)
........ .......||+.|+|||++ ....++.++|||||||++|||++|..||.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 178 TINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp EC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred cccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 76532211 123567899999999985 56679999999999999999998665554
No 201
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=3.1e-41 Score=327.05 Aligned_cols=258 Identities=22% Similarity=0.287 Sum_probs=199.0
Q ss_pred hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCC-CCCccceeEEEec--CCeeE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIR-HRNIVRLKAFCSN--KETNL 256 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~--~~~~~ 256 (468)
.+.|+..+.||+|+||+||+|.+ .+++.||||++... ..+.+.+|+.++++++ ||||+++++++.+ ....+
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 109 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA 109 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc-----chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceE
Confidence 46788899999999999999986 57899999998532 2367899999999997 9999999999987 56789
Q ss_pred EEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC-ceEEeeccccccc
Q 012213 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF-EAHVADFGLAKYL 335 (468)
Q Consensus 257 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfgla~~~ 335 (468)
+||||+++++|.+++.. +++..+..++.||+.||+|||+.+ |+||||||+|||++.++ .+||+|||+++..
T Consensus 110 lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~ 181 (330)
T 3nsz_A 110 LVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY 181 (330)
T ss_dssp EEEECCCCCCHHHHGGG-----CCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EEEeccCchhHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceEc
Confidence 99999999999999852 789999999999999999999887 99999999999999776 8999999999876
Q ss_pred cccCCCccccccccCccccCccccCC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHh----------
Q 012213 336 QDTGASECMSAVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQ---------- 404 (468)
Q Consensus 336 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~---------- 404 (468)
.... ......|+..|+|||.+.+ ..++.++|||||||++|||++|+.||.........+.......
T Consensus 182 ~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 258 (330)
T 3nsz_A 182 HPGQ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID 258 (330)
T ss_dssp CTTC---CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHH
T ss_pred CCCC---ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHH
Confidence 5322 2344578999999999877 6789999999999999999999999965322111111111100
Q ss_pred --hcccccchhhhcccc--------C-CCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 405 --TNSSKEGVVKILDQR--------L-SNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 405 --~~~~~~~~~~~~d~~--------~-~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.........+..... . ..........+.+++..|++.||++|||++|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 259 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp HTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000000000000000 0 1111123567889999999999999999999986
No 202
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=5.8e-42 Score=349.67 Aligned_cols=254 Identities=25% Similarity=0.325 Sum_probs=204.3
Q ss_pred hhhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCC-CCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeE
Q 012213 179 DILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKG-SSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNL 256 (468)
Q Consensus 179 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 256 (468)
.+.+.|+..+.||+|+||.||+|.+. +|+.||||++...... ......+.+|+.++++++||||+++++++.+.+..+
T Consensus 23 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 102 (484)
T 3nyv_A 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFY 102 (484)
T ss_dssp CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred cccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 34678889999999999999999985 7899999998654332 334467899999999999999999999999999999
Q ss_pred EEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEE---cCCCceEEeeccccc
Q 012213 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL---NSDFEAHVADFGLAK 333 (468)
Q Consensus 257 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfgla~ 333 (468)
+||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||+ +.++.+||+|||+++
T Consensus 103 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 177 (484)
T 3nyv_A 103 LVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLST 177 (484)
T ss_dssp EEECCCCSCBHHHHHHTC--SCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred EEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence 999999999999998643 35899999999999999999999887 9999999999999 567899999999998
Q ss_pred cccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchh
Q 012213 334 YLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVV 413 (468)
Q Consensus 334 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (468)
.+... .......||+.|+|||++.+ .++.++||||+||++|+|++|++||..... .+.........
T Consensus 178 ~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~~~~i~~~~----- 243 (484)
T 3nyv_A 178 HFEAS---KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE-----YDILKKVEKGK----- 243 (484)
T ss_dssp HBCCC---CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHCC-----
T ss_pred Ecccc---cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHcCC-----
Confidence 76532 22345579999999999876 699999999999999999999999976321 11111100000
Q ss_pred hhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 414 KILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 414 ~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.... ..........+.+++..|++.+|++|||+.|+++
T Consensus 244 --~~~~-~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 244 --YTFE-LPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp --CCCC-SGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --CCCC-CcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 0000 0001123456788999999999999999999986
No 203
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=5.2e-42 Score=334.02 Aligned_cols=251 Identities=26% Similarity=0.392 Sum_probs=197.6
Q ss_pred hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHH-HhCCCCCCccceeEEEecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRT-LGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
.+.|+..+.||+|+||+||+|.+ .+|+.||||++..... .....++..|+.. ++.++||||+++++++...+..++|
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 128 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN-SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 128 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCC-CHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccC-cHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEE
Confidence 45678889999999999999997 5789999999865432 2223445556655 7888999999999999999999999
Q ss_pred EeccCCCChhhhcccC--CCCCCCHHHHHHHHHHHHHHHHHhhhc-CCCCeeecCCCCCcEEEcCCCceEEeeccccccc
Q 012213 259 YEYMPNGSLGEVLHGK--RGSFLKWEMRLKIAIEAAKGLSYLHHD-CSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYL 335 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 335 (468)
|||+++ +|.+++... ....+++..+..++.||+.||+|||+. + |+||||||+||+++.++.+||+|||+++.+
T Consensus 129 ~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 129 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp ECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred HHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 999974 998888632 345699999999999999999999986 7 999999999999999999999999999876
Q ss_pred cccCCCccccccccCccccCccccC----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccc
Q 012213 336 QDTGASECMSAVAGSYGYIAPEYAY----TLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEG 411 (468)
Q Consensus 336 ~~~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (468)
... .......||+.|+|||++. ...++.++||||||+++|||+||+.||...... .....
T Consensus 205 ~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~---~~~~~---------- 268 (340)
T 3an0_A 205 VDS---VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP---FQQLK---------- 268 (340)
T ss_dssp SCH---HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCH---HHHHH----------
T ss_pred ccc---cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccch---HHHHH----------
Confidence 421 2223457899999999964 447899999999999999999999999753211 11111
Q ss_pred hhhhccccCCCC-CHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 412 VVKILDQRLSNT-PLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 412 ~~~~~d~~~~~~-~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
..+....... .......+.+++..|++.||++|||+.|+++
T Consensus 269 --~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 269 --QVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp --HHHHSCCCCCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred --HHhcCCCCCCCcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 1111111111 1223567889999999999999999999987
No 204
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=6e-42 Score=329.64 Aligned_cols=252 Identities=22% Similarity=0.283 Sum_probs=195.7
Q ss_pred hhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCC--CCCccceeEEEecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIR--HRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv 258 (468)
.+.|+..+.||+|+||.||++.+.+++.||||++..........+.+.+|+.++.+++ ||||+++++++...+..++|
T Consensus 27 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 106 (313)
T 3cek_A 27 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 106 (313)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEE
T ss_pred cceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEE
Confidence 4568889999999999999999988999999998654433334467899999999997 59999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
|| +.+++|.+++... ..+++..+..++.|++.||.|||+.+ |+||||||+||++++ +.+||+|||++..+...
T Consensus 107 ~e-~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~ 179 (313)
T 3cek_A 107 ME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD-GMLKLIDFGIANQMQPD 179 (313)
T ss_dssp EC-CCSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEET-TEEEECCCSSSCC----
T ss_pred Ee-cCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEEC-CeEEEeeccccccccCc
Confidence 99 5688999999754 35899999999999999999999887 999999999999965 89999999999876543
Q ss_pred CCCccccccccCccccCccccCC-----------CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcc
Q 012213 339 GASECMSAVAGSYGYIAPEYAYT-----------LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNS 407 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 407 (468)
..........||+.|+|||.+.+ ..++.++||||||+++|||++|+.||...... ...
T Consensus 180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~---~~~-------- 248 (313)
T 3cek_A 180 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ---ISK-------- 248 (313)
T ss_dssp ----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSH---HHH--------
T ss_pred cccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHH---HHH--------
Confidence 33323345578999999999865 46889999999999999999999999753211 111
Q ss_pred cccchhhhccccC-CCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 408 SKEGVVKILDQRL-SNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 408 ~~~~~~~~~d~~~-~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
....++... ...+......+.+++..|++.||++||++.|+++
T Consensus 249 ----~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 249 ----LHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp ----HHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ----HHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 111111111 1112222456788999999999999999999987
No 205
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.4e-41 Score=334.94 Aligned_cols=260 Identities=25% Similarity=0.324 Sum_probs=193.6
Q ss_pred hhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCC-----
Q 012213 180 ILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKE----- 253 (468)
Q Consensus 180 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 253 (468)
+.+.|+..+.||+|+||.||+|.+. +++.||||++............+.+|+.+++.++||||+++++++....
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 3577889999999999999999874 6889999998754333333466889999999999999999999997665
Q ss_pred -eeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q 012213 254 -TNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLA 332 (468)
Q Consensus 254 -~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla 332 (468)
..++||||++ |+|.+++.. .+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 103 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 174 (371)
T 2xrw_A 103 QDVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLA 174 (371)
T ss_dssp CEEEEEEECCS-EEHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC-
T ss_pred cceEEEEEcCC-CCHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEeecc
Confidence 6799999996 578888752 3889999999999999999999887 999999999999999999999999999
Q ss_pred ccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccc---
Q 012213 333 KYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSK--- 409 (468)
Q Consensus 333 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~--- 409 (468)
+..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+. ...|.........
T Consensus 175 ~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----~~~~~~i~~~~~~~~~ 247 (371)
T 2xrw_A 175 RTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH----IDQWNKVIEQLGTPCP 247 (371)
T ss_dssp ------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHC-CCCCCH
T ss_pred cccccc---cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHHHhCCCCH
Confidence 865421 223456789999999999999999999999999999999999999976331 1112211110000
Q ss_pred -------c---------------chhhhccccC-CCC---CHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 410 -------E---------------GVVKILDQRL-SNT---PLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 410 -------~---------------~~~~~~d~~~-~~~---~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
. ...+.+.... ... .......+.+++.+|++.||++|||++|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 318 (371)
T 2xrw_A 248 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ 318 (371)
T ss_dssp HHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence 0 0000010000 000 1223567889999999999999999999987
No 206
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.6e-41 Score=325.27 Aligned_cols=250 Identities=26% Similarity=0.353 Sum_probs=198.7
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 259 (468)
.+.|+..+.||+|+||.||+|.+. +|+.||||.+.... ....+.+|+.++..++||||+++++++...+..++||
T Consensus 28 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 103 (314)
T 3com_A 28 EEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM 103 (314)
T ss_dssp --CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence 567888899999999999999985 58999999986432 2366899999999999999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccC
Q 012213 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTG 339 (468)
Q Consensus 260 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 339 (468)
||+++++|.+++.. ....+++..+..++.+++.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 104 e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~- 178 (314)
T 3com_A 104 EYCGAGSVSDIIRL-RNKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT- 178 (314)
T ss_dssp ECCTTEEHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECBTT-
T ss_pred ecCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhhhhh-
Confidence 99999999999863 2345899999999999999999999887 999999999999999999999999999876432
Q ss_pred CCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcccc
Q 012213 340 ASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQR 419 (468)
Q Consensus 340 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 419 (468)
........|++.|+|||.+.+..++.++||||||+++|||++|+.||...... .......... ...
T Consensus 179 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~--------~~~ 244 (314)
T 3com_A 179 -MAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM-----RAIFMIPTNP--------PPT 244 (314)
T ss_dssp -BSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHHHHHSC--------CCC
T ss_pred -ccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHhcCC--------Ccc
Confidence 12234456899999999999989999999999999999999999999753211 1000000000 000
Q ss_pred CCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 420 LSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 420 ~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
...+......+.+++..|++.||++|||+.|+++
T Consensus 245 -~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 245 -FRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp -CSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -cCCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 1112223466888999999999999999999986
No 207
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=4.5e-41 Score=324.87 Aligned_cols=255 Identities=23% Similarity=0.319 Sum_probs=196.3
Q ss_pred hhhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCC------CCCchhHHHHHHHHHhCCCCCCccceeEEEec
Q 012213 179 DILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITK------GSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSN 251 (468)
Q Consensus 179 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 251 (468)
.+.+.|...+.||+|+||.||+|.+. +++.||||.+..... .......+.+|+.++++++||||+++++++..
T Consensus 7 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 86 (322)
T 2ycf_A 7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 86 (322)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES
T ss_pred hhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC
Confidence 44678889999999999999999874 578999999864321 11222458899999999999999999999876
Q ss_pred CCeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc---eEEee
Q 012213 252 KETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE---AHVAD 328 (468)
Q Consensus 252 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~D 328 (468)
.. .++||||+++|+|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+||+++.++. +||+|
T Consensus 87 ~~-~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 87 ED-YYIVLELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp SS-EEEEEECCTTEETHHHHST--TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEECC
T ss_pred Cc-eEEEEecCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEEcc
Confidence 55 8999999999999999864 345899999999999999999999887 999999999999987664 99999
Q ss_pred ccccccccccCCCccccccccCccccCccccC---CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhh
Q 012213 329 FGLAKYLQDTGASECMSAVAGSYGYIAPEYAY---TLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQT 405 (468)
Q Consensus 329 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 405 (468)
||++..... ........||+.|+|||++. ...++.++||||||+++|||++|+.||....... .+........
T Consensus 161 fg~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~ 236 (322)
T 2ycf_A 161 FGHSKILGE---TSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQITSGK 236 (322)
T ss_dssp CTTCEECCC---CHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS-CHHHHHHHTC
T ss_pred Cccceeccc---ccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH-HHHHHHHhCc
Confidence 999987542 12223456899999999863 5678899999999999999999999997643221 1221111100
Q ss_pred cccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 406 NSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 406 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.. ..... .......+.+++..|++.||++|||+.|+++
T Consensus 237 ~~---~~~~~--------~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 237 YN---FIPEV--------WAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp CC---CCHHH--------HTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cc---cCchh--------hhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 00 00000 0112456788999999999999999999975
No 208
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=5.6e-42 Score=327.99 Aligned_cols=253 Identities=21% Similarity=0.288 Sum_probs=197.9
Q ss_pred hhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213 180 ILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 180 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
..+.|+..+.||+|+||.||+|.+. +++.||+|.+.... ......+.+|+.++..++||||+++++++...+..++|
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 94 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM 94 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC--HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEE
Confidence 3677889999999999999999985 58899999986433 23346789999999999999999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
|||+++++|.+++... ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 95 ~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 170 (302)
T 2j7t_A 95 IEFCPGGAVDAIMLEL-DRGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT 170 (302)
T ss_dssp EECCTTEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH
T ss_pred EEeCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCcccccc
Confidence 9999999999988642 335899999999999999999999887 999999999999999999999999998643211
Q ss_pred CCCccccccccCccccCcccc-----CCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchh
Q 012213 339 GASECMSAVAGSYGYIAPEYA-----YTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVV 413 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (468)
........||+.|+|||++ ....++.++||||||+++|||++|+.||..... ...........
T Consensus 171 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~----- 238 (302)
T 2j7t_A 171 --LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-----MRVLLKIAKSD----- 238 (302)
T ss_dssp --HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH-----HHHHHHHHHSC-----
T ss_pred --ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH-----HHHHHHHhccC-----
Confidence 1112345689999999987 466789999999999999999999999975331 11111110000
Q ss_pred hhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 414 KILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 414 ~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
......+......+.+++..|++.||++|||+.|+++
T Consensus 239 ----~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 239 ----PPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp ----CCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred ----CcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0001112234456888999999999999999999976
No 209
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.3e-41 Score=358.61 Aligned_cols=250 Identities=24% Similarity=0.283 Sum_probs=204.0
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCC-CCCchhHHHHHHHHHhCC-CCCCccceeEEEecCCeeEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITK-GSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLL 257 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 257 (468)
.++|+..+.||+|+||.||+|.+. +++.||||++..... .......+..|..++..+ +||+|+++++++.+.+..++
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l 419 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 419 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence 456888899999999999999975 578899999864321 222335678899999988 79999999999999999999
Q ss_pred EEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccc
Q 012213 258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQD 337 (468)
Q Consensus 258 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 337 (468)
||||+++|+|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+|||++.++++||+|||+++....
T Consensus 420 V~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 494 (674)
T 3pfq_A 420 VMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494 (674)
T ss_dssp EEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred EEeCcCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence 99999999999999753 35899999999999999999999887 99999999999999999999999999986432
Q ss_pred cCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcc
Q 012213 338 TGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILD 417 (468)
Q Consensus 338 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 417 (468)
. ........||+.|+|||++.+..++.++|||||||++|||++|+.||.+.+. .+. ...+..
T Consensus 495 ~--~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~-----~~~-----------~~~i~~ 556 (674)
T 3pfq_A 495 D--GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-----DEL-----------FQSIME 556 (674)
T ss_dssp T--TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHH-----------HHHHHS
T ss_pred C--CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH-----HHH-----------HHHHHh
Confidence 2 2234567899999999999999999999999999999999999999976321 111 111111
Q ss_pred ccCCCCCHHHHHHHHHHHHhhcccCCCCCCCH-----HHHHH
Q 012213 418 QRLSNTPLSEAMQVFFVAMLCVQEHGVERPTM-----REVVQ 454 (468)
Q Consensus 418 ~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~-----~ev~~ 454 (468)
.. ...+......+.+++..|++.||++||++ +||++
T Consensus 557 ~~-~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 557 HN-VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp SC-CCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred CC-CCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 11 12233445678889999999999999998 66654
No 210
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-41 Score=328.96 Aligned_cols=267 Identities=21% Similarity=0.287 Sum_probs=197.0
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCC---CchhHHHHHHHHHhCCCCCCccceeEEEecCCeeE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGS---SHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNL 256 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 256 (468)
.+.|+..+.||+|+||.||+|.+. +|+.||||++....... .....+.+|+.+++.++||||+++++++.+.+..+
T Consensus 9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 88 (346)
T 1ua2_A 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS 88 (346)
T ss_dssp ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceE
Confidence 567888999999999999999985 58999999986432211 11246889999999999999999999999999999
Q ss_pred EEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccc
Q 012213 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQ 336 (468)
Q Consensus 257 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~ 336 (468)
+||||+++ +|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.+.
T Consensus 89 lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (346)
T 1ua2_A 89 LVFDFMET-DLEVIIKDN-SLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFG 163 (346)
T ss_dssp EEEECCSE-EHHHHHTTC-CSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGSTTT
T ss_pred EEEEcCCC-CHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEecccceecc
Confidence 99999975 888888643 345888999999999999999999888 9999999999999999999999999998764
Q ss_pred ccCCCccccccccCccccCccccCCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchh--
Q 012213 337 DTGASECMSAVAGSYGYIAPEYAYTL-KVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVV-- 413 (468)
Q Consensus 337 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 413 (468)
... .......||+.|+|||.+.+. .++.++|||||||++|||++|.+||.+.... ..+............+...
T Consensus 164 ~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~ 240 (346)
T 1ua2_A 164 SPN--RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL-DQLTRIFETLGTPTEEQWPDM 240 (346)
T ss_dssp SCC--CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCTTTSSST
T ss_pred CCc--ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHcCCCChhhhhhh
Confidence 322 223456789999999998654 5889999999999999999999998753211 0111111110000000000
Q ss_pred -hhcc----ccCCCCC-----HHHHHHHHHHHHhhcccCCCCCCCHHHHHHH
Q 012213 414 -KILD----QRLSNTP-----LSEAMQVFFVAMLCVQEHGVERPTMREVVQM 455 (468)
Q Consensus 414 -~~~d----~~~~~~~-----~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~ 455 (468)
...+ ......+ ......+.+++..|++.||++|||+.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 241 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000 0001111 1234678899999999999999999999873
No 211
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=3.5e-42 Score=361.88 Aligned_cols=258 Identities=23% Similarity=0.326 Sum_probs=203.1
Q ss_pred hhccCCcceEcccCCcceEEEEcCC----CcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPN----GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNL 256 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 256 (468)
.+.|+..+.||+|+||.||+|.+.. +..||||++.... .....+.+.+|+.++++++||||+++++++. .+..+
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~ 466 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT-SDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 466 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTT-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceE
Confidence 4567778999999999999998743 4579999875432 2222367899999999999999999999985 45689
Q ss_pred EEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccc
Q 012213 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQ 336 (468)
Q Consensus 257 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~ 336 (468)
+||||+++|+|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 467 lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a~~~~ 542 (656)
T 2j0j_A 467 IIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYME 542 (656)
T ss_dssp EEEECCTTCBHHHHHHHT-TTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCCCSCC
T ss_pred EEEEcCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCCeecC
Confidence 999999999999999743 345899999999999999999999887 9999999999999999999999999998765
Q ss_pred ccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhhh
Q 012213 337 DTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKI 415 (468)
Q Consensus 337 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (468)
... ........+|+.|+|||.+.+..++.++||||||+++|||++ |..||.+.... +.. ..+
T Consensus 543 ~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~-----~~~-----------~~i 605 (656)
T 2j0j_A 543 DST-YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN-----DVI-----------GRI 605 (656)
T ss_dssp C-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-----HHH-----------HHH
T ss_pred CCc-ceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH-----HHH-----------HHH
Confidence 322 222234456789999999998899999999999999999997 99999763311 111 111
Q ss_pred ccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccC
Q 012213 416 LDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQK 461 (468)
Q Consensus 416 ~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 461 (468)
........+......+.+++..||+.||++|||+.|+++.|+++..
T Consensus 606 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 606 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp HHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HcCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 1111122233445678889999999999999999999999998753
No 212
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=2.7e-41 Score=326.88 Aligned_cols=266 Identities=21% Similarity=0.258 Sum_probs=202.0
Q ss_pred hhccCCcceEcccCCcceEEEEc--CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCC---CCCCccceeEEEe-----
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT--PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKI---RHRNIVRLKAFCS----- 250 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~----- 250 (468)
.+.|+..+.||+|+||.||+|.+ .+|+.||||++............+.+|+.+++.+ +||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~ 89 (326)
T 1blx_A 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 89 (326)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccC
Confidence 46788899999999999999997 4678899999875443333334577788777666 8999999999987
Q ss_pred cCCeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecc
Q 012213 251 NKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFG 330 (468)
Q Consensus 251 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 330 (468)
.....++||||++ |+|.+++.......+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 90 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl~Dfg 165 (326)
T 1blx_A 90 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFG 165 (326)
T ss_dssp SEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECSCC
T ss_pred CCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEEecCc
Confidence 5567899999997 69999998666666999999999999999999999887 9999999999999999999999999
Q ss_pred ccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhccccc
Q 012213 331 LAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKE 410 (468)
Q Consensus 331 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 410 (468)
+++..... .......||..|+|||++.+..++.++||||||+++|||++|+.||...... ..+............+
T Consensus 166 ~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~ 241 (326)
T 1blx_A 166 LARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILDVIGLPGEE 241 (326)
T ss_dssp SCCCCCGG---GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCGG
T ss_pred ccccccCC---CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHHHcCCCCcc
Confidence 99865422 2234567899999999999989999999999999999999999999763211 0000110000000000
Q ss_pred chh-------hhcc----ccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 411 GVV-------KILD----QRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 411 ~~~-------~~~d----~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
... ..+. .............+.+++.+|++.||++|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp GSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000 0000 0001111233456788999999999999999999985
No 213
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-41 Score=329.11 Aligned_cols=251 Identities=26% Similarity=0.394 Sum_probs=195.1
Q ss_pred hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCC-CCCCccceeEEEec------C
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSN------K 252 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~------~ 252 (468)
.+.|+..+.||+|+||.||+|.+ .+++.||||++.... .....+.+|+.++.++ +||||+++++++.. .
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~ 99 (326)
T 2x7f_A 23 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG---DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 99 (326)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc---ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcccc
Confidence 67788999999999999999998 478999999986432 2236789999999998 79999999999976 4
Q ss_pred CeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q 012213 253 ETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLA 332 (468)
Q Consensus 253 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla 332 (468)
...++||||+++|+|.+++.......+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~ 176 (326)
T 2x7f_A 100 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVS 176 (326)
T ss_dssp CEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCTTT
T ss_pred ceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCCEEEeeCcCc
Confidence 67899999999999999998665567899999999999999999999887 999999999999999999999999999
Q ss_pred ccccccCCCccccccccCccccCccccC-----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcc
Q 012213 333 KYLQDTGASECMSAVAGSYGYIAPEYAY-----TLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNS 407 (468)
Q Consensus 333 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 407 (468)
....... .......||+.|+|||++. +..++.++||||||+++|||++|+.||...... .-.......
T Consensus 177 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~ 249 (326)
T 2x7f_A 177 AQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM-----RALFLIPRN 249 (326)
T ss_dssp C---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHHHHHS
T ss_pred eecCcCc--cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHH-----HHHHHhhcC
Confidence 8664221 1223456899999999986 567889999999999999999999999653311 000000000
Q ss_pred cccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 408 SKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 408 ~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
. .... ........+.+++..|++.||++||++.|+++
T Consensus 250 ~--------~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 250 P--------APRL--KSKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp C--------CCCC--SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred c--------cccC--CccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 0 0001 11123456788999999999999999999987
No 214
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=2.6e-41 Score=339.01 Aligned_cols=201 Identities=25% Similarity=0.302 Sum_probs=172.7
Q ss_pred chhhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCC------CCCCccceeEEEe
Q 012213 178 DDILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKI------RHRNIVRLKAFCS 250 (468)
Q Consensus 178 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l------~h~niv~l~~~~~ 250 (468)
+.+..+|+..+.||+|+||+||+|.+. +++.||||++... ......+..|+.++..+ .|+||+++++++.
T Consensus 93 ~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~ 169 (429)
T 3kvw_A 93 DHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE---KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFT 169 (429)
T ss_dssp CEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEE
T ss_pred CcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc---cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecc
Confidence 344567889999999999999999875 5889999998632 12234567788777666 5779999999999
Q ss_pred cCCeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc--eEEee
Q 012213 251 NKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE--AHVAD 328 (468)
Q Consensus 251 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~--~kl~D 328 (468)
.....++||||+. ++|.+++.......+++..+..++.||+.||+|||+.+ |+||||||+|||++.++. +||+|
T Consensus 170 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~D 245 (429)
T 3kvw_A 170 FRNHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVID 245 (429)
T ss_dssp ETTEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECC
T ss_pred cCCeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEee
Confidence 9999999999995 79999998766667999999999999999999999888 999999999999999987 99999
Q ss_pred ccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Q 012213 329 FGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDF 390 (468)
Q Consensus 329 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~ 390 (468)
||+++.... ......||+.|+|||++.+..++.++|||||||++|||+||++||...
T Consensus 246 FG~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 246 FGSSCYEHQ-----RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp CTTCEETTC-----CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccceecCC-----cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 999975432 123457899999999999999999999999999999999999999764
No 215
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=5.3e-42 Score=336.93 Aligned_cols=263 Identities=23% Similarity=0.326 Sum_probs=183.8
Q ss_pred hhhhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecC-----
Q 012213 179 DILECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNK----- 252 (468)
Q Consensus 179 ~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----- 252 (468)
++.++|+..+.||+|+||.||+|.+ .+|+.||||++............+.+|+.+++.++||||+++++++...
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 105 (367)
T 2fst_X 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEE 105 (367)
T ss_dssp EEETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGG
T ss_pred CCCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCcccc
Confidence 4457888999999999999999986 5688999999865433333346788999999999999999999998654
Q ss_pred -CeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q 012213 253 -ETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGL 331 (468)
Q Consensus 253 -~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl 331 (468)
...++|+||+ +++|.+++.. ..+++..+..++.||++||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 106 ~~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG~ 178 (367)
T 2fst_X 106 FNDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGL 178 (367)
T ss_dssp CCCCEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC---
T ss_pred CCeEEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeeccc
Confidence 5679999999 7899998864 35899999999999999999999887 99999999999999999999999999
Q ss_pred cccccccCCCccccccccCccccCccccCC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhccccc
Q 012213 332 AKYLQDTGASECMSAVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKE 410 (468)
Q Consensus 332 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 410 (468)
++..... .....||..|+|||++.+ ..++.++|||||||++|||++|+.||.+.+.. ..+............+
T Consensus 179 a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p~~~ 252 (367)
T 2fst_X 179 ARHTADE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPGAE 252 (367)
T ss_dssp -----------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSCCHH
T ss_pred ccccccc-----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHH
Confidence 9865421 234678999999999876 67899999999999999999999999763311 0011111100000000
Q ss_pred --------chhhhcccc--CCCCC-----HHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 411 --------GVVKILDQR--LSNTP-----LSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 411 --------~~~~~~d~~--~~~~~-----~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.....+... ..... ......+.+++.+|+..||++|||+.|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 253 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp HHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 000111000 00111 112356788999999999999999999986
No 216
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=4.4e-41 Score=319.55 Aligned_cols=260 Identities=24% Similarity=0.303 Sum_probs=206.6
Q ss_pred chhhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeE
Q 012213 178 DDILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNL 256 (468)
Q Consensus 178 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 256 (468)
..+.+.|+..+.||+|+||.||+|.+. +++.||||++............+.+|+.++++++||||+++++++......+
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence 455778999999999999999999985 6899999998765544455577999999999999999999999999999999
Q ss_pred EEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC---CceEEeeccccc
Q 012213 257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD---FEAHVADFGLAK 333 (468)
Q Consensus 257 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfgla~ 333 (468)
+|+||+++++|.+++... ..+++..+..++.||+.||.|||+.+ ++||||||+||+++.+ +.+||+|||++.
T Consensus 98 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~ 172 (287)
T 2wei_A 98 IVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (287)
T ss_dssp EEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred EEEEccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCcce
Confidence 999999999999988643 34899999999999999999999887 9999999999999764 469999999998
Q ss_pred cccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchh
Q 012213 334 YLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVV 413 (468)
Q Consensus 334 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (468)
...... ......|++.|+|||.+.+ .++.++||||||+++|+|++|+.||..... .+.........
T Consensus 173 ~~~~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~~~~~~~~~~----- 238 (287)
T 2wei_A 173 CFQQNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE-----YDILKRVETGK----- 238 (287)
T ss_dssp TBCCCS---SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHCC-----
T ss_pred eecCCC---ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHcCC-----
Confidence 664221 1233458899999998876 489999999999999999999999975321 11111111000
Q ss_pred hhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH--HHHhc
Q 012213 414 KILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ--MLAQA 459 (468)
Q Consensus 414 ~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~--~L~~~ 459 (468)
..... .........+.+++..|++.||++|||+.|+++ .+++.
T Consensus 239 --~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 283 (287)
T 2wei_A 239 --YAFDL-PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY 283 (287)
T ss_dssp --CCCCS-GGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred --CCCCc-hhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence 00000 000123456788999999999999999999997 45544
No 217
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.3e-41 Score=325.40 Aligned_cols=269 Identities=26% Similarity=0.398 Sum_probs=186.1
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 259 (468)
.+.|+..+.||+|+||.||+|.+. +++.||||++..... ......+.+|+.++++++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC-QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVM 92 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEESSSCEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc-chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEe
Confidence 457888899999999999999874 688999998754322 222356889999999999999999999999999999999
Q ss_pred eccCCCChhhhccc------CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q 012213 260 EYMPNGSLGEVLHG------KRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAK 333 (468)
Q Consensus 260 e~~~~gsL~~~l~~------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~ 333 (468)
||+++++|.+++.. .....+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+|||++.
T Consensus 93 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 169 (303)
T 2vwi_A 93 KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVSA 169 (303)
T ss_dssp ECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCHHHH
T ss_pred hhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEeccchh
Confidence 99999999999863 12346899999999999999999999887 9999999999999999999999999998
Q ss_pred cccccCC---CccccccccCccccCccccCC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccc
Q 012213 334 YLQDTGA---SECMSAVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSK 409 (468)
Q Consensus 334 ~~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 409 (468)
....... ........||+.|+|||.+.+ ..++.++||||||+++|||++|+.||....... .. .. ......
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~--~~-~~~~~~ 244 (303)
T 2vwi_A 170 FLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK--VL--ML-TLQNDP 244 (303)
T ss_dssp HCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG--HH--HH-HHTSSC
T ss_pred eeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh--HH--HH-HhccCC
Confidence 7643221 112234568999999998865 568999999999999999999999997643221 11 00 111110
Q ss_pred cchh-hhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH--HHHhccC
Q 012213 410 EGVV-KILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ--MLAQAQK 461 (468)
Q Consensus 410 ~~~~-~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~--~L~~~~~ 461 (468)
.... ...+... .......+.+++..|++.||++|||+.|+++ .+.+.+.
T Consensus 245 ~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~ 296 (303)
T 2vwi_A 245 PSLETGVQDKEM---LKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKN 296 (303)
T ss_dssp CCTTC-----CC---CCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC-----
T ss_pred Cccccccccchh---hhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcCCC
Confidence 0110 0111111 1123356778999999999999999999987 4444443
No 218
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=4.3e-41 Score=334.31 Aligned_cols=262 Identities=20% Similarity=0.178 Sum_probs=201.1
Q ss_pred hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCC--------CCCccceeEEEe-
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIR--------HRNIVRLKAFCS- 250 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~--------h~niv~l~~~~~- 250 (468)
.++|+..+.||+|+||+||+|.+ .+++.||||++... ....+.+.+|+.+++.++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~ 112 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA---EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI 112 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC---CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee
Confidence 46788899999999999999987 46789999998532 223356889999998885 788999999987
Q ss_pred ---cCCeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhc-CCCCeeecCCCCCcEEEcCCC----
Q 012213 251 ---NKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHD-CSPLIIHRDVKSNNILLNSDF---- 322 (468)
Q Consensus 251 ---~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~dlk~~Nill~~~~---- 322 (468)
.....++||||+ +++|.+++.......+++..+..++.||+.||+|||+. + |+||||||+|||++.++
T Consensus 113 ~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~~~~~ 188 (397)
T 1wak_A 113 SGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNEQYIR 188 (397)
T ss_dssp EETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCHHHHH
T ss_pred cCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccchhhh
Confidence 556789999999 66777776655555699999999999999999999987 7 99999999999999775
Q ss_pred ---------------------------------------------ceEEeeccccccccccCCCccccccccCccccCcc
Q 012213 323 ---------------------------------------------EAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPE 357 (468)
Q Consensus 323 ---------------------------------------------~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE 357 (468)
.+||+|||++...... .....||+.|+|||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE 263 (397)
T 1wak_A 189 RLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLE 263 (397)
T ss_dssp HHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHH
T ss_pred hhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCCh
Confidence 7999999999876422 23457899999999
Q ss_pred ccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcC--HHHHHHH--hhccccc-------chhhhccc--------
Q 012213 358 YAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLD--IVQWTKM--QTNSSKE-------GVVKILDQ-------- 418 (468)
Q Consensus 358 ~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~--~~~~~~~--~~~~~~~-------~~~~~~d~-------- 418 (468)
++.+..++.++|||||||++|||+||+.||......... ....... ....... .....+..
T Consensus 264 ~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 343 (397)
T 1wak_A 264 VLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHIT 343 (397)
T ss_dssp HHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCC
T ss_pred hhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccccc
Confidence 999989999999999999999999999999764432211 0000000 0000000 00000000
Q ss_pred ------------cCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 419 ------------RLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 419 ------------~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.....+......+.+++.+|++.||++|||+.|+++
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 344 KLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred ccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 001234667788999999999999999999999985
No 219
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.1e-41 Score=332.40 Aligned_cols=260 Identities=22% Similarity=0.285 Sum_probs=193.8
Q ss_pred hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecC-------
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNK------- 252 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------- 252 (468)
.++|+..+.||+|+||+||+|.+ .+|+.||||++..... ...+|+.+++.++||||+++++++...
T Consensus 6 ~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred cceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc------hHHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 56788899999999999999987 5789999999864322 234799999999999999999998443
Q ss_pred -------------------------------CeeEEEEeccCCCChhhhccc--CCCCCCCHHHHHHHHHHHHHHHHHhh
Q 012213 253 -------------------------------ETNLLVYEYMPNGSLGEVLHG--KRGSFLKWEMRLKIAIEAAKGLSYLH 299 (468)
Q Consensus 253 -------------------------------~~~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~~l~~LH 299 (468)
...++||||++ |+|.+.+.. .....+++..+..++.||++||+|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp ------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 33789999997 588777753 23456999999999999999999999
Q ss_pred hcCCCCeeecCCCCCcEEEc-CCCceEEeeccccccccccCCCccccccccCccccCccccCCC-CCCcchhhHHHHHHH
Q 012213 300 HDCSPLIIHRDVKSNNILLN-SDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTL-KVDEKSDVYSFGVVL 377 (468)
Q Consensus 300 ~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l 377 (468)
+.+ |+||||||+||+++ .++.+||+|||+++.+.... ......||+.|+|||.+.+. .++.++||||+||++
T Consensus 159 ~~g---i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 232 (383)
T 3eb0_A 159 SLG---ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE---PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232 (383)
T ss_dssp TTT---EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS---CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred HCc---CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC---CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence 777 99999999999998 68899999999998764322 23445689999999988765 489999999999999
Q ss_pred HHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhh-------ccccCCC------CCHHHHHHHHHHHHhhcccCCC
Q 012213 378 LELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKI-------LDQRLSN------TPLSEAMQVFFVAMLCVQEHGV 444 (468)
Q Consensus 378 ~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~~~------~~~~~~~~~~~l~~~c~~~~P~ 444 (468)
|||++|+.||.+.... ..+............+.+... .-+.... .+......+.+++.+|++.||+
T Consensus 233 ~ell~g~~pf~~~~~~-~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 311 (383)
T 3eb0_A 233 GELILGKPLFSGETSI-DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPD 311 (383)
T ss_dssp HHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGG
T ss_pred HHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChh
Confidence 9999999999763311 111111111111100000000 0000000 1122345688999999999999
Q ss_pred CCCCHHHHHH
Q 012213 445 ERPTMREVVQ 454 (468)
Q Consensus 445 ~RPt~~ev~~ 454 (468)
+|||+.|+++
T Consensus 312 ~R~t~~e~l~ 321 (383)
T 3eb0_A 312 LRINPYEAMA 321 (383)
T ss_dssp GSCCHHHHHT
T ss_pred hCCCHHHHhc
Confidence 9999999985
No 220
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=4.8e-41 Score=330.08 Aligned_cols=266 Identities=20% Similarity=0.253 Sum_probs=193.8
Q ss_pred hhhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCc---------hhHHHHHHHHHhCCCCCCccceeEEEe
Q 012213 180 ILECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSH---------DNGLSAEIRTLGKIRHRNIVRLKAFCS 250 (468)
Q Consensus 180 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~---------~~~~~~e~~~l~~l~h~niv~l~~~~~ 250 (468)
+.+.|+..+.||+|+||.||+|.+.+|+.||||++......... .+.+.+|+.++++++||||+++++++.
T Consensus 20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 99 (362)
T 3pg1_A 20 MQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFV 99 (362)
T ss_dssp TTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEE
T ss_pred hccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEE
Confidence 36778899999999999999999988999999998654332221 256899999999999999999999984
Q ss_pred c-----CCeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceE
Q 012213 251 N-----KETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAH 325 (468)
Q Consensus 251 ~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 325 (468)
. ....++||||++ |+|.+++... ...+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+|
T Consensus 100 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~k 174 (362)
T 3pg1_A 100 HFEEPAMHKLYLVTELMR-TDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNNDIT 174 (362)
T ss_dssp ECCTTTCCEEEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEE
T ss_pred eccCCCcceEEEEEccCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHEEEcCCCCEE
Confidence 3 335799999997 6888888743 346899999999999999999999887 99999999999999999999
Q ss_pred EeeccccccccccCCCccccccccCccccCccccCC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHh
Q 012213 326 VADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQ 404 (468)
Q Consensus 326 l~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 404 (468)
|+|||+++..... .......||+.|+|||++.+ ..++.++||||||+++|||++|+.||....... .+.......
T Consensus 175 l~Dfg~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~ 250 (362)
T 3pg1_A 175 ICDFNLAREDTAD---ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN-QLNKIVEVV 250 (362)
T ss_dssp ECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHH
T ss_pred EEecCcccccccc---cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHc
Confidence 9999999754322 22344578999999998876 678999999999999999999999997632110 000000000
Q ss_pred hccc--------ccchhhhccccCCC--------CCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 405 TNSS--------KEGVVKILDQRLSN--------TPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 405 ~~~~--------~~~~~~~~d~~~~~--------~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.... .....+.+...... ........+.+++..|++.||++|||+.|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 251 GTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp CCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 0000 00011111111110 01122456789999999999999999999987
No 221
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1e-41 Score=331.15 Aligned_cols=258 Identities=24% Similarity=0.306 Sum_probs=184.4
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCC-CCCccceeEEEe--------
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIR-HRNIVRLKAFCS-------- 250 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~-------- 250 (468)
..+|+..+.||+|+||.||+|.+. +++.||||++.... ......+.+|+.++.++. ||||+++++++.
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 104 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE--EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT 104 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS--HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc--hHHHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence 346888899999999999999974 68999999885332 233356889999999996 999999999984
Q ss_pred cCCeeEEEEeccCCCChhhhccc-CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeec
Q 012213 251 NKETNLLVYEYMPNGSLGEVLHG-KRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADF 329 (468)
Q Consensus 251 ~~~~~~lv~e~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 329 (468)
.....++||||++ |+|.+++.. .....+++..++.++.||+.||+|||+.+ ++|+||||||+||+++.++.+||+||
T Consensus 105 ~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 105 GQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp SSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred CCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecC
Confidence 3344789999995 799998864 22346999999999999999999999543 23999999999999999999999999
Q ss_pred cccccccccCCCc----------cccccccCccccCcccc---CCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcC
Q 012213 330 GLAKYLQDTGASE----------CMSAVAGSYGYIAPEYA---YTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLD 396 (468)
Q Consensus 330 gla~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~ 396 (468)
|+++......... ......||+.|+|||++ .+..++.++||||||+++|||+||+.||.......
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-- 260 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR-- 260 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH--
Confidence 9998765322111 11244589999999998 56678999999999999999999999996532110
Q ss_pred HHHHHHHhhcccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccC
Q 012213 397 IVQWTKMQTNSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQK 461 (468)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~ 461 (468)
. ....... .........+.+++..|++.||++|||+.|+++.|+.+..
T Consensus 261 ---~-----------~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~ 308 (337)
T 3ll6_A 261 ---I-----------VNGKYSI---PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA 308 (337)
T ss_dssp -------------------CCC---CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---h-----------hcCcccC---CcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 0 0000000 0011122346789999999999999999999999987753
No 222
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.3e-41 Score=335.15 Aligned_cols=254 Identities=12% Similarity=0.038 Sum_probs=180.7
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCC-CchhHHHHH---HHHHhCCCCCCcccee-------EE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGS-SHDNGLSAE---IRTLGKIRHRNIVRLK-------AF 248 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~e---~~~l~~l~h~niv~l~-------~~ 248 (468)
...|+..+.||+|+||+||+|.+. +|+.||||++....... .....+.+| +..++. +|||+++++ ++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~ 139 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDA 139 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehh
Confidence 345778899999999999999974 78999999997644322 223456777 556666 799987754 55
Q ss_pred EecC-----------------CeeEEEEeccCCCChhhhcccCCCCCCCHHHH------HHHHHHHHHHHHHhhhcCCCC
Q 012213 249 CSNK-----------------ETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMR------LKIAIEAAKGLSYLHHDCSPL 305 (468)
Q Consensus 249 ~~~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~------~~i~~~ia~~l~~LH~~~~~~ 305 (468)
+..+ ...++||||++ |+|.+++.... ..+++..+ ..++.||+.||+|||+.+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~--- 214 (371)
T 3q60_A 140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAANLQSKG--- 214 (371)
T ss_dssp EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT---
T ss_pred eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHHHHHHCC---
Confidence 5433 23799999998 89999997532 23455666 788899999999999887
Q ss_pred eeecCCCCCcEEEcCCCceEEeeccccccccccCCCccccccccCccccCccccCC--CCCCcchhhHHHHHHHHHHHhC
Q 012213 306 IIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYT--LKVDEKSDVYSFGVVLLELITG 383 (468)
Q Consensus 306 ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~G~~l~elltg 383 (468)
|+||||||+|||++.++.+||+|||+++.... ......+|+.|+|||++.+ ..++.++|||||||++|||+||
T Consensus 215 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg 289 (371)
T 3q60_A 215 LVHGHFTPDNLFIMPDGRLMLGDVSALWKVGT-----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCL 289 (371)
T ss_dssp EEETTCSGGGEEECTTSCEEECCGGGEEETTC-----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHS
T ss_pred CccCcCCHHHEEECCCCCEEEEecceeeecCC-----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhC
Confidence 99999999999999999999999999986532 1123456799999999987 6799999999999999999999
Q ss_pred CCCCCCCCCCCcCHHHHHHHhhcccccchhhhccccC-CCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 384 RRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQRL-SNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 384 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
+.||......... .|.. ........... ..........+.+++.+|++.||++|||+.|+++
T Consensus 290 ~~Pf~~~~~~~~~--~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 290 FLPFGLVTPGIKG--SWKR-------PSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp SCSTTBCCTTCTT--CCCB-------CCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCCCcCccccc--chhh-------hhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 9999764321110 0000 00000001111 1111234567888999999999999999999975
No 223
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=4.4e-41 Score=333.83 Aligned_cols=261 Identities=24% Similarity=0.297 Sum_probs=193.3
Q ss_pred hhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCe------
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKET------ 254 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~------ 254 (468)
...|+..+.||+|+||+||+|.+.++..||+|++..... ...+|+.+++.++||||+++++++.....
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~ 112 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVF 112 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceE
Confidence 456888999999999999999998888899999864322 12369999999999999999999865433
Q ss_pred eEEEEeccCCCChhhhcc-cCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc-CCCceEEeecccc
Q 012213 255 NLLVYEYMPNGSLGEVLH-GKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLN-SDFEAHVADFGLA 332 (468)
Q Consensus 255 ~~lv~e~~~~gsL~~~l~-~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfgla 332 (468)
.++||||++++.+....+ ......+++..+..++.||++||+|||+.+ |+||||||+|||++ .++.+||+|||++
T Consensus 113 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a 189 (394)
T 4e7w_A 113 LNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSA 189 (394)
T ss_dssp EEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred EEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCc
Confidence 689999998654433322 122346899999999999999999999887 99999999999999 7999999999999
Q ss_pred ccccccCCCccccccccCccccCccccCCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccc
Q 012213 333 KYLQDTGASECMSAVAGSYGYIAPEYAYTL-KVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEG 411 (468)
Q Consensus 333 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (468)
+.+.... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||.+.+.. ..+............+.
T Consensus 190 ~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p~~~~ 265 (394)
T 4e7w_A 190 KILIAGE---PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI-DQLVEIIKVLGTPSREQ 265 (394)
T ss_dssp EECCTTC---CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHH
T ss_pred ccccCCC---CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHH
Confidence 8764222 22345789999999988764 5899999999999999999999999763311 11111111111100000
Q ss_pred hhh----hccccC---CCC------CHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 412 VVK----ILDQRL---SNT------PLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 412 ~~~----~~d~~~---~~~------~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
+.. ..+..+ ... .......+.+++.+|++.||++|||+.|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 266 IKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 000 000000 001 1123457889999999999999999999987
No 224
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=9.1e-41 Score=329.10 Aligned_cols=262 Identities=22% Similarity=0.291 Sum_probs=196.9
Q ss_pred hhhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCee--
Q 012213 179 DILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETN-- 255 (468)
Q Consensus 179 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~-- 255 (468)
++.+.|...+.||+|+||+||+|.+. +|+.||||++............+.+|+.+++.++||||+++++++...+..
