Query 012217
Match_columns 468
No_of_seqs 221 out of 1765
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 00:17:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012217.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012217hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02410 UDP-glucoronosyl/UDP- 100.0 4.1E-74 8.9E-79 579.6 39.7 416 1-456 1-450 (451)
2 PLN02555 limonoid glucosyltran 100.0 2.4E-73 5.2E-78 576.1 41.8 434 1-458 1-471 (480)
3 PLN02173 UDP-glucosyl transfer 100.0 8.7E-72 1.9E-76 560.2 38.8 405 10-455 5-447 (449)
4 PLN02863 UDP-glucoronosyl/UDP- 100.0 1.1E-70 2.4E-75 558.4 42.9 432 1-459 1-474 (477)
5 PLN02992 coniferyl-alcohol glu 100.0 4.6E-71 1E-75 558.0 37.9 411 10-457 5-470 (481)
6 PLN02534 UDP-glycosyltransfera 100.0 2.2E-70 4.8E-75 555.2 41.4 424 10-458 8-488 (491)
7 PLN02562 UDP-glycosyltransfera 100.0 1.2E-70 2.5E-75 556.1 38.8 412 10-455 6-448 (448)
8 PLN02207 UDP-glycosyltransfera 100.0 2E-70 4.4E-75 552.3 40.2 421 9-458 2-467 (468)
9 PLN00164 glucosyltransferase; 100.0 4.4E-70 9.5E-75 555.8 39.3 419 9-458 2-475 (480)
10 PLN02152 indole-3-acetate beta 100.0 5.4E-70 1.2E-74 548.1 38.8 407 10-455 3-455 (455)
11 PLN02210 UDP-glucosyl transfer 100.0 7.1E-70 1.5E-74 550.9 39.9 417 10-455 8-454 (456)
12 PLN02670 transferase, transfer 100.0 7.7E-69 1.7E-73 541.4 40.5 421 10-458 6-467 (472)
13 PLN02764 glycosyltransferase f 100.0 1.1E-68 2.3E-73 536.1 40.7 405 10-463 5-452 (453)
14 PLN03015 UDP-glucosyl transfer 100.0 9.7E-69 2.1E-73 538.0 39.2 413 10-454 3-466 (470)
15 PLN02554 UDP-glycosyltransfera 100.0 1.3E-68 2.9E-73 546.9 38.1 422 10-458 2-480 (481)
16 PLN03004 UDP-glycosyltransfera 100.0 7.4E-68 1.6E-72 532.1 36.8 406 10-445 3-450 (451)
17 PLN03007 UDP-glucosyltransfera 100.0 3.5E-67 7.6E-72 537.1 42.5 426 10-457 5-481 (482)
18 PLN00414 glycosyltransferase f 100.0 1.4E-67 3E-72 531.5 38.7 393 10-457 4-441 (446)
19 PLN02208 glycosyltransferase f 100.0 9.7E-68 2.1E-72 532.0 37.4 393 10-457 4-440 (442)
20 PLN02448 UDP-glycosyltransfera 100.0 1.7E-67 3.7E-72 536.8 39.7 416 10-456 10-457 (459)
21 PLN02167 UDP-glycosyltransfera 100.0 8.8E-67 1.9E-71 532.7 39.4 422 10-458 3-474 (475)
22 PF00201 UDPGT: UDP-glucoronos 100.0 2.7E-48 6E-53 403.9 0.5 201 196-436 225-426 (500)
23 PHA03392 egt ecdysteroid UDP-g 100.0 6.6E-45 1.4E-49 373.4 22.5 226 192-458 240-468 (507)
24 KOG1192 UDP-glucuronosyl and U 100.0 9.6E-42 2.1E-46 354.7 16.4 380 10-435 5-438 (496)
25 TIGR01426 MGT glycosyltransfer 100.0 1.1E-39 2.4E-44 329.0 30.0 336 16-435 1-375 (392)
26 cd03784 GT1_Gtf_like This fami 100.0 1.5E-39 3.3E-44 329.2 19.4 340 11-435 1-387 (401)
27 COG1819 Glycosyl transferases, 100.0 1.9E-37 4.1E-42 310.2 19.3 168 268-459 236-403 (406)
28 PRK12446 undecaprenyldiphospho 99.8 1.7E-19 3.7E-24 178.3 21.4 145 267-428 183-335 (352)
29 COG0707 MurG UDP-N-acetylgluco 99.8 7.3E-17 1.6E-21 158.0 22.5 150 268-431 182-340 (357)
30 PF13528 Glyco_trans_1_3: Glyc 99.8 4.3E-17 9.3E-22 159.8 18.8 122 268-413 191-317 (318)
31 TIGR00661 MJ1255 conserved hyp 99.7 2.4E-15 5.3E-20 147.5 19.5 124 269-417 188-315 (321)
32 PRK00726 murG undecaprenyldiph 99.6 4.3E-13 9.4E-18 133.6 22.8 114 328-453 236-354 (357)
33 cd03785 GT1_MurG MurG is an N- 99.5 2.1E-12 4.6E-17 128.2 22.5 137 268-417 180-325 (350)
34 PF04101 Glyco_tran_28_C: Glyc 99.4 1.4E-14 3.1E-19 128.1 -4.4 137 271-417 1-145 (167)
35 TIGR01133 murG undecaprenyldip 99.3 1.9E-10 4.2E-15 114.0 21.9 77 336-417 243-322 (348)
36 TIGR03590 PseG pseudaminic aci 99.2 7.9E-10 1.7E-14 106.0 16.4 103 270-383 171-278 (279)
37 COG4671 Predicted glycosyl tra 99.2 5.6E-09 1.2E-13 98.5 20.5 134 268-415 218-364 (400)
38 TIGR00215 lpxB lipid-A-disacch 99.2 6.4E-10 1.4E-14 111.7 15.1 167 268-451 190-383 (385)
39 PF03033 Glyco_transf_28: Glyc 99.1 1.5E-11 3.3E-16 105.1 2.5 54 13-76 1-54 (139)
40 PRK00025 lpxB lipid-A-disaccha 98.9 1E-08 2.2E-13 103.0 13.9 90 338-433 256-359 (380)
41 PRK13608 diacylglycerol glucos 98.9 4E-08 8.6E-13 99.1 16.3 166 268-458 201-373 (391)
42 cd03814 GT1_like_2 This family 98.9 2.7E-06 5.9E-11 84.0 29.2 128 270-417 197-333 (364)
43 PRK13609 diacylglycerol glucos 98.8 4.5E-08 9.7E-13 98.4 14.0 133 268-417 201-339 (380)
44 PLN02605 monogalactosyldiacylg 98.8 2E-07 4.3E-12 93.8 17.4 134 268-416 205-347 (382)
45 PLN02871 UDP-sulfoquinovose:DA 98.7 2.5E-05 5.4E-10 80.8 30.5 139 271-430 264-415 (465)
46 cd03817 GT1_UGDG_like This fam 98.5 0.00015 3.2E-09 71.5 28.7 143 270-432 202-360 (374)
47 cd03825 GT1_wcfI_like This fam 98.4 0.001 2.2E-08 65.9 31.6 93 326-429 243-344 (365)
48 TIGR03492 conserved hypothetic 98.4 4.2E-06 9E-11 84.4 13.8 133 269-417 205-365 (396)
49 cd03794 GT1_wbuB_like This fam 98.4 0.00012 2.7E-09 72.4 23.8 144 269-431 219-381 (394)
50 cd03800 GT1_Sucrose_synthase T 98.4 0.00045 9.8E-09 69.4 27.3 92 327-429 283-382 (398)
51 cd03823 GT1_ExpE7_like This fa 98.3 0.00095 2.1E-08 65.5 28.3 133 268-417 189-330 (359)
52 cd03821 GT1_Bme6_like This fam 98.3 0.00096 2.1E-08 65.6 27.2 91 326-429 261-359 (375)
53 cd03808 GT1_cap1E_like This fa 98.3 0.00074 1.6E-08 65.9 26.2 147 268-429 186-343 (359)
54 cd03801 GT1_YqgM_like This fam 98.2 0.0027 5.9E-08 61.9 29.2 82 325-417 254-342 (374)
55 cd03818 GT1_ExpC_like This fam 98.2 0.003 6.4E-08 63.9 29.3 96 327-431 281-382 (396)
56 cd04962 GT1_like_5 This family 98.2 0.0035 7.7E-08 62.3 28.8 92 327-429 253-350 (371)
57 cd03820 GT1_amsD_like This fam 98.1 0.0061 1.3E-07 59.1 29.5 145 270-431 178-335 (348)
58 cd03816 GT1_ALG1_like This fam 98.1 0.0016 3.4E-08 66.4 24.7 91 328-431 295-400 (415)
59 cd03796 GT1_PIG-A_like This fa 98.0 0.0076 1.6E-07 61.0 28.5 128 269-417 192-334 (398)
60 COG3980 spsG Spore coat polysa 97.9 0.0023 4.9E-08 59.4 19.6 140 271-428 160-302 (318)
61 KOG3349 Predicted glycosyltran 97.8 9.4E-05 2E-09 61.6 7.4 110 271-387 5-126 (170)
62 PRK15484 lipopolysaccharide 1, 97.7 0.0024 5.3E-08 64.2 18.7 93 325-427 255-355 (380)
63 cd04946 GT1_AmsK_like This fam 97.7 0.0017 3.7E-08 65.9 17.1 161 270-451 230-406 (407)
64 cd04955 GT1_like_6 This family 97.7 0.056 1.2E-06 53.3 27.7 124 273-417 196-331 (363)
65 cd03795 GT1_like_4 This family 97.7 0.00079 1.7E-08 66.4 13.7 144 270-431 191-348 (357)
66 PF04007 DUF354: Protein of un 97.7 0.016 3.4E-07 56.8 22.1 126 268-414 178-308 (335)
67 cd03786 GT1_UDP-GlcNAc_2-Epime 97.7 0.00046 1E-08 68.7 12.0 131 268-417 197-338 (363)
68 TIGR00236 wecB UDP-N-acetylglu 97.7 0.00072 1.6E-08 67.5 13.4 153 270-449 198-360 (365)
69 PRK15427 colanic acid biosynth 97.6 0.0035 7.7E-08 63.6 18.1 161 270-455 222-404 (406)
70 cd03804 GT1_wbaZ_like This fam 97.6 0.00066 1.4E-08 67.2 12.3 127 272-417 197-327 (351)
71 cd03811 GT1_WabH_like This fam 97.6 0.049 1.1E-06 52.7 25.1 130 269-417 188-333 (353)
