Query         012213
Match_columns 468
No_of_seqs    424 out of 4138
Neff          9.7 
Searched_HMMs 13730
Date          Mon Mar 25 04:59:52 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012213.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/012213hhsearch_scop -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1uwha_ d.144.1.7 (A:) B-Raf k 100.0 6.6E-56 4.8E-60  415.2  18.9  263  181-461     7-272 (276)
  2 d1sm2a_ d.144.1.7 (A:) Tyrosin 100.0 1.7E-55 1.2E-59  410.4  18.4  255  182-460     5-260 (263)
  3 d1qpca_ d.144.1.7 (A:) Lymphoc 100.0 3.8E-55 2.8E-59  409.8  17.9  257  181-460    12-268 (272)
  4 d1opja_ d.144.1.7 (A:) Abelson 100.0 6.1E-55 4.4E-59  411.2  18.7  262  181-465    16-279 (287)
  5 d1jpaa_ d.144.1.7 (A:) ephb2 r 100.0 1.2E-54 8.4E-59  411.8  18.4  263  181-464    25-296 (299)
  6 d1nvra_ d.144.1.7 (A:) Cell cy 100.0   3E-54 2.2E-58  402.3  20.5  254  181-454     4-259 (271)
  7 d1k2pa_ d.144.1.7 (A:) Bruton' 100.0 4.8E-54 3.5E-58  398.5  19.3  254  182-459     4-258 (258)
  8 d2java1 d.144.1.7 (A:3-271) Se 100.0 1.5E-54 1.1E-58  404.5  14.9  256  181-454     3-265 (269)
  9 d1fmka3 d.144.1.7 (A:249-533)  100.0 1.3E-53 9.2E-58  401.0  18.5  263  181-466    16-278 (285)
 10 d2j4za1 d.144.1.7 (A:126-388)  100.0 1.7E-53 1.2E-57  395.7  18.3  248  181-454     5-254 (263)
 11 d1xbba_ d.144.1.7 (A:) Tyrosin 100.0 1.3E-53 9.2E-58  400.1  17.3  250  188-459    13-267 (277)
 12 d1u59a_ d.144.1.7 (A:) Tyrosin 100.0 2.2E-53 1.6E-57  399.6  17.9  256  182-459     8-269 (285)
 13 d1yhwa1 d.144.1.7 (A:249-541)  100.0 6.9E-53   5E-57  397.3  21.2  250  181-454    19-269 (293)
 14 d1rjba_ d.144.1.7 (A:) Fl cyto 100.0 2.9E-53 2.1E-57  407.4  18.8  257  181-457    36-322 (325)
 15 d1mqba_ d.144.1.7 (A:) epha2 r 100.0   5E-53 3.6E-57  397.9  19.6  260  181-460     6-271 (283)
 16 d2jfla1 d.144.1.7 (A:21-308) S 100.0 7.1E-53 5.2E-57  396.8  16.9  249  182-454    12-268 (288)
 17 d1lufa_ d.144.1.7 (A:) Musk ty 100.0 8.2E-53   6E-57  400.2  17.2  260  181-460    12-300 (301)
 18 d1uu3a_ d.144.1.7 (A:) 3-phosp 100.0 6.4E-53 4.7E-57  396.8  14.5  252  181-454     7-260 (288)
 19 d1byga_ d.144.1.7 (A:) Carboxy 100.0 2.1E-52 1.5E-56  388.1  15.9  252  181-461     6-259 (262)
 20 d1t4ha_ d.144.1.7 (A:) Protein 100.0 6.5E-52 4.7E-56  386.5  18.6  249  184-454    11-265 (270)
 21 d1a06a_ d.144.1.7 (A:) Calmodu 100.0 7.1E-52 5.2E-56  393.5  18.4  254  178-454     5-263 (307)
 22 d1s9ja_ d.144.1.7 (A:) Dual sp 100.0 6.6E-52 4.8E-56  397.3  17.8  268  181-458     5-303 (322)
 23 d1u5ra_ d.144.1.7 (A:) Serine/ 100.0 9.1E-52 6.7E-56  392.9  17.4  249  179-454    12-266 (309)
 24 d1mp8a_ d.144.1.7 (A:) Focal a 100.0 1.8E-51 1.3E-55  385.4  17.2  258  181-461     6-268 (273)
 25 d1xkka_ d.144.1.7 (A:) EGF rec 100.0 2.4E-51 1.8E-55  392.7  18.2  256  183-460    10-271 (317)
 26 d1koaa2 d.144.1.7 (A:5915-6264 100.0 2.7E-51 1.9E-55  396.2  17.1  256  177-454    21-279 (350)
 27 d1r0pa_ d.144.1.7 (A:) Hepatoc 100.0 1.2E-50 8.8E-55  386.0  20.4  256  187-462    32-294 (311)
 28 d1jksa_ d.144.1.7 (A:) Death-a 100.0 4.7E-50 3.4E-54  379.6  24.0  256  178-454     6-270 (293)
 29 d1koba_ d.144.1.7 (A:) Twitchi 100.0 7.6E-51 5.5E-55  393.3  18.8  254  178-454    25-282 (352)
 30 d1u46a_ d.144.1.7 (A:) Activat 100.0 2.4E-51 1.7E-55  383.8  13.5  259  182-460     8-273 (273)
 31 d1p4oa_ d.144.1.7 (A:) Insulin 100.0 5.4E-51   4E-55  388.5  16.2  263  181-463    19-296 (308)
 32 d1ywna1 d.144.1.7 (A:818-1166) 100.0 1.3E-50 9.7E-55  384.9  16.7  261  181-460    12-295 (299)
 33 d1fgka_ d.144.1.7 (A:) Fibrobl 100.0 1.6E-50 1.2E-54  383.7  16.5  260  181-460    12-295 (299)
 34 d1fvra_ d.144.1.7 (A:) Tie2 ki 100.0 2.9E-50 2.1E-54  383.8  18.3  258  181-461     9-285 (309)
 35 d1vjya_ d.144.1.7 (A:) Type I  100.0 8.4E-51 6.1E-55  386.1  14.2  271  182-466     3-302 (303)
 36 d1o6la_ d.144.1.7 (A:) Pkb kin 100.0 6.3E-50 4.6E-54  384.2  20.4  250  181-454     4-260 (337)
 37 d1t46a_ d.144.1.7 (A:) c-KIT r 100.0 2.2E-50 1.6E-54  385.0  16.7  260  181-460    22-306 (311)
 38 d1fota_ d.144.1.7 (A:) cAMP-de 100.0   1E-49 7.6E-54  380.1  19.8  247  181-454     3-256 (316)
 39 d1phka_ d.144.1.7 (A:) gamma-s 100.0   3E-49 2.2E-53  369.8  18.8  253  181-454     2-269 (277)
 40 d1o6ya_ d.144.1.7 (A:) Mycobac 100.0 4.4E-49 3.2E-53  370.1  19.8  263  180-460     5-275 (277)
 41 d1rdqe_ d.144.1.7 (E:) cAMP-de 100.0   5E-49 3.7E-53  380.5  18.9  247  181-454    40-293 (350)
 42 d2ozaa1 d.144.1.7 (A:51-385) M 100.0 6.3E-49 4.6E-53  377.7  19.4  252  178-454     7-271 (335)
 43 d1tkia_ d.144.1.7 (A:) Titin,  100.0 1.1E-48 7.7E-53  374.2  19.6  249  179-454     2-257 (321)
 44 d1omwa3 d.144.1.7 (A:186-549)  100.0 1.2E-48 8.7E-53  379.8  20.1  251  181-454     3-264 (364)
 45 d1gz8a_ d.144.1.7 (A:) Cyclin- 100.0 1.1E-48 8.2E-53  371.1  18.2  274  182-462     2-292 (298)
 46 d1xjda_ d.144.1.7 (A:) Protein 100.0 5.5E-49   4E-53  375.7  15.5  248  182-453     2-253 (320)
 47 d1ua2a_ d.144.1.7 (A:) Cell di 100.0 1.5E-48 1.1E-52  370.7  14.2  265  187-459     3-286 (299)
 48 d1ob3a_ d.144.1.7 (A:) Cyclin- 100.0 4.8E-48 3.5E-52  364.9  15.5  265  182-454     2-280 (286)
 49 d1xwsa_ d.144.1.7 (A:) Proto-o 100.0 3.6E-48 2.6E-52  362.7  13.4  242  181-454     3-254 (273)
 50 d1blxa_ d.144.1.7 (A:) Cyclin- 100.0 9.3E-47 6.8E-51  359.5  18.0  271  181-459     6-299 (305)
 51 d3blha1 d.144.1.7 (A:8-325) Ce 100.0 4.5E-45 3.3E-49  349.8  22.4  267  181-454     9-304 (318)
 52 d1csna_ d.144.1.7 (A:) Casein  100.0   1E-44 7.4E-49  342.6  23.7  261  181-459     4-276 (293)
 53 d1ckia_ d.144.1.7 (A:) Casein  100.0 7.4E-45 5.4E-49  345.2  22.5  258  182-459     7-276 (299)
 54 d1unla_ d.144.1.7 (A:) Cyclin- 100.0 5.5E-45   4E-49  345.1  21.3  266  182-454     2-282 (292)
 55 d1q5ka_ d.144.1.7 (A:) Glycoge 100.0 4.4E-45 3.2E-49  354.1  20.4  268  183-463    21-313 (350)
 56 d1cm8a_ d.144.1.7 (A:) MAP kin 100.0 6.9E-46   5E-50  359.6  14.5  269  179-460    15-308 (346)
 57 d1pmea_ d.144.1.7 (A:) MAP kin 100.0 7.3E-45 5.3E-49  351.8  20.1  264  181-454     7-294 (345)
 58 d1vzoa_ d.144.1.7 (A:) Ribosom 100.0 5.5E-45   4E-49  348.4  16.1  255  181-454    23-291 (322)
 59 d2b1pa1 d.144.1.7 (A:46-400) c 100.0 4.3E-44 3.2E-48  347.7  19.0  262  181-454    16-310 (355)
 60 d3bqca1 d.144.1.7 (A:3-330) Pr 100.0   1E-43 7.3E-48  341.9  21.1  258  181-454    34-318 (328)
 61 d2gfsa1 d.144.1.7 (A:5-352) MA 100.0 9.2E-44 6.7E-48  345.1  17.1  270  180-462    16-310 (348)
 62 d1q8ya_ d.144.1.7 (A:) Sky1p { 100.0 7.7E-38 5.6E-42  304.9  16.9  269  183-462    14-337 (362)
 63 d1zara2 d.144.1.9 (A:91-281) R  99.9 6.2E-25 4.5E-29  192.9   7.3  170  186-377     4-189 (191)
 64 d1ogqa_ c.10.2.8 (A:) Polygala  99.7 5.1E-17 3.7E-21  153.2   7.5  109    1-110   204-312 (313)
 65 d1w8aa_ c.10.2.7 (A:) Slit {Fr  99.5 3.9E-15 2.9E-19  129.6   8.4  105    1-105    36-142 (192)
 66 d1dcea3 c.10.2.2 (A:444-567) R  99.5 8.8E-15 6.4E-19  117.4   8.4   96    1-101     5-102 (124)
 67 d1ogqa_ c.10.2.8 (A:) Polygala  99.4 4.8E-14 3.5E-18  132.4   5.6  101    1-101    57-161 (313)
 68 d2ifga3 c.10.2.7 (A:36-191) Hi  99.4 3.6E-13 2.6E-17  112.5   9.0  103    2-106    16-120 (156)
 69 d1ozna_ c.10.2.7 (A:) Reticulo  99.4   3E-13 2.2E-17  125.0   6.9  105    1-105   136-241 (284)
 70 d1w8aa_ c.10.2.7 (A:) Slit {Fr  99.3 1.1E-12 7.9E-17  113.8   8.1   99    1-102    15-115 (192)
 71 d1p9ag_ c.10.2.7 (G:) von Will  99.3 2.4E-12 1.8E-16  117.6   9.3   95   12-106   118-212 (266)
 72 d1a9na_ c.10.2.4 (A:) Spliceso  99.3 1.1E-12 8.3E-17  110.1   6.0   96    1-100    25-123 (162)
 73 d1dcea3 c.10.2.2 (A:444-567) R  99.2 6.9E-12   5E-16  100.1   7.3   77    1-81     27-105 (124)
 74 d1xkua_ c.10.2.7 (A:) Decorin   99.1 5.3E-11 3.9E-15  110.7   9.0  103    1-104   178-287 (305)
 75 d1a9na_ c.10.2.4 (A:) Spliceso  99.1   2E-11 1.5E-15  102.3   4.5   86   13-101    13-99  (162)
 76 d2ifga3 c.10.2.7 (A:36-191) Hi  99.0 2.5E-10 1.8E-14   94.8   7.4   78    1-79     38-116 (156)
 77 d1m9la_ c.10.3.1 (A:) Outer ar  98.9 7.2E-12 5.2E-16  108.9  -4.5   87   10-100    40-126 (198)
 78 d1ozna_ c.10.2.7 (A:) Reticulo  98.9 5.5E-10   4E-14  102.6   8.1   98    3-100    90-188 (284)
 79 d1p9ag_ c.10.2.7 (G:) von Will  98.9 8.7E-10 6.4E-14  100.2   8.9   96    1-99     62-158 (266)
 80 d1xkua_ c.10.2.7 (A:) Decorin   98.9 1.5E-09 1.1E-13  100.7   8.8   98    1-101   157-254 (305)
 81 d2omza2 c.10.2.1 (A:33-416) In  98.9 7.4E-10 5.4E-14  106.0   6.9   91    2-99    293-383 (384)
 82 d2omxa2 c.10.2.1 (A:37-235) In  98.8 4.3E-09 3.1E-13   91.0   8.6   81   14-99     58-138 (199)
 83 d1m9la_ c.10.3.1 (A:) Outer ar  98.8 5.7E-11 4.2E-15  103.0  -3.8   96    1-101    55-152 (198)
 84 d1h6ta2 c.10.2.1 (A:31-240) In  98.8 4.3E-09 3.1E-13   91.9   7.6   92    2-100    32-123 (210)
 85 d1h6ta2 c.10.2.1 (A:31-240) In  98.8 5.2E-09 3.8E-13   91.4   7.5   72    2-79     54-125 (210)
 86 d1h6ua2 c.10.2.1 (A:36-262) In  98.7 4.8E-09 3.5E-13   92.7   6.3   89    2-97    137-225 (227)
 87 d2omxa2 c.10.2.1 (A:37-235) In  98.7 1.5E-08 1.1E-12   87.5   7.7   93    1-100    69-161 (199)
 88 d2omza2 c.10.2.1 (A:33-416) In  98.7 7.7E-09 5.6E-13   98.7   6.0   70    1-76    314-383 (384)
 89 d1j7la_ d.144.1.6 (A:) Type II  98.6   1E-07 7.5E-12   85.8  10.7  132  193-334    25-213 (263)
 90 d1h6ua2 c.10.2.1 (A:36-262) In  98.5 3.1E-08 2.3E-12   87.3   5.5   69    1-75    158-226 (227)
 91 d1jl5a_ c.10.2.6 (A:) Leucine   98.5 1.9E-07 1.4E-11   87.4   9.1   88    1-101    45-132 (353)
 92 d1xwdc1 c.10.2.7 (C:18-259) Fo  98.4 1.2E-07 8.7E-12   84.2   4.8   94    3-100    17-114 (242)
 93 d1xwdc1 c.10.2.7 (C:18-259) Fo  98.3 2.3E-07 1.7E-11   82.3   5.6   90    1-91     36-127 (242)
 94 d1koha1 c.10.2.3 (A:201-362) m  98.3 3.3E-08 2.4E-12   82.2  -0.5   45   34-79     57-104 (162)
 95 d1nd4a_ d.144.1.6 (A:) Aminogl  98.3 2.1E-06 1.5E-10   76.5  11.6  130  189-333    17-204 (255)
 96 d1jl5a_ c.10.2.6 (A:) Leucine   98.0 4.2E-06 3.1E-10   77.8   8.0   76    1-86     65-140 (353)
 97 d1koha1 c.10.2.3 (A:201-362) m  98.0 2.4E-07 1.7E-11   76.9  -0.9   73   11-84     58-133 (162)
 98 d2pula1 d.144.1.6 (A:5-396) Me  97.8 6.8E-05 4.9E-09   71.0  11.7   77  188-266    32-117 (392)
 99 d2astb2 c.10.1.3 (B:2136-2419)  97.5 8.1E-06 5.9E-10   74.0   0.4   86   13-98     41-130 (284)
100 d1z7xw1 c.10.1.1 (W:1-460) Rib  97.3 1.4E-05   1E-09   77.0  -0.4  100    1-100     9-123 (460)
101 d1z7xw1 c.10.1.1 (W:1-460) Rib  97.3 1.8E-05 1.3E-09   76.2   0.3   83   18-100   312-408 (460)
102 d2astb2 c.10.1.3 (B:2136-2419)  97.1 0.00015 1.1E-08   65.3   4.8   83   17-99    147-235 (284)
103 d2ca6a1 c.10.1.2 (A:2-345) Rna  97.0 7.4E-05 5.4E-09   69.3   1.7   89   12-100   180-284 (344)
104 d1zyla1 d.144.1.6 (A:4-328) Rd  97.0  0.0013 9.4E-08   60.1  10.1  134  196-334    36-220 (325)
105 d2ca6a1 c.10.1.2 (A:2-345) Rna  96.9 9.7E-05   7E-09   68.5   1.0   86   15-100   155-254 (344)
106 d1nw1a_ d.144.1.8 (A:) Choline  96.5  0.0053 3.9E-07   57.5  10.2   72  188-267    48-128 (395)
107 d2ppqa1 d.144.1.6 (A:5-320) Ho  96.1  0.0044 3.2E-07   56.0   7.3   31  303-333   182-212 (316)
108 d1pgva_ c.10.1.1 (A:) Tropomod  95.9  0.0014   1E-07   53.4   2.2   84   16-99     13-110 (167)
109 d1pgva_ c.10.1.1 (A:) Tropomod  95.5   0.002 1.5E-07   52.5   1.8   67   13-79     39-113 (167)
110 d1io0a_ c.10.1.1 (A:) Tropomod  91.8   0.023 1.7E-06   45.7   1.3   65   15-79     14-87  (166)
111 d1io0a_ c.10.1.1 (A:) Tropomod  91.4   0.037 2.7E-06   44.4   2.2   67   13-79     41-117 (166)
112 d1cjaa_ d.144.1.3 (A:) Actin-f  72.7      10 0.00074   32.6   9.5  135  190-332    76-235 (342)
113 d1kq8a_ a.4.5.14 (A:) HFH-1 (H  31.9      19  0.0014   23.6   3.2   27  433-459     3-29  (75)

No 1  
>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.6e-56  Score=415.24  Aligned_cols=263  Identities=29%  Similarity=0.403  Sum_probs=206.2

Q ss_pred             hhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEe
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYE  260 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  260 (468)
                      .++|+..+.||+|+||+||+|+++  ..||||+++.........+.|.+|+.++++++|||||++++++.+ +..++|||
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~~-~~~~lv~E   83 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA-PQLAIVTQ   83 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESS--SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred             cccEEEEEEEeeCCCcEEEEEEEC--CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEec-cEEEEEEe
Confidence            456788899999999999999875  359999987655555566789999999999999999999998754 56899999


Q ss_pred             ccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccCC
Q 012213          261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGA  340 (468)
Q Consensus       261 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  340 (468)
                      |+++|+|.++++.. ...+++..+..++.|||+||+|||+.+   |+||||||+|||++.++.+||+|||+|+.......
T Consensus        84 y~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~gl~yLH~~~---ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~  159 (276)
T d1uwha_          84 WCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG  159 (276)
T ss_dssp             CCCEEEHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTSSEEECCCCCSCC------
T ss_pred             cCCCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHhcCC---EeccccCHHHEEEcCCCCEEEccccceeeccccCC
Confidence            99999999999743 345999999999999999999999877   99999999999999999999999999987764444


Q ss_pred             CccccccccCccccCccccCC---CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcc
Q 012213          341 SECMSAVAGSYGYIAPEYAYT---LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILD  417 (468)
Q Consensus       341 ~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  417 (468)
                      ........||+.|+|||++.+   ..++.++|||||||++|||+||+.||.+.....    ..... ...      ....
T Consensus       160 ~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~----~~~~~-~~~------~~~~  228 (276)
T d1uwha_         160 SHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD----QIIFM-VGR------GYLS  228 (276)
T ss_dssp             ------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH----HHHHH-HHH------TSCC
T ss_pred             cccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHH----HHHHH-Hhc------CCCC
Confidence            444566789999999999864   358999999999999999999999997643211    11010 000      0111


Q ss_pred             ccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccC
Q 012213          418 QRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQK  461 (468)
Q Consensus       418 ~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~  461 (468)
                      +.+...+......+.+++.+||+.||++||||+||++.|+.+..
T Consensus       229 p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~  272 (276)
T d1uwha_         229 PDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIELLAR  272 (276)
T ss_dssp             CCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            11122233445678889999999999999999999999998753


No 2  
>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.7e-55  Score=410.38  Aligned_cols=255  Identities=24%  Similarity=0.399  Sum_probs=199.8

Q ss_pred             hccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEec
Q 012213          182 ECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEY  261 (468)
Q Consensus       182 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  261 (468)
                      ++|+..+.||+|+||+||+|.+.+++.||||++...   ....++|.+|++++++++|||||+++|+|.+++..++||||
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~---~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~lv~E~   81 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG---AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEF   81 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEETTTEEEEEEECCSS---SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred             HHcEEEEEEeeCCCeEEEEEEECCCCEEEEEEECCC---cCcHHHHHHHHHHHHhcCCCCcccccceeccCCceEEEEEe
Confidence            356778899999999999999998999999998642   23346799999999999999999999999999999999999


Q ss_pred             cCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccCCC
Q 012213          262 MPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGAS  341 (468)
Q Consensus       262 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~  341 (468)
                      +++|+|.+++... ...++|..+++++.|||.||+|||+.+   |+||||||+|||+++++.+||+|||+++.+.... .
T Consensus        82 ~~~g~L~~~l~~~-~~~~~~~~~~~i~~qia~gl~~lH~~~---iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~-~  156 (263)
T d1sm2a_          82 MEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-Y  156 (263)
T ss_dssp             CTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCTTCSGGGEEECGGGCEEECSCC-----------
T ss_pred             cCCCcHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHhhhccc---eeecccchhheeecCCCCeEecccchheeccCCC-c
Confidence            9999999998743 346899999999999999999999887   9999999999999999999999999998775332 2


Q ss_pred             ccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhC-CCCCCCCCCCCcCHHHHHHHhhcccccchhhhccccC
Q 012213          342 ECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITG-RRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQRL  420 (468)
Q Consensus       342 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  420 (468)
                      .......||+.|+|||++.+..++.++|||||||++|||+|+ ++||....     ..+.....           .....
T Consensus       157 ~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~-----~~~~~~~i-----------~~~~~  220 (263)
T d1sm2a_         157 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS-----NSEVVEDI-----------STGFR  220 (263)
T ss_dssp             --------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCC-----HHHHHHHH-----------HHTCC
T ss_pred             eeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCC-----HHHHHHHH-----------HhcCC
Confidence            223446789999999999999999999999999999999995 55554322     11111111           11111


Q ss_pred             CCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213          421 SNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ  460 (468)
Q Consensus       421 ~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~  460 (468)
                      ...+.....++.+++..||+.||++||||+||++.|+++.
T Consensus       221 ~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~  260 (263)
T d1sm2a_         221 LYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIA  260 (263)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHH
Confidence            1223334567889999999999999999999999999875


No 3  
>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.8e-55  Score=409.81  Aligned_cols=257  Identities=27%  Similarity=0.366  Sum_probs=208.9

Q ss_pred             hhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEe
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYE  260 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  260 (468)
                      .++|+..+.||+|+||+||+|.+++++.||||++....   ...+.|.+|++++++++|||||+++|++.+ +..++|||
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~~~~~~---~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-~~~~iv~E   87 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS---MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITE   87 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred             HHHeEEeEEEecCCCcEEEEEEECCCCEEEEEEEccCc---CCHHHHHHHHHHHHhCCCCCEeEEEeeecc-CCeEEEEE
Confidence            46778889999999999999999888999999986432   334679999999999999999999998854 56799999


Q ss_pred             ccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccCC
Q 012213          261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGA  340 (468)
Q Consensus       261 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  340 (468)
                      |+++|+|.+++.......++|..+++++.|||+||+|||+.+   |+||||||+|||+++++.+||+|||+|+.+... .
T Consensus        88 y~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~---ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~-~  163 (272)
T d1qpca_          88 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDN-E  163 (272)
T ss_dssp             CCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSS-C
T ss_pred             eCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccchhheeeecccceeeccccceEEccCC-c
Confidence            999999999887655556999999999999999999999877   999999999999999999999999999987532 2


Q ss_pred             CccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccccC
Q 012213          341 SECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQRL  420 (468)
Q Consensus       341 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  420 (468)
                      ........||+.|+|||++.+..++.++|||||||++|||+||..|+.....    ..+..           ..+.....
T Consensus       164 ~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~----~~~~~-----------~~i~~~~~  228 (272)
T d1qpca_         164 YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT----NPEVI-----------QNLERGYR  228 (272)
T ss_dssp             EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC----HHHHH-----------HHHHTTCC
T ss_pred             cccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCC----HHHHH-----------HHHHhcCC
Confidence            2334456789999999999988999999999999999999996555433111    11111           11111111


Q ss_pred             CCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213          421 SNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ  460 (468)
Q Consensus       421 ~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~  460 (468)
                      ...+......+.+++.+||+.||++||||+||+++|+++-
T Consensus       229 ~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~f  268 (272)
T d1qpca_         229 MVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF  268 (272)
T ss_dssp             CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             CCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhh
Confidence            2223334567888999999999999999999999998763


No 4  
>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=6.1e-55  Score=411.24  Aligned_cols=262  Identities=25%  Similarity=0.343  Sum_probs=215.9

Q ss_pred             hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEE
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY  259 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  259 (468)
                      .++|+..+.||+|+||+||+|.+. +++.||||+++..   ....++|.+|+.++++++|||||+++++|.+.+..++||
T Consensus        16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~---~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv~   92 (287)
T d1opja_          16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT   92 (287)
T ss_dssp             GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTT---CSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCc---cchHHHHHHHHHHHHhCCCCCEecCCccEeeCCeeEEEe
Confidence            456778899999999999999985 5888999998643   233467999999999999999999999999999999999


Q ss_pred             eccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccC
Q 012213          260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTG  339 (468)
Q Consensus       260 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~  339 (468)
                      ||+++|+|.+++.......+++..+..++.|||.||+|||+.+   |+||||||+|||+++++.+||+|||+|+..... 
T Consensus        93 E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~---iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~-  168 (287)
T d1opja_          93 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGD-  168 (287)
T ss_dssp             ECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCCTTTCCSS-
T ss_pred             ecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCC---cccCccccCeEEECCCCcEEEccccceeecCCC-
Confidence            9999999999998766678999999999999999999999887   999999999999999999999999999876532 


Q ss_pred             CCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcccc
Q 012213          340 ASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQR  419 (468)
Q Consensus       340 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  419 (468)
                      .........|++.|+|||++.+..++.++|||||||++|||++|..|+....    +...            +.+.+...
T Consensus       169 ~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~----~~~~------------~~~~i~~~  232 (287)
T d1opja_         169 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQ------------VYELLEKD  232 (287)
T ss_dssp             SSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTC----CHHH------------HHHHHHTT
T ss_pred             CceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcc----hHHH------------HHHHHhcC
Confidence            2333344568999999999999999999999999999999999776654311    1111            11111111


Q ss_pred             C-CCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCCCCc
Q 012213          420 L-SNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKPNTF  465 (468)
Q Consensus       420 ~-~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~~~~  465 (468)
                      . ...+......+.+++..||+.||++||||+||++.|+.+...+.+
T Consensus       233 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~~~~~  279 (287)
T d1opja_         233 YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSI  279 (287)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTSSSCH
T ss_pred             CCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHhCCC
Confidence            1 222334456788999999999999999999999999998665543


No 5  
>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=1.2e-54  Score=411.78  Aligned_cols=263  Identities=27%  Similarity=0.461  Sum_probs=200.7

Q ss_pred             hhccCCcceEcccCCcceEEEEcCC-Cc---EEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeE
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVTPN-GE---QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNL  256 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~---~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~  256 (468)
                      .++|+..+.||+|+||+||+|.++. ++   .||||++.... .....+.|.+|++++++++|||||+++|+|.+++..+
T Consensus        25 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~~  103 (299)
T d1jpaa_          25 ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY-TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVM  103 (299)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred             hhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECccc-CHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence            4567788999999999999998753 32   58888875332 2233457999999999999999999999999999999


Q ss_pred             EEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccc
Q 012213          257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQ  336 (468)
Q Consensus       257 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~  336 (468)
                      +||||+++|+|.+++... ...++|.++.+++.|||+||+|||+.+   |+||||||+|||++.++++||+|||+++.+.
T Consensus       104 iv~Ey~~~g~L~~~~~~~-~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~  179 (299)
T d1jpaa_         104 IITEFMENGSLDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLADMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLE  179 (299)
T ss_dssp             EEEECCTTEEHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred             EEEEecCCCcceeeeccc-cCCCCHHHHHHHHHHHHHHHHHHhhCC---CccCccccceEEECCCCcEEECCcccceEcc
Confidence            999999999999988743 345899999999999999999999877   9999999999999999999999999998775


Q ss_pred             ccCCCc---cccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccch
Q 012213          337 DTGASE---CMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGV  412 (468)
Q Consensus       337 ~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (468)
                      ......   ......||+.|+|||.+.+..++.++|||||||++|||+| |++||.+....  .+..             
T Consensus       180 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~--~~~~-------------  244 (299)
T d1jpaa_         180 DDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQ--DVIN-------------  244 (299)
T ss_dssp             ----------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHH-------------
T ss_pred             CCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHH--HHHH-------------
Confidence            332221   1223457899999999999999999999999999999998 89999763311  1111             


Q ss_pred             hhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhc-cCCCC
Q 012213          413 VKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQA-QKPNT  464 (468)
Q Consensus       413 ~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~-~~~~~  464 (468)
                       .+........+.+....+.+++.+||+.||++||||.||++.|+++ +.++.
T Consensus       245 -~i~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~p~s  296 (299)
T d1jpaa_         245 -AIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRNPNS  296 (299)
T ss_dssp             -HHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGGG
T ss_pred             -HHHcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcChhh
Confidence             1111111223344566788999999999999999999999999886 44443


No 6  
>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3e-54  Score=402.33  Aligned_cols=254  Identities=22%  Similarity=0.304  Sum_probs=204.7

Q ss_pred             hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEE
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY  259 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  259 (468)
                      .++|+..+.||+|+||+||+|.++ +|+.||||++..... ....+.+.+|++++++++|||||++++++.+++..++||
T Consensus         4 ~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivm   82 (271)
T d1nvra_           4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL   82 (271)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhc-chHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEE
Confidence            467888999999999999999984 689999999864332 222356899999999999999999999999999999999


Q ss_pred             eccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccC
Q 012213          260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTG  339 (468)
Q Consensus       260 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~  339 (468)
                      ||+++|+|.+++..  ...+++.++..++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+|+.+....
T Consensus        83 Ey~~gg~L~~~l~~--~~~l~e~~~~~i~~qi~~al~ylH~~~---IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~  157 (271)
T d1nvra_          83 EYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNN  157 (271)
T ss_dssp             ECCTTEEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred             eccCCCcHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHcC---CccCcccHHHEEECCCCCEEEccchhheeeccCC
Confidence            99999999999964  346999999999999999999999887   9999999999999999999999999999876444


Q ss_pred             CCccccccccCccccCccccCCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccc
Q 012213          340 ASECMSAVAGSYGYIAPEYAYTLKV-DEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQ  418 (468)
Q Consensus       340 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  418 (468)
                      ........+||+.|+|||++.+..+ +.++|||||||++|||+||++||............+   .....          
T Consensus       158 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~---~~~~~----------  224 (271)
T d1nvra_         158 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW---KEKKT----------  224 (271)
T ss_dssp             EECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHH---HTTCT----------
T ss_pred             ccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHH---hcCCC----------
Confidence            4444556789999999999988776 578999999999999999999997633221111111   00000          


Q ss_pred             cCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213          419 RLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ  454 (468)
Q Consensus       419 ~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~  454 (468)
                       ...........+.+++.+|++.||++|||++|+++
T Consensus       225 -~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         225 -YLNPWKKIDSAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             -TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             -CCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence             01111223456778999999999999999999965


No 7  
>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.8e-54  Score=398.51  Aligned_cols=254  Identities=23%  Similarity=0.382  Sum_probs=212.0