T Consensus 39 ~l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 118 (371)
T 4exu_A 39 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRN 118 (371)
T ss_dssp EEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTT
T ss_pred cccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccc
Confidence 34577888999999999999999874 688999999875443333346788999999999999999999999877765
Q ss_pred ----EEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q 012213 256 ----LLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGL 331 (468)
Q Consensus 256 ----~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl 331 (468)
++||||++ ++|.+++.. .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 119 ~~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~ 190 (371)
T 4exu_A 119 FYDFYLVMPFMQ-TDLQKIMGM----EFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGL 190 (371)
T ss_dssp CCCCEEEEECCC-EEHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTTC
T ss_pred ceeEEEEEcccc-ccHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecCc
Confidence 99999997 688888742 3899999999999999999999887 99999999999999999999999999
Q ss_pred cccccccCCCccccccccCccccCccccCC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhccccc
Q 012213 332 AKYLQDTGASECMSAVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKE 410 (468)
Q Consensus 332 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 410 (468)
++..... .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||...+.. ..+............+
T Consensus 191 a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~ 264 (371)
T 4exu_A 191 ARHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTGVPGTE 264 (371)
T ss_dssp C-------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCHH
T ss_pred ccccccC-----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCcHH
Confidence 9865421 234568999999999877 67999999999999999999999999763211 0011111000000000
Q ss_pred c--------hhhhcc---ccCCC----CCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 411 G--------VVKILD---QRLSN----TPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 411 ~--------~~~~~d---~~~~~----~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
. ...... ..... ........+.+++..|++.||++|||+.|+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 265 FVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp HHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 0 000000 00000 01123467889999999999999999999987
No 225
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=9.3e-41 Score=318.89 Aligned_cols=255 Identities=26% Similarity=0.311 Sum_probs=202.6
Q ss_pred hhhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCC-------CchhHHHHHHHHHhCCC-CCCccceeEEE
Q 012213 179 DILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGS-------SHDNGLSAEIRTLGKIR-HRNIVRLKAFC 249 (468)
Q Consensus 179 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~~~e~~~l~~l~-h~niv~l~~~~ 249 (468)
.+.++|+..+.||+|+||.||+|.+. +|+.||||.+....... ...+.+.+|+.++.+++ ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 34678889999999999999999985 68899999986543211 11245788999999995 99999999999
Q ss_pred ecCCeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeec
Q 012213 250 SNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADF 329 (468)
Q Consensus 250 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 329 (468)
......++||||+++++|.+++... ..+++..+..++.||+.||.|||+.+ ++||||||+||+++.++.+||+||
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~df 168 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDF 168 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCC
T ss_pred ccCCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEecc
Confidence 9999999999999999999999643 35899999999999999999999887 999999999999999999999999
Q ss_pred cccccccccCCCccccccccCccccCccccC------CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHH
Q 012213 330 GLAKYLQDTGASECMSAVAGSYGYIAPEYAY------TLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKM 403 (468)
Q Consensus 330 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~ 403 (468)
|++...... .......|++.|+|||++. ...++.++||||||+++|||++|+.||..... ......
T Consensus 169 g~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~~~~~ 240 (298)
T 1phk_A 169 GFSCQLDPG---EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ-----MLMLRM 240 (298)
T ss_dssp TTCEECCTT---CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH
T ss_pred cchhhcCCC---cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH-----HHHHHH
Confidence 999876422 2234457899999999874 45688999999999999999999999965321 111111
Q ss_pred hhcccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 404 QTNSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 404 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
...... . ............+.+++..|++.||++|||+.|+++
T Consensus 241 ~~~~~~-------~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 241 IMSGNY-------Q-FGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHHTCC-------C-CCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HhcCCc-------c-cCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 110000 0 001111234567889999999999999999999986
No 226
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=7.1e-41 Score=325.31 Aligned_cols=261 Identities=20% Similarity=0.298 Sum_probs=202.9
Q ss_pred hhhccCCcceEcccCCcceEEEEc--CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCC------CccceeEEEec
Q 012213 180 ILECVKDNNVIGRGGAGVVYRGVT--PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHR------NIVRLKAFCSN 251 (468)
Q Consensus 180 ~~~~~~~~~~ig~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~------niv~l~~~~~~ 251 (468)
+.++|+..+.||+|+||+||+|.+ .+++.||||++... ....+.+.+|+.++..++|+ +++++++++..
T Consensus 12 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~ 88 (339)
T 1z57_A 12 LSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV---DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEH 88 (339)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEE
T ss_pred ccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC---CchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccccc
Confidence 356788999999999999999986 36889999998532 12235688899998888665 49999999999
Q ss_pred CCeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC-----------
Q 012213 252 KETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS----------- 320 (468)
Q Consensus 252 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~----------- 320 (468)
.+..++||||+ +++|.+++.......+++..+..++.||+.||+|||+.+ |+||||||+||+++.
T Consensus 89 ~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~ 164 (339)
T 1z57_A 89 HGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKI 164 (339)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC---
T ss_pred CCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCcc
Confidence 99999999999 899999998666567899999999999999999999887 999999999999987
Q ss_pred --------CCceEEeeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCC
Q 012213 321 --------DFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGE 392 (468)
Q Consensus 321 --------~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~ 392 (468)
++.+||+|||+++..... .....||+.|+|||++.+..++.++||||||+++|||++|+.||...+.
T Consensus 165 ~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 239 (339)
T 1z57_A 165 KRDERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS 239 (339)
T ss_dssp -CEEEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCH
T ss_pred ccccccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCh
Confidence 668999999999864321 2345789999999999998999999999999999999999999976332
Q ss_pred CCcCHHHHHHHhhcccccch---------------------------hhhcc--ccCCCCCHHHHHHHHHHHHhhcccCC
Q 012213 393 EGLDIVQWTKMQTNSSKEGV---------------------------VKILD--QRLSNTPLSEAMQVFFVAMLCVQEHG 443 (468)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~---------------------------~~~~d--~~~~~~~~~~~~~~~~l~~~c~~~~P 443 (468)
.. ........ ........ ..... .............+.+++.+|++.||
T Consensus 240 ~~-~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP 317 (339)
T 1z57_A 240 KE-HLAMMERI-LGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDP 317 (339)
T ss_dssp HH-HHHHHHHH-HCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSST
T ss_pred HH-HHHHHHHH-hCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCc
Confidence 11 00000000 00000000 00000 00012234567788999999999999
Q ss_pred CCCCCHHHHHH
Q 012213 444 VERPTMREVVQ 454 (468)
Q Consensus 444 ~~RPt~~ev~~ 454 (468)
++|||+.|+++
T Consensus 318 ~~Rpt~~ell~ 328 (339)
T 1z57_A 318 AKRITLREALK 328 (339)
T ss_dssp TTSCCHHHHTT
T ss_pred ccccCHHHHhc
Confidence 99999999985
No 227
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=8.2e-41 Score=327.30 Aligned_cols=261 Identities=22% Similarity=0.302 Sum_probs=196.9
Q ss_pred hhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCe----
Q 012213 180 ILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKET---- 254 (468)
Q Consensus 180 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~---- 254 (468)
+.+.|...+.||+|+||.||+|.+. +|+.||||++............+.+|+.+++.++||||+++++++.....
T Consensus 22 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 101 (353)
T 3coi_A 22 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 101 (353)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred cCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence 3567888999999999999999974 68999999986543333334678899999999999999999999987654
Q ss_pred --eEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccc
Q 012213 255 --NLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLA 332 (468)
Q Consensus 255 --~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla 332 (468)
.++||||++ ++|.+++.. .+++..+..++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~ 173 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLA 173 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTCT
T ss_pred eeEEEEecccc-CCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeecccc
Confidence 499999997 688888742 3899999999999999999999887 999999999999999999999999999
Q ss_pred ccccccCCCccccccccCccccCccccCC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccc
Q 012213 333 KYLQDTGASECMSAVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEG 411 (468)
Q Consensus 333 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (468)
+..... .....||+.|+|||++.+ ..++.++||||||+++|||++|+.||...+... .+............+.
T Consensus 174 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~ 247 (353)
T 3coi_A 174 RHADAE-----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTEF 247 (353)
T ss_dssp TC-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH-HHHHHHHHHCBCCHHH
T ss_pred cCCCCC-----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHH
Confidence 865421 234568999999998876 678999999999999999999999997633110 0000000000000000
Q ss_pred hh--------hhc-------cccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 412 VV--------KIL-------DQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 412 ~~--------~~~-------d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.. ..+ ...+..........+.+++.+|++.||++|||+.|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 248 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 00 000 01111222344567889999999999999999999986
No 228
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.9e-41 Score=335.00 Aligned_cols=202 Identities=22% Similarity=0.365 Sum_probs=154.6
Q ss_pred hhccCC-cceEcccCCcceEEEEcC---CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEe--cCCe
Q 012213 181 LECVKD-NNVIGRGGAGVVYRGVTP---NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCS--NKET 254 (468)
Q Consensus 181 ~~~~~~-~~~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~ 254 (468)
.+.|+. +++||+|+||+||+|.++ +++.||||++.... ....+.+|+.++++++||||+++++++. ....
T Consensus 19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 94 (405)
T 3rgf_A 19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG----ISMSACREIALLRELKHPNVISLQKVFLSHADRK 94 (405)
T ss_dssp HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS----CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTE
T ss_pred hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC----CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCe
Confidence 445555 568999999999999965 57889999985332 2256889999999999999999999995 4678
Q ss_pred eEEEEeccCCCChhhhcccC-------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEE----cCCCc
Q 012213 255 NLLVYEYMPNGSLGEVLHGK-------RGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL----NSDFE 323 (468)
Q Consensus 255 ~~lv~e~~~~gsL~~~l~~~-------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill----~~~~~ 323 (468)
.++||||++ |+|.+++... ....+++..+..++.||+.||+|||+.+ |+||||||+|||+ +.++.
T Consensus 95 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~ 170 (405)
T 3rgf_A 95 VWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGR 170 (405)
T ss_dssp EEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTC
T ss_pred EEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCc
Confidence 899999996 5888777521 1224899999999999999999999887 9999999999999 67889
Q ss_pred eEEeeccccccccccCC-CccccccccCccccCccccCCC-CCCcchhhHHHHHHHHHHHhCCCCCCCC
Q 012213 324 AHVADFGLAKYLQDTGA-SECMSAVAGSYGYIAPEYAYTL-KVDEKSDVYSFGVVLLELITGRRPVGDF 390 (468)
Q Consensus 324 ~kl~Dfgla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~ 390 (468)
+||+|||+++.+..... ........||+.|+|||++.+. .++.++|||||||++|||++|++||...
T Consensus 171 ~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 171 VKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp EEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred EEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 99999999987653211 1223456789999999998874 5899999999999999999999999763
No 229
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=9.7e-41 Score=334.03 Aligned_cols=266 Identities=26% Similarity=0.304 Sum_probs=194.7
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecC----C--
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNK----E-- 253 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----~-- 253 (468)
...|+..+.||+|+||.||+|.+. +|+.||||++.... ....+|+++++.++||||+++++++... +
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~ 126 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK------RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEV 126 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT------TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEE
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc------hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcce
Confidence 345788899999999999999985 58999999986432 1234799999999999999999988532 2
Q ss_pred eeEEEEeccCCCChhhhccc--CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC-CceEEeecc
Q 012213 254 TNLLVYEYMPNGSLGEVLHG--KRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD-FEAHVADFG 330 (468)
Q Consensus 254 ~~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg 330 (468)
..++||||+++ ++.+.+.. .....+++..+..++.||++||+|||+.+ |+||||||+|||++.+ +.+||+|||
T Consensus 127 ~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG 202 (420)
T 1j1b_A 127 YLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFG 202 (420)
T ss_dssp EEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCT
T ss_pred eEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccch
Confidence 25689999975 66665542 23456899999999999999999999777 9999999999999965 568999999
Q ss_pred ccccccccCCCccccccccCccccCccccCCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccc
Q 012213 331 LAKYLQDTGASECMSAVAGSYGYIAPEYAYTL-KVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSK 409 (468)
Q Consensus 331 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 409 (468)
+++.+.... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||.+... ...+............
T Consensus 203 ~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~-~~~l~~i~~~lg~p~~ 278 (420)
T 1j1b_A 203 SAKQLVRGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEIIKVLGTPTR 278 (420)
T ss_dssp TCEECCTTC---CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCSCCH
T ss_pred hhhhcccCC---CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCH
Confidence 998764322 22345789999999998764 799999999999999999999999976331 1112222221111111
Q ss_pred cchhhh-------ccccCCC------CCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH--HHHhcc
Q 012213 410 EGVVKI-------LDQRLSN------TPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ--MLAQAQ 460 (468)
Q Consensus 410 ~~~~~~-------~d~~~~~------~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~--~L~~~~ 460 (468)
+.+.+. .-+.... ........+.+++.+|++.||++|||+.|+++ .++++.
T Consensus 279 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 344 (420)
T 1j1b_A 279 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELR 344 (420)
T ss_dssp HHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred HHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCCHhhcccc
Confidence 111110 0000000 11123467889999999999999999999986 444443
No 230
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.5e-40 Score=326.68 Aligned_cols=265 Identities=20% Similarity=0.279 Sum_probs=199.0
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecC-----Ce
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNK-----ET 254 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 254 (468)
...|+..+.||+|+||.||+|.+. +++.||||++.... .......+.+|++++.+++||||+++++++... ..
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 104 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD 104 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTT-CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEecccc-CcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence 457889999999999999999874 67889999986422 222235688999999999999999999999655 36
Q ss_pred eEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q 012213 255 NLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKY 334 (468)
Q Consensus 255 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 334 (468)
.++||||++ |+|.+++... .+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 105 ~~iv~e~~~-~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~ 177 (364)
T 3qyz_A 105 VYIVQDLME-TDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARV 177 (364)
T ss_dssp EEEEEECCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEcccC-cCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcceEe
Confidence 799999997 6999988643 4899999999999999999999887 99999999999999999999999999987
Q ss_pred ccccCC-CccccccccCccccCccccC-CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccch
Q 012213 335 LQDTGA-SECMSAVAGSYGYIAPEYAY-TLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGV 412 (468)
Q Consensus 335 ~~~~~~-~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (468)
...... ........||+.|+|||++. ...++.++||||||+++|||++|+.||....... .+............+..
T Consensus 178 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~ 256 (364)
T 3qyz_A 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHILGILGSPSQEDL 256 (364)
T ss_dssp CCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHHHHHCSCCHHHH
T ss_pred cCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHHHhCCCCHHHH
Confidence 653222 11234567999999999765 4558999999999999999999999997643211 11111110000000000
Q ss_pred hh--------hccccC--CCCC-----HHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 413 VK--------ILDQRL--SNTP-----LSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 413 ~~--------~~d~~~--~~~~-----~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.. ...... ...+ ......+.+++.+|++.||++|||+.|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 257 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00 000000 0011 122356789999999999999999999987
No 231
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=5.6e-41 Score=326.06 Aligned_cols=251 Identities=22% Similarity=0.267 Sum_probs=173.3
Q ss_pred hhhccCC-cceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHH-HHHhCCCCCCccceeEEEec----C
Q 012213 180 ILECVKD-NNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEI-RTLGKIRHRNIVRLKAFCSN----K 252 (468)
Q Consensus 180 ~~~~~~~-~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~-~~l~~l~h~niv~l~~~~~~----~ 252 (468)
+.++|.. .++||+|+||+||+|.+. +|+.||||++... .....|+ ..+..++||||+++++++.. .
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~ 98 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-------PKARQEVDHHWQASGGPHIVCILDVYENMHHGK 98 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-------HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCC
Confidence 3566777 457999999999999985 6899999998532 2233333 34566799999999999875 4
Q ss_pred CeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC---CCceEEeec
Q 012213 253 ETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS---DFEAHVADF 329 (468)
Q Consensus 253 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Df 329 (468)
...++||||+++|+|.+++.......+++.++..++.|++.||.|||+.+ |+||||||+||+++. ++.+||+||
T Consensus 99 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Df 175 (336)
T 3fhr_A 99 RCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDF 175 (336)
T ss_dssp EEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCC
T ss_pred ceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEecc
Confidence 45789999999999999998666567999999999999999999999887 999999999999986 455999999
Q ss_pred cccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccc
Q 012213 330 GLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSK 409 (468)
Q Consensus 330 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 409 (468)
|+++..... ......||+.|+|||++.+..++.++||||||+++|||++|+.||........... ...
T Consensus 176 g~~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~-~~~------- 243 (336)
T 3fhr_A 176 GFAKETTQN----ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPG-MKR------- 243 (336)
T ss_dssp TTCEEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------
T ss_pred ccceecccc----ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhh-HHH-------
Confidence 999865421 22345689999999999888899999999999999999999999976332111000 000
Q ss_pred cchhhhccccC-CCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 410 EGVVKILDQRL-SNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 410 ~~~~~~~d~~~-~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.+.. ..... ..........+.+++..|++.||++|||+.|+++
T Consensus 244 -~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 244 -RIRL-GQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp ---------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred -hhhc-cccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0000 00000 1111234566788999999999999999999998
No 232
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=6.4e-41 Score=324.51 Aligned_cols=251 Identities=26% Similarity=0.365 Sum_probs=177.9
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHH-HHhCCCCCCccceeEEEecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIR-TLGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
.+.|+..+.||+|+||.||+|.+. +|+.||||++..... .....++..|+. +++.++||||+++++++...+..++|
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv 99 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD-EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC 99 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC-HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC-chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEE
Confidence 467888899999999999999984 688999999864322 122234555665 77888999999999999999999999
Q ss_pred EeccCCCChhhhccc---CCCCCCCHHHHHHHHHHHHHHHHHhhhc-CCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q 012213 259 YEYMPNGSLGEVLHG---KRGSFLKWEMRLKIAIEAAKGLSYLHHD-CSPLIIHRDVKSNNILLNSDFEAHVADFGLAKY 334 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~---~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 334 (468)
|||++ |+|.+++.. .....+++..+..++.+++.||.|||+. + |+||||||+||+++.++.+||+|||+++.
T Consensus 100 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~ 175 (327)
T 3aln_A 100 MELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQ 175 (327)
T ss_dssp ECCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC
T ss_pred EeecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCcee
Confidence 99997 488777652 2345689999999999999999999987 7 99999999999999999999999999987
Q ss_pred ccccCCCccccccccCccccCcccc----CCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhccccc
Q 012213 335 LQDTGASECMSAVAGSYGYIAPEYA----YTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKE 410 (468)
Q Consensus 335 ~~~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 410 (468)
..... ......||+.|+|||++ .+..++.++||||||+++|||++|+.||........
T Consensus 176 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--------------- 237 (327)
T 3aln_A 176 LVDSI---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD--------------- 237 (327)
T ss_dssp ---------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--------------------
T ss_pred ccccc---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH---------------
Confidence 64321 12334689999999998 456789999999999999999999999976321100
Q ss_pred chhhhcccc---C-CCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 411 GVVKILDQR---L-SNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 411 ~~~~~~d~~---~-~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
......... + ..........+.+++..|++.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 238 QLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp --CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 111111111 1 1111234567888999999999999999999976
No 233
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.2e-40 Score=326.86 Aligned_cols=269 Identities=22% Similarity=0.293 Sum_probs=188.8
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCe-----
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKET----- 254 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----- 254 (468)
.++|+..+.||+|+||+||+|.+. +|+.||||++..... ....+.+++..+..++||||+++++++.....
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 98 (360)
T 3e3p_A 22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR---FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRD 98 (360)
T ss_dssp HTTEEEC----------CEEEEETTTCCEEEEEEEECCTT---CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTC
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc---ccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccc
Confidence 677889999999999999999984 689999998854322 22456778888888999999999999865443
Q ss_pred --eEEEEeccCCCChhhhccc--CCCCCCCHHHHHHHHHHHHHHHHHhh--hcCCCCeeecCCCCCcEEEcC-CCceEEe
Q 012213 255 --NLLVYEYMPNGSLGEVLHG--KRGSFLKWEMRLKIAIEAAKGLSYLH--HDCSPLIIHRDVKSNNILLNS-DFEAHVA 327 (468)
Q Consensus 255 --~~lv~e~~~~gsL~~~l~~--~~~~~l~~~~~~~i~~~ia~~l~~LH--~~~~~~ivH~dlk~~Nill~~-~~~~kl~ 327 (468)
.++||||+++ +|.+.+.. .....+++..+..++.|++.||.||| +.+ |+||||||+|||++. ++.+||+
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~~~kl~ 174 (360)
T 3e3p_A 99 IYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADGTLKLC 174 (360)
T ss_dssp EEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTTEEEEC
T ss_pred eeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCCcEEEe
Confidence 7899999976 55444332 23446889999999999999999999 777 999999999999997 8999999
Q ss_pred eccccccccccCCCccccccccCccccCccccCCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhc
Q 012213 328 DFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTL-KVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTN 406 (468)
Q Consensus 328 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 406 (468)
|||+++.+.... ......||+.|+|||++.+. .++.++||||||+++|||+||+.||...... ..+.........
T Consensus 175 Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~ 250 (360)
T 3e3p_A 175 DFGSAKKLSPSE---PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA-GQLHEIVRVLGC 250 (360)
T ss_dssp CCTTCBCCCTTS---CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCC
T ss_pred eCCCceecCCCC---CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH-HHHHHHHHHcCC
Confidence 999998765322 22345689999999988654 4899999999999999999999999763311 111111111111
Q ss_pred ccccchhhh---------cc-------ccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH--HHHhcc
Q 012213 407 SSKEGVVKI---------LD-------QRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ--MLAQAQ 460 (468)
Q Consensus 407 ~~~~~~~~~---------~d-------~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~--~L~~~~ 460 (468)
...+....+ .+ ..+..........+.+++..|++.||++|||+.|+++ .+++..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 322 (360)
T 3e3p_A 251 PSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH 322 (360)
T ss_dssp CCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred CCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence 100000000 00 0011122234677889999999999999999999987 455543
No 234
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=320.62 Aligned_cols=278 Identities=21% Similarity=0.298 Sum_probs=195.5
Q ss_pred hhhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEe-------
Q 012213 179 DILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCS------- 250 (468)
Q Consensus 179 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~------- 250 (468)
++..+|+..+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|++++++++||||+++++++.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 85 (320)
T 2i6l_A 8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD--PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLT 85 (320)
T ss_dssp EETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS--HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCC
T ss_pred ccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC--hHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccc
Confidence 44577888999999999999999986 48899999886432 233467889999999999999999999874
Q ss_pred -------cCCeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc-CCC
Q 012213 251 -------NKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLN-SDF 322 (468)
Q Consensus 251 -------~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~ 322 (468)
+....++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++ +++
T Consensus 86 ~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~ 158 (320)
T 2i6l_A 86 DDVGSLTELNSVYIVQEYME-TDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDL 158 (320)
T ss_dssp C----CCSCSEEEEEEECCS-EEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTT
T ss_pred cccccccccCceeEEeeccC-CCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCC
Confidence 3467799999997 699999863 34889999999999999999999887 99999999999997 567
Q ss_pred ceEEeeccccccccccCC-CccccccccCccccCccccCC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHH
Q 012213 323 EAHVADFGLAKYLQDTGA-SECMSAVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQW 400 (468)
Q Consensus 323 ~~kl~Dfgla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~ 400 (468)
.+||+|||+++....... ........+|..|+|||.+.+ ..++.++||||||+++|||+||+.||....... .....
T Consensus 159 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~ 237 (320)
T 2i6l_A 159 VLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE-QMQLI 237 (320)
T ss_dssp EEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHH
T ss_pred eEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH-HHHHH
Confidence 999999999987643211 112234567899999998765 678999999999999999999999997633110 00000
Q ss_pred HHHhhcccccchhh-------hccccC--CCCC-----HHHHHHHHHHHHhhcccCCCCCCCHHHHHH--HHHhccCCCC
Q 012213 401 TKMQTNSSKEGVVK-------ILDQRL--SNTP-----LSEAMQVFFVAMLCVQEHGVERPTMREVVQ--MLAQAQKPNT 464 (468)
Q Consensus 401 ~~~~~~~~~~~~~~-------~~d~~~--~~~~-----~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~--~L~~~~~~~~ 464 (468)
.........+...+ .+.... ...+ ......+.+++..|++.||++|||+.|+++ .+.....+..
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~p~~ 317 (320)
T 2i6l_A 238 LESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYSFPMD 317 (320)
T ss_dssp HHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTCC---
T ss_pred HHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhCCcccccccCccC
Confidence 00000000000000 000000 0001 123456889999999999999999999987 5666655554
Q ss_pred cc
Q 012213 465 FQ 466 (468)
Q Consensus 465 ~~ 466 (468)
.|
T Consensus 318 ~~ 319 (320)
T 2i6l_A 318 EP 319 (320)
T ss_dssp --
T ss_pred CC
Confidence 33
No 235
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.4e-40 Score=317.99 Aligned_cols=252 Identities=24% Similarity=0.355 Sum_probs=191.1
Q ss_pred hhhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEec-------
Q 012213 180 ILECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSN------- 251 (468)
Q Consensus 180 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------- 251 (468)
+.++|+..+.||+|+||.||+|.+ .+++.||||++... ......+.+|+.++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT---EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKP 80 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc---HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhh
Confidence 457788899999999999999997 47899999998532 2233568899999999999999999998865
Q ss_pred ------CCeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceE
Q 012213 252 ------KETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAH 325 (468)
Q Consensus 252 ------~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 325 (468)
....++||||+++|+|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+|
T Consensus 81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~k 156 (303)
T 1zy4_A 81 MTAVKKKSTLFIQMEYCENGTLYDLIHSE-NLNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVK 156 (303)
T ss_dssp -----CEEEEEEEEECCCSCBHHHHHHHS-CGGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEE
T ss_pred hcccccCCceEEEEecCCCCCHHHhhhcc-ccccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEE
Confidence 34678999999999999999743 345788999999999999999999887 99999999999999999999
Q ss_pred EeeccccccccccC------------CCccccccccCccccCccccCCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCC
Q 012213 326 VADFGLAKYLQDTG------------ASECMSAVAGSYGYIAPEYAYTL-KVDEKSDVYSFGVVLLELITGRRPVGDFGE 392 (468)
Q Consensus 326 l~Dfgla~~~~~~~------------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~~~ 392 (468)
|+|||++....... .........||+.|+|||.+.+. .++.++||||||+++|||++ ||....
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~- 232 (303)
T 1zy4_A 157 IGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM- 232 (303)
T ss_dssp ECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH-
T ss_pred EeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch-
Confidence 99999998664221 01222345689999999998764 68999999999999999998 553210
Q ss_pred CCcCHHHHHHHhhcccccchhhhccccC-CCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 393 EGLDIVQWTKMQTNSSKEGVVKILDQRL-SNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
............ .... ...+......+.+++..|++.||++|||+.|+++
T Consensus 233 ---~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 233 ---ERVNILKKLRSV---------SIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp ---HHHHHHHHHHST---------TCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred ---hHHHHHHhcccc---------ccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 111111110000 0011 1223344566788999999999999999999986
No 236
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=7.5e-40 Score=323.90 Aligned_cols=203 Identities=26% Similarity=0.324 Sum_probs=170.7
Q ss_pred chhhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCC-CC-----CccceeEEEe
Q 012213 178 DDILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIR-HR-----NIVRLKAFCS 250 (468)
Q Consensus 178 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~-----niv~l~~~~~ 250 (468)
+.+.++|+..+.||+|+||+||+|.+. +++.||||++... ......+..|+.++..++ |+ +++++++++.
T Consensus 50 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~ 126 (382)
T 2vx3_A 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK---KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM 126 (382)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS---HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEE
T ss_pred CEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc---HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeec
Confidence 344678999999999999999999875 6788999998632 122355677888887774 44 4999999999
Q ss_pred cCCeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc--CCCceEEee
Q 012213 251 NKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLN--SDFEAHVAD 328 (468)
Q Consensus 251 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~--~~~~~kl~D 328 (468)
..+..++||||++ |+|.+++.......+++..+..++.|++.||.|||.. ..+|+||||||+|||++ .++.+||+|
T Consensus 127 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~D 204 (382)
T 2vx3_A 127 FRNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVD 204 (382)
T ss_dssp ETTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECC
T ss_pred cCCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEe
Confidence 9999999999996 6999999866656699999999999999999999942 12399999999999995 478899999
Q ss_pred ccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Q 012213 329 FGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDF 390 (468)
Q Consensus 329 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~ 390 (468)
||+++..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 205 FG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 205 FGSSCQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp CTTCEETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccCceecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999876421 23467899999999999999999999999999999999999999763
No 237
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.6e-40 Score=323.62 Aligned_cols=272 Identities=22% Similarity=0.281 Sum_probs=200.0
Q ss_pred hhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecC-----C
Q 012213 180 ILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNK-----E 253 (468)
Q Consensus 180 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~ 253 (468)
+.++|+..+.||+|+||.||+|.+. +|+.||||++.... .......+.+|+.+++.++||||+++++++... .
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 87 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD-KPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN 87 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCS-SHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccc-cchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence 4567888999999999999999975 68899999985332 222235678999999999999999999988654 6
Q ss_pred eeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q 012213 254 TNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAK 333 (468)
Q Consensus 254 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~ 333 (468)
..++||||++ |+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.
T Consensus 88 ~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLAR 160 (353)
T ss_dssp CEEEEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCE
T ss_pred eEEEEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEeccccc
Confidence 7899999996 699998864 34899999999999999999999887 9999999999999999999999999998
Q ss_pred cccccCCCc--------cccccccCccccCccccCC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHh
Q 012213 334 YLQDTGASE--------CMSAVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQ 404 (468)
Q Consensus 334 ~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 404 (468)
......... ......||+.|+|||++.+ ..++.++||||||+++|||++|+.||.+.+... .+.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~ 239 (353)
T 2b9h_A 161 IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH-QLLLIFGII 239 (353)
T ss_dssp ECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHH
T ss_pred ccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHh
Confidence 765322111 1233578999999998654 678999999999999999999999997633110 000000000
Q ss_pred hccccc---------chhhhcccc--CCCC-----CHHHHHHHHHHHHhhcccCCCCCCCHHHHHH--HHHhcc
Q 012213 405 TNSSKE---------GVVKILDQR--LSNT-----PLSEAMQVFFVAMLCVQEHGVERPTMREVVQ--MLAQAQ 460 (468)
Q Consensus 405 ~~~~~~---------~~~~~~d~~--~~~~-----~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~--~L~~~~ 460 (468)
.....+ ...+.+... .... .......+.+++.+|++.||++|||+.|+++ .++...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 313 (353)
T 2b9h_A 240 GTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH 313 (353)
T ss_dssp CCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred CCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccC
Confidence 000000 000000000 0000 0123456788999999999999999999987 455443
No 238
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=6.3e-41 Score=323.54 Aligned_cols=243 Identities=21% Similarity=0.354 Sum_probs=197.3
Q ss_pred hhhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCC----CchhHHHHHHHHHhCCC--CCCccceeEEEecC
Q 012213 180 ILECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGS----SHDNGLSAEIRTLGKIR--HRNIVRLKAFCSNK 252 (468)
Q Consensus 180 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~ 252 (468)
+.+.|+..+.||+|+||.||+|.+ .+++.||||++....... .....+..|+.++++++ |+|++++++++...
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 356788899999999999999986 568899999987543322 11245678999999986 59999999999999
Q ss_pred CeeEEEEeccCC-CChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc-CCCceEEeecc
Q 012213 253 ETNLLVYEYMPN-GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLN-SDFEAHVADFG 330 (468)
Q Consensus 253 ~~~~lv~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfg 330 (468)
+..++|+||+.+ ++|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++ +++.+||+|||
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~kL~Dfg 195 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG 195 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCT
T ss_pred CcEEEEEEcCCCCccHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCEEEeeCc
Confidence 999999999976 8999998643 35899999999999999999999887 99999999999999 78999999999
Q ss_pred ccccccccCCCccccccccCccccCccccCCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccc
Q 012213 331 LAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKV-DEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSK 409 (468)
Q Consensus 331 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 409 (468)
+++..... ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||.... ..
T Consensus 196 ~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------~~--------- 255 (320)
T 3a99_A 196 SGALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EI--------- 255 (320)
T ss_dssp TCEECCSS----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HH---------
T ss_pred cccccccc----cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-------hh---------
Confidence 99876522 2234568999999999877665 688999999999999999999996411 00
Q ss_pred cchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 410 EGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 410 ~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
..... ..+......+.+++.+|++.||++|||+.|+++
T Consensus 256 ------~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 256 ------IRGQV-FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp ------HHCCC-CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ------hcccc-cccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00000 011123456778999999999999999999987
No 239
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.7e-40 Score=319.96 Aligned_cols=253 Identities=22% Similarity=0.294 Sum_probs=179.4
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 259 (468)
.++|+..+.||+|+||.||+|.+. +|+.||||++............+.++..+++.++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 567888899999999999999985 6899999998654322222233445556788889999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhc-CCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHD-CSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 260 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
||+ ++.+..+.. .....+++..+..++.+++.||.|||+. + |+||||||+||+++.++.+||+|||++......
T Consensus 104 e~~-~~~~~~l~~-~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (318)
T 2dyl_A 104 ELM-GTCAEKLKK-RMQGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRLVDD 178 (318)
T ss_dssp CCC-SEEHHHHHH-HHTSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred ecc-CCcHHHHHH-HhccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence 999 455555443 3334689999999999999999999985 7 999999999999999999999999999766432
Q ss_pred CCCccccccccCccccCccccC-----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchh
Q 012213 339 GASECMSAVAGSYGYIAPEYAY-----TLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVV 413 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (468)
. ......||+.|+|||++. ...++.++||||||+++|||++|+.||...... ...+... .....
T Consensus 179 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~~~-~~~~~---- 247 (318)
T 2dyl_A 179 K---AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD---FEVLTKV-LQEEP---- 247 (318)
T ss_dssp -----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSH---HHHHHHH-HHSCC----
T ss_pred c---cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCcc---HHHHHHH-hccCC----
Confidence 1 223456899999999984 456889999999999999999999999753211 1111111 11100
Q ss_pred hhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 414 KILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 414 ~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.. ..........+.+++..|++.||.+||++.|+++
T Consensus 248 ----~~-~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 248 ----PL-LPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp ----CC-CCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ----CC-CCccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 00 0111123456788999999999999999999986
No 240
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=2.3e-40 Score=332.78 Aligned_cols=250 Identities=24% Similarity=0.333 Sum_probs=186.5
Q ss_pred hccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCC-CCCCccceeEEEecCCeeEEEEe
Q 012213 182 ECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYE 260 (468)
Q Consensus 182 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 260 (468)
+.+...+.||+|+||+||.+...+|+.||||++... ..+.+.+|+.++.++ +||||+++++++.+.+..++|||
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~-----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E 89 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID-----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALE 89 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG-----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH-----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEe
Confidence 345557889999999998777778999999998532 225578899999876 89999999999999999999999
Q ss_pred ccCCCChhhhcccCCCCC-----CCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC-------------C
Q 012213 261 YMPNGSLGEVLHGKRGSF-----LKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD-------------F 322 (468)
Q Consensus 261 ~~~~gsL~~~l~~~~~~~-----l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~-------------~ 322 (468)
|++ |+|.+++....... .++..++.++.||+.||+|||+.+ |+||||||+|||++.+ +
T Consensus 90 ~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~ 165 (434)
T 2rio_A 90 LCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENL 165 (434)
T ss_dssp CCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSC
T ss_pred cCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCce
Confidence 995 69999997543211 123345789999999999999887 9999999999999754 4
Q ss_pred ceEEeeccccccccccCCC--ccccccccCccccCccccCC-------CCCCcchhhHHHHHHHHHHHh-CCCCCCCCCC
Q 012213 323 EAHVADFGLAKYLQDTGAS--ECMSAVAGSYGYIAPEYAYT-------LKVDEKSDVYSFGVVLLELIT-GRRPVGDFGE 392 (468)
Q Consensus 323 ~~kl~Dfgla~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-------~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~ 392 (468)
.+||+|||+++.+...... .......||+.|+|||++.+ ..++.++|||||||++|||+| |+.||.....
T Consensus 166 ~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~ 245 (434)
T 2rio_A 166 RILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYS 245 (434)
T ss_dssp EEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTT
T ss_pred EEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchh
Confidence 8999999999877532221 12234579999999999865 678999999999999999999 9999965321
Q ss_pred CCcCHHHHHHHhhcccccchhhhccc-cC-CCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 393 EGLDIVQWTKMQTNSSKEGVVKILDQ-RL-SNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~d~-~~-~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
.. ..... ...+. .. ..........+.+++.+|++.||++|||+.||++
T Consensus 246 ~~---~~i~~-----------~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 246 RE---SNIIR-----------GIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp HH---HHHHH-----------TCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hH---HHHhc-----------CCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 10 11100 00000 01 1123456678899999999999999999999985
No 241
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=319.94 Aligned_cols=244 Identities=23% Similarity=0.338 Sum_probs=189.9
Q ss_pred hhhhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCC----CchhHHHHHHHHHhCC----CCCCccceeEEE
Q 012213 179 DILECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGS----SHDNGLSAEIRTLGKI----RHRNIVRLKAFC 249 (468)
Q Consensus 179 ~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l----~h~niv~l~~~~ 249 (468)
.+.++|+..+.||+|+||.||+|.+ .+++.||||++....... .....+..|+.++.++ +||||+++++++
T Consensus 28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 3466788999999999999999987 468899999986443211 1123456788888888 899999999999
Q ss_pred ecCCeeEEEEec-cCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc-CCCceEEe
Q 012213 250 SNKETNLLVYEY-MPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLN-SDFEAHVA 327 (468)
Q Consensus 250 ~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~ 327 (468)
...+..++|+|| +++++|.+++... ..+++..+..++.||+.||+|||+.+ |+||||||+||+++ .++.+||+
T Consensus 108 ~~~~~~~~v~e~~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl~ 182 (312)
T 2iwi_A 108 ETQEGFMLVLERPLPAQDLFDYITEK--GPLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKLI 182 (312)
T ss_dssp -----CEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTTEEEEC
T ss_pred ecCCeEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCCeEEEE
Confidence 999999999999 7899999999753 35899999999999999999999888 99999999999999 88999999
Q ss_pred eccccccccccCCCccccccccCccccCccccCCCCCC-cchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhc
Q 012213 328 DFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVD-EKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTN 406 (468)
Q Consensus 328 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 406 (468)
|||++...... ......|+..|+|||++.+..+. .++||||||+++|||++|+.||.... .
T Consensus 183 dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~------- 244 (312)
T 2iwi_A 183 DFGSGALLHDE----PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-------E------- 244 (312)
T ss_dssp CCSSCEECCSS----CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------H-------
T ss_pred EcchhhhcccC----cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-------H-------
Confidence 99999876532 22445689999999998776665 58999999999999999999996411 0
Q ss_pred ccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 407 SSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 407 ~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
..+.. ...+......+.+++.+|++.||++|||+.|+++
T Consensus 245 --------~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 245 --------ILEAE-LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp --------HHHTC-CCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred --------Hhhhc-cCCcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00000 0112233456788999999999999999999987
No 242
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=2.7e-40 Score=325.88 Aligned_cols=266 Identities=19% Similarity=0.224 Sum_probs=201.4
Q ss_pred hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCC-----------CCCccceeEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIR-----------HRNIVRLKAF 248 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~l~~~ 248 (468)
.+.|+..+.||+|+||+||+|.+ .+++.||||++... ......+.+|+.++.+++ ||||++++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~ 94 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD---KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 94 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC---ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHH
Confidence 45788889999999999999997 56889999998532 122356788999988876 8999999999
Q ss_pred EecCC----eeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhc-CCCCeeecCCCCCcEEEc----
Q 012213 249 CSNKE----TNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHD-CSPLIIHRDVKSNNILLN---- 319 (468)
Q Consensus 249 ~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~dlk~~Nill~---- 319 (468)
+...+ ..++||||+ +++|.+++.......+++..+..++.||+.||+|||+. + |+||||||+|||++
T Consensus 95 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~~ 170 (373)
T 1q8y_A 95 FNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDS 170 (373)
T ss_dssp EEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEET
T ss_pred hhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccCC
Confidence 87654 678999999 89999999866666699999999999999999999987 7 99999999999994
Q ss_pred --CCCceEEeeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCc--
Q 012213 320 --SDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGL-- 395 (468)
Q Consensus 320 --~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~-- 395 (468)
..+.+||+|||++...... .....||+.|+|||++.+..++.++||||||+++|||+||+.||........
T Consensus 171 ~~~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~ 245 (373)
T 1q8y_A 171 PENLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTK 245 (373)
T ss_dssp TTTEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------C
T ss_pred CcCcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCC
Confidence 4458999999999876422 2345689999999999999999999999999999999999999976332110
Q ss_pred ---CHHHHHHHhhccccc-------chhhhcc--------------------ccCCCCCHHHHHHHHHHHHhhcccCCCC
Q 012213 396 ---DIVQWTKMQTNSSKE-------GVVKILD--------------------QRLSNTPLSEAMQVFFVAMLCVQEHGVE 445 (468)
Q Consensus 396 ---~~~~~~~~~~~~~~~-------~~~~~~d--------------------~~~~~~~~~~~~~~~~l~~~c~~~~P~~ 445 (468)
.+....... ...+. .....++ ......+......+.+++..|++.||++
T Consensus 246 ~~~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 324 (373)
T 1q8y_A 246 DDDHIAQIIELL-GELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRK 324 (373)
T ss_dssp HHHHHHHHHHHH-CSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTT
T ss_pred hHHHHHHHHHhc-CCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccc
Confidence 011100000 00000 0000000 0112345677888999999999999999
Q ss_pred CCCHHHHHH--HHHhc
Q 012213 446 RPTMREVVQ--MLAQA 459 (468)
Q Consensus 446 RPt~~ev~~--~L~~~ 459 (468)
|||+.|+++ .+.+.
T Consensus 325 Rpt~~ell~hp~f~~~ 340 (373)
T 1q8y_A 325 RADAGGLVNHPWLKDT 340 (373)
T ss_dssp CBCHHHHHTCGGGTTC
T ss_pred cCCHHHHhhChhhhcc
Confidence 999999987 44443
No 243
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=4.9e-40 Score=321.61 Aligned_cols=261 Identities=20% Similarity=0.259 Sum_probs=199.9
Q ss_pred hhhccCCcceEcccCCcceEEEEcC-CC-cEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCC------ccceeEEEec
Q 012213 180 ILECVKDNNVIGRGGAGVVYRGVTP-NG-EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRN------IVRLKAFCSN 251 (468)
Q Consensus 180 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n------iv~l~~~~~~ 251 (468)
+.++|+..+.||+|+||+||+|.+. ++ +.||||++... ......+..|+.+++.++|++ ++.+.+++..
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 93 (355)
T 2eu9_A 17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV---GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF 93 (355)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE
T ss_pred ecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc---ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee
Confidence 3567889999999999999999974 34 68999998532 223356788999998887665 8999999999
Q ss_pred CCeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEE-------------
Q 012213 252 KETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL------------- 318 (468)
Q Consensus 252 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill------------- 318 (468)
.+..++||||+ ++++.+++.......+++..+..++.||+.||+|||+.+ |+||||||+|||+
T Consensus 94 ~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~ 169 (355)
T 2eu9_A 94 HGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHK 169 (355)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-
T ss_pred CCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecccccccccccc
Confidence 99999999999 678878776655567999999999999999999999777 9999999999999
Q ss_pred ------cCCCceEEeeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCC
Q 012213 319 ------NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGE 392 (468)
Q Consensus 319 ------~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~ 392 (468)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus 170 ~~~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 244 (355)
T 2eu9_A 170 SCEEKSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN 244 (355)
T ss_dssp CCCEEEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred cccccccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCH
Confidence 56789999999999864321 2345789999999999999999999999999999999999999976331
Q ss_pred CCcCHHHHHHHhhcccccch-------hhhcc----------------------ccCCCCCHHHHHHHHHHHHhhcccCC
Q 012213 393 EGLDIVQWTKMQTNSSKEGV-------VKILD----------------------QRLSNTPLSEAMQVFFVAMLCVQEHG 443 (468)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~-------~~~~d----------------------~~~~~~~~~~~~~~~~l~~~c~~~~P 443 (468)
. ................. ..... .........+...+.+++.+|++.||
T Consensus 245 ~--~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP 322 (355)
T 2eu9_A 245 R--EHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDP 322 (355)
T ss_dssp H--HHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSST
T ss_pred H--HHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCCh
Confidence 1 00110000000000000 00000 00011233456688899999999999
Q ss_pred CCCCCHHHHHH
Q 012213 444 VERPTMREVVQ 454 (468)
Q Consensus 444 ~~RPt~~ev~~ 454 (468)
++|||+.|+++
T Consensus 323 ~~Rpt~~e~l~ 333 (355)
T 2eu9_A 323 AQRITLAEALL 333 (355)
T ss_dssp TTSCCHHHHTT
T ss_pred hhCcCHHHHhc
Confidence 99999999985
No 244
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.8e-40 Score=329.61 Aligned_cols=249 Identities=23% Similarity=0.291 Sum_probs=186.1
Q ss_pred hccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCC-CCCCccceeEEEecCCeeEEEEe
Q 012213 182 ECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLVYE 260 (468)
Q Consensus 182 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 260 (468)
..|...+.||+|+||+||.....+++.||||++.... ...+.+|+.+++++ +||||+++++++.+....++|||
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~-----~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 98 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC-----FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE 98 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT-----EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH-----HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence 4577789999999999766556689999999985322 13467899999998 79999999999999999999999
Q ss_pred ccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC-----CCceEEeeccccccc
Q 012213 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS-----DFEAHVADFGLAKYL 335 (468)
Q Consensus 261 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~-----~~~~kl~Dfgla~~~ 335 (468)
|++ |+|.+++..... ...+..+..++.||+.||+|||+.+ |+||||||+|||++. ...+||+|||+++.+
T Consensus 99 ~~~-g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~ 173 (432)
T 3p23_A 99 LCA-ATLQEYVEQKDF-AHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL 173 (432)
T ss_dssp CCS-EEHHHHHHSSSC-CCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC
T ss_pred CCC-CCHHHHHHhcCC-CccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccceeec
Confidence 996 699999975442 3444566789999999999999887 999999999999953 346889999999876
Q ss_pred cccCC-CccccccccCccccCccccC---CCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhccccc
Q 012213 336 QDTGA-SECMSAVAGSYGYIAPEYAY---TLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKE 410 (468)
Q Consensus 336 ~~~~~-~~~~~~~~gt~~y~aPE~~~---~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 410 (468)
..... ........||+.|+|||++. ...++.++|||||||++|||+| |..||...... ........
T Consensus 174 ~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~------~~~~~~~~--- 244 (432)
T 3p23_A 174 AVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR------QANILLGA--- 244 (432)
T ss_dssp ------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH------HHHHHTTC---
T ss_pred cCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH------HHHHHhcc---
Confidence 53221 12334567999999999987 4567889999999999999999 99999642211 00000000
Q ss_pred chhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 411 GVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 411 ~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
...............+.+++.+|++.||++|||+.||++
T Consensus 245 -----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 245 -----CSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp -----CCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -----CCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 001111122345566789999999999999999999984
No 245
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=2.8e-39 Score=334.63 Aligned_cols=270 Identities=28% Similarity=0.316 Sum_probs=201.7
Q ss_pred hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEec------CC
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSN------KE 253 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~ 253 (468)
...|+..+.||+|+||+||+|.+ .+|+.||||++.... .....+.+.+|++++++++||||+++++++.. .+
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQEL-SPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCC-CHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccC-CHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 56789999999999999999998 468899999876432 22334568899999999999999999998765 66
Q ss_pred eeEEEEeccCCCChhhhcccCC-CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCc---eEEeec
Q 012213 254 TNLLVYEYMPNGSLGEVLHGKR-GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFE---AHVADF 329 (468)
Q Consensus 254 ~~~lv~e~~~~gsL~~~l~~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Df 329 (468)
..++||||+++|+|.+++.... ...+++..+..++.+++.||+|||+.+ |+||||||+||+++.++. +||+||
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEccc
Confidence 7799999999999999997533 235889999999999999999999887 999999999999997765 999999
Q ss_pred cccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccc
Q 012213 330 GLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSK 409 (468)
Q Consensus 330 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 409 (468)
|++...... .......||+.|+|||.+.+..++.++||||||+++|||++|+.||.... ....|.........
T Consensus 169 G~a~~~~~~---~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~----~~~~~~~~i~~~~~ 241 (676)
T 3qa8_A 169 GYAKELDQG---ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW----QPVQWHGKVREKSN 241 (676)
T ss_dssp CCCCBTTSC---CCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC----HHHHSSTTCC----
T ss_pred ccccccccc---cccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCccc----chhhhhhhhhcccc
Confidence 999876532 22345678999999999999999999999999999999999999996521 11222111110000
Q ss_pred cc--hhhhcc------cc---CCCCCHHHHHHHHHHHHhhcccCCCCCCCHHH-----HHHHHHhccC
Q 012213 410 EG--VVKILD------QR---LSNTPLSEAMQVFFVAMLCVQEHGVERPTMRE-----VVQMLAQAQK 461 (468)
Q Consensus 410 ~~--~~~~~d------~~---~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~e-----v~~~L~~~~~ 461 (468)
.. ..+... .. ...........+.+++..|++.||++|||+.| +.+.++++..