72 PRK09922 UDP-D-galactose:(gluc 97.5 0.0033 7.1E-08 62.6 16.0 144 270-431 180-342 (359)
73 PRK05749 3-deoxy-D-manno-octul 97.5 0.0022 4.7E-08 65.6 14.9 87 338-432 314-405 (425)
74 PF13844 Glyco_transf_41: Glyc 97.5 0.0011 2.4E-08 67.2 11.2 121 267-395 282-414 (468)
75 cd03798 GT1_wlbH_like This fam 97.4 0.008 1.7E-07 58.8 17.5 132 269-417 201-345 (377)
76 COG1519 KdtA 3-deoxy-D-manno-o 97.4 0.012 2.5E-07 58.2 17.2 99 328-434 301-405 (419)
77 cd05844 GT1_like_7 Glycosyltra 97.4 0.0063 1.4E-07 60.4 16.1 93 326-429 244-350 (367)
78 PF00534 Glycos_transf_1: Glyc 97.4 0.0041 8.9E-08 54.6 12.8 146 268-428 13-171 (172)
79 cd03799 GT1_amsK_like This is 97.4 0.0068 1.5E-07 59.6 15.7 144 269-429 178-341 (355)
80 cd03822 GT1_ecORF704_like This 97.2 0.021 4.7E-07 56.1 17.3 94 326-431 246-350 (366)
81 PF13692 Glyco_trans_1_4: Glyc 97.1 0.002 4.3E-08 54.1 7.9 127 271-416 3-135 (135)
82 cd04951 GT1_WbdM_like This fam 97.1 0.018 4E-07 56.7 16.0 127 269-416 187-326 (360)
83 cd03807 GT1_WbnK_like This fam 97.1 0.028 6E-07 54.9 17.1 78 327-417 251-333 (365)
84 TIGR02918 accessory Sec system 97.1 0.021 4.5E-07 59.5 16.5 102 327-434 376-485 (500)
85 TIGR03449 mycothiol_MshA UDP-N 97.1 0.028 6E-07 56.8 17.0 93 327-430 283-383 (405)
86 PRK10307 putative glycosyl tra 97.1 0.035 7.5E-07 56.4 17.6 114 327-456 284-407 (412)
87 cd03805 GT1_ALG2_like This fam 97.0 0.014 3E-07 58.6 14.5 92 326-429 279-378 (392)
88 TIGR02468 sucrsPsyn_pln sucros 97.0 0.35 7.6E-06 54.0 25.5 96 327-431 548-653 (1050)
89 PLN02949 transferase, transfer 97.0 0.58 1.3E-05 48.3 29.8 96 326-432 334-440 (463)
90 cd03809 GT1_mtfB_like This fam 97.0 0.01 2.2E-07 58.4 12.4 127 271-417 196-337 (365)
91 COG5017 Uncharacterized conser 96.9 0.0026 5.7E-08 52.2 6.2 107 272-395 2-122 (161)
92 TIGR02149 glgA_Coryne glycogen 96.8 0.061 1.3E-06 53.8 17.2 148 270-430 201-367 (388)
93 PRK14089 ipid-A-disaccharide s 96.8 0.0036 7.8E-08 61.7 7.6 147 270-433 168-332 (347)
94 PF02350 Epimerase_2: UDP-N-ac 96.8 0.0065 1.4E-07 60.1 9.4 131 267-417 178-319 (346)
95 TIGR03088 stp2 sugar transfera 96.7 0.076 1.6E-06 53.0 16.6 92 327-429 255-352 (374)
96 cd03819 GT1_WavL_like This fam 96.7 0.044 9.5E-07 53.9 14.8 151 269-431 184-347 (355)
97 cd03802 GT1_AviGT4_like This f 96.7 0.045 9.7E-07 53.4 14.3 129 271-416 172-308 (335)
98 PRK09814 beta-1,6-galactofuran 96.7 0.0084 1.8E-07 59.1 9.0 109 326-451 206-330 (333)
99 cd04949 GT1_gtfA_like This fam 96.6 0.042 9.2E-07 54.7 13.9 101 326-434 260-364 (372)
100 TIGR03087 stp1 sugar transfera 96.6 0.095 2.1E-06 52.9 16.4 91 327-430 280-377 (397)
101 TIGR02472 sucr_P_syn_N sucrose 96.5 0.051 1.1E-06 55.8 14.1 92 326-428 316-419 (439)
102 COG3914 Spy Predicted O-linked 96.5 0.037 8.1E-07 56.5 12.5 133 267-411 427-573 (620)
103 PHA01633 putative glycosyl tra 96.5 0.094 2E-06 51.4 14.9 103 325-433 199-324 (335)
104 cd03812 GT1_CapH_like This fam 96.4 0.08 1.7E-06 52.1 14.1 130 269-417 191-332 (358)
105 cd03813 GT1_like_3 This family 96.3 0.18 3.9E-06 52.3 16.8 92 326-428 353-455 (475)
106 cd04950 GT1_like_1 Glycosyltra 96.2 0.095 2E-06 52.5 13.6 78 327-417 254-341 (373)
107 cd03792 GT1_Trehalose_phosphor 96.1 0.22 4.8E-06 49.7 16.0 90 327-429 252-351 (372)
108 PLN02501 digalactosyldiacylgly 96.1 2.5 5.4E-05 45.3 29.1 75 329-417 603-682 (794)
109 PRK14098 glycogen synthase; Pr 95.8 0.62 1.3E-05 48.5 17.9 135 270-414 307-449 (489)
110 PRK15179 Vi polysaccharide bio 95.8 0.54 1.2E-05 50.8 17.7 96 326-430 573-674 (694)
111 TIGR02095 glgA glycogen/starch 95.7 0.53 1.1E-05 48.8 17.1 130 269-415 290-436 (473)
112 cd03791 GT1_Glycogen_synthase_ 95.4 0.8 1.7E-05 47.4 16.9 134 269-415 295-441 (476)
113 cd03806 GT1_ALG11_like This fa 95.3 0.45 9.8E-06 48.5 14.5 80 326-417 304-393 (419)
114 TIGR03568 NeuC_NnaA UDP-N-acet 95.2 0.25 5.4E-06 49.3 12.1 129 269-414 201-337 (365)
115 PRK10017 colanic acid biosynth 95.2 0.47 1E-05 48.3 13.9 180 260-456 225-424 (426)
116 PHA01630 putative group 1 glyc 95.0 0.82 1.8E-05 45.0 14.9 75 334-416 197-294 (331)
117 PRK01021 lpxB lipid-A-disaccha 95.0 0.71 1.5E-05 48.5 14.8 156 267-433 411-589 (608)
118 KOG4626 O-linked N-acetylgluco 95.0 0.083 1.8E-06 54.3 7.7 121 268-395 757-888 (966)
119 PF02684 LpxB: Lipid-A-disacch 94.9 0.39 8.6E-06 47.8 12.1 169 263-446 180-367 (373)
120 PF06722 DUF1205: Protein of u 94.8 0.016 3.5E-07 45.6 1.9 52 257-308 28-84 (97)
121 PRK00654 glgA glycogen synthas 94.6 1.9 4.2E-05 44.5 17.2 134 269-415 281-427 (466)
122 TIGR02470 sucr_synth sucrose s 94.6 8.8 0.00019 42.1 30.1 93 327-428 619-726 (784)
123 PRK15490 Vi polysaccharide bio 94.6 1.7 3.7E-05 45.5 16.1 74 326-410 454-532 (578)
124 PLN02275 transferase, transfer 94.3 0.8 1.7E-05 45.8 13.0 75 327-414 286-371 (371)
125 PLN02846 digalactosyldiacylgly 93.3 4.1 8.9E-05 41.9 16.1 73 331-417 288-364 (462)
126 PF13524 Glyco_trans_1_2: Glyc 93.2 0.96 2.1E-05 34.9 9.1 54 352-417 9-63 (92)
127 TIGR03713 acc_sec_asp1 accesso 92.0 2.7 5.9E-05 44.0 13.2 93 327-435 409-508 (519)
128 PLN02939 transferase, transfer 91.7 8.2 0.00018 43.0 16.6 83 327-415 837-930 (977)
129 PRK10125 putative glycosyl tra 91.5 5.5 0.00012 40.4 14.5 114 272-410 243-365 (405)
130 PLN02316 synthase/transferase 91.5 10 0.00022 42.9 17.3 114 327-452 900-1029(1036)
131 COG0381 WecB UDP-N-acetylgluco 90.8 3.6 7.8E-05 40.7 11.7 135 269-427 204-349 (383)
132 PF06258 Mito_fiss_Elm1: Mitoc 90.5 2.9 6.4E-05 40.6 10.9 58 336-395 221-281 (311)
133 TIGR02193 heptsyl_trn_I lipopo 88.9 3.1 6.7E-05 40.5 9.9 140 262-414 172-319 (319)
134 cd01635 Glycosyltransferase_GT 87.4 3.6 7.7E-05 36.9 8.8 50 326-377 160-217 (229)
135 TIGR02400 trehalose_OtsA alpha 87.0 4.2 9.1E-05 41.9 9.8 102 334-455 343-455 (456)
136 TIGR02919 accessory Sec system 85.3 22 0.00047 36.4 13.8 123 268-417 282-412 (438)
137 PRK13609 diacylglycerol glucos 84.1 1.5 3.2E-05 43.9 4.8 38 10-47 4-42 (380)
138 cd03793 GT1_Glycogen_synthase_ 83.8 4.5 9.9E-05 42.4 8.2 78 336-417 467-553 (590)
139 COG0763 LpxB Lipid A disacchar 83.1 22 0.00049 35.2 12.1 172 268-454 187-379 (381)
140 PRK14099 glycogen synthase; Pr 83.1 62 0.0014 33.6 16.9 86 326-417 349-448 (485)
141 COG4370 Uncharacterized protei 81.1 2.3 5E-05 40.4 4.4 91 327-427 294-387 (412)
142 cd03788 GT1_TPS Trehalose-6-Ph 79.1 8.6 0.00019 39.7 8.4 103 332-454 346-459 (460)
143 PF13477 Glyco_trans_4_2: Glyc 78.6 4.8 0.0001 33.4 5.4 51 12-74 1-51 (139)
144 PF04464 Glyphos_transf: CDP-G 78.5 6.4 0.00014 39.2 7.1 111 327-449 252-366 (369)
145 PRK02261 methylaspartate mutas 77.2 7.9 0.00017 32.6 6.2 46 9-54 2-47 (137)
146 PF02441 Flavoprotein: Flavopr 75.3 5.1 0.00011 33.3 4.5 45 11-56 1-45 (129)
147 COG0438 RfaG Glycosyltransfera 74.3 77 0.0017 29.7 17.6 133 271-417 200-343 (381)
148 PLN00142 sucrose synthase 74.1 11 0.00024 41.5 7.7 71 349-428 670-749 (815)