Q ss_pred             hccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEec
Q 012213          182 ECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEY  261 (468)
Q Consensus       182 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  261 (468)
                      ++|+..+.||+|+||+||+|++++++.||||+++...   ...++|.+|+.++++++||||++++|+|.+++..++||||
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~l~~~~---~~~~~~~~Ev~~~~~l~HpnIv~~~g~~~~~~~~~iv~Ey   80 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS---MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY   80 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEETTTEEEEEEEEESSS---SCHHHHHHHHHHHHTCCCTTBCCEEEEECCSSSEEEEEEC
T ss_pred             HHCEEeEEEecCCCeEEEEEEECCCCEEEEEEECcCc---CCHHHHHHHHHHHHhcCCCceeeEEEEEeeCCceEEEEEc
Confidence            4677889999999999999999888899999987432   2346799999999999999999999999999999999999


Q ss_pred             cCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccCCC
Q 012213          262 MPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGAS  341 (468)
Q Consensus       262 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~  341 (468)
                      +++|+|.+++... ...+++..+.+++.|||+||+|||+.+   |+||||||+||++++++.+||+|||+++.+... ..
T Consensus        81 ~~~g~l~~~~~~~-~~~~~~~~~~~i~~qi~~gl~~LH~~~---iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~-~~  155 (258)
T d1k2pa_          81 MANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD-EY  155 (258)
T ss_dssp             CTTEEHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHHTT---BCCSCCSGGGEEECTTCCEEECCCSSCCBCSSS-SC
T ss_pred             cCCCcHHHhhhcc-ccCCcHHHHHHHHHHHHHHHHHHhhcC---cccccccceeEEEcCCCcEEECcchhheeccCC-Cc
Confidence            9999999997643 345889999999999999999999887   999999999999999999999999999876533 22


Q ss_pred             ccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccccC
Q 012213          342 ECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQRL  420 (468)
Q Consensus       342 ~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  420 (468)
                      .......||+.|+|||.+.+..++.++|||||||++|||+| |+.||......     +..           ..+.....
T Consensus       156 ~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~-----~~~-----------~~i~~~~~  219 (258)
T d1k2pa_         156 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-----ETA-----------EHIAQGLR  219 (258)
T ss_dssp             CCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHH-----HHH-----------HHHHTTCC
T ss_pred             eeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHH-----HHH-----------HHHHhCCC
Confidence            23345678999999999999999999999999999999998 89999764321     111           11111111


Q ss_pred             CCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhc
Q 012213          421 SNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQA  459 (468)
Q Consensus       421 ~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~  459 (468)
                      ...+......+.+++.+||+.||++|||++||++.|.++
T Consensus       220 ~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~di  258 (258)
T d1k2pa_         220 LYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV  258 (258)
T ss_dssp             CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred             CCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhCC
Confidence            223334456788999999999999999999999999764


No 8  
>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.5e-54  Score=404.49  Aligned_cols=256  Identities=24%  Similarity=0.367  Sum_probs=196.4

Q ss_pred             hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEec--CCeeEE
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSN--KETNLL  257 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~l  257 (468)
                      .++|+..+.||+|+||+||+|.+ .+|+.||||++..........+.+.+|++++++++|||||++++++.+  .+..++
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~i   82 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   82 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEE
T ss_pred             chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEE
Confidence            35688889999999999999987 468999999987654444444678999999999999999999999865  445789


Q ss_pred             EEeccCCCChhhhcccC--CCCCCCHHHHHHHHHHHHHHHHHhhhcC--CCCeeecCCCCCcEEEcCCCceEEeeccccc
Q 012213          258 VYEYMPNGSLGEVLHGK--RGSFLKWEMRLKIAIEAAKGLSYLHHDC--SPLIIHRDVKSNNILLNSDFEAHVADFGLAK  333 (468)
Q Consensus       258 v~e~~~~gsL~~~l~~~--~~~~l~~~~~~~i~~~ia~~l~~LH~~~--~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~  333 (468)
                      ||||+++|+|.+++...  ....+++..++.++.||+.||+|||+.+  ..+|+||||||+|||++.++.+||+|||+|+
T Consensus        83 vmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~  162 (269)
T d2java1          83 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR  162 (269)
T ss_dssp             EEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHH
T ss_pred             EEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeecccee
Confidence            99999999999998642  3456999999999999999999999864  2459999999999999999999999999999


Q ss_pred             cccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchh
Q 012213          334 YLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVV  413 (468)
Q Consensus       334 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (468)
                      .+...  ........||+.|+|||++.+..++.++|||||||++|||+||++||.+.+.     .+.           ..
T Consensus       163 ~~~~~--~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~-----~~~-----------~~  224 (269)
T d2java1         163 ILNHD--TSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ-----KEL-----------AG  224 (269)
T ss_dssp             HC-------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHH-----------HH
T ss_pred             ecccC--CCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCH-----HHH-----------HH
Confidence            87532  2223457899999999999999999999999999999999999999975321     111           11


Q ss_pred             hhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213          414 KILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ  454 (468)
Q Consensus       414 ~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~  454 (468)
                      .+........+.....++.+++.+||+.||++|||++|+++
T Consensus       225 ~i~~~~~~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         225 KIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             HHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            11122222233344567888999999999999999999974


No 9  
>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.3e-53  Score=401.05  Aligned_cols=263  Identities=28%  Similarity=0.363  Sum_probs=207.5

Q ss_pred             hhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEe
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYE  260 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  260 (468)
                      .++|+..+.||+|+||+||+|.+++++.||||++....   ...+.|.+|+.++++++|||||+++|+|.+ +..++|||
T Consensus        16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~~~vAiK~l~~~~---~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-~~~~lv~E   91 (285)
T d1fmka3          16 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT---MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE   91 (285)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS---SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred             HHHEEEeeEEeeCCCeEEEEEEECCCCEEEEEEECccc---CCHHHHHHHHHHHHhcccCCEeEEEEEEec-CCeEEEEE
Confidence            46788899999999999999999988899999986432   234679999999999999999999999854 56899999


Q ss_pred             ccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccCC
Q 012213          261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGA  340 (468)
Q Consensus       261 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  340 (468)
                      |+++|+|.+++.......++|.+++.++.|||.||+|||+.+   |+||||||+|||+++++++||+|||+++.+... .
T Consensus        92 y~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~---ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~-~  167 (285)
T d1fmka3          92 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDN-E  167 (285)
T ss_dssp             CCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC-------
T ss_pred             ecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhh---eecccccceEEEECCCCcEEEcccchhhhccCC-C
Confidence            999999999987666667999999999999999999999887   999999999999999999999999999876532 2


Q ss_pred             CccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccccC
Q 012213          341 SECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQRL  420 (468)
Q Consensus       341 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~  420 (468)
                      ........||+.|+|||++....++.++|||||||++|||+||..|+....    ...+......           ....
T Consensus       168 ~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~----~~~~~~~~i~-----------~~~~  232 (285)
T d1fmka3         168 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM----VNREVLDQVE-----------RGYR  232 (285)
T ss_dssp             --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC----CHHHHHHHHH-----------TTCC
T ss_pred             ceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCC----CHHHHHHHHH-----------hcCC
Confidence            233345678999999999999999999999999999999999766654322    1111111111           1111


Q ss_pred             CCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCCCCcc
Q 012213          421 SNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKPNTFQ  466 (468)
Q Consensus       421 ~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~~~~~  466 (468)
                      ...+.....++.+++.+||+.||++||||++|+++|++.......+
T Consensus       233 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~p~  278 (285)
T d1fmka3         233 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQ  278 (285)
T ss_dssp             CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCC
T ss_pred             CCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCCCC
Confidence            1223344567889999999999999999999999999876544443


No 10 
>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.7e-53  Score=395.67  Aligned_cols=248  Identities=27%  Similarity=0.368  Sum_probs=205.1

Q ss_pred             hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCC-CCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITK-GSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV  258 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv  258 (468)
                      .++|+..+.||+|+||+||+|+++ +++.||+|++..... .......+.+|+.++++++|||||++++++.+++..++|
T Consensus         5 l~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~iv   84 (263)
T d2j4za1           5 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI   84 (263)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEECCEEEEE
Confidence            456888899999999999999985 688999999864321 223346789999999999999999999999999999999


Q ss_pred             EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213          259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT  338 (468)
Q Consensus       259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~  338 (468)
                      |||+++|+|.+++...  ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+|+.....
T Consensus        85 mEy~~~g~L~~~l~~~--~~l~e~~~~~i~~qi~~al~~lH~~~---ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~  159 (263)
T d2j4za1          85 LEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS  159 (263)
T ss_dssp             EECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC
T ss_pred             EeecCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeeeeccccceecCCCCEeecccceeeecCCC
Confidence            9999999999999643  35899999999999999999999887   999999999999999999999999999865422


Q ss_pred             CCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccc
Q 012213          339 GASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQ  418 (468)
Q Consensus       339 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  418 (468)
                          ......||+.|+|||++.+..++.++|||||||++|||+||+.||.+...     .+...           .+...
T Consensus       160 ----~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-----~~~~~-----------~i~~~  219 (263)
T d2j4za1         160 ----RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY-----QETYK-----------RISRV  219 (263)
T ss_dssp             ----CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHH-----------HHHTT
T ss_pred             ----cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCH-----HHHHH-----------HHHcC
Confidence                23456799999999999999999999999999999999999999965321     11111           11111


Q ss_pred             cCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213          419 RLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ  454 (468)
Q Consensus       419 ~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~  454 (468)
                      . ...+......+.+++.+|++.||++|||++|+++
T Consensus       220 ~-~~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         220 E-FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             C-CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             C-CCCCccCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence            1 1122233456778999999999999999999986


No 11 
>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.3e-53  Score=400.14  Aligned_cols=250  Identities=25%  Similarity=0.383  Sum_probs=199.9

Q ss_pred             ceEcccCCcceEEEEcC---CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEeccCC
Q 012213          188 NVIGRGGAGVVYRGVTP---NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYMPN  264 (468)
Q Consensus       188 ~~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~  264 (468)
                      +.||+|+||+||+|.++   .++.||||+++.........++|.+|++++++++|||||+++|+|.+ +..++||||+++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence            57999999999999864   34679999997554444445679999999999999999999999965 457899999999


Q ss_pred             CChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccCCC-cc
Q 012213          265 GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGAS-EC  343 (468)
Q Consensus       265 gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~-~~  343 (468)
                      |+|.+++...  ..+++.++++++.|||.||+|||+.+   |+||||||+|||++.++.+||+|||+++.+...... ..
T Consensus        92 g~L~~~l~~~--~~l~~~~~~~i~~qi~~gl~ylH~~~---iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~  166 (277)
T d1xbba_          92 GPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA  166 (277)
T ss_dssp             EEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC
T ss_pred             CcHHHHHhhc--cCCCHHHHHHHHHHHHHHHhhHHhCC---cccCCCcchhhcccccCcccccchhhhhhcccccccccc
Confidence            9999999743  35999999999999999999999877   999999999999999999999999999876533222 22


Q ss_pred             ccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccccCCC
Q 012213          344 MSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQRLSN  422 (468)
Q Consensus       344 ~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  422 (468)
                      .....||+.|+|||.+.+..++.++|||||||++|||+| |+.||.+....  ++..              .+.......
T Consensus       167 ~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~--~~~~--------------~i~~~~~~~  230 (277)
T d1xbba_         167 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTA--------------MLEKGERMG  230 (277)
T ss_dssp             ----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHH--------------HHHTTCCCC
T ss_pred             ccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHH--HHHH--------------HHHcCCCCC
Confidence            334578999999999999999999999999999999998 89999763311  1111              111111222


Q ss_pred             CCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhc
Q 012213          423 TPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQA  459 (468)
Q Consensus       423 ~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~  459 (468)
                      .+...+.++.+++.+||+.||++||||+||+++|+..
T Consensus       231 ~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~  267 (277)
T d1xbba_         231 CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY  267 (277)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             CCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCH
Confidence            3334556788999999999999999999999998764


No 12 
>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.2e-53  Score=399.63  Aligned_cols=256  Identities=25%  Similarity=0.366  Sum_probs=205.7

Q ss_pred             hccCCcce-EcccCCcceEEEEcC---CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEE
Q 012213          182 ECVKDNNV-IGRGGAGVVYRGVTP---NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLL  257 (468)
Q Consensus       182 ~~~~~~~~-ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l  257 (468)
                      +++...+. ||+|+||+||+|.++   ++..||||+++... .....++|.+|++++++++|||||+++|++.+ +..++
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~-~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~~l   85 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALML   85 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEE
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhc-CHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeEEE
Confidence            34555564 999999999999864   35579999986432 22334679999999999999999999999875 46799


Q ss_pred             EEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccc
Q 012213          258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQD  337 (468)
Q Consensus       258 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~  337 (468)
                      ||||+++|+|.+++... ...+++..+.+++.|||.||+|||+.+   |+||||||+|||++.++.+||+|||+++.+..
T Consensus        86 vmE~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~ylH~~~---iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~  161 (285)
T d1u59a_          86 VMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGA  161 (285)
T ss_dssp             EEECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTT
T ss_pred             EEEeCCCCcHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCcCchhheeeccCCceeeccchhhhcccc
Confidence            99999999999998643 346899999999999999999999877   99999999999999999999999999997754


Q ss_pred             cCCC-ccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhhh
Q 012213          338 TGAS-ECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKI  415 (468)
Q Consensus       338 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  415 (468)
                      .... .......||+.|+|||++.+..++.++|||||||++|||+| |+.||.+....  ++..              .+
T Consensus       162 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~--~~~~--------------~i  225 (285)
T d1u59a_         162 DDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMA--------------FI  225 (285)
T ss_dssp             CSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HHHH--------------HH
T ss_pred             cccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHH--HHHH--------------HH
Confidence            3222 22234568999999999999999999999999999999998 99999764321  1111              11


Q ss_pred             ccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhc
Q 012213          416 LDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQA  459 (468)
Q Consensus       416 ~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~  459 (468)
                      ........+...+..+.+++..||+.||++||||.+|++.|+..
T Consensus       226 ~~~~~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~  269 (285)
T d1u59a_         226 EQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  269 (285)
T ss_dssp             HTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HcCCCCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            11112223344556788999999999999999999999999864


No 13 
>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.9e-53  Score=397.32  Aligned_cols=250  Identities=23%  Similarity=0.335  Sum_probs=206.3

Q ss_pred             hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEE
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY  259 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  259 (468)
                      .++|+..+.||+|+||+||+|.+ .+|+.||||++......  ..+.+.+|+.++++++|||||++++++.+++..++||
T Consensus        19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivm   96 (293)
T d1yhwa1          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM   96 (293)
T ss_dssp             TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCS--CHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccCh--HHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEE
Confidence            46789999999999999999997 46899999998644332  2367899999999999999999999999999999999


Q ss_pred             eccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccC
Q 012213          260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTG  339 (468)
Q Consensus       260 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~  339 (468)
                      ||+++|+|.+++...   .+++.++..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+|+.+....
T Consensus        97 Ey~~gg~L~~~~~~~---~l~~~~~~~i~~qi~~aL~yLH~~~---iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~  170 (293)
T d1yhwa1          97 EYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ  170 (293)
T ss_dssp             ECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred             EecCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCcHHHeEECCCCcEeeccchhheeecccc
Confidence            999999999988643   4899999999999999999999887   9999999999999999999999999998765322


Q ss_pred             CCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcccc
Q 012213          340 ASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQR  419 (468)
Q Consensus       340 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  419 (468)
                        .......||+.|+|||++.+..++.++|||||||++|||+||+.||.+....     +.........        ...
T Consensus       171 --~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~-----~~~~~~~~~~--------~~~  235 (293)
T d1yhwa1         171 --SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL-----RALYLIATNG--------TPE  235 (293)
T ss_dssp             --CCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH-----HHHHHHHHHC--------SCC
T ss_pred             --ccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHH-----HHHHHHHhCC--------CCC
Confidence              2335567999999999999999999999999999999999999999653211     1111000000        000


Q ss_pred             CCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213          420 LSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ  454 (468)
Q Consensus       420 ~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~  454 (468)
                       ...+......+.+++.+|++.||++|||+.|+++
T Consensus       236 -~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         236 -LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             -CSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             -CCCcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence             1112234566788999999999999999999986


No 14 
>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.9e-53  Score=407.36  Aligned_cols=257  Identities=26%  Similarity=0.430  Sum_probs=208.3

Q ss_pred             hhccCCcceEcccCCcceEEEEcCCC------cEEEEEEecccCCCCCchhHHHHHHHHHhCC-CCCCccceeEEEecCC
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVTPNG------EQVAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKE  253 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~------~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~  253 (468)
                      .++|+..+.||+|+||+||+|.+...      ..||||++..... ......+.+|+.++.++ +|||||++++++.+.+
T Consensus        36 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~  114 (325)
T d1rjba_          36 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKAD-SSEREALMSELKMMTQLGSHENIVNLLGACTLSG  114 (325)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccC-HHHHHHHHHHHHHHHHhcCCCcEeEEEEEEeeCC
Confidence            35678889999999999999987432      3699998865433 23336789999999988 8999999999999999


Q ss_pred             eeEEEEeccCCCChhhhcccCCC---------------------CCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCC
Q 012213          254 TNLLVYEYMPNGSLGEVLHGKRG---------------------SFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVK  312 (468)
Q Consensus       254 ~~~lv~e~~~~gsL~~~l~~~~~---------------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk  312 (468)
                      ..++||||+++|+|.++++....                     ..+++..++.++.||+.||+|||+.+   |+|||||
T Consensus       115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~---IiHRDlK  191 (325)
T d1rjba_         115 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLA  191 (325)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTCS
T ss_pred             eEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCc
Confidence            99999999999999999975432                     35899999999999999999999877   9999999


Q ss_pred             CCcEEEcCCCceEEeeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCC
Q 012213          313 SNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFG  391 (468)
Q Consensus       313 ~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~  391 (468)
                      |+|||++.++.+||+|||+|+...............||+.|+|||++.+..++.++|||||||++|||+| |+.||.+..
T Consensus       192 p~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~  271 (325)
T d1rjba_         192 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP  271 (325)
T ss_dssp             GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             hhccccccCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCC
Confidence            9999999999999999999988765444444456678999999999999999999999999999999998 899997643


Q ss_pred             CCCcCHHHHHHHhhcccccchhhhccccC-CCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHH
Q 012213          392 EEGLDIVQWTKMQTNSSKEGVVKILDQRL-SNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLA  457 (468)
Q Consensus       392 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~  457 (468)
                      ... .+.               +++.... ...+......+.+++.+||+.||++||||+||++.|.
T Consensus       272 ~~~-~~~---------------~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         272 VDA-NFY---------------KLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             CSH-HHH---------------HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHH-HHH---------------HHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence            221 111               1111111 1223344567889999999999999999999999985


No 15 
>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5e-53  Score=397.92  Aligned_cols=260  Identities=28%  Similarity=0.401  Sum_probs=201.1

Q ss_pred             hhccCCcceEcccCCcceEEEEcCCC-----cEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCee
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVTPNG-----EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETN  255 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~  255 (468)
                      .++|+..++||+|+||+||+|.++.+     ..||||++.... ......+|.+|+.++++++|||||+++|++.+.+..
T Consensus         6 ~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~~~   84 (283)
T d1mqba_           6 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY-TEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPM   84 (283)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred             HHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECccc-ChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCCce
Confidence            34577889999999999999987542     369999986432 223335689999999999999999999999999999


Q ss_pred             EEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccc
Q 012213          256 LLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYL  335 (468)
Q Consensus       256 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~  335 (468)
                      ++||||+++|++.+++... ...++|.++.+++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++.+
T Consensus        85 ~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~~i~~gl~~lH~~~---iiHrDlKp~NILl~~~~~~Kl~DFGla~~~  160 (283)
T d1mqba_          85 MIITEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVL  160 (283)
T ss_dssp             EEEEECCTTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC----
T ss_pred             EEEEEecccCcchhhhhcc-cccccHHHHHHHHHHHHHhhhhccccc---cccCccccceEEECCCCeEEEcccchhhcc
Confidence            9999999999999987643 346999999999999999999999877   999999999999999999999999999877


Q ss_pred             cccCC-CccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhh
Q 012213          336 QDTGA-SECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVK  414 (468)
Q Consensus       336 ~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (468)
                      ..... ........||+.|+|||++.+..++.++|||||||++|||+||..|+.....    ..+.           ...
T Consensus       161 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~----~~~~-----------~~~  225 (283)
T d1mqba_         161 EDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS----NHEV-----------MKA  225 (283)
T ss_dssp             -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC----HHHH-----------HHH
T ss_pred             cCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCC----HHHH-----------HHH
Confidence            53322 2223345689999999999999999999999999999999996655543111    1111           111


Q ss_pred             hccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213          415 ILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ  460 (468)
Q Consensus       415 ~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~  460 (468)
                      +.+......+...+..+.+++.+||+.||++||||.||+++|+++.
T Consensus       226 i~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~  271 (283)
T d1mqba_         226 INDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI  271 (283)
T ss_dssp             HHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             HhccCCCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHh
Confidence            1122222334445677889999999999999999999999998863


No 16 
>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=7.1e-53  Score=396.76  Aligned_cols=249  Identities=23%  Similarity=0.302  Sum_probs=203.5

Q ss_pred             hccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEe
Q 012213          182 ECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYE  260 (468)
Q Consensus       182 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  260 (468)
                      +.|+..+.||+|+||+||+|.+. +|+.||||++....  ....+.+.+|++++++++|||||++++++.+++..++|||
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmE   89 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS--EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIE   89 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSS--SGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEe
Confidence            45777889999999999999974 68899999986432  3334678999999999999999999999999999999999


Q ss_pred             ccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccCC
Q 012213          261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGA  340 (468)
Q Consensus       261 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  340 (468)
                      |+++|+|.+++... ...+++.++..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+|+.....  
T Consensus        90 y~~~g~L~~~~~~~-~~~l~e~~~~~i~~qi~~gL~ylH~~~---ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~--  163 (288)
T d2jfla1          90 FCAGGAVDAVMLEL-ERPLTESQIQVVCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT--  163 (288)
T ss_dssp             CCTTEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECHHH--
T ss_pred             cCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---EEEeecChhheeECCCCCEEEEechhhhccCCC--
Confidence            99999999987643 345899999999999999999999887   999999999999999999999999999765422  


Q ss_pred             CccccccccCccccCccccC-----CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhh
Q 012213          341 SECMSAVAGSYGYIAPEYAY-----TLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKI  415 (468)
Q Consensus       341 ~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  415 (468)
                      ........||+.|+|||++.     ...++.++|||||||++|||+||+.||.+.....  ..              .++
T Consensus       164 ~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~--~~--------------~~i  227 (288)
T d2jfla1         164 IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMR--VL--------------LKI  227 (288)
T ss_dssp             HHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGG--HH--------------HHH
T ss_pred             cccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHH--HH--------------HHH
Confidence            12234567999999999873     4568999999999999999999999997643211  11              111


Q ss_pred             cccc--CCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213          416 LDQR--LSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ  454 (468)
Q Consensus       416 ~d~~--~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~  454 (468)
                      ....  ....+......+.+++.+||+.||++|||++|+++
T Consensus       228 ~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         228 AKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             HHSCCCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HcCCCCCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            1111  11122334567888999999999999999999976


No 17 
>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=8.2e-53  Score=400.17  Aligned_cols=260  Identities=24%  Similarity=0.398  Sum_probs=212.2

Q ss_pred             hhccCCcceEcccCCcceEEEEcC------CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCe
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVTP------NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKET  254 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~  254 (468)
                      .++|+..+.||+|+||+||+|.++      +++.||||++.... .....++|.+|+.++++++||||++++++|.+.+.
T Consensus        12 ~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~   90 (301)
T d1lufa_          12 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-SADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP   90 (301)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred             HHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhc-ChHHHHHHHHHHHHHHhcCCCCcccceeeeccCCc
Confidence            567888999999999999999863      45789999986432 22334679999999999999999999999999999


Q ss_pred             eEEEEeccCCCChhhhcccCC----------------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCC
Q 012213          255 NLLVYEYMPNGSLGEVLHGKR----------------------GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVK  312 (468)
Q Consensus       255 ~~lv~e~~~~gsL~~~l~~~~----------------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk  312 (468)
                      .+++|||+++|+|.+++....                      ...+++..++.++.|+|.||+|||+.+   |+|||||
T Consensus        91 ~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~---ivHrDlK  167 (301)
T d1lufa_          91 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLA  167 (301)
T ss_dssp             CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCS
T ss_pred             eEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCC---eEeeEEc
Confidence            999999999999999986422                      224899999999999999999999877   9999999


Q ss_pred             CCcEEEcCCCceEEeeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCC-CCCCCCC
Q 012213          313 SNNILLNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGR-RPVGDFG  391 (468)
Q Consensus       313 ~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~-~p~~~~~  391 (468)
                      |+|||++.++.+||+|||+|+.+.............||+.|+|||.+.+..++.++|||||||++|||++|. +||.+..
T Consensus       168 p~NILld~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~  247 (301)
T d1lufa_         168 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA  247 (301)
T ss_dssp             GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred             ccceEECCCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCC
Confidence            999999999999999999998776444444445677899999999999999999999999999999999985 6776532


Q ss_pred             CCCcCHHHHHHHhhcccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213          392 EEGLDIVQWTKMQTNSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ  460 (468)
Q Consensus       392 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~  460 (468)
                      ..     +           ....+.+......+...+.++.+++..||+.+|++||||.||+++|+++.
T Consensus       248 ~~-----e-----------~~~~v~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         248 HE-----E-----------VIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             HH-----H-----------HHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             HH-----H-----------HHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            11     1           11122222223334445567889999999999999999999999999875


No 18 
>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.4e-53  Score=396.82  Aligned_cols=252  Identities=22%  Similarity=0.269  Sum_probs=203.0

Q ss_pred             hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCC-CCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITK-GSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV  258 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv  258 (468)
                      .++|+..+.||+|+||+||+|.+ .+|+.||||++..... .....+.+.+|++++++++||||+++++++.+++..++|
T Consensus         7 p~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~iv   86 (288)
T d1uu3a_           7 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG   86 (288)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEE
T ss_pred             CCCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEE
Confidence            35688899999999999999998 4689999999864321 223346789999999999999999999999999999999


Q ss_pred             EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213          259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT  338 (468)
Q Consensus       259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~  338 (468)
                      |||+++|+|.+++...  ..+++..+..++.|++.||+|||+.+   |+||||||+|||+++++.+||+|||+|+.+...
T Consensus        87 mEy~~gg~L~~~~~~~--~~l~e~~~~~~~~qi~~al~ylH~~~---iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~  161 (288)
T d1uu3a_          87 LSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPE  161 (288)
T ss_dssp             ECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECC--
T ss_pred             EEccCCCCHHHhhhcc--CCCCHHHHHHHHHHHHHHHHhhcccc---EEcCcCCccccccCCCceEEecccccceecccC
Confidence            9999999999998643  35899999999999999999999887   999999999999999999999999999987644


Q ss_pred             CCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccc
Q 012213          339 GASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQ  418 (468)
Q Consensus       339 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  418 (468)
                      ..........||+.|+|||++.+..++.++|||||||++|||+||+.||...+.     .+-.           .++...
T Consensus       162 ~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~-----~~~~-----------~~i~~~  225 (288)
T d1uu3a_         162 SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE-----YLIF-----------QKIIKL  225 (288)
T ss_dssp             --------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHH-----------HHHHTT
T ss_pred             CcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCH-----HHHH-----------HHHHcC
Confidence            444444567899999999999999999999999999999999999999975321     1100           111111


Q ss_pred             cCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213          419 RLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ  454 (468)
Q Consensus       419 ~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~  454 (468)
                      .. ..+......+.+++.+|++.||++|||++|++.
T Consensus       226 ~~-~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~~  260 (288)
T d1uu3a_         226 EY-DFPEKFFPKARDLVEKLLVLDATKRLGCEEMEG  260 (288)
T ss_dssp             CC-CCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGTC
T ss_pred             CC-CCCccCCHHHHHHHHHHccCCHhHCcCHHHHcC
Confidence            11 122233456788999999999999999998643


No 19 
>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.1e-52  Score=388.06  Aligned_cols=252  Identities=29%  Similarity=0.408  Sum_probs=200.8

Q ss_pred             hhccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEec-CCeeEEEE
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSN-KETNLLVY  259 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~  259 (468)
                      .++|+..+.||+|+||.||+|.++ |+.||||+++..    ...+.+.+|++++++++||||++++|+|.+ ++..++||
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~vAvK~i~~~----~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~   80 (262)
T d1byga_           6 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND----ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT   80 (262)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCC----C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEE
T ss_pred             HHHeEEeEEEecCCCeEEEEEEEC-CeEEEEEEECcH----HHHHHHHHHHHHHHhCCCCCEeeEEEEEEecCCcEEEEE
Confidence            456777899999999999999984 789999998532    233679999999999999999999999865 45679999


Q ss_pred             eccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccC
Q 012213          260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTG  339 (468)
Q Consensus       260 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~  339 (468)
                      ||+++|+|.+++.......++|..+++++.||+.||+|||+.+   |+||||||+||+++.++.+||+|||+++..... 
T Consensus        81 ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~-  156 (262)
T d1byga_          81 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-  156 (262)
T ss_dssp             CCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC--------
T ss_pred             eccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCc---eeccccchHhheecCCCCEeecccccceecCCC-
Confidence            9999999999997655456899999999999999999999877   999999999999999999999999999865422 


Q ss_pred             CCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccc
Q 012213          340 ASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQ  418 (468)
Q Consensus       340 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  418 (468)
                          .....+|..|+|||++.+..+++++||||||+++|||+| |++||......  ++..+.              ...
T Consensus       157 ----~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~--~~~~~i--------------~~~  216 (262)
T d1byga_         157 ----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRV--------------EKG  216 (262)
T ss_dssp             ---------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG--GHHHHH--------------TTT
T ss_pred             ----CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHH--HHHHHH--------------HcC
Confidence                234467899999999999999999999999999999998 78887653221  222221              111


Q ss_pred             cCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccC
Q 012213          419 RLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQK  461 (468)
Q Consensus       419 ~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~  461 (468)
                      .....+.....++.+++.+||+.||++||||.|++++|++++.
T Consensus       217 ~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~  259 (262)
T d1byga_         217 YKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT  259 (262)
T ss_dssp             CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             CCCCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHh
Confidence            1222333445678899999999999999999999999998763


No 20 
>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.5e-52  Score=386.51  Aligned_cols=249  Identities=28%  Similarity=0.402  Sum_probs=195.8

Q ss_pred             cCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEec----CCeeEEE
Q 012213          184 VKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSN----KETNLLV  258 (468)
Q Consensus       184 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv  258 (468)
                      ++..+.||+|+||+||+|.+. +++.||+|++..........+.+.+|++++++++|||||++++++.+    ....++|
T Consensus        11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~~~iv   90 (270)
T d1t4ha_          11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV   90 (270)
T ss_dssp             EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred             EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCCEEEEE
Confidence            345568999999999999985 58899999987654444445678999999999999999999999865    3457899


Q ss_pred             EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc-CCCceEEeeccccccccc
Q 012213          259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLN-SDFEAHVADFGLAKYLQD  337 (468)
Q Consensus       259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfgla~~~~~  337 (468)
                      |||+++|+|.+++...  ..+++..+..++.||+.||+|||+.+ ++|+||||||+|||++ +++.+||+|||+|+....
T Consensus        91 mE~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~gl~yLH~~~-~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~  167 (270)
T d1t4ha_          91 TELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA  167 (270)
T ss_dssp             EECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred             EeCCCCCcHHHHHhcc--ccccHHHHHHHHHHHHHHHHHHHHCC-CCEEeCCcChhhceeeCCCCCEEEeecCcceeccC
Confidence            9999999999999643  35899999999999999999999653 3499999999999997 478999999999986432


Q ss_pred             cCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcc
Q 012213          338 TGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILD  417 (468)
Q Consensus       338 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  417 (468)
                          .......||+.|+|||++.+ .++.++|||||||++|||+||+.||.+...    ............        .
T Consensus       168 ----~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~----~~~~~~~i~~~~--------~  230 (270)
T d1t4ha_         168 ----SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN----AAQIYRRVTSGV--------K  230 (270)
T ss_dssp             ----TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS----HHHHHHHHTTTC--------C
T ss_pred             ----CccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCccc----HHHHHHHHHcCC--------C
Confidence                22345689999999998865 699999999999999999999999975321    111111111000        0


Q ss_pred             ccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213          418 QRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ  454 (468)
Q Consensus       418 ~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~  454 (468)
                      +  ...+.....++.+++.+|++.||++|||++|+++
T Consensus       231 ~--~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         231 P--ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             C--GGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             C--cccCccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence            0  0011112345778999999999999999999975


No 21 
>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=7.1e-52  Score=393.52  Aligned_cols=254  Identities=23%  Similarity=0.325  Sum_probs=191.3