T Consensus 242 ~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~ 309 (676)
T 3qa8_A 242 EHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILS 309 (676)
T ss_dssp --CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHC
T ss_pred hhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHh
Confidence 00 000000 01 11233456778899999999999999999987 5556655543
No 246
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=3.3e-38 Score=301.52 Aligned_cols=235 Identities=23% Similarity=0.303 Sum_probs=183.7
Q ss_pred chhhhccCCc-ceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHH-hCCCCCCccceeEEEec---
Q 012213 178 DDILECVKDN-NVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTL-GKIRHRNIVRLKAFCSN--- 251 (468)
Q Consensus 178 ~~~~~~~~~~-~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~--- 251 (468)
.++.+.|... +.||+|+||.||+|.+ .+++.||+|++.. ...+.+|+.++ +..+||||+++++++..
T Consensus 13 ~~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~ 85 (299)
T 3m2w_A 13 NAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYENLYA 85 (299)
T ss_dssp SCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred cccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcC
Confidence 3446667665 7899999999999987 5688999999853 14577888887 66699999999999876
Q ss_pred -CCeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC---CCceEEe
Q 012213 252 -KETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS---DFEAHVA 327 (468)
Q Consensus 252 -~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~ 327 (468)
....++||||+++|+|.+++.......+++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.+||+
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~ 162 (299)
T 3m2w_A 86 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLT 162 (299)
T ss_dssp TEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEEC
T ss_pred CCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEe
Confidence 667899999999999999998766667999999999999999999999887 999999999999998 7889999
Q ss_pred eccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcc
Q 012213 328 DFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNS 407 (468)
Q Consensus 328 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 407 (468)
|||++.... +..++.++||||||+++|||+||+.||........ ..
T Consensus 163 Dfg~a~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~----------~~ 208 (299)
T 3m2w_A 163 DFGFAKETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI----------SP 208 (299)
T ss_dssp CCTTCEECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-----------------C
T ss_pred ccccccccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh----------hH
Confidence 999986542 12467899999999999999999999975321100 00
Q ss_pred cccchhhhccccCCCCC----HHHHHHHHHHHHhhcccCCCCCCCHHHHHH--HHHhc
Q 012213 408 SKEGVVKILDQRLSNTP----LSEAMQVFFVAMLCVQEHGVERPTMREVVQ--MLAQA 459 (468)
Q Consensus 408 ~~~~~~~~~d~~~~~~~----~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~--~L~~~ 459 (468)
.....+.......+ ......+.+++..|++.||++|||+.|+++ .+.+.
T Consensus 209 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~ 263 (299)
T 3m2w_A 209 ---GMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 263 (299)
T ss_dssp ---CSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTG
T ss_pred ---HHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcChhhccc
Confidence 00011111111111 123466888999999999999999999997 44443
No 247
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.8e-38 Score=301.21 Aligned_cols=233 Identities=15% Similarity=0.093 Sum_probs=183.2
Q ss_pred hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCC-CchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGS-SHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 258 (468)
..+|+..+.||+|+||.||+|.+. +++.||||++....... .....+.+|+..+.+++||||+++++++.+.+..++|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 456888899999999999999985 48999999986543322 2236789999999999999999999999999999999
Q ss_pred EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213 259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT 338 (468)
Q Consensus 259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 338 (468)
|||+++++|.+++... ....+..+++.|++.||+|||+.+ |+||||||+||+++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~-------- 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPA-------- 174 (286)
T ss_dssp EECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCC--------
T ss_pred EEecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEecc--------
Confidence 9999999999999532 355678899999999999999887 9999999999999999999998543
Q ss_pred CCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccc
Q 012213 339 GASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQ 418 (468)
Q Consensus 339 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 418 (468)
|++ .++.++||||||+++|||+||+.||.+....... ....+.+..
T Consensus 175 --------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~-------------~~~~~~~~~ 220 (286)
T 3uqc_A 175 --------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGL-------------APAERDTAG 220 (286)
T ss_dssp --------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCS-------------EECCBCTTS
T ss_pred --------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhh-------------HHHHHHhcc
Confidence 333 3689999999999999999999999864321100 000000000
Q ss_pred cCC---CCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCCC
Q 012213 419 RLS---NTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKPN 463 (468)
Q Consensus 419 ~~~---~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~~ 463 (468)
... .........+.+++.+||+.||++| |+.|+++.|+++...+
T Consensus 221 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 221 QPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp CBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred CCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 000 0011234567889999999999999 9999999999876544
No 248
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=8.8e-39 Score=338.89 Aligned_cols=239 Identities=23% Similarity=0.286 Sum_probs=190.6
Q ss_pred hhccCCcceEcccCCcceEEEEcC--CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCe----
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTP--NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKET---- 254 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~---- 254 (468)
.+.|+..+.||+|+||+||+|.+. +|+.||||++.... .......+.+|+.++.+++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 157 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSG-DAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP 157 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSC-CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccC-CHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence 467889999999999999999985 58999999886422 22233568899999999999999999999987665
Q ss_pred -eEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q 012213 255 -NLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAK 333 (468)
Q Consensus 255 -~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~ 333 (468)
.++||||+++++|.+++.. .+++.+++.++.||+.||.|||+.+ |+||||||+||+++.+ .+||+|||+++
T Consensus 158 ~~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~a~ 229 (681)
T 2pzi_A 158 VGYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAVS 229 (681)
T ss_dssp EEEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTTCE
T ss_pred eeEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEecccch
Confidence 6999999999999988753 5899999999999999999999887 9999999999999986 89999999998
Q ss_pred cccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchh
Q 012213 334 YLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVV 413 (468)
Q Consensus 334 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (468)
..... ....||+.|+|||++.+. ++.++|||||||++|||++|.+||.........
T Consensus 230 ~~~~~------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~----------------- 285 (681)
T 2pzi_A 230 RINSF------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDGLP----------------- 285 (681)
T ss_dssp ETTCC------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSSCC-----------------
T ss_pred hcccC------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccccccc-----------------
Confidence 76422 345689999999998765 489999999999999999999988642111000
Q ss_pred hhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCC-HHHHHHHHHh
Q 012213 414 KILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPT-MREVVQMLAQ 458 (468)
Q Consensus 414 ~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt-~~ev~~~L~~ 458 (468)
. ..........+.+++.+|++.||++||+ ++++.+.|..
T Consensus 286 ---~---~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 286 ---E---DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp ---T---TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred ---c---cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 0 0000122356778999999999999995 6666666654
No 249
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=5.1e-39 Score=320.85 Aligned_cols=243 Identities=16% Similarity=0.162 Sum_probs=180.7
Q ss_pred hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCC-CCCchhHHHHHHHHHhCCCC-CCccc---------eeE-
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITK-GSSHDNGLSAEIRTLGKIRH-RNIVR---------LKA- 247 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h-~niv~---------l~~- 247 (468)
...|...+.||+|+||+||+|.+ .+|+.||||++..... .....+.+.+|+.++..++| +|... ...
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 34577788999999999999996 5789999999874332 22334679999999999987 32211 111
Q ss_pred -----------EEec-----CCeeEEEEeccCCCChhhhcc-----cCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCe
Q 012213 248 -----------FCSN-----KETNLLVYEYMPNGSLGEVLH-----GKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLI 306 (468)
Q Consensus 248 -----------~~~~-----~~~~~lv~e~~~~gsL~~~l~-----~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~i 306 (468)
++.. ....+++|+++ +++|.+++. ......+++..++.++.||+.||+|||+.+ |
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---L 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---c
Confidence 1111 22346777765 689999884 233446889999999999999999999887 9
Q ss_pred eecCCCCCcEEEcCCCceEEeeccccccccccCCCccccccccCccccCcccc----------CCCCCCcchhhHHHHHH
Q 012213 307 IHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYA----------YTLKVDEKSDVYSFGVV 376 (468)
Q Consensus 307 vH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~Dv~s~G~~ 376 (468)
+||||||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||+
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvi 306 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLA 306 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHH
Confidence 99999999999999999999999999865422 344567 999999998 55668899999999999
Q ss_pred HHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213 377 LLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ 454 (468)
Q Consensus 377 l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~ 454 (468)
+|||+||+.||....... .....+... .. ....+.+++..||+.||++||++.|+++
T Consensus 307 l~elltg~~Pf~~~~~~~----------------~~~~~~~~~-~~----~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 307 IYWIWCADLPNTDDAALG----------------GSEWIFRSC-KN----IPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHHHHSSCCCCTTGGGS----------------CSGGGGSSC-CC----CCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHHCCCCCCCcchhh----------------hHHHHHhhc-cc----CCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 999999999997632111 111111111 11 2356888999999999999999777643
No 250
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=3.3e-37 Score=299.62 Aligned_cols=241 Identities=15% Similarity=0.148 Sum_probs=183.8
Q ss_pred hhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCC------CCCchhHHHHHHHHHhCCC---------CCCccce
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITK------GSSHDNGLSAEIRTLGKIR---------HRNIVRL 245 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~e~~~l~~l~---------h~niv~l 245 (468)
.++|+..+.||+|+||+||+|.+ +|+.||||++..... .....+.+.+|+.++++++ |||++++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46788899999999999999998 689999999975432 1222366889999988885 7777777
Q ss_pred eEEEe-----------------c-------------CCeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHH
Q 012213 246 KAFCS-----------------N-------------KETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGL 295 (468)
Q Consensus 246 ~~~~~-----------------~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l 295 (468)
.+.+. + .+..++||||+++|++.+.+.. ..+++..+..++.||+.||
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL 174 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASL 174 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHH
Confidence 66542 2 6788999999999987776643 3589999999999999999
Q ss_pred HHhh-hcCCCCeeecCCCCCcEEEcCCC--------------------ceEEeeccccccccccCCCccccccccCcccc
Q 012213 296 SYLH-HDCSPLIIHRDVKSNNILLNSDF--------------------EAHVADFGLAKYLQDTGASECMSAVAGSYGYI 354 (468)
Q Consensus 296 ~~LH-~~~~~~ivH~dlk~~Nill~~~~--------------------~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~ 354 (468)
+||| +.+ |+||||||+|||++.++ .+||+|||+|+.... ....||+.|+
T Consensus 175 ~~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-------~~~~gt~~y~ 244 (336)
T 2vuw_A 175 AVAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-------GIVVFCDVSM 244 (336)
T ss_dssp HHHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------TEEECCCCTT
T ss_pred HHHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------CcEEEeeccc
Confidence 9999 888 99999999999999887 899999999987652 1347899999
Q ss_pred CccccCCCCCCcchhhHHHHHH-HHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccccC---CCCCHHHHHH
Q 012213 355 APEYAYTLKVDEKSDVYSFGVV-LLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQRL---SNTPLSEAMQ 430 (468)
Q Consensus 355 aPE~~~~~~~~~~~Dv~s~G~~-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~---~~~~~~~~~~ 430 (468)
|||++.+.. +.++||||+|++ .+++++|..||.. ..|...... .+.+...... ..........
T Consensus 245 aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~--------~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~s~~ 311 (336)
T 2vuw_A 245 DEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN--------VLWLHYLTD----KMLKQMTFKTKCNTPAMKQIKRK 311 (336)
T ss_dssp CSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH--------HHHHHHHHH----HHHHTCCCSSCCCSHHHHHHHHH
T ss_pred ChhhhcCCC-ccceehhhhhCCCCcccccccCCCcc--------hhhhhHHHH----hhhhhhccCcccchhhhhhcCHH
Confidence 999998766 899999998777 7788889999742 122111110 0000000000 1112356778
Q ss_pred HHHHHHhhcccCCCCCCCHHHHH
Q 012213 431 VFFVAMLCVQEHGVERPTMREVV 453 (468)
Q Consensus 431 ~~~l~~~c~~~~P~~RPt~~ev~ 453 (468)
+.+++.+|++.| |++|++
T Consensus 312 ~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 312 IQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHHGGGSS-----SHHHHH
T ss_pred HHHHHHHHhccC-----CHHHHH
Confidence 999999999965 999887
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=3.3e-31 Score=273.54 Aligned_cols=186 Identities=19% Similarity=0.116 Sum_probs=128.4
Q ss_pred EcccCCcceEEEEc-CCCcEEEEEEecccCCCC--------CchhHHHHHHHHHhCC-CCCCccceeEEEecCCeeEEEE
Q 012213 190 IGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGS--------SHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKETNLLVY 259 (468)
Q Consensus 190 ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--------~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 259 (468)
.+.|+.|.+..++. .-|+.+|||.+....... ...++|.+|+++|+++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 44555555544332 347889999986543211 1124689999999999 6999999999999999999999
Q ss_pred eccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccC
Q 012213 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTG 339 (468)
Q Consensus 260 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 339 (468)
||++|++|.++|... .+++.. +|+.||+.||+|+|+.| ||||||||+|||+++++.+||+|||+|+......
T Consensus 322 Eyv~G~~L~d~i~~~--~~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 322 EKLPGRLLSDMLAAG--EEIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp ECCCSEEHHHHHHTT--CCCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred ecCCCCcHHHHHHhC--CCCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence 999999999999643 345543 58899999999999888 9999999999999999999999999998765322
Q ss_pred CCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCC
Q 012213 340 ASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRP 386 (468)
Q Consensus 340 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p 386 (468)
......+||++|+|||++.+ .+..++|+||+|++++++.++..|
T Consensus 394 --~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 394 --SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp --CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred --ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 23345679999999999876 467889999999998877665444
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.95 E-value=9.6e-29 Score=253.77 Aligned_cols=187 Identities=18% Similarity=0.206 Sum_probs=147.6
Q ss_pred CcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCc------hhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEE
Q 012213 186 DNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSH------DNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY 259 (468)
Q Consensus 186 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~------~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 259 (468)
..+.||+|+||+||+|.. .++.+++|+.......... .+++.+|++++++++||||+++..++...+..++||
T Consensus 340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence 356899999999999954 5788999987543222111 234789999999999999997777777788889999
Q ss_pred eccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccC
Q 012213 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTG 339 (468)
Q Consensus 260 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 339 (468)
||+++++|.+++.. +..++.|++.||+|||+.+ |+||||||+|||++. .+||+|||+++......
T Consensus 419 E~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 419 SYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp ECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred ECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 99999999999964 5689999999999999887 999999999999999 99999999999775321
Q ss_pred CCc-----cccccccCccccCccccCC--CCCCcchhhHHHHHHHHHHHhCCCCCC
Q 012213 340 ASE-----CMSAVAGSYGYIAPEYAYT--LKVDEKSDVYSFGVVLLELITGRRPVG 388 (468)
Q Consensus 340 ~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~~Dv~s~G~~l~elltg~~p~~ 388 (468)
... ......||+.|+|||++.. ..|+..+|+||..+-..+-+.++.+|.
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 111 1235679999999999876 568889999999999999888887764
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.90 E-value=1.2e-24 Score=205.10 Aligned_cols=145 Identities=16% Similarity=0.097 Sum_probs=115.1
Q ss_pred cCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCC----------------CchhHHHHHHHHHhCCCCCCccceeE
Q 012213 184 VKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGS----------------SHDNGLSAEIRTLGKIRHRNIVRLKA 247 (468)
Q Consensus 184 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~----------------~~~~~~~~e~~~l~~l~h~niv~l~~ 247 (468)
|...+.||+|+||.||+|.+.+|+.||||.+....... .....+.+|+.++++++ | +++.+
T Consensus 92 ~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~ 168 (282)
T 1zar_A 92 DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPK 168 (282)
T ss_dssp SEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCC
T ss_pred EEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCe
Confidence 44558999999999999999779999999986432111 02346889999999999 5 66666
Q ss_pred EEecCCeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEe
Q 012213 248 FCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVA 327 (468)
Q Consensus 248 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 327 (468)
++.. +..++||||+++|+|.+ +.. .....++.|++.||.|||+.+ |+||||||+|||++ ++.+||+
T Consensus 169 ~~~~-~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NILl~-~~~vkl~ 234 (282)
T 1zar_A 169 VYAW-EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLVS-EEGIWII 234 (282)
T ss_dssp EEEE-ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEE-TTEEEEC
T ss_pred EEec-cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHEEEE-CCcEEEE
Confidence 5543 55699999999999998 531 123479999999999999887 99999999999999 9999999
Q ss_pred eccccccccccCCCccccccccCccccCccccC
Q 012213 328 DFGLAKYLQDTGASECMSAVAGSYGYIAPEYAY 360 (468)
Q Consensus 328 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 360 (468)
|||+++. +..++|||++.
T Consensus 235 DFG~a~~---------------~~~~~a~e~l~ 252 (282)
T 1zar_A 235 DFPQSVE---------------VGEEGWREILE 252 (282)
T ss_dssp CCTTCEE---------------TTSTTHHHHHH
T ss_pred ECCCCeE---------------CCCCCHHHHHH
Confidence 9999863 33467888764
No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.81 E-value=3.6e-20 Score=172.34 Aligned_cols=138 Identities=21% Similarity=0.187 Sum_probs=105.0
Q ss_pred cCCcceEcccCCcceEEEEc-CCCcE--EEEEEecccCCCCC----------------------chhHHHHHHHHHhCCC
Q 012213 184 VKDNNVIGRGGAGVVYRGVT-PNGEQ--VAVKKLLGITKGSS----------------------HDNGLSAEIRTLGKIR 238 (468)
Q Consensus 184 ~~~~~~ig~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~~----------------------~~~~~~~e~~~l~~l~ 238 (468)
++..+.||+|+||.||+|.+ .+|+. ||||+++....... ....+.+|+..+.+++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 34568999999999999998 78989 99998754311100 0125788999999998
Q ss_pred CCCc--cceeEEEecCCeeEEEEeccCC-C----ChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhh-hcCCCCeeecC
Q 012213 239 HRNI--VRLKAFCSNKETNLLVYEYMPN-G----SLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLH-HDCSPLIIHRD 310 (468)
Q Consensus 239 h~ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH-~~~~~~ivH~d 310 (468)
|+++ ..++++ ...++||||+.+ | +|.++... .++..+..++.|++.||.||| +.+ |+|||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~g---ivHrD 196 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAE---LVHAD 196 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSC---EECSS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCC---EEeCC
Confidence 8764 334432 356899999942 4 56655432 224466789999999999999 888 99999
Q ss_pred CCCCcEEEcCCCceEEeeccccccc
Q 012213 311 VKSNNILLNSDFEAHVADFGLAKYL 335 (468)
Q Consensus 311 lk~~Nill~~~~~~kl~Dfgla~~~ 335 (468)
|||+|||++. .++|+|||+|...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999998 9999999999754
No 255
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.78 E-value=2.1e-19 Score=192.98 Aligned_cols=113 Identities=43% Similarity=0.709 Sum_probs=108.5
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|+|.+|.+|+++++|+.|+|++|+|+|.+|.+|++|++|+.||||+|+++|.+|..+..+++|+.|||++|+|+|
T Consensus 639 Ls~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g 718 (768)
T 3rgz_A 639 MSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSG 718 (768)
T ss_dssp CCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEE
T ss_pred CcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccccccCcccccCCCCCCCCCCCCCCCC
Q 012213 81 EIPEFGQYSFFNSTSFTGNPHLCGSYLNPCNYS 113 (468)
Q Consensus 81 ~~p~~~~~~~~~~~~~~~n~~lcg~~~~~c~~~ 113 (468)
.||..+.+..+...+|.||+++||.+..+|...
T Consensus 719 ~iP~~~~~~~~~~~~~~gN~~Lcg~~l~~C~~~ 751 (768)
T 3rgz_A 719 PIPEMGQFETFPPAKFLNNPGLCGYPLPRCDPS 751 (768)
T ss_dssp ECCSSSSGGGSCGGGGCSCTEEESTTSCCCCSC
T ss_pred cCCCchhhccCCHHHhcCCchhcCCCCcCCCCC
Confidence 999989999999999999999999887788643
No 256
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.70 E-value=2.5e-17 Score=159.32 Aligned_cols=139 Identities=12% Similarity=0.075 Sum_probs=98.6
Q ss_pred cCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCC------------CCchhH--------HHHHHHHHhCCCCCCcc
Q 012213 184 VKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKG------------SSHDNG--------LSAEIRTLGKIRHRNIV 243 (468)
Q Consensus 184 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~------------~~~~~~--------~~~e~~~l~~l~h~niv 243 (468)
|++.+.||+|++|.||+|.+.+|+.||||.++..... ...... ...|...|.++.+.++.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 6778999999999999999999999999987532110 000001 12355555555433332
Q ss_pred ceeEEEecCCeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC-
Q 012213 244 RLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF- 322 (468)
Q Consensus 244 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~- 322 (468)
...-+.. ...+|||||+++++|.++... +....++.|++.+|.|||+.| ||||||||.|||+++++
T Consensus 177 vp~p~~~--~~~~LVME~i~G~~L~~l~~~--------~~~~~l~~qll~~l~~lH~~g---IVHrDLKp~NILl~~dgd 243 (397)
T 4gyi_A 177 VPEPIAQ--SRHTIVMSLVDALPMRQVSSV--------PDPASLYADLIALILRLAKHG---LIHGDFNEFNILIREEKD 243 (397)
T ss_dssp CCCEEEE--ETTEEEEECCSCEEGGGCCCC--------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEEEEEC
T ss_pred CCeeeec--cCceEEEEecCCccHhhhccc--------HHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeCCCC
Confidence 2111111 124799999999998776532 123567899999999999888 99999999999998876
Q ss_pred ---------ceEEeeccccccc
Q 012213 323 ---------EAHVADFGLAKYL 335 (468)
Q Consensus 323 ---------~~kl~Dfgla~~~ 335 (468)
.+.|+||+-+...
T Consensus 244 ~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 244 AEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp SSCTTSEEEEEEECCCTTCEET
T ss_pred cccccccccceEEEEeCCcccC
Confidence 3899999987654
No 257
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.64 E-value=1.7e-16 Score=151.82 Aligned_cols=109 Identities=31% Similarity=0.465 Sum_probs=99.6
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++.+|..++++++|+.|+|++|++++.+|. +..+++|++|+|++|.++|.+|..|..+++|+.|+|++|+++|
T Consensus 204 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 282 (313)
T 1ogq_A 204 LSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCG 282 (313)
T ss_dssp CCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEE
T ss_pred CcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccc
Confidence 578888888888889999999999999999976665 8899999999999999999999999999999999999999999
Q ss_pred CCCCcccccccCcccccCCCCCCCCCCCCC
Q 012213 81 EIPEFGQYSFFNSTSFTGNPHLCGSYLNPC 110 (468)
Q Consensus 81 ~~p~~~~~~~~~~~~~~~n~~lcg~~~~~c 110 (468)
.+|..+.+..+..+++.+|+++||.+...|
T Consensus 283 ~ip~~~~l~~L~~l~l~~N~~lc~~p~~~C 312 (313)
T 1ogq_A 283 EIPQGGNLQRFDVSAYANNKCLCGSPLPAC 312 (313)
T ss_dssp ECCCSTTGGGSCGGGTCSSSEEESTTSSCC
T ss_pred cCCCCccccccChHHhcCCCCccCCCCCCC
Confidence 999988999999999999999999876666
No 258
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.61 E-value=8.6e-16 Score=136.09 Aligned_cols=105 Identities=26% Similarity=0.396 Sum_probs=92.5
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|+ .+|..|.++++|+.|+|++|+|++..|..|.++++|++|+|++|.|++..|..|..+++|+.|+|++|+|++
T Consensus 38 L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~ 116 (193)
T 2wfh_A 38 LDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISV 116 (193)
T ss_dssp CCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCB
T ss_pred CCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCe
Confidence 5789998 888999999999999999999997666789999999999999999997666689999999999999999997
Q ss_pred CCCC-cccccccCcccccCCCCCCCCC
Q 012213 81 EIPE-FGQYSFFNSTSFTGNPHLCGSY 106 (468)
Q Consensus 81 ~~p~-~~~~~~~~~~~~~~n~~lcg~~ 106 (468)
.++. +..+.++..+++++|++.|.+.
T Consensus 117 ~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 117 VPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred eChhhhhcCccccEEEeCCCCeecCCc
Confidence 7664 7788899999999999988764
No 259
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.61 E-value=8.3e-16 Score=136.10 Aligned_cols=105 Identities=21% Similarity=0.319 Sum_probs=92.0
Q ss_pred CCCCcccccCCc-ccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccC
Q 012213 1 MSRNNFSGIIPV-EIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFS 79 (468)
Q Consensus 1 l~~N~l~g~~p~-~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~ 79 (468)
|++|+|++..|. .++++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|+
T Consensus 36 l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 115 (192)
T 1w8a_A 36 LNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQIS 115 (192)
T ss_dssp CCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCC
T ss_pred CCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCC
Confidence 578999855553 4899999999999999999888999999999999999999999877777999999999999999999
Q ss_pred CCCCC-cccccccCcccccCCCCCCCC
Q 012213 80 GEIPE-FGQYSFFNSTSFTGNPHLCGS 105 (468)
Q Consensus 80 ~~~p~-~~~~~~~~~~~~~~n~~lcg~ 105 (468)
+.+|. +..+.++..+++++|++.|.+
T Consensus 116 ~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 116 CVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp EECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred eeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 98874 788889999999999988765
No 260
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.59 E-value=1.6e-15 Score=137.39 Aligned_cols=99 Identities=16% Similarity=0.114 Sum_probs=46.7
Q ss_pred CCCCcccccCC-cccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccC
Q 012213 1 MSRNNFSGIIP-VEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFS 79 (468)
Q Consensus 1 l~~N~l~g~~p-~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~ 79 (468)
|++|+|++..| ..|+++++|+.|+|++|+|++..|..|.++++|++|+|++|.+++..|..|..+++|+.|+|++|+|+
T Consensus 39 L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 118 (220)
T 2v70_A 39 LNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRIT 118 (220)
T ss_dssp CCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCC
T ss_pred cCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCC
Confidence 34555554333 22445555555555555555333334555555555555555554333333444555555555555555
Q ss_pred CCCCC-cccccccCcccccCC
Q 012213 80 GEIPE-FGQYSFFNSTSFTGN 99 (468)
Q Consensus 80 ~~~p~-~~~~~~~~~~~~~~n 99 (468)
+.+|. +..+.++..+++++|
T Consensus 119 ~~~~~~~~~l~~L~~L~L~~N 139 (220)
T 2v70_A 119 CVGNDSFIGLSSVRLLSLYDN 139 (220)
T ss_dssp CBCTTSSTTCTTCSEEECTTS
T ss_pred eECHhHcCCCccCCEEECCCC
Confidence 44432 444444444444444
No 261
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.58 E-value=3.2e-15 Score=129.53 Aligned_cols=102 Identities=19% Similarity=0.243 Sum_probs=91.5
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
+++|+|+ .+|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++
T Consensus 16 ~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~ 92 (170)
T 3g39_A 16 CSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKS 92 (170)
T ss_dssp CTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred eCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCE
Confidence 5789998 7898774 899999999999998778899999999999999999996445557899999999999999998
Q ss_pred CCCC-cccccccCcccccCCCCCCCC
Q 012213 81 EIPE-FGQYSFFNSTSFTGNPHLCGS 105 (468)
Q Consensus 81 ~~p~-~~~~~~~~~~~~~~n~~lcg~ 105 (468)
.+|. +..+.++..+++++|++.|.+
T Consensus 93 ~~~~~~~~l~~L~~L~L~~N~~~c~c 118 (170)
T 3g39_A 93 IPRGAFDNLKSLTHIWLLNNPWDCAC 118 (170)
T ss_dssp CCTTTTTTCTTCCEEECCSSCBCTTB
T ss_pred eCHHHhcCCCCCCEEEeCCCCCCCCc
Confidence 8885 888999999999999998875
No 262
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.58 E-value=3.5e-15 Score=129.75 Aligned_cols=101 Identities=20% Similarity=0.261 Sum_probs=90.9
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCc-ccccccccccccccCcccC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPK-EMGNMKSLTSADFSHNNFS 79 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~l~~L~~l~ls~N~l~ 79 (468)
+++|+|+ .+|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++ +|+ .|..+++|+.|+|++|+|+
T Consensus 19 ~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-i~~~~~~~l~~L~~L~L~~N~l~ 94 (174)
T 2r9u_A 19 CQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTA-IPTGVFDKLTQLTQLDLNDNHLK 94 (174)
T ss_dssp CCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCC
T ss_pred eCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCc-cChhHhCCcchhhEEECCCCccc
Confidence 5789997 8998775 899999999999998778899999999999999999996 655 4689999999999999999
Q ss_pred CCCCC-cccccccCcccccCCCCCCCC
Q 012213 80 GEIPE-FGQYSFFNSTSFTGNPHLCGS 105 (468)
Q Consensus 80 ~~~p~-~~~~~~~~~~~~~~n~~lcg~ 105 (468)
+.++. +..+.++..+++++|++.|.+
T Consensus 95 ~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 95 SIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred eeCHHHhccccCCCEEEeCCCCccccc
Confidence 88776 888999999999999988765
No 263
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.57 E-value=2.2e-17 Score=167.72 Aligned_cols=99 Identities=20% Similarity=0.226 Sum_probs=86.2
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCcccc-ccccccEeeccCCcccccCCcccccccccccccccCcccC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQIT-QIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFS 79 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~-~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~ 79 (468)
|++|+|++..|..++++++|+.|+|++|+|++.+|..+. ++++|+.|+|++|.|++ +|+ +..+++|+.|+|++|+|+
T Consensus 127 L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~-~~~-~~~l~~L~~L~Ls~N~l~ 204 (487)
T 3oja_A 127 LANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD-VKG-QVVFAKLKTLDLSSNKLA 204 (487)
T ss_dssp CCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE-EEC-CCCCTTCCEEECCSSCCC
T ss_pred CCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccc-ccc-cccCCCCCEEECCCCCCC
Confidence 578999988888999999999999999999988888886 79999999999999986 443 446899999999999999
Q ss_pred CCCCCcccccccCcccccCCCC
Q 012213 80 GEIPEFGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 80 ~~~p~~~~~~~~~~~~~~~n~~ 101 (468)
+.+|.+..+.++..+++++|..
T Consensus 205 ~~~~~~~~l~~L~~L~Ls~N~l 226 (487)
T 3oja_A 205 FMGPEFQSAAGVTWISLRNNKL 226 (487)
T ss_dssp EECGGGGGGTTCSEEECTTSCC
T ss_pred CCCHhHcCCCCccEEEecCCcC
Confidence 8888888888999999998854
No 264
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.56 E-value=4.5e-15 Score=134.36 Aligned_cols=99 Identities=24% Similarity=0.262 Sum_probs=55.5
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcc-cccccccccccccCcccC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKE-MGNMKSLTSADFSHNNFS 79 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~l~~L~~l~ls~N~l~ 79 (468)
|++|+|++..|..|..+++|+.|+|++|+|++..|..|.++++|++|+|++|.|+ .+|+. |..+++|+.|+|++|+|+
T Consensus 39 l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~N~l~ 117 (220)
T 2v9t_B 39 LEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT-ELPKSLFEGLFSLQLLLLNANKIN 117 (220)
T ss_dssp CCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCC-ccCHhHccCCCCCCEEECCCCCCC
Confidence 3556666444445666666666666666666555556666666666666666665 34333 455555666666666655
Q ss_pred CCCCC-cccccccCcccccCCC
Q 012213 80 GEIPE-FGQYSFFNSTSFTGNP 100 (468)
Q Consensus 80 ~~~p~-~~~~~~~~~~~~~~n~ 100 (468)
+.+|. +..+.++..+++++|.
T Consensus 118 ~~~~~~~~~l~~L~~L~L~~N~ 139 (220)
T 2v9t_B 118 CLRVDAFQDLHNLNLLSLYDNK 139 (220)
T ss_dssp CCCTTTTTTCTTCCEEECCSSC
T ss_pred EeCHHHcCCCCCCCEEECCCCc
Confidence 55442 4455555555555553
No 265
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.52 E-value=7.1e-15 Score=157.76 Aligned_cols=99 Identities=27% Similarity=0.510 Sum_probs=95.2
Q ss_pred CCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCCC
Q 012213 2 SRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSGE 81 (468)
Q Consensus 2 ~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~ 81 (468)
+.|.++|.+|..++++++|+.|||++|+|+|.+|.+|++|++|+.|||++|+++|.+|..|+++++|+.|||++|+|+|.
T Consensus 616 ~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ 695 (768)
T 3rgz_A 616 TSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGR 695 (768)
T ss_dssp TSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEC
T ss_pred ccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCc
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC-cccccccCcccccCCC
Q 012213 82 IPE-FGQYSFFNSTSFTGNP 100 (468)
Q Consensus 82 ~p~-~~~~~~~~~~~~~~n~ 100 (468)
+|. +..+.++..+++++|+
T Consensus 696 ip~~l~~l~~L~~L~ls~N~ 715 (768)
T 3rgz_A 696 IPQAMSALTMLTEIDLSNNN 715 (768)
T ss_dssp CCGGGGGCCCCSEEECCSSE
T ss_pred CChHHhCCCCCCEEECcCCc
Confidence 995 8889999999999885
No 266
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.52 E-value=2.1e-14 Score=130.84 Aligned_cols=101 Identities=15% Similarity=0.135 Sum_probs=73.0
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++..|..|+++++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|+.
T Consensus 47 Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~ 126 (229)
T 3e6j_A 47 LHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTE 126 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCS
T ss_pred cCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCcccc
Confidence 57788887777778888888888888888873333456778888888888888875444456777888888888888874
Q ss_pred CCCCcccccccCcccccCCCC
Q 012213 81 EIPEFGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 81 ~~p~~~~~~~~~~~~~~~n~~ 101 (468)
.++.+..+.++..+++++|..
T Consensus 127 lp~~~~~l~~L~~L~L~~N~l 147 (229)
T 3e6j_A 127 LPRGIERLTHLTHLALDQNQL 147 (229)
T ss_dssp CCTTGGGCTTCSEEECCSSCC
T ss_pred cCcccccCCCCCEEECCCCcC
Confidence 434566777777777777743
No 267
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.52 E-value=2.6e-14 Score=124.65 Aligned_cols=104 Identities=17% Similarity=0.205 Sum_probs=71.3
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++..|..++++++|++|+|++|+|++..|..+.++++|+.|+|++|.+++..|..+..+++|+.|++++|++++
T Consensus 35 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 114 (177)
T 2o6r_A 35 LESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKS 114 (177)
T ss_dssp CCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred eCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceE
Confidence 46677775445556777777777777777774444456777777777777777775444456777777777777777776
Q ss_pred CCCC-cccccccCcccccCCCCCCC
Q 012213 81 EIPE-FGQYSFFNSTSFTGNPHLCG 104 (468)
Q Consensus 81 ~~p~-~~~~~~~~~~~~~~n~~lcg 104 (468)
.++. +..+.++..+++++|++.|.
T Consensus 115 ~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 115 VPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp CCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred eCHHHhcCCcccCEEEecCCCeecc
Confidence 5554 45667777777777766654
No 268
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.50 E-value=3.4e-14 Score=137.87 Aligned_cols=103 Identities=17% Similarity=0.154 Sum_probs=90.5
Q ss_pred CCC-cccccCCcccccCCCCCEEEccC-CcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccC
Q 012213 2 SRN-NFSGIIPVEIGHCLLLTYLDLSQ-NHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFS 79 (468)
Q Consensus 2 ~~N-~l~g~~p~~~~~l~~L~~L~l~~-n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~ 79 (468)
++| +|+ .||. |+.+++|+.|+|++ |+|++..|..|++|++|+.|+|++|+|++..|..|.+|++|+.|+|++|+|+
T Consensus 16 ~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 93 (347)
T 2ifg_A 16 TRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE 93 (347)
T ss_dssp CSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCS
T ss_pred CCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccc
Confidence 455 898 6998 99999999999996 9999766688999999999999999999988888999999999999999999
Q ss_pred CCCCCcccccccCcccccCCCCCCCCC
Q 012213 80 GEIPEFGQYSFFNSTSFTGNPHLCGSY 106 (468)
Q Consensus 80 ~~~p~~~~~~~~~~~~~~~n~~lcg~~ 106 (468)
+.+|.......+..+.+.+|++.|.|.
T Consensus 94 ~~~~~~~~~~~L~~l~l~~N~~~c~c~ 120 (347)
T 2ifg_A 94 SLSWKTVQGLSLQELVLSGNPLHCSCA 120 (347)
T ss_dssp CCCSTTTCSCCCCEEECCSSCCCCCGG
T ss_pred eeCHHHcccCCceEEEeeCCCccCCCc
Confidence 887764333348999999999998763
No 269
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.46 E-value=1.4e-13 Score=127.18 Aligned_cols=101 Identities=16% Similarity=0.168 Sum_probs=75.6
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|.+++..|..|..+++|+.|+|++|+|++
T Consensus 66 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 145 (251)
T 3m19_A 66 LDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQS 145 (251)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCc
Confidence 56788887666777888888888888888885555667788888888888888885444446778888888888888887
Q ss_pred CCC-CcccccccCcccccCCCC
Q 012213 81 EIP-EFGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 81 ~~p-~~~~~~~~~~~~~~~n~~ 101 (468)
.+| .+..+.++..+++++|..
T Consensus 146 ~~~~~~~~l~~L~~L~L~~N~l 167 (251)
T 3m19_A 146 IPAGAFDKLTNLQTLSLSTNQL 167 (251)
T ss_dssp CCTTTTTTCTTCCEEECCSSCC
T ss_pred cCHHHcCcCcCCCEEECCCCcC
Confidence 666 367777777777777753
No 270
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.46 E-value=1.7e-13 Score=122.71 Aligned_cols=101 Identities=19% Similarity=0.194 Sum_probs=71.4
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++..+..++++++|++|+|++|+|++..+..|.++++|++|+|++|.+++..+..|..+++|+.|++++|++++
T Consensus 35 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 114 (208)
T 2o6s_A 35 LETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQS 114 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred cCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcc
Confidence 56777875545556778888888888888874434456778888888888888875434446777788888888888776
Q ss_pred CCCC-cccccccCcccccCCCC
Q 012213 81 EIPE-FGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 81 ~~p~-~~~~~~~~~~~~~~n~~ 101 (468)
.++. +..+.++..+++++|..
T Consensus 115 ~~~~~~~~l~~L~~L~l~~N~l 136 (208)
T 2o6s_A 115 LPDGVFDKLTQLKDLRLYQNQL 136 (208)
T ss_dssp CCTTTTTTCTTCCEEECCSSCC
T ss_pred cCHhHhccCCcCCEEECCCCcc
Confidence 6664 56677777777777743
No 271
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.45 E-value=1.6e-13 Score=128.45 Aligned_cols=100 Identities=20% Similarity=0.223 Sum_probs=66.7
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++..|..++++++|++|+|++|++++..|..++++++|++|+|++|.+++..|..+..+++|+.|++++|++++
T Consensus 92 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 171 (272)
T 3rfs_A 92 LTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS 171 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCc
Confidence 46677775555556777777777777777775555556777777777777777775444445677777777777777776
Q ss_pred CCCC-cccccccCcccccCCC
Q 012213 81 EIPE-FGQYSFFNSTSFTGNP 100 (468)
Q Consensus 81 ~~p~-~~~~~~~~~~~~~~n~ 100 (468)
.+|. +..+.++..+++++|.
T Consensus 172 ~~~~~~~~l~~L~~L~L~~N~ 192 (272)
T 3rfs_A 172 LPEGVFDKLTQLKDLRLYQNQ 192 (272)
T ss_dssp CCTTTTTTCTTCCEEECCSSC
T ss_pred cCHHHhcCCccCCEEECCCCc
Confidence 5554 4566666667776664
No 272
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.45 E-value=4e-14 Score=135.32 Aligned_cols=101 Identities=29% Similarity=0.542 Sum_probs=94.2
Q ss_pred CCCCcccc--cCCcccccCCCCCEEEccC-CcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcc
Q 012213 1 MSRNNFSG--IIPVEIGHCLLLTYLDLSQ-NHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNN 77 (468)
Q Consensus 1 l~~N~l~g--~~p~~~~~l~~L~~L~l~~-n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~ 77 (468)
|++|+|+| .+|..++++++|++|+|++ |+++|.+|..|+++++|++|+|++|.++|.+|..|..+++|+.|++++|+
T Consensus 57 L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 136 (313)
T 1ogq_A 57 LSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNA 136 (313)
T ss_dssp EECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSE
T ss_pred CCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCc
Confidence 46899999 8999999999999999995 99999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCC-cccccccCcccccCCCC
Q 012213 78 FSGEIPE-FGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 78 l~~~~p~-~~~~~~~~~~~~~~n~~ 101 (468)
+++.+|. +..+.++..+++++|..
T Consensus 137 l~~~~p~~~~~l~~L~~L~L~~N~l 161 (313)
T 1ogq_A 137 LSGTLPPSISSLPNLVGITFDGNRI 161 (313)
T ss_dssp EESCCCGGGGGCTTCCEEECCSSCC
T ss_pred cCCcCChHHhcCCCCCeEECcCCcc
Confidence 9998884 88899999999998853
No 273
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.44 E-value=9.7e-14 Score=145.45 Aligned_cols=106 Identities=25% Similarity=0.311 Sum_probs=94.2
Q ss_pred CCCCcc-cccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccC
Q 012213 1 MSRNNF-SGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFS 79 (468)
Q Consensus 1 l~~N~l-~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~ 79 (468)
|++|++ .+.+|..|..+++|++|||++|+|++..|..|.+|++|+.|+|++|+|++..|..|..+++|+.|||++|+|+
T Consensus 476 Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~ 555 (635)
T 4g8a_A 476 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIM 555 (635)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCC
T ss_pred hhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCC
Confidence 467764 4457888999999999999999999888999999999999999999999877778999999999999999999
Q ss_pred CCCCC-cccc-cccCcccccCCCCCCCCC
Q 012213 80 GEIPE-FGQY-SFFNSTSFTGNPHLCGSY 106 (468)
Q Consensus 80 ~~~p~-~~~~-~~~~~~~~~~n~~lcg~~ 106 (468)
+.+|. +..+ .++..+++++||+.|.|.
T Consensus 556 ~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 556 TSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp BCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 99885 6666 578999999999999874
No 274
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.44 E-value=1.8e-13 Score=129.19 Aligned_cols=100 Identities=19% Similarity=0.179 Sum_probs=70.5
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|+ .+|..+..+++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|..+++|+.|+|++|+|++
T Consensus 84 Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 162 (290)
T 1p9a_G 84 LSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTE 162 (290)
T ss_dssp CCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSC
T ss_pred CCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCc
Confidence 5677777 677777777778888888888775445667777777777777777775444446677777777777777775
Q ss_pred CCCC-cccccccCcccccCCCC
Q 012213 81 EIPE-FGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 81 ~~p~-~~~~~~~~~~~~~~n~~ 101 (468)
.++. +..+.++..+++++|..
T Consensus 163 l~~~~~~~l~~L~~L~L~~N~l 184 (290)
T 1p9a_G 163 LPAGLLNGLENLDTLLLQENSL 184 (290)
T ss_dssp CCTTTTTTCTTCCEEECCSSCC
T ss_pred cCHHHhcCcCCCCEEECCCCcC
Confidence 5554 45666677777766643
No 275
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.44 E-value=1.8e-13 Score=123.70 Aligned_cols=104 Identities=18% Similarity=0.286 Sum_probs=73.2
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCc-cccccccccEeeccCCcccccCCcccccccccccccccCcccC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPV-QITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFS 79 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~-~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~ 79 (468)
|++|+|++..|..|.++++|++|+|++|+|+ .+|. .|.++++|++|+|++|.+++..|..|..+++|+.|+|++|+|+
T Consensus 63 Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 141 (220)
T 2v9t_B 63 LSNNQISELAPDAFQGLRSLNSLVLYGNKIT-ELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQ 141 (220)
T ss_dssp CCSSCCCEECTTTTTTCSSCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCCcCCCcCHHHhhCCcCCCEEECCCCcCC-ccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCC
Confidence 4677777666777777777777777777777 4444 3567777777777777777655666777777777777777777
Q ss_pred CCCCC-cccccccCcccccCCCCCCCC
Q 012213 80 GEIPE-FGQYSFFNSTSFTGNPHLCGS 105 (468)
Q Consensus 80 ~~~p~-~~~~~~~~~~~~~~n~~lcg~ 105 (468)
+.++. +..+.++..+++++|++.|.+
T Consensus 142 ~~~~~~~~~l~~L~~L~L~~N~~~c~c 168 (220)
T 2v9t_B 142 TIAKGTFSPLRAIQTMHLAQNPFICDC 168 (220)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred EECHHHHhCCCCCCEEEeCCCCcCCCC
Confidence 66664 666667777777777777654
No 276
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.43 E-value=1.8e-13 Score=123.71 Aligned_cols=105 Identities=15% Similarity=0.184 Sum_probs=80.9
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++..|..|+++++|+.|+|++|+|++..|..|.++++|++|+|++|.+++..|..|..+++|+.|+|++|+|++
T Consensus 64 L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 143 (220)
T 2v70_A 64 FSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITT 143 (220)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCC
T ss_pred CCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCE
Confidence 56788886666678888888888888888886555567888888888888888887667778888888888888888887
Q ss_pred CCC-CcccccccCcccccCCCCCCCC
Q 012213 81 EIP-EFGQYSFFNSTSFTGNPHLCGS 105 (468)
Q Consensus 81 ~~p-~~~~~~~~~~~~~~~n~~lcg~ 105 (468)
.+| .+..+.++..+++++|++.|.+
T Consensus 144 ~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 144 VAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp BCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred ECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 766 4677777788888888877764
No 277
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.42 E-value=8.8e-14 Score=123.00 Aligned_cols=105 Identities=24% Similarity=0.358 Sum_probs=86.6
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++..|..|+++++|+.|+|++|+|++..|..|.++++|++|+|++|+|++.+|..|..+++|+.|+|++|.+++
T Consensus 61 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 140 (192)
T 1w8a_A 61 LKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNC 140 (192)
T ss_dssp CCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCC
T ss_pred CCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccC
Confidence 68999998889999999999999999999998788889999999999999999999889999999999999999999998
Q ss_pred CCCCcccccccCcccccCCCCCCCC
Q 012213 81 EIPEFGQYSFFNSTSFTGNPHLCGS 105 (468)
Q Consensus 81 ~~p~~~~~~~~~~~~~~~n~~lcg~ 105 (468)
..+-..-...+....+.++...|+.
T Consensus 141 ~c~l~~~~~~l~~~~~~~~~~~C~~ 165 (192)
T 1w8a_A 141 NCHLAWFAEWLRKKSLNGGAARCGA 165 (192)
T ss_dssp SGGGHHHHHHHHHHCCSGGGCBBCS
T ss_pred cCcchHHHHHHHHcCCCCCCCCCCC
Confidence 7763111112222344445455543
No 278
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.42 E-value=4e-13 Score=125.50 Aligned_cols=99 Identities=17% Similarity=0.264 Sum_probs=52.8
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++..+..+.++++|++|+|++|++++..|..|.++++|++|+|++|.+++..+..|..+++|+.|++++|++++
T Consensus 92 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 171 (270)
T 2o6q_A 92 VTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKR 171 (270)
T ss_dssp CCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcE
Confidence 34566654334445556666666666666664444445555566666666655553222235555555555555555555
Q ss_pred CCCC-cccccccCcccccCC
Q 012213 81 EIPE-FGQYSFFNSTSFTGN 99 (468)
Q Consensus 81 ~~p~-~~~~~~~~~~~~~~n 99 (468)
.++. +..+.++..+++++|
T Consensus 172 ~~~~~~~~l~~L~~L~L~~N 191 (270)
T 2o6q_A 172 VPEGAFDKLTELKTLKLDNN 191 (270)
T ss_dssp CCTTTTTTCTTCCEEECCSS
T ss_pred eChhHhccCCCcCEEECCCC
Confidence 4442 444555555555555
No 279
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.41 E-value=3.5e-13 Score=122.65 Aligned_cols=93 Identities=22% Similarity=0.247 Sum_probs=43.6
Q ss_pred CCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCC-cccccccccccccccCcccCCC
Q 012213 3 RNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLP-KEMGNMKSLTSADFSHNNFSGE 81 (468)
Q Consensus 3 ~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p-~~~~~l~~L~~l~ls~N~l~~~ 81 (468)
+|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|+|++ +| ..|..+++|+.|+|++|+|++.