149 cd03789 GT1_LPS_heptosyltransf 73.5 21 0.00046 33.8 9.0 94 270-371 122-223 (279)
150 cd02067 B12-binding B12 bindin 72.8 8 0.00017 31.4 5.1 36 12-47 1-36 (119)
151 PF13579 Glyco_trans_4_4: Glyc 72.2 3.7 8E-05 34.5 3.1 25 26-50 6-30 (160)
152 PRK10307 putative glycosyl tra 69.0 7.5 0.00016 39.2 5.0 38 11-48 1-42 (412)
153 PF13439 Glyco_transf_4: Glyco 68.4 5.7 0.00012 34.0 3.5 31 19-49 10-40 (177)
154 PLN03063 alpha,alpha-trehalose 68.1 21 0.00045 39.7 8.4 100 339-457 371-478 (797)
155 cd03802 GT1_AviGT4_like This f 66.6 10 0.00022 36.6 5.2 38 11-48 1-46 (335)
156 PF01075 Glyco_transf_9: Glyco 66.5 20 0.00044 33.1 7.0 94 268-371 104-208 (247)
157 PRK00654 glgA glycogen synthas 64.6 10 0.00022 39.2 5.0 37 11-47 1-43 (466)
158 PF05159 Capsule_synth: Capsul 64.5 20 0.00044 33.8 6.7 42 329-373 185-226 (269)
159 PRK02797 4-alpha-L-fucosyltran 62.4 1.5E+02 0.0034 28.7 11.9 81 327-414 206-292 (322)
160 cd03805 GT1_ALG2_like This fam 62.2 13 0.00028 37.0 5.1 36 12-47 2-39 (392)
161 PRK10964 ADP-heptose:LPS hepto 61.4 47 0.001 32.2 8.8 131 270-415 179-321 (322)
162 cd07039 TPP_PYR_POX Pyrimidine 61.2 90 0.0019 27.0 9.6 28 343-372 63-96 (164)
163 PLN02846 digalactosyldiacylgly 61.0 13 0.00027 38.4 4.8 38 10-47 4-46 (462)
164 cd04951 GT1_WbdM_like This fam 60.0 9.9 0.00022 37.0 3.8 29 19-47 10-38 (360)
165 KOG0853 Glycosyltransferase [C 59.5 14 0.00031 38.0 4.8 64 352-426 377-440 (495)
166 PF12146 Hydrolase_4: Putative 58.7 20 0.00043 26.9 4.3 34 11-44 16-49 (79)
167 TIGR02195 heptsyl_trn_II lipop 58.4 57 0.0012 31.8 8.9 96 268-371 173-276 (334)
168 PF02310 B12-binding: B12 bind 58.4 33 0.00071 27.6 6.1 42 12-53 2-43 (121)
169 cd07025 Peptidase_S66 LD-Carbo 57.9 27 0.00059 33.4 6.3 77 281-376 45-123 (282)
170 TIGR02201 heptsyl_trn_III lipo 57.8 44 0.00094 32.8 7.9 98 268-371 180-285 (344)
171 COG1484 DnaC DNA replication p 57.5 20 0.00044 33.7 5.2 46 11-56 106-151 (254)
172 PLN02470 acetolactate synthase 56.3 85 0.0018 33.5 10.3 90 275-372 2-109 (585)
173 PRK10916 ADP-heptose:LPS hepto 53.8 64 0.0014 31.7 8.4 45 11-55 1-47 (348)
174 PRK10422 lipopolysaccharide co 53.4 71 0.0015 31.5 8.6 97 269-371 183-287 (352)
175 cd01635 Glycosyltransferase_GT 53.4 19 0.00041 32.0 4.2 26 20-45 12-37 (229)
176 TIGR02095 glgA glycogen/starch 53.1 21 0.00046 36.8 5.1 38 11-48 1-44 (473)
177 cd02070 corrinoid_protein_B12- 53.1 37 0.00079 30.6 6.0 42 10-51 82-123 (201)
178 cd07062 Peptidase_S66_mccF_lik 51.3 39 0.00084 32.8 6.2 76 281-375 49-126 (308)
179 PRK08305 spoVFB dipicolinate s 49.9 37 0.00081 30.5 5.3 43 10-52 5-47 (196)
180 cd07037 TPP_PYR_MenD Pyrimidin 47.6 49 0.0011 28.7 5.6 27 344-372 61-93 (162)
181 PF02951 GSH-S_N: Prokaryotic 47.5 34 0.00074 28.0 4.3 37 12-48 2-41 (119)
182 PRK14501 putative bifunctional 47.5 44 0.00094 36.8 6.5 110 332-457 347-463 (726)
183 COG3660 Predicted nucleoside-d 47.3 2.6E+02 0.0056 26.6 11.3 91 271-371 164-271 (329)
184 PF07429 Glyco_transf_56: 4-al 47.1 3E+02 0.0064 27.2 12.7 82 327-415 245-332 (360)
185 cd02071 MM_CoA_mut_B12_BD meth 46.7 49 0.0011 27.0 5.3 38 12-49 1-38 (122)
186 TIGR02370 pyl_corrinoid methyl 46.6 51 0.0011 29.6 5.8 46 10-55 84-129 (197)
187 cd03795 GT1_like_4 This family 46.4 29 0.00062 33.6 4.6 30 20-49 13-42 (357)
188 COG0859 RfaF ADP-heptose:LPS h 46.3 91 0.002 30.5 8.1 95 269-371 175-276 (334)
189 PF10093 DUF2331: Uncharacteri 45.9 1.3E+02 0.0028 30.0 8.8 50 329-383 246-298 (374)
190 PF04127 DFP: DNA / pantothena 44.9 22 0.00049 31.6 3.2 30 17-48 24-53 (185)
191 COG0801 FolK 7,8-dihydro-6-hyd 44.7 44 0.00094 28.9 4.7 36 271-306 3-38 (160)
192 PRK07313 phosphopantothenoylcy 44.2 35 0.00075 30.3 4.2 41 12-53 3-43 (182)
193 PRK10916 ADP-heptose:LPS hepto 43.4 46 0.001 32.7 5.5 96 268-371 179-286 (348)
194 PF09001 DUF1890: Domain of un 42.8 28 0.0006 29.1 3.1 32 25-56 14-45 (139)
195 COG0771 MurD UDP-N-acetylmuram 41.0 1.2E+02 0.0025 31.2 7.9 35 10-49 7-41 (448)
196 cd07038 TPP_PYR_PDC_IPDC_like 40.6 39 0.00085 29.2 4.0 26 348-373 62-93 (162)
197 PRK08322 acetolactate synthase 40.1 99 0.0021 32.6 7.7 26 347-372 65-96 (547)
198 PRK07710 acetolactate synthase 40.1 1.4E+02 0.0029 31.8 8.8 28 343-372 78-111 (571)
199 PRK06249 2-dehydropantoate 2-r 39.3 64 0.0014 31.2 5.7 34 10-48 5-38 (313)
200 COG2185 Sbm Methylmalonyl-CoA 39.2 46 0.00099 28.2 3.9 38 9-46 11-48 (143)
201 cd03791 GT1_Glycogen_synthase_ 39.1 42 0.00091 34.5 4.7 21 27-47 22-42 (476)
202 TIGR00421 ubiX_pad polyprenyl 38.5 42 0.00092 29.7 3.9 41 13-54 2-42 (181)
203 cd02069 methionine_synthase_B1 38.3 83 0.0018 28.7 5.9 42 10-51 88-129 (213)
204 TIGR03449 mycothiol_MshA UDP-N 38.0 36 0.00078 34.0 3.9 29 20-48 19-47 (405)
205 PF08323 Glyco_transf_5: Starc 37.3 27 0.00059 32.6 2.6 23 26-48 21-43 (245)
206 TIGR02852 spore_dpaB dipicolin 37.3 62 0.0013 28.9 4.7 39 12-50 2-40 (187)
207 PRK06276 acetolactate synthase 36.9 1.3E+02 0.0027 32.2 7.9 26 347-372 65-96 (586)
208 PRK10964 ADP-heptose:LPS hepto 36.7 57 0.0012 31.6 4.9 44 11-54 1-46 (322)
209 PF01975 SurE: Survival protei 35.8 32 0.00069 31.0 2.7 30 24-53 13-42 (196)
210 PF01075 Glyco_transf_9: Glyco 35.5 25 0.00055 32.5 2.1 97 10-118 105-212 (247)
211 COG0299 PurN Folate-dependent 35.3 2.2E+02 0.0048 25.6 7.7 104 286-413 67-172 (200)
212 cd03819 GT1_WavL_like This fam 35.3 77 0.0017 30.6 5.7 29 20-48 9-37 (355)
213 PLN02929 NADH kinase 34.8 2E+02 0.0043 27.8 8.0 98 283-417 32-138 (301)
214 TIGR03837 efp_adjacent_2 conse 34.8 2.7E+02 0.0058 27.7 8.9 58 20-77 10-70 (371)
215 PRK08155 acetolactate synthase 34.7 2.3E+02 0.0049 30.1 9.4 26 347-372 78-109 (564)
216 cd01840 SGNH_hydrolase_yrhL_li 34.1 94 0.002 26.2 5.3 38 268-306 50-87 (150)
217 PF02374 ArsA_ATPase: Anion-tr 34.0 62 0.0014 31.3 4.6 40 12-51 2-42 (305)
218 PRK10422 lipopolysaccharide co 33.9 60 0.0013 32.0 4.6 46 10-55 5-52 (352)
219 PRK06029 3-octaprenyl-4-hydrox 33.9 73 0.0016 28.4 4.6 43 12-55 3-46 (185)
220 COG2910 Putative NADH-flavin r 33.7 39 0.00084 30.1 2.7 27 19-47 7-33 (211)
221 PRK06371 translation initiatio 33.7 76 0.0016 31.1 5.0 19 99-117 240-258 (329)
222 PRK14099 glycogen synthase; Pr 33.5 73 0.0016 33.1 5.3 38 10-47 3-46 (485)
223 PRK05920 aromatic acid decarbo 33.4 76 0.0016 28.7 4.7 45 10-55 3-47 (204)
224 COG2159 Predicted metal-depend 33.2 1.7E+02 0.0036 28.2 7.3 92 258-361 117-210 (293)
225 cd07035 TPP_PYR_POX_like Pyrim 33.1 2.9E+02 0.0064 23.2 9.4 28 344-373 60-93 (155)
226 PF02558 ApbA: Ketopantoate re 32.7 72 0.0016 26.8 4.4 28 29-56 12-39 (151)
227 PRK08335 translation initiatio 32.5 1.3E+02 0.0027 28.8 6.2 18 99-116 202-219 (275)
228 PRK06732 phosphopantothenate-- 32.2 56 0.0012 30.2 3.8 31 15-47 19-49 (229)
229 cd03812 GT1_CapH_like This fam 32.2 48 0.001 32.1 3.6 31 19-49 10-40 (358)