Q ss_pred             chhhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeE
Q 012213          178 DDILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNL  256 (468)
Q Consensus       178 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~  256 (468)
                      +++.+.|+..+.||+|+||+||+|.++ +|+.||||++....... ....+.+|+.++++++|||||++++++.+++..+
T Consensus         5 edi~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~-~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~   83 (307)
T d1a06a_           5 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEG-KEGSMENEIAVLHKIKHPNIVALDDIYESGGHLY   83 (307)
T ss_dssp             SCGGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC-----------CHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             CCCccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhh-HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            456677899999999999999999985 68899999986543322 2356889999999999999999999999999999


Q ss_pred             EEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc---CCCceEEeeccccc
Q 012213          257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLN---SDFEAHVADFGLAK  333 (468)
Q Consensus       257 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfgla~  333 (468)
                      +||||+++|+|.+++...  ..+++..+..++.||+.||+|||+.+   |+||||||+||++.   +++.+||+|||+|+
T Consensus        84 lvmE~~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~~---iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~  158 (307)
T d1a06a_          84 LIMQLVSGGELFDRIVEK--GFYTERDASRLIFQVLDAVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSK  158 (307)
T ss_dssp             EEECCCCSCBHHHHHHTC--SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCC----
T ss_pred             EEEeccCCCcHHHhhhcc--cCCCHHHHHHHHHHHHHHHHhhhhce---eeeEEecccceeecccCCCceEEEeccceeE
Confidence            999999999999999643  45999999999999999999999887   99999999999995   57899999999998


Q ss_pred             cccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchh
Q 012213          334 YLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVV  413 (468)
Q Consensus       334 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (468)
                      .....   .......||+.|+|||++.+..++.++|||||||++|||+||++||.+....  .+  +... ....     
T Consensus       159 ~~~~~---~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~--~~--~~~i-~~~~-----  225 (307)
T d1a06a_         159 MEDPG---SVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDA--KL--FEQI-LKAE-----  225 (307)
T ss_dssp             -----------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HH--HHHH-HTTC-----
T ss_pred             EccCC---CeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHH--HH--HHHH-hccC-----
Confidence            65422   2234567999999999999999999999999999999999999999753211  11  1111 0000     


Q ss_pred             hhccccC-CCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213          414 KILDQRL-SNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ  454 (468)
Q Consensus       414 ~~~d~~~-~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~  454 (468)
                          ... ..........+.+++.+|++.||++|||++|+++
T Consensus       226 ----~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  263 (307)
T d1a06a_         226 ----YEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ  263 (307)
T ss_dssp             ----CCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             ----CCCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence                000 1111233456788999999999999999999987


No 22 
>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.6e-52  Score=397.32  Aligned_cols=268  Identities=24%  Similarity=0.346  Sum_probs=205.6

Q ss_pred             hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEE
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVY  259 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~  259 (468)
                      .++|+..+.||+|+||+||+|.+. +|+.||+|+++... ......++.+|+.++++++|||||+++++|.+++..++||
T Consensus         5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~iVm   83 (322)
T d1s9ja_           5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM   83 (322)
T ss_dssp             GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCC-CTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhh-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            457888899999999999999974 68999999986533 2333467899999999999999999999999999999999


Q ss_pred             eccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhc-CCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213          260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHD-CSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT  338 (468)
Q Consensus       260 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~-~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~  338 (468)
                      ||+++|+|.+++...  ..+++..+..++.|++.||.|||+. +   |+||||||+|||+++++.+||+|||+|+.+...
T Consensus        84 Ey~~gg~L~~~l~~~--~~l~~~~~~~~~~qil~aL~yLH~~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~  158 (322)
T d1s9ja_          84 EHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS  158 (322)
T ss_dssp             ECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred             EcCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHhCC---EEccccCHHHeeECCCCCEEEeeCCCccccCCC
Confidence            999999999999643  3589999999999999999999974 6   999999999999999999999999999876532


Q ss_pred             CCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhh----------ccc
Q 012213          339 GASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQT----------NSS  408 (468)
Q Consensus       339 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~----------~~~  408 (468)
                      .    ....+||+.|+|||++.+..++.++||||+||++|||+||+.||...+..............          ...
T Consensus       159 ~----~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (322)
T d1s9ja_         159 M----ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPG  234 (322)
T ss_dssp             T----C---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC-------------------
T ss_pred             c----cccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCccccccc
Confidence            2    23568999999999999999999999999999999999999999763322110000000000          000


Q ss_pred             ------------c----cchhhhccccCCCCC-HHHHHHHHHHHHhhcccCCCCCCCHHHHHH--HHHh
Q 012213          409 ------------K----EGVVKILDQRLSNTP-LSEAMQVFFVAMLCVQEHGVERPTMREVVQ--MLAQ  458 (468)
Q Consensus       409 ------------~----~~~~~~~d~~~~~~~-~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~--~L~~  458 (468)
                                  .    +.............+ .....++.+++.+|++.||++|||++|+++  .+++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~  303 (322)
T d1s9ja_         235 RPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR  303 (322)
T ss_dssp             -----------CCCCHHHHHHHHHTSCCCCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHH
T ss_pred             ccccccccccccchhHHHHHhhhhccCCccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCc
Confidence                        0    000000000000111 112356788999999999999999999987  4543


No 23 
>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=9.1e-52  Score=392.86  Aligned_cols=249  Identities=28%  Similarity=0.340  Sum_probs=201.6

Q ss_pred             hhhhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCC-CchhHHHHHHHHHhCCCCCCccceeEEEecCCeeE
Q 012213          179 DILECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGS-SHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNL  256 (468)
Q Consensus       179 ~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~  256 (468)
                      +..+.|+..+.||+|+||+||+|.+ .+|+.||||++....... ...+.+.+|+.++++++|||||++++++.+++..+
T Consensus        12 dp~~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~   91 (309)
T d1u5ra_          12 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAW   91 (309)
T ss_dssp             CHHHHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred             CcHHhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEE
Confidence            4456688889999999999999987 468889999986543322 22356889999999999999999999999999999


Q ss_pred             EEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccc
Q 012213          257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQ  336 (468)
Q Consensus       257 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~  336 (468)
                      +||||+++|+|..++...  ..+++.++..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+|+...
T Consensus        92 iv~E~~~~g~l~~~~~~~--~~l~e~~~~~i~~qi~~aL~yLH~~~---iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~  166 (309)
T d1u5ra_          92 LVMEYCLGSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMA  166 (309)
T ss_dssp             EEEECCSEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSS
T ss_pred             EEEEecCCCchHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEECCCCCEEEeecccccccC
Confidence            999999999998766433  45899999999999999999999887   9999999999999999999999999998654


Q ss_pred             ccCCCccccccccCccccCccccCC---CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchh
Q 012213          337 DTGASECMSAVAGSYGYIAPEYAYT---LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVV  413 (468)
Q Consensus       337 ~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (468)
                      .      .....||+.|+|||++.+   ..|+.++|||||||++|||++|+.||.+...    ...+..           
T Consensus       167 ~------~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~----~~~~~~-----------  225 (309)
T d1u5ra_         167 P------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA----MSALYH-----------  225 (309)
T ss_dssp             S------BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH----HHHHHH-----------
T ss_pred             C------CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCH----HHHHHH-----------
Confidence            2      234579999999999854   4689999999999999999999999975321    111111           


Q ss_pred             hhccccC-CCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213          414 KILDQRL-SNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ  454 (468)
Q Consensus       414 ~~~d~~~-~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~  454 (468)
                       +..... ...+......+.+++.+||+.||++|||++|+++
T Consensus       226 -i~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         226 -IAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             -HHHSCCCCCSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             -HHhCCCCCCCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence             111111 1111223456888999999999999999999976


No 24 
>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.8e-51  Score=385.42  Aligned_cols=258  Identities=23%  Similarity=0.345  Sum_probs=197.8

Q ss_pred             hhccCCcceEcccCCcceEEEEcCC----CcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeE
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVTPN----GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNL  256 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~  256 (468)
                      .++|+..+.||+|+||.||+|.+..    +..||||++..... ....+.+.+|+.++++++|||||++++++. .+..+
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~   83 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTS-DSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW   83 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCE
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCeEE
Confidence            4578888999999999999998743    34688888754322 223457899999999999999999999986 46789


Q ss_pred             EEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccc
Q 012213          257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQ  336 (468)
Q Consensus       257 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~  336 (468)
                      +||||+++|+|.+++... ...+++..++.++.||+.||+|||+.+   |+||||||+||++++++.+||+|||+|+.+.
T Consensus        84 iv~E~~~~g~l~~~~~~~-~~~l~~~~~~~~~~qi~~gl~ylH~~~---iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~  159 (273)
T d1mp8a_          84 IIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYME  159 (273)
T ss_dssp             EEEECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC--------
T ss_pred             EEEEeccCCcHHhhhhcc-CCCCCHHHHHHHHHHHHHHhhhhcccC---eeccccchhheeecCCCcEEEccchhheecc
Confidence            999999999999987643 346899999999999999999999887   9999999999999999999999999998765


Q ss_pred             ccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhhh
Q 012213          337 DTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKI  415 (468)
Q Consensus       337 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  415 (468)
                      .. .........||+.|+|||.+.+..++.++|||||||++|||+| |.+||......  .+.              ..+
T Consensus       160 ~~-~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~--~~~--------------~~i  222 (273)
T d1mp8a_         160 DS-TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVI--------------GRI  222 (273)
T ss_dssp             ------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHH--------------HHH
T ss_pred             CC-cceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHH--HHH--------------HHH
Confidence            32 2223345678999999999999999999999999999999998 89999764321  111              111


Q ss_pred             ccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccC
Q 012213          416 LDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQK  461 (468)
Q Consensus       416 ~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~  461 (468)
                      ........+...+..+.+++..||+.||++|||++||++.|+++..
T Consensus       223 ~~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~  268 (273)
T d1mp8a_         223 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE  268 (273)
T ss_dssp             HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence            1222222333455678899999999999999999999999988743


No 25 
>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.4e-51  Score=392.70  Aligned_cols=256  Identities=25%  Similarity=0.411  Sum_probs=201.9

Q ss_pred             ccCCcceEcccCCcceEEEEcC-CCc----EEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEE
Q 012213          183 CVKDNNVIGRGGAGVVYRGVTP-NGE----QVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLL  257 (468)
Q Consensus       183 ~~~~~~~ig~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l  257 (468)
                      .|+..+.||+|+||+||+|.+. +|+    +||||++.... .....+.|.+|++++++++|||||+++|+|.++ ..++
T Consensus        10 dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~-~~~~   87 (317)
T d1xkka_          10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   87 (317)
T ss_dssp             TEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC-----CTHHHHHHHHHHHHHCCCTTBCCEEEEEESS-SEEE
T ss_pred             HCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-CeeE
Confidence            4778899999999999999874 343    58999886432 233446799999999999999999999999875 5678


Q ss_pred             EEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccc
Q 012213          258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQD  337 (468)
Q Consensus       258 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~  337 (468)
                      ++||+.+|+|.+++... ...+++..+++++.|||.||+|||+.+   |+||||||+|||++.++.+||+|||+|+.+..
T Consensus        88 v~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~gl~yLH~~~---iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~  163 (317)
T d1xkka_          88 ITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA  163 (317)
T ss_dssp             EEECCTTCBHHHHHHHT-SSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCCSHHHHTTT
T ss_pred             EEEeccCCccccccccc-ccCCCHHHHHHHHHHHHHHHHHHHHcC---cccCcchhhcceeCCCCCeEeeccccceeccc
Confidence            88999999999988743 456899999999999999999999877   99999999999999999999999999998764


Q ss_pred             cCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhhhc
Q 012213          338 TGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKIL  416 (468)
Q Consensus       338 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  416 (468)
                      ...........||+.|+|||++.+..++.++|||||||++|||+| |++||.+....  .+....              .
T Consensus       164 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~--~~~~~i--------------~  227 (317)
T d1xkka_         164 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSIL--------------E  227 (317)
T ss_dssp             TCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGG--GHHHHH--------------H
T ss_pred             ccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHH--HHHHHH--------------H
Confidence            444434445678999999999999999999999999999999999 89998764321  111111              1


Q ss_pred             cccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213          417 DQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ  460 (468)
Q Consensus       417 d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~  460 (468)
                      .......+......+.+++.+||+.||++|||+.||++.|+.+.
T Consensus       228 ~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~  271 (317)
T d1xkka_         228 KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA  271 (317)
T ss_dssp             HTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cCCCCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHH
Confidence            11112233445567889999999999999999999999988763


No 26 
>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}
Probab=100.00  E-value=2.7e-51  Score=396.21  Aligned_cols=256  Identities=22%  Similarity=0.333  Sum_probs=206.9

Q ss_pred             cchhhhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCee
Q 012213          177 SDDILECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETN  255 (468)
Q Consensus       177 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~  255 (468)
                      .+++.++|+..+.||+|+||+||+|.+ .+|+.||||++....  ....+.+.+|+.++++++|||||++++++.+.+..
T Consensus        21 ~~~il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~--~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~   98 (350)
T d1koaa2          21 HDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEM   98 (350)
T ss_dssp             CSCGGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCS--HHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEE
T ss_pred             CCCCccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccc--hhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEE
Confidence            345678899999999999999999997 468999999986432  22336788999999999999999999999999999


Q ss_pred             EEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC--CCceEEeeccccc
Q 012213          256 LLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS--DFEAHVADFGLAK  333 (468)
Q Consensus       256 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~--~~~~kl~Dfgla~  333 (468)
                      ++||||+++|+|.+++... ...+++..+..++.||+.||+|||+.+   |+||||||+|||++.  ++.+||+|||+++
T Consensus        99 ~ivmE~~~gg~L~~~l~~~-~~~l~e~~~~~i~~qi~~aL~ylH~~~---iiHrDiKp~NIll~~~~~~~vkL~DFG~a~  174 (350)
T d1koaa2          99 VMIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTA  174 (350)
T ss_dssp             EEEECCCCSCBHHHHHTCT-TSCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTSCCEEECCCTTCE
T ss_pred             EEEEEcCCCCCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcC---CeeeeechhHeeeccCCCCeEEEeecchhe
Confidence            9999999999999998643 345999999999999999999999888   999999999999964  5789999999998


Q ss_pred             cccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchh
Q 012213          334 YLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVV  413 (468)
Q Consensus       334 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  413 (468)
                      .+...   .......||+.|+|||++.+..++.++|||||||++|||+||+.||.+.+.     .+.......... .. 
T Consensus       175 ~~~~~---~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-----~~~~~~i~~~~~-~~-  244 (350)
T d1koaa2         175 HLDPK---QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND-----DETLRNVKSCDW-NM-  244 (350)
T ss_dssp             ECCTT---SCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHTCC-CS-
T ss_pred             ecccc---cccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCH-----HHHHHHHHhCCC-CC-
Confidence            76532   233456799999999999999999999999999999999999999975321     111111110000 00 


Q ss_pred             hhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213          414 KILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ  454 (468)
Q Consensus       414 ~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~  454 (468)
                         .   ..........+.+++.+|++.||++|||++|+++
T Consensus       245 ---~---~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  279 (350)
T d1koaa2         245 ---D---DSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE  279 (350)
T ss_dssp             ---C---CGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             ---C---cccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence               0   0011123456788999999999999999999987


No 27 
>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.2e-50  Score=385.96  Aligned_cols=256  Identities=29%  Similarity=0.411  Sum_probs=203.1

Q ss_pred             cceEcccCCcceEEEEcCCC----cEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEec-CCeeEEEEec
Q 012213          187 NNVIGRGGAGVVYRGVTPNG----EQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSN-KETNLLVYEY  261 (468)
Q Consensus       187 ~~~ig~G~~g~Vy~~~~~~~----~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e~  261 (468)
                      .++||+|+||+||+|.+.++    ..||||++.... .....++|.+|++++++++||||++++|++.+ +...++||||
T Consensus        32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~E~  110 (311)
T d1r0pa_          32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY  110 (311)
T ss_dssp             EEEEEEETTEEEEEEEECC----CEEEEEEEECCCC-CHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEEEC
T ss_pred             ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECccc-CHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEEEE
Confidence            47899999999999997542    258999986432 23334679999999999999999999999875 5578999999


Q ss_pred             cCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccCCC
Q 012213          262 MPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGAS  341 (468)
Q Consensus       262 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~  341 (468)
                      +++|+|.++++. ....+++..+++++.|+|.||.|||+.+   |+||||||+|||+++++.+||+|||+++........
T Consensus       111 ~~~g~l~~~~~~-~~~~~~~~~~~~i~~qia~gL~~lH~~~---iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~  186 (311)
T d1r0pa_         111 MKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD  186 (311)
T ss_dssp             CTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCC
T ss_pred             eecCchhhhhcc-ccccchHHHHHHHHHHHHHhhhhhcccC---cccCCccHHhEeECCCCCEEEecccchhhccccccc
Confidence            999999999874 3445788999999999999999999877   999999999999999999999999999876533222


Q ss_pred             --ccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhcccc
Q 012213          342 --ECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQR  419 (468)
Q Consensus       342 --~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~  419 (468)
                        .......||+.|+|||.+.+..++.++||||||+++|||+||..||...... .++..+              +....
T Consensus       187 ~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~-~~~~~~--------------i~~g~  251 (311)
T d1r0pa_         187 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-FDITVY--------------LLQGR  251 (311)
T ss_dssp             CTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC-------CHHH--------------HHTTC
T ss_pred             cceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCH-HHHHHH--------------HHcCC
Confidence              2233457899999999999999999999999999999999988887542211 111111              11111


Q ss_pred             CCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCC
Q 012213          420 LSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKP  462 (468)
Q Consensus       420 ~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~  462 (468)
                      ....+......+.+++.+||+.||++||+|.||++.|+++...
T Consensus       252 ~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~  294 (311)
T d1r0pa_         252 RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST  294 (311)
T ss_dssp             CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             CCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence            1222233456788899999999999999999999999988644


No 28 
>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.7e-50  Score=379.56  Aligned_cols=256  Identities=21%  Similarity=0.272  Sum_probs=206.2

Q ss_pred             chhhhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCC----CchhHHHHHHHHHhCCCCCCccceeEEEecC
Q 012213          178 DDILECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGS----SHDNGLSAEIRTLGKIRHRNIVRLKAFCSNK  252 (468)
Q Consensus       178 ~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~  252 (468)
                      +++.+.|+..+.||+|+||+||+|.+ .+|+.||||++.......    ...+.+.+|+.++++++|||||++++++.++
T Consensus         6 ~~i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~   85 (293)
T d1jksa_           6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENK   85 (293)
T ss_dssp             SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred             CCcccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence            44567789999999999999999998 468999999986543322    2346789999999999999999999999999


Q ss_pred             CeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC----ceEEee
Q 012213          253 ETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF----EAHVAD  328 (468)
Q Consensus       253 ~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~D  328 (468)
                      +..++||||+++|+|.+++...  ..+++..+..++.||+.||+|||+.+   |+||||||+||+++.++    .+|++|
T Consensus        86 ~~~~iv~E~~~gg~L~~~i~~~--~~l~~~~~~~~~~qi~~al~yLH~~~---ivHrDiKp~Nill~~~~~~~~~vkl~D  160 (293)
T d1jksa_          86 TDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIID  160 (293)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCSSSSSCCEEECC
T ss_pred             CEEEEEEEcCCCccccchhccc--cccchhHHHHHHHHHHHHHHhhhhcc---eeecccccceEEEecCCCcccceEecc
Confidence            9999999999999999999643  35999999999999999999999887   99999999999998876    499999


Q ss_pred             ccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhccc
Q 012213          329 FGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSS  408 (468)
Q Consensus       329 fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~  408 (468)
                      ||++......   .......||+.|+|||++.+..++.++|||||||++|||+||+.||.+....    ..+... ....
T Consensus       161 fG~a~~~~~~---~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~----~~~~~i-~~~~  232 (293)
T d1jksa_         161 FGLAHKIDFG---NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ----ETLANV-SAVN  232 (293)
T ss_dssp             CTTCEECTTS---CBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHH-HTTC
T ss_pred             hhhhhhcCCC---ccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHH----HHHHHH-HhcC
Confidence            9999876532   2234567899999999999999999999999999999999999999753211    001111 0000


Q ss_pred             ccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213          409 KEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ  454 (468)
Q Consensus       409 ~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~  454 (468)
                      . .....       .+......+.+++.+|++.||++|||++|+++
T Consensus       233 ~-~~~~~-------~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         233 Y-EFEDE-------YFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             C-CCCHH-------HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             C-CCCch-------hcCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            0 00000       00112356778999999999999999999986


No 29 
>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}
Probab=100.00  E-value=7.6e-51  Score=393.31  Aligned_cols=254  Identities=20%  Similarity=0.295  Sum_probs=206.8

Q ss_pred             chhhhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeE
Q 012213          178 DDILECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNL  256 (468)
Q Consensus       178 ~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~  256 (468)
                      ..+.+.|+..+.||+|+||+||+|.+ .+|+.||||++....  ......+.+|+.++++++|||||++++++.+++..+
T Consensus        25 ~~~~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~  102 (352)
T d1koba_          25 GSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY--PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMV  102 (352)
T ss_dssp             SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEE
T ss_pred             CCcccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcc--hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            34567799999999999999999997 469999999986432  222356889999999999999999999999999999


Q ss_pred             EEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEc--CCCceEEeecccccc
Q 012213          257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLN--SDFEAHVADFGLAKY  334 (468)
Q Consensus       257 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~--~~~~~kl~Dfgla~~  334 (468)
                      +||||+++|+|.+++.. ....+++.++..++.||+.||+|||+.+   |+||||||+|||++  .++.+||+|||+|+.
T Consensus       103 ivmE~~~gg~L~~~~~~-~~~~l~e~~~~~i~~qi~~aL~ylH~~~---iiHRDiKp~NILl~~~~~~~vkL~DFGla~~  178 (352)
T d1koba_         103 LILEFLSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATK  178 (352)
T ss_dssp             EEEECCCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEE
T ss_pred             EEEEcCCCChHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccccccccccccCCCeEEEeeccccee
Confidence            99999999999988753 3446999999999999999999999888   99999999999998  578999999999987


Q ss_pred             ccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhh
Q 012213          335 LQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVK  414 (468)
Q Consensus       335 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (468)
                      +...   .......||+.|+|||++.+..++.++|||||||++|||+||+.||.+....  ....  .. ...       
T Consensus       179 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~--~~~~--~i-~~~-------  243 (352)
T d1koba_         179 LNPD---EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL--ETLQ--NV-KRC-------  243 (352)
T ss_dssp             CCTT---SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH--HHHH--HH-HHC-------
T ss_pred             cCCC---CceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH--HHHH--HH-HhC-------
Confidence            7532   2234567899999999999999999999999999999999999999753211  1110  10 000       


Q ss_pred             hccccC-CCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213          415 ILDQRL-SNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ  454 (468)
Q Consensus       415 ~~d~~~-~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~  454 (468)
                        +... ..........+.+++.+|++.||++|||++|+++
T Consensus       244 --~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  282 (352)
T d1koba_         244 --DWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE  282 (352)
T ss_dssp             --CCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             --CCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence              0001 1111234456788999999999999999999976


No 30 
>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.4e-51  Score=383.79  Aligned_cols=259  Identities=26%  Similarity=0.367  Sum_probs=196.9

Q ss_pred             hccCCcceEcccCCcceEEEEcC--CC--cEEEEEEecccCCC-CCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeE
Q 012213          182 ECVKDNNVIGRGGAGVVYRGVTP--NG--EQVAVKKLLGITKG-SSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNL  256 (468)
Q Consensus       182 ~~~~~~~~ig~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~  256 (468)
                      ++|+..+.||+|+||.||+|.+.  ++  ..||||++...... ....+.|.+|+.++++++||||++++|++.+ ...+
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~-~~~~   86 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT-PPMK   86 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCE
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-cchh
Confidence            45778889999999999999863  22  36899988654332 2334679999999999999999999999976 4678


Q ss_pred             EEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccc
Q 012213          257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQ  336 (468)
Q Consensus       257 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~  336 (468)
                      +||||+++|++.+++... ...+++..+++++.|||.||.|||+.+   |+||||||+||+++.++.+||+|||+++.+.
T Consensus        87 lv~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~gl~ylH~~~---iiHrDikp~NIll~~~~~vkl~DfGl~~~~~  162 (273)
T d1u46a_          87 MVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRALP  162 (273)
T ss_dssp             EEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred             eeeeeecCcchhhhhhcc-cCCCCHHHHHHHHHHHHHHHHHhhhCC---EeeeeecHHHhccccccceeeccchhhhhcc
Confidence            999999999999988643 345999999999999999999999877   9999999999999999999999999999875


Q ss_pred             ccCCCc-cccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcCHHHHHHHhhcccccchhh
Q 012213          337 DTGASE-CMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVK  414 (468)
Q Consensus       337 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (468)
                      ...... ......|+..|+|||.+.+..++.++||||||+++|||+| |+.||.+.+..  ....+.   ....      
T Consensus       163 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~--~~~~~i---~~~~------  231 (273)
T d1u46a_         163 QNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS--QILHKI---DKEG------  231 (273)
T ss_dssp             C-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHH---HTSC------
T ss_pred             cCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCHH--HHHHHH---HhCC------
Confidence            433322 2234567889999999999999999999999999999998 89999753311  111111   1110      


Q ss_pred             hccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213          415 ILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ  460 (468)
Q Consensus       415 ~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~  460 (468)
                          .....+...+..+.+++.+||+.||++||||+||.++|++++
T Consensus       232 ----~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~~  273 (273)
T d1u46a_         232 ----ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ  273 (273)
T ss_dssp             ----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             ----CCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcC
Confidence                011222334467889999999999999999999999999864


No 31 
>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.4e-51  Score=388.49  Aligned_cols=263  Identities=24%  Similarity=0.363  Sum_probs=215.4

Q ss_pred             hhccCCcceEcccCCcceEEEEcC------CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCe
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVTP------NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKET  254 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~  254 (468)
                      .++|+..+.||+|+||+||+|.++      +++.||||+++... .......|.+|+.++++++||||++++++|...+.
T Consensus        19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~-~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~   97 (308)
T d1p4oa_          19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   97 (308)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS-CHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSS
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECccc-ChHHHHHHHHHHHHHHHcCCCCEeeeeeEEecCCc
Confidence            467788899999999999999873      35789999986432 22233568999999999999999999999999999


Q ss_pred             eEEEEeccCCCChhhhcccCC--------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEE
Q 012213          255 NLLVYEYMPNGSLGEVLHGKR--------GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHV  326 (468)
Q Consensus       255 ~~lv~e~~~~gsL~~~l~~~~--------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl  326 (468)
                      .++||||+++|+|.+++....        ...+++..+.+++.|+|+||.|||+.+   |+||||||+|||+++++++||
T Consensus        98 ~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~---ivHrDlk~~NiLld~~~~~Kl  174 (308)
T d1p4oa_          98 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKI  174 (308)
T ss_dssp             CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECTTCCEEE
T ss_pred             eeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeeceEcCCceeecCCceEEE
Confidence            999999999999999986422        235789999999999999999999877   999999999999999999999


Q ss_pred             eeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhC-CCCCCCCCCCCcCHHHHHHHhh
Q 012213          327 ADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITG-RRPVGDFGEEGLDIVQWTKMQT  405 (468)
Q Consensus       327 ~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg-~~p~~~~~~~~~~~~~~~~~~~  405 (468)
                      +|||+++.+.............||+.|+|||.+.+..++.++||||||+++|||+|| ++||.+..     ..++     
T Consensus       175 ~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~-----~~~~-----  244 (308)
T d1p4oa_         175 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS-----NEQV-----  244 (308)
T ss_dssp             CCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC-----HHHH-----
T ss_pred             eecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCC-----HHHH-----
Confidence            999999987654444444556789999999999999999999999999999999998 47775432     1111     


Q ss_pred             cccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCCC
Q 012213          406 NSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKPN  463 (468)
Q Consensus       406 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~~  463 (468)
                            ...+.+......+......+.+++.+||+.+|++||||+||+++|++...+.
T Consensus       245 ------~~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~  296 (308)
T d1p4oa_         245 ------LRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPG  296 (308)
T ss_dssp             ------HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTT
T ss_pred             ------HHHHHhCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence                  1222233333334445567899999999999999999999999999876554


No 32 
>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.3e-50  Score=384.88  Aligned_cols=261  Identities=26%  Similarity=0.372  Sum_probs=198.8

Q ss_pred             hhccCCcceEcccCCcceEEEEcC------CCcEEEEEEecccCCCCCchhHHHHHHHHHhCC-CCCCccceeEEEecCC
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVTP------NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKE  253 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~  253 (468)
                      .++|+..+.||+|+||.||+|.+.      +++.||||+++.... ......+..|+..+.++ +|+||+.+++++...+
T Consensus        12 ~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~-~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~   90 (299)
T d1ywna1          12 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-HSEHRALMSELKILIHIGHHLNVVNLLGACTKPG   90 (299)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----C-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred             HHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccC-cHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccCC
Confidence            456888899999999999999863      346899999864322 22235677788877776 6899999999987654


Q ss_pred             -eeEEEEeccCCCChhhhcccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEE
Q 012213          254 -TNLLVYEYMPNGSLGEVLHGKR--------------GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILL  318 (468)
Q Consensus       254 -~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill  318 (468)
                       ..++||||+++|+|.++++...              ...+++.++..++.||+.||+|||+.+   |+||||||+|||+
T Consensus        91 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~---ivHrDlKp~NILl  167 (299)
T d1ywna1          91 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILL  167 (299)
T ss_dssp             SCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEE
T ss_pred             CeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCC---CcCCcCCccceeE
Confidence             5799999999999999996542              235899999999999999999999877   9999999999999


Q ss_pred             cCCCceEEeeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhC-CCCCCCCCCCCcCH
Q 012213          319 NSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITG-RRPVGDFGEEGLDI  397 (468)
Q Consensus       319 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg-~~p~~~~~~~~~~~  397 (468)
                      ++++.+||+|||+|+...............||+.|+|||.+.+..++.++|||||||++|||+|| .+||....... .+
T Consensus       168 ~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~-~~  246 (299)
T d1ywna1         168 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EF  246 (299)
T ss_dssp             CGGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH-HH
T ss_pred             CCCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHH-HH
Confidence            99999999999999877644444445567899999999999999999999999999999999996 56776533211 11


Q ss_pred             HHHHHHhhcccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213          398 VQWTKMQTNSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ  460 (468)
Q Consensus       398 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~  460 (468)
                      ....              .+......+.....++.+++.+||+.||++|||++||++.|+++-
T Consensus       247 ~~~~--------------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~il  295 (299)
T d1ywna1         247 CRRL--------------KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  295 (299)
T ss_dssp             HHHH--------------HHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHH--------------hcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            1110              011112223334567889999999999999999999999999874


No 33 
>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.6e-50  Score=383.74  Aligned_cols=260  Identities=25%  Similarity=0.395  Sum_probs=207.7

Q ss_pred             hhccCCcceEcccCCcceEEEEcCC--------CcEEEEEEecccCCCCCchhHHHHHHHHHhCC-CCCCccceeEEEec
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVTPN--------GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSN  251 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~  251 (468)
                      .+.|+..+.||+|+||.||+|+...        +..||||+++.... .....++.+|+..+.++ +|||||+++++|.+
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~   90 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDAT-EKDLSDLISEMEMMKMIGKHKNIINLLGACTQ   90 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccC-hHHHHHHHHHHHHHHHhcCCCeEEeccccccc
Confidence            4677888999999999999998632        34799999864322 22336688898888888 89999999999999


Q ss_pred             CCeeEEEEeccCCCChhhhcccCC--------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEE
Q 012213          252 KETNLLVYEYMPNGSLGEVLHGKR--------------GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNIL  317 (468)
Q Consensus       252 ~~~~~lv~e~~~~gsL~~~l~~~~--------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nil  317 (468)
                      ++..++||||+++|+|.+++....              ...+++.++++++.||+.||+|||+.+   |+||||||+|||
T Consensus        91 ~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~---ivHrDiKp~NiL  167 (299)
T d1fgka_          91 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVL  167 (299)
T ss_dssp             SSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEE
T ss_pred             CCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCC---EEeeeeccccee
Confidence            999999999999999999997543              235899999999999999999999887   999999999999


Q ss_pred             EcCCCceEEeeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcC
Q 012213          318 LNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLD  396 (468)
Q Consensus       318 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~  396 (468)
                      ++.++.+||+|||+++...............||+.|+|||.+.+..+++++||||||+++|||+| |++||.+....  .
T Consensus       168 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~--~  245 (299)
T d1fgka_         168 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVE--E  245 (299)
T ss_dssp             ECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--H
T ss_pred             ecCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCCHH--H
Confidence            99999999999999998875555555566789999999999999999999999999999999998 78888653311  1


Q ss_pred             HHHHHHHhhcccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213          397 IVQWTKMQTNSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ  460 (468)
Q Consensus       397 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~  460 (468)
                      +..+              +.+......+......+.+++.+||+.||++|||+.||+++|+++.
T Consensus       246 ~~~~--------------i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~  295 (299)
T d1fgka_         246 LFKL--------------LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV  295 (299)
T ss_dssp             HHHH--------------HHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHH--------------HHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHh
Confidence            1111              1111112223334567889999999999999999999999999874