T Consensus 28 ~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~-i~~~~~~~l~~L~~L~Ls~N~l~~l 103 (229)
T 3e6j_A 28 SKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGA-LPVGVFDSLTQLTVLDLGTNQLTVL 103 (229)
T ss_dssp TSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCC-cChhhcccCCCcCEEECCCCcCCcc
Confidence 34443 4444332 445555555555554444445555555555555555542 32 2334455555555555555544
Q ss_pred CCC-cccccccCcccccCC
Q 012213 82 IPE-FGQYSFFNSTSFTGN 99 (468)
Q Consensus 82 ~p~-~~~~~~~~~~~~~~n 99 (468)
++. +..+.++..+++++|
T Consensus 104 ~~~~~~~l~~L~~L~Ls~N 122 (229)
T 3e6j_A 104 PSAVFDRLVHLKELFMCCN 122 (229)
T ss_dssp CTTTTTTCTTCCEEECCSS
T ss_pred ChhHhCcchhhCeEeccCC
Confidence 432 344444455555444
No 280
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.41 E-value=9.4e-14 Score=117.40 Aligned_cols=98 Identities=14% Similarity=0.138 Sum_probs=87.9
Q ss_pred CCCCccc-ccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccC
Q 012213 1 MSRNNFS-GIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFS 79 (468)
Q Consensus 1 l~~N~l~-g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~ 79 (468)
|++|+++ |.+|..++.+++|+.|+|++|++++. ..++++++|++|+|++|.+++.+|..+..+++|+.|++++|+++
T Consensus 24 l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~ 101 (149)
T 2je0_A 24 LDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIK 101 (149)
T ss_dssp CTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCC
T ss_pred ccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCC
Confidence 5789998 89999999999999999999999954 78999999999999999999778888888999999999999999
Q ss_pred CCC--CCcccccccCcccccCCC
Q 012213 80 GEI--PEFGQYSFFNSTSFTGNP 100 (468)
Q Consensus 80 ~~~--p~~~~~~~~~~~~~~~n~ 100 (468)
+.. +.+..++++..+++++|+
T Consensus 102 ~~~~~~~~~~l~~L~~L~l~~N~ 124 (149)
T 2je0_A 102 DLSTIEPLKKLENLKSLDLFNCE 124 (149)
T ss_dssp SHHHHGGGGGCTTCCEEECTTCG
T ss_pred ChHHHHHHhhCCCCCEEeCcCCc
Confidence 843 467888899999999885
No 281
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.40 E-value=3.8e-13 Score=135.35 Aligned_cols=103 Identities=19% Similarity=0.226 Sum_probs=48.6
Q ss_pred CCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCCC
Q 012213 2 SRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSGE 81 (468)
Q Consensus 2 ~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~ 81 (468)
++|+|++..|..|+++++|++|+|++|++++..|..+.++++|++|+|++|.+++..|..|..+++|+.|++++|++++.
T Consensus 307 s~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 386 (455)
T 3v47_A 307 AQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSV 386 (455)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccC
Confidence 34444444444444444444444444444443344444445555555555555444444444455555555555555443
Q ss_pred CCC-cccccccCcccccCCCCCCC
Q 012213 82 IPE-FGQYSFFNSTSFTGNPHLCG 104 (468)
Q Consensus 82 ~p~-~~~~~~~~~~~~~~n~~lcg 104 (468)
++. +..+.++..+++++|+..|.
T Consensus 387 ~~~~~~~l~~L~~L~l~~N~l~~~ 410 (455)
T 3v47_A 387 PDGIFDRLTSLQKIWLHTNPWDCS 410 (455)
T ss_dssp CTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CHhHhccCCcccEEEccCCCcccC
Confidence 332 34444445555555544444
No 282
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.39 E-value=1.9e-13 Score=117.98 Aligned_cols=99 Identities=16% Similarity=0.174 Sum_probs=85.3
Q ss_pred CCCCccc-ccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccC
Q 012213 1 MSRNNFS-GIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFS 79 (468)
Q Consensus 1 l~~N~l~-g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~ 79 (468)
|++|+|+ |.+|..+..+++|+.|+|++|++++ + ..+..+++|++|+|++|.+++.+|..+..+++|+.|++++|+++
T Consensus 31 l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 108 (168)
T 2ell_A 31 LDNCKSNDGKIEGLTAEFVNLEFLSLINVGLIS-V-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLK 108 (168)
T ss_dssp CCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCC-C-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCC
T ss_pred CCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCC-h-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccC
Confidence 5788998 8899888999999999999999995 4 78899999999999999999778887878999999999999998
Q ss_pred CCC--CCcccccccCcccccCCCC
Q 012213 80 GEI--PEFGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 80 ~~~--p~~~~~~~~~~~~~~~n~~ 101 (468)
+.+ +.+..+.++..+++++|+.
T Consensus 109 ~~~~~~~l~~l~~L~~L~l~~N~l 132 (168)
T 2ell_A 109 DISTLEPLKKLECLKSLDLFNCEV 132 (168)
T ss_dssp SSGGGGGGSSCSCCCEEECCSSGG
T ss_pred cchhHHHHhcCCCCCEEEeeCCcC
Confidence 754 4577888888899988853
No 283
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.39 E-value=3.1e-13 Score=141.82 Aligned_cols=71 Identities=11% Similarity=0.171 Sum_probs=55.5
Q ss_pred cccccCCccccccccccEeeccCCccccc-----------------CCcccc--cccccccccccCcccCCCCCC-cccc
Q 012213 29 HLSGPIPVQITQIHILNYLNVSWNQLNAS-----------------LPKEMG--NMKSLTSADFSHNNFSGEIPE-FGQY 88 (468)
Q Consensus 29 ~l~g~~p~~~~~l~~L~~l~ls~N~l~g~-----------------~p~~~~--~l~~L~~l~ls~N~l~~~~p~-~~~~ 88 (468)
+|+| ||.+|+++++|++|+|++|.|+|. +|+.++ ++++|+.|++++|+++|.+|. ++.+
T Consensus 194 ~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 272 (636)
T 4eco_A 194 NITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKAL 272 (636)
T ss_dssp EEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTC
T ss_pred CCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcC
Confidence 4555 788888888888888888888875 888877 888888888888888887774 7777
Q ss_pred cccCcccccCCC
Q 012213 89 SFFNSTSFTGNP 100 (468)
Q Consensus 89 ~~~~~~~~~~n~ 100 (468)
.++..+++++|.
T Consensus 273 ~~L~~L~Ls~n~ 284 (636)
T 4eco_A 273 PEMQLINVACNR 284 (636)
T ss_dssp SSCCEEECTTCT
T ss_pred CCCCEEECcCCC
Confidence 778888887775
No 284
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.38 E-value=4.3e-13 Score=138.20 Aligned_cols=96 Identities=21% Similarity=0.298 Sum_probs=89.5
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++ +|. +++|++|+.|+|++|+|+ .+|..|++|++|+.|+|++|.|++ +| .++.+++|+.|+|++|+|++
T Consensus 448 Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~ 522 (567)
T 1dce_A 448 LAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQ 522 (567)
T ss_dssp CTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCS
T ss_pred ecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCC
Confidence 68999995 886 999999999999999999 999999999999999999999996 88 89999999999999999999
Q ss_pred CC-C-CcccccccCcccccCCCC
Q 012213 81 EI-P-EFGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 81 ~~-p-~~~~~~~~~~~~~~~n~~ 101 (468)
.+ | .++.++++..+++++|+.
T Consensus 523 ~~~p~~l~~l~~L~~L~L~~N~l 545 (567)
T 1dce_A 523 SAAIQPLVSCPRLVLLNLQGNSL 545 (567)
T ss_dssp SSTTGGGGGCTTCCEEECTTSGG
T ss_pred CCCcHHHhcCCCCCEEEecCCcC
Confidence 85 5 688999999999999964
No 285
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.38 E-value=8.4e-13 Score=121.89 Aligned_cols=101 Identities=15% Similarity=0.160 Sum_probs=90.4
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++..|..|+++++|++|+|++|+|++..|..|.++++|++|+|++|.+++..|..|..+++|+.|+|++|+|++
T Consensus 42 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 121 (251)
T 3m19_A 42 LQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKS 121 (251)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred ccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCC
Confidence 67899998888889999999999999999998777789999999999999999996666678999999999999999998
Q ss_pred CCCC-cccccccCcccccCCCC
Q 012213 81 EIPE-FGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 81 ~~p~-~~~~~~~~~~~~~~n~~ 101 (468)
.++. +..+.++..+++++|..
T Consensus 122 ~~~~~~~~l~~L~~L~Ls~N~l 143 (251)
T 3m19_A 122 LPSGVFDRLTKLKELRLNTNQL 143 (251)
T ss_dssp CCTTTTTTCTTCCEEECCSSCC
T ss_pred cChhHhccCCcccEEECcCCcC
Confidence 7775 67889999999999854
No 286
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.38 E-value=3.9e-13 Score=126.58 Aligned_cols=100 Identities=17% Similarity=0.172 Sum_probs=58.9
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|++++..|..+.++++|++|+|++|++++..+..+.++++|+.|+|++|.+++..+..|..+++|+.|++++|++++
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 191 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 191 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccc
Confidence 45666665555666666666666666666664334446666666666666666664333345666666666666666665
Q ss_pred CCC-CcccccccCcccccCCC
Q 012213 81 EIP-EFGQYSFFNSTSFTGNP 100 (468)
Q Consensus 81 ~~p-~~~~~~~~~~~~~~~n~ 100 (468)
.+| .+..+.++..+++++|.
T Consensus 192 ~~~~~~~~l~~L~~L~l~~n~ 212 (285)
T 1ozn_A 192 VHPHAFRDLGRLMTLYLFANN 212 (285)
T ss_dssp ECTTTTTTCTTCCEEECCSSC
T ss_pred cCHhHccCcccccEeeCCCCc
Confidence 544 35555555556655553
No 287
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.38 E-value=4.4e-13 Score=128.92 Aligned_cols=97 Identities=16% Similarity=0.208 Sum_probs=58.7
Q ss_pred CCCcccccCCccccc---------CCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCccccccccccccc
Q 012213 2 SRNNFSGIIPVEIGH---------CLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSAD 72 (468)
Q Consensus 2 ~~N~l~g~~p~~~~~---------l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ 72 (468)
++|++.|.+|..++. +++|++|+|++|+|+ .+|.+++++++|+.|+|++|.+++ +|+.+..+++|+.|+
T Consensus 158 ~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~ 235 (328)
T 4fcg_A 158 RACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELD 235 (328)
T ss_dssp EEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEE
T ss_pred CCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEE
Confidence 345555566655543 666666666666666 566666666666666666666663 555566666666666
Q ss_pred ccCcccCCCCCC-cccccccCcccccCCC
Q 012213 73 FSHNNFSGEIPE-FGQYSFFNSTSFTGNP 100 (468)
Q Consensus 73 ls~N~l~~~~p~-~~~~~~~~~~~~~~n~ 100 (468)
+++|++.+.+|. ++.+.++..+++++|.
T Consensus 236 Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~ 264 (328)
T 4fcg_A 236 LRGCTALRNYPPIFGGRAPLKRLILKDCS 264 (328)
T ss_dssp CTTCTTCCBCCCCTTCCCCCCEEECTTCT
T ss_pred CcCCcchhhhHHHhcCCCCCCEEECCCCC
Confidence 666666666553 5555666666666554
No 288
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.37 E-value=8.1e-13 Score=132.44 Aligned_cols=104 Identities=25% Similarity=0.331 Sum_probs=91.7
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|+ .+| .+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++
T Consensus 192 L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 269 (440)
T 3zyj_A 192 LAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTL 269 (440)
T ss_dssp CTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCC
T ss_pred CCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCc
Confidence 5778887 677 58888999999999999998778899999999999999999998778889999999999999999997
Q ss_pred CCCC-cccccccCcccccCCCCCCCCC
Q 012213 81 EIPE-FGQYSFFNSTSFTGNPHLCGSY 106 (468)
Q Consensus 81 ~~p~-~~~~~~~~~~~~~~n~~lcg~~ 106 (468)
.++. +..+.++..+++++|++.|.|.
T Consensus 270 ~~~~~~~~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 270 LPHDLFTPLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp CCTTTTSSCTTCCEEECCSSCEECSST
T ss_pred cChhHhccccCCCEEEcCCCCccCCCC
Confidence 7775 6788899999999999999874
No 289
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.36 E-value=2.3e-12 Score=119.67 Aligned_cols=144 Identities=15% Similarity=0.076 Sum_probs=110.3
Q ss_pred hhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCC-CCCccceeEEEecCCeeEEEE
Q 012213 181 LECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIR-HRNIVRLKAFCSNKETNLLVY 259 (468)
Q Consensus 181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 259 (468)
...|+....++.|+.+.||++... ++.+++|......... ...+.+|++.++.+. +..+.++++++...+..++||
T Consensus 13 l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~--~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~ 89 (263)
T 3tm0_A 13 IEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGT--TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM 89 (263)
T ss_dssp HTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTS--TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred hccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCC--HHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence 345666677888888999999764 6889999886432222 245889999998884 677888999998888899999
Q ss_pred eccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhc--------------------------------------
Q 012213 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHD-------------------------------------- 301 (468)
Q Consensus 260 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-------------------------------------- 301 (468)
||++|.+|.+.+.. ......++.++++++..||..
T Consensus 90 e~i~G~~l~~~~~~-------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (263)
T 3tm0_A 90 SEADGVLCSEEYED-------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDT 162 (263)
T ss_dssp ECCSSEEHHHHCCT-------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTC
T ss_pred EecCCeehhhccCC-------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccc
Confidence 99999999876421 122347788999999999981
Q ss_pred ------------------CCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q 012213 302 ------------------CSPLIIHRDVKSNNILLNSDFEAHVADFGLAKY 334 (468)
Q Consensus 302 ------------------~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 334 (468)
....++|+|++|.||+++++..+.|+||+.+..
T Consensus 163 ~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 163 PFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp SSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred cCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 114489999999999998765667999987753
No 290
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.36 E-value=1.3e-12 Score=115.49 Aligned_cols=98 Identities=21% Similarity=0.287 Sum_probs=88.3
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
+++|+|+ .+|..+. ++|+.|+|++|+|+ .+|..|.++++|+.|+|++|.|++..|..|.++++|+.|+|++|+|++
T Consensus 17 ~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~ 92 (193)
T 2wfh_A 17 CSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRC 92 (193)
T ss_dssp CTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCB
T ss_pred cCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCE
Confidence 4789998 8897764 68999999999999 899999999999999999999997666789999999999999999998
Q ss_pred CCCC-cccccccCcccccCCCCC
Q 012213 81 EIPE-FGQYSFFNSTSFTGNPHL 102 (468)
Q Consensus 81 ~~p~-~~~~~~~~~~~~~~n~~l 102 (468)
.+|. +..+.++..+++++|...
T Consensus 93 i~~~~f~~l~~L~~L~L~~N~l~ 115 (193)
T 2wfh_A 93 IPPRTFDGLKSLRLLSLHGNDIS 115 (193)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCC
T ss_pred eCHHHhCCCCCCCEEECCCCCCC
Confidence 8884 888999999999999643
No 291
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.36 E-value=6.1e-13 Score=138.88 Aligned_cols=106 Identities=24% Similarity=0.242 Sum_probs=62.1
Q ss_pred CCCCcccc-cCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccC
Q 012213 1 MSRNNFSG-IIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFS 79 (468)
Q Consensus 1 l~~N~l~g-~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~ 79 (468)
|++|++++ .+|..++++++|+.|+|++|++++..|..+.++++|+.|+|++|++++.+|..|..+++|+.|++++|+|+
T Consensus 455 l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 534 (606)
T 3vq2_A 455 MAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE 534 (606)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC
T ss_pred CCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc
Confidence 34555555 24555566666666666666666555555666666666666666666555666666666666666666666
Q ss_pred CCCCCccccc-ccCcccccCCCCCCCCC
Q 012213 80 GEIPEFGQYS-FFNSTSFTGNPHLCGSY 106 (468)
Q Consensus 80 ~~~p~~~~~~-~~~~~~~~~n~~lcg~~ 106 (468)
..++.+..+. ++..+++++|++.|.+.
T Consensus 535 ~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 535 TSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp CEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred ccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 3333444444 36666666666666553
No 292
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.36 E-value=1.6e-12 Score=116.36 Aligned_cols=104 Identities=19% Similarity=0.234 Sum_probs=53.6
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++..+..|.++++|++|+|++|+|++..+..+.++++|++|+|++|.+++..|..|..+++|+.|++++|++++
T Consensus 59 l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 138 (208)
T 2o6s_A 59 LGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKS 138 (208)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccce
Confidence 34555553333344555555555555555553333334555555555555555553333334555555555555555554
Q ss_pred CCCC-cccccccCcccccCCCCCCC
Q 012213 81 EIPE-FGQYSFFNSTSFTGNPHLCG 104 (468)
Q Consensus 81 ~~p~-~~~~~~~~~~~~~~n~~lcg 104 (468)
.++. +..+.++..+++++|++.|.
T Consensus 139 ~~~~~~~~l~~L~~L~l~~N~~~~~ 163 (208)
T 2o6s_A 139 VPDGVFDRLTSLQYIWLHDNPWDCT 163 (208)
T ss_dssp CCTTTTTTCTTCCEEECCSCCBCCC
T ss_pred eCHHHhccCCCccEEEecCCCeecC
Confidence 4443 44455555555555555443
No 293
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.35 E-value=8.7e-13 Score=125.51 Aligned_cols=101 Identities=20% Similarity=0.227 Sum_probs=82.1
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccc-cCCccccccccccEeeccCCcccccCCcccccccccccccccCcccC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSG-PIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFS 79 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g-~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~ 79 (468)
|++|++++..|..++++++|++|+|++|++++ .+|..+..+++|+.|+|++|.+++..|..|..+++|+.|++++|+++
T Consensus 133 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 212 (306)
T 2z66_A 133 ISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFF 212 (306)
T ss_dssp CTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCS
T ss_pred CCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccC
Confidence 56788887778888888888888888888886 57888888888888888888888766778888888888888888888
Q ss_pred CCCC-CcccccccCcccccCCCC
Q 012213 80 GEIP-EFGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 80 ~~~p-~~~~~~~~~~~~~~~n~~ 101 (468)
+..+ .+..+.++..+++++|..
T Consensus 213 ~~~~~~~~~l~~L~~L~L~~N~l 235 (306)
T 2z66_A 213 SLDTFPYKCLNSLQVLDYSLNHI 235 (306)
T ss_dssp BCCSGGGTTCTTCCEEECTTSCC
T ss_pred ccChhhccCcccCCEeECCCCCC
Confidence 7666 466777888888888754
No 294
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.35 E-value=4.8e-13 Score=143.72 Aligned_cols=102 Identities=17% Similarity=0.239 Sum_probs=82.9
Q ss_pred CCCCcccccCCcccccCCCCCEEEc-cCCccccc----------------------------------------------
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDL-SQNHLSGP---------------------------------------------- 33 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l-~~n~l~g~---------------------------------------------- 33 (468)
|++|+|+|.+|++|++|++|++||| ++|.++|.
T Consensus 330 Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~ 409 (876)
T 4ecn_A 330 LAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAIN 409 (876)
T ss_dssp CTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHH
T ss_pred CccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhh
Confidence 5788888888888888888888888 77766555
Q ss_pred ------------------------------CCccccccccccEeeccCCcccc-----------------cCCcccc--c
Q 012213 34 ------------------------------IPVQITQIHILNYLNVSWNQLNA-----------------SLPKEMG--N 64 (468)
Q Consensus 34 ------------------------------~p~~~~~l~~L~~l~ls~N~l~g-----------------~~p~~~~--~ 64 (468)
||.+|++|++|++|+|++|.|+| .+|+.++ +
T Consensus 410 ~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~ 489 (876)
T 4ecn_A 410 RNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSN 489 (876)
T ss_dssp TCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGG
T ss_pred hCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhcc
Confidence 78888888888888888888887 4888877 8
Q ss_pred ccccccccccCcccCCCCCC-cccccccCcccccCCCCC
Q 012213 65 MKSLTSADFSHNNFSGEIPE-FGQYSFFNSTSFTGNPHL 102 (468)
Q Consensus 65 l~~L~~l~ls~N~l~~~~p~-~~~~~~~~~~~~~~n~~l 102 (468)
+++|+.|+|++|++.|.+|. ++.+.++..+++++|..+
T Consensus 490 L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~l 528 (876)
T 4ecn_A 490 LKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGI 528 (876)
T ss_dssp CTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTS
T ss_pred CCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCc
Confidence 88888888888888888884 777888888888888633
No 295
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.35 E-value=7.3e-13 Score=127.36 Aligned_cols=100 Identities=15% Similarity=0.199 Sum_probs=92.1
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|+ .+|..++++++|++|+|++|+++ .+|..++++++|++|+|++|++.+.+|..++.+++|+.|++++|++.+
T Consensus 190 L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~ 267 (328)
T 4fcg_A 190 LEWTGIR-SLPASIANLQNLKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLL 267 (328)
T ss_dssp EEEECCC-CCCGGGGGCTTCCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCC
T ss_pred CcCCCcC-cchHhhcCCCCCCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchh
Confidence 4678998 89999999999999999999999 588899999999999999999999999999999999999999999999
Q ss_pred CCC-CcccccccCcccccCCCCC
Q 012213 81 EIP-EFGQYSFFNSTSFTGNPHL 102 (468)
Q Consensus 81 ~~p-~~~~~~~~~~~~~~~n~~l 102 (468)
.+| .+..+.++..+++++|+.+
T Consensus 268 ~~p~~~~~l~~L~~L~L~~n~~~ 290 (328)
T 4fcg_A 268 TLPLDIHRLTQLEKLDLRGCVNL 290 (328)
T ss_dssp BCCTTGGGCTTCCEEECTTCTTC
T ss_pred hcchhhhcCCCCCEEeCCCCCch
Confidence 999 4888999999999998654
No 296
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.35 E-value=1.3e-12 Score=131.45 Aligned_cols=104 Identities=21% Similarity=0.286 Sum_probs=91.6
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|+ .+| .+..+++|+.|+|++|+|++..|..|.++++|+.|+|++|.+++..|..|..+++|+.|+|++|+|++
T Consensus 203 L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 280 (452)
T 3zyi_A 203 LGMCNIK-DMP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSS 280 (452)
T ss_dssp CTTSCCS-SCC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCccc-ccc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCc
Confidence 5778888 455 58888999999999999998788899999999999999999998888889999999999999999997
Q ss_pred CCCC-cccccccCcccccCCCCCCCCC
Q 012213 81 EIPE-FGQYSFFNSTSFTGNPHLCGSY 106 (468)
Q Consensus 81 ~~p~-~~~~~~~~~~~~~~n~~lcg~~ 106 (468)
.++. +..+.++..+++++|++.|.|.
T Consensus 281 ~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 281 LPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp CCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred cChHHhccccCCCEEEccCCCcCCCCC
Confidence 7775 6778899999999999999874
No 297
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.34 E-value=1.3e-12 Score=112.97 Aligned_cols=85 Identities=24% Similarity=0.239 Sum_probs=75.3
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++..|..|+++++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|.++.
T Consensus 37 L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 37 LYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp CCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred cCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 68999998889999999999999999999996555567999999999999999996445569999999999999999998
Q ss_pred CCCCc
Q 012213 81 EIPEF 85 (468)
Q Consensus 81 ~~p~~ 85 (468)
..+.+
T Consensus 117 ~c~~l 121 (170)
T 3g39_A 117 ACSDI 121 (170)
T ss_dssp TBGGG
T ss_pred CchhH
Confidence 77653
No 298
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.33 E-value=1.3e-12 Score=138.71 Aligned_cols=98 Identities=31% Similarity=0.358 Sum_probs=84.3
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|+ .+|..+++|++|++|+|++|+|+ .||.+|++|++|++|||++|.|+ .||..|++|++|+.|+|++|.|+.
T Consensus 231 Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~ 307 (727)
T 4b8c_D 231 LSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVTT 307 (727)
T ss_dssp CTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCCC
T ss_pred CCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCCc
Confidence 6788888 88888888999999999999998 88988999999999999999998 789889999999999999998874
Q ss_pred CCCCcccccccCcccccCCCC
Q 012213 81 EIPEFGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 81 ~~p~~~~~~~~~~~~~~~n~~ 101 (468)
.++.++.+.+|..+++++|+.
T Consensus 308 lp~~~~~l~~L~~L~L~~N~l 328 (727)
T 4b8c_D 308 LPWEFGNLCNLQFLGVEGNPL 328 (727)
T ss_dssp CCSSTTSCTTCCCEECTTSCC
T ss_pred cChhhhcCCCccEEeCCCCcc
Confidence 444688888888888888864
No 299
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.33 E-value=1.9e-12 Score=134.11 Aligned_cols=106 Identities=18% Similarity=0.243 Sum_probs=80.5
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCccc-ccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLS-GPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFS 79 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~-g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~ 79 (468)
|++|++++.+|..++++++|+.|+|++|+++ +.+|..+..+++|+.|+|++|.+++..|..|..+++|+.|++++|+++
T Consensus 428 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 507 (570)
T 2z63_A 428 ISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLK 507 (570)
T ss_dssp CTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred CcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCC
Confidence 4667777777777777777888888888776 567777788888888888888888766777778888888888888888
Q ss_pred CCCCC-cccccccCcccccCCCCCCCCC
Q 012213 80 GEIPE-FGQYSFFNSTSFTGNPHLCGSY 106 (468)
Q Consensus 80 ~~~p~-~~~~~~~~~~~~~~n~~lcg~~ 106 (468)
+.+|. +..+.++..+++++|++.|.+.
T Consensus 508 ~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 508 SVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 77664 6677777778888887776643
No 300
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.33 E-value=2.6e-12 Score=120.07 Aligned_cols=99 Identities=20% Similarity=0.223 Sum_probs=77.3
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++ +| .++++++|++|+|++|++++..|..+.++++|++|+|++|.+++..|..|..+++|+.|++++|++++
T Consensus 70 l~~n~l~~-~~-~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 147 (272)
T 3rfs_A 70 LGGNKLHD-IS-ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQS 147 (272)
T ss_dssp CTTSCCCC-CG-GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCCCCCC-ch-hhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCc
Confidence 56788875 43 78888888888888888886556667888888888888888886555567888888888888888887
Q ss_pred CCCC-cccccccCcccccCCCC
Q 012213 81 EIPE-FGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 81 ~~p~-~~~~~~~~~~~~~~n~~ 101 (468)
.+|. +..+.++..+++++|..
T Consensus 148 ~~~~~~~~l~~L~~L~l~~n~l 169 (272)
T 3rfs_A 148 LPKGVFDKLTNLTELDLSYNQL 169 (272)
T ss_dssp CCTTTTTTCTTCCEEECCSSCC
T ss_pred cCHHHhccCccCCEEECCCCCc
Confidence 7665 57778888888888753
No 301
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.32 E-value=8.8e-13 Score=113.77 Aligned_cols=98 Identities=16% Similarity=0.190 Sum_probs=87.7
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCC--cccccccccccccccCccc
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLP--KEMGNMKSLTSADFSHNNF 78 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p--~~~~~l~~L~~l~ls~N~l 78 (468)
|++|+|++. ..++.+++|++|+|++|++++.+|..+.++++|++|+|++|.+++ +| ..+..+++|+.|++++|++
T Consensus 56 l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~l~~l~~L~~L~l~~N~l 132 (168)
T 2ell_A 56 LINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKD-ISTLEPLKKLECLKSLDLFNCEV 132 (168)
T ss_dssp EESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCS-SGGGGGGSSCSCCCEEECCSSGG
T ss_pred CcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCc-chhHHHHhcCCCCCEEEeeCCcC
Confidence 468999854 789999999999999999998799999999999999999999995 55 7899999999999999999
Q ss_pred CCCCC----CcccccccCcccccCCCC
Q 012213 79 SGEIP----EFGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 79 ~~~~p----~~~~~~~~~~~~~~~n~~ 101 (468)
++.++ .+..++++..+++++|..
T Consensus 133 ~~~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 133 TNLNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp GTSTTHHHHHHTTCSSCCEETTEETTS
T ss_pred cchHHHHHHHHHhCccCcEecCCCCCh
Confidence 98877 477888999999988854
No 302
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.32 E-value=1.2e-12 Score=113.55 Aligned_cols=84 Identities=25% Similarity=0.406 Sum_probs=74.1
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCc-cccccccccEeeccCCcccccCCc-ccccccccccccccCccc
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPV-QITQIHILNYLNVSWNQLNASLPK-EMGNMKSLTSADFSHNNF 78 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~-~~~~l~~L~~l~ls~N~l~g~~p~-~~~~l~~L~~l~ls~N~l 78 (468)
|++|+|++..|..|+++++|+.|+|++|+|++ +|. .|.++++|++|+|++|+|++ +|+ .|..+++|+.|+|++|.+
T Consensus 40 Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-i~~~~~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~L~~N~~ 117 (174)
T 2r9u_A 40 LNNNQITKLEPGVFDHLVNLQQLYFNSNKLTA-IPTGVFDKLTQLTQLDLNDNHLKS-IPRGAFDNLKSLTHIYLYNNPW 117 (174)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCSEEECCSSCB
T ss_pred eCCCCccccCHHHhcCCcCCCEEECCCCCCCc-cChhHhCCcchhhEEECCCCccce-eCHHHhccccCCCEEEeCCCCc
Confidence 68999998889999999999999999999995 555 57899999999999999995 555 599999999999999999
Q ss_pred CCCCCCcc
Q 012213 79 SGEIPEFG 86 (468)
Q Consensus 79 ~~~~p~~~ 86 (468)
+...+.+.
T Consensus 118 ~c~~~~~~ 125 (174)
T 2r9u_A 118 DCECRDIM 125 (174)
T ss_dssp CTTBGGGH
T ss_pred ccccccHH
Confidence 97666543
No 303
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.32 E-value=1.7e-12 Score=136.00 Aligned_cols=101 Identities=15% Similarity=0.061 Sum_probs=88.1
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++..|.+|.+|++|++|||++|+|++..|..|.+|++|++|+|++|+|++..|..|.++++|+.|+|++|+|++
T Consensus 59 Ls~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~ 138 (635)
T 4g8a_A 59 LSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLAS 138 (635)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCC
T ss_pred eeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCC
Confidence 68999996667789999999999999999996556689999999999999999996444568999999999999999998
Q ss_pred CCCC-cccccccCcccccCCCC
Q 012213 81 EIPE-FGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 81 ~~p~-~~~~~~~~~~~~~~n~~ 101 (468)
.++. ++.+.+++.+++++|..
T Consensus 139 l~~~~~~~L~~L~~L~Ls~N~l 160 (635)
T 4g8a_A 139 LENFPIGHLKTLKELNVAHNLI 160 (635)
T ss_dssp STTCCCTTCTTCCEEECCSSCC
T ss_pred CChhhhhcCcccCeeccccCcc
Confidence 7774 88889999999998864
No 304
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.32 E-value=1.3e-12 Score=115.95 Aligned_cols=97 Identities=13% Similarity=0.113 Sum_probs=70.6
Q ss_pred CCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCCC
Q 012213 2 SRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSGE 81 (468)
Q Consensus 2 ~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~ 81 (468)
++|+++ . +..++.+++|++|+|++|++++..|..++++++|++|+|++|.+++..|..+..+++|+.|++++|++.+.
T Consensus 74 ~~n~~~-~-~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~ 151 (197)
T 4ezg_A 74 NNIHAT-N-YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITD 151 (197)
T ss_dssp ESCCCS-C-CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCC
T ss_pred cCCCCC-c-chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccc
Confidence 456554 2 34677777888888888888776777777888888888888888776777777778888888888874445
Q ss_pred CCCcccccccCcccccCCC
Q 012213 82 IPEFGQYSFFNSTSFTGNP 100 (468)
Q Consensus 82 ~p~~~~~~~~~~~~~~~n~ 100 (468)
+|.+..++++..+++++|.
T Consensus 152 ~~~l~~l~~L~~L~l~~n~ 170 (197)
T 4ezg_A 152 IMPLKTLPELKSLNIQFDG 170 (197)
T ss_dssp CGGGGGCSSCCEEECTTBC
T ss_pred cHhhcCCCCCCEEECCCCC
Confidence 5666777777777777764
No 305
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.31 E-value=6.9e-13 Score=112.02 Aligned_cols=95 Identities=19% Similarity=0.170 Sum_probs=82.8
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCccccc-CCcccccccccccccccCcccC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNAS-LPKEMGNMKSLTSADFSHNNFS 79 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~-~p~~~~~l~~L~~l~ls~N~l~ 79 (468)
|++|+|++. ..++++++|++|+|++|++++.+|..+.++++|++|+|++|.+++. .|..+..+++|+.|++++|+++
T Consensus 49 l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~ 126 (149)
T 2je0_A 49 TINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVT 126 (149)
T ss_dssp CTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGG
T ss_pred CcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCccc
Confidence 678999955 7899999999999999999987999999999999999999999962 3488999999999999999999
Q ss_pred CCCC----CcccccccCccccc
Q 012213 80 GEIP----EFGQYSFFNSTSFT 97 (468)
Q Consensus 80 ~~~p----~~~~~~~~~~~~~~ 97 (468)
+.++ .+..++++..++++
T Consensus 127 ~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 127 NLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp GSTTHHHHHHHHCTTCCEETTB
T ss_pred chHHHHHHHHHHCCCcccccCC
Confidence 8776 36667777776654
No 306
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.31 E-value=3.4e-12 Score=120.43 Aligned_cols=98 Identities=22% Similarity=0.326 Sum_probs=75.6
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++ +|.. +.+++|++|+|++|+|+ .+|..+.++++|++|+|++|++++..|..|..+++|+.|+|++|+|++
T Consensus 62 L~~n~l~~-~~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ 138 (290)
T 1p9a_G 62 LDRAELTK-LQVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKT 138 (290)
T ss_dssp CTTSCCCE-EECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCC
T ss_pred CCCCccCc-ccCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCc
Confidence 56788874 4433 77888888888888888 788888888888888888888885445668888888888888888887
Q ss_pred CCCC-cccccccCcccccCCCC
Q 012213 81 EIPE-FGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 81 ~~p~-~~~~~~~~~~~~~~n~~ 101 (468)
.++. +..+.++..+++++|..
T Consensus 139 ~~~~~~~~l~~L~~L~L~~N~l 160 (290)
T 1p9a_G 139 LPPGLLTPTPKLEKLSLANNNL 160 (290)
T ss_dssp CCTTTTTTCTTCCEEECTTSCC
T ss_pred cChhhcccccCCCEEECCCCcC
Confidence 6664 56777888888887754
No 307
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.30 E-value=5.5e-13 Score=139.91 Aligned_cols=99 Identities=11% Similarity=0.098 Sum_probs=89.6
Q ss_pred CCcccccCCcccccCCCCCEEEccCCccccc-----------------CCcccc--ccccccEeeccCCcccccCCcccc
Q 012213 3 RNNFSGIIPVEIGHCLLLTYLDLSQNHLSGP-----------------IPVQIT--QIHILNYLNVSWNQLNASLPKEMG 63 (468)
Q Consensus 3 ~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~-----------------~p~~~~--~l~~L~~l~ls~N~l~g~~p~~~~ 63 (468)
+|+|+| ||..++++++|++|+|++|+|+|. +|.+++ ++++|++|+|++|.++|.+|+.|+
T Consensus 192 ~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~ 270 (636)
T 4eco_A 192 SNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLK 270 (636)
T ss_dssp SCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTT
T ss_pred cCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHh
Confidence 689998 999999999999999999999986 999999 999999999999999999999999
Q ss_pred cccccccccccCcc-cCC-CCCC-cccc------cccCcccccCCCCC
Q 012213 64 NMKSLTSADFSHNN-FSG-EIPE-FGQY------SFFNSTSFTGNPHL 102 (468)
Q Consensus 64 ~l~~L~~l~ls~N~-l~~-~~p~-~~~~------~~~~~~~~~~n~~l 102 (468)
++++|+.|++++|+ ++| .+|. ++.+ .+++.+++++|...
T Consensus 271 ~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~ 318 (636)
T 4eco_A 271 ALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK 318 (636)
T ss_dssp TCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS
T ss_pred cCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC
Confidence 99999999999998 998 7774 6655 78889999888643
No 308
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.29 E-value=3.5e-12 Score=124.29 Aligned_cols=102 Identities=21% Similarity=0.145 Sum_probs=86.8
Q ss_pred CCCCcccccCCcccc-cCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccC
Q 012213 1 MSRNNFSGIIPVEIG-HCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFS 79 (468)
Q Consensus 1 l~~N~l~g~~p~~~~-~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~ 79 (468)
|++|+|++..+..+. ++++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|+
T Consensus 46 Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~ 125 (361)
T 2xot_A 46 LSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIV 125 (361)
T ss_dssp CCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCccc
Confidence 688999976666776 8999999999999999666678999999999999999999655567899999999999999999
Q ss_pred CCCC-CcccccccCcccccCCCCC
Q 012213 80 GEIP-EFGQYSFFNSTSFTGNPHL 102 (468)
Q Consensus 80 ~~~p-~~~~~~~~~~~~~~~n~~l 102 (468)
+..| .+..+.++..+++++|...
T Consensus 126 ~~~~~~~~~l~~L~~L~L~~N~l~ 149 (361)
T 2xot_A 126 VVDRNAFEDMAQLQKLYLSQNQIS 149 (361)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCC
T ss_pred EECHHHhCCcccCCEEECCCCcCC
Confidence 8766 4788889999999988643
No 309
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.28 E-value=3.9e-12 Score=123.96 Aligned_cols=97 Identities=22% Similarity=0.196 Sum_probs=63.3
Q ss_pred CCCcccccCCcccccCCCCCEEEccCCcccccCCcccc-ccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 2 SRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQIT-QIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 2 ~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~-~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
++|+|+ .+|..+. ..|+.|+|++|+|++..+..+. ++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++
T Consensus 26 ~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~ 102 (361)
T 2xot_A 26 SKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHT 102 (361)
T ss_dssp CSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred CCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCc
Confidence 566666 5666553 3467777777777754444555 67777777777777775444557777777777777777776
Q ss_pred CCCC-cccccccCcccccCCCC
Q 012213 81 EIPE-FGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 81 ~~p~-~~~~~~~~~~~~~~n~~ 101 (468)
.++. +..+.++..+++++|..
T Consensus 103 ~~~~~~~~l~~L~~L~L~~N~i 124 (361)
T 2xot_A 103 LDEFLFSDLQALEVLLLYNNHI 124 (361)
T ss_dssp ECTTTTTTCTTCCEEECCSSCC
T ss_pred CCHHHhCCCcCCCEEECCCCcc
Confidence 5553 56666777777776643
No 310
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.27 E-value=4.2e-12 Score=130.80 Aligned_cols=83 Identities=19% Similarity=0.206 Sum_probs=77.8
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccC-CcccccccccccccccCcccC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASL-PKEMGNMKSLTSADFSHNNFS 79 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~-p~~~~~l~~L~~l~ls~N~l~ 79 (468)
|++|+|+ .+|..|++|++|+.|+|++|+|++ +| .+++|++|+.|+|++|+|++.. |..|+.+++|+.|+|++|+|+
T Consensus 470 Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~ 546 (567)
T 1dce_A 470 LSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLC 546 (567)
T ss_dssp CCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred cCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCC
Confidence 6899999 999999999999999999999995 88 9999999999999999999765 999999999999999999999
Q ss_pred CCCCCcc
Q 012213 80 GEIPEFG 86 (468)
Q Consensus 80 ~~~p~~~ 86 (468)
+.+|...
T Consensus 547 ~~~~~~~ 553 (567)
T 1dce_A 547 QEEGIQE 553 (567)
T ss_dssp GSSSCTT
T ss_pred CCccHHH
Confidence 9888643
No 311
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.27 E-value=6.5e-12 Score=117.54 Aligned_cols=105 Identities=17% Similarity=0.294 Sum_probs=64.1
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccc-cCCccccccccccEeeccCCcccccCCcccccc--------------
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSG-PIPVQITQIHILNYLNVSWNQLNASLPKEMGNM-------------- 65 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g-~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l-------------- 65 (468)
|++|++++..+..++++++|++|+|++|++++ .+|..+.++++|+.|+|++|.+++..|..+..+
T Consensus 107 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~ 186 (276)
T 2z62_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (276)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCS
T ss_pred CCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCC
Confidence 35566664444456666666666666666664 256666666666666666666664333333333
Q ss_pred -------------cccccccccCcccCCCCCC-cccccccCcccccCCCCCCCC
Q 012213 66 -------------KSLTSADFSHNNFSGEIPE-FGQYSFFNSTSFTGNPHLCGS 105 (468)
Q Consensus 66 -------------~~L~~l~ls~N~l~~~~p~-~~~~~~~~~~~~~~n~~lcg~ 105 (468)
.+|+.|++++|++++.++. +..+.++..+++++|++.|.+
T Consensus 187 n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 240 (276)
T 2z62_A 187 NPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 240 (276)
T ss_dssp SCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCT
T ss_pred CcccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccC
Confidence 3566667777777655554 456667777777777777664
No 312
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.26 E-value=6.2e-12 Score=130.08 Aligned_cols=89 Identities=19% Similarity=0.317 Sum_probs=51.7
Q ss_pred cccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCCCCCC-cccccccC
Q 012213 14 IGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSGEIPE-FGQYSFFN 92 (468)
Q Consensus 14 ~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~-~~~~~~~~ 92 (468)
+..+++|+.|+|++|++++.+|..+. ++|+.|+|++|+++ .+|+.+..+++|+.|+|++|+|++.++. +..+..+.
T Consensus 424 ~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~ 500 (562)
T 3a79_B 424 CAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQ 500 (562)
T ss_dssp CCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCC
T ss_pred hcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCC
Confidence 33344444444444444443333332 46666666666666 5666666667777777777777744444 56666666
Q ss_pred cccccCCCCCCCC
Q 012213 93 STSFTGNPHLCGS 105 (468)
Q Consensus 93 ~~~~~~n~~lcg~ 105 (468)
.+++++|++.|.|
T Consensus 501 ~L~l~~N~~~c~c 513 (562)
T 3a79_B 501 YIWLHDNPWDCTC 513 (562)
T ss_dssp CEECCSCCBCCCH
T ss_pred EEEecCCCcCCCc
Confidence 7777777766654
No 313
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.26 E-value=2e-12 Score=140.11 Aligned_cols=101 Identities=19% Similarity=0.212 Sum_probs=80.4
Q ss_pred CCCccc-----ccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCc
Q 012213 2 SRNNFS-----GIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHN 76 (468)
Q Consensus 2 ~~N~l~-----g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N 76 (468)
++|+|+ +..|..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..|..+. ++|+.|+|++|
T Consensus 459 s~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N 536 (844)
T 3j0a_A 459 GENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRN 536 (844)
T ss_dssp ESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEE
T ss_pred CCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCC
Confidence 456665 33445678888999999999999977777889999999999999999864444443 78999999999
Q ss_pred ccCCCCCCcccccccCcccccCCCCCCCCC
Q 012213 77 NFSGEIPEFGQYSFFNSTSFTGNPHLCGSY 106 (468)
Q Consensus 77 ~l~~~~p~~~~~~~~~~~~~~~n~~lcg~~ 106 (468)
+|++.+|.. +.++..+++++|++.|.|.
T Consensus 537 ~l~~~~~~~--~~~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 537 QLLAPNPDV--FVSLSVLDITHNKFICECE 564 (844)
T ss_dssp CCCCCCSCC--CSSCCEEEEEEECCCCSSS
T ss_pred cCCCCChhH--hCCcCEEEecCCCcccccc
Confidence 999988853 4578889999999999775
No 314
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.25 E-value=5.6e-12 Score=126.79 Aligned_cols=102 Identities=20% Similarity=0.155 Sum_probs=93.6
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|++++.+|..++++++|+.|+|++|++++..|..|.++++|++|+|++|.+++..|..|..+++|+.|+|++|++++
T Consensus 282 l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 361 (455)
T 3v47_A 282 LSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRA 361 (455)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCE
T ss_pred ecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccc
Confidence 57899998899999999999999999999998888899999999999999999998778889999999999999999998
Q ss_pred CCC-CcccccccCcccccCCCCC
Q 012213 81 EIP-EFGQYSFFNSTSFTGNPHL 102 (468)
Q Consensus 81 ~~p-~~~~~~~~~~~~~~~n~~l 102 (468)
.+| .+..+.++..+++++|...
T Consensus 362 ~~~~~~~~l~~L~~L~L~~N~l~ 384 (455)
T 3v47_A 362 LGDQSFLGLPNLKELALDTNQLK 384 (455)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCS
T ss_pred cChhhccccccccEEECCCCccc
Confidence 877 4888999999999998643
No 315
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.25 E-value=3.9e-12 Score=132.79 Aligned_cols=93 Identities=22% Similarity=0.246 Sum_probs=54.5
Q ss_pred cccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCCCCCC-cccccc
Q 012213 12 VEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSGEIPE-FGQYSF 90 (468)
Q Consensus 12 ~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~-~~~~~~ 90 (468)
..++.+++|+.|+|++|++++..|..|+++++|+.|+|++|++++..|..+..+++| .|++++|++++.+|. +..+..
T Consensus 470 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~ 548 (606)
T 3t6q_A 470 NSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQ 548 (606)
T ss_dssp CGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHT
T ss_pred hhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCC
Confidence 345555555555555555555455555566666666666666665555556666666 666666666655553 455556
Q ss_pred cCcccccCCCCCCCC
Q 012213 91 FNSTSFTGNPHLCGS 105 (468)
Q Consensus 91 ~~~~~~~~n~~lcg~ 105 (468)
+..+++++|++.|.|
T Consensus 549 L~~L~l~~N~~~c~c 563 (606)
T 3t6q_A 549 QRTINLRQNPLDCTC 563 (606)
T ss_dssp SSEEECTTCCEECSG
T ss_pred CCEEeCCCCCccccC
Confidence 666666777666654
No 316
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.25 E-value=3.6e-12 Score=113.04 Aligned_cols=96 Identities=18% Similarity=0.190 Sum_probs=84.3
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|+ .+| .+..+++|++|+|++|+++ . +..+.++++|++|+|++|.+++..|..++.+++|+.|++++|++++
T Consensus 51 l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~-~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~ 126 (197)
T 4ezg_A 51 LANINVT-DLT-GIEYAHNIKDLTINNIHAT-N-YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDD 126 (197)
T ss_dssp EESSCCS-CCT-TGGGCTTCSEEEEESCCCS-C-CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBG
T ss_pred ccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-c-chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCc
Confidence 4678888 788 7999999999999999776 3 4589999999999999999998889999999999999999999998
Q ss_pred CCC-CcccccccCcccccCCC
Q 012213 81 EIP-EFGQYSFFNSTSFTGNP 100 (468)
Q Consensus 81 ~~p-~~~~~~~~~~~~~~~n~ 100 (468)
..| .+..+.++..+++++|.
T Consensus 127 ~~~~~l~~l~~L~~L~L~~n~ 147 (197)
T 4ezg_A 127 SILTKINTLPKVNSIDLSYNG 147 (197)
T ss_dssp GGHHHHTTCSSCCEEECCSCT
T ss_pred HhHHHHhhCCCCCEEEccCCC
Confidence 666 47888899999999886
No 317
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.25 E-value=1.5e-11 Score=107.04 Aligned_cols=98 Identities=17% Similarity=0.191 Sum_probs=83.9
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
+++|+++ .+|..+. ++|+.|+|++|++++..|..+.++++|++|+|++|.+++..|..|..+++|+.|++++|+|++
T Consensus 14 ~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 90 (177)
T 2o6r_A 14 CNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQS 90 (177)
T ss_dssp CCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred ecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccc
Confidence 4678898 7886554 799999999999996555668999999999999999996445567999999999999999998
Q ss_pred CCCC-cccccccCcccccCCCC
Q 012213 81 EIPE-FGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 81 ~~p~-~~~~~~~~~~~~~~n~~ 101 (468)
.++. +..+.++..+++++|..
T Consensus 91 ~~~~~~~~l~~L~~L~l~~N~l 112 (177)
T 2o6r_A 91 LPNGVFDKLTQLKELALDTNQL 112 (177)
T ss_dssp CCTTTTTTCTTCCEEECCSSCC
T ss_pred cCHHHhhCCcccCEEECcCCcc
Confidence 8875 68889999999999854
No 318
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.25 E-value=7.8e-12 Score=118.86 Aligned_cols=101 Identities=20% Similarity=0.254 Sum_probs=87.4
Q ss_pred CCCCcccccCC-cccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccc-cCCcccccccccccccccCccc
Q 012213 1 MSRNNFSGIIP-VEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNA-SLPKEMGNMKSLTSADFSHNNF 78 (468)
Q Consensus 1 l~~N~l~g~~p-~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g-~~p~~~~~l~~L~~l~ls~N~l 78 (468)
|++|++++..+ ..+.++++|++|+|++|++++..|..+.++++|+.|+|++|.+++ .+|..+..+++|+.|++++|++
T Consensus 108 l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l 187 (306)
T 2z66_A 108 FQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQL 187 (306)
T ss_dssp CTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCC
T ss_pred CCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCc
Confidence 57889985544 578899999999999999998888889999999999999999986 5788899999999999999999
Q ss_pred CCCCC-CcccccccCcccccCCCC
Q 012213 79 SGEIP-EFGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 79 ~~~~p-~~~~~~~~~~~~~~~n~~ 101 (468)
++.+| .+..+.++..+++++|..