230 PF01210 NAD_Gly3P_dh_N: NAD-d 31.9 36 0.00077 29.2 2.3 31 13-48 2-32 (157)
231 PRK08978 acetolactate synthase 31.9 3.2E+02 0.0068 28.9 9.9 28 343-372 63-96 (548)
232 PLN02316 synthase/transferase 31.3 85 0.0018 35.8 5.6 39 10-48 587-631 (1036)
233 cd02065 B12-binding_like B12 b 31.2 1.2E+02 0.0026 24.4 5.3 40 12-51 1-40 (125)
234 PRK12446 undecaprenyldiphospho 30.9 1.3E+02 0.0029 29.7 6.4 96 270-371 3-120 (352)
235 PF10727 Rossmann-like: Rossma 30.8 1.9E+02 0.0042 23.9 6.4 44 1-49 1-44 (127)
236 TIGR02699 archaeo_AfpA archaeo 30.8 89 0.0019 27.5 4.6 33 21-53 9-43 (174)
237 PF10933 DUF2827: Protein of u 30.7 1.9E+02 0.0042 28.6 7.2 99 331-453 257-362 (364)
238 TIGR00118 acolac_lg acetolacta 30.7 3.3E+02 0.0071 28.8 9.8 26 347-372 66-97 (558)
239 PRK07525 sulfoacetaldehyde ace 30.4 2.6E+02 0.0056 29.9 9.0 26 347-372 70-101 (588)
240 PF00731 AIRC: AIR carboxylase 30.3 3.5E+02 0.0076 23.2 10.9 139 271-435 2-148 (150)
241 TIGR02193 heptsyl_trn_I lipopo 30.2 71 0.0015 30.9 4.4 44 12-55 1-46 (319)
242 PF05225 HTH_psq: helix-turn-h 30.0 90 0.0019 20.5 3.5 26 402-429 1-26 (45)
243 TIGR02398 gluc_glyc_Psyn gluco 30.0 2.7E+02 0.0058 29.0 8.6 111 330-459 365-485 (487)
244 PF13450 NAD_binding_8: NAD(P) 29.8 63 0.0014 23.3 3.0 19 28-46 9-27 (68)
245 TIGR00524 eIF-2B_rel eIF-2B al 29.6 74 0.0016 30.8 4.3 18 99-116 222-239 (303)
246 cd03798 GT1_wlbH_like This fam 29.6 72 0.0015 30.5 4.3 31 20-50 13-43 (377)
247 PF05693 Glycogen_syn: Glycoge 29.4 1E+02 0.0023 32.7 5.5 94 335-433 461-566 (633)
248 PRK12921 2-dehydropantoate 2-r 29.4 98 0.0021 29.6 5.2 32 11-47 1-32 (305)
249 PRK06048 acetolactate synthase 29.3 3E+02 0.0066 29.1 9.3 28 343-372 70-103 (561)
250 COG1703 ArgK Putative periplas 29.2 1.2E+02 0.0025 29.3 5.3 38 10-47 51-88 (323)
251 KOG2941 Beta-1,4-mannosyltrans 29.0 5.8E+02 0.013 25.3 13.2 147 267-431 252-425 (444)
252 PF00070 Pyr_redox: Pyridine n 28.8 77 0.0017 23.4 3.4 23 26-48 10-32 (80)
253 PRK06372 translation initiatio 28.5 1.5E+02 0.0032 27.9 5.9 67 28-115 124-192 (253)
254 PRK05772 translation initiatio 28.2 2.9E+02 0.0063 27.5 8.1 19 100-118 272-290 (363)
255 TIGR02113 coaC_strep phosphopa 28.0 80 0.0017 27.8 3.9 41 12-53 2-42 (177)
256 TIGR02700 flavo_MJ0208 archaeo 28.0 1E+02 0.0022 28.5 4.8 36 19-54 8-45 (234)
257 cd03789 GT1_LPS_heptosyltransf 28.0 89 0.0019 29.5 4.6 44 12-55 1-46 (279)
258 cd02034 CooC The accessory pro 28.0 1.3E+02 0.0028 24.3 4.9 37 12-48 1-37 (116)
259 PF12695 Abhydrolase_5: Alpha/ 27.9 1.1E+02 0.0024 24.9 4.7 35 14-48 2-36 (145)
260 PRK08334 translation initiatio 27.7 1.2E+02 0.0026 30.0 5.4 18 99-116 263-280 (356)
261 PRK02155 ppnK NAD(+)/NADH kina 27.6 1.4E+02 0.003 28.8 5.7 55 342-417 62-120 (291)
262 PRK04885 ppnK inorganic polyph 27.6 1.3E+02 0.0029 28.4 5.5 53 344-417 36-94 (265)
263 COG1422 Predicted membrane pro 27.6 1.8E+02 0.0039 26.1 5.8 37 405-441 59-96 (201)
264 COG1618 Predicted nucleotide k 27.5 1.8E+02 0.0038 25.5 5.6 56 10-75 5-60 (179)
265 PF14626 RNase_Zc3h12a_2: Zc3h 27.2 61 0.0013 26.4 2.6 30 24-53 9-38 (122)
266 PRK05720 mtnA methylthioribose 27.1 1E+02 0.0023 30.4 4.8 19 99-117 250-268 (344)
267 COG3340 PepE Peptidase E [Amin 27.0 4.2E+02 0.0091 24.2 8.1 44 258-302 23-66 (224)
268 TIGR01281 DPOR_bchL light-inde 27.0 1.1E+02 0.0024 28.7 5.0 36 11-46 1-36 (268)
269 PTZ00318 NADH dehydrogenase-li 26.9 80 0.0017 32.1 4.2 44 1-49 1-44 (424)
270 PRK00652 lpxK tetraacyldisacch 26.6 1.2E+02 0.0026 29.7 5.1 37 11-47 50-88 (325)
271 PRK06522 2-dehydropantoate 2-r 26.5 92 0.002 29.7 4.4 30 12-46 2-31 (304)
272 COG4088 Predicted nucleotide k 26.5 82 0.0018 28.7 3.5 36 11-46 2-37 (261)
273 cd03799 GT1_amsK_like This is 26.4 1.1E+02 0.0024 29.5 5.0 26 23-48 13-38 (355)
274 TIGR00511 ribulose_e2b2 ribose 26.3 1.4E+02 0.0031 28.8 5.6 18 99-116 208-225 (301)
275 PRK01231 ppnK inorganic polyph 26.2 3.4E+02 0.0074 26.1 8.1 54 343-417 62-119 (295)
276 PRK14092 2-amino-4-hydroxy-6-h 26.2 1.5E+02 0.0032 25.8 5.1 30 268-297 6-35 (163)
277 cd01452 VWA_26S_proteasome_sub 26.1 3.5E+02 0.0077 24.1 7.6 62 13-76 111-175 (187)
278 PRK11253 ldcA L,D-carboxypepti 26.0 2.2E+02 0.0048 27.6 6.9 74 280-373 47-128 (305)
279 PF00282 Pyridoxal_deC: Pyrido 25.8 71 0.0015 31.9 3.5 69 345-415 103-190 (373)
280 COG0297 GlgA Glycogen synthase 25.8 4.1E+02 0.0088 27.7 9.0 165 271-456 294-477 (487)
281 PRK06718 precorrin-2 dehydroge 25.6 4.9E+02 0.011 23.3 15.5 151 262-437 5-166 (202)
282 PRK13010 purU formyltetrahydro 25.6 6E+02 0.013 24.4 9.8 102 288-413 159-262 (289)
283 TIGR00512 salvage_mtnA S-methy 25.6 1.2E+02 0.0025 29.9 4.8 19 99-117 250-268 (331)
284 cd03807 GT1_WbnK_like This fam 25.5 1.1E+02 0.0024 29.1 4.9 36 14-49 5-40 (365)
285 KOG0100 Molecular chaperones G 25.5 2.3E+02 0.005 28.4 6.7 51 363-413 498-552 (663)
286 COG1255 Uncharacterized protei 25.2 72 0.0016 25.9 2.7 77 12-114 16-101 (129)
287 PRK13011 formyltetrahydrofolat 25.2 6.1E+02 0.013 24.3 10.0 115 288-430 155-271 (286)
288 TIGR00745 apbA_panE 2-dehydrop 25.2 85 0.0018 29.8 3.9 27 29-55 5-31 (293)
289 PRK06725 acetolactate synthase 24.9 2.7E+02 0.0058 29.6 7.9 26 347-372 79-110 (570)
290 PF01380 SIS: SIS domain SIS d 24.7 2.1E+02 0.0045 23.0 5.7 35 18-52 60-94 (131)
291 PRK08535 translation initiatio 24.6 1.5E+02 0.0033 28.8 5.4 18 99-116 213-230 (310)
292 TIGR00521 coaBC_dfp phosphopan 24.5 1.2E+02 0.0026 30.5 4.9 44 10-54 3-46 (390)
293 PRK09620 hypothetical protein; 24.5 1.3E+02 0.0028 27.8 4.7 20 28-47 33-52 (229)
294 PRK13604 luxD acyl transferase 24.3 1.5E+02 0.0032 28.8 5.2 35 10-44 36-70 (307)
295 PRK06457 pyruvate dehydrogenas 24.2 5.6E+02 0.012 27.0 10.1 27 343-371 64-96 (549)
296 PF02776 TPP_enzyme_N: Thiamin 24.2 1.8E+02 0.0039 25.2 5.5 30 342-373 63-98 (172)
297 PRK08229 2-dehydropantoate 2-r 24.1 1.1E+02 0.0025 29.8 4.6 33 10-47 2-34 (341)
298 PRK08617 acetolactate synthase 24.0 2.8E+02 0.0061 29.3 7.8 26 347-372 69-100 (552)
299 PF01695 IstB_IS21: IstB-like 23.9 1.4E+02 0.003 26.2 4.7 46 10-55 47-92 (178)
300 TIGR03457 sulphoacet_xsc sulfo 23.8 5.8E+02 0.013 27.1 10.2 28 343-372 64-97 (579)
301 PF07015 VirC1: VirC1 protein; 23.7 1.8E+02 0.0039 26.9 5.4 42 13-54 4-46 (231)
302 PRK10353 3-methyl-adenine DNA 23.5 91 0.002 27.8 3.3 79 370-451 22-120 (187)
303 PF02016 Peptidase_S66: LD-car 23.5 84 0.0018 30.1 3.4 76 281-375 45-122 (284)
304 TIGR00064 ftsY signal recognit 23.4 1.5E+02 0.0032 28.2 5.1 39 12-50 74-112 (272)
305 cd02032 Bchl_like This family 23.4 1.4E+02 0.003 28.0 4.9 35 12-46 2-36 (267)
306 PF09140 MipZ: ATPase MipZ; I 23.3 1.4E+02 0.003 28.1 4.6 39 12-50 1-41 (261)
307 COG3349 Uncharacterized conser 23.3 80 0.0017 32.6 3.3 31 12-47 2-32 (485)
308 COG2894 MinD Septum formation 23.1 1.4E+02 0.003 27.5 4.4 36 12-47 3-40 (272)