No 34 
>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.9e-50  Score=383.75  Aligned_cols=258  Identities=26%  Similarity=0.396  Sum_probs=204.7

Q ss_pred             hhccCCcceEcccCCcceEEEEcCC-Cc--EEEEEEecccCCCCCchhHHHHHHHHHhCC-CCCCccceeEEEecCCeeE
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVTPN-GE--QVAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKETNL  256 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~--~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~  256 (468)
                      .++|+..+.||+|+||+||+|.+++ |.  .||||++...... ...+.|.+|+++++++ +|||||+++|+|.+++..+
T Consensus         9 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~   87 (309)
T d1fvra_           9 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK-DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY   87 (309)
T ss_dssp             GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEE
T ss_pred             HHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccCh-HHHHHHHHHHHHHHhccCCCCEeeEEEEEecCCeeE
Confidence            4567788999999999999999854 33  4788887543322 2335799999999998 7999999999999999999


Q ss_pred             EEEeccCCCChhhhcccC--------------CCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC
Q 012213          257 LVYEYMPNGSLGEVLHGK--------------RGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF  322 (468)
Q Consensus       257 lv~e~~~~gsL~~~l~~~--------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~  322 (468)
                      +||||+++|+|.++++..              ....+++..+++++.|||.||.|||+.+   |+||||||+|||++.++
T Consensus        88 iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~---iiHrDlkp~NIL~~~~~  164 (309)
T d1fvra_          88 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENY  164 (309)
T ss_dssp             EEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGG
T ss_pred             EEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCC---ccccccccceEEEcCCC
Confidence            999999999999999643              2357999999999999999999999877   99999999999999999


Q ss_pred             ceEEeeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCC-CCCCCCCCCCcCHHHHH
Q 012213          323 EAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGR-RPVGDFGEEGLDIVQWT  401 (468)
Q Consensus       323 ~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~-~p~~~~~~~~~~~~~~~  401 (468)
                      .+||+|||+++......   ......||..|+|||.+.+..++.++|||||||++|||++|. +||.+.+     ..+..
T Consensus       165 ~~kl~DfG~a~~~~~~~---~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~-----~~~~~  236 (309)
T d1fvra_         165 VAKIADFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT-----CAELY  236 (309)
T ss_dssp             CEEECCTTCEESSCEEC---CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHHH
T ss_pred             ceEEccccccccccccc---cccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCC-----HHHHH
Confidence            99999999998654222   223456899999999999999999999999999999999965 5665432     11111


Q ss_pred             HHhhcccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccC
Q 012213          402 KMQTNSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQK  461 (468)
Q Consensus       402 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~  461 (468)
                                 ..+........+......+.+++.+||+.||++||||+||++.|+++..
T Consensus       237 -----------~~i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~  285 (309)
T d1fvra_         237 -----------EKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLE  285 (309)
T ss_dssp             -----------HHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             -----------HHHHhcCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHh
Confidence                       1111111222334455678899999999999999999999999988753


No 35 
>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=8.4e-51  Score=386.07  Aligned_cols=271  Identities=27%  Similarity=0.328  Sum_probs=202.3

Q ss_pred             hccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCC----eeEE
Q 012213          182 ECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKE----TNLL  257 (468)
Q Consensus       182 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~~l  257 (468)
                      +.+...+.||+|+||+||+|++ +|+.||||++....   .....++.|+..+..++||||++++++|.+.+    ..++
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~-~g~~vAvK~~~~~~---~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~~~~~~~~l   78 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc---hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCCCcceEEEE
Confidence            4556678899999999999987 68999999985322   11122344555667789999999999997654    5789


Q ss_pred             EEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcC-----CCCeeecCCCCCcEEEcCCCceEEeecccc
Q 012213          258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDC-----SPLIIHRDVKSNNILLNSDFEAHVADFGLA  332 (468)
Q Consensus       258 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-----~~~ivH~dlk~~Nill~~~~~~kl~Dfgla  332 (468)
                      ||||+++|+|.++++..   .++|..+++++.++|.||+|||..+     .++|+||||||+|||++.++.+||+|||++
T Consensus        79 v~Ey~~~g~L~~~l~~~---~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~  155 (303)
T d1vjya_          79 VSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA  155 (303)
T ss_dssp             EEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred             EEecccCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCcc
Confidence            99999999999999753   4899999999999999999999641     345999999999999999999999999999


Q ss_pred             ccccccCCC--ccccccccCccccCccccCCCC------CCcchhhHHHHHHHHHHHhCCCCCCCCCCCCc---------
Q 012213          333 KYLQDTGAS--ECMSAVAGSYGYIAPEYAYTLK------VDEKSDVYSFGVVLLELITGRRPVGDFGEEGL---------  395 (468)
Q Consensus       333 ~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~------~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~---------  395 (468)
                      +.+......  .......||+.|+|||++....      ++.++|||||||++|||+||..|+........         
T Consensus       156 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~  235 (303)
T d1vjya_         156 VRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD  235 (303)
T ss_dssp             EEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSS
T ss_pred             ccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhccccc
Confidence            887543322  1234567999999999987542      67899999999999999999988754221111         


Q ss_pred             -CHHHHHHHhhcccccchhhhccccCCC--CCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhccCCCCcc
Q 012213          396 -DIVQWTKMQTNSSKEGVVKILDQRLSN--TPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQKPNTFQ  466 (468)
Q Consensus       396 -~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~~~~~~~  466 (468)
                       ......... .      ....++.+..  ...+....+.+++.+||+.||++||||.||++.|+++...+..+
T Consensus       236 ~~~~~~~~~~-~------~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~~~~~  302 (303)
T d1vjya_         236 PSVEEMRKVV-C------EQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQEGIK  302 (303)
T ss_dssp             CCHHHHHHHH-T------TSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHHHCCC
T ss_pred             chHHHHHHHH-h------ccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHhcCCC
Confidence             111111110 0      1111111111  12345667889999999999999999999999999987655444


No 36 
>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.3e-50  Score=384.21  Aligned_cols=250  Identities=24%  Similarity=0.284  Sum_probs=206.0

Q ss_pred             hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCC-CCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITK-GSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV  258 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv  258 (468)
                      .++|+..+.||+|+||.||+|.+ .+|+.||||++..... .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~iv   83 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV   83 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeeccccccccc
Confidence            45788899999999999999997 5789999999864321 223346788999999999999999999999999999999


Q ss_pred             EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213          259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT  338 (468)
Q Consensus       259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~  338 (468)
                      |||+++|+|.+++...  ..+++..+..++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+|+.....
T Consensus        84 ~ey~~gg~L~~~~~~~--~~~~e~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~  158 (337)
T d1o6la_          84 MEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISD  158 (337)
T ss_dssp             EECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT
T ss_pred             eeccCCCchhhhhhcc--cCCcHHHHHHHHHHHhhhhhhhhhcC---ccccccCHHHeEecCCCCEEEeecccccccccC
Confidence            9999999999998743  35899999999999999999999887   999999999999999999999999999865422


Q ss_pred             CCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccc
Q 012213          339 GASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQ  418 (468)
Q Consensus       339 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  418 (468)
                        .......+||+.|+|||++.+..++.++||||+||++|||++|++||.+.+..     .....           +...
T Consensus       159 --~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~-----~~~~~-----------i~~~  220 (337)
T d1o6la_         159 --GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-----RLFEL-----------ILME  220 (337)
T ss_dssp             --TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHH-----------HHHC
T ss_pred             --CcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHH-----HHHHH-----------HhcC
Confidence              22345678999999999999999999999999999999999999999763311     11111           1111


Q ss_pred             cCCCCCHHHHHHHHHHHHhhcccCCCCCCC-----HHHHHH
Q 012213          419 RLSNTPLSEAMQVFFVAMLCVQEHGVERPT-----MREVVQ  454 (468)
Q Consensus       419 ~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt-----~~ev~~  454 (468)
                      . ...+.....++.+++..|++.||++||+     ++|+++
T Consensus       221 ~-~~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         221 E-IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             C-CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             C-CCCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHc
Confidence            1 1122334556788999999999999995     788875


No 37 
>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=2.2e-50  Score=385.04  Aligned_cols=260  Identities=26%  Similarity=0.410  Sum_probs=211.8

Q ss_pred             hhccCCcceEcccCCcceEEEEc------CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCC-CCCCccceeEEEecCC
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVT------PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKI-RHRNIVRLKAFCSNKE  253 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~  253 (468)
                      .+.|+..+.||+|+||.||+|++      .+++.||||+++.... ......+.+|+.+++++ +|||||+++++|.+++
T Consensus        22 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~-~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~~~  100 (311)
T d1t46a_          22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNHMNIVNLLGACTIGG  100 (311)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCC-HHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred             HHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccC-HHHHHHHHHHHHHHHhccCCCCEEEEEEEEeeCC
Confidence            45677889999999999999975      3467899999875432 23345688999999998 6999999999999999


Q ss_pred             eeEEEEeccCCCChhhhcccCC----------------CCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEE
Q 012213          254 TNLLVYEYMPNGSLGEVLHGKR----------------GSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNIL  317 (468)
Q Consensus       254 ~~~lv~e~~~~gsL~~~l~~~~----------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nil  317 (468)
                      ..++||||+++|+|.++++...                ...+++..+.+++.||+.||+|||+.+   ++||||||+||+
T Consensus       101 ~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~---ivHrDLKp~NIl  177 (311)
T d1t46a_         101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNIL  177 (311)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEE
T ss_pred             EEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccccccccc
Confidence            9999999999999999986543                225899999999999999999999887   999999999999


Q ss_pred             EcCCCceEEeeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHh-CCCCCCCCCCCCcC
Q 012213          318 LNSDFEAHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELIT-GRRPVGDFGEEGLD  396 (468)
Q Consensus       318 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~ellt-g~~p~~~~~~~~~~  396 (468)
                      ++.++.+|++|||+++...............||+.|+|||.+.+..++.++|||||||++|||+| |.+||...... ..
T Consensus       178 ~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~-~~  256 (311)
T d1t46a_         178 LTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-SK  256 (311)
T ss_dssp             EETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS-HH
T ss_pred             ccccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHH-HH
Confidence            99999999999999998765444445556789999999999999999999999999999999999 55555443321 11


Q ss_pred             HHHHHHHhhcccccchhhhccccC-CCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhcc
Q 012213          397 IVQWTKMQTNSSKEGVVKILDQRL-SNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQAQ  460 (468)
Q Consensus       397 ~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~~  460 (468)
                      +.               ++++... ...+......+.+++.+||+.||++||||+||+++|+++.
T Consensus       257 ~~---------------~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i  306 (311)
T d1t46a_         257 FY---------------KMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI  306 (311)
T ss_dssp             HH---------------HHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HH---------------HHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhh
Confidence            11               1111111 1222334567889999999999999999999999998753


No 38 
>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=1e-49  Score=380.09  Aligned_cols=247  Identities=26%  Similarity=0.323  Sum_probs=203.7

Q ss_pred             hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCC-CCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITK-GSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV  258 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv  258 (468)
                      .++|+..+.||+|+||+||+|++ .+|+.||||++..... .....+.+.+|+.+++.++|||||++++++.+++..++|
T Consensus         3 l~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv   82 (316)
T d1fota_           3 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI   82 (316)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hhHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeE
Confidence            45688889999999999999997 4689999999864321 223346789999999999999999999999999999999


Q ss_pred             EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213          259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT  338 (468)
Q Consensus       259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~  338 (468)
                      |||+++|+|.+++....  .+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+|+.....
T Consensus        83 mE~~~gg~l~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~~---iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~  157 (316)
T d1fota_          83 MDYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPDV  157 (316)
T ss_dssp             ECCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSSC
T ss_pred             eeecCCccccccccccc--cccccHHHHHHHHHHHhhhhhccCc---EEccccCchheeEcCCCCEEEecCccceEeccc
Confidence            99999999999886443  4788999999999999999999777   999999999999999999999999999876422


Q ss_pred             CCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccc
Q 012213          339 GASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQ  418 (468)
Q Consensus       339 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  418 (468)
                           .....||+.|+|||++.+..++.++|||||||++|||+||+.||.+.+.     .+..           ..+...
T Consensus       158 -----~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~-----~~~~-----------~~i~~~  216 (316)
T d1fota_         158 -----TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT-----MKTY-----------EKILNA  216 (316)
T ss_dssp             -----BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHH-----------HHHHHC
T ss_pred             -----cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCH-----HHHH-----------HHHHcC
Confidence                 2456899999999999999999999999999999999999999975321     1111           111111


Q ss_pred             cCCCCCHHHHHHHHHHHHhhcccCCCCCC-----CHHHHHH
Q 012213          419 RLSNTPLSEAMQVFFVAMLCVQEHGVERP-----TMREVVQ  454 (468)
Q Consensus       419 ~~~~~~~~~~~~~~~l~~~c~~~~P~~RP-----t~~ev~~  454 (468)
                      .. ..+......+.+++.+|+..||.+||     |++|+++
T Consensus       217 ~~-~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~  256 (316)
T d1fota_         217 EL-RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  256 (316)
T ss_dssp             CC-CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             CC-CCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHc
Confidence            11 12223345678899999999999996     8999875


No 39 
>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=100.00  E-value=3e-49  Score=369.84  Aligned_cols=253  Identities=26%  Similarity=0.319  Sum_probs=203.6

Q ss_pred             hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCc-------hhHHHHHHHHHhCCC-CCCccceeEEEec
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSH-------DNGLSAEIRTLGKIR-HRNIVRLKAFCSN  251 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~-------~~~~~~e~~~l~~l~-h~niv~l~~~~~~  251 (468)
                      .++|+..+.||+|+||+||+|++ .+|+.||||++.........       .+.+.+|+.++++++ ||||+++++++.+
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~   81 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET   81 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred             cccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeccc
Confidence            56788899999999999999997 57899999998754433221       135788999999997 9999999999999


Q ss_pred             CCeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q 012213          252 KETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGL  331 (468)
Q Consensus       252 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl  331 (468)
                      ++..++||||+++|+|.+++...  ..+++.++..++.||+.||+|||+.+   |+||||||+||+++.++.+||+|||+
T Consensus        82 ~~~~~ivmE~~~~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~  156 (277)
T d1phka_          82 NTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDFGF  156 (277)
T ss_dssp             SSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTT
T ss_pred             CcceEEEEEcCCCchHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcC---CcccccccceEEEcCCCCeEEccchh
Confidence            99999999999999999999743  35899999999999999999999888   99999999999999999999999999


Q ss_pred             cccccccCCCccccccccCccccCccccC------CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhh
Q 012213          332 AKYLQDTGASECMSAVAGSYGYIAPEYAY------TLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQT  405 (468)
Q Consensus       332 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~  405 (468)
                      ++.+...   .......||+.|+|||.+.      ...++.++||||+||++|||+||+.||.+....    ..+... .
T Consensus       157 a~~~~~~---~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~----~~~~~i-~  228 (277)
T d1phka_         157 SCQLDPG---EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM----LMLRMI-M  228 (277)
T ss_dssp             CEECCTT---CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHH-H
T ss_pred             eeEccCC---CceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHH----HHHHHH-H
Confidence            9876532   2234567999999999875      345788999999999999999999999763311    001000 0


Q ss_pred             cccccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213          406 NSSKEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ  454 (468)
Q Consensus       406 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~  454 (468)
                      .... .   .    ..........++.+++.+|++.||++|||++||++
T Consensus       229 ~~~~-~---~----~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         229 SGNY-Q---F----GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             HTCC-C---C----CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             hCCC-C---C----CCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            0000 0   0    01112234567889999999999999999999865


No 40 
>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00  E-value=4.4e-49  Score=370.07  Aligned_cols=263  Identities=25%  Similarity=0.334  Sum_probs=201.9

Q ss_pred             hhhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCC-CchhHHHHHHHHHhCCCCCCccceeEEEecCCe---
Q 012213          180 ILECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGS-SHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKET---  254 (468)
Q Consensus       180 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~---  254 (468)
                      +.++|+..+.||+|+||+||+|.+ .+|+.||||++....... .....+.+|+.+++.++||||+++++++...+.   
T Consensus         5 l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~   84 (277)
T d1o6ya_           5 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP   84 (277)
T ss_dssp             ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSE
T ss_pred             ccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCc
Confidence            356788899999999999999997 578999999997543322 233568999999999999999999999876543   


Q ss_pred             -eEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q 012213          255 -NLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAK  333 (468)
Q Consensus       255 -~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~  333 (468)
                       .++||||+++|+|.+++...  ..+++.++..++.||+.||+|||+.+   |+||||||+|||++.++..+++|||.+.
T Consensus        85 ~~~lvmE~~~g~~L~~~~~~~--~~l~~~~~~~i~~qi~~al~~lH~~~---iiHrDiKP~NIll~~~~~~~l~d~~~~~  159 (277)
T d1o6ya_          85 LPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIAR  159 (277)
T ss_dssp             EEEEEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTSCEEECCCTTCE
T ss_pred             eEEEEEECCCCCEehhhhccc--CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCccccCcccccCccccceeehhhhhh
Confidence             68999999999999988643  35899999999999999999999887   9999999999999999999999999987


Q ss_pred             cccccC-CCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccch
Q 012213          334 YLQDTG-ASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGV  412 (468)
Q Consensus       334 ~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (468)
                      ...... .........||+.|+|||++.+..++.++|||||||++|||+||++||.+...     .+............ 
T Consensus       160 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-----~~~~~~~~~~~~~~-  233 (277)
T d1o6ya_         160 AIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP-----VSVAYQHVREDPIP-  233 (277)
T ss_dssp             ECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHHHHCCCCC-
T ss_pred             hhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCH-----HHHHHHHHhcCCCC-
Confidence            654322 22234456799999999999999999999999999999999999999975321     11111111111000 


Q ss_pred             hhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCC-CHHHHHHHHHhcc
Q 012213          413 VKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERP-TMREVVQMLAQAQ  460 (468)
Q Consensus       413 ~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RP-t~~ev~~~L~~~~  460 (468)
                      .       .......+..+.+++.+|++.||++|| |++++.+.|.++.
T Consensus       234 ~-------~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~  275 (277)
T d1o6ya_         234 P-------SARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH  275 (277)
T ss_dssp             G-------GGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             C-------chhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence            0       011112345678899999999999999 8999999998775


No 41 
>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00  E-value=5e-49  Score=380.46  Aligned_cols=247  Identities=21%  Similarity=0.230  Sum_probs=204.2

Q ss_pred             hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccC-CCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEE
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGIT-KGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLV  258 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv  258 (468)
                      .++|+..+.||+|+||+||+|.+ .+|+.||||++.... ......+.+.+|+.+++.++|||||++++++.+....++|
T Consensus        40 ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v  119 (350)
T d1rdqe_          40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV  119 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccc
Confidence            46788889999999999999997 468999999985422 1223346789999999999999999999999999999999


Q ss_pred             EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213          259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT  338 (468)
Q Consensus       259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~  338 (468)
                      |||+.+|+|.+++...  ..+++..+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+|+.+...
T Consensus       120 ~e~~~~g~l~~~l~~~--~~l~e~~~~~i~~qi~~aL~yLH~~~---iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~  194 (350)
T d1rdqe_         120 MEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR  194 (350)
T ss_dssp             EECCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred             cccccccchhhhHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---EecCcCCHHHcccCCCCCEEeeeceeeeecccc
Confidence            9999999999998643  35899999999999999999999887   999999999999999999999999999876421


Q ss_pred             CCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccc
Q 012213          339 GASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQ  418 (468)
Q Consensus       339 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  418 (468)
                           .....||+.|+|||++.+..++.++|||||||++|||+||+.||.+..     ......           .+...
T Consensus       195 -----~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~-----~~~~~~-----------~i~~~  253 (350)
T d1rdqe_         195 -----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ-----PIQIYE-----------KIVSG  253 (350)
T ss_dssp             -----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHH-----------HHHHC
T ss_pred             -----cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcC-----HHHHHH-----------HHhcC
Confidence                 235679999999999999999999999999999999999999997532     111111           11111


Q ss_pred             cCCCCCHHHHHHHHHHHHhhcccCCCCC-----CCHHHHHH
Q 012213          419 RLSNTPLSEAMQVFFVAMLCVQEHGVER-----PTMREVVQ  454 (468)
Q Consensus       419 ~~~~~~~~~~~~~~~l~~~c~~~~P~~R-----Pt~~ev~~  454 (468)
                      . ...+......+.+++..|++.||++|     ||++|+++
T Consensus       254 ~-~~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         254 K-VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             C-CCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             C-CCCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence            1 11222345567889999999999999     48999875


No 42 
>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.3e-49  Score=377.73  Aligned_cols=252  Identities=24%  Similarity=0.290  Sum_probs=199.4

Q ss_pred             chhhhccCCc-ceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhC-CCCCCccceeEEEec---
Q 012213          178 DDILECVKDN-NVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGK-IRHRNIVRLKAFCSN---  251 (468)
Q Consensus       178 ~~~~~~~~~~-~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~---  251 (468)
                      ..+.++|++. +.||+|+||+||+|.+ .+++.||||++..       ...+.+|+.++.+ .+|||||++++++.+   
T Consensus         7 ~~i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-------~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~   79 (335)
T d2ozaa1           7 NAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYENLYA   79 (335)
T ss_dssp             SCGGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEET
T ss_pred             CCcccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-------cHHHHHHHHHHHHhcCCCCCCeEEEEEeeccc
Confidence            3446778765 5699999999999997 5689999999853       1567889988654 589999999999865   


Q ss_pred             -CCeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC---CCceEEe
Q 012213          252 -KETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS---DFEAHVA  327 (468)
Q Consensus       252 -~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~  327 (468)
                       ....++|||||++|+|.+++.......+++.++..++.||+.||+|||+.+   |+||||||+|||++.   ++.+||+
T Consensus        80 ~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~---iiHRDiKp~NIll~~~~~~~~~Kl~  156 (335)
T d2ozaa1          80 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLT  156 (335)
T ss_dssp             TEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCSSTTCCEEEC
T ss_pred             CCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcC---Ccccccccccccccccccccccccc
Confidence             456799999999999999998655567999999999999999999999887   999999999999986   5679999


Q ss_pred             eccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcc
Q 012213          328 DFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNS  407 (468)
Q Consensus       328 Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~  407 (468)
                      |||+|+.....   .......||+.|+|||++.+..++.++|||||||++|||+||++||.+.....  ......     
T Consensus       157 DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~--~~~~~~-----  226 (335)
T d2ozaa1         157 DFGFAKETTSH---NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA--ISPGMK-----  226 (335)
T ss_dssp             CCTTCEECCCC---CCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------------
T ss_pred             ccceeeeccCC---CccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHH--HHHHHH-----
Confidence            99999876532   22345679999999999999999999999999999999999999996532211  000000     


Q ss_pred             cccchhhhccccC-CCCC--HHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213          408 SKEGVVKILDQRL-SNTP--LSEAMQVFFVAMLCVQEHGVERPTMREVVQ  454 (468)
Q Consensus       408 ~~~~~~~~~d~~~-~~~~--~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~  454 (468)
                           ..+..... ...+  .....++.+++.+|++.||++|||+.|+++
T Consensus       227 -----~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  271 (335)
T d2ozaa1         227 -----TRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  271 (335)
T ss_dssp             ------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             -----HHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence                 00111111 0111  233467889999999999999999999987


No 43 
>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.1e-48  Score=374.16  Aligned_cols=249  Identities=20%  Similarity=0.275  Sum_probs=204.4

Q ss_pred             hhhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEE
Q 012213          179 DILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLL  257 (468)
Q Consensus       179 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l  257 (468)
                      +++++|+..+.||+|+||+||+|.+. +|+.||||.+...   ......+.+|+++|+.++|||||++++++.+++..++
T Consensus         2 ~~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~---~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~l   78 (321)
T d1tkia_           2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK---GTDQVLVKKEISILNIARHRNILHLHESFESMEELVM   78 (321)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC---THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEE
T ss_pred             CCccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCC---cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEE
Confidence            56788999999999999999999985 6889999998543   2223568899999999999999999999999999999


Q ss_pred             EEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC--CceEEeeccccccc
Q 012213          258 VYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD--FEAHVADFGLAKYL  335 (468)
Q Consensus       258 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~--~~~kl~Dfgla~~~  335 (468)
                      ||||+++|+|.+++... +..+++.++..++.||+.||+|||+.+   |+||||||+|||++.+  ..+||+|||+++..
T Consensus        79 vmE~~~gg~L~~~i~~~-~~~l~e~~~~~i~~qi~~al~yLH~~~---iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~  154 (321)
T d1tkia_          79 IFEFISGLDIFERINTS-AFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQL  154 (321)
T ss_dssp             EECCCCCCBHHHHHTSS-SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEEC
T ss_pred             EEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHcC---CCcccccccceeecCCCceEEEEcccchhhcc
Confidence            99999999999999643 345899999999999999999999887   9999999999999854  57999999999876


Q ss_pred             cccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhh
Q 012213          336 QDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKI  415 (468)
Q Consensus       336 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  415 (468)
                      ..   ........+|+.|+|||...+..++.++||||+||++|||++|+.||......     +.           ...+
T Consensus       155 ~~---~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~-----~~-----------~~~i  215 (321)
T d1tkia_         155 KP---GDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ-----QI-----------IENI  215 (321)
T ss_dssp             CT---TCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH-----HH-----------HHHH
T ss_pred             cc---CCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHH-----HH-----------HHHH
Confidence            42   22234567899999999999999999999999999999999999999763211     11           1111


Q ss_pred             ccccCCCCCH----HHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213          416 LDQRLSNTPL----SEAMQVFFVAMLCVQEHGVERPTMREVVQ  454 (468)
Q Consensus       416 ~d~~~~~~~~----~~~~~~~~l~~~c~~~~P~~RPt~~ev~~  454 (468)
                      ...... .+.    ....++.+++..|+..||++|||++|+++
T Consensus       216 ~~~~~~-~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         216 MNAEYT-FDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             HHTCCC-CCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HhCCCC-CChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            111111 111    12345788999999999999999999987


No 44 
>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}
Probab=100.00  E-value=1.2e-48  Score=379.83  Aligned_cols=251  Identities=22%  Similarity=0.246  Sum_probs=198.4

Q ss_pred             hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCC-CCCchhHH---HHHHHHHhCCCCCCccceeEEEecCCee
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITK-GSSHDNGL---SAEIRTLGKIRHRNIVRLKAFCSNKETN  255 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~---~~e~~~l~~l~h~niv~l~~~~~~~~~~  255 (468)
                      .++|+..+.||+|+||.||+|++. +|+.||||++..... .......+   ..++.+++.++|||||++++++.+.+..
T Consensus         3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~~   82 (364)
T d1omwa3           3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL   82 (364)
T ss_dssp             STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred             HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCEE
Confidence            456888899999999999999975 689999999853221 11111223   3447788888999999999999999999


Q ss_pred             EEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccc
Q 012213          256 LLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYL  335 (468)
Q Consensus       256 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~  335 (468)
                      ++||||+++|+|.+++...  ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+|+.+
T Consensus        83 ~ivmE~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~ylH~~~---iiHrDlKP~NILl~~~g~iKl~DFGla~~~  157 (364)
T d1omwa3          83 SFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDF  157 (364)
T ss_dssp             EEEECCCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSSSCEEECCCTTCEEC
T ss_pred             EEEEEecCCCcHHHHHHhc--ccccHHHHHHHHHHHHHHHHHHHHCC---ccceeeccceeEEcCCCcEEEeeeceeeec
Confidence            9999999999999999643  35889999999999999999999888   999999999999999999999999999876


Q ss_pred             cccCCCccccccccCccccCccccCC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhh
Q 012213          336 QDTGASECMSAVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVK  414 (468)
Q Consensus       336 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  414 (468)
                      ...    ......||+.|+|||++.. ..++.++|||||||++|||+||+.||.......  ......            
T Consensus       158 ~~~----~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~--~~~~~~------------  219 (364)
T d1omwa3         158 SKK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD--KHEIDR------------  219 (364)
T ss_dssp             SSS----CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSC--HHHHHH------------
T ss_pred             CCC----cccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHH--HHHHHH------------
Confidence            532    2345679999999999864 568999999999999999999999997643221  111111            


Q ss_pred             hccccCCCCCHHHHHHHHHHHHhhcccCCCCCCC-----HHHHHH
Q 012213          415 ILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPT-----MREVVQ  454 (468)
Q Consensus       415 ~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt-----~~ev~~  454 (468)
                      .........+......+.+++.+|++.||++|||     ++|+++
T Consensus       220 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~  264 (364)
T d1omwa3         220 MTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  264 (364)
T ss_dssp             HSSSCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred             hcccCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence            1111111122234456788999999999999999     688864


No 45 
>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.1e-48  Score=371.13  Aligned_cols=274  Identities=22%  Similarity=0.314  Sum_probs=204.2

Q ss_pred             hccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEe
Q 012213          182 ECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYE  260 (468)
Q Consensus       182 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  260 (468)
                      ++|+..+.||+|+||+||+|.+ .+|+.||||+++.........+.+.+|++++++++|||||++++++.++...++|||
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~~~~~~iv~e   81 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE   81 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEeccccccccceeEEEe
Confidence            5678889999999999999997 568999999996544433344779999999999999999999999999999999999


Q ss_pred             ccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccCC
Q 012213          261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGA  340 (468)
Q Consensus       261 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  340 (468)
                      |+.+ ++.+++.......+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+|+.....  
T Consensus        82 ~~~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~---IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~--  155 (298)
T d1gz8a_          82 FLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--  155 (298)
T ss_dssp             CCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTHHHHHCCC--
T ss_pred             ecCC-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCC---EEccccCchheeecccCcceeccCCcceeccCC--
Confidence            9964 5555555455567999999999999999999999888   999999999999999999999999999876422  


Q ss_pred             CccccccccCccccCccccCCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccc---cchhhhc
Q 012213          341 SECMSAVAGSYGYIAPEYAYTLK-VDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSK---EGVVKIL  416 (468)
Q Consensus       341 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~  416 (468)
                      ........||+.|+|||...... ++.++||||+||++|||++|+.||.+.+... .+..-.........   .......
T Consensus       156 ~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~  234 (298)
T d1gz8a_         156 VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVTSMP  234 (298)
T ss_dssp             SBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGST
T ss_pred             cccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHH-HHHHHHHhcCCCchhhcccccccc
Confidence            23344567999999999877655 5789999999999999999999997532110 01100000000000   0000000


Q ss_pred             ccc-----CCCCC-----HHHHHHHHHHHHhhcccCCCCCCCHHHHHH--HHHhccCC
Q 012213          417 DQR-----LSNTP-----LSEAMQVFFVAMLCVQEHGVERPTMREVVQ--MLAQAQKP  462 (468)
Q Consensus       417 d~~-----~~~~~-----~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~--~L~~~~~~  462 (468)
                      +..     ....+     ......+.+++.+|++.||++|||++|+++  .++++..+
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~p  292 (298)
T d1gz8a_         235 DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP  292 (298)
T ss_dssp             TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred             ccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCCCC
Confidence            000     00111     122356788999999999999999999998  46666544


No 46 
>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.5e-49  Score=375.73  Aligned_cols=248  Identities=24%  Similarity=0.286  Sum_probs=200.0

Q ss_pred             hccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCC-CCCchhHHHHHHHHHh-CCCCCCccceeEEEecCCeeEEE
Q 012213          182 ECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITK-GSSHDNGLSAEIRTLG-KIRHRNIVRLKAFCSNKETNLLV  258 (468)
Q Consensus       182 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~-~l~h~niv~l~~~~~~~~~~~lv  258 (468)
                      ++|+..+.||+|+||+||+|.++ +|+.||||++..... .....+.+..|+.++. .++|||||++++++.+++..++|
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yiv   81 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFV   81 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeEE
Confidence            46788899999999999999985 688999999864321 1222345667777655 68999999999999999999999


Q ss_pred             EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecccccccccc
Q 012213          259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDT  338 (468)
Q Consensus       259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~  338 (468)
                      |||+++|+|.+++....  .+++.++..++.||+.||+|||+.+   |+||||||+|||+++++.+||+|||+++.....
T Consensus        82 mEy~~~g~L~~~i~~~~--~~~e~~~~~~~~qi~~al~ylH~~~---iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~  156 (320)
T d1xjda_          82 MEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLG  156 (320)
T ss_dssp             EECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred             EeecCCCcHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCcccceeecCCCceeccccchhhhcccc
Confidence            99999999999997433  4889999999999999999999887   999999999999999999999999999866422


Q ss_pred             CCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchhhhccc
Q 012213          339 GASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVVKILDQ  418 (468)
Q Consensus       339 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  418 (468)
                        ........||+.|+|||++.+..++.++|||||||++|||+||+.||.+....    ..+...            ...
T Consensus       157 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~----~~~~~i------------~~~  218 (320)
T d1xjda_         157 --DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE----ELFHSI------------RMD  218 (320)
T ss_dssp             --TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH----HHHHHH------------HHC
T ss_pred             --cccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHH----HHHHHH------------HcC
Confidence              23345568999999999999999999999999999999999999999753211    011111            001