T Consensus 188 ~~~~~~~~~~l~~L~~L~L~~N~l 211 (306)
T 2z66_A 188 EQLSPTAFNSLSSLQVLNMSHNNF 211 (306)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCC
T ss_pred CCcCHHHhcCCCCCCEEECCCCcc
Confidence 98877 477888899999998864
No 319
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.24 E-value=1.2e-11 Score=115.62 Aligned_cols=101 Identities=15% Similarity=0.072 Sum_probs=77.8
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++..+..|+++++|++|+|++|++++..|..+.++++|++|+|++|.+++..|..|..+++|+.|++++|++++
T Consensus 35 ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 114 (276)
T 2z62_A 35 LSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLAS 114 (276)
T ss_dssp CTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCC
T ss_pred CCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccc
Confidence 56788886556678888888888888888885555678888888888888888886666778888888888888888887
Q ss_pred CCC-CcccccccCcccccCCCC
Q 012213 81 EIP-EFGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 81 ~~p-~~~~~~~~~~~~~~~n~~ 101 (468)
..+ .++.+.++..+++++|..
T Consensus 115 ~~~~~~~~l~~L~~L~l~~n~l 136 (276)
T 2z62_A 115 LENFPIGHLKTLKELNVAHNLI 136 (276)
T ss_dssp STTCCCTTCTTCCEEECCSSCC
T ss_pred cCchhcccCCCCCEEECcCCcc
Confidence 666 477777788888877743
No 320
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.24 E-value=9.1e-12 Score=127.51 Aligned_cols=101 Identities=20% Similarity=0.252 Sum_probs=50.9
Q ss_pred CCCcccccCCcc-cccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 2 SRNNFSGIIPVE-IGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 2 ~~N~l~g~~p~~-~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
++|+|++.+|.. +..+++|+.|+|++|++++.+|..+. ++|+.|||++|+++ .+|..+..+++|+.|++++|+|++
T Consensus 382 s~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~ 458 (520)
T 2z7x_B 382 SQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS 458 (520)
T ss_dssp CSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC
T ss_pred CCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc
Confidence 344444333332 33444444444444444444443332 45555555555555 455555566666666666666664
Q ss_pred CCCC-cccccccCcccccCCCCCCCC
Q 012213 81 EIPE-FGQYSFFNSTSFTGNPHLCGS 105 (468)
Q Consensus 81 ~~p~-~~~~~~~~~~~~~~n~~lcg~ 105 (468)
.++. +..+.++..+++++|++.|.|
T Consensus 459 l~~~~~~~l~~L~~L~l~~N~~~c~c 484 (520)
T 2z7x_B 459 VPDGIFDRLTSLQKIWLHTNPWDCSC 484 (520)
T ss_dssp CCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred cCHHHhccCCcccEEECcCCCCcccC
Confidence 3333 455555666666666655543
No 321
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.24 E-value=4.7e-12 Score=128.23 Aligned_cols=105 Identities=19% Similarity=0.298 Sum_probs=93.3
Q ss_pred CCCCcccccCC-cccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccC
Q 012213 1 MSRNNFSGIIP-VEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFS 79 (468)
Q Consensus 1 l~~N~l~g~~p-~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~ 79 (468)
|++|+|+ .+| ..+.++++|+.|+|++|++++..+..|.++++|+.|+|++|++++..|..|..+++|+.|+|++|+|+
T Consensus 231 l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 309 (477)
T 2id5_A 231 ITHCNLT-AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLT 309 (477)
T ss_dssp EESSCCC-SCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCS
T ss_pred CcCCccc-ccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCc
Confidence 4578888 455 67899999999999999999777778999999999999999999888999999999999999999999
Q ss_pred CCCCC-cccccccCcccccCCCCCCCCC
Q 012213 80 GEIPE-FGQYSFFNSTSFTGNPHLCGSY 106 (468)
Q Consensus 80 ~~~p~-~~~~~~~~~~~~~~n~~lcg~~ 106 (468)
+.++. +..+.++..+++++|++.|.|.
T Consensus 310 ~~~~~~~~~l~~L~~L~l~~N~l~c~c~ 337 (477)
T 2id5_A 310 TLEESVFHSVGNLETLILDSNPLACDCR 337 (477)
T ss_dssp CCCGGGBSCGGGCCEEECCSSCEECSGG
T ss_pred eeCHhHcCCCcccCEEEccCCCccCccc
Confidence 87774 6788899999999999998864
No 322
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.24 E-value=1.7e-11 Score=114.39 Aligned_cols=101 Identities=17% Similarity=0.149 Sum_probs=83.0
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|+...+..|.++++|++|+|++|++++..+..+.++++|++|+|++|.+++..|..|..+++|+.|++++|++++
T Consensus 68 l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 147 (270)
T 2o6q_A 68 LNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQS 147 (270)
T ss_dssp CCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCc
Confidence 57889984444456889999999999999995555567899999999999999997666678899999999999999997
Q ss_pred CCCC-cccccccCcccccCCCC
Q 012213 81 EIPE-FGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 81 ~~p~-~~~~~~~~~~~~~~n~~ 101 (468)
.++. +..+.++..+++++|..
T Consensus 148 ~~~~~~~~l~~L~~L~L~~n~l 169 (270)
T 2o6q_A 148 LPKGVFDKLTSLKELRLYNNQL 169 (270)
T ss_dssp CCTTTTTTCTTCCEEECCSSCC
T ss_pred cCHhHccCCcccceeEecCCcC
Confidence 7665 77888899999988854
No 323
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.23 E-value=5e-12 Score=109.95 Aligned_cols=97 Identities=15% Similarity=0.208 Sum_probs=80.5
Q ss_pred CCCCcccccCCcccccCC-CCCEEEccCCcccccCCccccccccccEeeccCCcccccCCccc-ccccccccccccCccc
Q 012213 1 MSRNNFSGIIPVEIGHCL-LLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEM-GNMKSLTSADFSHNNF 78 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~-~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~-~~l~~L~~l~ls~N~l 78 (468)
|++|+|+ .+|. +..+. +|++|+|++|+|++ + ..+.++++|++|+|++|.+++ +|+.+ ..+++|+.|++++|++
T Consensus 26 l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~-~-~~l~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L~~N~i 100 (176)
T 1a9n_A 26 LRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRK-L-DGFPLLRRLKTLLVNNNRICR-IGEGLDQALPDLTELILTNNSL 100 (176)
T ss_dssp CTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCE-E-CCCCCCSSCCEEECCSSCCCE-ECSCHHHHCTTCCEEECCSCCC
T ss_pred eeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCc-c-cccccCCCCCEEECCCCcccc-cCcchhhcCCCCCEEECCCCcC
Confidence 6789998 6664 66655 99999999999995 4 689999999999999999995 66554 8999999999999999
Q ss_pred CCCCC--CcccccccCcccccCCCCC
Q 012213 79 SGEIP--EFGQYSFFNSTSFTGNPHL 102 (468)
Q Consensus 79 ~~~~p--~~~~~~~~~~~~~~~n~~l 102 (468)
+..++ .+..+.++..+++++|+..
T Consensus 101 ~~~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 101 VELGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp CCGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred CcchhhHhhhcCCCCCEEEecCCCCC
Confidence 75443 4777888999999999754
No 324
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.23 E-value=1.6e-11 Score=115.36 Aligned_cols=101 Identities=20% Similarity=0.212 Sum_probs=87.5
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCc-ccccCCcccccccccccccccCcccC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQ-LNASLPKEMGNMKSLTSADFSHNNFS 79 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~-l~g~~p~~~~~l~~L~~l~ls~N~l~ 79 (468)
|++|+|++..|..|+++++|++|+|++|++++..|..|.++++|++|+|++|. ++...|..|..+++|+.|++++|+++
T Consensus 39 l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~ 118 (285)
T 1ozn_A 39 LHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQ 118 (285)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCC
T ss_pred eeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCC
Confidence 57899997666789999999999999999997778899999999999999997 77544778999999999999999999
Q ss_pred CCCCC-cccccccCcccccCCCC
Q 012213 80 GEIPE-FGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 80 ~~~p~-~~~~~~~~~~~~~~n~~ 101 (468)
+.+|. +..+.++..+++++|..
T Consensus 119 ~~~~~~~~~l~~L~~L~l~~n~l 141 (285)
T 1ozn_A 119 ELGPGLFRGLAALQYLYLQDNAL 141 (285)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCC
T ss_pred EECHhHhhCCcCCCEEECCCCcc
Confidence 88774 77888899999998854
No 325
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.22 E-value=3.2e-11 Score=111.66 Aligned_cols=129 Identities=17% Similarity=0.094 Sum_probs=96.9
Q ss_pred cccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCC--ccceeEEEecCCeeEEEEeccCCCChh
Q 012213 191 GRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRN--IVRLKAFCSNKETNLLVYEYMPNGSLG 268 (468)
Q Consensus 191 g~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~~~~gsL~ 268 (468)
+.|..+.||++...+|+.+++|..... ....+..|+..++.+.+.+ +.+++++....+..++||||++|.+|.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~-----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~ 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG-----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC-----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc-----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC
Confidence 355669999998877888999986532 1145788999888885444 556888888877889999999998884
Q ss_pred hhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcC----------------------------------------------
Q 012213 269 EVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDC---------------------------------------------- 302 (468)
Q Consensus 269 ~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~---------------------------------------------- 302 (468)
... .+ ...++.++++.+..||...
T Consensus 104 --~~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (264)
T 1nd4_A 104 --SSH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFAR 173 (264)
T ss_dssp --TSC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHH
T ss_pred --cCc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHH
Confidence 221 11 2356778888888888642
Q ss_pred ---------CCCeeecCCCCCcEEEcCCCceEEeecccccc
Q 012213 303 ---------SPLIIHRDVKSNNILLNSDFEAHVADFGLAKY 334 (468)
Q Consensus 303 ---------~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 334 (468)
...++|+|++|.||+++++..+.|+||+.+..
T Consensus 174 l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 174 LKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 12399999999999998876677999998753
No 326
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.22 E-value=2.3e-12 Score=123.02 Aligned_cols=99 Identities=16% Similarity=0.165 Sum_probs=79.5
Q ss_pred CCCCcc-cccCCcccc-------cCCCCCEEEccCCcccccCCccc--cccccccEeeccCCcccccCCcccccc-----
Q 012213 1 MSRNNF-SGIIPVEIG-------HCLLLTYLDLSQNHLSGPIPVQI--TQIHILNYLNVSWNQLNASLPKEMGNM----- 65 (468)
Q Consensus 1 l~~N~l-~g~~p~~~~-------~l~~L~~L~l~~n~l~g~~p~~~--~~l~~L~~l~ls~N~l~g~~p~~~~~l----- 65 (468)
|++|+| ++.+|..+. ++++|++|+|++|+++|.+|..+ .++++|++|+|++|.+++. |+.+..+
T Consensus 70 L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~ 148 (312)
T 1wwl_A 70 LKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLK 148 (312)
T ss_dssp CCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCC
T ss_pred cccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhc
Confidence 467777 456777666 78888888888888888888876 8888888888888888864 7777777
Q ss_pred cccccccccCcccCCCCC-CcccccccCcccccCCC
Q 012213 66 KSLTSADFSHNNFSGEIP-EFGQYSFFNSTSFTGNP 100 (468)
Q Consensus 66 ~~L~~l~ls~N~l~~~~p-~~~~~~~~~~~~~~~n~ 100 (468)
++|+.|++++|++++.+| .++.+.++..+++++|.
T Consensus 149 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 184 (312)
T 1wwl_A 149 PGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNP 184 (312)
T ss_dssp TTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCT
T ss_pred CCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCC
Confidence 788888888888887776 47788888888888886
No 327
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.22 E-value=2.9e-12 Score=137.71 Aligned_cols=93 Identities=17% Similarity=0.167 Sum_probs=81.1
Q ss_pred cCCcccc--cCCCCCEEEccCCcccccCCccccccccccEeeccCCc-ccc-cCCccccccc-------ccccccccCcc
Q 012213 9 IIPVEIG--HCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQ-LNA-SLPKEMGNMK-------SLTSADFSHNN 77 (468)
Q Consensus 9 ~~p~~~~--~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~-l~g-~~p~~~~~l~-------~L~~l~ls~N~ 77 (468)
.+|.+++ +|++|++|+|++|++.|.+|.+|++|++|+.|+|++|+ ++| .+|..++.++ +|+.|+|++|+
T Consensus 480 ~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~ 559 (876)
T 4ecn_A 480 YENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNN 559 (876)
T ss_dssp HTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSC
T ss_pred cCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCc
Confidence 4999988 99999999999999999999999999999999999998 998 8998777776 89999999999
Q ss_pred cCCCCCC---cccccccCcccccCCCCC
Q 012213 78 FSGEIPE---FGQYSFFNSTSFTGNPHL 102 (468)
Q Consensus 78 l~~~~p~---~~~~~~~~~~~~~~n~~l 102 (468)
|+ .+|. ++.+.++..+++++|...
T Consensus 560 L~-~ip~~~~l~~L~~L~~L~Ls~N~l~ 586 (876)
T 4ecn_A 560 LE-EFPASASLQKMVKLGLLDCVHNKVR 586 (876)
T ss_dssp CC-BCCCHHHHTTCTTCCEEECTTSCCC
T ss_pred CC-ccCChhhhhcCCCCCEEECCCCCcc
Confidence 99 6665 788888888888888643
No 328
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.22 E-value=1e-11 Score=107.98 Aligned_cols=86 Identities=13% Similarity=0.099 Sum_probs=71.7
Q ss_pred cccccCCCCCEEEccCCcccccCCccccccc-cccEeeccCCcccccCCcccccccccccccccCcccCCCCCCc-cccc
Q 012213 12 VEIGHCLLLTYLDLSQNHLSGPIPVQITQIH-ILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSGEIPEF-GQYS 89 (468)
Q Consensus 12 ~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~-~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~-~~~~ 89 (468)
..+.++.+|+.|+|++|+++ .+|. +..+. +|++|+|++|.+++ + +.|..+++|+.|++++|++++.+|.+ ..+.
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~-~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRK-L-DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp CEEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCE-E-CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred HhcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCc-c-cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 35678889999999999999 6764 66665 99999999999995 5 68899999999999999999766664 7888
Q ss_pred ccCcccccCCCC
Q 012213 90 FFNSTSFTGNPH 101 (468)
Q Consensus 90 ~~~~~~~~~n~~ 101 (468)
++..+++++|..
T Consensus 89 ~L~~L~L~~N~i 100 (176)
T 1a9n_A 89 DLTELILTNNSL 100 (176)
T ss_dssp TCCEEECCSCCC
T ss_pred CCCEEECCCCcC
Confidence 899999998864
No 329
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.21 E-value=1.7e-11 Score=128.01 Aligned_cols=101 Identities=17% Similarity=0.149 Sum_probs=75.7
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++..|..|+++++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|+++++|+.|++++|++++
T Consensus 39 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 118 (606)
T 3vq2_A 39 LSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLAS 118 (606)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCC
T ss_pred CCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCcccc
Confidence 56777776666677788888888888888886667777788888888888888876667777778888888888887776
Q ss_pred CCC-CcccccccCcccccCCCC
Q 012213 81 EIP-EFGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 81 ~~p-~~~~~~~~~~~~~~~n~~ 101 (468)
.+| .++.+.+++.+++++|..
T Consensus 119 ~~~~~~~~l~~L~~L~L~~n~l 140 (606)
T 3vq2_A 119 LESFPIGQLITLKKLNVAHNFI 140 (606)
T ss_dssp SSSSCCTTCTTCCEEECCSSCC
T ss_pred ccccccCCCCCCCEEeCCCCcc
Confidence 664 466777777777777653
No 330
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.21 E-value=2.6e-11 Score=116.50 Aligned_cols=98 Identities=17% Similarity=0.235 Sum_probs=57.3
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+++ .+|..+. ++|+.|+|++|++++..|..+.++++|+.|+|++|.+++..|..+..+++|+.|++++|+++.
T Consensus 178 l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 254 (330)
T 1xku_A 178 IADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVK 254 (330)
T ss_dssp CCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSS
T ss_pred CCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCcc
Confidence 3456665 4554443 566666666666665555666666666666666666665444456666666666666666663
Q ss_pred CCCCcccccccCcccccCCCC
Q 012213 81 EIPEFGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 81 ~~p~~~~~~~~~~~~~~~n~~ 101 (468)
.+..+..+..+..+++++|+.
T Consensus 255 lp~~l~~l~~L~~L~l~~N~i 275 (330)
T 1xku_A 255 VPGGLADHKYIQVVYLHNNNI 275 (330)
T ss_dssp CCTTTTTCSSCCEEECCSSCC
T ss_pred CChhhccCCCcCEEECCCCcC
Confidence 333455555666666666543
No 331
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.20 E-value=1.5e-11 Score=128.41 Aligned_cols=102 Identities=19% Similarity=0.105 Sum_probs=87.2
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++..|..|+++++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|+++++|+.|++++|++++
T Consensus 40 Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~ 119 (606)
T 3t6q_A 40 FSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISS 119 (606)
T ss_dssp CTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSC
T ss_pred ccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCccc
Confidence 67899997778899999999999999999997778889999999999999999998778889999999999999999987
Q ss_pred CCC-CcccccccCcccccCCCCC
Q 012213 81 EIP-EFGQYSFFNSTSFTGNPHL 102 (468)
Q Consensus 81 ~~p-~~~~~~~~~~~~~~~n~~l 102 (468)
..| .+..+.++..+++++|...
T Consensus 120 l~~~~~~~l~~L~~L~L~~n~l~ 142 (606)
T 3t6q_A 120 IDFIPLHNQKTLESLYLGSNHIS 142 (606)
T ss_dssp GGGSCCTTCTTCCEEECCSSCCC
T ss_pred CCcchhccCCcccEEECCCCccc
Confidence 644 4777888888888887543
No 332
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.20 E-value=1.2e-11 Score=127.44 Aligned_cols=100 Identities=17% Similarity=0.158 Sum_probs=80.7
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++..|..|+++++|++|+|++|++++..|..|+++++|++|||++|.+++..|..|+++++|+.|++++|++++
T Consensus 33 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 112 (549)
T 2z81_A 33 LSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQT 112 (549)
T ss_dssp CCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSS
T ss_pred CcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccc
Confidence 57888887777888888888888888888887777788888888888888888886555568888888888888888885
Q ss_pred C-C-CCcccccccCcccccCCC
Q 012213 81 E-I-PEFGQYSFFNSTSFTGNP 100 (468)
Q Consensus 81 ~-~-p~~~~~~~~~~~~~~~n~ 100 (468)
. + +.++.+.+++.+++++|.
T Consensus 113 ~~~~~~~~~l~~L~~L~L~~n~ 134 (549)
T 2z81_A 113 LGVTSLFPNLTNLQTLRIGNVE 134 (549)
T ss_dssp SCSSCSCTTCTTCCEEEEEESS
T ss_pred cchhhhhhccCCccEEECCCCc
Confidence 2 3 357778888888888775
No 333
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.20 E-value=2.2e-11 Score=126.86 Aligned_cols=97 Identities=19% Similarity=0.234 Sum_probs=46.0
Q ss_pred CCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcc-cccccccccccccCcccCC
Q 012213 2 SRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKE-MGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 2 ~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~l~~L~~l~ls~N~l~~ 80 (468)
++|+|++..|..|+++++|+.|+|++|.|++..|..|+++++|++|+|++|.|++ +|+. |.++++|+.|+|++|.+++
T Consensus 83 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~l~~L~~L~Ls~N~l~~ 161 (597)
T 3oja_B 83 NDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSS-LPRGIFHNTPKLTTLSMSNNNLER 161 (597)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCCCB
T ss_pred CCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCC-CCHHHhccCCCCCEEEeeCCcCCC
Confidence 4444544444445555555555555555554334444555555555555555542 3332 3445555555555555554
Q ss_pred CCCC-cccccccCcccccCC
Q 012213 81 EIPE-FGQYSFFNSTSFTGN 99 (468)
Q Consensus 81 ~~p~-~~~~~~~~~~~~~~n 99 (468)
.+|. ++.+.++..+++++|
T Consensus 162 ~~~~~~~~l~~L~~L~L~~N 181 (597)
T 3oja_B 162 IEDDTFQATTSLQNLQLSSN 181 (597)
T ss_dssp CCTTTTTTCTTCCEEECTTS
T ss_pred CChhhhhcCCcCcEEECcCC
Confidence 4442 444444444444444
No 334
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.20 E-value=2.1e-11 Score=122.54 Aligned_cols=100 Identities=16% Similarity=0.085 Sum_probs=75.1
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++..|..|+++++|+.|+|++|+|++..|..|.++++|++|+|++|.|++..+..|..+++|+.|+|++|++++
T Consensus 82 L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 161 (452)
T 3zyi_A 82 LMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIES 161 (452)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCE
T ss_pred CcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcce
Confidence 56788887777778888888888888888886666778888888888888888885444457778888888888888875
Q ss_pred CCC-CcccccccCcccccCCC
Q 012213 81 EIP-EFGQYSFFNSTSFTGNP 100 (468)
Q Consensus 81 ~~p-~~~~~~~~~~~~~~~n~ 100 (468)
.++ .+..+.++..+++++|.
T Consensus 162 ~~~~~~~~l~~L~~L~l~~~~ 182 (452)
T 3zyi_A 162 IPSYAFNRVPSLMRLDLGELK 182 (452)
T ss_dssp ECTTTTTTCTTCCEEECCCCT
T ss_pred eCHhHHhcCCcccEEeCCCCC
Confidence 555 36667777777777654
No 335
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.19 E-value=2.3e-11 Score=125.28 Aligned_cols=101 Identities=23% Similarity=0.313 Sum_probs=62.9
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccc------------------cccccccEeeccCCcccccCCccc
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQI------------------TQIHILNYLNVSWNQLNASLPKEM 62 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~------------------~~l~~L~~l~ls~N~l~g~~p~~~ 62 (468)
|++|+|+ .+|..++.+++|++|+|++|+++ .+|..+ .++++|++|+|++|+|+ .||+ .
T Consensus 394 Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~l~-~ip~-~ 469 (549)
T 2z81_A 394 ISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLK-TLPD-A 469 (549)
T ss_dssp CTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCS-SCCC-G
T ss_pred CCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhcCCceEEECCCCChhhhcccCChhcEEECCCCccC-cCCC-c
Confidence 4566666 56666666666666666666655 333322 25666666666666666 5665 4
Q ss_pred ccccccccccccCcccCCCCCC-cccccccCcccccCCCCCCCC
Q 012213 63 GNMKSLTSADFSHNNFSGEIPE-FGQYSFFNSTSFTGNPHLCGS 105 (468)
Q Consensus 63 ~~l~~L~~l~ls~N~l~~~~p~-~~~~~~~~~~~~~~n~~lcg~ 105 (468)
..+++|+.|+|++|+|++.+|. +..+.++..+++++|++.|.+
T Consensus 470 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 513 (549)
T 2z81_A 470 SLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 513 (549)
T ss_dssp GGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCH
T ss_pred ccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCC
Confidence 5666777777777777766664 566667777777777766654
No 336
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.19 E-value=2.6e-11 Score=116.65 Aligned_cols=79 Identities=19% Similarity=0.209 Sum_probs=37.4
Q ss_pred CCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCCC
Q 012213 2 SRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSGE 81 (468)
Q Consensus 2 ~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~ 81 (468)
++|++++..|..+.++++|+.|+|++|++++..|..+..+++|+.|+|++|.++ .+|..+..+++|+.|++++|++++.
T Consensus 201 ~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~ 279 (332)
T 2ft3_A 201 DHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKV 279 (332)
T ss_dssp CSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBC
T ss_pred CCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCcc
Confidence 344444333344444444455555555444333334444445555555555444 4444444444455555555444433
No 337
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.19 E-value=1.1e-11 Score=131.54 Aligned_cols=81 Identities=27% Similarity=0.417 Sum_probs=78.3
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|+ .+|..|++|++|++|+|++|+|+ .||.+|++|++|++|+|++|.|+ .||..|++|++|+.|+|++|+|+|
T Consensus 254 Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~ 330 (727)
T 4b8c_D 254 LNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEK 330 (727)
T ss_dssp CTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCS
T ss_pred eeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCC
Confidence 6899999 99999999999999999999999 89999999999999999999998 899999999999999999999999
Q ss_pred CCCC
Q 012213 81 EIPE 84 (468)
Q Consensus 81 ~~p~ 84 (468)
.+|.
T Consensus 331 ~~p~ 334 (727)
T 4b8c_D 331 QFLK 334 (727)
T ss_dssp HHHH
T ss_pred CChH
Confidence 9886
No 338
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.18 E-value=6.7e-12 Score=119.72 Aligned_cols=99 Identities=13% Similarity=0.146 Sum_probs=82.2
Q ss_pred CCCCcccccCCccc--ccCCCCCEEEccCCcccccCCcccccc-----ccccEeeccCCcccccCCcccccccccccccc
Q 012213 1 MSRNNFSGIIPVEI--GHCLLLTYLDLSQNHLSGPIPVQITQI-----HILNYLNVSWNQLNASLPKEMGNMKSLTSADF 73 (468)
Q Consensus 1 l~~N~l~g~~p~~~--~~l~~L~~L~l~~n~l~g~~p~~~~~l-----~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~l 73 (468)
|++|+|+|.+|..+ +.+++|++|+|++|++++. |..++++ ++|++|+|++|.+++..|..|+.+++|+.|++
T Consensus 102 L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 180 (312)
T 1wwl_A 102 LENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDL 180 (312)
T ss_dssp EEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEEC
T ss_pred ccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEEC
Confidence 46788988888877 8899999999999999965 8888888 89999999999998766688999999999999
Q ss_pred cCcccCCCC---CCc--ccccccCcccccCCC
Q 012213 74 SHNNFSGEI---PEF--GQYSFFNSTSFTGNP 100 (468)
Q Consensus 74 s~N~l~~~~---p~~--~~~~~~~~~~~~~n~ 100 (468)
++|+++|.+ +.+ ..+.++..+++++|.
T Consensus 181 s~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~ 212 (312)
T 1wwl_A 181 SDNPELGERGLISALCPLKFPTLQVLALRNAG 212 (312)
T ss_dssp CSCTTCHHHHHHHHSCTTSCTTCCEEECTTSC
T ss_pred CCCCcCcchHHHHHHHhccCCCCCEEECCCCc
Confidence 999987752 233 677888888888874
No 339
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.18 E-value=2.4e-11 Score=123.03 Aligned_cols=100 Identities=21% Similarity=0.240 Sum_probs=79.6
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCc-ccccccccccccccCcccC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPK-EMGNMKSLTSADFSHNNFS 79 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~l~~L~~l~ls~N~l~ 79 (468)
|++|+|++..|..|.++++|++|+|++|++++..|..|.+|++|++|+|++|.+++ +|. .|.++++|+.|+|++|+++
T Consensus 39 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~Ls~n~i~ 117 (477)
T 2id5_A 39 LGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKL-IPLGVFTGLSNLTKLDISENKIV 117 (477)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCS-CCTTSSTTCTTCCEEECTTSCCC
T ss_pred CCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCc-cCcccccCCCCCCEEECCCCccc
Confidence 57788887777788888888888888888887778888888888888888888884 544 5778888888888888888
Q ss_pred CCCC-CcccccccCcccccCCCC
Q 012213 80 GEIP-EFGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 80 ~~~p-~~~~~~~~~~~~~~~n~~ 101 (468)
+.+| .+..+.++..+++++|..
T Consensus 118 ~~~~~~~~~l~~L~~L~l~~n~l 140 (477)
T 2id5_A 118 ILLDYMFQDLYNLKSLEVGDNDL 140 (477)
T ss_dssp EECTTTTTTCTTCCEEEECCTTC
T ss_pred cCChhHccccccCCEEECCCCcc
Confidence 7776 367777888888877753
No 340
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.17 E-value=1.5e-11 Score=125.92 Aligned_cols=97 Identities=25% Similarity=0.252 Sum_probs=74.4
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++..|..|.++++|++|+|++|++++..|..|+++++|++|||++|+++ .+|.. .+++|+.|++++|++++
T Consensus 28 Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~~N~l~~ 104 (520)
T 2z7x_B 28 ISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDLSFNAFDA 104 (520)
T ss_dssp CCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEECCSSCCSS
T ss_pred CCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEeccCCcccc
Confidence 5677887666677888888888888888888666778888888888888888887 57766 77888888888888876
Q ss_pred -CCC-CcccccccCcccccCCC
Q 012213 81 -EIP-EFGQYSFFNSTSFTGNP 100 (468)
Q Consensus 81 -~~p-~~~~~~~~~~~~~~~n~ 100 (468)
.+| .++.+.++..+++++|.
T Consensus 105 ~~~p~~~~~l~~L~~L~L~~n~ 126 (520)
T 2z7x_B 105 LPICKEFGNMSQLKFLGLSTTH 126 (520)
T ss_dssp CCCCGGGGGCTTCCEEEEEESS
T ss_pred ccchhhhccCCcceEEEecCcc
Confidence 455 47777777777777765
No 341
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.17 E-value=6.3e-13 Score=118.06 Aligned_cols=97 Identities=15% Similarity=0.211 Sum_probs=86.9
Q ss_pred CCCCcccccCCc------ccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCccccccccccccccc
Q 012213 1 MSRNNFSGIIPV------EIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFS 74 (468)
Q Consensus 1 l~~N~l~g~~p~------~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls 74 (468)
|++|.|+|.+|. .++++++|++|+|++|++++ +| .+.++++|++|+|++|.++ .+|..+..+++|+.|+++
T Consensus 25 l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~ 101 (198)
T 1ds9_A 25 AEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWIS 101 (198)
T ss_dssp CSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEE
T ss_pred hheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECc
Confidence 467888888887 89999999999999999995 88 9999999999999999999 799888888999999999
Q ss_pred CcccCCCCCCcccccccCcccccCCCC
Q 012213 75 HNNFSGEIPEFGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 75 ~N~l~~~~p~~~~~~~~~~~~~~~n~~ 101 (468)
+|++++ +|.+..+.++..+++++|..
T Consensus 102 ~N~l~~-l~~~~~l~~L~~L~l~~N~i 127 (198)
T 1ds9_A 102 YNQIAS-LSGIEKLVNLRVLYMSNNKI 127 (198)
T ss_dssp EEECCC-HHHHHHHHHSSEEEESEEEC
T ss_pred CCcCCc-CCccccCCCCCEEECCCCcC
Confidence 999997 56777888899999998853
No 342
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.17 E-value=1.5e-11 Score=112.59 Aligned_cols=100 Identities=10% Similarity=0.101 Sum_probs=81.0
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCc-ccccCCccccccccccEeeccC-CcccccCCcccccccccccccccCccc
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNH-LSGPIPVQITQIHILNYLNVSW-NQLNASLPKEMGNMKSLTSADFSHNNF 78 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~-l~g~~p~~~~~l~~L~~l~ls~-N~l~g~~p~~~~~l~~L~~l~ls~N~l 78 (468)
|++|+|++..+..|+++++|++|+|++|+ +++..|..|.++++|++|+|++ |.+++..|..|.++++|+.|++++|++
T Consensus 38 l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l 117 (239)
T 2xwt_C 38 LIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGL 117 (239)
T ss_dssp EESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECC
T ss_pred EeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCC
Confidence 46788986666688899999999999997 8844445789999999999998 999864456788899999999999999
Q ss_pred CCCCCCcccccccC---cccccCCCC
Q 012213 79 SGEIPEFGQYSFFN---STSFTGNPH 101 (468)
Q Consensus 79 ~~~~p~~~~~~~~~---~~~~~~n~~ 101 (468)
++ +|.+..+..+. .+++++|+.
T Consensus 118 ~~-lp~~~~l~~L~~L~~L~l~~N~~ 142 (239)
T 2xwt_C 118 KM-FPDLTKVYSTDIFFILEITDNPY 142 (239)
T ss_dssp CS-CCCCTTCCBCCSEEEEEEESCTT
T ss_pred cc-ccccccccccccccEEECCCCcc
Confidence 87 66677777777 888888843
No 343
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.16 E-value=1.9e-11 Score=116.85 Aligned_cols=99 Identities=20% Similarity=0.226 Sum_probs=80.4
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCcccc-ccccccEeeccCCcccccCCcccccccccccccccCcccC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQIT-QIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFS 79 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~-~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~ 79 (468)
|++|+|++..|..++.+++|++|+|++|++++..|..+. ++++|++|+|++|.+++ +|. ...+++|+.|++++|+++
T Consensus 127 l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~-~~~-~~~l~~L~~L~Ls~N~l~ 204 (317)
T 3o53_A 127 LANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD-VKG-QVVFAKLKTLDLSSNKLA 204 (317)
T ss_dssp CCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE-EEC-CCCCTTCCEEECCSSCCC
T ss_pred CCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCcc-ccc-ccccccCCEEECCCCcCC
Confidence 578999877777888899999999999999977677764 78889999999998884 543 345888888888888888
Q ss_pred CCCCCcccccccCcccccCCCC
Q 012213 80 GEIPEFGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 80 ~~~p~~~~~~~~~~~~~~~n~~ 101 (468)
+.+|.+..+.++..+++++|..
T Consensus 205 ~l~~~~~~l~~L~~L~L~~N~l 226 (317)
T 3o53_A 205 FMGPEFQSAAGVTWISLRNNKL 226 (317)
T ss_dssp EECGGGGGGTTCSEEECTTSCC
T ss_pred cchhhhcccCcccEEECcCCcc
Confidence 7777777888888888888854
No 344
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.16 E-value=1.4e-11 Score=128.24 Aligned_cols=98 Identities=22% Similarity=0.186 Sum_probs=77.9
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++ |..++.+++|+.|+|++|++++.+|..|+++++|+.|+|++|.+++ +|..+..+++|+.|+|++|++++
T Consensus 239 L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~~ 315 (597)
T 3oja_B 239 LQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH 315 (597)
T ss_dssp CCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCCC
T ss_pred CCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCCc
Confidence 56788885 3678888888888888888888778888888888888888888885 77777778888888888888886
Q ss_pred CCCCcccccccCcccccCCCC
Q 012213 81 EIPEFGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 81 ~~p~~~~~~~~~~~~~~~n~~ 101 (468)
.++.+..+.++..+++++|..
T Consensus 316 i~~~~~~l~~L~~L~L~~N~l 336 (597)
T 3oja_B 316 VERNQPQFDRLENLYLDHNSI 336 (597)
T ss_dssp CGGGHHHHTTCSEEECCSSCC
T ss_pred cCcccccCCCCCEEECCCCCC
Confidence 555677777788888887754
No 345
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.16 E-value=2.3e-11 Score=131.85 Aligned_cols=100 Identities=13% Similarity=0.141 Sum_probs=54.1
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccC-CccccccccccEeeccCCcccccCCcccccccccccccccCcccC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPI-PVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFS 79 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~-p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~ 79 (468)
|++|+|++..|..|+++++|++|||++|.+.+.+ |..|.+|++|++|+|++|.+++..|..|.++++|+.|+|++|.++
T Consensus 31 Ls~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~ 110 (844)
T 3j0a_A 31 LSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLS 110 (844)
T ss_dssp EESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCS
T ss_pred CCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCC
Confidence 3456666555555555555555555555444444 445555555555555555555544555555555555555555555
Q ss_pred CCCCC---cccccccCcccccCCC
Q 012213 80 GEIPE---FGQYSFFNSTSFTGNP 100 (468)
Q Consensus 80 ~~~p~---~~~~~~~~~~~~~~n~ 100 (468)
+.+|. +..+.+++.+++++|.
T Consensus 111 ~~~~~~~~~~~L~~L~~L~Ls~N~ 134 (844)
T 3j0a_A 111 DAVLKDGYFRNLKALTRLDLSKNQ 134 (844)
T ss_dssp SCCSTTCCCSSCSSCCEEEEESCC
T ss_pred cccccCccccccCCCCEEECCCCc
Confidence 54332 4444555555555443
No 346
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.16 E-value=3e-11 Score=124.87 Aligned_cols=98 Identities=27% Similarity=0.286 Sum_probs=75.0
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++..|..|+++++|++|+|++|++++..|..|.++++|++|||++|.++ .+|.. .+++|+.|++++|++++
T Consensus 59 Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~ 135 (562)
T 3a79_B 59 LSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDLSFNDFDV 135 (562)
T ss_dssp CCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEECCSSCCSB
T ss_pred CCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEECCCCCccc
Confidence 5678887666677888888888888888888666777888888888888888887 67766 77888888888888876
Q ss_pred C-CC-CcccccccCcccccCCCC
Q 012213 81 E-IP-EFGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 81 ~-~p-~~~~~~~~~~~~~~~n~~ 101 (468)
. +| .++.+.++..+++++|..
T Consensus 136 l~~p~~~~~l~~L~~L~L~~n~l 158 (562)
T 3a79_B 136 LPVCKEFGNLTKLTFLGLSAAKF 158 (562)
T ss_dssp CCCCGGGGGCTTCCEEEEECSBC
T ss_pred cCchHhhcccCcccEEecCCCcc
Confidence 3 34 477777788888877753
No 347
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.15 E-value=2.7e-11 Score=117.64 Aligned_cols=96 Identities=24% Similarity=0.270 Sum_probs=52.1
Q ss_pred CCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCCC
Q 012213 2 SRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSGE 81 (468)
Q Consensus 2 ~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~ 81 (468)
++|.|+ .+|..+. ++|++|+|++|++++..+..+.++++|++|+|++|.+++..|..|.++++|+.|++++|++++.
T Consensus 39 ~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 115 (353)
T 2z80_A 39 SSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNL 115 (353)
T ss_dssp CSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSC
T ss_pred CCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcC
Confidence 445555 5555443 3556666666666533333555566666666666665544444555555666666666665544
Q ss_pred CCC-cccccccCcccccCCC
Q 012213 82 IPE-FGQYSFFNSTSFTGNP 100 (468)
Q Consensus 82 ~p~-~~~~~~~~~~~~~~n~ 100 (468)
++. +..+.++..+++++|.
T Consensus 116 ~~~~~~~l~~L~~L~L~~n~ 135 (353)
T 2z80_A 116 SSSWFKPLSSLTFLNLLGNP 135 (353)
T ss_dssp CHHHHTTCTTCSEEECTTCC
T ss_pred CHhHhCCCccCCEEECCCCC
Confidence 433 4555555555555553
No 348
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.15 E-value=1.8e-11 Score=120.62 Aligned_cols=98 Identities=22% Similarity=0.184 Sum_probs=79.3
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|++++. ..++++++|+.|+|++|++++..|..+.++++|+.|+|++|.+++ +|..+..+++|+.|++++|++++
T Consensus 233 l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~~ 309 (390)
T 3o6n_A 233 LQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH 309 (390)
T ss_dssp CCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCCC
T ss_pred CCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCccee
Confidence 567888753 478888888888888888887778888888888888888888884 77777888888888888888886
Q ss_pred CCCCcccccccCcccccCCCC
Q 012213 81 EIPEFGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 81 ~~p~~~~~~~~~~~~~~~n~~ 101 (468)
.++.+..+..+..+++++|+.
T Consensus 310 ~~~~~~~l~~L~~L~L~~N~i 330 (390)
T 3o6n_A 310 VERNQPQFDRLENLYLDHNSI 330 (390)
T ss_dssp CGGGHHHHTTCSEEECCSSCC
T ss_pred cCccccccCcCCEEECCCCcc
Confidence 665677777888888888753
No 349
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.15 E-value=2.5e-11 Score=115.65 Aligned_cols=98 Identities=15% Similarity=0.094 Sum_probs=65.1
Q ss_pred CCCCccccc--CC--cccccCCCCCEEEccCCcccccCCcc----ccccccccEeeccCCcccccCCcccccc---cccc
Q 012213 1 MSRNNFSGI--IP--VEIGHCLLLTYLDLSQNHLSGPIPVQ----ITQIHILNYLNVSWNQLNASLPKEMGNM---KSLT 69 (468)
Q Consensus 1 l~~N~l~g~--~p--~~~~~l~~L~~L~l~~n~l~g~~p~~----~~~l~~L~~l~ls~N~l~g~~p~~~~~l---~~L~ 69 (468)
|++|+++|. +| ..++++++|++|+|++|+++ .+|.. +.++++|++|||++|.+++.+|+.+..+ ++|+
T Consensus 176 Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~ 254 (310)
T 4glp_A 176 LSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALN 254 (310)
T ss_dssp CCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCC
T ss_pred CCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCC
Confidence 567777652 22 22367777888888888876 34432 4677788888888888877667776666 5778
Q ss_pred cccccCcccCCCCCCcccccccCcccccCCCC
Q 012213 70 SADFSHNNFSGEIPEFGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 70 ~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~ 101 (468)
.|+|++|+|+ .+|... ..++..+++++|..
T Consensus 255 ~L~Ls~N~l~-~lp~~~-~~~L~~L~Ls~N~l 284 (310)
T 4glp_A 255 SLNLSFAGLE-QVPKGL-PAKLRVLDLSSNRL 284 (310)
T ss_dssp CEECCSSCCC-SCCSCC-CSCCSCEECCSCCC
T ss_pred EEECCCCCCC-chhhhh-cCCCCEEECCCCcC
Confidence 8888888877 444311 25777777777753
No 350
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.15 E-value=5.6e-11 Score=114.34 Aligned_cols=97 Identities=22% Similarity=0.245 Sum_probs=54.4
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|.++ .+|..+. ++|+.|++++|++++
T Consensus 61 l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~ 137 (332)
T 2ft3_A 61 LQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRK 137 (332)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCC
T ss_pred CCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCc
Confidence 3455555444455556666666666666666544555666666666666666655 4555444 555666666666654
Q ss_pred CCCC-cccccccCcccccCCC
Q 012213 81 EIPE-FGQYSFFNSTSFTGNP 100 (468)
Q Consensus 81 ~~p~-~~~~~~~~~~~~~~n~ 100 (468)
.++. +..+.++..+++++|.
T Consensus 138 ~~~~~~~~l~~L~~L~l~~n~ 158 (332)
T 2ft3_A 138 VPKGVFSGLRNMNCIEMGGNP 158 (332)
T ss_dssp CCSGGGSSCSSCCEEECCSCC
T ss_pred cCHhHhCCCccCCEEECCCCc
Confidence 4443 4555555555555553
No 351
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.14 E-value=5.4e-11 Score=119.10 Aligned_cols=101 Identities=17% Similarity=0.106 Sum_probs=76.9
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++..|..|.++++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|++++
T Consensus 71 L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~ 150 (440)
T 3zyj_A 71 LHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIES 150 (440)
T ss_dssp CCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCE
T ss_pred ccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccc
Confidence 56788887667788888888888888888886556778888888888888888884334467888888888888888886
Q ss_pred CCC-CcccccccCcccccCCCC
Q 012213 81 EIP-EFGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 81 ~~p-~~~~~~~~~~~~~~~n~~ 101 (468)
.++ .+..+.++..+++++|..
T Consensus 151 ~~~~~~~~l~~L~~L~l~~~~~ 172 (440)
T 3zyj_A 151 IPSYAFNRIPSLRRLDLGELKR 172 (440)
T ss_dssp ECTTTTTTCTTCCEEECCCCTT
T ss_pred cCHHHhhhCcccCEeCCCCCCC
Confidence 555 366777777777776543
No 352
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.14 E-value=2.9e-10 Score=110.59 Aligned_cols=142 Identities=15% Similarity=0.227 Sum_probs=105.6
Q ss_pred cceEcccCCcceEEEEcCCCcEEEEEEec--ccCCCCCchhHHHHHHHHHhCCC--CCCccceeEEEecC---CeeEEEE
Q 012213 187 NNVIGRGGAGVVYRGVTPNGEQVAVKKLL--GITKGSSHDNGLSAEIRTLGKIR--HRNIVRLKAFCSNK---ETNLLVY 259 (468)
Q Consensus 187 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~---~~~~lv~ 259 (468)
.+.++.|.++.||+....+ ..+++|+.. .... ......+.+|+.+++.+. +..+.+++.++.+. +..++||
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~-~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vm 120 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKL-LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIM 120 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCC-CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEE
Confidence 4678999999999998754 678888764 2211 111245788999998886 45678889988776 3479999
Q ss_pred eccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcC-------------------------------------
Q 012213 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDC------------------------------------- 302 (468)
Q Consensus 260 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------- 302 (468)
||++|..+.+... ..++...+..++.+++++|+.||...
T Consensus 121 e~v~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (359)
T 3dxp_A 121 EFVSGRVLWDQSL----PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPA 196 (359)
T ss_dssp ECCCCBCCCCTTC----TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHH
T ss_pred EecCCeecCCCcc----ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChH
Confidence 9999988754221 23678888899999999999999731
Q ss_pred ------------------CCCeeecCCCCCcEEEcCCCc--eEEeecccccc
Q 012213 303 ------------------SPLIIHRDVKSNNILLNSDFE--AHVADFGLAKY 334 (468)
Q Consensus 303 ------------------~~~ivH~dlk~~Nill~~~~~--~kl~Dfgla~~ 334 (468)
...++|||+++.||+++.++. +.|+||+.+..
T Consensus 197 ~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 197 MDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 246999999999999998753 68999998864
No 353
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.13 E-value=4.7e-11 Score=115.62 Aligned_cols=80 Identities=19% Similarity=0.123 Sum_probs=69.7
Q ss_pred CCC-CcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccC
Q 012213 1 MSR-NNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFS 79 (468)
Q Consensus 1 l~~-N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~ 79 (468)
|++ |+|++..|..|++|++|+.|+|++|+|++..|..|.+|++|+.|||++|+|++ +|+.+.....|+.|+|++|.|.
T Consensus 38 l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~~~~~~~~~L~~l~l~~N~~~ 116 (347)
T 2ifg_A 38 IENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALES-LSWKTVQGLSLQELVLSGNPLH 116 (347)
T ss_dssp CCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSC-CCSTTTCSCCCCEEECCSSCCC
T ss_pred ccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccce-eCHHHcccCCceEEEeeCCCcc
Confidence 575 99997777899999999999999999998888899999999999999999995 6655444334999999999998
Q ss_pred CC
Q 012213 80 GE 81 (468)
Q Consensus 80 ~~ 81 (468)
..
T Consensus 117 c~ 118 (347)
T 2ifg_A 117 CS 118 (347)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 354
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.13 E-value=8.1e-11 Score=115.86 Aligned_cols=97 Identities=15% Similarity=0.209 Sum_probs=51.6
Q ss_pred CCcccccCCcc-cccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCCC
Q 012213 3 RNNFSGIIPVE-IGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSGE 81 (468)
Q Consensus 3 ~N~l~g~~p~~-~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~ 81 (468)
+|.++ .+|.. +.++++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|..+++|+.|++++|+++..
T Consensus 54 ~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l 132 (390)
T 3o6n_A 54 NSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSL 132 (390)
T ss_dssp SCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CCchh-hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcC
Confidence 44454 33332 45555555566655555544444555555555555555555544444455555555555555555543
Q ss_pred CCC-cccccccCcccccCCC
Q 012213 82 IPE-FGQYSFFNSTSFTGNP 100 (468)
Q Consensus 82 ~p~-~~~~~~~~~~~~~~n~ 100 (468)
++. +..+.++..+++++|.
T Consensus 133 ~~~~~~~l~~L~~L~L~~n~ 152 (390)
T 3o6n_A 133 PRGIFHNTPKLTTLSMSNNN 152 (390)
T ss_dssp CTTTTTTCTTCCEEECCSSC
T ss_pred CHHHhcCCCCCcEEECCCCc
Confidence 333 3455555555555553
No 355
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.10 E-value=1.1e-10 Score=120.87 Aligned_cols=101 Identities=15% Similarity=0.072 Sum_probs=77.6
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|..+++|+.|++++|++++
T Consensus 35 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 114 (570)
T 2z63_A 35 LSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLAS 114 (570)
T ss_dssp CCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCC
T ss_pred ccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccccccccc
Confidence 57788886667788888888888888888886556678888888888888888886556778888888888888888876
Q ss_pred CCC-CcccccccCcccccCCCC
Q 012213 81 EIP-EFGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 81 ~~p-~~~~~~~~~~~~~~~n~~ 101 (468)
..+ .++.+.++..+++++|..