309 PF09334 tRNA-synt_1g: tRNA sy 23.0 72 0.0016 32.2 3.0 29 20-48 15-46 (391)
310 PF05014 Nuc_deoxyrib_tr: Nucl 23.0 3.2E+02 0.0069 21.7 6.3 94 272-377 1-101 (113)
311 TIGR00173 menD 2-succinyl-5-en 22.9 1.5E+02 0.0031 30.3 5.2 27 343-371 63-95 (432)
312 TIGR01470 cysG_Nterm siroheme 22.9 5.6E+02 0.012 23.0 13.9 149 268-437 9-166 (205)
313 PF03796 DnaB_C: DnaB-like hel 22.9 2.3E+02 0.0049 26.4 6.2 43 12-54 21-64 (259)
314 PF04244 DPRP: Deoxyribodipyri 22.9 1.2E+02 0.0026 27.9 4.1 25 23-47 47-71 (224)
315 PF00448 SRP54: SRP54-type pro 22.9 1.4E+02 0.0031 26.7 4.6 39 12-50 3-41 (196)
316 PRK08199 thiamine pyrophosphat 22.8 3.2E+02 0.0069 28.9 8.0 25 347-371 73-103 (557)
317 PRK06849 hypothetical protein; 22.8 1.7E+02 0.0037 29.3 5.6 35 10-48 4-38 (389)
318 PRK07979 acetolactate synthase 22.8 4.7E+02 0.01 27.8 9.3 27 346-372 68-100 (574)
319 cd03784 GT1_Gtf_like This fami 22.7 3.4E+02 0.0074 26.9 7.9 35 271-307 3-37 (401)
320 TIGR01007 eps_fam capsular exo 22.7 1.7E+02 0.0036 26.1 5.1 37 11-47 17-55 (204)
321 PRK04539 ppnK inorganic polyph 22.6 2.4E+02 0.0052 27.2 6.3 55 342-417 67-125 (296)
322 PRK07282 acetolactate synthase 22.5 3.5E+02 0.0075 28.7 8.2 26 347-372 75-106 (566)
323 cd03115 SRP The signal recogni 22.4 2.2E+02 0.0048 24.5 5.7 39 13-51 3-41 (173)
324 COG3140 Uncharacterized protei 22.3 2.7E+02 0.0059 19.2 4.6 37 421-461 12-48 (60)
325 TIGR02201 heptsyl_trn_III lipo 22.3 1.1E+02 0.0023 30.0 4.1 44 12-55 1-46 (344)
326 PRK08939 primosomal protein Dn 22.2 1.4E+02 0.0031 28.9 4.7 47 10-56 156-202 (306)
327 PRK14077 pnk inorganic polypho 22.2 1.7E+02 0.0037 28.1 5.2 57 340-417 61-121 (287)
328 cd01983 Fer4_NifH The Fer4_Nif 22.0 2.1E+02 0.0045 21.1 4.9 33 13-45 2-34 (99)
329 TIGR02195 heptsyl_trn_II lipop 22.0 1.2E+02 0.0027 29.4 4.4 44 12-55 1-46 (334)
330 PF02142 MGS: MGS-like domain 22.0 1.1E+02 0.0023 23.7 3.2 36 27-74 2-37 (95)
331 PF02780 Transketolase_C: Tran 22.0 1.4E+02 0.003 24.3 4.0 35 10-46 9-43 (124)
332 PRK13982 bifunctional SbtC-lik 21.8 81 0.0017 32.6 3.0 20 28-47 286-305 (475)
333 PRK05579 bifunctional phosphop 21.8 1.6E+02 0.0035 29.7 5.2 44 10-54 6-49 (399)
334 COG0162 TyrS Tyrosyl-tRNA synt 21.5 98 0.0021 31.2 3.5 27 20-47 47-73 (401)
335 cd03822 GT1_ecORF704_like This 21.2 1.3E+02 0.0028 28.8 4.4 29 20-48 12-40 (366)
336 TIGR03845 sulfopyru_alph sulfo 21.2 3E+02 0.0065 23.6 6.1 25 348-372 62-91 (157)
337 PF03808 Glyco_tran_WecB: Glyc 21.1 3E+02 0.0066 23.9 6.2 64 198-279 49-112 (172)
338 PF02702 KdpD: Osmosensitive K 21.1 1.7E+02 0.0037 26.5 4.5 38 10-47 5-42 (211)
339 CHL00072 chlL photochlorophyll 21.0 1.8E+02 0.0038 27.9 5.1 36 12-47 2-37 (290)
340 PRK05973 replicative DNA helic 21.0 2.2E+02 0.0049 26.4 5.6 43 12-54 66-108 (237)
341 KOG1387 Glycosyltransferase [C 20.9 8.4E+02 0.018 24.3 9.7 102 325-436 335-446 (465)
342 PLN02939 transferase, transfer 20.9 1.7E+02 0.0037 33.1 5.5 40 9-48 480-525 (977)
343 COG2120 Uncharacterized protei 20.9 2E+02 0.0043 26.7 5.2 36 10-46 10-46 (237)
344 PLN00142 sucrose synthase 20.7 2.1E+02 0.0045 31.9 6.0 16 99-114 422-437 (815)
345 COG2230 Cfa Cyclopropane fatty 20.7 37 0.00081 32.4 0.3 40 352-391 80-121 (283)
346 PRK06027 purU formyltetrahydro 20.6 6.8E+02 0.015 23.9 9.0 114 289-430 156-271 (286)
347 PRK08979 acetolactate synthase 20.4 3.9E+02 0.0084 28.4 8.0 27 346-372 68-100 (572)
348 PRK14075 pnk inorganic polypho 20.3 3.2E+02 0.0069 25.7 6.5 53 344-417 42-95 (256)
349 PF03403 PAF-AH_p_II: Platelet 20.3 86 0.0019 31.5 2.9 38 10-47 99-136 (379)
350 PRK07313 phosphopantothenoylcy 20.3 6E+02 0.013 22.4 8.2 66 348-414 81-178 (182)
351 COG0467 RAD55 RecA-superfamily 20.3 2.2E+02 0.0049 26.5 5.6 45 11-55 24-68 (260)
352 PRK13234 nifH nitrogenase redu 20.2 2E+02 0.0043 27.6 5.3 35 12-46 6-40 (295)
353 cd03412 CbiK_N Anaerobic cobal 20.1 1.7E+02 0.0036 24.2 4.1 37 270-306 2-40 (127)
354 cd00861 ProRS_anticodon_short 20.1 2.1E+02 0.0045 21.5 4.5 34 12-45 3-38 (94)
No 1
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=4.1e-74 Score=579.64 Aligned_cols=416 Identities=36% Similarity=0.658 Sum_probs=332.1
Q ss_pred CCCCCCCCCCcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCCCCCC
Q 012217 1 MESKPKACSKVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGLPAS 80 (468)
Q Consensus 1 m~~~~~~~~~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l~~~~~~~ 80 (468)
||.+. .++||++||||++||++||++||+.|+.||+.|||++|+.+... .. ...++|+|..+|+++|++
T Consensus 1 ~~~~~---~~~HVvlvPfpaqGHi~P~l~LAk~La~~G~~VT~v~T~~n~~~--~~------~~~~~i~~~~ip~glp~~ 69 (451)
T PLN02410 1 MEEKP---ARRRVVLVPVPAQGHISPMMQLAKTLHLKGFSITIAQTKFNYFS--PS------DDFTDFQFVTIPESLPES 69 (451)
T ss_pred CCcCC---CCCEEEEECCCccccHHHHHHHHHHHHcCCCEEEEEeCcccccc--cc------cCCCCeEEEeCCCCCCcc
Confidence 77543 27899999999999999999999999999999999999977521 10 112369999999888763
Q ss_pred CCCCCCc---------------------CC------CC-C---CCcccchHHHHHHHcCCCeEEEccccHHHHHHHhhhh
Q 012217 81 SDESPTA---------------------QD------AY-S---LDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQ 129 (468)
Q Consensus 81 ~~~~~~~---------------------~~------~~-~---~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~ 129 (468)
. .+.. .. -+ . +|++++|+.++|+++|||+++|++++++.++++++++
T Consensus 70 ~--~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~~~~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~~~~~~ 147 (451)
T PLN02410 70 D--FKNLGPIEFLHKLNKECQVSFKDCLGQLVLQQGNEIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFVCRSVFD 147 (451)
T ss_pred c--ccccCHHHHHHHHHHHhHHHHHHHHHHHHhccCCCcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHHHHHHHH
Confidence 1 1110 00 00 1 9999999999999999999999999999998877665
Q ss_pred hhhhhCC-CCccccccccccccccccccccccCCCccCccCccCcccccCCCchhHHHHHHHHHHhcccCcEEEecchhh
Q 012217 130 TFKEKGL-FPVKVLADKSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEATENASKASAIIIHTFDA 208 (468)
Q Consensus 130 ~~~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~ 208 (468)
.+...+. .|.... ... ....+||+++++..+++.+... . .......+... ....+++++++|||++
T Consensus 148 ~~~~~~~~~~~~~~-~~~---------~~~~iPg~~~~~~~dlp~~~~~-~-~~~~~~~~~~~-~~~~~~~~vlvNTf~e 214 (451)
T PLN02410 148 KLYANNVLAPLKEP-KGQ---------QNELVPEFHPLRCKDFPVSHWA-S-LESIMELYRNT-VDKRTASSVIINTASC 214 (451)
T ss_pred HHHhccCCCCcccc-ccC---------ccccCCCCCCCChHHCcchhcC-C-cHHHHHHHHHH-hhcccCCEEEEeChHH
Confidence 4433222 232210 000 2235888888777777754322 1 12222333222 2356788999999999
Q ss_pred ccHHHHHHHhhcCCCceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCcCCCHHHHH
Q 012217 209 LEQQVLNALSFMFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLI 288 (468)
Q Consensus 209 le~p~l~~~~~~~p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~ 288 (468)
||+.++++++...++++++|||++..... +.+.+..+++|.+|||++++++||||||||+..++.+++.