Q ss_pred             cCCCCCHHHHHHHHHHHHhhcccCCCCCCCHH-HHH
Q 012213          419 RLSNTPLSEAMQVFFVAMLCVQEHGVERPTMR-EVV  453 (468)
Q Consensus       419 ~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~-ev~  453 (468)
                      . ...+......+.+++.+|++.||++|||+. |++
T Consensus       219 ~-~~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  253 (320)
T d1xjda_         219 N-PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR  253 (320)
T ss_dssp             C-CCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             C-CCCCccCCHHHHHHHHHhcccCCCCCcCHHHHHH
Confidence            1 112223345678999999999999999995 675


No 47 
>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.5e-48  Score=370.65  Aligned_cols=265  Identities=21%  Similarity=0.279  Sum_probs=195.9

Q ss_pred             cceEcccCCcceEEEEcC-CCcEEEEEEecccCCCC---CchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEecc
Q 012213          187 NNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGS---SHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEYM  262 (468)
Q Consensus       187 ~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~  262 (468)
                      .++||+|+||+||+|.++ +|+.||||++.......   .....+.+|+.++++++|||||++++++.+++..++||||+
T Consensus         3 l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~~~~~~ivmE~~   82 (299)
T d1ua2a_           3 LDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM   82 (299)
T ss_dssp             EEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEECC
T ss_pred             ceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeeccCCceeehhhhh
Confidence            368999999999999984 68999999986433221   11356889999999999999999999999999999999999


Q ss_pred             CCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccCCCc
Q 012213          263 PNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGASE  342 (468)
Q Consensus       263 ~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~  342 (468)
                      +++++..+..  ....+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++......  .
T Consensus        83 ~~~~~~~~~~--~~~~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~--~  155 (299)
T d1ua2a_          83 ETDLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN--R  155 (299)
T ss_dssp             SEEHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC--C
T ss_pred             cchHHhhhhh--cccCCCHHHHHHHHHHHHHHHHHhhccc---eecccCCcceEEecCCCccccccCccccccCCCc--c
Confidence            9888777664  3345888999999999999999999888   9999999999999999999999999998765322  2


Q ss_pred             cccccccCccccCccccCC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccchh---hhcc-
Q 012213          343 CMSAVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGVV---KILD-  417 (468)
Q Consensus       343 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~d-  417 (468)
                      ......||+.|+|||++.. ..++.++|||||||++|||+||++||....... .+............+...   .... 
T Consensus       156 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~-~l~~i~~~~~~~~~~~~~~~~~~~~~  234 (299)
T d1ua2a_         156 AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-QLTRIFETLGTPTEEQWPDMCSLPDY  234 (299)
T ss_dssp             CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTTSSSTTSSTTC
T ss_pred             cccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHH-HHHHHHHhcCCCChhhccchhccchh
Confidence            2345679999999998865 457999999999999999999999997532110 011000000000000000   0000 


Q ss_pred             ---ccCCCCCH-----HHHHHHHHHHHhhcccCCCCCCCHHHHHH--HHHhc
Q 012213          418 ---QRLSNTPL-----SEAMQVFFVAMLCVQEHGVERPTMREVVQ--MLAQA  459 (468)
Q Consensus       418 ---~~~~~~~~-----~~~~~~~~l~~~c~~~~P~~RPt~~ev~~--~L~~~  459 (468)
                         ......+.     .....+.+++.+|++.||++|||++|+++  .|++.
T Consensus       235 ~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~  286 (299)
T d1ua2a_         235 VTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNR  286 (299)
T ss_dssp             CCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSS
T ss_pred             hhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCC
Confidence               00011111     12356889999999999999999999987  45544


No 48 
>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}
Probab=100.00  E-value=4.8e-48  Score=364.87  Aligned_cols=265  Identities=21%  Similarity=0.274  Sum_probs=199.8

Q ss_pred             hccCCcceEcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEec
Q 012213          182 ECVKDNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYEY  261 (468)
Q Consensus       182 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~  261 (468)
                      ++|+..+.||+|+||+||+|.+++|+.||||++..........+.+.+|+.++++++||||+++++++...+..++++||
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~e~   81 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH   81 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred             CCceeccEEecCCCcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEEEe
Confidence            46778899999999999999999999999999966544344447899999999999999999999999999999999999


Q ss_pred             cCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccCCC
Q 012213          262 MPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGAS  341 (468)
Q Consensus       262 ~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~  341 (468)
                      +.++.+..+..  ....+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+|++|||.+.......  
T Consensus        82 ~~~~~~~~~~~--~~~~l~~~~~~~i~~qi~~~L~~LH~~~---IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~--  154 (286)
T d1ob3a_          82 LDQDLKKLLDV--CEGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPV--  154 (286)
T ss_dssp             CSEEHHHHHHT--STTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred             ehhhhHHHHHh--hcCCcchhhhHHHHHHHHHHHHHhccCc---EEecCCCCceeeEcCCCCEEecccccceecccCc--
Confidence            98777766654  3356999999999999999999999887   9999999999999999999999999998765322  


Q ss_pred             ccccccccCccccCccccCCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccch---hhhc-
Q 012213          342 ECMSAVAGSYGYIAPEYAYTL-KVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGV---VKIL-  416 (468)
Q Consensus       342 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-  416 (468)
                      .......+++.|+|||.+.+. .++.++|||||||++|||++|+.||.+..... .+...............   .... 
T Consensus       155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~  233 (286)
T d1ob3a_         155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRILGTPNSKNWPNVTELPK  233 (286)
T ss_dssp             -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred             cccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHH-HHHHHHHhhCCCChhhccchhhhhh
Confidence            223445689999999988654 56899999999999999999999997633111 01110000000000000   0000 


Q ss_pred             -cccC--------CCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213          417 -DQRL--------SNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ  454 (468)
Q Consensus       417 -d~~~--------~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~  454 (468)
                       +...        ..........+.+++.+|++.||++|||++|+++
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (286)
T ss_dssp             CCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence             0000        0011123456788999999999999999999974


No 49 
>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=3.6e-48  Score=362.67  Aligned_cols=242  Identities=21%  Similarity=0.355  Sum_probs=194.7

Q ss_pred             hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCC----CchhHHHHHHHHHhCCC--CCCccceeEEEecCC
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGS----SHDNGLSAEIRTLGKIR--HRNIVRLKAFCSNKE  253 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~----~~~~~~~~e~~~l~~l~--h~niv~l~~~~~~~~  253 (468)
                      ..+|+..+.||+|+||+||+|.+ .+|+.||||++.......    ....++.+|+.++++++  |||||++++++.+++
T Consensus         3 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~~~   82 (273)
T d1xwsa_           3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD   82 (273)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred             CCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEeeCC
Confidence            35688889999999999999997 468999999986543221    11234678999999886  899999999999999


Q ss_pred             eeEEEEeccCC-CChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCC-CceEEeeccc
Q 012213          254 TNLLVYEYMPN-GSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSD-FEAHVADFGL  331 (468)
Q Consensus       254 ~~~lv~e~~~~-gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfgl  331 (468)
                      ..++||||+.+ +++.+++...  ..+++.++..++.||+.||+|||+.+   |+||||||+|||++.+ +.+||+|||+
T Consensus        83 ~~~lv~e~~~~~~~l~~~~~~~--~~l~e~~~~~~~~qi~~al~~lH~~~---iiHrDiKp~NIll~~~~~~vkl~DFG~  157 (273)
T d1xwsa_          83 SFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGS  157 (273)
T ss_dssp             EEEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred             eEEEEEEeccCcchHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCC---CccccCcccceEEecCCCeEEECcccc
Confidence            99999999976 6777777543  35899999999999999999999887   9999999999999854 7999999999


Q ss_pred             cccccccCCCccccccccCccccCccccCCCCC-CcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhccccc
Q 012213          332 AKYLQDTGASECMSAVAGSYGYIAPEYAYTLKV-DEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKE  410 (468)
Q Consensus       332 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  410 (468)
                      |+.....    ......||+.|+|||++.+..+ +.++|||||||++|||+||+.||....          .. ...   
T Consensus       158 a~~~~~~----~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~----------~i-~~~---  219 (273)
T d1xwsa_         158 GALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE----------EI-IRG---  219 (273)
T ss_dssp             CEECCSS----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH----------HH-HHC---
T ss_pred             ceecccc----cccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch----------HH-hhc---
Confidence            9865422    2345679999999999887765 567899999999999999999996411          00 000   


Q ss_pred             chhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213          411 GVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ  454 (468)
Q Consensus       411 ~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~  454 (468)
                              .. ..+.....++.+++.+|++.||++|||++|+++
T Consensus       220 --------~~-~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         220 --------QV-FFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             --------CC-CCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             --------cc-CCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence                    00 011122356788999999999999999999987


No 50 
>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=9.3e-47  Score=359.52  Aligned_cols=271  Identities=20%  Similarity=0.240  Sum_probs=199.0

Q ss_pred             hhccCCcceEcccCCcceEEEEcC-C-CcEEEEEEecccCCCCCchhHHHHHHHHHhCC---CCCCccceeEEEec----
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVTP-N-GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKI---RHRNIVRLKAFCSN----  251 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~----  251 (468)
                      .++|+..+.||+|+||+||+|.+. + ++.||||++............+.+|+.+++.+   +||||+++++++..    
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            467888999999999999999973 4 56799999875444333334567788776655   79999999999853    


Q ss_pred             -CCeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeecc
Q 012213          252 -KETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFG  330 (468)
Q Consensus       252 -~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg  330 (468)
                       ....+++|||++++++..... .....+++..+..++.|++.||+|||+.+   |+||||||+|||+++++.+||+|||
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~qi~~aL~yLH~~~---ivHrDiKp~NILi~~~~~~kl~dfg  161 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDK-VPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFG  161 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHH-SCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECSCC
T ss_pred             cCceEEEEEEeccCCchhhhhh-ccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEecCCCccEEEEcCCCCeeecchh
Confidence             345789999998877654443 34456899999999999999999999887   9999999999999999999999999


Q ss_pred             ccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhccccc
Q 012213          331 LAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKE  410 (468)
Q Consensus       331 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~  410 (468)
                      +++....   ........||+.|+|||++.+..++.++||||+||++|||+||++||.+.... ..+.............
T Consensus       162 ~~~~~~~---~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~~~~~  237 (305)
T d1blxa_         162 LARIYSF---QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILDVIGLPGEE  237 (305)
T ss_dssp             SCCCCCG---GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCGG
T ss_pred             hhhhhcc---cccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHH-HHHHHHHHhhCCCchh
Confidence            9986542   23345678999999999999999999999999999999999999999763211 0011100000000000


Q ss_pred             ch-------hhhcccc----CCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH--HHHhc
Q 012213          411 GV-------VKILDQR----LSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ--MLAQA  459 (468)
Q Consensus       411 ~~-------~~~~d~~----~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~--~L~~~  459 (468)
                      ..       .......    ...........+.+++.+|++.||++|||++|+++  .++++
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i  299 (305)
T d1blxa_         238 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL  299 (305)
T ss_dssp             GSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTC
T ss_pred             cccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCc
Confidence            00       0000000    00111223355778999999999999999999986  35554


No 51 
>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.5e-45  Score=349.85  Aligned_cols=267  Identities=20%  Similarity=0.259  Sum_probs=195.7

Q ss_pred             hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEec--------
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSN--------  251 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--------  251 (468)
                      .++|+..+.||+|+||+||+|.+ .+|+.||||++...........++.+|+.+|++++|||++++++++..        
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~   88 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC   88 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccccccc
Confidence            57888999999999999999997 578999999986554444445778999999999999999999998855        


Q ss_pred             CCeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q 012213          252 KETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGL  331 (468)
Q Consensus       252 ~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl  331 (468)
                      ....++||||++++.+..+..  ....++...+..++.||+.||.|||+.+   |+||||||+|||++.++.+||+|||+
T Consensus        89 ~~~~~iv~e~~~~~~~~~~~~--~~~~~~~~~~~~i~~qil~~l~~lH~~~---ivHrDlKp~NILl~~~~~~kl~dfg~  163 (318)
T d3blha1          89 KGSIYLVFDFCEHDLAGLLSN--VLVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGL  163 (318)
T ss_dssp             --CEEEEEECCCEEHHHHHTC--TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTT
T ss_pred             CceEEEEEeccCCCccchhhh--cccccccHHHHHHHHHHHHHHHHhccCC---EEecCcCchheeecCCCcEEeeecce
Confidence            345789999998877765553  3345888999999999999999999887   99999999999999999999999999


Q ss_pred             cccccccCCC--ccccccccCccccCccccCCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcc-
Q 012213          332 AKYLQDTGAS--ECMSAVAGSYGYIAPEYAYTL-KVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNS-  407 (468)
Q Consensus       332 a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~-  407 (468)
                      ++.+......  .......||+.|+|||.+.+. .++.++||||+||++|||++|+.||.+....  ....-....... 
T Consensus       164 ~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~--~~~~~i~~~~~~~  241 (318)
T d3blha1         164 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQ--HQLALISQLCGSI  241 (318)
T ss_dssp             CEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCC
T ss_pred             eeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHH--HHHHHHHHhcCCC
Confidence            9876532221  222345799999999998754 6899999999999999999999999753211  000000000000 


Q ss_pred             cccchhhh--------ccccC-CCCCHH-------HHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213          408 SKEGVVKI--------LDQRL-SNTPLS-------EAMQVFFVAMLCVQEHGVERPTMREVVQ  454 (468)
Q Consensus       408 ~~~~~~~~--------~d~~~-~~~~~~-------~~~~~~~l~~~c~~~~P~~RPt~~ev~~  454 (468)
                      ..+.....        +.... ......       ....+.+++.+|++.||++|||++|+++
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~  304 (318)
T d3blha1         242 TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN  304 (318)
T ss_dssp             CTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             ChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHc
Confidence            00000000        00000 011111       1234668999999999999999999986


No 52 
>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=100.00  E-value=1e-44  Score=342.62  Aligned_cols=261  Identities=18%  Similarity=0.239  Sum_probs=203.6

Q ss_pred             hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCC-CCccceeEEEecCCeeEEE
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRH-RNIVRLKAFCSNKETNLLV  258 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv  258 (468)
                      -++|+..+.||+|+||+||+|++. +|+.||||.+......    ..+.+|++.+..++| +|++.+++++......++|
T Consensus         4 g~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~v   79 (293)
T d1csna_           4 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA----PQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV   79 (293)
T ss_dssp             TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS----CCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred             CCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccCc----HHHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEE
Confidence            356888999999999999999974 6889999987543322    347889999999965 8999999999999999999


Q ss_pred             EeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC-----CCceEEeeccccc
Q 012213          259 YEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS-----DFEAHVADFGLAK  333 (468)
Q Consensus       259 ~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~-----~~~~kl~Dfgla~  333 (468)
                      |||+ +++|.+++.. ....+++.++..++.|++.||+|||+.+   |+||||||+|||++.     ++.+||+|||+|+
T Consensus        80 me~~-~~~l~~~~~~-~~~~~~~~~~~~i~~q~~~~l~~lH~~g---iiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~  154 (293)
T d1csna_          80 IDLL-GPSLEDLLDL-CGRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVK  154 (293)
T ss_dssp             EECC-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCE
T ss_pred             EEec-CCCHHHHHHh-hccchhhHHHHHHHHHHHHHHHHHHHCC---ceeccCCccceeecCcccccCCceEEcccceeE
Confidence            9999 7899998864 3346899999999999999999999777   999999999999975     5789999999999


Q ss_pred             cccccCCC-----ccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhccc
Q 012213          334 YLQDTGAS-----ECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSS  408 (468)
Q Consensus       334 ~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~  408 (468)
                      .+......     .......||+.|+|||.+.+..++.++|||||||++|||+||+.||........ ...+........
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~-~~~~~~i~~~~~  233 (293)
T d1csna_         155 FYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATN-KQKYERIGEKKQ  233 (293)
T ss_dssp             ESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCH-HHHHHHHHHHHH
T ss_pred             EcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhH-HHHHHHHHhccC
Confidence            87533221     123456799999999999999999999999999999999999999976432211 111111000000


Q ss_pred             ccchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhc
Q 012213          409 KEGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQA  459 (468)
Q Consensus       409 ~~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~  459 (468)
                      .....++.    .    ..+.++.+++..|++.+|++||+++.+.+.|+++
T Consensus       234 ~~~~~~l~----~----~~p~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~  276 (293)
T d1csna_         234 STPLRELC----A----GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV  276 (293)
T ss_dssp             HSCHHHHT----T----TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred             CCChHHhc----C----CCCHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence            00011110    1    1234577889999999999999999999888775


No 53 
>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00  E-value=7.4e-45  Score=345.17  Aligned_cols=258  Identities=20%  Similarity=0.249  Sum_probs=197.0

Q ss_pred             hccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccce-eEEEecCCeeEEEE
Q 012213          182 ECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRL-KAFCSNKETNLLVY  259 (468)
Q Consensus       182 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l-~~~~~~~~~~~lv~  259 (468)
                      ++|+..+.||+|+||+||+|.+ .+|+.||||.+......    .++..|+++++.++|+|++.. .++..+.+..++||
T Consensus         7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~~~~E~~i~~~l~~~~~i~~~~~~~~~~~~~~ivm   82 (299)
T d1ckia_           7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH----PQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM   82 (299)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTS----CCHHHHHHHHHHSTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccC----HHHHHHHHHHHHccCCCcccEEEEEEecCCEEEEEE
Confidence            4688889999999999999987 56899999987643322    458899999999987776555 55557778889999


Q ss_pred             eccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcC---CCceEEeecccccccc
Q 012213          260 EYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNS---DFEAHVADFGLAKYLQ  336 (468)
Q Consensus       260 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfgla~~~~  336 (468)
                      ||+ ++++.+.+.. ....+++..+..++.|++.||+|||+.+   |+||||||+|||++.   +..+||+|||+|+.+.
T Consensus        83 e~~-~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~  157 (299)
T d1ckia_          83 ELL-GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR  157 (299)
T ss_dssp             ECC-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCSSCEECB
T ss_pred             EEc-CCchhhhhhh-ccCCCcHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHhhccccccCCCceeeeeccCcceecc
Confidence            999 5677666543 3345899999999999999999999888   999999999999864   5579999999999875


Q ss_pred             ccCCC-----ccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCc--CHHHHHHHhhcccc
Q 012213          337 DTGAS-----ECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGL--DIVQWTKMQTNSSK  409 (468)
Q Consensus       337 ~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~--~~~~~~~~~~~~~~  409 (468)
                      .....     .......||+.|+|||.+.+..++.++|||||||++|||+||+.||........  ....+........ 
T Consensus       158 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~-  236 (299)
T d1ckia_         158 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP-  236 (299)
T ss_dssp             CTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSC-
T ss_pred             ccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCC-
Confidence            43321     223456799999999999999999999999999999999999999976432221  1111111110000 


Q ss_pred             cchhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHhc
Q 012213          410 EGVVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQMLAQA  459 (468)
Q Consensus       410 ~~~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~~L~~~  459 (468)
                        ....        ....+.++.+++..|++.+|++||+++++.+.|+.+
T Consensus       237 --~~~~--------~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~  276 (299)
T d1ckia_         237 --IEVL--------CKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL  276 (299)
T ss_dssp             --HHHH--------TTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHH
T ss_pred             --hhHh--------ccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHH
Confidence              0000        112235678899999999999999999999988865


No 54 
>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.5e-45  Score=345.08  Aligned_cols=266  Identities=23%  Similarity=0.287  Sum_probs=203.9

Q ss_pred             hccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCCeeEEEEe
Q 012213          182 ECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKETNLLVYE  260 (468)
Q Consensus       182 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e  260 (468)
                      ++|+..+.||+|+||+||+|++ .+++.||||+++..........++.+|+.+++.++||||+++++++.+....++|+|
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~~   81 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEee
Confidence            4678889999999999999997 578899999997655545556788999999999999999999999999999999999


Q ss_pred             ccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccccccCC
Q 012213          261 YMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYLQDTGA  340 (468)
Q Consensus       261 ~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~  340 (468)
                      ++.++++..++..  ...+++..+..++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||.++...... 
T Consensus        82 ~~~~~~l~~~~~~--~~~~~~~~~~~~~~q~~~aL~~lH~~~---IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~-  155 (292)
T d1unla_          82 FCDQDLKKYFDSC--NGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPV-  155 (292)
T ss_dssp             CCSEEHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSCC-
T ss_pred             ecccccccccccc--ccccchhHHHHHHHHHHHHHHHhhcCC---EeeecccCcccccccCCceeeeecchhhcccCCC-
Confidence            9999998888753  345889999999999999999999887   9999999999999999999999999998765322 


Q ss_pred             CccccccccCccccCccccCCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccc---cchhhhc
Q 012213          341 SECMSAVAGSYGYIAPEYAYTLK-VDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSK---EGVVKIL  416 (468)
Q Consensus       341 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~  416 (468)
                       .......++..|+|||.+.... ++.++|||||||++|||++|+.||......................   ....+..
T Consensus       156 -~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (292)
T d1unla_         156 -RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP  234 (292)
T ss_dssp             -SCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred             -ccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcc
Confidence             2233456788999999887655 6899999999999999999999975422111101100000000000   0000000


Q ss_pred             c----------ccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213          417 D----------QRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ  454 (468)
Q Consensus       417 d----------~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~  454 (468)
                      +          .............+.+++.+|++.||++|||++|+++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             cccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            0          0011122233456778999999999999999999986


No 55 
>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.4e-45  Score=354.12  Aligned_cols=268  Identities=27%  Similarity=0.325  Sum_probs=195.0

Q ss_pred             ccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecC------Cee
Q 012213          183 CVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNK------ETN  255 (468)
Q Consensus       183 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~  255 (468)
                      .|+..++||+|+||+||+|++. +|+.||||++.....      ...+|+.++++++||||+++++++...      ...
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~------~~~~Ei~il~~l~h~niv~~~~~~~~~~~~~~~~~~   94 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL   94 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS------SCCHHHHHHHHCCCTTBCCEEEEEEEC--CCSCCEE
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccch------HHHHHHHHHHhcCCCCCCcEEEEEEecCccCCceEE
Confidence            4677789999999999999985 689999999864322      234799999999999999999998543      246


Q ss_pred             EEEEeccCCCChhhhccc-CCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC-ceEEeeccccc
Q 012213          256 LLVYEYMPNGSLGEVLHG-KRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF-EAHVADFGLAK  333 (468)
Q Consensus       256 ~lv~e~~~~gsL~~~l~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfgla~  333 (468)
                      ++||||++++.+..+.+. .....+++.++..++.||+.||+|||+.+   |+||||||+|||++.++ .+||+|||+++
T Consensus        95 ~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~---IiHrDiKp~NILl~~~~~~~kl~DFG~a~  171 (350)
T d1q5ka_          95 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK  171 (350)
T ss_dssp             EEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTTCCEEECCCTTCE
T ss_pred             EEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcC---CcccCCCcceEEEecCCCceeEecccchh
Confidence            899999986644443321 23446999999999999999999999777   99999999999999875 89999999998


Q ss_pred             cccccCCCccccccccCccccCccccCC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccch
Q 012213          334 YLQDTGASECMSAVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEGV  412 (468)
Q Consensus       334 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  412 (468)
                      .+...   .......||+.|+|||.+.+ ..++.++||||+||++|||++|++||...... ..+............+.+
T Consensus       172 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~-~~l~~i~~~~g~~~~~~~  247 (350)
T d1q5ka_         172 QLVRG---EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTREQI  247 (350)
T ss_dssp             ECCTT---SCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH-HHHHHHHHHHCCCCHHHH
T ss_pred             hccCC---cccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHH-HHHHHHHHHhCCChHHhh
Confidence            76432   22345679999999998764 57899999999999999999999999753311 111111110000000000


Q ss_pred             hhh----ccccC---------CCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH--HHHhccCCC
Q 012213          413 VKI----LDQRL---------SNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ--MLAQAQKPN  463 (468)
Q Consensus       413 ~~~----~d~~~---------~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~--~L~~~~~~~  463 (468)
                      ...    .+...         ..........+.+++.+|++.||++|||++|+++  .+++++.++
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~~~  313 (350)
T d1q5ka_         248 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFFDELRDPN  313 (350)
T ss_dssp             HHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGGGCTT
T ss_pred             hhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccccCCC
Confidence            000    00000         0011123456788999999999999999999996  466665443


No 56 
>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=6.9e-46  Score=359.60  Aligned_cols=269  Identities=23%  Similarity=0.348  Sum_probs=196.7

Q ss_pred             hhhhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCC----
Q 012213          179 DILECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKE----  253 (468)
Q Consensus       179 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----  253 (468)
                      ++.++|+..+.||+|+||+||+|.+. +|+.||||++..........+.+.+|+.+|+.++|||||+++++|...+    
T Consensus        15 ~~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~   94 (346)
T d1cm8a_          15 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDD   94 (346)
T ss_dssp             CCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTT
T ss_pred             ecCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCccccc
Confidence            34678889999999999999999974 6899999998754333333467889999999999999999999997655    


Q ss_pred             --eeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccc
Q 012213          254 --TNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGL  331 (468)
Q Consensus       254 --~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgl  331 (468)
                        ..++||||+ +++|.++.+.   ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+|++|||+
T Consensus        95 ~~~~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~~---IiHrDiKp~NIL~~~~~~~kl~Dfg~  167 (346)
T d1cm8a_          95 FTDFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGL  167 (346)
T ss_dssp             CCCCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTT
T ss_pred             cceEEEEEecc-cccHHHHHHh---ccccHHHHHHHHHHHHHHHHHHHhCC---CcccccCcchhhcccccccccccccc
Confidence              469999999 6678777753   24999999999999999999999888   99999999999999999999999999


Q ss_pred             cccccccCCCccccccccCccccCccccCC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcc---
Q 012213          332 AKYLQDTGASECMSAVAGSYGYIAPEYAYT-LKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNS---  407 (468)
Q Consensus       332 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~---  407 (468)
                      |+.....     .....||+.|+|||.+.+ ..++.++||||+||++|||++|++||.+.+.. ..+..........   
T Consensus       168 a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~  241 (346)
T d1cm8a_         168 ARQADSE-----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL-DQLKEIMKVTGTPPAE  241 (346)
T ss_dssp             CEECCSS-----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHH
T ss_pred             eeccCCc-----cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChH-HHHHHHHhccCCCcHH
Confidence            9875422     345678999999998865 45789999999999999999999999764211 0011111000000   


Q ss_pred             -----cccc---hh----hhccccCCCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH--HHHhcc
Q 012213          408 -----SKEG---VV----KILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ--MLAQAQ  460 (468)
Q Consensus       408 -----~~~~---~~----~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~--~L~~~~  460 (468)
                           ....   ..    ......+..........+.+++.+|+..||++|||++|+++  .|+++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~  308 (346)
T d1cm8a_         242 FVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  308 (346)
T ss_dssp             HHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             HHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCC
Confidence                 0000   00    00000001111223345678999999999999999999997  355543


No 57 
>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=7.3e-45  Score=351.84  Aligned_cols=264  Identities=19%  Similarity=0.259  Sum_probs=194.5

Q ss_pred             hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecCC----ee
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNKE----TN  255 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----~~  255 (468)
                      .++|+..+.||+|+||+||+|.+ .+|+.||||++.... .....+.+.+|+.+|++++|||++++++++....    ..
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~   85 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD   85 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTT-CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred             CCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhc-ChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccce
Confidence            45688899999999999999987 579999999986432 2223357889999999999999999999996543    23


Q ss_pred             EEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccccc
Q 012213          256 LLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAKYL  335 (468)
Q Consensus       256 ~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~~  335 (468)
                      +++++|+.+|+|.+++...   .+++..+..++.|++.||+|||+.+   |+||||||+|||++.++.+||+|||+++..
T Consensus        86 ~~l~~~~~~g~L~~~l~~~---~l~~~~i~~i~~qil~al~yLH~~~---iiHRDIKp~NILl~~~~~~kl~DfG~a~~~  159 (345)
T d1pmea_          86 VYLVTHLMGADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA  159 (345)
T ss_dssp             EEEEEECCCEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred             EEEEEeecCCchhhhhhcC---CCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCcceEEECCCCCEEEcccCceeec
Confidence            4555667799999999643   4899999999999999999999888   999999999999999999999999999876


Q ss_pred             cccCC-CccccccccCccccCccccC-CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccc----
Q 012213          336 QDTGA-SECMSAVAGSYGYIAPEYAY-TLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSK----  409 (468)
Q Consensus       336 ~~~~~-~~~~~~~~gt~~y~aPE~~~-~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~----  409 (468)
                      ..... ........||+.|+|||.+. +..++.++||||+||++|||++|+.||.......  .. +.........    
T Consensus       160 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~--~~-~~~~~~~~~~~~~~  236 (345)
T d1pmea_         160 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD--QL-NHILGILGSPSQED  236 (345)
T ss_dssp             CGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HH-HHHHHHHCSCCHHH
T ss_pred             cCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHH--HH-HHHhhhccCCChhh
Confidence            53322 22234567999999999874 4567899999999999999999999997633110  00 1000000000    


Q ss_pred             ------cchhhhc--cccCCCCCH-----HHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213          410 ------EGVVKIL--DQRLSNTPL-----SEAMQVFFVAMLCVQEHGVERPTMREVVQ  454 (468)
Q Consensus       410 ------~~~~~~~--d~~~~~~~~-----~~~~~~~~l~~~c~~~~P~~RPt~~ev~~  454 (468)
                            .......  .......+.     ....++.+++.+|++.||++|||++|+++
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~  294 (345)
T d1pmea_         237 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  294 (345)
T ss_dssp             HHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             hhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence                  0000000  000011111     11245788999999999999999999997


No 58 
>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=5.5e-45  Score=348.41  Aligned_cols=255  Identities=24%  Similarity=0.265  Sum_probs=201.4

Q ss_pred             hhccCCcceEcccCCcceEEEEc----CCCcEEEEEEecccCC--CCCchhHHHHHHHHHhCCCC-CCccceeEEEecCC
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVT----PNGEQVAVKKLLGITK--GSSHDNGLSAEIRTLGKIRH-RNIVRLKAFCSNKE  253 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~  253 (468)
                      .++|+..+.||+|+||+||+|..    .+|+.||||.+.....  .....+.+.+|++++++++| |||+++++++.+..
T Consensus        23 l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~~~  102 (322)
T d1vzoa_          23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET  102 (322)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred             hhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeeccCC
Confidence            46788999999999999999985    2478999999864321  12223568899999999976 89999999999999


Q ss_pred             eeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q 012213          254 TNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAK  333 (468)
Q Consensus       254 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~  333 (468)
                      ..+++|||+++|+|.+++....  .++......++.||+.||+|||+.+   |+||||||+|||++.++.+||+|||+++
T Consensus       103 ~~~~v~e~~~~~~L~~~i~~~~--~~~e~~~~~~~~Qi~~al~~lH~~~---ivHrDiKp~Nill~~~~~vkL~DFG~a~  177 (322)
T d1vzoa_         103 KLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSK  177 (322)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred             ceeeeeecccccHHHHHHHhcc--cccHHHHHHHHHHHHHHHHHhhcCC---EEeccCCccceeecCCCCEEEeeccchh
Confidence            9999999999999999996443  4678889999999999999999887   9999999999999999999999999998


Q ss_pred             cccccCCCccccccccCccccCccccCCC--CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhcccccc
Q 012213          334 YLQDTGASECMSAVAGSYGYIAPEYAYTL--KVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSSKEG  411 (468)
Q Consensus       334 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  411 (468)
                      .+... .........|++.|+|||.+.+.  .++.++|||||||++|||+||+.||........ .........      
T Consensus       178 ~~~~~-~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~-~~~i~~~~~------  249 (322)
T d1vzoa_         178 EFVAD-ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-QAEISRRIL------  249 (322)
T ss_dssp             ECCGG-GGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-HHHHHHHHH------
T ss_pred             hhccc-ccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcc------
Confidence            76532 22233456799999999988654  478899999999999999999999976443221 111111110      


Q ss_pred             hhhhccccCCCCCHHHHHHHHHHHHhhcccCCCCCC-----CHHHHHH
Q 012213          412 VVKILDQRLSNTPLSEAMQVFFVAMLCVQEHGVERP-----TMREVVQ  454 (468)
Q Consensus       412 ~~~~~d~~~~~~~~~~~~~~~~l~~~c~~~~P~~RP-----t~~ev~~  454 (468)
                           ... ...+.....++.+++.+|++.||++||     |++|+++
T Consensus       250 -----~~~-~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         250 -----KSE-PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             -----HCC-CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             -----cCC-CCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence                 110 112234567788899999999999999     4788875


No 59 
>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=4.3e-44  Score=347.75  Aligned_cols=262  Identities=23%  Similarity=0.256  Sum_probs=190.4