T Consensus 115 l~~~~~~~l~~L~~L~L~~n~l 136 (570)
T 2z63_A 115 LENFPIGHLKTLKELNVAHNLI 136 (570)
T ss_dssp STTCSCTTCTTCCEEECCSSCC
T ss_pred CCCccccccccccEEecCCCcc
Confidence 555 467777777777777743
No 356
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.10 E-value=3.7e-11 Score=114.43 Aligned_cols=98 Identities=17% Similarity=0.126 Sum_probs=62.8
Q ss_pred CCCcccccCCccc--ccCCCCCEEEccCCcccccCC----ccccccccccEeeccCCcccccCCcccccccccccccccC
Q 012213 2 SRNNFSGIIPVEI--GHCLLLTYLDLSQNHLSGPIP----VQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSH 75 (468)
Q Consensus 2 ~~N~l~g~~p~~~--~~l~~L~~L~l~~n~l~g~~p----~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~ 75 (468)
++|++++.+|..+ +++++|++|+|++|++++.+| ..+..+++|++|+|++|.+++..|..|..+++|+.|+|++
T Consensus 99 ~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 178 (310)
T 4glp_A 99 EDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSD 178 (310)
T ss_dssp ESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCS
T ss_pred eCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCC
Confidence 5667776777666 667777777777777776554 3345667777777777777665556667777777777777
Q ss_pred cccCC---CCCC--cccccccCcccccCC
Q 012213 76 NNFSG---EIPE--FGQYSFFNSTSFTGN 99 (468)
Q Consensus 76 N~l~~---~~p~--~~~~~~~~~~~~~~n 99 (468)
|++++ .++. ++.++++..+++++|
T Consensus 179 N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N 207 (310)
T 4glp_A 179 NPGLGERGLMAALCPHKFPAIQNLALRNT 207 (310)
T ss_dssp CTTCHHHHHHTTSCTTSSCCCCSCBCCSS
T ss_pred CCCccchhhhHHHhhhcCCCCCEEECCCC
Confidence 76654 2222 245556666666665
No 357
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.10 E-value=9.9e-11 Score=123.87 Aligned_cols=100 Identities=19% Similarity=0.223 Sum_probs=74.6
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCc-ccccccccccccccCcccC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPK-EMGNMKSLTSADFSHNNFS 79 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~l~~L~~l~ls~N~l~ 79 (468)
|++|+|++..|..|+++++|++|+|++|++++..|..+++|++|++|+|++|.+++ +|+ .|+++++|+.|++++|+++
T Consensus 32 Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~l~~L~~L~L~~n~l~ 110 (680)
T 1ziw_A 32 LTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQ-LSDKTFAFCTNLTELHLMSNSIQ 110 (680)
T ss_dssp CCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCC-CCTTTTTTCTTCSEEECCSSCCC
T ss_pred CCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCc-cChhhhccCCCCCEEECCCCccC
Confidence 56778876556678888888888888888887777778888888888888888874 554 5777888888888888877
Q ss_pred CCCC-CcccccccCcccccCCCC
Q 012213 80 GEIP-EFGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 80 ~~~p-~~~~~~~~~~~~~~~n~~ 101 (468)
+.+| .++.+.++..+++++|..
T Consensus 111 ~~~~~~~~~l~~L~~L~Ls~n~l 133 (680)
T 1ziw_A 111 KIKNNPFVKQKNLITLDLSHNGL 133 (680)
T ss_dssp CCCSCTTTTCTTCCEEECCSSCC
T ss_pred ccChhHccccCCCCEEECCCCcc
Confidence 6665 367777777777777743
No 358
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.09 E-value=2.4e-10 Score=109.74 Aligned_cols=99 Identities=15% Similarity=0.252 Sum_probs=73.5
Q ss_pred CCCCccc--ccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCccc
Q 012213 1 MSRNNFS--GIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNF 78 (468)
Q Consensus 1 l~~N~l~--g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l 78 (468)
|++|+++ |..|..+.++++|+.|++++|+++ .+|..+. ++|+.|+|++|.+++..|..|..+++|+.|++++|++
T Consensus 152 l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 228 (330)
T 1xku_A 152 LGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSI 228 (330)
T ss_dssp CCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCC
T ss_pred CCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcC
Confidence 4567774 356677778888888888888887 5776664 7788888888888876677778888888888888888
Q ss_pred CCCCC-CcccccccCcccccCCCCC
Q 012213 79 SGEIP-EFGQYSFFNSTSFTGNPHL 102 (468)
Q Consensus 79 ~~~~p-~~~~~~~~~~~~~~~n~~l 102 (468)
++.+| .+..+.++..+++++|...
T Consensus 229 ~~~~~~~~~~l~~L~~L~L~~N~l~ 253 (330)
T 1xku_A 229 SAVDNGSLANTPHLRELHLNNNKLV 253 (330)
T ss_dssp CEECTTTGGGSTTCCEEECCSSCCS
T ss_pred ceeChhhccCCCCCCEEECCCCcCc
Confidence 77666 4667777777777777543
No 359
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.09 E-value=1.1e-10 Score=123.57 Aligned_cols=99 Identities=21% Similarity=0.194 Sum_probs=86.2
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCc-cccccccccEeeccCCcccccCCcccccccccccccccCcccC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPV-QITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFS 79 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~-~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~ 79 (468)
|++|++++..|..|+++++|++|+|++|+++ .+|. .|+++++|++|+|++|.+++..|..|+++++|+.|++++|+++
T Consensus 56 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~ 134 (680)
T 1ziw_A 56 VGFNTISKLEPELCQKLPMLKVLNLQHNELS-QLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLS 134 (680)
T ss_dssp CCSSCCCCCCTTHHHHCTTCCEEECCSSCCC-CCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCS
T ss_pred CCCCccCccCHHHHhcccCcCEEECCCCccC-ccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCccc
Confidence 5789999888889999999999999999999 5655 6999999999999999998655678999999999999999999
Q ss_pred CCCCC-cccccccCcccccCCC
Q 012213 80 GEIPE-FGQYSFFNSTSFTGNP 100 (468)
Q Consensus 80 ~~~p~-~~~~~~~~~~~~~~n~ 100 (468)
+.+|. ++.+.++..+++++|.
T Consensus 135 ~~~~~~~~~l~~L~~L~L~~n~ 156 (680)
T 1ziw_A 135 STKLGTQVQLENLQELLLSNNK 156 (680)
T ss_dssp CCCCCSSSCCTTCCEEECCSSC
T ss_pred ccCchhhcccccCCEEEccCCc
Confidence 88774 7788888888888875
No 360
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.08 E-value=6.8e-11 Score=112.97 Aligned_cols=96 Identities=13% Similarity=0.108 Sum_probs=56.3
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccc-cccccccccccCcccC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMG-NMKSLTSADFSHNNFS 79 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~-~l~~L~~l~ls~N~l~ 79 (468)
|++|+|++..+. .+++|+.|+|++|++++..|..++.+++|++|+|++|.+++..|..+. .+++|+.|++++|+++
T Consensus 106 l~~n~l~~~~~~---~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~ 182 (317)
T 3o53_A 106 AANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (317)
T ss_dssp CCSSCCSEEEEC---CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred CCCCccCCcCcc---ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCc
Confidence 345566543332 245666666666666655555666666666666666666655555543 5666666666666666
Q ss_pred CCCCCcccccccCcccccCCC
Q 012213 80 GEIPEFGQYSFFNSTSFTGNP 100 (468)
Q Consensus 80 ~~~p~~~~~~~~~~~~~~~n~ 100 (468)
+. |....+.++..+++++|.
T Consensus 183 ~~-~~~~~l~~L~~L~Ls~N~ 202 (317)
T 3o53_A 183 DV-KGQVVFAKLKTLDLSSNK 202 (317)
T ss_dssp EE-ECCCCCTTCCEEECCSSC
T ss_pred cc-ccccccccCCEEECCCCc
Confidence 44 333345566666666664
No 361
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.05 E-value=2.8e-12 Score=113.85 Aligned_cols=97 Identities=22% Similarity=0.261 Sum_probs=86.6
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++ +| .++++++|+.|+|++|+++ .+|..+..+++|+.|+|++|.+++ +| .+..+++|+.|++++|++++
T Consensus 55 ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~ 129 (198)
T 1ds9_A 55 LSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITN 129 (198)
T ss_dssp CSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCC
T ss_pred CCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCc
Confidence 57899995 88 9999999999999999999 899999999999999999999995 77 68999999999999999996
Q ss_pred CCC--CcccccccCcccccCCCCC
Q 012213 81 EIP--EFGQYSFFNSTSFTGNPHL 102 (468)
Q Consensus 81 ~~p--~~~~~~~~~~~~~~~n~~l 102 (468)
..+ .+..+.++..+++++|+..
T Consensus 130 ~~~~~~l~~l~~L~~L~l~~N~l~ 153 (198)
T 1ds9_A 130 WGEIDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp HHHHHHHTTTTTCSEEEECSCHHH
T ss_pred hhHHHHHhcCCCCCEEEecCCccc
Confidence 443 5778889999999998653
No 362
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.05 E-value=2.4e-10 Score=106.03 Aligned_cols=63 Identities=13% Similarity=0.208 Sum_probs=28.7
Q ss_pred cccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 14 IGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 14 ~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
+..+++|+.|+|++|+++ .+| .+..+++|+.|+|++|.+++ +|+ +..+++|+.|++++|++++
T Consensus 37 ~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~-~~~-l~~l~~L~~L~L~~N~l~~ 99 (263)
T 1xeu_A 37 QKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISD-LSP-LKDLTKLEELSVNRNRLKN 99 (263)
T ss_dssp HHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCSSCCEEECCSSCCSC
T ss_pred hhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCC-Chh-hccCCCCCEEECCCCccCC
Confidence 444444444444444444 344 34444444444444444442 332 4444444444444444443
No 363
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.04 E-value=1.8e-10 Score=111.72 Aligned_cols=99 Identities=19% Similarity=0.225 Sum_probs=88.1
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcc-cccccccccccccCcccC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKE-MGNMKSLTSADFSHNNFS 79 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~l~~L~~l~ls~N~l~ 79 (468)
|++|+|++..+..++++++|++|+|++|++++..|..|.++++|++|+|++|.+++ +|+. |..+++|+.|++++|+++
T Consensus 59 l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~ 137 (353)
T 2z80_A 59 LSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSN-LSSSWFKPLSSLTFLNLLGNPYK 137 (353)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSS-CCHHHHTTCTTCSEEECTTCCCS
T ss_pred CCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCc-CCHhHhCCCccCCEEECCCCCCc
Confidence 67899996656689999999999999999998778889999999999999999995 6665 899999999999999999
Q ss_pred CCCC--CcccccccCcccccCCC
Q 012213 80 GEIP--EFGQYSFFNSTSFTGNP 100 (468)
Q Consensus 80 ~~~p--~~~~~~~~~~~~~~~n~ 100 (468)
+.++ .+..+.++..+++++|.
T Consensus 138 ~l~~~~~~~~l~~L~~L~l~~n~ 160 (353)
T 2z80_A 138 TLGETSLFSHLTKLQILRVGNMD 160 (353)
T ss_dssp SSCSSCSCTTCTTCCEEEEEESS
T ss_pred ccCchhhhccCCCCcEEECCCCc
Confidence 6655 37888999999999884
No 364
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.03 E-value=3e-10 Score=105.38 Aligned_cols=92 Identities=18% Similarity=0.205 Sum_probs=60.0
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|+ .+| .++.+++|+.|+|++|+|+ .+|. +.++++|+.|+|++|++++ +|... . ++|+.|++++|++++
T Consensus 48 l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~-~~~~-l~~l~~L~~L~L~~N~l~~-l~~~~-~-~~L~~L~L~~N~l~~ 120 (263)
T 1xeu_A 48 GDNSNIQ-SLA-GMQFFTNLKELHLSHNQIS-DLSP-LKDLTKLEELSVNRNRLKN-LNGIP-S-ACLSRLFLDNNELRD 120 (263)
T ss_dssp CTTSCCC-CCT-TGGGCTTCCEEECCSSCCC-CCGG-GTTCSSCCEEECCSSCCSC-CTTCC-C-SSCCEEECCSSCCSB
T ss_pred CcCCCcc-cch-HHhhCCCCCEEECCCCccC-CChh-hccCCCCCEEECCCCccCC-cCccc-c-CcccEEEccCCccCC
Confidence 4667776 566 6777777777777777777 3444 7777777777777777773 55432 2 666666666666664
Q ss_pred CCCCcccccccCcccccCCC
Q 012213 81 EIPEFGQYSFFNSTSFTGNP 100 (468)
Q Consensus 81 ~~p~~~~~~~~~~~~~~~n~ 100 (468)
+|.+..+.++..+++++|.
T Consensus 121 -~~~l~~l~~L~~L~Ls~N~ 139 (263)
T 1xeu_A 121 -TDSLIHLKNLEILSIRNNK 139 (263)
T ss_dssp -SGGGTTCTTCCEEECTTSC
T ss_pred -ChhhcCcccccEEECCCCc
Confidence 3445556666666666654
No 365
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.03 E-value=3.3e-10 Score=106.77 Aligned_cols=94 Identities=15% Similarity=0.284 Sum_probs=74.5
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++ +|. ++++++|+.|+|++|++++ +| .+.++++|+.|+|++|.+++ + +.+..+++|+.|++++|++++
T Consensus 75 L~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~ 148 (291)
T 1h6t_A 75 LNGNKLTD-IKP-LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITD 148 (291)
T ss_dssp CCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCC
T ss_pred ccCCccCC-Ccc-cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCc
Confidence 57888885 444 8888889999999998884 55 48888888888888888884 5 467888888888888888886
Q ss_pred CCCCcccccccCcccccCCCC
Q 012213 81 EIPEFGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 81 ~~p~~~~~~~~~~~~~~~n~~ 101 (468)
. +.+..+.++..+++++|..
T Consensus 149 ~-~~l~~l~~L~~L~L~~N~l 168 (291)
T 1h6t_A 149 I-TVLSRLTKLDTLSLEDNQI 168 (291)
T ss_dssp C-GGGGGCTTCSEEECCSSCC
T ss_pred c-hhhccCCCCCEEEccCCcc
Confidence 5 6677778888888887753
No 366
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.02 E-value=1.2e-10 Score=106.52 Aligned_cols=99 Identities=12% Similarity=0.158 Sum_probs=84.1
Q ss_pred CCCCc-ccccCCcccccCCCCCEEEccC-CcccccCCccccccccccEeeccCCcccccCCcccccccccc---cccccC
Q 012213 1 MSRNN-FSGIIPVEIGHCLLLTYLDLSQ-NHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLT---SADFSH 75 (468)
Q Consensus 1 l~~N~-l~g~~p~~~~~l~~L~~L~l~~-n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~---~l~ls~ 75 (468)
|++|+ +++..|..|+++++|++|+|++ |+|++..|..|.++++|++|+|++|.+++ +|+ |..+++|+ .|++++
T Consensus 62 l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~ 139 (239)
T 2xwt_C 62 VSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITD 139 (239)
T ss_dssp EECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEES
T ss_pred CCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCC
Confidence 46786 8855556899999999999998 99996555789999999999999999995 887 88888888 999999
Q ss_pred c-ccCCCCCC-cccccccC-cccccCCCC
Q 012213 76 N-NFSGEIPE-FGQYSFFN-STSFTGNPH 101 (468)
Q Consensus 76 N-~l~~~~p~-~~~~~~~~-~~~~~~n~~ 101 (468)
| ++++.++. +..+.++. .+++++|..
T Consensus 140 N~~l~~i~~~~~~~l~~L~~~L~l~~n~l 168 (239)
T 2xwt_C 140 NPYMTSIPVNAFQGLCNETLTLKLYNNGF 168 (239)
T ss_dssp CTTCCEECTTTTTTTBSSEEEEECCSCCC
T ss_pred CcchhhcCcccccchhcceeEEEcCCCCC
Confidence 9 99877664 78888888 999988853
No 367
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.02 E-value=3.6e-10 Score=107.51 Aligned_cols=94 Identities=16% Similarity=0.278 Sum_probs=69.0
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++ +| .++++++|++|+|++|++++ +|. +.++++|+.|+|++|.+++ +|+ +..+++|+.|++++|++++
T Consensus 92 L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~ 165 (308)
T 1h6u_A 92 LSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITN-ISP-LAGLTNLQYLSIGNAQVSD 165 (308)
T ss_dssp CCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CGG-GGGCTTCCEEECCSSCCCC
T ss_pred ccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCc-Ccc-ccCCCCccEEEccCCcCCC
Confidence 56788874 44 67788888888888888884 553 7888888888888888874 544 7777888888888888876
Q ss_pred CCCCcccccccCcccccCCCC
Q 012213 81 EIPEFGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 81 ~~p~~~~~~~~~~~~~~~n~~ 101 (468)
..+ +..+.++..+++++|..
T Consensus 166 ~~~-l~~l~~L~~L~l~~n~l 185 (308)
T 1h6u_A 166 LTP-LANLSKLTTLKADDNKI 185 (308)
T ss_dssp CGG-GTTCTTCCEEECCSSCC
T ss_pred Chh-hcCCCCCCEEECCCCcc
Confidence 444 66777777777777743
No 368
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.02 E-value=1.3e-10 Score=117.87 Aligned_cols=97 Identities=12% Similarity=0.095 Sum_probs=81.9
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccc-cccccccccccCcccC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMG-NMKSLTSADFSHNNFS 79 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~-~l~~L~~l~ls~N~l~ 79 (468)
|++|+|++..+. .+++|+.|+|++|+|++..|..++++++|++|+|++|.+++.+|..+. .+++|+.|+|++|.|+
T Consensus 106 L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~ 182 (487)
T 3oja_A 106 AANNNISRVSCS---RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (487)
T ss_dssp CCSSCCCCEEEC---CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred CcCCcCCCCCcc---ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccc
Confidence 467777754443 467899999999999988888999999999999999999998888886 7999999999999999
Q ss_pred CCCCCcccccccCcccccCCCC
Q 012213 80 GEIPEFGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 80 ~~~p~~~~~~~~~~~~~~~n~~ 101 (468)
+.+ ....++++..+++++|..
T Consensus 183 ~~~-~~~~l~~L~~L~Ls~N~l 203 (487)
T 3oja_A 183 DVK-GQVVFAKLKTLDLSSNKL 203 (487)
T ss_dssp EEE-CCCCCTTCCEEECCSSCC
T ss_pred ccc-ccccCCCCCEEECCCCCC
Confidence 774 445688899999998854
No 369
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.02 E-value=3.3e-10 Score=106.83 Aligned_cols=94 Identities=21% Similarity=0.271 Sum_probs=81.4
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
+++|.++ .+| .+..+++|++|+|++|++++ +|. +.++++|++|+|++|.+++ +| .+..+++|+.|++++|++++
T Consensus 53 l~~~~i~-~~~-~~~~l~~L~~L~L~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~ 126 (291)
T 1h6t_A 53 ANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTD-IKP-LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD 126 (291)
T ss_dssp CTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC
T ss_pred ccCCCcc-cCh-hHhcCCCCCEEEccCCccCC-Ccc-cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC
Confidence 5788888 566 48999999999999999995 555 9999999999999999985 65 49999999999999999996
Q ss_pred CCCCcccccccCcccccCCCC
Q 012213 81 EIPEFGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 81 ~~p~~~~~~~~~~~~~~~n~~ 101 (468)
++.+..+.++..+++++|..
T Consensus 127 -~~~l~~l~~L~~L~l~~n~l 146 (291)
T 1h6t_A 127 -INGLVHLPQLESLYLGNNKI 146 (291)
T ss_dssp -CGGGGGCTTCCEEECCSSCC
T ss_pred -ChhhcCCCCCCEEEccCCcC
Confidence 47788888999999998854
No 370
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.02 E-value=3.8e-10 Score=107.33 Aligned_cols=93 Identities=14% Similarity=0.203 Sum_probs=69.7
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+++ .+| .+..+++|+.|+|++|+++ .+|. +.++++|++|+|++|.+++ +| .+..+++|+.|++++|++++
T Consensus 48 l~~~~i~-~l~-~~~~l~~L~~L~L~~n~i~-~~~~-~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~ 121 (308)
T 1h6u_A 48 AFGTGVT-TIE-GVQYLNNLIGLELKDNQIT-DLAP-LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD 121 (308)
T ss_dssp CTTSCCC-CCT-TGGGCTTCCEEECCSSCCC-CCGG-GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC
T ss_pred eeCCCcc-Cch-hhhccCCCCEEEccCCcCC-CChh-HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC
Confidence 4677777 566 5778888888888888888 4555 8888888888888888874 54 57788888888888888876
Q ss_pred CCCCcccccccCcccccCCC
Q 012213 81 EIPEFGQYSFFNSTSFTGNP 100 (468)
Q Consensus 81 ~~p~~~~~~~~~~~~~~~n~ 100 (468)
. |.+..+.++..+++++|.
T Consensus 122 ~-~~l~~l~~L~~L~l~~n~ 140 (308)
T 1h6u_A 122 V-TPLAGLSNLQVLYLDLNQ 140 (308)
T ss_dssp C-GGGTTCTTCCEEECCSSC
T ss_pred c-hhhcCCCCCCEEECCCCc
Confidence 3 446777777777777774
No 371
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.98 E-value=4.3e-10 Score=108.67 Aligned_cols=95 Identities=22% Similarity=0.350 Sum_probs=65.1
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+++ .+|. +..+++|++|+|++|++++ + ..+..+++|+.|+|++|.+++ +| .+..+++|+.|++++|++++
T Consensus 228 l~~n~l~-~~~~-~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~L~~n~l~~ 301 (347)
T 4fmz_A 228 IGNNKIT-DLSP-LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISD-IS-VLNNLSQLNSLFLNNNQLGN 301 (347)
T ss_dssp CCSSCCC-CCGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCC-CG-GGGGCTTCSEEECCSSCCCG
T ss_pred ccCCccC-CCcc-hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCC-Ch-hhcCCCCCCEEECcCCcCCC
Confidence 4677777 3443 7777777777777777773 4 357777777777777777774 43 46777777777777777776
Q ss_pred CCCC-cccccccCcccccCCCC
Q 012213 81 EIPE-FGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 81 ~~p~-~~~~~~~~~~~~~~n~~ 101 (468)
..|. +..+.++..+++++|+.
T Consensus 302 ~~~~~l~~l~~L~~L~L~~n~l 323 (347)
T 4fmz_A 302 EDMEVIGGLTNLTTLFLSQNHI 323 (347)
T ss_dssp GGHHHHHTCTTCSEEECCSSSC
T ss_pred cChhHhhccccCCEEEccCCcc
Confidence 6653 56666777777777754
No 372
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.97 E-value=3.3e-10 Score=107.53 Aligned_cols=187 Identities=19% Similarity=0.181 Sum_probs=119.5
Q ss_pred cceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCC-CCC--ccceeEEEecCC---eeEEEEe
Q 012213 187 NNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIR-HRN--IVRLKAFCSNKE---TNLLVYE 260 (468)
Q Consensus 187 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~n--iv~l~~~~~~~~---~~~lv~e 260 (468)
.+.++.|.+..||+.. ..+++|..... .....+.+|.+.++.+. +.. +.+++.+..... ..++||+
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~ 96 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFT 96 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEE
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEc
Confidence 3568999999999863 56889975422 22356889999998773 332 334554443333 3478999
Q ss_pred ccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhc---------------------------------------
Q 012213 261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHD--------------------------------------- 301 (468)
Q Consensus 261 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~--------------------------------------- 301 (468)
+++|.++.+... ..++..++..++.++++.++.||..
T Consensus 97 ~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
T 3sg8_A 97 KIKGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK 172 (304)
T ss_dssp CCCCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred ccCCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence 999988865332 1256777788888888888888851
Q ss_pred ----------------CCCCeeecCCCCCcEEEcC--CCceEEeeccccccccccCCCccccc------------cccCc
Q 012213 302 ----------------CSPLIIHRDVKSNNILLNS--DFEAHVADFGLAKYLQDTGASECMSA------------VAGSY 351 (468)
Q Consensus 302 ----------------~~~~ivH~dlk~~Nill~~--~~~~kl~Dfgla~~~~~~~~~~~~~~------------~~gt~ 351 (468)
....++|+|++|.||++++ ...+.|+||+.+..-.....-..... ....+
T Consensus 173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y 252 (304)
T 3sg8_A 173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFISLMEDDEEYGMEFVSKILNHY 252 (304)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHHTTCCTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHHHHHhhccccCHHHHHHHHHHc
Confidence 1245899999999999998 45678999999865321000000000 00000
Q ss_pred cccC-ccccCCCCCCcchhhHHHHHHHHHHHhCCCCC
Q 012213 352 GYIA-PEYAYTLKVDEKSDVYSFGVVLLELITGRRPV 387 (468)
Q Consensus 352 ~y~a-PE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~ 387 (468)
+... |+.... .....+.|+++.++|.+.+|..+|
T Consensus 253 ~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 253 KHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp TCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 1111 111110 112368999999999999998876
No 373
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.97 E-value=7.1e-10 Score=114.95 Aligned_cols=92 Identities=16% Similarity=0.316 Sum_probs=48.1
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++..| ++.|++|+.|+|++|+|+ .+| .+.+|++|+.|+|++|.|++ +| .+..|++|+.|+|++|+|++
T Consensus 72 Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~-~l~-~l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~ 145 (605)
T 1m9s_A 72 LNGNKLTDIKP--LTNLKNLGWLFLDENKIK-DLS-SLKDLKKLKSLSLEHNGISD-IN-GLVHLPQLESLYLGNNKITD 145 (605)
T ss_dssp CTTSCCCCCGG--GGGCTTCCEEECCSSCCC-CCT-TSTTCTTCCEEECTTSCCCC-CG-GGGGCTTCSEEECCSSCCCC
T ss_pred eeCCCCCCChh--hccCCCCCEEECcCCCCC-CCh-hhccCCCCCEEEecCCCCCC-Cc-cccCCCccCEEECCCCccCC
Confidence 45566653322 555666666666666655 233 45555555555555555553 32 35555555555555555554
Q ss_pred CCCCcccccccCcccccCC
Q 012213 81 EIPEFGQYSFFNSTSFTGN 99 (468)
Q Consensus 81 ~~p~~~~~~~~~~~~~~~n 99 (468)
. +.+..+.+|..+++++|
T Consensus 146 l-~~l~~l~~L~~L~Ls~N 163 (605)
T 1m9s_A 146 I-TVLSRLTKLDTLSLEDN 163 (605)
T ss_dssp C-GGGGSCTTCSEEECCSS
T ss_pred c-hhhcccCCCCEEECcCC
Confidence 3 44444455555555544
No 374
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.96 E-value=5.9e-10 Score=115.55 Aligned_cols=94 Identities=16% Similarity=0.284 Sum_probs=70.7
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++ +| .++.|++|+.|+|++|+|++ + ..+.+|++|+.|+|++|.|++ + +.+..+++|+.|+|++|+|++
T Consensus 94 Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~ 167 (605)
T 1m9s_A 94 LDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITD-I-TVLSRLTKLDTLSLEDNQISD 167 (605)
T ss_dssp CCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCC-C-GGGGSCTTCSEEECCSSCCCC
T ss_pred CcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCC-c-hhhcccCCCCEEECcCCcCCC
Confidence 56788873 45 67888888888888888884 4 357788888888888888874 4 567778888888888888887
Q ss_pred CCCCcccccccCcccccCCCC
Q 012213 81 EIPEFGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 81 ~~p~~~~~~~~~~~~~~~n~~ 101 (468)
.+| +..+.+|..+++++|..
T Consensus 168 ~~~-l~~l~~L~~L~Ls~N~i 187 (605)
T 1m9s_A 168 IVP-LAGLTKLQNLYLSKNHI 187 (605)
T ss_dssp CGG-GTTCTTCCEEECCSSCC
T ss_pred chh-hccCCCCCEEECcCCCC
Confidence 666 67777777777777743
No 375
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.92 E-value=1e-09 Score=112.60 Aligned_cols=86 Identities=27% Similarity=0.308 Sum_probs=57.5
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|.|++ +|. |. ++|+.|+|++|+|+
T Consensus 127 Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~- 193 (571)
T 3cvr_A 127 VDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE- 193 (571)
T ss_dssp CCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-
T ss_pred CCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-
Confidence 56777774 665 56777788888887774 775 56777778888887775 776 55 67777777777777
Q ss_pred CCCCccccccc-------CcccccCCCC
Q 012213 81 EIPEFGQYSFF-------NSTSFTGNPH 101 (468)
Q Consensus 81 ~~p~~~~~~~~-------~~~~~~~n~~ 101 (468)
.+|.+.. ++ ..+++++|..
T Consensus 194 ~lp~~~~--~L~~~~~~L~~L~Ls~N~l 219 (571)
T 3cvr_A 194 SLPAVPV--RNHHSEETEIFFRCRENRI 219 (571)
T ss_dssp SCCCCC----------CCEEEECCSSCC
T ss_pred chhhHHH--hhhcccccceEEecCCCcc
Confidence 4444333 45 6666776643
No 376
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.91 E-value=1.9e-09 Score=108.21 Aligned_cols=90 Identities=19% Similarity=0.233 Sum_probs=67.9
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++ +| .++.+++|++|+|++|+|++ +| ++++++|++|+|++|.+++ +| ++.+++|+.|++++|++++
T Consensus 49 Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~L~~N~l~~ 120 (457)
T 3bz5_A 49 CHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNCDTNKLTK 120 (457)
T ss_dssp CCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEECCSSCCSC
T ss_pred ccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEECCCCcCCe
Confidence 56788874 45 68888888888888888885 55 7788888888888888875 44 7778888888888888876
Q ss_pred CCCCcccccccCcccccCCC
Q 012213 81 EIPEFGQYSFFNSTSFTGNP 100 (468)
Q Consensus 81 ~~p~~~~~~~~~~~~~~~n~ 100 (468)
. | ++.+.++..+++++|.
T Consensus 121 l-~-~~~l~~L~~L~l~~N~ 138 (457)
T 3bz5_A 121 L-D-VSQNPLLTYLNCARNT 138 (457)
T ss_dssp C-C-CTTCTTCCEEECTTSC
T ss_pred e-c-CCCCCcCCEEECCCCc
Confidence 3 4 6667777777777764
No 377
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.91 E-value=9.8e-10 Score=110.77 Aligned_cols=93 Identities=25% Similarity=0.356 Sum_probs=53.0
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|++++ +|. +..+++|+.|+|++|++++ +|. +.++++|+.|+|++|.+++..| +..+++|+.|++++|++++
T Consensus 272 l~~n~l~~-~~~-~~~l~~L~~L~L~~n~l~~-~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~ 345 (466)
T 1o6v_A 272 LGANQISN-ISP-LAGLTALTNLELNENQLED-ISP-ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSD 345 (466)
T ss_dssp CCSSCCCC-CGG-GTTCTTCSEEECCSSCCSC-CGG-GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred CCCCccCc-ccc-ccCCCccCeEEcCCCcccC-chh-hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCC
Confidence 45666664 332 6666666666666666664 332 5666666666666666664333 5555666666666666554
Q ss_pred CCCCcccccccCcccccCCC
Q 012213 81 EIPEFGQYSFFNSTSFTGNP 100 (468)
Q Consensus 81 ~~p~~~~~~~~~~~~~~~n~ 100 (468)
. +.+..+.++..+++++|.
T Consensus 346 ~-~~l~~l~~L~~L~l~~n~ 364 (466)
T 1o6v_A 346 V-SSLANLTNINWLSAGHNQ 364 (466)
T ss_dssp C-GGGTTCTTCCEEECCSSC
T ss_pred c-hhhccCCCCCEEeCCCCc
Confidence 3 445555555555555553
No 378
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.91 E-value=1.7e-09 Score=110.98 Aligned_cols=86 Identities=28% Similarity=0.451 Sum_probs=47.7
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++ +|..+. ++|+.|+|++|+|+ .|| ..+++|++|+|++|+|++ +|. +.+ +|+.|+|++|+|++
T Consensus 66 Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~ 134 (571)
T 3cvr_A 66 LNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM 134 (571)
T ss_dssp CCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC
T ss_pred eCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC
Confidence 45666664 565552 55666666666666 555 345566666666666664 555 443 55566666666555
Q ss_pred CCCCcccccccCcccccCCC
Q 012213 81 EIPEFGQYSFFNSTSFTGNP 100 (468)
Q Consensus 81 ~~p~~~~~~~~~~~~~~~n~ 100 (468)
+|. .+.++..+++++|.
T Consensus 135 -lp~--~l~~L~~L~Ls~N~ 151 (571)
T 3cvr_A 135 -LPE--LPALLEYINADNNQ 151 (571)
T ss_dssp -CCC--CCTTCCEEECCSSC
T ss_pred -CCC--cCccccEEeCCCCc
Confidence 333 34455555555553
No 379
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.87 E-value=1.9e-10 Score=115.39 Aligned_cols=55 Identities=15% Similarity=0.048 Sum_probs=30.0
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccc-------------cEeeccCCcccc
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHIL-------------NYLNVSWNQLNA 56 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L-------------~~l~ls~N~l~g 56 (468)
|++|+| |.+|.+|++|++|++|+|++|+++|.+|.+++++.+| +.|++++|.+++
T Consensus 18 l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~ 85 (454)
T 1jl5_A 18 RHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS 85 (454)
T ss_dssp -----------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC
T ss_pred cccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc
Confidence 467888 7999999999999999999999998999888877654 556666666553
No 380
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.85 E-value=4.4e-09 Score=105.46 Aligned_cols=74 Identities=28% Similarity=0.473 Sum_probs=35.4
Q ss_pred CCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCCCCCCcccccccCcccccC
Q 012213 19 LLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSGEIPEFGQYSFFNSTSFTG 98 (468)
Q Consensus 19 ~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~ 98 (468)
+|++|+|++|++++ +| +++++++|++|+|++|++++ +|..+ .+|+.|++++|++++ +|.++.+..+..+++++
T Consensus 132 ~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~~~~~l~~L~~L~l~~ 204 (454)
T 1jl5_A 132 LLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LPELQNLPFLTAIYADN 204 (454)
T ss_dssp TCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CCCCTTCTTCCEEECCS
T ss_pred CCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-CccccCCCCCCEEECCC
Confidence 45555555555553 44 35555555555555555553 44332 244455555555544 33444444444444444
Q ss_pred C
Q 012213 99 N 99 (468)
Q Consensus 99 n 99 (468)
|
T Consensus 205 N 205 (454)
T 1jl5_A 205 N 205 (454)
T ss_dssp S
T ss_pred C
Confidence 4
No 381
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.84 E-value=3.9e-09 Score=106.40 Aligned_cols=91 Identities=21% Similarity=0.328 Sum_probs=45.1
Q ss_pred CCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCCC
Q 012213 2 SRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSGE 81 (468)
Q Consensus 2 ~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~ 81 (468)
++|++++ ++ .+..+++|+.|+|++|++++..| +.++++|+.|+|++|.+++ +|+ +..+++|+.|++++|++++.
T Consensus 229 ~~n~l~~-~~-~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~~-~~~l~~L~~L~L~~n~l~~~ 302 (466)
T 1o6v_A 229 NGNQLKD-IG-TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN-ISP-LAGLTALTNLELNENQLEDI 302 (466)
T ss_dssp CSSCCCC-CG-GGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCC-CGG-GTTCTTCSEEECCSSCCSCC
T ss_pred CCCCccc-ch-hhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCc-ccc-ccCCCccCeEEcCCCcccCc
Confidence 4555552 32 45555555555555555553222 5555555555555555553 332 44555555555555555543
Q ss_pred CCCcccccccCcccccCC
Q 012213 82 IPEFGQYSFFNSTSFTGN 99 (468)
Q Consensus 82 ~p~~~~~~~~~~~~~~~n 99 (468)
+| +..+.++..+++++|
T Consensus 303 ~~-~~~l~~L~~L~L~~n 319 (466)
T 1o6v_A 303 SP-ISNLKNLTYLTLYFN 319 (466)
T ss_dssp GG-GGGCTTCSEEECCSS
T ss_pred hh-hcCCCCCCEEECcCC
Confidence 33 444444444555444
No 382
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.83 E-value=4.8e-09 Score=105.35 Aligned_cols=74 Identities=23% Similarity=0.286 Sum_probs=65.6
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|+|++ +| ++.+++|+.|+|++|++++ + .++++++|+.|+|++|++++ +| +..+++|+.|++++|++++
T Consensus 177 ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~-~--~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~ 247 (457)
T 3bz5_A 177 CSFNKITE-LD--VSQNKLLNRLNCDTNNITK-L--DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTE 247 (457)
T ss_dssp CCSSCCCC-CC--CTTCTTCCEEECCSSCCSC-C--CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC
T ss_pred CCCCccce-ec--cccCCCCCEEECcCCcCCe-e--ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCC
Confidence 57899995 66 8899999999999999995 4 48999999999999999996 77 8899999999999999998
Q ss_pred CCC
Q 012213 81 EIP 83 (468)
Q Consensus 81 ~~p 83 (468)
.++
T Consensus 248 ~~~ 250 (457)
T 3bz5_A 248 LDV 250 (457)
T ss_dssp CCC
T ss_pred cCH
Confidence 765
No 383
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.82 E-value=6.1e-10 Score=108.40 Aligned_cols=100 Identities=20% Similarity=0.093 Sum_probs=84.2
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCC----ccccccc-cccEeeccCCcccccCCcccccc-----ccccc
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIP----VQITQIH-ILNYLNVSWNQLNASLPKEMGNM-----KSLTS 70 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p----~~~~~l~-~L~~l~ls~N~l~g~~p~~~~~l-----~~L~~ 70 (468)
|++|+++|.+|..+....+|++|||++|++++.-+ ..+.+++ +|+.|+|++|.+++..+..+..+ ++|+.
T Consensus 5 ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~ 84 (362)
T 3goz_A 5 LTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTS 84 (362)
T ss_dssp CCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCE
T ss_pred cccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccE
Confidence 68899999999888888889999999999996555 6788888 89999999999998777777776 89999
Q ss_pred ccccCcccCCCCCC-----cccc-cccCcccccCCC
Q 012213 71 ADFSHNNFSGEIPE-----FGQY-SFFNSTSFTGNP 100 (468)
Q Consensus 71 l~ls~N~l~~~~p~-----~~~~-~~~~~~~~~~n~ 100 (468)
|+|++|++++..+. +..+ ..+..+++++|.
T Consensus 85 L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~ 120 (362)
T 3goz_A 85 LNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWND 120 (362)
T ss_dssp EECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSC
T ss_pred EECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCc
Confidence 99999999987764 3333 678889998885
No 384
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.81 E-value=6e-09 Score=100.57 Aligned_cols=95 Identities=20% Similarity=0.327 Sum_probs=79.5
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
+++|.++ .+| .+..+++|++|+|++|+++ .+|. +.++++|++|+|++|.++. +| .+..+++|+.|++++|++++
T Consensus 51 l~~~~i~-~~~-~~~~~~~L~~L~l~~n~i~-~~~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~l~~n~i~~ 124 (347)
T 4fmz_A 51 VAGEKVA-SIQ-GIEYLTNLEYLNLNGNQIT-DISP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELYLNEDNISD 124 (347)
T ss_dssp CCSSCCC-CCT-TGGGCTTCCEEECCSSCCC-CCGG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECTTSCCCC
T ss_pred EeCCccc-cch-hhhhcCCccEEEccCCccc-cchh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEECcCCcccC
Confidence 4678887 666 4889999999999999999 5665 9999999999999999984 65 68999999999999999986
Q ss_pred CCCCcccccccCcccccCCCCC
Q 012213 81 EIPEFGQYSFFNSTSFTGNPHL 102 (468)
Q Consensus 81 ~~p~~~~~~~~~~~~~~~n~~l 102 (468)
..+ +..+.++..+++++|...
T Consensus 125 ~~~-~~~l~~L~~L~l~~n~~~ 145 (347)
T 4fmz_A 125 ISP-LANLTKMYSLNLGANHNL 145 (347)
T ss_dssp CGG-GTTCTTCCEEECTTCTTC
T ss_pred chh-hccCCceeEEECCCCCCc
Confidence 544 778888888999888544
No 385
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.77 E-value=7.6e-10 Score=106.40 Aligned_cols=99 Identities=14% Similarity=0.123 Sum_probs=78.8
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCccccc-CCccccccccccEeeccCCcccccCCcccccccccccccccCc-cc
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGP-IPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHN-NF 78 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~-~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N-~l 78 (468)
|++|.+++.+| .+.++++|++|+|++|++++. +|..+.++++|+.|+|++|.+++.+|..++.+++|+.|++++| .+
T Consensus 77 l~~n~l~~~~~-~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l 155 (336)
T 2ast_B 77 CPRSFMDQPLA-EHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGF 155 (336)
T ss_dssp CTTCEECSCCC-SCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSC
T ss_pred cCCccccccch-hhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCC
Confidence 46788886555 466788899999999988866 8888888899999999999888888888888888999999988 67
Q ss_pred CCC-CCC-cccccccCcccccCCC
Q 012213 79 SGE-IPE-FGQYSFFNSTSFTGNP 100 (468)
Q Consensus 79 ~~~-~p~-~~~~~~~~~~~~~~n~ 100 (468)
++. +|. +..+.++..+++++|.
T Consensus 156 ~~~~l~~~~~~~~~L~~L~l~~~~ 179 (336)
T 2ast_B 156 SEFALQTLLSSCSRLDELNLSWCF 179 (336)
T ss_dssp CHHHHHHHHHHCTTCCEEECCCCT
T ss_pred CHHHHHHHHhcCCCCCEEcCCCCC
Confidence 752 443 5667778888888773
No 386
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.77 E-value=5.2e-10 Score=109.89 Aligned_cols=100 Identities=16% Similarity=0.202 Sum_probs=69.1
Q ss_pred CCCCccc-ccCC---cccccCCCCCEEEccCCccc--c---cCCccccccccccEeeccCCccc----ccCCcccccccc
Q 012213 1 MSRNNFS-GIIP---VEIGHCLLLTYLDLSQNHLS--G---PIPVQITQIHILNYLNVSWNQLN----ASLPKEMGNMKS 67 (468)
Q Consensus 1 l~~N~l~-g~~p---~~~~~l~~L~~L~l~~n~l~--g---~~p~~~~~l~~L~~l~ls~N~l~----g~~p~~~~~l~~ 67 (468)
|++|+|+ +.+| ..+..+++|++|+|++|+++ | .+|..+.++++|+.|+|++|.++ +.+|..+..+++
T Consensus 166 L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~ 245 (386)
T 2ca6_A 166 CGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPN 245 (386)
T ss_dssp CCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTT
T ss_pred CCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCC
Confidence 5677776 4555 46667777888888888777 3 34447777778888888888875 567777777777
Q ss_pred cccccccCcccCCC----CCC-c--ccccccCcccccCCC
Q 012213 68 LTSADFSHNNFSGE----IPE-F--GQYSFFNSTSFTGNP 100 (468)
Q Consensus 68 L~~l~ls~N~l~~~----~p~-~--~~~~~~~~~~~~~n~ 100 (468)
|+.|+|++|++++. +|. + +.+.++..+++++|.
T Consensus 246 L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~ 285 (386)
T 2ca6_A 246 LRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNE 285 (386)
T ss_dssp CCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSC
T ss_pred cCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCc
Confidence 88888888877754 332 2 335667777777764
No 387
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.75 E-value=2.2e-09 Score=98.78 Aligned_cols=68 Identities=24% Similarity=0.283 Sum_probs=56.0
Q ss_pred ccCCCCCEEEccCCcccc--cCCccccccccccEeeccCCcccccCCccccccc--ccccccccCcccCCCCCC
Q 012213 15 GHCLLLTYLDLSQNHLSG--PIPVQITQIHILNYLNVSWNQLNASLPKEMGNMK--SLTSADFSHNNFSGEIPE 84 (468)
Q Consensus 15 ~~l~~L~~L~l~~n~l~g--~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~--~L~~l~ls~N~l~~~~p~ 84 (468)
.++++|+.|+||+|+|++ .+|..+..+++|+.|+|++|+|++ + ..+..++ +|+.|+|++|.+++.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~-~-~~l~~l~~l~L~~L~L~~Npl~~~~~~ 238 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKS-E-RELDKIKGLKLEELWLDGNSLCDTFRD 238 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCS-G-GGGGGGTTSCCSEEECTTSTTGGGCSS
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCC-c-hhhhhcccCCcceEEccCCcCccccCc
Confidence 568899999999999997 677788899999999999999985 3 3455555 889999999999887773
No 388
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.75 E-value=4.3e-10 Score=108.13 Aligned_cols=100 Identities=19% Similarity=0.236 Sum_probs=86.9
Q ss_pred CCCCccccc-CCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCC-cccc-cCCcccccccccccccccCc-
Q 012213 1 MSRNNFSGI-IPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWN-QLNA-SLPKEMGNMKSLTSADFSHN- 76 (468)
Q Consensus 1 l~~N~l~g~-~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N-~l~g-~~p~~~~~l~~L~~l~ls~N- 76 (468)
|++|++++. +|..+.++++|++|+|++|++++.+|..++++++|++|+|++| .+++ .+|..+..+++|+.|++++|
T Consensus 100 L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~ 179 (336)
T 2ast_B 100 LSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCF 179 (336)
T ss_dssp CTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCT
T ss_pred ccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCC
Confidence 578889876 8889999999999999999999999999999999999999999 7886 37878899999999999999
Q ss_pred ccCCC-CCC-ccccc-ccCcccccCCC
Q 012213 77 NFSGE-IPE-FGQYS-FFNSTSFTGNP 100 (468)
Q Consensus 77 ~l~~~-~p~-~~~~~-~~~~~~~~~n~ 100 (468)
.+++. ++. +..++ ++..+++++|.
T Consensus 180 ~l~~~~~~~~~~~l~~~L~~L~l~~~~ 206 (336)
T 2ast_B 180 DFTEKHVQVAVAHVSETITQLNLSGYR 206 (336)
T ss_dssp TCCHHHHHHHHHHSCTTCCEEECCSCG
T ss_pred CcChHHHHHHHHhcccCCCEEEeCCCc
Confidence 89864 443 66777 88889888774
No 389
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.74 E-value=6.9e-09 Score=100.45 Aligned_cols=96 Identities=16% Similarity=0.123 Sum_probs=78.6
Q ss_pred CCCcccccCCcccccCCCCCEEEccCCcccccCCc-cccccccccEeeccCCcccccCCc-cccccccccc-ccccCccc
Q 012213 2 SRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPV-QITQIHILNYLNVSWNQLNASLPK-EMGNMKSLTS-ADFSHNNF 78 (468)
Q Consensus 2 ~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~-~~~~l~~L~~l~ls~N~l~g~~p~-~~~~l~~L~~-l~ls~N~l 78 (468)
++|+|+ .||..+ .++|+.|+|++|+|+ .||. .|.+|++|++|+|++|.+.+.+|. .|.++++|.. +.+++|+|
T Consensus 17 ~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l 92 (350)
T 4ay9_X 17 QESKVT-EIPSDL--PRNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNL 92 (350)
T ss_dssp ESTTCC-SCCTTC--CTTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTC
T ss_pred cCCCCC-ccCcCc--CCCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcc
Confidence 468888 889877 468999999999999 6765 689999999999999998877875 4678888765 66778999
Q ss_pred CCCCCC-cccccccCcccccCCCC
Q 012213 79 SGEIPE-FGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 79 ~~~~p~-~~~~~~~~~~~~~~n~~ 101 (468)
++..|. +..+.++..+++++|..