T Consensus 215 LE~~~~~~l~~~~~~~v~~vGpl~~~~~~-----------~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ 283 (451)
T PLN02410 215 LESSSLSRLQQQLQIPVYPIGPLHLVASA-----------PTSLLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVM 283 (451)
T ss_pred hhHHHHHHHHhccCCCEEEecccccccCC-----------CccccccchHHHHHHHhCCCCcEEEEEccccccCCHHHHH
Confidence 99999999987665449999999864211 0112234457999999998899999999999999999999
Q ss_pred HHHHHHHcCCCCEEEEEcCCCCCC--CCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHHHhcCC
Q 012217 289 EVAMGLVNSNHPFLWIIRPDLVTG--ETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGV 366 (468)
Q Consensus 289 ~~~~~l~~~~~~~lw~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~Gv 366 (468)
+++.||+.++++|||+++.+...+ ....+|++|.+|+++|+++++|+||.+||+|+++++|||||||||++||+++||
T Consensus 284 ela~gLe~s~~~FlWv~r~~~~~~~~~~~~lp~~f~er~~~~g~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~Gv 363 (451)
T PLN02410 284 ETASGLDSSNQQFLWVIRPGSVRGSEWIESLPKEFSKIISGRGYIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGV 363 (451)
T ss_pred HHHHHHHhcCCCeEEEEccCcccccchhhcCChhHHHhccCCeEEEccCCHHHHhCCCccCeeeecCchhHHHHHHHcCC
Confidence 999999999999999998532111 123489999999999999999999999999999999999999999999999999
Q ss_pred cEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCCCchHHH
Q 012217 367 PMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLN 446 (468)
Q Consensus 367 P~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~ 446 (468)
|||+||+++||+.||+++++.||+|+.+. +.+++++|+++|+++|.+++|++||+||+++++++++|+++||+|+.+
T Consensus 364 P~l~~P~~~DQ~~na~~~~~~~~~G~~~~---~~~~~~~v~~av~~lm~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~ 440 (451)
T PLN02410 364 PMICKPFSSDQKVNARYLECVWKIGIQVE---GDLDRGAVERAVKRLMVEEEGEEMRKRAISLKEQLRASVISGGSSHNS 440 (451)
T ss_pred CEEeccccccCHHHHHHHHHHhCeeEEeC---CcccHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhcCCCCHHHH
Confidence 99999999999999999977889999997 578999999999999988878899999999999999999999999999
Q ss_pred HHHHHHHHHh
Q 012217 447 LDKLVNEILL 456 (468)
Q Consensus 447 ~~~~~~~~~~ 456 (468)
+++||++++.
T Consensus 441 l~~fv~~~~~ 450 (451)
T PLN02410 441 LEEFVHFMRT 450 (451)
T ss_pred HHHHHHHHHh
Confidence 9999999874
No 2
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=2.4e-73 Score=576.07 Aligned_cols=434 Identities=32% Similarity=0.618 Sum_probs=340.0
Q ss_pred CCCCCCCCCCcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhh---cC-CCCCCCCCeeEEeCCCC
Q 012217 1 MESKPKACSKVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKAR---GQ-HSLDGLPSFRFEAIPDG 76 (468)
Q Consensus 1 m~~~~~~~~~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~---~~-~~~~~~~gi~f~~l~~~ 76 (468)
|+|+ ++++||+++|+|++||++||++||+.|+.+|..|||++|+.+..++.++. .. ........++|..+|++
T Consensus 1 ~~~~---~~~~HVv~~PfpaqGHi~Pml~lA~~La~~G~~vT~v~T~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~pdg 77 (480)
T PLN02555 1 MESE---SSLVHVMLVSFPGQGHVNPLLRLGKLLASKGLLVTFVTTESWGKKMRQANKIQDGVLKPVGDGFIRFEFFEDG 77 (480)
T ss_pred CCCC---CCCCEEEEECCcccccHHHHHHHHHHHHhCCCeEEEEeccchhhhhhccccccccccccCCCCeEEEeeCCCC
Confidence 6663 44899999999999999999999999999999999999998877665321 00 00011224788878888
Q ss_pred CCCCCCCC-CC------c------------C-----CCC--C--CCcccchHHHHHHHcCCCeEEEccccHHHHHHHhhh
Q 012217 77 LPASSDES-PT------A------------Q-----DAY--S--LDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQF 128 (468)
Q Consensus 77 ~~~~~~~~-~~------~------------~-----~~~--~--~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~ 128 (468)
+|++.+.. .. . . .-+ . +|++++|+.++|+++|||+++|++++++.++.++++
T Consensus 78 lp~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a~~~~~~~~~ 157 (480)
T PLN02555 78 WAEDDPRRQDLDLYLPQLELVGKREIPNLVKRYAEQGRPVSCLINNPFIPWVCDVAEELGIPSAVLWVQSCACFSAYYHY 157 (480)
T ss_pred CCCCcccccCHHHHHHHHHHhhhHHHHHHHHHHhccCCCceEEEECCcchHHHHHHHHcCCCeEEeecccHHHHHHHHHH
Confidence 76541000 00 0 0 001 1 999999999999999999999999999999887776
Q ss_pred hhhhhhCCCCccccccccccccccccccccccCCCccCccCccCcccccCCCchhHHHHHHHHHHhcccCcEEEecchhh
Q 012217 129 QTFKEKGLFPVKVLADKSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEATENASKASAIIIHTFDA 208 (468)
Q Consensus 129 ~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~ 208 (468)
+ .+..++....+.. ....+||++.++..+++.++..........+.+.+..+....++++|+|||++
T Consensus 158 ~----~~~~~~~~~~~~~---------~~~~iPglp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~e 224 (480)
T PLN02555 158 Y----HGLVPFPTETEPE---------IDVQLPCMPLLKYDEIPSFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQE 224 (480)
T ss_pred h----hcCCCcccccCCC---------ceeecCCCCCcCHhhCcccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHH
Confidence 4 3333322100000 22358999888888998765432222333444555555667889999999999
Q ss_pred ccHHHHHHHhhcCCCceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCcCCCHHHHH
Q 012217 209 LEQQVLNALSFMFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLI 288 (468)
Q Consensus 209 le~p~l~~~~~~~p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~ 288 (468)
||+.++++++..+ + ++.|||+......... ..+.+.+..+++|.+|||++++++||||||||+..++.+++.
T Consensus 225 LE~~~~~~l~~~~-~-v~~iGPl~~~~~~~~~------~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ 296 (480)
T PLN02555 225 LEKEIIDYMSKLC-P-IKPVGPLFKMAKTPNS------DVKGDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQID 296 (480)
T ss_pred HhHHHHHHHhhCC-C-EEEeCcccCccccccc------cccccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHHH
Confidence 9999999987755 4 9999999753211000 001122345568999999998899999999999999999999
Q ss_pred HHHHHHHcCCCCEEEEEcCCCCC--CCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHHHhcCC
Q 012217 289 EVAMGLVNSNHPFLWIIRPDLVT--GETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGV 366 (468)
Q Consensus 289 ~~~~~l~~~~~~~lw~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~Gv 366 (468)
+++.+|+.++++|||+++..... .....+|+++.+++++|+++++|+||.+||.|+++++|||||||||++||+++||
T Consensus 297 ela~~l~~~~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GV 376 (480)
T PLN02555 297 EIAYGVLNSGVSFLWVMRPPHKDSGVEPHVLPEEFLEKAGDKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGV 376 (480)
T ss_pred HHHHHHHhcCCeEEEEEecCcccccchhhcCChhhhhhcCCceEEEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCC
Confidence 99999999999999999843111 1123588899888899999999999999999999999999999999999999999
Q ss_pred cEEecCCCCCcccchhhheeeceeEEEEeC---CCCCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCCCch
Q 012217 367 PMICWPFTGDQPTNGRYVCNEWGVGMEING---DDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSS 443 (468)
Q Consensus 367 P~v~~P~~~DQ~~na~~~~~~~g~g~~~~~---~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg~s 443 (468)
|||+||+++||+.||++++++||+|+.+.. ..+.++.++|+++|+++|++++|+++|+||++|++++++|+++||||
T Consensus 377 P~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~~~v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~egGSS 456 (480)
T PLN02555 377 PVVCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAENKLITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSS 456 (480)
T ss_pred CEEeCCCccccHHHHHHHHHHhCceEEccCCccccCcCcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcH
Confidence 999999999999999999888999999942 12468999999999999988889999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcC
Q 012217 444 SLNLDKLVNEILLSN 458 (468)
Q Consensus 444 ~~~~~~~~~~~~~~~ 458 (468)
+.++++||+++.+..