Q ss_pred             hhccCCcceEcccCCcceEEEEcC-CCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEec------CC
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVTP-NGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSN------KE  253 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~  253 (468)
                      .++|+..+.||+|+||+||+|.+. +|+.||||++...........++.+|+.++++++||||+++++++..      ..
T Consensus        16 ~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~   95 (355)
T d2b1pa1          16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ   95 (355)
T ss_dssp             ETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             cCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCc
Confidence            477999999999999999999985 69999999997654444444578899999999999999999999964      36


Q ss_pred             eeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q 012213          254 TNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAK  333 (468)
Q Consensus       254 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~  333 (468)
                      ..++||||+.++.+. .+.    ..+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+|++|||+++
T Consensus        96 ~~~iv~Ey~~~~l~~-~~~----~~~~~~~i~~~~~qil~gl~~LH~~g---iiHrDlKP~Nil~~~~~~~kl~df~~~~  167 (355)
T d2b1pa1          96 DVYLVMELMDANLCQ-VIQ----MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR  167 (355)
T ss_dssp             EEEEEEECCSEEHHH-HHT----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC--
T ss_pred             eeEEEEeccchHHHH-hhh----cCCCHHHHHHHHHHHHHHHHHhhhcc---cccccCCccccccccccceeeechhhhh
Confidence            779999999765544 443    23889999999999999999999888   9999999999999999999999999988


Q ss_pred             cccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHH------------HHH
Q 012213          334 YLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIV------------QWT  401 (468)
Q Consensus       334 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~------------~~~  401 (468)
                      ....   ........+|+.|+|||++.+..+++++||||+||++|||++|+.||.+.+... ...            .|.
T Consensus       168 ~~~~---~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~-~~~~i~~~~~~~~~~~~~  243 (355)
T d2b1pa1         168 TAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQLGTPCPEFMK  243 (355)
T ss_dssp             ----------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHT
T ss_pred             cccc---ccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHH-HHHHHHHhccCCCHHHHH
Confidence            6542   223345678999999999999999999999999999999999999996532100 000            000


Q ss_pred             ------HHhhcc----cccchhhhccccC----CCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213          402 ------KMQTNS----SKEGVVKILDQRL----SNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ  454 (468)
Q Consensus       402 ------~~~~~~----~~~~~~~~~d~~~----~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~  454 (468)
                            ......    ........+....    ..........+.+++.+|+..||++|||++|+++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~  310 (355)
T d2b1pa1         244 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  310 (355)
T ss_dssp             TSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence                  000000    0000111111111    1112234567889999999999999999999985


No 60 
>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}
Probab=100.00  E-value=1e-43  Score=341.86  Aligned_cols=258  Identities=22%  Similarity=0.282  Sum_probs=196.1

Q ss_pred             hhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCC-CCCccceeEEEecC--CeeE
Q 012213          181 LECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIR-HRNIVRLKAFCSNK--ETNL  256 (468)
Q Consensus       181 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~--~~~~  256 (468)
                      .++|+..+.||+|+||+||+|++ .+|+.||||+++..     ..+++.+|+.+|++++ ||||+++++++...  ...+
T Consensus        34 ~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~-----~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~  108 (328)
T d3bqca1          34 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPA  108 (328)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS-----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEE
T ss_pred             CcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH-----HHHHHHHHHHHHHhccCCCCCcEEEEEEEecCCCcee
Confidence            45788999999999999999998 56899999998532     2367899999999995 99999999998743  4588


Q ss_pred             EEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCC-ceEEeeccccccc
Q 012213          257 LVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDF-EAHVADFGLAKYL  335 (468)
Q Consensus       257 lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfgla~~~  335 (468)
                      +||||+++++|.++..     .+++..+..++.||+.||+|||+.+   |+||||||+|||++.++ .+||+|||+|+..
T Consensus       109 ~v~e~~~~~~L~~~~~-----~l~e~~i~~i~~qil~aL~~LH~~g---IvHrDiKp~NILi~~~~~~vkl~DFG~a~~~  180 (328)
T d3bqca1         109 LVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFY  180 (328)
T ss_dssp             EEEECCCSCBGGGTTT-----SCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCGGGCEEC
T ss_pred             EEEeecCCCcHHHHhc-----CCCHHHHHHHHHHHHHHHHHHhhcc---cccccccccceEEcCCCCeeeecccccceec
Confidence            9999999999987652     4899999999999999999999888   99999999999998765 6999999999876


Q ss_pred             cccCCCccccccccCccccCccccCCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCH------------HHHHH
Q 012213          336 QDTGASECMSAVAGSYGYIAPEYAYTL-KVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDI------------VQWTK  402 (468)
Q Consensus       336 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~------------~~~~~  402 (468)
                      ...   .......+|+.|+|||.+.+. .++.++||||+||++|||++|+.||..........            ..|..
T Consensus       181 ~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~  257 (328)
T d3bqca1         181 HPG---QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYID  257 (328)
T ss_dssp             CTT---CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHH
T ss_pred             cCC---CcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhh
Confidence            532   223456789999999997765 47999999999999999999999997643211100            01111


Q ss_pred             Hhhcccccchhhhcccc--------C-CCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHH
Q 012213          403 MQTNSSKEGVVKILDQR--------L-SNTPLSEAMQVFFVAMLCVQEHGVERPTMREVVQ  454 (468)
Q Consensus       403 ~~~~~~~~~~~~~~d~~--------~-~~~~~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~  454 (468)
                      .................        . .........++.+++.+|+..||++|||++|+++
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         258 KYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  318 (328)
T ss_dssp             HTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hcccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            11011000111111000        0 0111223456788999999999999999999986


No 61 
>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=9.2e-44  Score=345.08  Aligned_cols=270  Identities=22%  Similarity=0.323  Sum_probs=198.7

Q ss_pred             hhhccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEEecC-----C
Q 012213          180 ILECVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFCSNK-----E  253 (468)
Q Consensus       180 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~  253 (468)
                      +.++|+..+.||+|+||+||+|.+ .+|+.||||++..........+++.+|+.+++.++|||+|++++++...     .
T Consensus        16 ~~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~~~~~~   95 (348)
T d2gfsa1          16 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF   95 (348)
T ss_dssp             EETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSTTTC
T ss_pred             CCCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeccccccC
Confidence            356788999999999999999997 5799999999875444333445788999999999999999999998643     3


Q ss_pred             eeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q 012213          254 TNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADFGLAK  333 (468)
Q Consensus       254 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~  333 (468)
                      ..+++++|+.+|+|.+++...   .+++..+..++.||+.||+|||+.+   |+||||||+|||++.++.+|++|||++.
T Consensus        96 ~~~~i~~~~~gg~L~~~~~~~---~l~e~~~~~i~~qil~aL~~LH~~g---iiHrDiKp~NILi~~~~~~kl~dfg~a~  169 (348)
T d2gfsa1          96 NDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR  169 (348)
T ss_dssp             CCCEEEEECCSEEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCC----
T ss_pred             ceEEEEEeecCCchhhhcccc---cccHHHHHHHHHHHHHHHHHHHhCC---CcccccCCccccccccccccccccchhc
Confidence            446777888899999999643   4999999999999999999999887   9999999999999999999999999997


Q ss_pred             cccccCCCccccccccCccccCccccCCC-CCCcchhhHHHHHHHHHHHhCCCCCCCCCCCCcCHHHHHHHhhccc----
Q 012213          334 YLQDTGASECMSAVAGSYGYIAPEYAYTL-KVDEKSDVYSFGVVLLELITGRRPVGDFGEEGLDIVQWTKMQTNSS----  408 (468)
Q Consensus       334 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----  408 (468)
                      ...     .......||+.|+|||...+. .++.++||||+||++|||++|++||.+.+..  .............    
T Consensus       170 ~~~-----~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~--~~~~~i~~~~~~~~~~~  242 (348)
T d2gfsa1         170 HTD-----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI--DQLKLILRLVGTPGAEL  242 (348)
T ss_dssp             CCT-----GGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCHHH
T ss_pred             ccC-----cccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHH--HHHHHHHHhcCCCChHH
Confidence            543     223456789999999986665 4689999999999999999999999753211  0000000000000    


Q ss_pred             -----ccchhhhccc--cCCCCC-----HHHHHHHHHHHHhhcccCCCCCCCHHHHHH--HHHhccCC
Q 012213          409 -----KEGVVKILDQ--RLSNTP-----LSEAMQVFFVAMLCVQEHGVERPTMREVVQ--MLAQAQKP  462 (468)
Q Consensus       409 -----~~~~~~~~d~--~~~~~~-----~~~~~~~~~l~~~c~~~~P~~RPt~~ev~~--~L~~~~~~  462 (468)
                           ..........  ......     ......+.+++.+|++.||++|||++|+++  .+.+...+
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~Hp~f~~~~~~  310 (348)
T d2gfsa1         243 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP  310 (348)
T ss_dssp             HTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCT
T ss_pred             hhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhcCHhhCCCCCC
Confidence                 0000000000  001111     112345778999999999999999999997  56655433


No 62 
>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=100.00  E-value=7.7e-38  Score=304.90  Aligned_cols=269  Identities=19%  Similarity=0.182  Sum_probs=191.4

Q ss_pred             ccCCcceEcccCCcceEEEEc-CCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCC-----------CCCccceeEEEe
Q 012213          183 CVKDNNVIGRGGAGVVYRGVT-PNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIR-----------HRNIVRLKAFCS  250 (468)
Q Consensus       183 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-----------h~niv~l~~~~~  250 (468)
                      +|+..+.||+|+||+||+|++ .+|+.||||++....   ...+.+.+|+.+++.++           |+||+++++++.
T Consensus        14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~---~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~   90 (362)
T d1q8ya_          14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK---VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN   90 (362)
T ss_dssp             TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH---HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred             cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccc---cchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEee
Confidence            488899999999999999997 578999999986321   22356778888887775           578999999875


Q ss_pred             c--CCeeEEEEeccCCCC-hhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhh-cCCCCeeecCCCCCcEEEcCCCc---
Q 012213          251 N--KETNLLVYEYMPNGS-LGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHH-DCSPLIIHRDVKSNNILLNSDFE---  323 (468)
Q Consensus       251 ~--~~~~~lv~e~~~~gs-L~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-~~~~~ivH~dlk~~Nill~~~~~---  323 (468)
                      .  ....+++++++..+. ............+++..+..++.||+.||+|||+ .+   |+||||||+|||++.++.   
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~---IvHrDlKp~NIll~~~~~~~~  167 (362)
T d1q8ya_          91 HKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPEN  167 (362)
T ss_dssp             EEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETTTT
T ss_pred             eccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcC---cccccCChhHeeeeccCcccc
Confidence            4  345566666665443 3333344455568899999999999999999997 66   999999999999987653   


Q ss_pred             ---eEEeeccccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCCCC-cC---
Q 012213          324 ---AHVADFGLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRRPVGDFGEEG-LD---  396 (468)
Q Consensus       324 ---~kl~Dfgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l~elltg~~p~~~~~~~~-~~---  396 (468)
                         ++++|||.+......     .....||+.|+|||+.....++.++||||+||+++||++|+.||...+... ..   
T Consensus       168 ~~~~kl~dfg~s~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~  242 (362)
T d1q8ya_         168 LIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDD  242 (362)
T ss_dssp             EEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHH
T ss_pred             cceeeEeecccccccccc-----cccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhH
Confidence               999999999765422     245679999999999999999999999999999999999999997632211 10   


Q ss_pred             -HHHHHHHhhccccc------chhhhccc--------------------cCCCCCHHHHHHHHHHHHhhcccCCCCCCCH
Q 012213          397 -IVQWTKMQTNSSKE------GVVKILDQ--------------------RLSNTPLSEAMQVFFVAMLCVQEHGVERPTM  449 (468)
Q Consensus       397 -~~~~~~~~~~~~~~------~~~~~~d~--------------------~~~~~~~~~~~~~~~l~~~c~~~~P~~RPt~  449 (468)
                       +............+      ......+.                    ............+.+++.+|+..||++|||+
T Consensus       243 ~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta  322 (362)
T d1q8ya_         243 HIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADA  322 (362)
T ss_dssp             HHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCH
T ss_pred             HHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCH
Confidence             11111100000000      00000000                    0122345677889999999999999999999


Q ss_pred             HHHHH--HHHhccCC
Q 012213          450 REVVQ--MLAQAQKP  462 (468)
Q Consensus       450 ~ev~~--~L~~~~~~  462 (468)
                      +|+++  .+++....
T Consensus       323 ~e~L~Hp~f~~~~~~  337 (362)
T d1q8ya_         323 GGLVNHPWLKDTLGM  337 (362)
T ss_dssp             HHHHTCGGGTTCTTC
T ss_pred             HHHhcCcccCCCCCc
Confidence            99987  35544333


No 63 
>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=99.90  E-value=6.2e-25  Score=192.90  Aligned_cols=170  Identities=16%  Similarity=0.182  Sum_probs=118.7

Q ss_pred             CcceEcccCCcceEEEEcCCCcEEEEEEecccCCC----C--------C----chhHHHHHHHHHhCCCCCCccceeEEE
Q 012213          186 DNNVIGRGGAGVVYRGVTPNGEQVAVKKLLGITKG----S--------S----HDNGLSAEIRTLGKIRHRNIVRLKAFC  249 (468)
Q Consensus       186 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----~--------~----~~~~~~~e~~~l~~l~h~niv~l~~~~  249 (468)
                      .++.||+|+||+||+|.+.+|+.||||.++.....    .        .    .......|+..+.++.|.+++..+++.
T Consensus         4 vg~~IG~G~~g~Vy~a~~~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~~~~   83 (191)
T d1zara2           4 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVYAWE   83 (191)
T ss_dssp             EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEEEEE
T ss_pred             hCCEeeeCcceEEEEEECCCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEEEec
Confidence            46899999999999999989999999987532110    0        0    012345678889999999999888763


Q ss_pred             ecCCeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCCCCCcEEEcCCCceEEeec
Q 012213          250 SNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDVKSNNILLNSDFEAHVADF  329 (468)
Q Consensus       250 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df  329 (468)
                          ..+++|||+++..+.++         +......++.|++.|++|||+.+   |+||||||+|||++++ .++|+||
T Consensus        84 ----~~~lvme~~~~~~~~~l---------~~~~~~~i~~ql~~~l~~lH~~g---iiHrDiKP~NILv~~~-~~~liDF  146 (191)
T d1zara2          84 ----GNAVLMELIDAKELYRV---------RVENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLVSEE-GIWIIDF  146 (191)
T ss_dssp             ----TTEEEEECCCCEEGGGC---------CCSCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEETT-EEEECCC
T ss_pred             ----CCEEEEEeeccccccch---------hhHHHHHHHHHHHHHHHHHhhCC---EEEccCChhheeeeCC-CEEEEEC
Confidence                23799999987655432         33445678999999999999888   9999999999999965 5899999


Q ss_pred             cccccccccCCCccccccccCccccCccccCCCCCCcchhhHHHHHHH
Q 012213          330 GLAKYLQDTGASECMSAVAGSYGYIAPEYAYTLKVDEKSDVYSFGVVL  377 (468)
Q Consensus       330 gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~s~G~~l  377 (468)
                      |+|.............   ..... -.+. ....|+.++|+||..--+
T Consensus       147 G~a~~~~~~~~~~~l~---rd~~~-~~~~-f~r~y~~~~d~~s~~~~~  189 (191)
T d1zara2         147 PQSVEVGEEGWREILE---RDVRN-IITY-FSRTYRTEKDINSAIDRI  189 (191)
T ss_dssp             TTCEETTSTTHHHHHH---HHHHH-HHHH-HHHHHCCCCCHHHHHHHH
T ss_pred             CCcccCCCCCcHHHHH---HHHHH-HHHH-HcCCCCCcccHHHHHHHH
Confidence            9997654221110000   00000 0011 235678899999975443


No 64 
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.65  E-value=5.1e-17  Score=153.23  Aligned_cols=109  Identities=31%  Similarity=0.474  Sum_probs=101.7

Q ss_pred             CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213            1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG   80 (468)
Q Consensus         1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~   80 (468)
                      +++|.+.|.+|..++.+++|+.|++++|.+++.+| +++.+++|+.|||++|+|+|.+|++|+++++|+.|||++|+|+|
T Consensus       204 l~~~~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~-~~~~~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l~g  282 (313)
T d1ogqa_         204 LSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCG  282 (313)
T ss_dssp             CCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGG-GCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEE
T ss_pred             ccccccccccccccccccccccccccccccccccc-ccccccccccccCccCeecccCChHHhCCCCCCEEECcCCcccc
Confidence            45788888899999999999999999999997665 79999999999999999999999999999999999999999999


Q ss_pred             CCCCcccccccCcccccCCCCCCCCCCCCC
Q 012213           81 EIPEFGQYSFFNSTSFTGNPHLCGSYLNPC  110 (468)
Q Consensus        81 ~~p~~~~~~~~~~~~~~~n~~lcg~~~~~c  110 (468)
                      .+|+++++.++..+++++|+.+||.++..|
T Consensus       283 ~iP~~~~L~~L~~l~l~~N~~l~g~plp~c  312 (313)
T d1ogqa_         283 EIPQGGNLQRFDVSAYANNKCLCGSPLPAC  312 (313)
T ss_dssp             ECCCSTTGGGSCGGGTCSSSEEESTTSSCC
T ss_pred             cCCCcccCCCCCHHHhCCCccccCCCCCCC
Confidence            999999999999999999999999887777


No 65 
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.54  E-value=3.9e-15  Score=129.59  Aligned_cols=105  Identities=21%  Similarity=0.314  Sum_probs=86.2

Q ss_pred             CCCCcccccC-CcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccC
Q 012213            1 MSRNNFSGII-PVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFS   79 (468)
Q Consensus         1 l~~N~l~g~~-p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~   79 (468)
                      |++|+|++.+ +..|+++++|+.|+|++|++++..+..+..+++|++|+|++|+|++..|..|.++++|+.|+|++|+|+
T Consensus        36 Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~~l~~~~F~~l~~L~~L~L~~N~l~  115 (192)
T d1w8aa_          36 LNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQIS  115 (192)
T ss_dssp             CCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCC
T ss_pred             eCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeeccccccccCHHHHhCCCcccccccCCcccc
Confidence            6788888655 456788888999999999988777888888899999999999988655667888899999999999998


Q ss_pred             CCCCC-cccccccCcccccCCCCCCCC
Q 012213           80 GEIPE-FGQYSFFNSTSFTGNPHLCGS  105 (468)
Q Consensus        80 ~~~p~-~~~~~~~~~~~~~~n~~lcg~  105 (468)
                      +.+|. |..+.++..+.+++|++.|.+
T Consensus       116 ~i~~~~f~~l~~L~~l~L~~N~~~~~~  142 (192)
T d1w8aa_         116 CVMPGSFEHLNSLTSLNLASNPFNCNC  142 (192)
T ss_dssp             EECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred             ccCHHHhcCCccccccccccccccccc
Confidence            77774 777888888888888887664


No 66 
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.53  E-value=8.8e-15  Score=117.43  Aligned_cols=96  Identities=21%  Similarity=0.343  Sum_probs=85.7

Q ss_pred             CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213            1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG   80 (468)
Q Consensus         1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~   80 (468)
                      |++|+|+ .+| .++++++|++|||++|+|+ .+|..++.+++|++|++++|.++ .+| .+..+++|+.|++++|+++.
T Consensus         5 Ls~n~l~-~l~-~l~~l~~L~~L~ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~-~~~~l~~L~~L~l~~N~i~~   79 (124)
T d1dcea3           5 LAHKDLT-VLC-HLEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCNNRLQQ   79 (124)
T ss_dssp             CTTSCCS-SCC-CGGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCG-GGTTCSSCCEEECCSSCCCS
T ss_pred             cCCCCCC-CCc-ccccCCCCCEEECCCCccC-cchhhhhhhhccccccccccccc-ccC-ccccccccCeEECCCCccCC
Confidence            6899999 777 5999999999999999999 79999999999999999999999 576 59999999999999999986


Q ss_pred             CCC--CcccccccCcccccCCCC
Q 012213           81 EIP--EFGQYSFFNSTSFTGNPH  101 (468)
Q Consensus        81 ~~p--~~~~~~~~~~~~~~~n~~  101 (468)
                      ..+  .+..++++..+++++|+.
T Consensus        80 ~~~~~~l~~~~~L~~L~l~~N~i  102 (124)
T d1dcea3          80 SAAIQPLVSCPRLVLLNLQGNSL  102 (124)
T ss_dssp             SSTTGGGGGCTTCCEEECTTSGG
T ss_pred             CCCchhhcCCCCCCEEECCCCcC
Confidence            543  467778899999999974


No 67 
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.41  E-value=4.8e-14  Score=132.43  Aligned_cols=101  Identities=29%  Similarity=0.544  Sum_probs=92.5

Q ss_pred             CCCCcccc--cCCcccccCCCCCEEEccC-CcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcc
Q 012213            1 MSRNNFSG--IIPVEIGHCLLLTYLDLSQ-NHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNN   77 (468)
Q Consensus         1 l~~N~l~g--~~p~~~~~l~~L~~L~l~~-n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~   77 (468)
                      |++|.++|  .+|.++++|++|++|+|++ |+++|.||.+|++|++|++|||++|+++|..|..+..+..|+.+++++|+
T Consensus        57 L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L~~l~l~~N~  136 (313)
T d1ogqa_          57 LSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNA  136 (313)
T ss_dssp             EECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSE
T ss_pred             CCCCCCCCCCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhhccccccccc
Confidence            46788988  5899999999999999997 89999999999999999999999999999889889999999999999999


Q ss_pred             cCCCCC-CcccccccCcccccCCCC
Q 012213           78 FSGEIP-EFGQYSFFNSTSFTGNPH  101 (468)
Q Consensus        78 l~~~~p-~~~~~~~~~~~~~~~n~~  101 (468)
                      +.+.+| .+..+..+..+.+++|..
T Consensus       137 ~~~~~p~~l~~l~~L~~l~l~~n~l  161 (313)
T d1ogqa_         137 LSGTLPPSISSLPNLVGITFDGNRI  161 (313)
T ss_dssp             EESCCCGGGGGCTTCCEEECCSSCC
T ss_pred             ccccCchhhccCcccceeecccccc
Confidence            999988 488888888899888853


No 68 
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.39  E-value=3.6e-13  Score=112.51  Aligned_cols=103  Identities=17%  Similarity=0.127  Sum_probs=87.2

Q ss_pred             CCCcccccCCcccccCCCCCEEEccCCc-ccccCC-ccccccccccEeeccCCcccccCCcccccccccccccccCcccC
Q 012213            2 SRNNFSGIIPVEIGHCLLLTYLDLSQNH-LSGPIP-VQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFS   79 (468)
Q Consensus         2 ~~N~l~g~~p~~~~~l~~L~~L~l~~n~-l~g~~p-~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~   79 (468)
                      ++|+++ .+|..+..+++|+.|+|++|+ |+ .|| ..|.++++|+.|+|++|+|+..-|..|..+++|+.|+|++|+|+
T Consensus        16 ~~~~~~-~~p~~l~~l~~l~~L~l~~n~~l~-~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~   93 (156)
T d2ifga3          16 TRDGAL-DSLHHLPGAENLTELYIENQQHLQ-HLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE   93 (156)
T ss_dssp             CSSCCC-TTTTTSCSCSCCSEEECCSCSSCC-EECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCS
T ss_pred             cCCCCc-cCcccccCccccCeeecCCCcccc-ccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCCc
Confidence            567777 788899999999999998764 88 565 57999999999999999999655677999999999999999999


Q ss_pred             CCCCCcccccccCcccccCCCCCCCCC
Q 012213           80 GEIPEFGQYSFFNSTSFTGNPHLCGSY  106 (468)
Q Consensus        80 ~~~p~~~~~~~~~~~~~~~n~~lcg~~  106 (468)
                      ..++.......+..+++++|++.|.+.
T Consensus        94 ~l~~~~~~~~~l~~L~L~~Np~~C~C~  120 (156)
T d2ifga3          94 SLSWKTVQGLSLQELVLSGNPLHCSCA  120 (156)
T ss_dssp             CCCSTTTCSCCCCEEECCSSCCCCCGG
T ss_pred             ccChhhhccccccccccCCCcccCCch
Confidence            666654444478899999999998763


No 69 
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.36  E-value=3e-13  Score=125.05  Aligned_cols=105  Identities=19%  Similarity=0.220  Sum_probs=94.5

Q ss_pred             CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213            1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG   80 (468)
Q Consensus         1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~   80 (468)
                      +++|+|++..+..|..+++|++|+|++|+|++..|..|.++++|+.|++++|++++..|..|..+++|+.|++++|++++
T Consensus       136 l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~~~~f~~l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~  215 (284)
T d1ozna_         136 LQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSA  215 (284)
T ss_dssp             CCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred             hccccccccChhHhccccchhhcccccCcccccchhhhccccccchhhhhhccccccChhHhhhhhhccccccccccccc
Confidence            57899996556788899999999999999997677889999999999999999998889999999999999999999998


Q ss_pred             CCCC-cccccccCcccccCCCCCCCC
Q 012213           81 EIPE-FGQYSFFNSTSFTGNPHLCGS  105 (468)
Q Consensus        81 ~~p~-~~~~~~~~~~~~~~n~~lcg~  105 (468)
                      .+|. ++.+.++..+++++|++.|.|
T Consensus       216 ~~~~~~~~~~~L~~L~l~~N~l~C~C  241 (284)
T d1ozna_         216 LPTEALAPLRALQYLRLNDNPWVCDC  241 (284)
T ss_dssp             CCHHHHTTCTTCCEEECCSSCEECSG
T ss_pred             ccccccccccccCEEEecCCCCCCCc
Confidence            7774 778889999999999999875


No 70 
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.32  E-value=1.1e-12  Score=113.78  Aligned_cols=99  Identities=18%  Similarity=0.165  Sum_probs=87.9

Q ss_pred             CCCCcccccCCcccccCCCCCEEEccCCcccccC-CccccccccccEeeccCCcccccCCcccccccccccccccCcccC
Q 012213            1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPI-PVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFS   79 (468)
Q Consensus         1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~-p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~   79 (468)
                      .++|+|+ .||..+.  +++++|+|++|+|++.+ +..|.++++|+.|+|++|.+++..+..|..+++|+.|+|++|+|+
T Consensus        15 Cs~~~L~-~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~Ls~N~l~   91 (192)
T d1w8aa_          15 CTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIK   91 (192)
T ss_dssp             CTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCC
T ss_pred             EeCCCcC-ccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeeccccccccccccccccccccceeeecccccc
Confidence            4789999 8998774  68999999999998756 556899999999999999999888889999999999999999999


Q ss_pred             CCCCC-cccccccCcccccCCCCC
Q 012213           80 GEIPE-FGQYSFFNSTSFTGNPHL  102 (468)
Q Consensus        80 ~~~p~-~~~~~~~~~~~~~~n~~l  102 (468)
                      +.+|. |..+..+..+++++|...
T Consensus        92 ~l~~~~F~~l~~L~~L~L~~N~l~  115 (192)
T d1w8aa_          92 EISNKMFLGLHQLKTLNLYDNQIS  115 (192)
T ss_dssp             EECSSSSTTCTTCCEEECCSSCCC
T ss_pred             ccCHHHHhCCCcccccccCCcccc
Confidence            87775 888999999999999643


No 71 
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.30  E-value=2.4e-12  Score=117.64  Aligned_cols=95  Identities=20%  Similarity=0.162  Sum_probs=70.9

Q ss_pred             cccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCCCCCCccccccc
Q 012213           12 VEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSGEIPEFGQYSFF   91 (468)
Q Consensus        12 ~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~   91 (468)
                      ..+..+.+|+.|++++|.++...|..+..+++|+.|++++|+|++..|..|..+++|+.|+|++|+|+..++.+..+.++
T Consensus       118 ~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~L~~lp~~~~~~~~L  197 (266)
T d1p9ag_         118 GALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLL  197 (266)
T ss_dssp             STTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCC
T ss_pred             cccccccccccccccccccceeccccccccccchhcccccccccccCccccccccccceeecccCCCcccChhHCCCCCC
Confidence            33344444555555555555333445677889999999999999766667889999999999999999444457778889


Q ss_pred             CcccccCCCCCCCCC
Q 012213           92 NSTSFTGNPHLCGSY  106 (468)
Q Consensus        92 ~~~~~~~n~~lcg~~  106 (468)
                      +.+.++||||.|.|.
T Consensus       198 ~~L~L~~Np~~CdC~  212 (266)
T d1p9ag_         198 PFAFLHGNPWLCNCE  212 (266)
T ss_dssp             SEEECCSCCBCCSGG
T ss_pred             CEEEecCCCCCCCcc
Confidence            999999999999864


No 72 
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.29  E-value=1.1e-12  Score=110.11  Aligned_cols=96  Identities=14%  Similarity=0.126  Sum_probs=57.1

Q ss_pred             CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcc-cccccccccccccCcccC
Q 012213            1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKE-MGNMKSLTSADFSHNNFS   79 (468)
Q Consensus         1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~l~~L~~l~ls~N~l~   79 (468)
                      |++|+|+ .||..+..+++|++||||+|+|+ .++ .+..+++|++|+|++|+++ .+|+. +..+++|+.|++++|+++
T Consensus        25 L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~-~l~~~~~~~l~~L~~L~L~~N~i~  100 (162)
T d1a9na_          25 LRGYKIP-VIENLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRIC-RIGEGLDQALPDLTELILTNNSLV  100 (162)
T ss_dssp             CTTSCCC-SCCCGGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCC-EECSCHHHHCTTCCEEECCSCCCC
T ss_pred             CCCCCCC-ccCccccccccCCEEECCCCCCC-ccC-CcccCcchhhhhccccccc-CCCccccccccccccceecccccc
Confidence            4566666 55655556666666666666666 453 4666666666666666666 34443 345666666666666665


Q ss_pred             CCC--CCcccccccCcccccCCC
Q 012213           80 GEI--PEFGQYSFFNSTSFTGNP  100 (468)
Q Consensus        80 ~~~--p~~~~~~~~~~~~~~~n~  100 (468)
                      ...  ..+..++++..+++++|+
T Consensus       101 ~~~~l~~l~~l~~L~~L~l~~N~  123 (162)
T d1a9na_         101 ELGDLDPLASLKSLTYLCILRNP  123 (162)
T ss_dssp             CGGGGGGGGGCTTCCEEECCSSG
T ss_pred             ccccccccccccccchhhcCCCc
Confidence            321  124445556666666664


No 73 
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.23  E-value=6.9e-12  Score=100.14  Aligned_cols=77  Identities=19%  Similarity=0.262  Sum_probs=69.7

Q ss_pred             CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCC--cccccccccccccccCccc
Q 012213            1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLP--KEMGNMKSLTSADFSHNNF   78 (468)
Q Consensus         1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p--~~~~~l~~L~~l~ls~N~l   78 (468)
                      |++|+|+ .+|..++.+++|+.|++++|+|+ .+| .++++++|+.|++++|.++ .+|  ..+..+++|+.|++++|++
T Consensus        27 ls~N~l~-~lp~~~~~l~~L~~L~l~~N~i~-~l~-~~~~l~~L~~L~l~~N~i~-~~~~~~~l~~~~~L~~L~l~~N~i  102 (124)
T d1dcea3          27 LSHNRLR-ALPPALAALRCLEVLQASDNALE-NVD-GVANLPRLQELLLCNNRLQ-QSAAIQPLVSCPRLVLLNLQGNSL  102 (124)
T ss_dssp             CCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCG-GGTTCSSCCEEECCSSCCC-SSSTTGGGGGCTTCCEEECTTSGG
T ss_pred             CCCCccC-cchhhhhhhhccccccccccccc-ccC-ccccccccCeEECCCCccC-CCCCchhhcCCCCCCEEECCCCcC
Confidence            6899998 78989999999999999999999 676 5999999999999999998 465  4689999999999999999


Q ss_pred             CCC
Q 012213           79 SGE   81 (468)
Q Consensus        79 ~~~   81 (468)
                      +..
T Consensus       103 ~~~  105 (124)
T d1dcea3         103 CQE  105 (124)
T ss_dssp             GGS
T ss_pred             CcC
Confidence            854


No 74 
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.12  E-value=5.3e-11  Score=110.72  Aligned_cols=103  Identities=19%  Similarity=0.197  Sum_probs=76.2

Q ss_pred             CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213            1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG   80 (468)
Q Consensus         1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~   80 (468)
                      |++|.+++.+|..+.+++.+++|++++|++++..|..+.++++|++|+|++|.|+ .+|++|..+++|+.|+|++|+|+.
T Consensus       178 l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~-~lp~~l~~l~~L~~L~Ls~N~i~~  256 (305)
T d1xkua_         178 LDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISA  256 (305)
T ss_dssp             CTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCC
T ss_pred             CCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeeccccccc-ccccccccccCCCEEECCCCccCc
Confidence            4677777777778888888888888888888666777888888888888888887 678888888888888888888874