T Consensus 93 ~~l~~~~f~~l~~L~~L~l~~n~l 116 (350)
T 4ay9_X 93 LYINPEAFQNLPNLQYLLISNTGI 116 (350)
T ss_dssp CEECTTSBCCCTTCCEEEEEEECC
T ss_pred cccCchhhhhcccccccccccccc
Confidence 977774 78888899999988854
No 390
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.74 E-value=5.8e-09 Score=100.94 Aligned_cols=98 Identities=14% Similarity=0.007 Sum_probs=77.6
Q ss_pred CCCCcccccCC-cccccCCCCCEEEccCCcccccCCc-cccccccccE-eeccCCcccccCCcccccccccccccccCcc
Q 012213 1 MSRNNFSGIIP-VEIGHCLLLTYLDLSQNHLSGPIPV-QITQIHILNY-LNVSWNQLNASLPKEMGNMKSLTSADFSHNN 77 (468)
Q Consensus 1 l~~N~l~g~~p-~~~~~l~~L~~L~l~~n~l~g~~p~-~~~~l~~L~~-l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~ 77 (468)
|++|+|+ .|| ..|.+|++|++|+|++|++.+.+|. .|.+|++|.. ++++.|++++..|..|..+++|+.|++++|+
T Consensus 37 Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~ 115 (350)
T 4ay9_X 37 FVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTG 115 (350)
T ss_dssp EESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEEC
T ss_pred ccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccc
Confidence 5789999 565 5799999999999999999878876 5789998875 6778899997667789999999999999999
Q ss_pred cCCCCCC-cccccccCcccccCC
Q 012213 78 FSGEIPE-FGQYSFFNSTSFTGN 99 (468)
Q Consensus 78 l~~~~p~-~~~~~~~~~~~~~~n 99 (468)
+++.++. +.....+..+.+.++
T Consensus 116 l~~~~~~~~~~~~~l~~l~l~~~ 138 (350)
T 4ay9_X 116 IKHLPDVHKIHSLQKVLLDIQDN 138 (350)
T ss_dssp CSSCCCCTTCCBSSCEEEEEESC
T ss_pred cccCCchhhcccchhhhhhhccc
Confidence 9976653 333334444555544
No 391
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.73 E-value=1.4e-08 Score=105.40 Aligned_cols=74 Identities=30% Similarity=0.262 Sum_probs=33.8
Q ss_pred CCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCCCCCCcccccccCcccccC
Q 012213 19 LLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSGEIPEFGQYSFFNSTSFTG 98 (468)
Q Consensus 19 ~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~ 98 (468)
+|+.|+|++|+|+ .+| ..+++|+.|+|++|.|+ .+|. .+++|+.|+|++|+|+..++.+..+.++..+++++
T Consensus 222 ~L~~L~Ls~N~L~-~lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~~lp~~l~~l~~L~~L~L~~ 293 (622)
T 3g06_A 222 GLKELIVSGNRLT-SLP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLTRLPESLIHLSSETTVNLEG 293 (622)
T ss_dssp TCCEEECCSSCCS-CCC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCCSCCGGGGGSCTTCEEECCS
T ss_pred CCCEEEccCCccC-cCC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCCcCCHHHhhccccCEEEecC
Confidence 3444444444444 233 22344444444444444 3443 33445555555555552222344555555555555
Q ss_pred CC
Q 012213 99 NP 100 (468)
Q Consensus 99 n~ 100 (468)
|+
T Consensus 294 N~ 295 (622)
T 3g06_A 294 NP 295 (622)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 392
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.71 E-value=1.4e-09 Score=106.87 Aligned_cols=100 Identities=13% Similarity=0.208 Sum_probs=70.9
Q ss_pred CCCCcccc----cCCcccccC---------CCCCEEEccCCccc-ccCC---ccccccccccEeeccCCccc--c---cC
Q 012213 1 MSRNNFSG----IIPVEIGHC---------LLLTYLDLSQNHLS-GPIP---VQITQIHILNYLNVSWNQLN--A---SL 58 (468)
Q Consensus 1 l~~N~l~g----~~p~~~~~l---------~~L~~L~l~~n~l~-g~~p---~~~~~l~~L~~l~ls~N~l~--g---~~ 58 (468)
|++|+|++ .++..+..+ ++|++|+|++|+++ +.+| ..+.++++|+.|+|++|.++ | .+
T Consensus 129 L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~ 208 (386)
T 2ca6_A 129 LHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLL 208 (386)
T ss_dssp CCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHH
T ss_pred CcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHH
Confidence 46677752 345556666 78888888888887 4566 46777888888888888887 3 34
Q ss_pred CcccccccccccccccCcccC----CCCCC-cccccccCcccccCCC
Q 012213 59 PKEMGNMKSLTSADFSHNNFS----GEIPE-FGQYSFFNSTSFTGNP 100 (468)
Q Consensus 59 p~~~~~l~~L~~l~ls~N~l~----~~~p~-~~~~~~~~~~~~~~n~ 100 (468)
|..+..+++|+.|+|++|.++ +.+|. +..++++..+++++|.
T Consensus 209 ~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~ 255 (386)
T 2ca6_A 209 LEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCL 255 (386)
T ss_dssp HTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCC
T ss_pred HHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCC
Confidence 557778888888888888875 44553 5666777778887775
No 393
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.65 E-value=1.1e-07 Score=89.05 Aligned_cols=140 Identities=21% Similarity=0.174 Sum_probs=92.7
Q ss_pred CcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCC---CccceeEEEecCCeeEEEEecc
Q 012213 186 DNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHR---NIVRLKAFCSNKETNLLVYEYM 262 (468)
Q Consensus 186 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~~ 262 (468)
..+.|+.|.++.||++...+|+.++||+..... ......+..|++.|+.+++. .+.+++++. ..++||||+
T Consensus 19 ~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~--~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l 92 (288)
T 3d1u_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDDA--PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWV 92 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTTC--CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECC
T ss_pred ceeeeCCcchhheEEEEeCCCCeEEEEecCCCC--cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEec
Confidence 356799999999999998889999999864322 22235689999999999765 577777764 369999999
Q ss_pred CCCChhh-----------hcccCCCC-------------------CCCHHHHHH--------------------HHHHHH
Q 012213 263 PNGSLGE-----------VLHGKRGS-------------------FLKWEMRLK--------------------IAIEAA 292 (468)
Q Consensus 263 ~~gsL~~-----------~l~~~~~~-------------------~l~~~~~~~--------------------i~~~ia 292 (468)
+++++.. .||..... .-+|..... ....+.
T Consensus 93 ~g~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~ 172 (288)
T 3d1u_A 93 DERPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVE 172 (288)
T ss_dssp CCCCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHH
T ss_pred ccCCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 9987532 12321110 123433210 011112
Q ss_pred HHHHHhh----hcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q 012213 293 KGLSYLH----HDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAK 333 (468)
Q Consensus 293 ~~l~~LH----~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~ 333 (468)
+.+..+. ....+.++|+|+.+.||+++.+ .+.|+|| .+.
T Consensus 173 ~l~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~~-~~~~iD~-~~~ 215 (288)
T 3d1u_A 173 KVLDALDHLAGDPEPPARIHGDLWNGNVLWQDD-GAVVIDP-AAH 215 (288)
T ss_dssp HHHHTHHHHTCSCCCCEEECSCCSGGGEEEETT-EEEECSC-CCE
T ss_pred HHHHHHHHHhcCCCCCcceECCCCcCcEEEeCC-CeEEEcC-CcC
Confidence 2233332 2235679999999999999884 5889999 554
No 394
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.65 E-value=3.8e-09 Score=102.73 Aligned_cols=101 Identities=27% Similarity=0.266 Sum_probs=81.5
Q ss_pred CCCCcccccCC----cccccCC-CCCEEEccCCcccccCCcccccc-----ccccEeeccCCcccccCCcccccc-----
Q 012213 1 MSRNNFSGIIP----VEIGHCL-LLTYLDLSQNHLSGPIPVQITQI-----HILNYLNVSWNQLNASLPKEMGNM----- 65 (468)
Q Consensus 1 l~~N~l~g~~p----~~~~~l~-~L~~L~l~~n~l~g~~p~~~~~l-----~~L~~l~ls~N~l~g~~p~~~~~l----- 65 (468)
|++|+|++..+ ..+.+++ +|++|+|++|++++..+..+..+ ++|++|+|++|.+++..+..++..
T Consensus 29 Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~ 108 (362)
T 3goz_A 29 LSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIP 108 (362)
T ss_dssp CTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSC
T ss_pred ccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCC
Confidence 68899986555 6778888 89999999999998778888886 999999999999997666654443
Q ss_pred cccccccccCcccCCCCCC-cc----c-ccccCcccccCCCC
Q 012213 66 KSLTSADFSHNNFSGEIPE-FG----Q-YSFFNSTSFTGNPH 101 (468)
Q Consensus 66 ~~L~~l~ls~N~l~~~~p~-~~----~-~~~~~~~~~~~n~~ 101 (468)
++|+.|+|++|++++..+. +. . ...+..+++++|..
T Consensus 109 ~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l 150 (362)
T 3goz_A 109 FTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDL 150 (362)
T ss_dssp TTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCG
T ss_pred CCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcC
Confidence 8999999999999876653 22 2 24788888888743
No 395
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.64 E-value=1.3e-07 Score=90.21 Aligned_cols=136 Identities=18% Similarity=0.145 Sum_probs=98.4
Q ss_pred cCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCC----CCccceeEEEecCCeeEEEE
Q 012213 184 VKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRH----RNIVRLKAFCSNKETNLLVY 259 (468)
Q Consensus 184 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~l~~~~~~~~~~~lv~ 259 (468)
+...+.++.|....||+. |+.+++|..... .....+..|.+.+..+.+ ..+.+++++ +..++||
T Consensus 39 i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~----~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvm 106 (320)
T 3r70_A 39 INELRYLSSGDDSDTFLC----NEQYVVKVPKRD----SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIM 106 (320)
T ss_dssp CSCEEEEEECSSEEEEEE----TTTEEEEEESSH----HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEE
T ss_pred eEEEEeCCCCCCceEEEE----CCEEEEEeCCcH----HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEE
Confidence 345678999999999998 677889875321 112458889988877765 223445554 5678999
Q ss_pred eccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCC------------------------------------
Q 012213 260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCS------------------------------------ 303 (468)
Q Consensus 260 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~------------------------------------ 303 (468)
||++|.++.+... ..++..++..++.++++.++.||....
T Consensus 107 e~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (320)
T 3r70_A 107 KYIKGERITYEQY----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLT 182 (320)
T ss_dssp ECCCCBCCCHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred eecCCcccccccc----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccc
Confidence 9999988864321 124566677788888888888884321
Q ss_pred ------------------------CCeeecCCCCCcEEEcCCCceEEeeccccccc
Q 012213 304 ------------------------PLIIHRDVKSNNILLNSDFEAHVADFGLAKYL 335 (468)
Q Consensus 304 ------------------------~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~ 335 (468)
+.++|+|++|.||+++.+..+.|+||+.+..-
T Consensus 183 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 183 DEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred ccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 23599999999999999666799999998653
No 396
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.63 E-value=3.8e-08 Score=102.14 Aligned_cols=86 Identities=24% Similarity=0.214 Sum_probs=62.3
Q ss_pred CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213 1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG 80 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~ 80 (468)
|++|.|+ .+|..+. ++|+.|+|++|+|+ .+|. .+++|++|+|++|+|+ .+|. .+++|+.|++++|++++
T Consensus 47 ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~ 115 (622)
T 3g06_A 47 VGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH 115 (622)
T ss_dssp CCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC
T ss_pred ecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC
Confidence 5678887 7887765 68888888888888 6776 5678888888888887 5776 56777788888887776
Q ss_pred CCCCcccccccCcccccCCC
Q 012213 81 EIPEFGQYSFFNSTSFTGNP 100 (468)
Q Consensus 81 ~~p~~~~~~~~~~~~~~~n~ 100 (468)
.++ .+.++..+++++|.
T Consensus 116 l~~---~l~~L~~L~L~~N~ 132 (622)
T 3g06_A 116 LPA---LPSGLCKLWIFGNQ 132 (622)
T ss_dssp CCC---CCTTCCEEECCSSC
T ss_pred CCC---CCCCcCEEECCCCC
Confidence 433 34555666666664
No 397
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.55 E-value=2.9e-07 Score=85.38 Aligned_cols=135 Identities=19% Similarity=0.196 Sum_probs=95.6
Q ss_pred eEcccCCc-ceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCC-CCCccceeEEEecCCeeEEEEeccCCC
Q 012213 189 VIGRGGAG-VVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIR-HRNIVRLKAFCSNKETNLLVYEYMPNG 265 (468)
Q Consensus 189 ~ig~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~g 265 (468)
.+..|..| .||+.... ++..++||+-... ....+.+|...|+.+. +--+.++++++.+.+..++|||++++.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~-----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~ 105 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS-----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGK 105 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH-----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC-----CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCc
Confidence 45556665 58988764 4667899975422 2356788998887774 334677899999999999999999998
Q ss_pred ChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcC-------------------------------------------
Q 012213 266 SLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDC------------------------------------------- 302 (468)
Q Consensus 266 sL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~------------------------------------------- 302 (468)
++.+..... ......+..+++..|..||...
T Consensus 106 ~~~~~~~~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 106 TAFQVLEEY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp EHHHHHHHC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred cccccccCC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 877654321 1223345566666666666410
Q ss_pred ------------CCCeeecCCCCCcEEEcCCCceEEeecccccc
Q 012213 303 ------------SPLIIHRDVKSNNILLNSDFEAHVADFGLAKY 334 (468)
Q Consensus 303 ------------~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 334 (468)
...++|+|+.+.||+++.++.+-|+||+.+..
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 12389999999999999887778999997753
No 398
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.45 E-value=1.3e-06 Score=82.72 Aligned_cols=136 Identities=19% Similarity=0.190 Sum_probs=93.3
Q ss_pred cceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCC---CccceeEEEe-cCCeeEEEEecc
Q 012213 187 NNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHR---NIVRLKAFCS-NKETNLLVYEYM 262 (468)
Q Consensus 187 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~-~~~~~~lv~e~~ 262 (468)
.+.++.|....||+. |..++||.... ......+..|.+++..+.+. .+.+++.++. ..+..++||||+
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~~----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i 95 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPKS----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKV 95 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECC
T ss_pred eeecCCCcceeEEEE----CCEEEEEecCC----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEecc
Confidence 456888888899988 56788887421 12235688999999988652 3556677764 445578999999
Q ss_pred CCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhc-----------------------------------------
Q 012213 263 PNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHD----------------------------------------- 301 (468)
Q Consensus 263 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~----------------------------------------- 301 (468)
+|..+.+.... .++..++..++.++++.|+.||..
T Consensus 96 ~G~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~ 171 (306)
T 3tdw_A 96 QGQILGEDGMA----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDY 171 (306)
T ss_dssp CSEECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHH
T ss_pred CCeECchhhhh----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence 99887653211 134444555555555555555532
Q ss_pred ----------------CCCCeeecCCCCCcEEEcC---CCc-eEEeecccccc
Q 012213 302 ----------------CSPLIIHRDVKSNNILLNS---DFE-AHVADFGLAKY 334 (468)
Q Consensus 302 ----------------~~~~ivH~dlk~~Nill~~---~~~-~kl~Dfgla~~ 334 (468)
....++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 172 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 172 LTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2334799999999999987 455 48999998764
No 399
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.43 E-value=1.2e-07 Score=87.06 Aligned_cols=70 Identities=21% Similarity=0.208 Sum_probs=59.3
Q ss_pred CCCCcccc--cCCcccccCCCCCEEEccCCcccccCCccccccc--cccEeeccCCcccccCCc-------ccccccccc
Q 012213 1 MSRNNFSG--IIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIH--ILNYLNVSWNQLNASLPK-------EMGNMKSLT 69 (468)
Q Consensus 1 l~~N~l~g--~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~--~L~~l~ls~N~l~g~~p~-------~~~~l~~L~ 69 (468)
|++|+|++ .+|..++.+++|+.|+|++|+|++. .++..+. +|+.|+|++|.+++.+|. .+..+++|+
T Consensus 177 Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~il~~~P~L~ 254 (267)
T 3rw6_A 177 LSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAIRERFPKLL 254 (267)
T ss_dssp CTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHHHHHCTTCC
T ss_pred CCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHHHHHCcccC
Confidence 78999998 6678888999999999999999954 4566666 999999999999998874 367788888
Q ss_pred ccc
Q 012213 70 SAD 72 (468)
Q Consensus 70 ~l~ 72 (468)
.||
T Consensus 255 ~LD 257 (267)
T 3rw6_A 255 RLD 257 (267)
T ss_dssp EES
T ss_pred eEC
Confidence 776
No 400
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.37 E-value=1.2e-06 Score=84.66 Aligned_cols=83 Identities=6% Similarity=0.040 Sum_probs=55.9
Q ss_pred cceE-cccCCcceEEEEcC-------CCcEEEEEEecccCC-CCCchhHHHHHHHHHhCCC-C--CCccceeEEEecC--
Q 012213 187 NNVI-GRGGAGVVYRGVTP-------NGEQVAVKKLLGITK-GSSHDNGLSAEIRTLGKIR-H--RNIVRLKAFCSNK-- 252 (468)
Q Consensus 187 ~~~i-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~-h--~niv~l~~~~~~~-- 252 (468)
.+.| +.|....+|+.... +++.+++|....... .......+..|+.+++.+. + -.+.+++.++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~ 104 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDV 104 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTT
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCc
Confidence 3567 88888999998764 267788887543220 0001134778888888774 2 3567788887655
Q ss_pred -CeeEEEEeccCCCChhh
Q 012213 253 -ETNLLVYEYMPNGSLGE 269 (468)
Q Consensus 253 -~~~~lv~e~~~~gsL~~ 269 (468)
+..++||||++|..+.+
T Consensus 105 ~g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 105 LGTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp TSSCEEEEECCCCBCCCB
T ss_pred cCCceEEEEecCCCChhh
Confidence 34689999999877654
No 401
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.35 E-value=1.9e-06 Score=83.48 Aligned_cols=140 Identities=12% Similarity=0.130 Sum_probs=88.1
Q ss_pred cceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCC--ccceeEEEecC-CeeEEEEeccC
Q 012213 187 NNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRN--IVRLKAFCSNK-ETNLLVYEYMP 263 (468)
Q Consensus 187 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~-~~~~lv~e~~~ 263 (468)
.+.++.|....+|+... +++.+++|.... . ..+..|...+..+.... +.++++++... +..++||||++
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~-----~--~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~ 117 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSC-----A--DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQ 117 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESC-----C--HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCC
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCc-----h--hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecC
Confidence 45689999999999875 578899997632 1 35888888888876433 55677777654 56799999999
Q ss_pred CCChhhh------------------cccCCCC---------------CCCHHHH---------------------HHHHH
Q 012213 264 NGSLGEV------------------LHGKRGS---------------FLKWEMR---------------------LKIAI 289 (468)
Q Consensus 264 ~gsL~~~------------------l~~~~~~---------------~l~~~~~---------------------~~i~~ 289 (468)
|.++.+. ||..... .-.|... .....
T Consensus 118 G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 197 (362)
T 3ovc_A 118 GVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASVAQ 197 (362)
T ss_dssp SEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccchH
Confidence 8665421 1110000 0011111 01111
Q ss_pred HHHHHHHHhhhc-CCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q 012213 290 EAAKGLSYLHHD-CSPLIIHRDVKSNNILLNSDFEAHVADFGLAKY 334 (468)
Q Consensus 290 ~ia~~l~~LH~~-~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 334 (468)
.+...+.++... ..+.++|+|+.+.||+++++..+.|+||+.+..
T Consensus 198 ~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 198 ALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 112222222211 124589999999999998877788999998865
No 402
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.31 E-value=2.5e-08 Score=100.09 Aligned_cols=100 Identities=14% Similarity=0.051 Sum_probs=71.6
Q ss_pred CCCCccccc----CCcccccCCCCCEEEccCCcccccCCcccccc-----ccccEeeccCCccccc----CCcccccccc
Q 012213 1 MSRNNFSGI----IPVEIGHCLLLTYLDLSQNHLSGPIPVQITQI-----HILNYLNVSWNQLNAS----LPKEMGNMKS 67 (468)
Q Consensus 1 l~~N~l~g~----~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l-----~~L~~l~ls~N~l~g~----~p~~~~~l~~ 67 (468)
|++|+|++. +|..+.++++|++|+|++|++++.-+..+... ++|+.|+|++|.+++. +|..+..+++
T Consensus 263 L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~ 342 (461)
T 1z7x_W 263 IWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRF 342 (461)
T ss_dssp CTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSS
T ss_pred CcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCC
Confidence 567888754 67778888899999999998886555555443 6888888888888754 5666777788
Q ss_pred cccccccCcccCCCCCC-ccc-----ccccCcccccCCC
Q 012213 68 LTSADFSHNNFSGEIPE-FGQ-----YSFFNSTSFTGNP 100 (468)
Q Consensus 68 L~~l~ls~N~l~~~~p~-~~~-----~~~~~~~~~~~n~ 100 (468)
|+.|++++|++++..+. +.. ...+..+++++|.
T Consensus 343 L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~ 381 (461)
T 1z7x_W 343 LLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCD 381 (461)
T ss_dssp CCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSC
T ss_pred ccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCC
Confidence 88888888887754332 221 4467777777774
No 403
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.19 E-value=1.9e-07 Score=93.64 Aligned_cols=101 Identities=13% Similarity=0.073 Sum_probs=78.1
Q ss_pred CCCCcccccCCcccccC-----CCCCEEEccCCccccc----CCccccccccccEeeccCCcccccCCccccc-----cc
Q 012213 1 MSRNNFSGIIPVEIGHC-----LLLTYLDLSQNHLSGP----IPVQITQIHILNYLNVSWNQLNASLPKEMGN-----MK 66 (468)
Q Consensus 1 l~~N~l~g~~p~~~~~l-----~~L~~L~l~~n~l~g~----~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~-----l~ 66 (468)
|++|+|++..+..+... ++|+.|+|++|++++. +|..+.++++|+.|||++|.+++..+..+.. .+
T Consensus 291 Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~ 370 (461)
T 1z7x_W 291 LAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGS 370 (461)
T ss_dssp CTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTC
T ss_pred CCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCC
Confidence 57788876555455433 6899999999999865 6777888899999999999998655555543 67
Q ss_pred ccccccccCcccCC----CCCC-cccccccCcccccCCCC
Q 012213 67 SLTSADFSHNNFSG----EIPE-FGQYSFFNSTSFTGNPH 101 (468)
Q Consensus 67 ~L~~l~ls~N~l~~----~~p~-~~~~~~~~~~~~~~n~~ 101 (468)
+|+.|++++|++++ .+|. +..++.+..+++++|+.
T Consensus 371 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i 410 (461)
T 1z7x_W 371 VLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCL 410 (461)
T ss_dssp CCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSC
T ss_pred ceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCC
Confidence 89999999999985 5553 56678888899998853
No 404
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.14 E-value=1.6e-07 Score=91.33 Aligned_cols=84 Identities=14% Similarity=0.092 Sum_probs=44.1
Q ss_pred CCCCCEEEccCCcccc----cCCccccccccccEeeccCCcccc----cCCcccccccccccccccCcccCCCCC-----
Q 012213 17 CLLLTYLDLSQNHLSG----PIPVQITQIHILNYLNVSWNQLNA----SLPKEMGNMKSLTSADFSHNNFSGEIP----- 83 (468)
Q Consensus 17 l~~L~~L~l~~n~l~g----~~p~~~~~l~~L~~l~ls~N~l~g----~~p~~~~~l~~L~~l~ls~N~l~~~~p----- 83 (468)
.++|+.|+|++|+|+. .++..+..+++|++|||++|.|+. .++..+..+++|+.|+|++|.|+..-.
T Consensus 154 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~ 233 (372)
T 3un9_A 154 QCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALAR 233 (372)
T ss_dssp TCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHH
T ss_pred CCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHH
Confidence 4556666666666652 234444556666666666666652 123445555566666666666653211
Q ss_pred CcccccccCcccccCCC
Q 012213 84 EFGQYSFFNSTSFTGNP 100 (468)
Q Consensus 84 ~~~~~~~~~~~~~~~n~ 100 (468)
.+.....+..+++++|+
T Consensus 234 ~L~~~~~L~~L~Ls~N~ 250 (372)
T 3un9_A 234 AAREHPSLELLHLYFNE 250 (372)
T ss_dssp HHHHCSSCCEEECTTSS
T ss_pred HHHhCCCCCEEeccCCC
Confidence 01223455556666553
No 405
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.06 E-value=1.5e-05 Score=78.27 Aligned_cols=77 Identities=17% Similarity=0.171 Sum_probs=49.3
Q ss_pred cceEcccCCcceEEEEcC-CCcEEEEEEecccCC--C---CCchhHHHHHHHHHhCCCC--CC-ccceeEEEecCCeeEE
Q 012213 187 NNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITK--G---SSHDNGLSAEIRTLGKIRH--RN-IVRLKAFCSNKETNLL 257 (468)
Q Consensus 187 ~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~---~~~~~~~~~e~~~l~~l~h--~n-iv~l~~~~~~~~~~~l 257 (468)
.+.||.|.++.||++... +++.++||....... . .....++..|.+.+..+.. +. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 457899999999999764 468899998653221 0 1123456778888876632 33 3355544 3455689
Q ss_pred EEeccCCC
Q 012213 258 VYEYMPNG 265 (468)
Q Consensus 258 v~e~~~~g 265 (468)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 406
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.06 E-value=2.3e-05 Score=75.01 Aligned_cols=139 Identities=17% Similarity=0.247 Sum_probs=78.5
Q ss_pred ceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCC-----CCCCcccee-E--EEecCCeeEEEE
Q 012213 188 NVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKI-----RHRNIVRLK-A--FCSNKETNLLVY 259 (468)
Q Consensus 188 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~l~-~--~~~~~~~~~lv~ 259 (468)
+.|+.|..+.||+....+| .+++|+.... ...+..|..++..+ ..|.++... | +....+..+++|
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~------~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~ 110 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP------EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVY 110 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC------HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC------HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEE
Confidence 4566677899999987554 5899987531 13344455554444 234444311 1 123456778999
Q ss_pred eccCCCChhh--------------hcccCC-----C-------CCCCHHHHH----------------------------
Q 012213 260 EYMPNGSLGE--------------VLHGKR-----G-------SFLKWEMRL---------------------------- 285 (468)
Q Consensus 260 e~~~~gsL~~--------------~l~~~~-----~-------~~l~~~~~~---------------------------- 285 (468)
+|++|..+.. .+|... . ....|....
T Consensus 111 ~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 190 (346)
T 2q83_A 111 DWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQ 190 (346)
T ss_dssp ECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHH
T ss_pred EeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHH
Confidence 9999865530 112100 0 012332211
Q ss_pred ---HHHHHHHHHHHHhhh----------cCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q 012213 286 ---KIAIEAAKGLSYLHH----------DCSPLIIHRDVKSNNILLNSDFEAHVADFGLAK 333 (468)
Q Consensus 286 ---~i~~~ia~~l~~LH~----------~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~ 333 (468)
.+...+..++.+|+. .....++|+|+++.||+++.++.+.|+||+.+.
T Consensus 191 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 191 EIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 111123445666653 124569999999999999888899999999764
No 407
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=98.05 E-value=4.5e-05 Score=71.94 Aligned_cols=137 Identities=16% Similarity=0.147 Sum_probs=91.9
Q ss_pred cceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCC---CCCccceeEEEecCCeeEEEEeccC
Q 012213 187 NNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIR---HRNIVRLKAFCSNKETNLLVYEYMP 263 (468)
Q Consensus 187 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~e~~~ 263 (468)
.+.|+.|....+|+... ++..++||+.... ....+..|.+.|+.+. ...+.++++++...+..++||||++
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~ 114 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS-----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALN 114 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG-----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc-----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEecc
Confidence 46789999999999987 4678899976432 2356888988888773 3568888998888888999999999
Q ss_pred CCChhh-----------hcccCCC-C-------------------CCCHHHHH---HHHH----------------HHHH
Q 012213 264 NGSLGE-----------VLHGKRG-S-------------------FLKWEMRL---KIAI----------------EAAK 293 (468)
Q Consensus 264 ~gsL~~-----------~l~~~~~-~-------------------~l~~~~~~---~i~~----------------~ia~ 293 (468)
+..+.. .||.... . .-+|.... ++.. .+..
T Consensus 115 G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~ 194 (312)
T 3jr1_A 115 KSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQ 194 (312)
T ss_dssp CCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHH
T ss_pred CCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHH
Confidence 876531 1232111 0 12455321 1111 1111
Q ss_pred H-HHHhhh-cCCCCeeecCCCCCcEEEcCCCceEEeecc
Q 012213 294 G-LSYLHH-DCSPLIIHRDVKSNNILLNSDFEAHVADFG 330 (468)
Q Consensus 294 ~-l~~LH~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 330 (468)
. ...|.. ...+.++|+|+.+.|++++.++ +.|.|+.
T Consensus 195 ~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 195 IVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 1 223421 2356799999999999999887 8899974
No 408
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.04 E-value=6.1e-07 Score=87.27 Aligned_cols=80 Identities=21% Similarity=0.272 Sum_probs=64.5
Q ss_pred CCCCcccc----cCCcccccCCCCCEEEccCCcccc----cCCccccccccccEeeccCCcccc----cCCccccccccc
Q 012213 1 MSRNNFSG----IIPVEIGHCLLLTYLDLSQNHLSG----PIPVQITQIHILNYLNVSWNQLNA----SLPKEMGNMKSL 68 (468)
Q Consensus 1 l~~N~l~g----~~p~~~~~l~~L~~L~l~~n~l~g----~~p~~~~~l~~L~~l~ls~N~l~g----~~p~~~~~l~~L 68 (468)
|++|+|+. .++..+..+++|++|||++|+|++ .++..+..+++|+.|||++|.|+. .++..+..+++|
T Consensus 162 Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L 241 (372)
T 3un9_A 162 LSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSL 241 (372)
T ss_dssp CCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSC
T ss_pred CCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCC
Confidence 57788864 245556788999999999999984 346678888999999999999984 344556677899
Q ss_pred ccccccCcccCC
Q 012213 69 TSADFSHNNFSG 80 (468)
Q Consensus 69 ~~l~ls~N~l~~ 80 (468)
+.|||++|.|+.
T Consensus 242 ~~L~Ls~N~i~~ 253 (372)
T 3un9_A 242 ELLHLYFNELSS 253 (372)
T ss_dssp CEEECTTSSCCH
T ss_pred CEEeccCCCCCH
Confidence 999999999874
No 409
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.99 E-value=3.2e-05 Score=72.25 Aligned_cols=77 Identities=17% Similarity=0.143 Sum_probs=54.9
Q ss_pred CCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCC---CccceeEEEecCCeeEEEEec
Q 012213 185 KDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHR---NIVRLKAFCSNKETNLLVYEY 261 (468)
Q Consensus 185 ~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~~~~~lv~e~ 261 (468)
.....+|.|..+.||+....||+.|+||+...... .....|..|.+.|+.+... -+.+++++. ..++||||
T Consensus 18 ~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~ 91 (288)
T 3f7w_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAP--ALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEW 91 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCC--CCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEEC
T ss_pred EEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCc--chhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEe
Confidence 34577899999999999999999999997643322 2224578899888877422 344555542 34789999
Q ss_pred cCCCCh
Q 012213 262 MPNGSL 267 (468)
Q Consensus 262 ~~~gsL 267 (468)
++++..
T Consensus 92 l~~~~~ 97 (288)
T 3f7w_A 92 VDERPP 97 (288)
T ss_dssp CCCCCC
T ss_pred ecccCC
Confidence 987654
No 410
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=97.82 E-value=1e-06 Score=91.29 Aligned_cols=88 Identities=13% Similarity=0.052 Sum_probs=54.0
Q ss_pred ccccCCCCCEEEccCC--cccccCCccccc-cccccEeeccCCcccc-cCCcccccccccccccccCcccCCC-CCC-cc
Q 012213 13 EIGHCLLLTYLDLSQN--HLSGPIPVQITQ-IHILNYLNVSWNQLNA-SLPKEMGNMKSLTSADFSHNNFSGE-IPE-FG 86 (468)
Q Consensus 13 ~~~~l~~L~~L~l~~n--~l~g~~p~~~~~-l~~L~~l~ls~N~l~g-~~p~~~~~l~~L~~l~ls~N~l~~~-~p~-~~ 86 (468)
.+.++++|+.|+|+.| .+++..+..++. +++|++|+|++|.+++ .+|..+..+++|+.|++++|.+++. ++. ..
T Consensus 431 ~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 510 (592)
T 3ogk_B 431 LLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVT 510 (592)
T ss_dssp HHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHH
T ss_pred HHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHH
Confidence 3555666666666532 355555555544 6777777777777764 3455556677777777777776543 232 23
Q ss_pred cccccCcccccCCC
Q 012213 87 QYSFFNSTSFTGNP 100 (468)
Q Consensus 87 ~~~~~~~~~~~~n~ 100 (468)
.++++..+++++|.
T Consensus 511 ~l~~L~~L~ls~n~ 524 (592)
T 3ogk_B 511 KLPSLRYLWVQGYR 524 (592)
T ss_dssp HCSSCCEEEEESCB
T ss_pred hcCccCeeECcCCc
Confidence 45667777777665
No 411
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.80 E-value=0.00011 Score=72.61 Aligned_cols=80 Identities=15% Similarity=0.087 Sum_probs=47.5
Q ss_pred CCCeeecCCCCCcEEEcCCCceEEeeccccccccccCCCccccccccCccccCccccCCC---CCCcchhhHHHHHHHHH
Q 012213 303 SPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTL---KVDEKSDVYSFGVVLLE 379 (468)
Q Consensus 303 ~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~s~G~~l~e 379 (468)
...++|||+++.||+++.++ ++|+||+.+..-... .........-...|.+|+..... ......++.+....+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~-~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMG-FDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECHH-HHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCchH-HHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 45599999999999998876 999999988753210 00000000012345666554311 11224555677778887
Q ss_pred HHhCC
Q 012213 380 LITGR 384 (468)
Q Consensus 380 lltg~ 384 (468)
.+++.
T Consensus 309 ~y~~~ 313 (420)
T 2pyw_A 309 LFNKR 313 (420)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77653
No 412
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=97.79 E-value=2.4e-05 Score=74.60 Aligned_cols=80 Identities=19% Similarity=0.221 Sum_probs=53.2
Q ss_pred CCCCCEEEccCCcccccCCc-cccccccccEeeccCCcccccCC-cccccccccc-cccccCcccCCCCC-CcccccccC
Q 012213 17 CLLLTYLDLSQNHLSGPIPV-QITQIHILNYLNVSWNQLNASLP-KEMGNMKSLT-SADFSHNNFSGEIP-EFGQYSFFN 92 (468)
Q Consensus 17 l~~L~~L~l~~n~l~g~~p~-~~~~l~~L~~l~ls~N~l~g~~p-~~~~~l~~L~-~l~ls~N~l~~~~p-~~~~~~~~~ 92 (468)
+++|+.|+|++|+++ .||. .|.+|.+|+.|+|++| ++ .|+ ..|.+|++|+ .+++++ +++...+ .|..+.+++
T Consensus 225 ~~~L~~l~L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~ 300 (329)
T 3sb4_A 225 MPNLVSLDISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LK-TIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLR 300 (329)
T ss_dssp CTTCCEEECTTBCCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEE
T ss_pred cCCCeEEECCCCCcc-eecHhhhhCCCCCCEEECCcc-cc-eehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCC
Confidence 677777777777777 5554 5777777777777777 65 344 3577777777 777777 5553322 366666677
Q ss_pred cccccCCC
Q 012213 93 STSFTGNP 100 (468)
Q Consensus 93 ~~~~~~n~ 100 (468)
.+.+.+|.
T Consensus 301 ~l~l~~n~ 308 (329)
T 3sb4_A 301 YVLATGDK 308 (329)
T ss_dssp EEEECSSC
T ss_pred EEEeCCCc
Confidence 77765553
No 413
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.77 E-value=2.2e-06 Score=74.61 Aligned_cols=88 Identities=13% Similarity=0.134 Sum_probs=51.0
Q ss_pred ccccCCCCCEEEccCC-ccccc----CCccccccccccEeeccCCcccc----cCCcccccccccccccccCcccCCC--
Q 012213 13 EIGHCLLLTYLDLSQN-HLSGP----IPVQITQIHILNYLNVSWNQLNA----SLPKEMGNMKSLTSADFSHNNFSGE-- 81 (468)
Q Consensus 13 ~~~~l~~L~~L~l~~n-~l~g~----~p~~~~~l~~L~~l~ls~N~l~g----~~p~~~~~l~~L~~l~ls~N~l~~~-- 81 (468)
.+...+.|++|+|++| +++.. +...+...++|++|+|++|.+.. .+...+...++|+.|+|++|+++..
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 3445667777777777 66532 33445566777777777777652 1333445556677777777776532
Q ss_pred --CC-CcccccccCcccc--cCCC
Q 012213 82 --IP-EFGQYSFFNSTSF--TGNP 100 (468)
Q Consensus 82 --~p-~~~~~~~~~~~~~--~~n~ 100 (468)
+. .+.....+..+++ ++|.
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~ 134 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQP 134 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSC
T ss_pred HHHHHHHHhCCCceEEEecCCCCC
Confidence 11 1233345666666 4453
No 414
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.50 E-value=0.00035 Score=66.50 Aligned_cols=140 Identities=16% Similarity=0.141 Sum_probs=71.5
Q ss_pred ceEcccCCcc-eEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCC--CCccceeEEEecCCeeEEEEeccCC
Q 012213 188 NVIGRGGAGV-VYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRH--RNIVRLKAFCSNKETNLLVYEYMPN 264 (468)
Q Consensus 188 ~~ig~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~ 264 (468)
+.|+.|.... +|+....+|..+++|....... ..+..|+.++..+.. -.+.+++.+..+.+ +++||++.+
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~-----~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~ 96 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG-----GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGD 96 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT-----CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCS
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC-----ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCC
Confidence 3465555444 6777664477787775432210 224456666655532 23556676643333 789999977
Q ss_pred CChhhhcccCC---------------------C---CCCCHHHHH-------H-------------HHHHHHHHHHHhh-
Q 012213 265 GSLGEVLHGKR---------------------G---SFLKWEMRL-------K-------------IAIEAAKGLSYLH- 299 (468)
Q Consensus 265 gsL~~~l~~~~---------------------~---~~l~~~~~~-------~-------------i~~~ia~~l~~LH- 299 (468)
..+.+++.... . ..++..... . ....+...+..+.
T Consensus 97 ~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~ 176 (333)
T 3csv_A 97 ALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILS 176 (333)
T ss_dssp CBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred cchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHH
Confidence 66654332110 0 011111100 0 0001111222221
Q ss_pred --hcCCCCeeecCCCCCcEEEcCC----CceEEeecccccc
Q 012213 300 --HDCSPLIIHRDVKSNNILLNSD----FEAHVADFGLAKY 334 (468)
Q Consensus 300 --~~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfgla~~ 334 (468)
......++|||+.+.||+++.+ ..+.|+||+.+..
T Consensus 177 ~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 177 AQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp HHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred hcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1124469999999999999875 6799999998864
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.48 E-value=1.5e-05 Score=69.16 Aligned_cols=100 Identities=11% Similarity=0.128 Sum_probs=72.4
Q ss_pred CCCC-cccc----cCCcccccCCCCCEEEccCCccccc----CCccccccccccEeeccCCccccc----CCcccccccc
Q 012213 1 MSRN-NFSG----IIPVEIGHCLLLTYLDLSQNHLSGP----IPVQITQIHILNYLNVSWNQLNAS----LPKEMGNMKS 67 (468)
Q Consensus 1 l~~N-~l~g----~~p~~~~~l~~L~~L~l~~n~l~g~----~p~~~~~l~~L~~l~ls~N~l~g~----~p~~~~~l~~ 67 (468)
|++| +|+. .+...+...++|++|+|++|+|+.. +...+...++|++|+|++|.++.. +...+...++
T Consensus 43 L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~ 122 (185)
T 1io0_A 43 LNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTS 122 (185)
T ss_dssp CTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSS
T ss_pred ecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCC
Confidence 4566 6653 2345566788999999999999742 445567778999999999999843 5667888889
Q ss_pred cccccc--cCcccCCCCC-----CcccccccCcccccCCC
Q 012213 68 LTSADF--SHNNFSGEIP-----EFGQYSFFNSTSFTGNP 100 (468)
Q Consensus 68 L~~l~l--s~N~l~~~~p-----~~~~~~~~~~~~~~~n~ 100 (468)
|+.|+| ++|.++..-. .+.....+..+++++|.
T Consensus 123 L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~ 162 (185)
T 1io0_A 123 LIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQ 162 (185)
T ss_dssp CCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSS
T ss_pred ceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCC
Confidence 999999 8898874311 12233567778887764
No 416
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=97.48 E-value=4.4e-05 Score=78.85 Aligned_cols=75 Identities=13% Similarity=0.022 Sum_probs=60.5
Q ss_pred CCCCccccc----CCcccccCCCCCEEEccCCccc----ccCCccccccccccEeeccCCcccccCCccccccccccccc
Q 012213 1 MSRNNFSGI----IPVEIGHCLLLTYLDLSQNHLS----GPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSAD 72 (468)
Q Consensus 1 l~~N~l~g~----~p~~~~~l~~L~~L~l~~n~l~----g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ 72 (468)
|++|.+++. ++..+.++++|++|+|++|.++ +.++..+.++++|+.|+|++|.+.+ +|..+..+++|+.|+
T Consensus 171 L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~ 249 (592)
T 3ogk_B 171 MEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFC 249 (592)
T ss_dssp CTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEE
T ss_pred CccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhc
Confidence 567777765 4555678899999999999997 4566677889999999999999885 788888888888888
Q ss_pred ccCc
Q 012213 73 FSHN 76 (468)
Q Consensus 73 ls~N 76 (468)
++++
T Consensus 250 l~~~ 253 (592)
T 3ogk_B 250 GGSL 253 (592)
T ss_dssp ECBC
T ss_pred cccc
Confidence 8753
No 417
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.43 E-value=0.00012 Score=59.33 Aligned_cols=52 Identities=21% Similarity=0.341 Sum_probs=24.8
Q ss_pred EEEccCCccc-ccCCccccccccccEeeccCCcccccCCc-ccccccccccccccCc
Q 012213 22 YLDLSQNHLS-GPIPVQITQIHILNYLNVSWNQLNASLPK-EMGNMKSLTSADFSHN 76 (468)
Q Consensus 22 ~L~l~~n~l~-g~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~l~~L~~l~ls~N 76 (468)
.++.+++.|+ ..+|..+. .+|+.|+|++|+|+ .||. .|..+++|+.|+|++|
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~N 65 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGAN 65 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSS
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCC-ccChhhhhhccccCEEEecCC
Confidence 5566666654 24554332 24555555555555 3433 2344444444444444
No 418
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.42 E-value=7.5e-06 Score=84.70 Aligned_cols=64 Identities=20% Similarity=0.216 Sum_probs=29.4
Q ss_pred ccCCCCCEEEccCCcccccCCccccc-cccccEeeccCCcccccCCccc-ccccccccccccCcccC
Q 012213 15 GHCLLLTYLDLSQNHLSGPIPVQITQ-IHILNYLNVSWNQLNASLPKEM-GNMKSLTSADFSHNNFS 79 (468)
Q Consensus 15 ~~l~~L~~L~l~~n~l~g~~p~~~~~-l~~L~~l~ls~N~l~g~~p~~~-~~l~~L~~l~ls~N~l~ 79 (468)
.++++|+.|+|++ .+++..+..++. +++|+.|+|++|.+++..+..+ ..+++|+.|++++|.++
T Consensus 429 ~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~ 494 (594)
T 2p1m_B 429 EHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFG 494 (594)
T ss_dssp HHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCC
T ss_pred hhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCc
Confidence 3444444444443 344333333333 4555555555555543333222 34455555555555553
No 419
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.42 E-value=0.00072 Score=63.35 Aligned_cols=72 Identities=11% Similarity=0.080 Sum_probs=44.6
Q ss_pred CcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCc-cceeEEEecCCeeEEEEecc-C
Q 012213 186 DNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNI-VRLKAFCSNKETNLLVYEYM-P 263 (468)
Q Consensus 186 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~-~ 263 (468)
..+.|+.|....+|+. +.+++|+....... ......|+..++.+....+ .+++++ +.+.-++++||+ +
T Consensus 22 ~i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~---~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~ 91 (301)
T 3dxq_A 22 GPLERLGGLTNLVFRA-----GDLCLRIPGKGTEE---YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAG 91 (301)
T ss_dssp SCEEEESCSSEEEEEE-----TTEEEEEECC-------CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTT
T ss_pred ceeEcCCcccccccee-----eeEEEECCCCCccc---eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCC
Confidence 3578999999999998 56888876532111 1224567777766643233 455554 344457899999 6
Q ss_pred CCCh
Q 012213 264 NGSL 267 (468)
Q Consensus 264 ~gsL 267 (468)
+.++
T Consensus 92 g~~l 95 (301)
T 3dxq_A 92 AQTM 95 (301)
T ss_dssp CEEC
T ss_pred CccC
Confidence 5444
No 420
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.34 E-value=2.8e-05 Score=80.38 Aligned_cols=86 Identities=12% Similarity=0.113 Sum_probs=53.9
Q ss_pred ccCCCCCEEEccCCcccccCCcccc-ccccccEeeccCC-ccccc-CCcccccccccccccccCcccCCCCCC-c----c
Q 012213 15 GHCLLLTYLDLSQNHLSGPIPVQIT-QIHILNYLNVSWN-QLNAS-LPKEMGNMKSLTSADFSHNNFSGEIPE-F----G 86 (468)
Q Consensus 15 ~~l~~L~~L~l~~n~l~g~~p~~~~-~l~~L~~l~ls~N-~l~g~-~p~~~~~l~~L~~l~ls~N~l~~~~p~-~----~ 86 (468)
..+++|++|+|++|.+++..+..+. ++++|+.|+|++| .++.. ++..+.++++|+.|++++|.+++..+. + .
T Consensus 102 ~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~ 181 (594)
T 2p1m_B 102 SSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPD 181 (594)
T ss_dssp HHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCT
T ss_pred HhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhh
Confidence 3567777777777777766666665 5777777777777 44422 444445677777777777776654332 1 1
Q ss_pred cccccCcccccCCC
Q 012213 87 QYSFFNSTSFTGNP 100 (468)
Q Consensus 87 ~~~~~~~~~~~~n~ 100 (468)
.+.++..+++++|.
T Consensus 182 ~~~~L~~L~l~~~~ 195 (594)
T 2p1m_B 182 TYTSLVSLNISCLA 195 (594)
T ss_dssp TCCCCCEEECTTCC
T ss_pred cCCcCcEEEecccC
Confidence 34456666666553
No 421
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.32 E-value=0.0011 Score=62.81 Aligned_cols=141 Identities=14% Similarity=0.140 Sum_probs=79.8
Q ss_pred ceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCC--CccceeEE-----EecCCeeEEEEe
Q 012213 188 NVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHR--NIVRLKAF-----CSNKETNLLVYE 260 (468)
Q Consensus 188 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~l~~~-----~~~~~~~~lv~e 260 (468)
..++ |....||+....+|+.+++|...... .....+..|...+..+... .+.+++.. ....+..+++++
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~---~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~ 107 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER---WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFP 107 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT---SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEE
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC---CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEE
Confidence 4566 88889999887778789999875321 1224566777777666321 23344432 122445678999
Q ss_pred ccCCCChhh-----h---------ccc----C---CCCCCCHHHH----HHH---------------HHHHHHHHHHhhh
Q 012213 261 YMPNGSLGE-----V---------LHG----K---RGSFLKWEMR----LKI---------------AIEAAKGLSYLHH 300 (468)
Q Consensus 261 ~~~~gsL~~-----~---------l~~----~---~~~~l~~~~~----~~i---------------~~~ia~~l~~LH~ 300 (468)
|++|..+.. + +|. . .....++... ..+ ...+.+.++.+..
T Consensus 108 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 187 (328)
T 1zyl_A 108 SVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTA 187 (328)
T ss_dssp CCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 998754421 0 111 0 0111222211 001 0111112222221
Q ss_pred ----cCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q 012213 301 ----DCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKY 334 (468)
Q Consensus 301 ----~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 334 (468)
.....++|||+++.||+++ + .+.|+||+.+..
T Consensus 188 ~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 188 HWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp HCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1234589999999999999 4 899999987753
No 422
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.32 E-value=0.00072 Score=63.93 Aligned_cols=142 Identities=14% Similarity=0.094 Sum_probs=78.4
Q ss_pred cceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCC--ccceeEE------EecCCeeEEE
Q 012213 187 NNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRN--IVRLKAF------CSNKETNLLV 258 (468)
Q Consensus 187 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~------~~~~~~~~lv 258 (468)
.+.|+.|....+|+....+| .+++|...... . ...+..|+.++..+.... +.+++.. ....+..+++
T Consensus 27 ~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~--~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l 101 (322)
T 2ppq_A 27 YKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--E--KNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAAL 101 (322)
T ss_dssp EEEECC---EEEEEEEESSC-CEEEEEECC-------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEE
T ss_pred eeccCCCcccceEEEEeCCc-cEEEEEeCCCC--C--HHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEE
Confidence 35677888899999987655 68889875421 1 134566777766553211 2223211 1223567899
Q ss_pred EeccCCCChhhh--------------cccCC----C------CCCCHHHHHHH------------HHHHHHHHHHhhhc-
Q 012213 259 YEYMPNGSLGEV--------------LHGKR----G------SFLKWEMRLKI------------AIEAAKGLSYLHHD- 301 (468)
Q Consensus 259 ~e~~~~gsL~~~--------------l~~~~----~------~~l~~~~~~~i------------~~~ia~~l~~LH~~- 301 (468)
++|++|..+... +|... . ....|.....- ...+...+++++..