T Consensus 457 ~~~l~~~v~~i~~~~ 471 (480)
T PLN02555 457 DRNFQEFVDKLVRKS 471 (480)
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999998773
No 3
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=8.7e-72 Score=560.25 Aligned_cols=405 Identities=32% Similarity=0.570 Sum_probs=322.5
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCCCCCCCCCCCCcCC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGLPASSDESPTAQD 89 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l~~~~~~~~~~~~~~~~ 89 (468)
++||++||||++||++||++||+.|+.+|+.|||++|+.+..++... ..++|+|+.+++++|++. .+....
T Consensus 5 ~~hvv~~P~paqGHi~P~l~lAk~La~~G~~vT~v~t~~~~~~~~~~-------~~~~i~~~~ipdglp~~~--~~~~~~ 75 (449)
T PLN02173 5 RGHVLAVPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTFIFNTIHLD-------PSSPISIATISDGYDQGG--FSSAGS 75 (449)
T ss_pred CcEEEEecCcccccHHHHHHHHHHHHcCCCEEEEEECCchhhhcccC-------CCCCEEEEEcCCCCCCcc--cccccC
Confidence 67999999999999999999999999999999999999876654321 113699999999888631 111100
Q ss_pred C---------------------------C-C---CCcccchHHHHHHHcCCCeEEEccccHHHHHHHhhhhhhhhhCCCC
Q 012217 90 A---------------------------Y-S---LDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEKGLFP 138 (468)
Q Consensus 90 ~---------------------------~-~---~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~g~~p 138 (468)
. + . +|+|++|+.++|+++|||++.|++++++.++.+++.. + ..+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~~~~-~-~~~~-- 151 (449)
T PLN02173 76 VPEYLQNFKTFGSKTVADIIRKHQSTDNPITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYINYLSY-I-NNGS-- 151 (449)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHhhccCCCceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHHHHhHH-h-ccCC--
Confidence 0 0 0 8999999999999999999999999888876654321 1 1110
Q ss_pred ccccccccccccccccccccccCCCccCccCccCcccccCCCchhHHHHHHHHHHhcccCcEEEecchhhccHHHHHHHh
Q 012217 139 VKVLADKSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEATENASKASAIIIHTFDALEQQVLNALS 218 (468)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~p~l~~~~ 218 (468)
....+||++.++..+++.++............+.+..+...+++++++|||++||+.++++++
T Consensus 152 -----------------~~~~~pg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~ 214 (449)
T PLN02173 152 -----------------LTLPIKDLPLLELQDLPTFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLS 214 (449)
T ss_pred -----------------ccCCCCCCCCCChhhCChhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHHHHHHHH
Confidence 112378888888888887665322223334444455566778899999999999999999997
Q ss_pred hcCCCceeeecccccccc--ccccccccccccCCCcc--chhhhhhhccccCCCCceEEEeecCCcCCCHHHHHHHHHHH
Q 012217 219 FMFPHHLFTIGPLQLLLN--QTEEQDGMLNSIGYNLL--KEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIEVAMGL 294 (468)
Q Consensus 219 ~~~p~~v~~VGpl~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l 294 (468)
.. ++ ++.|||+++... ..... . .....+.| ..+++|.+|||++++++||||||||+..++.+++.+++.+|
T Consensus 215 ~~-~~-v~~VGPl~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gL 289 (449)
T PLN02173 215 KV-CP-VLTIGPTVPSMYLDQQIKS--D-NDYDLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAI 289 (449)
T ss_pred hc-CC-eeEEcccCchhhccccccc--c-ccccccccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHh
Confidence 64 45 999999975311 00000 0 00011223 23456999999999999999999999999999999999999
Q ss_pred HcCCCCEEEEEcCCCCCCCCCCCchhHHHHh-hcCceEecccChHHhhcCCCcceeeeccChhhHHHHHhcCCcEEecCC
Q 012217 295 VNSNHPFLWIIRPDLVTGETADLPAEFEVKA-KEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPF 373 (468)
Q Consensus 295 ~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~ 373 (468)
++.+|+|+++.+ ..+.+|+++.++. ++|+++++|+||.+||+|++||+|||||||||++||+++|||||+||+
T Consensus 290 --s~~~flWvvr~~----~~~~lp~~~~~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P~ 363 (449)
T PLN02173 290 --SNFSYLWVVRAS----EESKLPPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMPQ 363 (449)
T ss_pred --cCCCEEEEEecc----chhcccchHHHhhcCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecCc
Confidence 788999999853 2234788888887 578999999999999999999999999999999999999999999999
Q ss_pred CCCcccchhhheeeceeEEEEeCCC--CCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHH
Q 012217 374 TGDQPTNGRYVCNEWGVGMEINGDD--EDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLV 451 (468)
Q Consensus 374 ~~DQ~~na~~~~~~~g~g~~~~~~~--~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~ 451 (468)
++||+.||+++++.||+|+.+..++ +.++.++|+++|+++|.+++|+++|+||+++++++++|+++||+|+.++++|+
T Consensus 364 ~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~~~~~e~v~~av~~vm~~~~~~~~r~~a~~~~~~a~~Av~~gGSS~~~l~~~v 443 (449)
T PLN02173 364 WTDQPMNAKYIQDVWKVGVRVKAEKESGIAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGGSTDININTFV 443 (449)
T ss_pred hhcchHHHHHHHHHhCceEEEeecccCCcccHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence 9999999999988889999986421 34799999999999999888899999999999999999999999999999999
Q ss_pred HHHH
Q 012217 452 NEIL 455 (468)
Q Consensus 452 ~~~~ 455 (468)
+++.
T Consensus 444 ~~~~ 447 (449)
T PLN02173 444 SKIQ 447 (449)
T ss_pred HHhc
Confidence 9985
No 4
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=1.1e-70 Score=558.40 Aligned_cols=432 Identities=26% Similarity=0.438 Sum_probs=328.5
Q ss_pred CCCCCCCCCCcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCC----CC
Q 012217 1 MESKPKACSKVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIP----DG 76 (468)
Q Consensus 1 m~~~~~~~~~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l~----~~ 76 (468)
|-+-.+.. ++||+++|||++||++||++||+.|+.+|+.|||++|+.+..++.+... ..++|+++.++ ++
T Consensus 1 ~~~~~~~~-~~HVvl~PfpaqGHi~P~l~LAk~La~~G~~VTfv~T~~n~~~~~~~~~-----~~~~i~~~~lp~P~~~~ 74 (477)
T PLN02863 1 MTELNKPA-GTHVLVFPFPAQGHMIPLLDLTHRLALRGLTITVLVTPKNLPFLNPLLS-----KHPSIETLVLPFPSHPS 74 (477)
T ss_pred CcccccCC-CCEEEEecCcccchHHHHHHHHHHHHhCCCEEEEEeCCCcHHHHhhhcc-----cCCCeeEEeCCCCCcCC
Confidence 44433333 8999999999999999999999999999999999999999887765421 12357776643 24
Q ss_pred CCCCCCCCCCcCCCC-----------------------------C---CCcccchHHHHHHHcCCCeEEEccccHHHHHH
Q 012217 77 LPASSDESPTAQDAY-----------------------------S---LDGFLPFTITAAQQLGLPIVLFFTISACSFMG 124 (468)
Q Consensus 77 ~~~~~~~~~~~~~~~-----------------------------~---~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~ 124 (468)
+|++. +...++. . +|++++|+.++|+++|||+++||+++++.++.
T Consensus 75 lPdG~---~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~sA~~~~~ 151 (477)
T PLN02863 75 IPSGV---ENVKDLPPSGFPLMIHALGELYAPLLSWFRSHPSPPVAIISDMFLGWTQNLACQLGIRRFVFSPSGAMALSI 151 (477)
T ss_pred CCCCC---cChhhcchhhHHHHHHHHHHhHHHHHHHHHhCCCCCeEEEEcCchHhHHHHHHHcCCCEEEEeccCHHHHHH
Confidence 44441 1111110 0 89999999999999999999999999999999
Q ss_pred HhhhhhhhhhCCCCccc-cccccccccccccccccccCCCccCccCccCcccccCCCchhHHHHHHHHHHhcccCcEEEe
Q 012217 125 FKQFQTFKEKGLFPVKV-LADKSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEATENASKASAIII 203 (468)
Q Consensus 125 ~~~~~~~~~~g~~p~~~-~~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 203 (468)
+++++.. .+... ..+.. . .. ....+||++.++..+++.+++...........+.+.......++++++
T Consensus 152 ~~~~~~~-----~~~~~~~~~~~---~-~~--~~~~iPg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlv 220 (477)
T PLN02863 152 MYSLWRE-----MPTKINPDDQN---E-IL--SFSKIPNCPKYPWWQISSLYRSYVEGDPAWEFIKDSFRANIASWGLVV 220 (477)
T ss_pred HHHHhhc-----ccccccccccc---c-cc--ccCCCCCCCCcChHhCchhhhccCccchHHHHHHHHHhhhccCCEEEE
Confidence 8876531 11110 00000 0 00 123578988888888887665322222333444444444567788999
Q ss_pred cchhhccHHHHHHHhhcC--CCceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCcC
Q 012217 204 HTFDALEQQVLNALSFMF--PHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIF 281 (468)
Q Consensus 204 nt~~~le~p~l~~~~~~~--p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~~ 281 (468)
|||++||+.++++++..+ ++ ++.|||+.+........ ...+.+.+..+++|.+|||++++++||||||||+..