Q ss_pred             CCCC-c------ccccccCcccccCCCCCCC
Q 012213           81 EIPE-F------GQYSFFNSTSFTGNPHLCG  104 (468)
Q Consensus        81 ~~p~-~------~~~~~~~~~~~~~n~~lcg  104 (468)
                      .... |      .....+..+++++|++.+.
T Consensus       257 i~~~~f~~~~~~~~~~~L~~L~L~~N~~~~~  287 (305)
T d1xkua_         257 IGSNDFCPPGYNTKKASYSGVSLFSNPVQYW  287 (305)
T ss_dssp             CCTTSSSCSSCCTTSCCCSEEECCSSSSCGG
T ss_pred             cChhhccCcchhcccCCCCEEECCCCcCccC
Confidence            3221 1      2334566777888876544


No 75 
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.10  E-value=2e-11  Score=102.30  Aligned_cols=86  Identities=13%  Similarity=0.066  Sum_probs=76.4

Q ss_pred             ccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCCCCCC-ccccccc
Q 012213           13 EIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSGEIPE-FGQYSFF   91 (468)
Q Consensus        13 ~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~-~~~~~~~   91 (468)
                      .+.++.+|+.|||++|+|+ .||..+..+++|+.||||+|.|+ .++ .|..+++|+.|++++|+++...+. +..++.+
T Consensus        13 ~~~n~~~lr~L~L~~n~I~-~i~~~~~~l~~L~~L~Ls~N~i~-~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l~~L   89 (162)
T d1a9na_          13 QYTNAVRDRELDLRGYKIP-VIENLGATLDQFDAIDFSDNEIR-KLD-GFPLLRRLKTLLVNNNRICRIGEGLDQALPDL   89 (162)
T ss_dssp             EEECTTSCEEEECTTSCCC-SCCCGGGGTTCCSEEECCSSCCC-EEC-CCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred             hccCcCcCcEEECCCCCCC-ccCccccccccCCEEECCCCCCC-ccC-CcccCcchhhhhcccccccCCCcccccccccc
Confidence            5778889999999999999 78887889999999999999999 675 689999999999999999976665 4568899


Q ss_pred             CcccccCCCC
Q 012213           92 NSTSFTGNPH  101 (468)
Q Consensus        92 ~~~~~~~n~~  101 (468)
                      ..+++++|.-
T Consensus        90 ~~L~L~~N~i   99 (162)
T d1a9na_          90 TELILTNNSL   99 (162)
T ss_dssp             CEEECCSCCC
T ss_pred             ccceeccccc
Confidence            9999999864


No 76 
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.00  E-value=2.5e-10  Score=94.80  Aligned_cols=78  Identities=21%  Similarity=0.138  Sum_probs=66.3

Q ss_pred             CCCC-cccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccC
Q 012213            1 MSRN-NFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFS   79 (468)
Q Consensus         1 l~~N-~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~   79 (468)
                      |++| .|+..-+..|.++++|+.|+|++|+|+..-|..|..+++|++|+|++|+|+ .+|..+....+|+.|+|++|.|.
T Consensus        38 l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N~l~-~l~~~~~~~~~l~~L~L~~Np~~  116 (156)
T d2ifga3          38 IENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQGLSLQELVLSGNPLH  116 (156)
T ss_dssp             CCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCS-CCCSTTTCSCCCCEEECCSSCCC
T ss_pred             cCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCCCCc-ccChhhhccccccccccCCCccc
Confidence            3445 588444567999999999999999999555778999999999999999999 78887666668999999999885


No 77 
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.95  E-value=7.2e-12  Score=108.86  Aligned_cols=87  Identities=14%  Similarity=0.171  Sum_probs=64.9

Q ss_pred             CCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCCCCCCccccc
Q 012213           10 IPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSGEIPEFGQYS   89 (468)
Q Consensus        10 ~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~   89 (468)
                      +|.+++.|++|++|+|++|+|+ .++ .+.+|++|+.|+|++|.++ .+|..+..+++|+.|++++|+++. ++.+..+.
T Consensus        40 l~~sl~~L~~L~~L~Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~~-l~~~~~l~  115 (198)
T d1m9la_          40 MDATLSTLKACKHLALSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LSGIEKLV  115 (198)
T ss_dssp             CHHHHHHTTTCCEEECSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECCC-HHHHHHHH
T ss_pred             hhhHHhcccccceeECcccCCC-Ccc-cccCCccccChhhcccccc-cccccccccccccccccccccccc-cccccccc
Confidence            3456778888888888888888 675 5888888888888888887 677666666678888888888774 45566667


Q ss_pred             ccCcccccCCC
Q 012213           90 FFNSTSFTGNP  100 (468)
Q Consensus        90 ~~~~~~~~~n~  100 (468)
                      ++..+++++|.
T Consensus       116 ~L~~L~L~~N~  126 (198)
T d1m9la_         116 NLRVLYMSNNK  126 (198)
T ss_dssp             HSSEEEESEEE
T ss_pred             cccccccccch
Confidence            77777777764


No 78 
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.95  E-value=5.5e-10  Score=102.58  Aligned_cols=98  Identities=18%  Similarity=0.148  Sum_probs=59.2

Q ss_pred             CCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCCCC
Q 012213            3 RNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSGEI   82 (468)
Q Consensus         3 ~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~   82 (468)
                      .|.++...|..+.++++|++|+|++|.+.+..+..+..+.+|+.+++++|+|++..+..|..+++|+.|++++|+|++.+
T Consensus        90 ~~~~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~l~~l~  169 (284)
T d1ozna_          90 NAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVP  169 (284)
T ss_dssp             CTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEEC
T ss_pred             ccccccccchhhcccccCCEEecCCcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCcccccc
Confidence            45555444566666667777777666666444555666666666666666666433345566666666666666666554


Q ss_pred             CC-cccccccCcccccCCC
Q 012213           83 PE-FGQYSFFNSTSFTGNP  100 (468)
Q Consensus        83 p~-~~~~~~~~~~~~~~n~  100 (468)
                      |. +..+.++..+.+++|.
T Consensus       170 ~~~f~~l~~L~~l~l~~N~  188 (284)
T d1ozna_         170 ERAFRGLHSLDRLLLHQNR  188 (284)
T ss_dssp             TTTTTTCTTCCEEECCSSC
T ss_pred             hhhhccccccchhhhhhcc
Confidence            43 4555556666666554


No 79 
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.94  E-value=8.7e-10  Score=100.21  Aligned_cols=96  Identities=22%  Similarity=0.298  Sum_probs=57.0

Q ss_pred             CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213            1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG   80 (468)
Q Consensus         1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~   80 (468)
                      |++|+|+ .+| .++.+++|++|+|++|+++ .+|..+.++++|+.|+|++|.+.+..+..+..+.+|..|++++|.+++
T Consensus        62 L~~N~l~-~l~-~~~~l~~L~~L~Ls~N~l~-~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~  138 (266)
T d1p9ag_          62 LDRAELT-KLQ-VDGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKT  138 (266)
T ss_dssp             CTTSCCC-EEE-CCSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCC
T ss_pred             ccccccc-ccc-ccccccccccccccccccc-ccccccccccccccccccccccceeeccccccccccccccccccccce
Confidence            5677777 555 3567777777777777777 456667777777777777766664344444555555555555555554


Q ss_pred             CCCC-cccccccCcccccCC
Q 012213           81 EIPE-FGQYSFFNSTSFTGN   99 (468)
Q Consensus        81 ~~p~-~~~~~~~~~~~~~~n   99 (468)
                      .++. +..+..+..+++++|
T Consensus       139 l~~~~~~~l~~l~~l~l~~N  158 (266)
T d1p9ag_         139 LPPGLLTPTPKLEKLSLANN  158 (266)
T ss_dssp             CCTTTTTTCTTCCEEECTTS
T ss_pred             eccccccccccchhcccccc
Confidence            4332 333444444444444


No 80 
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=98.89  E-value=1.5e-09  Score=100.69  Aligned_cols=98  Identities=17%  Similarity=0.230  Sum_probs=86.2

Q ss_pred             CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213            1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG   80 (468)
Q Consensus         1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~   80 (468)
                      +++|+++ .+|..+  +++|+.|++++|..++..|..+.+++.++.|++++|.+++..|..+.++++|+.|+|++|+|+.
T Consensus       157 l~~n~l~-~l~~~~--~~~L~~L~l~~n~~~~~~~~~~~~~~~l~~L~~s~n~l~~~~~~~~~~l~~L~~L~L~~N~L~~  233 (305)
T d1xkua_         157 IADTNIT-TIPQGL--PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVK  233 (305)
T ss_dssp             CCSSCCC-SCCSSC--CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSS
T ss_pred             cccCCcc-ccCccc--CCccCEEECCCCcCCCCChhHhhccccccccccccccccccccccccccccceeeecccccccc
Confidence            4677887 677654  6899999999999998999999999999999999999998778889999999999999999996


Q ss_pred             CCCCcccccccCcccccCCCC
Q 012213           81 EIPEFGQYSFFNSTSFTGNPH  101 (468)
Q Consensus        81 ~~p~~~~~~~~~~~~~~~n~~  101 (468)
                      .++.+..+++++.+++++|+-
T Consensus       234 lp~~l~~l~~L~~L~Ls~N~i  254 (305)
T d1xkua_         234 VPGGLADHKYIQVVYLHNNNI  254 (305)
T ss_dssp             CCTTTTTCSSCCEEECCSSCC
T ss_pred             cccccccccCCCEEECCCCcc
Confidence            555688899999999999863


No 81 
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=98.89  E-value=7.4e-10  Score=105.99  Aligned_cols=91  Identities=21%  Similarity=0.335  Sum_probs=68.0

Q ss_pred             CCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCCC
Q 012213            2 SRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSGE   81 (468)
Q Consensus         2 ~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~   81 (468)
                      ++|++++ + ..+..+++++.|+|++|++++ ++ .+..+++|+.|+|++|+|+ .+| .+.++++|+.|++++|+|++.
T Consensus       293 ~~n~l~~-~-~~~~~~~~l~~L~ls~n~l~~-l~-~l~~l~~L~~L~L~~n~l~-~l~-~l~~l~~L~~L~l~~N~l~~l  366 (384)
T d2omza2         293 NENQLED-I-SPISNLKNLTYLTLYFNNISD-IS-PVSSLTKLQRLFFANNKVS-DVS-SLANLTNINWLSAGHNQISDL  366 (384)
T ss_dssp             CSSCCSC-C-GGGGGCTTCSEEECCSSCCSC-CG-GGGGCTTCCEEECCSSCCC-CCG-GGGGCTTCCEEECCSSCCCBC
T ss_pred             ccccccc-c-cccchhcccCeEECCCCCCCC-Cc-ccccCCCCCEEECCCCCCC-CCh-hHcCCCCCCEEECCCCcCCCC
Confidence            4455553 2 346777888888888888884 44 3788888888888888887 465 588888888888888888866


Q ss_pred             CCCcccccccCcccccCC
Q 012213           82 IPEFGQYSFFNSTSFTGN   99 (468)
Q Consensus        82 ~p~~~~~~~~~~~~~~~n   99 (468)
                      +| +..++++..+++++|
T Consensus       367 ~~-l~~l~~L~~L~L~~N  383 (384)
T d2omza2         367 TP-LANLTRITQLGLNDQ  383 (384)
T ss_dssp             GG-GTTCTTCSEEECCCE
T ss_pred             hh-hccCCCCCEeeCCCC
Confidence            55 677778888887776


No 82 
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.81  E-value=4.3e-09  Score=91.04  Aligned_cols=81  Identities=20%  Similarity=0.301  Sum_probs=39.5

Q ss_pred             cccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCCCCCCcccccccCc
Q 012213           14 IGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSGEIPEFGQYSFFNS   93 (468)
Q Consensus        14 ~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~   93 (468)
                      +..|++|++|+|++|++++ +++ ++++++|++|++++|.+. .+| .+..++.|+.|++++|.+.. ++.+..+..+..
T Consensus        58 l~~l~nL~~L~Ls~N~l~~-~~~-l~~l~~L~~L~l~~n~~~-~~~-~l~~l~~L~~L~l~~~~~~~-~~~~~~l~~L~~  132 (199)
T d2omxa2          58 VEYLNNLTQINFSNNQLTD-ITP-LKNLTKLVDILMNNNQIA-DIT-PLANLTNLTGLTLFNNQITD-IDPLKNLTNLNR  132 (199)
T ss_dssp             GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCC-CCG-GGTTCTTCSEEECCSSCCCC-CGGGTTCTTCSE
T ss_pred             cccCCCcCcCccccccccC-ccc-ccCCcccccccccccccc-ccc-cccccccccccccccccccc-ccccchhhhhHH
Confidence            4455555555555555552 322 555555555555555554 333 24555555555555555443 222344444555


Q ss_pred             ccccCC
Q 012213           94 TSFTGN   99 (468)
Q Consensus        94 ~~~~~n   99 (468)
                      +.+++|
T Consensus       133 L~l~~n  138 (199)
T d2omxa2         133 LELSSN  138 (199)
T ss_dssp             EECCSS
T ss_pred             hhhhhh
Confidence            555544


No 83 
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=98.81  E-value=5.7e-11  Score=103.04  Aligned_cols=96  Identities=23%  Similarity=0.263  Sum_probs=83.0

Q ss_pred             CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213            1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG   80 (468)
Q Consensus         1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~   80 (468)
                      |++|+|+ .++ .+++|++|+.|+|++|+|+ .+|..+..+.+|+.|++++|.++ .++ .+..+++|+.|++++|+++.
T Consensus        55 Ls~n~I~-~i~-~l~~l~~L~~L~Ls~N~i~-~i~~~~~~~~~L~~L~l~~N~i~-~l~-~~~~l~~L~~L~L~~N~i~~  129 (198)
T d1m9la_          55 LSTNNIE-KIS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIA-SLS-GIEKLVNLRVLYMSNNKITN  129 (198)
T ss_dssp             CSEEEES-CCC-CHHHHTTCCEEECCEEEEC-SCSSHHHHHHHCCEEECSEEECC-CHH-HHHHHHHSSEEEESEEECCC
T ss_pred             CcccCCC-Ccc-cccCCccccChhhcccccc-ccccccccccccccccccccccc-ccc-cccccccccccccccchhcc
Confidence            6789998 776 5999999999999999999 89887788889999999999999 565 58899999999999999985


Q ss_pred             CC--CCcccccccCcccccCCCC
Q 012213           81 EI--PEFGQYSFFNSTSFTGNPH  101 (468)
Q Consensus        81 ~~--p~~~~~~~~~~~~~~~n~~  101 (468)
                      ..  ..+..++++..+++++|+.
T Consensus       130 ~~~~~~l~~l~~L~~L~L~~N~l  152 (198)
T d1m9la_         130 WGEIDKLAALDKLEDLLLAGNPL  152 (198)
T ss_dssp             HHHHHHHTTTTTCSEEEECSSHH
T ss_pred             ccccccccCCCccceeecCCCcc
Confidence            43  2467788899999999963


No 84 
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.79  E-value=4.3e-09  Score=91.91  Aligned_cols=92  Identities=12%  Similarity=0.171  Sum_probs=55.9

Q ss_pred             CCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCCC
Q 012213            2 SRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSGE   81 (468)
Q Consensus         2 ~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~   81 (468)
                      +.+.+++.++.  ..|.+|+.|++++|+++ .++ .+..+++|+.|+|++|.+++ +| .++.+++|+.|++++|++++ 
T Consensus        32 ~~~~~~~~~~~--~~L~~L~~L~l~~~~i~-~l~-~l~~l~~L~~L~L~~n~i~~-l~-~~~~l~~L~~L~l~~n~i~~-  104 (210)
T d1h6ta2          32 KKKSVTDAVTQ--NELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTD-IK-PLANLKNLGWLFLDENKVKD-  104 (210)
T ss_dssp             TCSCTTSEECH--HHHHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCCC-
T ss_pred             CcCccCCccCH--HHhcCccEEECcCCCCC-Cch-hHhhCCCCCEEeCCCccccC-cc-ccccCccccccccccccccc-
Confidence            34445544432  24556677777777766 344 36667777777777777763 44 35666777777777777663 


Q ss_pred             CCCcccccccCcccccCCC
Q 012213           82 IPEFGQYSFFNSTSFTGNP  100 (468)
Q Consensus        82 ~p~~~~~~~~~~~~~~~n~  100 (468)
                      +|.+..+.++..+++++|.
T Consensus       105 l~~l~~l~~L~~L~l~~~~  123 (210)
T d1h6ta2         105 LSSLKDLKKLKSLSLEHNG  123 (210)
T ss_dssp             GGGGTTCTTCCEEECTTSC
T ss_pred             ccccccccccccccccccc
Confidence            4455566666666666554


No 85 
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.77  E-value=5.2e-09  Score=91.37  Aligned_cols=72  Identities=24%  Similarity=0.348  Sum_probs=43.7

Q ss_pred             CCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccC
Q 012213            2 SRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFS   79 (468)
Q Consensus         2 ~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~   79 (468)
                      ++|.++ .++ .+..+++|++|+|++|++++ +| .+++|++|++|++++|+++ .+| .+..+++|+.|++++|.++
T Consensus        54 ~~~~i~-~l~-~l~~l~~L~~L~L~~n~i~~-l~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~~~~~  125 (210)
T d1h6ta2          54 NNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTD-IK-PLANLKNLGWLFLDENKVK-DLS-SLKDLKKLKSLSLEHNGIS  125 (210)
T ss_dssp             TTSCCC-CCT-TGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCC-CGG-GGTTCTTCCEEECTTSCCC
T ss_pred             cCCCCC-Cch-hHhhCCCCCEEeCCCccccC-cc-ccccCcccccccccccccc-ccc-ccccccccccccccccccc
Confidence            455665 333 35666667777777776663 44 3566666677777666666 355 3566666666666666554


No 86 
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=98.73  E-value=4.8e-09  Score=92.71  Aligned_cols=89  Identities=16%  Similarity=0.304  Sum_probs=65.2

Q ss_pred             CCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCCC
Q 012213            2 SRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSGE   81 (468)
Q Consensus         2 ~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~~   81 (468)
                      +++++...  ..+.++++|+.|++++|++++ ++ .++++++|+.|||++|+++ .+|+ ++.+++|+.|+|++|++++ 
T Consensus       137 ~~~~~~~~--~~~~~~~~L~~L~l~~n~~~~-~~-~l~~l~~L~~L~Ls~n~l~-~l~~-l~~l~~L~~L~Ls~N~lt~-  209 (227)
T d1h6ua2         137 DLNQITNI--SPLAGLTNLQYLSIGNAQVSD-LT-PLANLSKLTTLKADDNKIS-DISP-LASLPNLIEVHLKNNQISD-  209 (227)
T ss_dssp             CSSCCCCC--GGGGGCTTCCEEECCSSCCCC-CG-GGTTCTTCCEEECCSSCCC-CCGG-GGGCTTCCEEECTTSCCCB-
T ss_pred             hhhhhchh--hhhcccccccccccccccccc-ch-hhcccccceecccCCCccC-CChh-hcCCCCCCEEECcCCcCCC-
Confidence            34555432  246777888888888888873 33 3788888888888888888 4653 7888888888888888884 


Q ss_pred             CCCcccccccCccccc
Q 012213           82 IPEFGQYSFFNSTSFT   97 (468)
Q Consensus        82 ~p~~~~~~~~~~~~~~   97 (468)
                      +|.+..+.++..++++
T Consensus       210 i~~l~~l~~L~~L~ls  225 (227)
T d1h6ua2         210 VSPLANTSNLFIVTLT  225 (227)
T ss_dssp             CGGGTTCTTCCEEEEE
T ss_pred             CcccccCCCCCEEEee
Confidence            4456777777777665


No 87 
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=98.68  E-value=1.5e-08  Score=87.46  Aligned_cols=93  Identities=19%  Similarity=0.335  Sum_probs=75.1

Q ss_pred             CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213            1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG   80 (468)
Q Consensus         1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~   80 (468)
                      |++|+|++ +++ ++++++|+.|++++|.+. .+| .+.++++|+.|++++|.+.. ++ .+..+++|+.|++++|+++ 
T Consensus        69 Ls~N~l~~-~~~-l~~l~~L~~L~l~~n~~~-~~~-~l~~l~~L~~L~l~~~~~~~-~~-~~~~l~~L~~L~l~~n~l~-  141 (199)
T d2omxa2          69 FSNNQLTD-ITP-LKNLTKLVDILMNNNQIA-DIT-PLANLTNLTGLTLFNNQITD-ID-PLKNLTNLNRLELSSNTIS-  141 (199)
T ss_dssp             CCSSCCCC-CGG-GTTCTTCCEEECCSSCCC-CCG-GGTTCTTCSEEECCSSCCCC-CG-GGTTCTTCSEEECCSSCCC-
T ss_pred             cccccccC-ccc-ccCCcccccccccccccc-ccc-cccccccccccccccccccc-cc-ccchhhhhHHhhhhhhhhc-
Confidence            68899995 443 899999999999999998 566 48889999999999988874 43 5778889999999999887 


Q ss_pred             CCCCcccccccCcccccCCC
Q 012213           81 EIPEFGQYSFFNSTSFTGNP  100 (468)
Q Consensus        81 ~~p~~~~~~~~~~~~~~~n~  100 (468)
                      .+|.+..+..+..+.+.+|.
T Consensus       142 ~~~~l~~~~~L~~L~l~~n~  161 (199)
T d2omxa2         142 DISALSGLTSLQQLNFSSNQ  161 (199)
T ss_dssp             CCGGGTTCTTCSEEECCSSC
T ss_pred             cccccccccccccccccccc
Confidence            45566777777888877764


No 88 
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=98.67  E-value=7.7e-09  Score=98.66  Aligned_cols=70  Identities=21%  Similarity=0.375  Sum_probs=62.3

Q ss_pred             CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCc
Q 012213            1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHN   76 (468)
Q Consensus         1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N   76 (468)
                      |++|+|++ ++ .+..+++|+.|+|++|+|+ .+| ++.+|++|++|+|++|++++ +|+ +.++++|+.|+|++|
T Consensus       314 ls~n~l~~-l~-~l~~l~~L~~L~L~~n~l~-~l~-~l~~l~~L~~L~l~~N~l~~-l~~-l~~l~~L~~L~L~~N  383 (384)
T d2omza2         314 LYFNNISD-IS-PVSSLTKLQRLFFANNKVS-DVS-SLANLTNINWLSAGHNQISD-LTP-LANLTRITQLGLNDQ  383 (384)
T ss_dssp             CCSSCCSC-CG-GGGGCTTCCEEECCSSCCC-CCG-GGGGCTTCCEEECCSSCCCB-CGG-GTTCTTCSEEECCCE
T ss_pred             CCCCCCCC-Cc-ccccCCCCCEEECCCCCCC-CCh-hHcCCCCCCEEECCCCcCCC-Chh-hccCCCCCEeeCCCC
Confidence            57899995 44 3899999999999999999 566 79999999999999999996 554 899999999999998


No 89 
>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}
Probab=98.58  E-value=1e-07  Score=85.77  Aligned_cols=132  Identities=16%  Similarity=0.115  Sum_probs=90.1

Q ss_pred             cCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCC-CCCccceeEEEecCCeeEEEEeccCCCChhhhc
Q 012213          193 GGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIR-HRNIVRLKAFCSNKETNLLVYEYMPNGSLGEVL  271 (468)
Q Consensus       193 G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l  271 (468)
                      ++.+.||+... +++.++||+.........  ..+.+|...+..+. +--+.+++.+...++..++||+++++.++.+..
T Consensus        25 ~s~~~v~rv~~-~~~~~vlk~~~~~~~~~~--~~~~~E~~~l~~l~~~vpvP~vl~~~~~~~~~~lv~~~l~G~~~~~~~  101 (263)
T d1j7la_          25 MSPAKVYKLVG-ENENLYLKMTDSRYKGTT--YDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCSEEY  101 (263)
T ss_dssp             CSSSEEEEEEC-SSCEEEEEEECGGGTTST--TCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHHHHT
T ss_pred             CCCCcEEEEEe-CCCeEEEEEcCCCcccch--hhHHHHHHHHHHHhccCCCCcEEEEEecCCceEEEEEecccccccccc
Confidence            33467998865 566788888754433332  34778888876653 334567788888888899999999998876544


Q ss_pred             ccCCCCCCCHHHHHHHHHHHHHHHHHhhhcC-------------------------------------------------
Q 012213          272 HGKRGSFLKWEMRLKIAIEAAKGLSYLHHDC-------------------------------------------------  302 (468)
Q Consensus       272 ~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-------------------------------------------------  302 (468)
                      ...       .....++.++++.+..||+..                                                 
T Consensus       102 ~~~-------~~~~~~~~~l~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  174 (263)
T d1j7la_         102 EDE-------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFL  174 (263)
T ss_dssp             TTC-------SCHHHHHHHHHHHHHHHHTSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSSHHHHHHHH
T ss_pred             ccc-------ccHHHHHHHHHHHHHHHhccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccchHHHHHHHHH
Confidence            211       112334555666666666411                                                 


Q ss_pred             -------CCCeeecCCCCCcEEEcCCCceEEeecccccc
Q 012213          303 -------SPLIIHRDVKSNNILLNSDFEAHVADFGLAKY  334 (468)
Q Consensus       303 -------~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~~  334 (468)
                             ...++|+|+.|.||+++++..+.|+||+.+..
T Consensus       175 ~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDwe~a~~  213 (263)
T d1j7la_         175 KTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR  213 (263)
T ss_dssp             HHSCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred             HhcCCcCCcEEEEeeccCcceeecCCceEEEeechhccc
Confidence                   12378999999999999876677999987753


No 90 
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=98.53  E-value=3.1e-08  Score=87.30  Aligned_cols=69  Identities=17%  Similarity=0.274  Sum_probs=59.2

Q ss_pred             CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccC
Q 012213            1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSH   75 (468)
Q Consensus         1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~   75 (468)
                      +++|++++ ++ .++++++|+.|+|++|+++ .+| .+.++++|++|+|++|+++ .+|+ +.++++|+.|++++
T Consensus       158 l~~n~~~~-~~-~l~~l~~L~~L~Ls~n~l~-~l~-~l~~l~~L~~L~Ls~N~lt-~i~~-l~~l~~L~~L~lsn  226 (227)
T d1h6ua2         158 IGNAQVSD-LT-PLANLSKLTTLKADDNKIS-DIS-PLASLPNLIEVHLKNNQIS-DVSP-LANTSNLFIVTLTN  226 (227)
T ss_dssp             CCSSCCCC-CG-GGTTCTTCCEEECCSSCCC-CCG-GGGGCTTCCEEECTTSCCC-BCGG-GTTCTTCCEEEEEE
T ss_pred             cccccccc-ch-hhcccccceecccCCCccC-CCh-hhcCCCCCCEEECcCCcCC-CCcc-cccCCCCCEEEeeC
Confidence            46788874 33 4899999999999999999 565 4999999999999999999 5764 89999999999984


No 91 
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=98.45  E-value=1.9e-07  Score=87.36  Aligned_cols=88  Identities=25%  Similarity=0.255  Sum_probs=69.5

Q ss_pred             CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213            1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG   80 (468)
Q Consensus         1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~   80 (468)
                      |++|.|+ .+|+.   +++|++|+|++|+|+ .+|..+   .+|+.|++++|+++ .++.-   .+.|+.|++++|+++ 
T Consensus        45 Ls~~~L~-~lp~~---~~~L~~L~Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~-~l~~l---p~~L~~L~L~~n~l~-  111 (353)
T d1jl5a_          45 LNNLGLS-SLPEL---PPHLESLVASCNSLT-ELPELP---QSLKSLLVDNNNLK-ALSDL---PPLLEYLGVSNNQLE-  111 (353)
T ss_dssp             CTTSCCS-CCCSC---CTTCSEEECCSSCCS-SCCCCC---TTCCEEECCSSCCS-CCCSC---CTTCCEEECCSSCCS-
T ss_pred             eCCCCCC-CCCCC---CCCCCEEECCCCCCc-ccccch---hhhhhhhhhhcccc-hhhhh---ccccccccccccccc-
Confidence            6789998 78853   568999999999999 889765   46888899999988 56642   145899999999998 


Q ss_pred             CCCCcccccccCcccccCCCC
Q 012213           81 EIPEFGQYSFFNSTSFTGNPH  101 (468)
Q Consensus        81 ~~p~~~~~~~~~~~~~~~n~~  101 (468)
                      .+|.++.+..+..+.+++|..
T Consensus       112 ~lp~~~~l~~L~~L~l~~~~~  132 (353)
T d1jl5a_         112 KLPELQNSSFLKIIDVDNNSL  132 (353)
T ss_dssp             SCCCCTTCTTCCEEECCSSCC
T ss_pred             cccchhhhccceeeccccccc
Confidence            566777888888888877754


No 92 
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.36  E-value=1.2e-07  Score=84.20  Aligned_cols=94  Identities=16%  Similarity=0.167  Sum_probs=76.2

Q ss_pred             CCcccccCCcccccCCCCCEEEccCCcccccCCc-cccccccccEeeccCCcccccCCc-cccccccccccccc-CcccC
Q 012213            3 RNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPV-QITQIHILNYLNVSWNQLNASLPK-EMGNMKSLTSADFS-HNNFS   79 (468)
Q Consensus         3 ~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~-~~~~l~~L~~l~ls~N~l~g~~p~-~~~~l~~L~~l~ls-~N~l~   79 (468)
                      ++.|+ .+|.++.  ++++.|||++|+|+ .+|. .|.++++|++|+|++|.+...+|+ .|..++.++.+++. .|+++
T Consensus        17 ~~~l~-~iP~~l~--~~l~~L~Ls~n~i~-~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~   92 (242)
T d1xwdc1          17 ESKVT-EIPSDLP--RNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLL   92 (242)
T ss_dssp             SCSCS-SCCSCSC--SCCSEEEEESCCCC-EECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCC
T ss_pred             CCCCC-CcCCCCC--CCCCEEECcCCcCC-ccChhHhhccchhhhhhhccccccceeecccccccccccccccccccccc
Confidence            45677 8887663  58999999999999 5655 689999999999999998866654 57889999999876 46787


Q ss_pred             CCCCC-cccccccCcccccCCC
Q 012213           80 GEIPE-FGQYSFFNSTSFTGNP  100 (468)
Q Consensus        80 ~~~p~-~~~~~~~~~~~~~~n~  100 (468)
                      ...+. +..+.+++.+.+.+|.
T Consensus        93 ~~~~~~~~~l~~L~~l~l~~~~  114 (242)
T d1xwdc1          93 YINPEAFQNLPNLQYLLISNTG  114 (242)
T ss_dssp             EECTTSEECCTTCCEEEEESCC
T ss_pred             ccccccccccccccccccchhh
Confidence            77765 6778889999998874


No 93 
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.31  E-value=2.3e-07  Score=82.26  Aligned_cols=90  Identities=16%  Similarity=0.137  Sum_probs=71.7

Q ss_pred             CCCCcccccCCcccccCCCCCEEEccCCcccccCCc-cccccccccEeecc-CCcccccCCcccccccccccccccCccc
Q 012213            1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPV-QITQIHILNYLNVS-WNQLNASLPKEMGNMKSLTSADFSHNNF   78 (468)
Q Consensus         1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~-~~~~l~~L~~l~ls-~N~l~g~~p~~~~~l~~L~~l~ls~N~l   78 (468)
                      |++|+|+...+..|.++++|++|+|++|.+...+|. .|.++++++.|+++ .|++....|..|.++++|+.|++++|.+
T Consensus        36 Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l~l~~~~l  115 (242)
T d1xwdc1          36 FVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGI  115 (242)
T ss_dssp             EESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEEEEESCCC
T ss_pred             CcCCcCCccChhHhhccchhhhhhhccccccceeeccccccccccccccccccccccccccccccccccccccccchhhh
Confidence            468999843345789999999999999999876754 68899999999986 4788877777899999999999999999


Q ss_pred             CCCCCCccccccc
Q 012213           79 SGEIPEFGQYSFF   91 (468)
Q Consensus        79 ~~~~p~~~~~~~~   91 (468)
                      +.. |.+..+..+
T Consensus       116 ~~~-~~~~~~~~l  127 (242)
T d1xwdc1         116 KHL-PDVHKIHSL  127 (242)
T ss_dssp             CSC-CCCTTTCBS
T ss_pred             ccc-ccccccccc
Confidence            854 433333333


No 94 
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.30  E-value=3.3e-08  Score=82.23  Aligned_cols=45  Identities=24%  Similarity=0.230  Sum_probs=21.7

Q ss_pred             CCccccccccccEeeccCCcccccCC---cccccccccccccccCcccC
Q 012213           34 IPVQITQIHILNYLNVSWNQLNASLP---KEMGNMKSLTSADFSHNNFS   79 (468)
Q Consensus        34 ~p~~~~~l~~L~~l~ls~N~l~g~~p---~~~~~l~~L~~l~ls~N~l~   79 (468)
                      ++....++++|++||||+|+|+ .++   ..+..+++|+.|+|++|.++
T Consensus        57 l~~~~~~~~~L~~L~Ls~N~i~-~l~~~~~~~~~l~~L~~L~Ls~N~i~  104 (162)
T d1koha1          57 LRIIEENIPELLSLNLSNNRLY-RLDDMSSIVQKAPNLKILNLSGNELK  104 (162)
T ss_dssp             HHHHHHHCTTCCCCCCCSSCCC-CCSGGGTHHHHSTTCCCCCCTTSCCC
T ss_pred             hHHHHHhCCCCCEeeCCCcccc-CCchhHHHHhhCCcccccccccCccc
Confidence            3333344555555555555554 222   22344555555555555555