T Consensus 102 ~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~ 181 (322)
T 2ppq_A 102 ISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHW 181 (322)
T ss_dssp EECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHC
T ss_pred EEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhC
Confidence 999998654210 12100 0 00123321110 01134445555432
Q ss_pred ---CCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q 012213 302 ---CSPLIIHRDVKSNNILLNSDFEAHVADFGLAK 333 (468)
Q Consensus 302 ---~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~ 333 (468)
....++|+|+.+.||+++.+..+.|+||+.+.
T Consensus 182 ~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 182 PKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp CCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred cccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 23459999999999999987666899998775
No 423
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.31 E-value=0.00025 Score=57.48 Aligned_cols=60 Identities=20% Similarity=0.326 Sum_probs=42.4
Q ss_pred cEeeccCCccc-ccCCcccccccccccccccCcccCCCCCC-cccccccCcccccCCCCCCCCC
Q 012213 45 NYLNVSWNQLN-ASLPKEMGNMKSLTSADFSHNNFSGEIPE-FGQYSFFNSTSFTGNPHLCGSY 106 (468)
Q Consensus 45 ~~l~ls~N~l~-g~~p~~~~~l~~L~~l~ls~N~l~~~~p~-~~~~~~~~~~~~~~n~~lcg~~ 106 (468)
..+|.++++|+ ..+|..+. ++|+.|+|++|+|+...+. |..+.++..+.+.+|||.|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~ 72 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCR 72 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGG
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCc
Confidence 46788888886 34775432 3577888888888865553 5667777788888888888764
No 424
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.20 E-value=7e-05 Score=72.23 Aligned_cols=85 Identities=12% Similarity=0.055 Sum_probs=56.0
Q ss_pred cCCCCCEEEccC--Cccccc-----CCccc--cccccccEeeccCCcccccCCcccc---cccccccccccCcccCCC--
Q 012213 16 HCLLLTYLDLSQ--NHLSGP-----IPVQI--TQIHILNYLNVSWNQLNASLPKEMG---NMKSLTSADFSHNNFSGE-- 81 (468)
Q Consensus 16 ~l~~L~~L~l~~--n~l~g~-----~p~~~--~~l~~L~~l~ls~N~l~g~~p~~~~---~l~~L~~l~ls~N~l~~~-- 81 (468)
.+++|+.|+|+. |...|. +...+ ..+++|++|+|++|.++...+..+. .+++|+.|+|+.|.|+..
T Consensus 217 ~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~ 296 (362)
T 2ra8_A 217 DLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGA 296 (362)
T ss_dssp BCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHH
T ss_pred cCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHH
Confidence 688999998863 332222 11122 3578999999999988754443333 578899999999988763
Q ss_pred --CCC-cccccccCcccccCCC
Q 012213 82 --IPE-FGQYSFFNSTSFTGNP 100 (468)
Q Consensus 82 --~p~-~~~~~~~~~~~~~~n~ 100 (468)
++. +..+..+..+++++|.
T Consensus 297 ~~L~~~L~~l~~L~~L~L~~n~ 318 (362)
T 2ra8_A 297 RLLLDHVDKIKHLKFINMKYNY 318 (362)
T ss_dssp HHHHTTHHHHTTCSEEECCSBB
T ss_pred HHHHhhcccCCcceEEECCCCc
Confidence 332 2456777888887663
No 425
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=97.19 E-value=0.00031 Score=66.83 Aligned_cols=90 Identities=17% Similarity=0.092 Sum_probs=64.4
Q ss_pred CCCCcccccCC-cccccCCCCCEEEccCCcccccCC-cccccccccc-EeeccCCcccccCCcccccccccccccccCcc
Q 012213 1 MSRNNFSGIIP-VEIGHCLLLTYLDLSQNHLSGPIP-VQITQIHILN-YLNVSWNQLNASLPKEMGNMKSLTSADFSHNN 77 (468)
Q Consensus 1 l~~N~l~g~~p-~~~~~l~~L~~L~l~~n~l~g~~p-~~~~~l~~L~-~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~ 77 (468)
|++|+++ .|| ..|.+|++|+.|+|++| ++ .|+ ..|.+|.+|+ .|+|++ +++..-+..|.+|++|+.|++++|+
T Consensus 233 L~~n~i~-~I~~~aF~~~~~L~~l~l~~n-i~-~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~ 308 (329)
T 3sb4_A 233 ISKTNAT-TIPDFTFAQKKYLLKIKLPHN-LK-TIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDK 308 (329)
T ss_dssp CTTBCCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSC
T ss_pred CCCCCcc-eecHhhhhCCCCCCEEECCcc-cc-eehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCc
Confidence 4567787 554 57888888888888888 77 454 4688888888 888888 6663234678888888888888888
Q ss_pred cCCCCC-CcccccccCcc
Q 012213 78 FSGEIP-EFGQYSFFNST 94 (468)
Q Consensus 78 l~~~~p-~~~~~~~~~~~ 94 (468)
++...+ .|..+.++..+
T Consensus 309 i~~I~~~aF~~~~~L~~l 326 (329)
T 3sb4_A 309 ITTLGDELFGNGVPSKLI 326 (329)
T ss_dssp CCEECTTTTCTTCCCCEE
T ss_pred cCccchhhhcCCcchhhh
Confidence 874444 25554444443
No 426
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.17 E-value=0.00088 Score=66.19 Aligned_cols=72 Identities=18% Similarity=0.256 Sum_probs=48.1
Q ss_pred ceEcccCCcceEEEEcCC--------CcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCc-cceeEEEecCCeeEEE
Q 012213 188 NVIGRGGAGVVYRGVTPN--------GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNI-VRLKAFCSNKETNLLV 258 (468)
Q Consensus 188 ~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv 258 (468)
+.|+.|....+|+....+ ++.+++|+.... .....+..|..++..+...++ .++++.+.+ .+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~----~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v 150 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP----ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRL 150 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC----CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC----CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEE
Confidence 568888889999998653 578899986321 111345678888877743333 566766532 389
Q ss_pred EeccCCCCh
Q 012213 259 YEYMPNGSL 267 (468)
Q Consensus 259 ~e~~~~gsL 267 (468)
+||++|-++
T Consensus 151 ~e~l~G~~l 159 (429)
T 1nw1_A 151 EEYIPSRPL 159 (429)
T ss_dssp ECCCCEEEC
T ss_pred EEEeCCccc
Confidence 999986444
No 427
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.94 E-value=0.0043 Score=59.94 Aligned_cols=140 Identities=17% Similarity=0.226 Sum_probs=82.1
Q ss_pred ceEcccCCcceEEEEcC--------CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCC-CCCccceeEEEecCCeeEEE
Q 012213 188 NVIGRGGAGVVYRGVTP--------NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIR-HRNIVRLKAFCSNKETNLLV 258 (468)
Q Consensus 188 ~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv 258 (468)
+.+..|-...+|+.... +++.+++|+.-.. ......+.+|..+++.+. +.-..++++++.+ .+|
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~---~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v 128 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI---LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRL 128 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc---cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccE
Confidence 46777888899998875 3578899875221 122345668888887774 2223566766543 399
Q ss_pred EeccCCCChhhh-----------------cccCC---CCCCC--HHHHHHHHHHHHH-------------------HHHH
Q 012213 259 YEYMPNGSLGEV-----------------LHGKR---GSFLK--WEMRLKIAIEAAK-------------------GLSY 297 (468)
Q Consensus 259 ~e~~~~gsL~~~-----------------l~~~~---~~~l~--~~~~~~i~~~ia~-------------------~l~~ 297 (468)
|||++|..|..- ||... +.... |.+..++..++.. .+..
T Consensus 129 ~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 208 (379)
T 3feg_A 129 EQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGN 208 (379)
T ss_dssp EECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHH
T ss_pred EEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHH
Confidence 999998655311 12111 11222 4555555544322 1222
Q ss_pred h----hhc-CCCCeeecCCCCCcEEEcCC----CceEEeecccccc
Q 012213 298 L----HHD-CSPLIIHRDVKSNNILLNSD----FEAHVADFGLAKY 334 (468)
Q Consensus 298 L----H~~-~~~~ivH~dlk~~Nill~~~----~~~kl~Dfgla~~ 334 (468)
| ... ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 209 L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 209 LRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2 221 23458999999999999876 7899999998864
No 428
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.90 E-value=0.0021 Score=62.02 Aligned_cols=73 Identities=10% Similarity=0.004 Sum_probs=42.4
Q ss_pred ceEcccCCcceEEEEcCC---------CcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCC-ccceeEEEecCCeeEE
Q 012213 188 NVIGRGGAGVVYRGVTPN---------GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRN-IVRLKAFCSNKETNLL 257 (468)
Q Consensus 188 ~~ig~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~l 257 (468)
..|+.|....+|+....+ ++.+++|...... ........|...+..+...+ ..++++.. . -++
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~---~~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~ 111 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV---DELYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGR 111 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG---GGTSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc---cceecHHHHHHHHHHHHhcCCCCceEEec--C--CcE
Confidence 467788888999988654 2678888754321 11112467777777764333 34566544 2 378
Q ss_pred EEeccCCCCh
Q 012213 258 VYEYMPNGSL 267 (468)
Q Consensus 258 v~e~~~~gsL 267 (468)
||||++|..+
T Consensus 112 v~e~i~G~~l 121 (369)
T 3c5i_A 112 IEEWLYGDPL 121 (369)
T ss_dssp EEECCCSEEC
T ss_pred EEEEecCCcC
Confidence 9999987544
No 429
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.86 E-value=0.0051 Score=53.78 Aligned_cols=103 Identities=17% Similarity=0.133 Sum_probs=66.6
Q ss_pred CChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccCCCccc
Q 012213 265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASECM 344 (468)
Q Consensus 265 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 344 (468)
-||.++|. ..+.+++++++|.++.|.+.+|.-+-.... + ..+=+.|..|++..+|.+...+ +.+.
T Consensus 33 vSL~eIL~-~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~----------- 97 (229)
T 2yle_A 33 LSLEEILR-LYNQPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD----------- 97 (229)
T ss_dssp EEHHHHHH-HHTSCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred ccHHHHHH-HcCCCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc-----------
Confidence 37888887 455679999999999999999877621110 0 1223457899999999998764 1110
Q ss_pred cccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCC
Q 012213 345 SAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRP 386 (468)
Q Consensus 345 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p 386 (468)
.....+.|||... ...+.+.-|||+|+++|.-+--..|
T Consensus 98 ---~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 ---AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ---ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1123466888764 3567899999999999998874444
No 430
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.81 E-value=0.01 Score=58.95 Aligned_cols=74 Identities=14% Similarity=0.110 Sum_probs=46.9
Q ss_pred cceEcccCCcceEEEEcCC-CcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCc-cceeEEEecCCeeEEEEeccCC
Q 012213 187 NNVIGRGGAGVVYRGVTPN-GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNI-VRLKAFCSNKETNLLVYEYMPN 264 (468)
Q Consensus 187 ~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv~e~~~~ 264 (468)
.+.|+.|-...+|+....+ +..+++|+..... .. .-....|..++..+...++ .++++++. + .+|+||++|
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~--~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G 185 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKT--DE-IINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDG 185 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-C--CS-CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCS
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCCh--hh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCC
Confidence 3578888889999998765 4778888763321 11 1123578888887765444 45777662 2 359999987
Q ss_pred CCh
Q 012213 265 GSL 267 (468)
Q Consensus 265 gsL 267 (468)
.+|
T Consensus 186 ~~l 188 (458)
T 2qg7_A 186 YAL 188 (458)
T ss_dssp EEC
T ss_pred ccC
Confidence 544
No 431
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.76 E-value=0.014 Score=55.63 Aligned_cols=32 Identities=16% Similarity=0.345 Sum_probs=27.9
Q ss_pred CCCeeecCCCCCcEEEcCCCceEEeecccccc
Q 012213 303 SPLIIHRDVKSNNILLNSDFEAHVADFGLAKY 334 (468)
Q Consensus 303 ~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 334 (468)
...++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 205 ~~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 205 KYVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp GCEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred CceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 34599999999999999888899999987764
No 432
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=96.51 E-value=0.00028 Score=67.99 Aligned_cols=85 Identities=9% Similarity=0.048 Sum_probs=58.2
Q ss_pred cCCCCCEEEccCCcccccCCcccc--ccccccEeeccC--Cccccc-----CCccc--ccccccccccccCcccCCCCCC
Q 012213 16 HCLLLTYLDLSQNHLSGPIPVQIT--QIHILNYLNVSW--NQLNAS-----LPKEM--GNMKSLTSADFSHNNFSGEIPE 84 (468)
Q Consensus 16 ~l~~L~~L~l~~n~l~g~~p~~~~--~l~~L~~l~ls~--N~l~g~-----~p~~~--~~l~~L~~l~ls~N~l~~~~p~ 84 (468)
.+++|+.|+|+.|.++...-..+. .+++|+.|+|+. |...|. +...+ ..+++|+.|+|++|.++...+.
T Consensus 191 ~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~ 270 (362)
T 2ra8_A 191 PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVE 270 (362)
T ss_dssp BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHH
T ss_pred cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHH
Confidence 378999999999988754444554 789999999964 222111 11222 3578999999999988743321
Q ss_pred ----cccccccCcccccCCC
Q 012213 85 ----FGQYSFFNSTSFTGNP 100 (468)
Q Consensus 85 ----~~~~~~~~~~~~~~n~ 100 (468)
...++.+..++++.|.
T Consensus 271 ~la~a~~~~~L~~LdLs~n~ 290 (362)
T 2ra8_A 271 MFLESDILPQLETMDISAGV 290 (362)
T ss_dssp HHHHCSSGGGCSEEECCSSC
T ss_pred HHHhCccCCCCCEEECCCCC
Confidence 1346678888888774
No 433
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.30 E-value=0.00066 Score=57.75 Aligned_cols=91 Identities=7% Similarity=0.090 Sum_probs=60.8
Q ss_pred cCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCc-ccccCCcccccc----cccccccccCc-ccCCC-
Q 012213 9 IIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQ-LNASLPKEMGNM----KSLTSADFSHN-NFSGE- 81 (468)
Q Consensus 9 ~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~-l~g~~p~~~~~l----~~L~~l~ls~N-~l~~~- 81 (468)
.+|.....-.+|+.||||++.++..=-..+.+|++|+.|+|+++. ++..==..++.+ ++|+.|+|+++ ++|-.
T Consensus 52 ~LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~G 131 (176)
T 3e4g_A 52 HLPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKG 131 (176)
T ss_dssp GSCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHH
T ss_pred cCCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHH
Confidence 345443333479999999999885433467899999999999985 663211234443 47999999998 46531
Q ss_pred CCCcccccccCcccccCC
Q 012213 82 IPEFGQYSFFNSTSFTGN 99 (468)
Q Consensus 82 ~p~~~~~~~~~~~~~~~n 99 (468)
+-.+..+++++.+++++-
T Consensus 132 l~~L~~~~~L~~L~L~~c 149 (176)
T 3e4g_A 132 IIALHHFRNLKYLFLSDL 149 (176)
T ss_dssp HHHGGGCTTCCEEEEESC
T ss_pred HHHHhcCCCCCEEECCCC
Confidence 222455677777777654
No 434
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=96.06 E-value=0.0073 Score=58.97 Aligned_cols=83 Identities=13% Similarity=0.160 Sum_probs=38.8
Q ss_pred cccccCCCCCEEEccCCccc-----ccCCccccccccccEeeccCCcccccCC-cccccccccccccccCcccCCCCC--
Q 012213 12 VEIGHCLLLTYLDLSQNHLS-----GPIPVQITQIHILNYLNVSWNQLNASLP-KEMGNMKSLTSADFSHNNFSGEIP-- 83 (468)
Q Consensus 12 ~~~~~l~~L~~L~l~~n~l~-----g~~p~~~~~l~~L~~l~ls~N~l~g~~p-~~~~~l~~L~~l~ls~N~l~~~~p-- 83 (468)
..|.+|++|+.++|.+|.+. ---+..|.+|++|+.++|. |+++ .|+ ..|.+|++|+.++|.+| ++ .|+
T Consensus 265 ~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~-~I~~~aF~~c~~L~~l~lp~~-l~-~I~~~ 340 (401)
T 4fdw_A 265 RAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIR-ILGQGLLGGNRKVTQLTIPAN-VT-QINFS 340 (401)
T ss_dssp TTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCC-EECTTTTTTCCSCCEEEECTT-CC-EECTT
T ss_pred hHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceE-EEhhhhhcCCCCccEEEECcc-cc-EEcHH
Confidence 34455555555555555443 1112345555555555555 2344 333 23455555555555433 33 222
Q ss_pred CcccccccCcccccCC
Q 012213 84 EFGQYSFFNSTSFTGN 99 (468)
Q Consensus 84 ~~~~~~~~~~~~~~~n 99 (468)
.|..+ ++..+.+.+|
T Consensus 341 aF~~~-~L~~l~l~~n 355 (401)
T 4fdw_A 341 AFNNT-GIKEVKVEGT 355 (401)
T ss_dssp SSSSS-CCCEEEECCS
T ss_pred hCCCC-CCCEEEEcCC
Confidence 13344 4555555544
No 435
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=95.82 E-value=0.0016 Score=55.38 Aligned_cols=68 Identities=7% Similarity=0.037 Sum_probs=50.0
Q ss_pred cccccCCCCCEEEccCCc-ccccCCcccccc----ccccEeeccCCc-ccccCCcccccccccccccccCcc-cC
Q 012213 12 VEIGHCLLLTYLDLSQNH-LSGPIPVQITQI----HILNYLNVSWNQ-LNASLPKEMGNMKSLTSADFSHNN-FS 79 (468)
Q Consensus 12 ~~~~~l~~L~~L~l~~n~-l~g~~p~~~~~l----~~L~~l~ls~N~-l~g~~p~~~~~l~~L~~l~ls~N~-l~ 79 (468)
..+.+|++|++|+|+++. ++..-=..++.+ ++|+.|+|+++. +|..==..+..+++|+.|+|++.. ++
T Consensus 79 ~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~~L~L~~c~~It 153 (176)
T 3e4g_A 79 DHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNLKYLFLSDLPGVK 153 (176)
T ss_dssp GGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTCCEEEEESCTTCC
T ss_pred HHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCCCEEECCCCCCCC
Confidence 356789999999999995 774333345553 479999999974 763211357789999999999884 54
No 436
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.76 E-value=0.038 Score=53.60 Aligned_cols=143 Identities=19% Similarity=0.255 Sum_probs=80.5
Q ss_pred ceEcccCCcceEEEEcCC--------CcEEEEEEecccCCC----------CCc------hhHHHHHHHHHhCCC-CCCc
Q 012213 188 NVIGRGGAGVVYRGVTPN--------GEQVAVKKLLGITKG----------SSH------DNGLSAEIRTLGKIR-HRNI 242 (468)
Q Consensus 188 ~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~----------~~~------~~~~~~e~~~l~~l~-h~ni 242 (468)
+.|..|-...+|+...++ +..|.++..-..... -+. .+....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456667778899987754 367888875332110 000 012234777777774 3334
Q ss_pred cceeEEEecCCeeEEEEeccCCCChhh--h---------------cccCC---CCCCC--HHHHHHHHHHHH--------
Q 012213 243 VRLKAFCSNKETNLLVYEYMPNGSLGE--V---------------LHGKR---GSFLK--WEMRLKIAIEAA-------- 292 (468)
Q Consensus 243 v~l~~~~~~~~~~~lv~e~~~~gsL~~--~---------------l~~~~---~~~l~--~~~~~~i~~~ia-------- 292 (468)
.++++++.. .+|+||+++-+|.. + +|... ..... |....++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 567776642 38999999754421 1 11111 11222 334444443321
Q ss_pred --------------HHH----HHhhhc-CCCCeeecCCCCCcEEEcCC------CceEEeecccccc
Q 012213 293 --------------KGL----SYLHHD-CSPLIIHRDVKSNNILLNSD------FEAHVADFGLAKY 334 (468)
Q Consensus 293 --------------~~l----~~LH~~-~~~~ivH~dlk~~Nill~~~------~~~kl~Dfgla~~ 334 (468)
.-+ .+|... ....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 111 223222 23458899999999999887 7899999987753
No 437
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.53 E-value=0.074 Score=52.06 Aligned_cols=139 Identities=14% Similarity=0.118 Sum_probs=81.9
Q ss_pred ceEcccCCcceEEEEcCC--------CcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCC-ccceeEEEecCCeeEEE
Q 012213 188 NVIGRGGAGVVYRGVTPN--------GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRN-IVRLKAFCSNKETNLLV 258 (468)
Q Consensus 188 ~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lv 258 (468)
+.+..|-...+|+....+ ++.+++|+..... ...-...+|..+++.+...+ ..++++.+. -++|
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t---~~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I 148 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHV---GKFYDSKVELDVFRYLSNINIAPNIIADFP----EGRI 148 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC----CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCc---chhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEE
Confidence 467778888899988753 5788888753321 11122467888777774222 345565432 3789
Q ss_pred EeccCCCChhh--h---------------cccC-----------CCCCCCHHHHHHHHHHH-------------------
Q 012213 259 YEYMPNGSLGE--V---------------LHGK-----------RGSFLKWEMRLKIAIEA------------------- 291 (468)
Q Consensus 259 ~e~~~~gsL~~--~---------------l~~~-----------~~~~l~~~~~~~i~~~i------------------- 291 (468)
+||++|..|.. . +|.. ...+.-|.+..++..++
T Consensus 149 ~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l 228 (424)
T 3mes_A 149 EEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKI 228 (424)
T ss_dssp EECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHH
T ss_pred EEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHH
Confidence 99999865421 0 1110 01111244444443322
Q ss_pred HHHHHHhh---------------------hcCCCCeeecCCCCCcEEEcCCCceEEeecccccc
Q 012213 292 AKGLSYLH---------------------HDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKY 334 (468)
Q Consensus 292 a~~l~~LH---------------------~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~ 334 (468)
...+.+|. ......++|+|+.+.||+ +.++.+.++||..+..
T Consensus 229 ~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 229 LEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 11223322 111345899999999999 8888999999998864
No 438
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=94.88 E-value=0.03 Score=54.59 Aligned_cols=82 Identities=12% Similarity=0.092 Sum_probs=55.0
Q ss_pred cccccCCCCCEEEccCCcccccC-CccccccccccEeeccCCcccccCCcccccccccccccccCcccCCCCC--Ccccc
Q 012213 12 VEIGHCLLLTYLDLSQNHLSGPI-PVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSGEIP--EFGQY 88 (468)
Q Consensus 12 ~~~~~l~~L~~L~l~~n~l~g~~-p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p--~~~~~ 88 (468)
..|.++ +|+.++|.+ .++ .| +..|.+|.+|+.++|+.|+++ .||.....+.+|+.+.+.+| ++ .|+ .|..+
T Consensus 152 ~aF~~~-~L~~i~lp~-~l~-~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~lp~~-l~-~I~~~aF~~~ 225 (401)
T 4fdw_A 152 MAFFNS-TVQEIVFPS-TLE-QLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVLLPVT-LK-EIGSQAFLKT 225 (401)
T ss_dssp TTTTTC-CCCEEECCT-TCC-EECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEECCTT-CC-EECTTTTTTC
T ss_pred HhcCCC-CceEEEeCC-Ccc-EehHHHhhCcccCCeeecCCCcce-EechhhEeecccCEEEeCCc-hh-eehhhHhhCC
Confidence 345554 588888875 666 44 356788888888888888887 57766555678888888744 54 333 25566
Q ss_pred cccCcccccCC
Q 012213 89 SFFNSTSFTGN 99 (468)
Q Consensus 89 ~~~~~~~~~~n 99 (468)
.++..+.+..|
T Consensus 226 ~~L~~l~l~~~ 236 (401)
T 4fdw_A 226 SQLKTIEIPEN 236 (401)
T ss_dssp TTCCCEECCTT
T ss_pred CCCCEEecCCC
Confidence 66666666654
No 439
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=94.61 E-value=0.011 Score=51.29 Aligned_cols=64 Identities=11% Similarity=0.093 Sum_probs=47.6
Q ss_pred cCCCCCEEEccCC-cccc----cCCccccccccccEeeccCCccccc----CCcccccccccccccccCcccC
Q 012213 16 HCLLLTYLDLSQN-HLSG----PIPVQITQIHILNYLNVSWNQLNAS----LPKEMGNMKSLTSADFSHNNFS 79 (468)
Q Consensus 16 ~l~~L~~L~l~~n-~l~g----~~p~~~~~l~~L~~l~ls~N~l~g~----~p~~~~~l~~L~~l~ls~N~l~ 79 (468)
+-+.|+.|+|++| +|.. .|-..+..-++|+.|+|++|.+... |-..+..-+.|+.|+|++|+|.
T Consensus 39 ~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 39 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCC
T ss_pred cCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCC
Confidence 3467999999986 7762 2344567788999999999998722 2233445678999999999987
No 440
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=92.97 E-value=0.036 Score=47.93 Aligned_cols=66 Identities=17% Similarity=0.114 Sum_probs=48.5
Q ss_pred cccccCCCCCEEEccCCccccc----CCccccccccccEeeccCCccccc----CCcccccccccccccccCcc
Q 012213 12 VEIGHCLLLTYLDLSQNHLSGP----IPVQITQIHILNYLNVSWNQLNAS----LPKEMGNMKSLTSADFSHNN 77 (468)
Q Consensus 12 ~~~~~l~~L~~L~l~~n~l~g~----~p~~~~~l~~L~~l~ls~N~l~g~----~p~~~~~l~~L~~l~ls~N~ 77 (468)
..+..-+.|+.|+|++|+|... |-..+..-++|+.|+|++|.|... |-..+..-+.|+.|+|++|.
T Consensus 64 ~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~ 137 (197)
T 1pgv_A 64 EAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQR 137 (197)
T ss_dssp HHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCS
T ss_pred HHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCc
Confidence 3445567899999999999832 334466778999999999999732 22335556679999998763
No 441
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=91.35 E-value=0.38 Score=46.41 Aligned_cols=59 Identities=14% Similarity=0.334 Sum_probs=27.4
Q ss_pred cccccccccEeeccCCcccccCC-cccccccccccccccCcccCCCCCC--cccccccCcccccCC
Q 012213 37 QITQIHILNYLNVSWNQLNASLP-KEMGNMKSLTSADFSHNNFSGEIPE--FGQYSFFNSTSFTGN 99 (468)
Q Consensus 37 ~~~~l~~L~~l~ls~N~l~g~~p-~~~~~l~~L~~l~ls~N~l~~~~p~--~~~~~~~~~~~~~~n 99 (468)
.|.+|.+|+.++|..| ++ .|. ..|.+|.+|+.+.+..+ ++ .|+. |..+.+|+.+.+.+|
T Consensus 306 aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~ 367 (394)
T 4gt6_A 306 VFAGCISLKSIDIPEG-IT-QILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNIEYSGS 367 (394)
T ss_dssp TTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSC
T ss_pred eecCCCCcCEEEeCCc-cc-EehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCc
Confidence 3455555555555433 33 232 23555555555555433 33 3332 444445555555444
No 442
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=90.89 E-value=0.42 Score=45.77 Aligned_cols=63 Identities=14% Similarity=0.188 Sum_probs=27.4
Q ss_pred ccccCCCCCEEEccCCcccccC-CccccccccccEeeccCCcccccCCc-ccccccccccccccCcccC
Q 012213 13 EIGHCLLLTYLDLSQNHLSGPI-PVQITQIHILNYLNVSWNQLNASLPK-EMGNMKSLTSADFSHNNFS 79 (468)
Q Consensus 13 ~~~~l~~L~~L~l~~n~l~g~~-p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~l~~L~~l~ls~N~l~ 79 (468)
.+.++..|+.+.+..+ ++ .| ...+.++.+|+.+.+..+ ++ .++. .|.++++|+.+.+.+|.++
T Consensus 235 ~f~~~~~L~~i~lp~~-v~-~I~~~aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~ 299 (379)
T 4h09_A 235 AFYGMKALDEIAIPKN-VT-SIGSFLLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVMDNSAIE 299 (379)
T ss_dssp TTTTCSSCCEEEECTT-CC-EECTTTTTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEECCTTCC
T ss_pred cccCCccceEEEcCCC-cc-EeCccccceeehhcccccccc-ce-eccccccccccccccccccccccc
Confidence 3444555665555444 33 22 223444444554444332 22 2222 3444444444444444443
No 443
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=90.87 E-value=1.8 Score=37.67 Aligned_cols=124 Identities=7% Similarity=0.057 Sum_probs=82.5
Q ss_pred HHHHHhCCCCCCccceeEEEecCCeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeec
Q 012213 230 EIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHR 309 (468)
Q Consensus 230 e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~ 309 (468)
|+..|.. .||+.+.. ..-.+.+...+.|+.-+ +..++-. -...+...+++++.+|+....+++. -+|-
T Consensus 36 el~LL~~-~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~~---ik~~~~~eKlr~l~ni~~l~~~~~~-----r~tf 103 (215)
T 4ann_A 36 LMYLLEQ-HSPYFIDA-ELTELRDSFQIHYDIND--NHTPFDN---IKSFTKNEKLRYLLNIKNLEEVNRT-----RYTF 103 (215)
T ss_dssp GGGGGGS-CCTTBCCE-EEEECSSEEEEEECCCT--TSEEGGG---GGGSCHHHHHHHHHHGGGGGGGGGS-----SEEC
T ss_pred HHHHHhc-cCCcccce-EEEEcccEEEEEEEcCc--ccCCHHH---HHhcCHHHHHHHHHHHHHHHHHhcC-----ceEE
Confidence 4444433 68888866 45556666666565433 2333221 1237789999999999988866653 4688
Q ss_pred CCCCCcEEEcCCCceEEeeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Q 012213 310 DVKSNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGD 389 (468)
Q Consensus 310 dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~ 389 (468)
-+.|+|++++.++.+++.=.|+...+. |. ..++..=.-.+=+++..+++++..|++
T Consensus 104 ~L~P~NL~f~~~~~p~i~~RGik~~l~-------------------P~-----~~~ee~fL~qyKAliiall~~K~~Fe~ 159 (215)
T 4ann_A 104 VLAPDELFFTRDGLPIAKTRGLQNVVD-------------------PL-----PVSEAEFLTRYKALVICAFNEKQSFDA 159 (215)
T ss_dssp CCSGGGEEECTTSCEEESCCEETTTBS-------------------CC-----CCCHHHHHHHHHHHHHHHHCTTCCHHH
T ss_pred EEecceEEEcCCCCEEEEEccCccCCC-------------------CC-----CCCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 899999999999999998777543322 21 122223334577899999999999864
No 444
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=89.98 E-value=0.25 Score=47.70 Aligned_cols=63 Identities=14% Similarity=0.337 Sum_probs=50.9
Q ss_pred cccccCCCCCEEEccCCcccccCC-ccccccccccEeeccCCcccccCCc-ccccccccccccccCccc
Q 012213 12 VEIGHCLLLTYLDLSQNHLSGPIP-VQITQIHILNYLNVSWNQLNASLPK-EMGNMKSLTSADFSHNNF 78 (468)
Q Consensus 12 ~~~~~l~~L~~L~l~~n~l~g~~p-~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~l~~L~~l~ls~N~l 78 (468)
..|.+|.+|+.++|..| ++ .|. ..|.+|.+|+.+.|..+ ++ .|+. .|.+|++|+.+++++|..
T Consensus 305 ~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~L~~i~ip~s-v~-~I~~~aF~~C~~L~~i~~~~~~~ 369 (394)
T 4gt6_A 305 SVFAGCISLKSIDIPEG-IT-QILDDAFAGCEQLERIAIPSS-VT-KIPESAFSNCTALNNIEYSGSRS 369 (394)
T ss_dssp TTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEECTT-CC-BCCGGGGTTCTTCCEEEESSCHH
T ss_pred eeecCCCCcCEEEeCCc-cc-EehHhHhhCCCCCCEEEECcc-cC-EEhHhHhhCCCCCCEEEECCcee
Confidence 46778899999999865 66 554 47999999999999765 66 5654 689999999999998854
No 445
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=89.60 E-value=0.34 Score=46.72 Aligned_cols=59 Identities=15% Similarity=0.232 Sum_probs=29.3
Q ss_pred cccCCCCCEEEccCCcccccCC-ccccccccccEeeccCCcccccCC-cccccccccccccccCc
Q 012213 14 IGHCLLLTYLDLSQNHLSGPIP-VQITQIHILNYLNVSWNQLNASLP-KEMGNMKSLTSADFSHN 76 (468)
Q Consensus 14 ~~~l~~L~~L~l~~n~l~g~~p-~~~~~l~~L~~l~ls~N~l~g~~p-~~~~~l~~L~~l~ls~N 76 (468)
+..+.+|+.+.+..+ ++ .|+ ..|.+|.+|+.++|..+ ++ .|+ ..|.+|++|+.+++..|
T Consensus 293 F~~~~~L~~i~l~~~-i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 293 FYGCSSLTEVKLLDS-VK-FIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp TTTCTTCCEEEECTT-CC-EECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT
T ss_pred ccccccccccccccc-cc-eechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc
Confidence 344555555555433 33 332 24555566666665433 44 343 34555566666655544
No 446
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=89.31 E-value=0.47 Score=45.38 Aligned_cols=83 Identities=13% Similarity=0.257 Sum_probs=60.3
Q ss_pred cccccCCCCCEEEccCCcccccCC-ccccccccccEeeccCCcccccCC-cccccccccccccccCcccCCCCCC--ccc
Q 012213 12 VEIGHCLLLTYLDLSQNHLSGPIP-VQITQIHILNYLNVSWNQLNASLP-KEMGNMKSLTSADFSHNNFSGEIPE--FGQ 87 (468)
Q Consensus 12 ~~~~~l~~L~~L~l~~n~l~g~~p-~~~~~l~~L~~l~ls~N~l~g~~p-~~~~~l~~L~~l~ls~N~l~~~~p~--~~~ 87 (468)
..+.++.+|+.+.+..+ ++ .++ ..|.+|.+|+.+++.+|.++ .|+ ..|.+|.+|+.++|..| ++ .|+. |..
T Consensus 257 ~aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~-~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~ 331 (379)
T 4h09_A 257 FLLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVMDNSAIE-TLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKN 331 (379)
T ss_dssp TTTTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEECCTTCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTT
T ss_pred cccceeehhcccccccc-ce-eccccccccccccccccccccccc-eehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhC
Confidence 35567888999988654 55 454 46888999999999988888 564 46888999999999765 54 4443 666
Q ss_pred ccccCcccccCC
Q 012213 88 YSFFNSTSFTGN 99 (468)
Q Consensus 88 ~~~~~~~~~~~n 99 (468)
..+|..+.+..+
T Consensus 332 C~~L~~i~ip~~ 343 (379)
T 4h09_A 332 CKALSTISYPKS 343 (379)
T ss_dssp CTTCCCCCCCTT
T ss_pred CCCCCEEEECCc
Confidence 667777776554
No 447
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=88.98 E-value=0.36 Score=46.62 Aligned_cols=61 Identities=15% Similarity=0.224 Sum_probs=50.5
Q ss_pred cccccCCCCCEEEccCCcccccCC-ccccccccccEeeccCCcccccCC-cccccccccccccccCc
Q 012213 12 VEIGHCLLLTYLDLSQNHLSGPIP-VQITQIHILNYLNVSWNQLNASLP-KEMGNMKSLTSADFSHN 76 (468)
Q Consensus 12 ~~~~~l~~L~~L~l~~n~l~g~~p-~~~~~l~~L~~l~ls~N~l~g~~p-~~~~~l~~L~~l~ls~N 76 (468)
..|.+|++|+.++|.++ ++ .|+ ..|.+|.+|+.++|..| ++ .|+ ..|.+|++|+.+++..|
T Consensus 314 ~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 314 EAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp TTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT-CC-EECTTTBTTCTTCCEEEEEGG
T ss_pred hhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc-cc-EehHHHhhCCCCCCEEEECCC
Confidence 56888999999999755 77 564 57999999999999887 66 564 47899999999999765
No 448
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=88.48 E-value=0.22 Score=48.41 Aligned_cols=29 Identities=31% Similarity=0.546 Sum_probs=24.7
Q ss_pred eeecCCCCCcEEE------cCCCceEEeecccccc
Q 012213 306 IIHRDVKSNNILL------NSDFEAHVADFGLAKY 334 (468)
Q Consensus 306 ivH~dlk~~Nill------~~~~~~kl~Dfgla~~ 334 (468)
++|+|+.+.||++ +++..++++||-.|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 6799999999999 4466799999998864
No 449
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=86.76 E-value=4.6 Score=35.17 Aligned_cols=116 Identities=14% Similarity=0.140 Sum_probs=77.9
Q ss_pred CCCCccceeEEEecCCeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHH-HhhhcCCCCeeecCCCCCcE
Q 012213 238 RHRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLS-YLHHDCSPLIIHRDVKSNNI 316 (468)
Q Consensus 238 ~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~-~LH~~~~~~ivH~dlk~~Ni 316 (468)
.||++ -...-.+.+...+.++.-+++.=...+. .++...+++++.+|+.... +++. -+|--+.|+|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~-----~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~NL 115 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR-----KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPENL 115 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH-----TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGGE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH-----hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCceE
Confidence 67777 4444466777777776553332222332 2678899999999988777 5653 57888999999
Q ss_pred EEcCCCceEEeeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Q 012213 317 LLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGD 389 (468)
Q Consensus 317 ll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~ 389 (468)
++|.++.+++.=.|+-..+ +|. ..++.-=.-.+=+++..++.++..|++
T Consensus 116 ~f~~~~~p~i~hRGi~~~l-------------------pP~-----e~~ee~fl~qyKali~all~~K~~Fe~ 164 (219)
T 4ano_A 116 MFNRALEPFFLHVGVKESL-------------------PPD-----EWDDERLLREVKATVLALTEGEYRFDE 164 (219)
T ss_dssp EECTTCCEEESCCEETTTB-------------------SSC-----SCCHHHHHHHHHHHHHHHTTCSSCHHH
T ss_pred EEeCCCcEEEEEcCCcccC-------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 9999999999877754432 222 112222233477888899999888754
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=86.35 E-value=0.083 Score=52.43 Aligned_cols=61 Identities=8% Similarity=-0.061 Sum_probs=16.7
Q ss_pred cceEcccCCcceEEEEcCC-CcEEEE------EEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEe
Q 012213 187 NNVIGRGGAGVVYRGVTPN-GEQVAV------KKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCS 250 (468)
Q Consensus 187 ~~~ig~G~~g~Vy~~~~~~-~~~vav------K~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 250 (468)
.+.+| ||.||+|.+.. ..+||| |..+......+....+.+|..++...+|||+++..++..
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 34555 99999999854 367888 766543333333345778888888899999999988754
No 451
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=66.03 E-value=2.3 Score=26.39 Aligned_cols=10 Identities=30% Similarity=0.730 Sum_probs=4.2
Q ss_pred hhhHHHHHHH
Q 012213 137 ALGLLLCSLV 146 (468)
Q Consensus 137 ~~~~~~~~~~ 146 (468)
++|+++++++
T Consensus 18 vVGvll~vi~ 27 (44)
T 2jwa_A 18 VVGILLVVVL 27 (44)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4554433333
No 452
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=59.05 E-value=35 Score=31.63 Aligned_cols=134 Identities=11% Similarity=0.076 Sum_probs=69.1
Q ss_pred EcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEE--------------E------
Q 012213 190 IGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAF--------------C------ 249 (468)
Q Consensus 190 ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~--------------~------ 249 (468)
.-.| .+.||.... ++..|+||-.. ....+-+-.++...-.+.-|+.--+.-. .
T Consensus 77 s~~G-stgvff~~t-d~~~~VVK~s~-----~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~~l 149 (342)
T 1cja_A 77 SEKG-TEGLFFVET-ESGVFIVKRST-----NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFRVI 149 (342)
T ss_dssp CCST-TSCEEEEEE-SSCEEEEECCT-----THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSCHH
T ss_pred ccCC-CCCeEEEEe-CCCEEEEeCcH-----HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhHHH
Confidence 3444 455665555 57889999431 2222445555555555665553211100 0
Q ss_pred --ecCCeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHH--HHHHhhhcC-CCCeee-cCCCCCcEEEcCCCc
Q 012213 250 --SNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAK--GLSYLHHDC-SPLIIH-RDVKSNNILLNSDFE 323 (468)
Q Consensus 250 --~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~--~l~~LH~~~-~~~ivH-~dlk~~Nill~~~~~ 323 (468)
......+++|+|.+|..|.+.-+..-...+.. +.+.++++ ++..+.+.. +.+.+. .--.+.|||++++..
T Consensus 150 ~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~----~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~ 225 (342)
T 1cja_A 150 TTLANQANILLMELVRGITLNKLTTTSAPEVLTK----STMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGA 225 (342)
T ss_dssp HHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCH----HHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTT
T ss_pred HHhhcccceehhhhcCCCccccchhhhhhhhcCH----HHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCC
Confidence 01224569999998766654322110011222 22333322 344444433 333332 235789999987554
Q ss_pred -eEEeecccccc
Q 012213 324 -AHVADFGLAKY 334 (468)
Q Consensus 324 -~kl~Dfgla~~ 334 (468)
+.++|-+.+..
T Consensus 226 ~~~~IDhn~af~ 237 (342)
T 1cja_A 226 TVVPIDSKIIPL 237 (342)
T ss_dssp CEEECSCCCCCC
T ss_pred eEEEEcCCcccc
Confidence 88999998864
No 453
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=56.73 E-value=11 Score=23.44 Aligned_cols=7 Identities=14% Similarity=0.482 Sum_probs=2.7
Q ss_pred eeeeecc
Q 012213 151 AIIKTRK 157 (468)
Q Consensus 151 ~~~~~~~ 157 (468)
+++++|+
T Consensus 33 ~~~RRr~ 39 (44)
T 2ks1_B 33 LFMRRRH 39 (44)
T ss_dssp HHHHTTT
T ss_pred HHhhhhH
Confidence 3344433
No 454
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=54.44 E-value=6.2 Score=24.48 Aligned_cols=7 Identities=0% Similarity=0.373 Sum_probs=2.8
Q ss_pred eeeeecc
Q 012213 151 AIIKTRK 157 (468)
Q Consensus 151 ~~~~~~~ 157 (468)
+++++|+
T Consensus 32 ~~~RRRr 38 (44)
T 2l2t_A 32 VYVRRKS 38 (44)
T ss_dssp HHHHTTC
T ss_pred HHhhhhh
Confidence 3344433
No 455
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=40.53 E-value=1.4e+02 Score=30.16 Aligned_cols=83 Identities=17% Similarity=0.149 Sum_probs=52.0
Q ss_pred cceeEEEecCCeeEEEEeccCCCChhhhcc----------cCCCC-----CCCHHHHHHHHHHHHH--HHHHhhhcCCCC
Q 012213 243 VRLKAFCSNKETNLLVYEYMPNGSLGEVLH----------GKRGS-----FLKWEMRLKIAIEAAK--GLSYLHHDCSPL 305 (468)
Q Consensus 243 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~----------~~~~~-----~l~~~~~~~i~~~ia~--~l~~LH~~~~~~ 305 (468)
++.+.+........+ .|++++.++.+.+. ..... ...|..+..++...|- -+.|+=.-
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILGi---- 476 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGV---- 476 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeeec----
Confidence 445666666665555 36777655544432 11111 1235666666666543 35565432
Q ss_pred eeecCCCCCcEEEcCCCceEEeeccccc
Q 012213 306 IIHRDVKSNNILLNSDFEAHVADFGLAK 333 (468)
Q Consensus 306 ivH~dlk~~Nill~~~~~~kl~Dfgla~ 333 (468)
+|=.++|||++.+|++.=+|||.+-
T Consensus 477 ---gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 477 ---GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp ---CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred ---cCCCCcceeEcCCCCEeeeehHHhh
Confidence 5778999999999999999999874
No 456
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=32.24 E-value=1.5e+02 Score=32.23 Aligned_cols=60 Identities=18% Similarity=0.150 Sum_probs=37.9
Q ss_pred ChhhhcccCCCCCCCHHHH-HHHHHHHHH--HHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q 012213 266 SLGEVLHGKRGSFLKWEMR-LKIAIEAAK--GLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAK 333 (468)
Q Consensus 266 sL~~~l~~~~~~~l~~~~~-~~i~~~ia~--~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~ 333 (468)
.|.+|+.... ....|..+ ..++...|- .+.|+=.- +|=.++|||++.+|++.=+|||.+-
T Consensus 899 ~L~~~f~~~~-~~~~~~~ar~nF~~S~A~ysvv~YiLgi-------gDRH~~NILid~tG~v~HIDFG~~f 961 (1091)
T 3hhm_A 899 TLHQWLKDKN-KGEIYDAAIDLFTRSCAGYCVATFILGI-------GDRHNSNIMVKDDGQLFHIDFGHFL 961 (1091)
T ss_dssp HHHHHHHTTS-CTTSHHHHHHHHHHHHHHHHHHHHHHTC-------CCCCTTTEEEETTSCEEECCCCCCS
T ss_pred HHHHHHHhcC-ChHHHHHHHHHHHHHhhhhhheEEEEee-------cCCCCcceEEeCCCCEEEEeehhhh
Confidence 3444444332 23345543 445555443 34555432 5888999999999999999999874
No 457
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=21.37 E-value=1.6e+02 Score=21.53 Aligned_cols=38 Identities=8% Similarity=0.043 Sum_probs=17.6
Q ss_pred cccccCCCCCEEEccCCcccccC-CccccccccccEeeccC
Q 012213 12 VEIGHCLLLTYLDLSQNHLSGPI-PVQITQIHILNYLNVSW 51 (468)
Q Consensus 12 ~~~~~l~~L~~L~l~~n~l~g~~-p~~~~~l~~L~~l~ls~ 51 (468)
..|.+|++|+.+.|..+ ++ .| ...|.+|.+|+.+.+..
T Consensus 14 ~aF~~c~~L~~i~iP~~-v~-~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 14 SLFAGNTVIREITVQPN-IG-LLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CTTTTCTTCCCEEECTT-SS-CCCTTSSTTCTTCCCEEECC
T ss_pred HHhcCCCCCcEEEcCCc-hh-eEcHHHHhccCCccEEEEcC
Confidence 34555555555555443 22 22 22345555555555443
No 458
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=20.80 E-value=53 Score=33.86 Aligned_cols=82 Identities=18% Similarity=0.195 Sum_probs=48.3
Q ss_pred ceeEEEecCCeeEEEEeccCCCChhhhcccC----------CCCC-----CCHHHHHHHHHHHHH--HHHHhhhcCCCCe
Q 012213 244 RLKAFCSNKETNLLVYEYMPNGSLGEVLHGK----------RGSF-----LKWEMRLKIAIEAAK--GLSYLHHDCSPLI 306 (468)
Q Consensus 244 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~----------~~~~-----l~~~~~~~i~~~ia~--~l~~LH~~~~~~i 306 (468)
+.+.+........+| |++++.++.+++... .... .....+..++..+|- -+.|+=.
T Consensus 477 ~~Y~Vipls~~~GLI-E~V~s~tl~~i~~~~~~l~~~f~~~~p~~~~~~~~~~~ar~nF~~SlA~~Svv~YILG------ 549 (696)
T 2x6h_A 477 TPYKVLATSSKHGFL-QYVDSCTVAEVLAREGNIHNFFRKHHPCDNGPYGISAEVMDTYIKSCAGYCVITYLLG------ 549 (696)
T ss_dssp CCCCEEESSTTCEEE-ECCCCEEHHHHHHHSSSHHHHHHHHSBCTTSSSSBCHHHHHHHHHHHHHHHHHHHHHT------
T ss_pred eccEEEeccCCCCee-eeCCCccHHHHHHhcChHHHHHHHHCCCccchhhhHHHHHHHHHHHHHHHHHHHHHcc------
Confidence 345555555555544 666655555544321 1111 112445555555443 3455532
Q ss_pred eecCCCCCcEEEcCCCceEEeeccccc
Q 012213 307 IHRDVKSNNILLNSDFEAHVADFGLAK 333 (468)
Q Consensus 307 vH~dlk~~Nill~~~~~~kl~Dfgla~ 333 (468)
=+|=.++|||++.+|++.=+|||.+-
T Consensus 550 -lGDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 550 -VGDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp -CCCCCTTTEEECTTSCEEECCCCSCT
T ss_pred -CCCCCCcceEEeCCCCEEEEeehhhh
Confidence 25889999999999999999999874
Done!