No 95 
>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}
Probab=98.29  E-value=2.1e-06  Score=76.45  Aligned_cols=130  Identities=18%  Similarity=0.110  Sum_probs=85.6

Q ss_pred             eEcccCC-cceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCC--CCccceeEEEecCCeeEEEEeccCCC
Q 012213          189 VIGRGGA-GVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRH--RNIVRLKAFCSNKETNLLVYEYMPNG  265 (468)
Q Consensus       189 ~ig~G~~-g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~g  265 (468)
                      .+..|.. +.||+....++..+++|......     ...+..|...++.+..  -.+.+++.+..+++..++||+|++|-
T Consensus        17 ~~~~G~s~~~v~r~~~~~~~~~vlK~~~~~~-----~~~l~~E~~~l~~L~~~gvpvP~v~~~~~~~~~~~~v~~~i~G~   91 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSGA-----LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQ   91 (255)
T ss_dssp             ECSCTTSSCEEEEEECTTSCCEEEEEECSCT-----TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSE
T ss_pred             EcCCcccCCeEEEEEeCCCCEEEEEeCCccC-----HhHHHHHHHHHHHHHhcCCCCCceeeecccccceEEEEEeeecc
Confidence            4455554 67899988888888999754322     1346777777766632  33667788888888889999999886


Q ss_pred             ChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhh---------------------------------------------
Q 012213          266 SLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHH---------------------------------------------  300 (468)
Q Consensus       266 sL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~---------------------------------------------  300 (468)
                      ++.+..       ...   ...+.++++.|.-||.                                             
T Consensus        92 ~~~~~~-------~~~---~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (255)
T d1nd4a_          92 DLLSSH-------LAP---AEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAEL  161 (255)
T ss_dssp             ETTTSC-------CCH---HHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHH
T ss_pred             cccccc-------ccH---HHHHHHHHHHHHHHccCChhhCCCcccchhhHHHHHHHHHHhhhccccccchhhhhHHHHH
Confidence            654321       110   1112233333333332                                             


Q ss_pred             ------c----CCCCeeecCCCCCcEEEcCCCceEEeeccccc
Q 012213          301 ------D----CSPLIIHRDVKSNNILLNSDFEAHVADFGLAK  333 (468)
Q Consensus       301 ------~----~~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~  333 (468)
                            .    ....++|+|+.|.||+++++..+.|+||+.+.
T Consensus       162 ~~~l~~~~~~~~~~~liHgD~~~~Nvl~~~~~~~~iID~~~~~  204 (255)
T d1nd4a_         162 FARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG  204 (255)
T ss_dssp             HHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred             HHHHHHhCCccCCceEEeCCCCCcceEEeCCceEEEEEchhcc
Confidence                  1    12338999999999999987667899998765


No 96 
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=98.03  E-value=4.2e-06  Score=77.85  Aligned_cols=76  Identities=28%  Similarity=0.269  Sum_probs=62.8

Q ss_pred             CCCCcccccCCcccccCCCCCEEEccCCcccccCCccccccccccEeeccCCcccccCCcccccccccccccccCcccCC
Q 012213            1 MSRNNFSGIIPVEIGHCLLLTYLDLSQNHLSGPIPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHNNFSG   80 (468)
Q Consensus         1 l~~N~l~g~~p~~~~~l~~L~~L~l~~n~l~g~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N~l~~   80 (468)
                      |++|+|+ .+|..+   .+|+.|++++|+++ .++.-.   +.|++|||++|.++ .+|. ++.+++|+.|++++|.+++
T Consensus        65 Ls~N~l~-~lp~~~---~~L~~L~l~~n~l~-~l~~lp---~~L~~L~L~~n~l~-~lp~-~~~l~~L~~L~l~~~~~~~  134 (353)
T d1jl5a_          65 ASCNSLT-ELPELP---QSLKSLLVDNNNLK-ALSDLP---PLLEYLGVSNNQLE-KLPE-LQNSSFLKIIDVDNNSLKK  134 (353)
T ss_dssp             CCSSCCS-SCCCCC---TTCCEEECCSSCCS-CCCSCC---TTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSC
T ss_pred             CCCCCCc-ccccch---hhhhhhhhhhcccc-hhhhhc---cccccccccccccc-cccc-hhhhccceeeccccccccc
Confidence            6899999 899654   57899999999999 676421   46999999999998 6885 6899999999999999987


Q ss_pred             CCCCcc
Q 012213           81 EIPEFG   86 (468)
Q Consensus        81 ~~p~~~   86 (468)
                      .++...
T Consensus       135 ~~~~~~  140 (353)
T d1jl5a_         135 LPDLPP  140 (353)
T ss_dssp             CCCCCT
T ss_pred             cccccc
Confidence            665433


No 97 
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.02  E-value=2.4e-07  Score=76.85  Aligned_cols=73  Identities=22%  Similarity=0.150  Sum_probs=56.8

Q ss_pred             CcccccCCCCCEEEccCCccccc--CCccccccccccEeeccCCcccccCCc-ccccccccccccccCcccCCCCCC
Q 012213           11 PVEIGHCLLLTYLDLSQNHLSGP--IPVQITQIHILNYLNVSWNQLNASLPK-EMGNMKSLTSADFSHNNFSGEIPE   84 (468)
Q Consensus        11 p~~~~~l~~L~~L~l~~n~l~g~--~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~l~~L~~l~ls~N~l~~~~p~   84 (468)
                      +....++++|++|+||+|+|+..  ++..+..|++|+.|||++|.++ .+++ .+.....|+.|++++|.++.....
T Consensus        58 ~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~-~l~~l~~l~~~~L~~L~L~~Npl~~~~~~  133 (162)
T d1koha1          58 RIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELK-SERELDKIKGLKLEELWLDGNSLSDTFRD  133 (162)
T ss_dssp             HHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCC-CGGGHHHHTTCCCSSCCCTTSTTSSSSSS
T ss_pred             HHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccc-cchhhhhhhccccceeecCCCCcCcCccc
Confidence            33345789999999999999932  3456788999999999999999 5665 333445789999999999876553


No 98 
>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}
Probab=97.77  E-value=6.8e-05  Score=70.97  Aligned_cols=77  Identities=18%  Similarity=0.191  Sum_probs=47.9

Q ss_pred             ceEcccCCcceEEEEcCC-CcEEEEEEecccCC--C---CCchhHHHHHHHHHhCCC-C--CCccceeEEEecCCeeEEE
Q 012213          188 NVIGRGGAGVVYRGVTPN-GEQVAVKKLLGITK--G---SSHDNGLSAEIRTLGKIR-H--RNIVRLKAFCSNKETNLLV  258 (468)
Q Consensus       188 ~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~--~---~~~~~~~~~e~~~l~~l~-h--~niv~l~~~~~~~~~~~lv  258 (468)
                      +.||.|....||+....+ ++.|+||.-.....  .   .....+...|.+.++.+. +  ..+.+++.+  +++..++|
T Consensus        32 ~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~--d~~~~~lv  109 (392)
T d2pula1          32 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV  109 (392)
T ss_dssp             EECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred             EEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE--cCCCCEEE
Confidence            468999999999998755 67899997543211  1   112234556777776552 2  345555554  45566899


Q ss_pred             EeccCCCC
Q 012213          259 YEYMPNGS  266 (468)
Q Consensus       259 ~e~~~~gs  266 (468)
                      ||++++..
T Consensus       110 mE~L~~~~  117 (392)
T d2pula1         110 MEDLSHLK  117 (392)
T ss_dssp             ECCCTTSE
T ss_pred             EeccCCcc
Confidence            99997654


No 99 
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.49  E-value=8.1e-06  Score=73.96  Aligned_cols=86  Identities=15%  Similarity=0.149  Sum_probs=65.9

Q ss_pred             ccccCCCCCEEEccCCccccc-CCccccccccccEeeccCCcccccCCcccccccccccccccCc-ccCCC-CCC-cccc
Q 012213           13 EIGHCLLLTYLDLSQNHLSGP-IPVQITQIHILNYLNVSWNQLNASLPKEMGNMKSLTSADFSHN-NFSGE-IPE-FGQY   88 (468)
Q Consensus        13 ~~~~l~~L~~L~l~~n~l~g~-~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~l~~L~~l~ls~N-~l~~~-~p~-~~~~   88 (468)
                      ......+|++|||+++.+++. ++.-+.++++|++|+|+++.+++..+..++.+++|+.|+++++ .++.. +.. ...+
T Consensus        41 ~~~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~  120 (284)
T d2astb2          41 EHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSC  120 (284)
T ss_dssp             SCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHC
T ss_pred             hhccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHH
Confidence            344567899999999998754 4556788999999999999999888888999999999999995 56521 111 2345


Q ss_pred             cccCcccccC
Q 012213           89 SFFNSTSFTG   98 (468)
Q Consensus        89 ~~~~~~~~~~   98 (468)
                      ++++.+++++
T Consensus       121 ~~L~~L~ls~  130 (284)
T d2astb2         121 SRLDELNLSW  130 (284)
T ss_dssp             TTCCEEECCC
T ss_pred             Hhcccccccc
Confidence            6777777765


No 100
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.31  E-value=1.4e-05  Score=76.99  Aligned_cols=100  Identities=11%  Similarity=0.116  Sum_probs=69.9

Q ss_pred             CCCCcccccC-CcccccCCCCCEEEccCCccc----ccCCccccccccccEeeccCCcccc----cCCccccc-cccccc
Q 012213            1 MSRNNFSGII-PVEIGHCLLLTYLDLSQNHLS----GPIPVQITQIHILNYLNVSWNQLNA----SLPKEMGN-MKSLTS   70 (468)
Q Consensus         1 l~~N~l~g~~-p~~~~~l~~L~~L~l~~n~l~----g~~p~~~~~l~~L~~l~ls~N~l~g----~~p~~~~~-l~~L~~   70 (468)
                      |++|++++.- ..-+..+++|++|+|++|+++    ..|+..+..+++|+.|||++|.++.    .+...+.. ..+|+.
T Consensus         9 ~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~~~~L~~   88 (460)
T d1z7xw1           9 IQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQK   88 (460)
T ss_dssp             EESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCE
T ss_pred             eeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcCCCCCCE
Confidence            3567776421 234566889999999999988    2455667889999999999999862    12233322 347999


Q ss_pred             ccccCcccCCC----CC-CcccccccCcccccCCC
Q 012213           71 ADFSHNNFSGE----IP-EFGQYSFFNSTSFTGNP  100 (468)
Q Consensus        71 l~ls~N~l~~~----~p-~~~~~~~~~~~~~~~n~  100 (468)
                      |+|++|+++..    ++ .+....+++.+++++|.
T Consensus        89 L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N~  123 (460)
T d1z7xw1          89 LSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNL  123 (460)
T ss_dssp             EECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSB
T ss_pred             EECCCCCccccccccccchhhcccccccccccccc
Confidence            99999998753    22 24556778888888875


No 101
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.31  E-value=1.8e-05  Score=76.18  Aligned_cols=83  Identities=16%  Similarity=0.107  Sum_probs=45.5

Q ss_pred             CCCCEEEccCCcccccCCc----cccccccccEeeccCCcccc----cCCcccc-cccccccccccCcccCCC----CCC
Q 012213           18 LLLTYLDLSQNHLSGPIPV----QITQIHILNYLNVSWNQLNA----SLPKEMG-NMKSLTSADFSHNNFSGE----IPE   84 (468)
Q Consensus        18 ~~L~~L~l~~n~l~g~~p~----~~~~l~~L~~l~ls~N~l~g----~~p~~~~-~l~~L~~l~ls~N~l~~~----~p~   84 (468)
                      ..|+.+++++|.++..-..    .+..+.+|+.|||++|.++.    .++..+. ..+.|+.|+|++|+|+..    +++
T Consensus       312 ~~L~~l~l~~~~l~~~~~~~l~~~~~~~~~L~~L~Ls~N~i~~~g~~~l~~~l~~~~~~L~~L~Ls~n~i~~~~~~~l~~  391 (460)
T d1z7xw1         312 CQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAA  391 (460)
T ss_dssp             CCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHH
T ss_pred             cccccccccccchhhhhhhhcccccccccchhhhheeeecccCcccchhhhhhhcccCCCCEEECCCCCCChHHHHHHHH
Confidence            4577777777776643222    23344567777777777653    1333332 345577777777776531    111


Q ss_pred             -cccccccCcccccCCC
Q 012213           85 -FGQYSFFNSTSFTGNP  100 (468)
Q Consensus        85 -~~~~~~~~~~~~~~n~  100 (468)
                       +.....+..+++++|+
T Consensus       392 ~l~~~~~L~~L~Ls~N~  408 (460)
T d1z7xw1         392 TLLANHSLRELDLSNNC  408 (460)
T ss_dssp             HHHHCCCCCEEECCSSS
T ss_pred             HHhcCCCCCEEECCCCc
Confidence             2233556666666664


No 102
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.14  E-value=0.00015  Score=65.27  Aligned_cols=83  Identities=19%  Similarity=0.188  Sum_probs=48.2

Q ss_pred             CCCCCEEEccCC--ccccc-CCccccccccccEeeccCC-cccccCCcccccccccccccccCc-ccCCCCC-Ccccccc
Q 012213           17 CLLLTYLDLSQN--HLSGP-IPVQITQIHILNYLNVSWN-QLNASLPKEMGNMKSLTSADFSHN-NFSGEIP-EFGQYSF   90 (468)
Q Consensus        17 l~~L~~L~l~~n--~l~g~-~p~~~~~l~~L~~l~ls~N-~l~g~~p~~~~~l~~L~~l~ls~N-~l~~~~p-~~~~~~~   90 (468)
                      +++|+.|+++++  .++.. +..-..++++|+.|+|++| .+++..+..+..+++|+.|+++++ .++.... .++.+++
T Consensus       147 ~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~~~~L~~L~L~~C~~i~~~~l~~L~~~~~  226 (284)
T d2astb2         147 SETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPT  226 (284)
T ss_dssp             CTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTT
T ss_pred             ccccchhhhcccccccccccccccccccccccccccccccCCCchhhhhhcccCcCCEEECCCCCCCChHHHHHHhcCCC
Confidence            356777777653  23321 3333455677777777664 466556666777777777777763 5554332 3455556


Q ss_pred             cCcccccCC
Q 012213           91 FNSTSFTGN   99 (468)
Q Consensus        91 ~~~~~~~~n   99 (468)
                      ++.+++.++
T Consensus       227 L~~L~l~~~  235 (284)
T d2astb2         227 LKTLQVFGI  235 (284)
T ss_dssp             CCEEECTTS
T ss_pred             CCEEeeeCC
Confidence            666666543


No 103
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=97.04  E-value=7.4e-05  Score=69.28  Aligned_cols=89  Identities=12%  Similarity=0.081  Sum_probs=59.6

Q ss_pred             cccccCCCCCEEEccCCccccc-----CCccccccccccEeeccCCccccc----CCcccccccccccccccCcccCCCC
Q 012213           12 VEIGHCLLLTYLDLSQNHLSGP-----IPVQITQIHILNYLNVSWNQLNAS----LPKEMGNMKSLTSADFSHNNFSGEI   82 (468)
Q Consensus        12 ~~~~~l~~L~~L~l~~n~l~g~-----~p~~~~~l~~L~~l~ls~N~l~g~----~p~~~~~l~~L~~l~ls~N~l~~~~   82 (468)
                      ..+..+..|+.|+|++|+++..     +...+..+++|+.|+|++|.++..    +...+..+++|+.|+|++|++++.-
T Consensus       180 ~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n~i~~~g  259 (344)
T d2ca6a1         180 KTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARG  259 (344)
T ss_dssp             HHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHH
T ss_pred             chhhhhhhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcCccCchh
Confidence            3455677888888888887632     334567788888888888887632    4456677888888888888876431


Q ss_pred             C-Cc----c--cccccCcccccCCC
Q 012213           83 P-EF----G--QYSFFNSTSFTGNP  100 (468)
Q Consensus        83 p-~~----~--~~~~~~~~~~~~n~  100 (468)
                      . .+    .  ....+..+++++|.
T Consensus       260 ~~~l~~~l~~~~~~~L~~L~ls~N~  284 (344)
T d2ca6a1         260 AAAVVDAFSKLENIGLQTLRLQYNE  284 (344)
T ss_dssp             HHHHHHHHHTCSSCCCCEEECCSSC
T ss_pred             hHHHHHHhhhccCCCCCEEECCCCc
Confidence            1 11    1  12356667777764


No 104
>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}
Probab=97.02  E-value=0.0013  Score=60.12  Aligned_cols=134  Identities=13%  Similarity=0.148  Sum_probs=75.2

Q ss_pred             cceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCC-----cccee--EEEecCCeeEEEEeccCCCChh
Q 012213          196 GVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRN-----IVRLK--AFCSNKETNLLVYEYMPNGSLG  268 (468)
Q Consensus       196 g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-----iv~l~--~~~~~~~~~~lv~e~~~~gsL~  268 (468)
                      -.||++..++|+.|++|......   ...+++..|...+..+....     .+..-  ......+..+.++++++|..+.
T Consensus        36 N~vy~v~~~dg~~~VlK~~rp~~---~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~~~~  112 (325)
T d1zyla1          36 NRVYQFQDEDRRRFVVKFYRPER---WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGRQFE  112 (325)
T ss_dssp             SEEEEECCTTCCCEEEEEECTTT---SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCEECC
T ss_pred             ceeEEEEcCCCCEEEEEEeCCCC---CCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCcCCC
Confidence            57999999999999999865322   22366778888776663221     11111  1223456678899999864332


Q ss_pred             h-----h---------ccc-------CCCCCCCHH-------------------HHHHHHHHHHHHHHHhh----hcCCC
Q 012213          269 E-----V---------LHG-------KRGSFLKWE-------------------MRLKIAIEAAKGLSYLH----HDCSP  304 (468)
Q Consensus       269 ~-----~---------l~~-------~~~~~l~~~-------------------~~~~i~~~ia~~l~~LH----~~~~~  304 (468)
                      .     +         +|.       ......++.                   .+..+...+.+.++.+.    .....
T Consensus       113 ~~~~~~~~~lG~~LA~lH~~~~~~~~~~r~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~p~  192 (325)
T d1zyla1         113 ADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWREDFTV  192 (325)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCSCSCC
T ss_pred             CCCHHHHHHHHHHHHHHHhhcccCCccccCCCCHHHHhhhhHHHHHHcCcCCHHHHHHHHHHHHHHHHHHHHhccccCCc
Confidence            1     0         010       001111111                   11111222222233332    22245


Q ss_pred             CeeecCCCCCcEEEcCCCceEEeecccccc
Q 012213          305 LIIHRDVKSNNILLNSDFEAHVADFGLAKY  334 (468)
Q Consensus       305 ~ivH~dlk~~Nill~~~~~~kl~Dfgla~~  334 (468)
                      .++|+|+.+.|||++++  ..++||+-+..
T Consensus       193 ~liHgDlh~~NvL~~~~--~~~IDFdd~~~  220 (325)
T d1zyla1         193 LRLHGDCHAGNILWRDG--PMFVDLDDARN  220 (325)
T ss_dssp             EECCSSCSGGGEEESSS--EEECCCTTCCE
T ss_pred             eeecCCCCcccEEEeCC--ceEEechhccc
Confidence            68999999999999754  45899997763


No 105
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=96.90  E-value=9.7e-05  Score=68.48  Aligned_cols=86  Identities=12%  Similarity=0.159  Sum_probs=62.2

Q ss_pred             ccCCCCCEEEccCCcccc----cCCccccccccccEeeccCCccccc-----CCcccccccccccccccCcccCCC----
Q 012213           15 GHCLLLTYLDLSQNHLSG----PIPVQITQIHILNYLNVSWNQLNAS-----LPKEMGNMKSLTSADFSHNNFSGE----   81 (468)
Q Consensus        15 ~~l~~L~~L~l~~n~l~g----~~p~~~~~l~~L~~l~ls~N~l~g~-----~p~~~~~l~~L~~l~ls~N~l~~~----   81 (468)
                      .....|+.|++++|+++.    .+...+..+.+|+.|+|++|.++..     +...+..+++|+.|+|++|.++..    
T Consensus       155 ~~~~~L~~l~l~~n~i~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~  234 (344)
T d2ca6a1         155 KNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSA  234 (344)
T ss_dssp             HTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHH
T ss_pred             ccCcccceeecccccccccccccccchhhhhhhhcccccccccccccccccchhhhhcchhhhccccccccccccccccc
Confidence            356789999999998862    2444567788999999999998632     345577888999999999987532    


Q ss_pred             C-CCcccccccCcccccCCC
Q 012213           82 I-PEFGQYSFFNSTSFTGNP  100 (468)
Q Consensus        82 ~-p~~~~~~~~~~~~~~~n~  100 (468)
                      + ..+.....+..+++++|.
T Consensus       235 L~~~l~~~~~L~~L~Ls~n~  254 (344)
T d2ca6a1         235 LAIALKSWPNLRELGLNDCL  254 (344)
T ss_dssp             HHHHGGGCTTCCEEECTTCC
T ss_pred             ccccccccccchhhhhhcCc
Confidence            1 123455667777777664


No 106
>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}
Probab=96.49  E-value=0.0053  Score=57.47  Aligned_cols=72  Identities=18%  Similarity=0.246  Sum_probs=46.6

Q ss_pred             ceEcccCCcceEEEEcCC--------CcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCc-cceeEEEecCCeeEEE
Q 012213          188 NVIGRGGAGVVYRGVTPN--------GEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNI-VRLKAFCSNKETNLLV  258 (468)
Q Consensus       188 ~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni-v~l~~~~~~~~~~~lv  258 (468)
                      +.|+-|-.-.+|+...++        ...|.++..- .  . .......+|..+++.+.-.++ .++++++..    .+|
T Consensus        48 ~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~--~-~~~idr~~E~~i~~~ls~~gl~Pkll~~~~~----g~I  119 (395)
T d1nw1a_          48 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-N--P-ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRL  119 (395)
T ss_dssp             EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-S--C-CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEE
T ss_pred             EEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-C--c-chhhHHHHHHHHHHHHHhCCCCCeEEEEcCC----ceE
Confidence            568888888999988654        2456666542 2  1 122345678888877743344 467777643    789


Q ss_pred             EeccCCCCh
Q 012213          259 YEYMPNGSL  267 (468)
Q Consensus       259 ~e~~~~gsL  267 (468)
                      +||+++-.+
T Consensus       120 ~efi~g~~l  128 (395)
T d1nw1a_         120 EEYIPSRPL  128 (395)
T ss_dssp             ECCCCEEEC
T ss_pred             EEEeccccC
Confidence            999987544


No 107
>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}
Probab=96.15  E-value=0.0044  Score=56.00  Aligned_cols=31  Identities=26%  Similarity=0.331  Sum_probs=27.3

Q ss_pred             CCCeeecCCCCCcEEEcCCCceEEeeccccc
Q 012213          303 SPLIIHRDVKSNNILLNSDFEAHVADFGLAK  333 (468)
Q Consensus       303 ~~~ivH~dlk~~Nill~~~~~~kl~Dfgla~  333 (468)
                      +.+++|+|+.+.||+++.+...-|.||+.+.
T Consensus       182 ~~giIHgDl~~dNvl~~~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         182 PAGVIHADLFQDNVFFLGDELSGLIDFYFAC  212 (316)
T ss_dssp             CEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred             ccccccCCcchhhhhcccccceeEecccccc
Confidence            4559999999999999998777899999875


No 108
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=95.89  E-value=0.0014  Score=53.44  Aligned_cols=84  Identities=10%  Similarity=0.013  Sum_probs=54.0

Q ss_pred             cCCCCCEEEccCC-ccccc----CCccccccccccEeeccCCccccc----CCcccccccccccccccCcccCCCCC-C-
Q 012213           16 HCLLLTYLDLSQN-HLSGP----IPVQITQIHILNYLNVSWNQLNAS----LPKEMGNMKSLTSADFSHNNFSGEIP-E-   84 (468)
Q Consensus        16 ~l~~L~~L~l~~n-~l~g~----~p~~~~~l~~L~~l~ls~N~l~g~----~p~~~~~l~~L~~l~ls~N~l~~~~p-~-   84 (468)
                      +.+.|+.|+|+++ .++..    +-..+...++|+.|+|++|.+...    +...+...+.|+.|+|++|.++..-- . 
T Consensus        13 n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l   92 (167)
T d1pgva_          13 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL   92 (167)
T ss_dssp             TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred             CCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHH
Confidence            4578999999874 45522    223466778899999999888632    22234556788999999998874211 1 


Q ss_pred             ---cccccccCcccccCC
Q 012213           85 ---FGQYSFFNSTSFTGN   99 (468)
Q Consensus        85 ---~~~~~~~~~~~~~~n   99 (468)
                         +..-..+..+++++|
T Consensus        93 ~~aL~~n~sL~~L~l~~n  110 (167)
T d1pgva_          93 LRSTLVTQSIVEFKADNQ  110 (167)
T ss_dssp             HHHTTTTCCCSEEECCCC
T ss_pred             HHHHHhCCcCCEEECCCC
Confidence               223345666777665


No 109
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=95.53  E-value=0.002  Score=52.47  Aligned_cols=67  Identities=18%  Similarity=0.120  Sum_probs=51.4

Q ss_pred             ccccCCCCCEEEccCCccccc----CCccccccccccEeeccCCccccc----CCcccccccccccccccCcccC
Q 012213           13 EIGHCLLLTYLDLSQNHLSGP----IPVQITQIHILNYLNVSWNQLNAS----LPKEMGNMKSLTSADFSHNNFS   79 (468)
Q Consensus        13 ~~~~l~~L~~L~l~~n~l~g~----~p~~~~~l~~L~~l~ls~N~l~g~----~p~~~~~l~~L~~l~ls~N~l~   79 (468)
                      .+...+.|+.|+|++|.++..    +-..+...++|+.|+|++|.++..    +-..+...++|+.|++++|.+.
T Consensus        39 ~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l~~aL~~n~sL~~L~l~~n~~~  113 (167)
T d1pgva_          39 AACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQS  113 (167)
T ss_dssp             HHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSC
T ss_pred             HHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHHHHHHHhCCcCCEEECCCCcCC
Confidence            456678899999999999843    223456778999999999998842    2234667788999999999765


No 110
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=91.85  E-value=0.023  Score=45.68  Aligned_cols=65  Identities=14%  Similarity=0.132  Sum_probs=46.8

Q ss_pred             ccCCCCCEEEccC-Cccccc----CCccccccccccEeeccCCccccc----CCcccccccccccccccCcccC
Q 012213           15 GHCLLLTYLDLSQ-NHLSGP----IPVQITQIHILNYLNVSWNQLNAS----LPKEMGNMKSLTSADFSHNNFS   79 (468)
Q Consensus        15 ~~l~~L~~L~l~~-n~l~g~----~p~~~~~l~~L~~l~ls~N~l~g~----~p~~~~~l~~L~~l~ls~N~l~   79 (468)
                      .+.+.|+.|+|++ |.++..    +-..+...+.|+.|+|++|.++..    +-..+...++|+.+++++|.++
T Consensus        14 ~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~   87 (166)
T d1io0a_          14 NNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS   87 (166)
T ss_dssp             TTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred             hcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhcccccc
Confidence            4678899999997 556522    223456788999999999988632    2223556678999999998876


No 111
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=91.42  E-value=0.037  Score=44.40  Aligned_cols=67  Identities=16%  Similarity=0.199  Sum_probs=48.7

Q ss_pred             ccccCCCCCEEEccCCcccccC----CccccccccccEeeccCCccccc----CCcccccccccccc--cccCcccC
Q 012213           13 EIGHCLLLTYLDLSQNHLSGPI----PVQITQIHILNYLNVSWNQLNAS----LPKEMGNMKSLTSA--DFSHNNFS   79 (468)
Q Consensus        13 ~~~~l~~L~~L~l~~n~l~g~~----p~~~~~l~~L~~l~ls~N~l~g~----~p~~~~~l~~L~~l--~ls~N~l~   79 (468)
                      .+...++|+.|+|++|.++..-    -..+...++|+.|++++|.++..    +-..+...++|+.+  ++++|.+.
T Consensus        41 al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~l~~~l~~~~~L~~l~L~l~~n~i~  117 (166)
T d1io0a_          41 ALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLG  117 (166)
T ss_dssp             HHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCC
T ss_pred             HHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHHHHHHHHhCccccEEeeccCCCcCc
Confidence            4456889999999999987432    23456789999999999998632    23456777888864  45667664


No 112
>d1cjaa_ d.144.1.3 (A:) Actin-fragmin kinase, catalytic domain {Physarum polycephalum [TaxId: 5791]}
Probab=72.72  E-value=10  Score=32.64  Aligned_cols=135  Identities=10%  Similarity=0.008  Sum_probs=75.3

Q ss_pred             EcccCCcceEEEEcCCCcEEEEEEecccCCCCCchhHHHHHHHHHhCCCCCCccceeEEE--------------------
Q 012213          190 IGRGGAGVVYRGVTPNGEQVAVKKLLGITKGSSHDNGLSAEIRTLGKIRHRNIVRLKAFC--------------------  249 (468)
Q Consensus       190 ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~--------------------  249 (468)
                      +..+|.+-|+-+... +..+++|.-     .....+.+-.++...-.++-|...-+. .+                    
T Consensus        76 ~s~~Gs~Gv~FV~~e-~gaiVlK~s-----~tta~E~y~~eLAr~LGvpvPqmRvI~-~~~~E~~~~~~~~l~~~e~d~~  148 (342)
T d1cjaa_          76 RSEKGTEGLFFVETE-SGVFIVKRS-----TNIESETFCSLLCMRLGLHAPKVRVVS-SNSEEGTNMLECLAAIDKSFRV  148 (342)
T ss_dssp             ECCSTTSCEEEEEES-SCEEEEECC-----TTHHHHHHHHHHHHHHTCCCCCEEEEE-SSSHHHHHHHHHHHHHCSSSCH
T ss_pred             EeecCCceEEEEEcC-CceEEEecC-----CchHHHHHHHHHHHHhCCCCCceEEec-CCCHHHHHHHHHHhcCCChhHH
Confidence            344455556655443 455677742     123335577777777777777765432 11                    


Q ss_pred             ---ecCCeeEEEEeccCCCChhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhhhcCCCCeeecCC-CCCcEEEcCCC-ce
Q 012213          250 ---SNKETNLLVYEYMPNGSLGEVLHGKRGSFLKWEMRLKIAIEAAKGLSYLHHDCSPLIIHRDV-KSNNILLNSDF-EA  324 (468)
Q Consensus       250 ---~~~~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dl-k~~Nill~~~~-~~  324 (468)
                         ......+++|||.+|..+.+.-..............+ +-.|+.-=.++++..+.|+++|+- .+.|++++.++ .+
T Consensus       149 I~sel~~A~~liMeYvpG~~l~e~~~~~a~~~fs~~~l~~-LGkIiaFDifInN~DR~PL~Wrn~GN~~Niml~~n~~~~  227 (342)
T d1cjaa_         149 ITTLANQANILLMELVRGITLNKLTTTSAPEVLTKSTMQQ-LGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATV  227 (342)
T ss_dssp             HHHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCHHHHHH-HHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCE
T ss_pred             HHHHHhcccceeeeccCCccccccccccchhhhcHHHHHH-hhhHHHHHHHHcCCccccccccCCCCccceEEecCCcEE
Confidence               1123457999999987765543211111122222111 111222225678777777888742 79999999877 67


Q ss_pred             EEeecccc
Q 012213          325 HVADFGLA  332 (468)
Q Consensus       325 kl~Dfgla  332 (468)
                      ..+|=|..
T Consensus       228 ~~IDs~i~  235 (342)
T d1cjaa_         228 VPIDSKII  235 (342)
T ss_dssp             EECSCCCC
T ss_pred             EEecCCcc
Confidence            77775544


No 113
>d1kq8a_ a.4.5.14 (A:) HFH-1 (HNF-3 forkhead homolog-1) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=31.94  E-value=19  Score=23.56  Aligned_cols=27  Identities=15%  Similarity=0.247  Sum_probs=23.0

Q ss_pred             HHHHhhcccCCCCCCCHHHHHHHHHhc
Q 012213          433 FVAMLCVQEHGVERPTMREVVQMLAQA  459 (468)
Q Consensus       433 ~l~~~c~~~~P~~RPt~~ev~~~L~~~  459 (468)
                      .++...+...|++|-|.+||.+.+++-
T Consensus         3 ~LI~~Ai~~sp~~~ltL~eIy~~i~~~   29 (75)
T d1kq8a_           3 ALITMAIRDSAGGRLTLAEINEYLMGK   29 (75)
T ss_dssp             HHHHHHHTTSSSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCccHHHHHHHHHHh
Confidence            467777888999999999999999754


Done!