T Consensus 221 NTf~eLE~~~~~~~~~~~~~~~-v~~IGPL~~~~~~~~~~----~~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~ 295 (477)
T PLN02863 221 NSFTELEGIYLEHLKKELGHDR-VWAVGPILPLSGEKSGL----MERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVV 295 (477)
T ss_pred ecHHHHHHHHHHHHHhhcCCCC-eEEeCCCcccccccccc----cccCCcccccHHHHHHHHhcCCCCceEEEEeeceec
Confidence 999999999999998865 45 99999997532100000 000111111346799999999889999999999999
Q ss_pred CCHHHHHHHHHHHHcCCCCEEEEEcCCCCC-CCCCCCchhHHHHhhcCceE-ecccChHHhhcCCCcceeeeccChhhHH
Q 012217 282 MNKQQLIEVAMGLVNSNHPFLWIIRPDLVT-GETADLPAEFEVKAKEKGFV-ASWCPQEEVLKHPSIGGFLTHCGWNSIV 359 (468)
Q Consensus 282 ~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~-~~~~~~~~~~~~~~~~~~~v-~~~~p~~~il~~~~~~~~v~hgG~~s~~ 359 (468)
.+.+++.+++.+|+++|++|||+++..... .....+|+++.+++.+++++ .+|+||.+||+|+++++|||||||||++
T Consensus 296 ~~~~~~~ela~gL~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~G~nS~~ 375 (477)
T PLN02863 296 LTKEQMEALASGLEKSGVHFIWCVKEPVNEESDYSNIPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHCGWNSVL 375 (477)
T ss_pred CCHHHHHHHHHHHHhCCCcEEEEECCCcccccchhhCCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeEEecCCchHHH
Confidence 999999999999999999999999853211 11235888998887665555 4899999999999999999999999999
Q ss_pred HHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCC-CCCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhC
Q 012217 360 ESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGD-DEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAA 438 (468)
Q Consensus 360 eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~-~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~ 438 (468)
||+++|||+|+||+++||+.||++++++||+|+++... ...++.++++++|+++|. ++++||+||+++++++++|++
T Consensus 376 Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~~~~~~~v~~~v~~~m~--~~~~~r~~a~~l~e~a~~Av~ 453 (477)
T PLN02863 376 EGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADTVPDSDELARVFMESVS--ENQVERERAKELRRAALDAIK 453 (477)
T ss_pred HHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCCCcCHHHHHHHHHHHhh--ccHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999987889999999531 135689999999999994 234999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHhcCC
Q 012217 439 PHGSSSLNLDKLVNEILLSNK 459 (468)
Q Consensus 439 ~gg~s~~~~~~~~~~~~~~~~ 459 (468)
+||+|+.++++||+++++...
T Consensus 454 ~gGSS~~~l~~~v~~i~~~~~ 474 (477)
T PLN02863 454 ERGSSVKDLDGFVKHVVELGL 474 (477)
T ss_pred cCCcHHHHHHHHHHHHHHhcc
Confidence 999999999999999987653
No 5
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=4.6e-71 Score=557.97 Aligned_cols=411 Identities=27% Similarity=0.470 Sum_probs=324.9
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHH-hCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCC----CCCCCCCCC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLH-HKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPD----GLPASSDES 84 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~-~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l~~----~~~~~~~~~ 84 (468)
++||+++|||++||++||++||+.|+ ++|++|||++|+.+..++.+... ..++|+++.+|+ +++... .
T Consensus 5 ~pHVvl~P~paqGHi~P~l~LAk~La~~~g~~vT~v~t~~n~~~~~~~~~-----~~~~i~~~~lp~p~~~glp~~~--~ 77 (481)
T PLN02992 5 KPHAAMFSSPGMGHVIPVIELGKRLSANHGFHVTVFVLETDAASAQSKFL-----NSTGVDIVGLPSPDISGLVDPS--A 77 (481)
T ss_pred CcEEEEeCCcccchHHHHHHHHHHHHhCCCcEEEEEeCCCchhhhhhccc-----cCCCceEEECCCccccCCCCCC--c
Confidence 68999999999999999999999998 78999999999988766533211 112688888874 443110 1
Q ss_pred CCc------------------CCC--C-C---CCcccchHHHHHHHcCCCeEEEccccHHHHHHHhhhhhhhhhCCCCcc
Q 012217 85 PTA------------------QDA--Y-S---LDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEKGLFPVK 140 (468)
Q Consensus 85 ~~~------------------~~~--~-~---~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~g~~p~~ 140 (468)
... ..+ + . +|++++|+.++|+++|||+++|++++++.++.+.+++.+... ....
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~l~~~~~~p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~--~~~~ 155 (481)
T PLN02992 78 HVVTKIGVIMREAVPTLRSKIAEMHQKPTALIVDLFGTDALCLGGEFNMLTYIFIASNARFLGVSIYYPTLDKD--IKEE 155 (481)
T ss_pred cHHHHHHHHHHHhHHHHHHHHHhcCCCCeEEEECCcchhHHHHHHHcCCCEEEEecCcHHHHHHHHhhhhhccc--cccc
Confidence 000 000 0 1 999999999999999999999999999888877666532111 0000
Q ss_pred ccccccccccccccccccccCCCccCccCccCcccccCCCchhHHHHHHHHHHhcccCcEEEecchhhccHHHHHHHhhc
Q 012217 141 VLADKSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEATENASKASAIIIHTFDALEQQVLNALSFM 220 (468)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~p~l~~~~~~ 220 (468)
.. ..+ ....+||++.++..+++..+... .......+.+......+++++|+|||++||+.++++++..
T Consensus 156 ---~~------~~~-~~~~iPg~~~l~~~dlp~~~~~~--~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~l~~l~~~ 223 (481)
T PLN02992 156 ---HT------VQR-KPLAMPGCEPVRFEDTLDAYLVP--DEPVYRDFVRHGLAYPKADGILVNTWEEMEPKSLKSLQDP 223 (481)
T ss_pred ---cc------cCC-CCcccCCCCccCHHHhhHhhcCC--CcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHhhc
Confidence 00 000 23458999888888887543321 2233444455556677889999999999999999998752
Q ss_pred --C-----CCceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCcCCCHHHHHHHHHH
Q 012217 221 --F-----PHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIEVAMG 293 (468)
Q Consensus 221 --~-----p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~ 293 (468)
+ ++ ++.|||+...... . .++++|.+|||++++++||||||||+..++.+++.+++.+
T Consensus 224 ~~~~~~~~~~-v~~VGPl~~~~~~-------------~--~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~g 287 (481)
T PLN02992 224 KLLGRVARVP-VYPIGPLCRPIQS-------------S--KTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWG 287 (481)
T ss_pred cccccccCCc-eEEecCccCCcCC-------------C--cchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHH
Confidence 1 34 9999999753110 0 1345799999999889999999999999999999999999
Q ss_pred HHcCCCCEEEEEcCCCCC---------------C-CCCCCchhHHHHhhcCceEe-cccChHHhhcCCCcceeeeccChh
Q 012217 294 LVNSNHPFLWIIRPDLVT---------------G-ETADLPAEFEVKAKEKGFVA-SWCPQEEVLKHPSIGGFLTHCGWN 356 (468)
Q Consensus 294 l~~~~~~~lw~~~~~~~~---------------~-~~~~~~~~~~~~~~~~~~v~-~~~p~~~il~~~~~~~~v~hgG~~ 356 (468)
|+.++++|||+++..... . ..+.+|++|.+|+.++++++ +|+||.+||+|+++|+||||||||
T Consensus 288 L~~s~~~flW~~r~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~~iL~h~~vg~FitH~G~n 367 (481)
T PLN02992 288 LEMSQQRFVWVVRPPVDGSACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQAEILAHQAVGGFLTHCGWS 367 (481)
T ss_pred HHHcCCCEEEEEeCCcccccccccccCcccccccchhhhCCHHHHHHhcCCCEEEeecCCHHHHhCCcccCeeEecCchh
Confidence 999999999999753110 0 02358899999998888766 799999999999999999999999
Q ss_pred hHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Q 012217 357 SIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEA 436 (468)
Q Consensus 357 s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a 436 (468)
|++||+++|||||+||+++||+.||+++++++|+|+.+...++.++.++|+++|+++|.+++|++||++|+++++++++|
T Consensus 368 S~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~l~~av~~vm~~~~g~~~r~~a~~~~~~a~~A 447 (481)
T PLN02992 368 STLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPKEVISRSKIEALVRKVMVEEEGEEMRRKVKKLRDTAEMS 447 (481)
T ss_pred HHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCCCcccHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999997789999999742246899999999999998888889999999999999999
Q ss_pred h--CCCCchHHHHHHHHHHHHhc
Q 012217 437 A--APHGSSSLNLDKLVNEILLS 457 (468)
Q Consensus 437 ~--~~gg~s~~~~~~~~~~~~~~ 457 (468)
+ ++||||+.++++|++++++-
T Consensus 448 v~~~~GGSS~~~l~~~v~~~~~~ 470 (481)
T PLN02992 448 LSIDGGGVAHESLCRVTKECQRF 470 (481)
T ss_pred hcCCCCCchHHHHHHHHHHHHHH
Confidence 9 46999999999999999874
No 6
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=2.2e-70 Score=555.15 Aligned_cols=424 Identities=32% Similarity=0.574 Sum_probs=321.4
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCC-----CCCCCCCCCC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIP-----DGLPASSDES 84 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l~-----~~~~~~~~~~ 84 (468)
++||+++|||++||++||++||+.|+.||+.|||++|+.+..++..........+. .|+|+.+| +++|++.
T Consensus 8 ~~Hvv~vPfpaqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~~~~~~~-~i~~~~lp~p~~~dglp~~~--- 83 (491)
T PLN02534 8 QLHFVLIPLMAQGHMIPMIDMARLLAERGVIVSLVTTPQNASRFAKTIDRARESGL-PIRLVQIPFPCKEVGLPIGC--- 83 (491)
T ss_pred CCEEEEECCCCcchHHHHHHHHHHHHhCCCeEEEEECCCcHHHHhhhhhhccccCC-CeEEEEcCCCCccCCCCCCc---
Confidence 67999999999999999999999999999999999999988776654321111111 38999987 6777652
Q ss_pred CCcCCCC------------------------------C---CCcccchHHHHHHHcCCCeEEEccccHHHHHHHhhhhhh
Q 012217 85 PTAQDAY------------------------------S---LDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTF 131 (468)
Q Consensus 85 ~~~~~~~------------------------------~---~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~ 131 (468)
+...+++ . +|++++|+.++|+++|||+++|++++++.++.++++...
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~lL~~~~~pp~cIV~D~f~~Wa~dVA~~lgIP~v~F~t~~a~~~~~~~~~~~~ 163 (491)
T PLN02534 84 ENLDTLPSRDLLRKFYDAVDKLQQPLERFLEQAKPPPSCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSSHNIRLH 163 (491)
T ss_pred cccccCCcHHHHHHHHHHHHHhHHHHHHHHHhcCCCCcEEEECCccHHHHHHHHHhCCCeEEEecchHHHHHHHHHHHHh
Confidence 2111110 0 899999999999999999999999999888765544321
Q ss_pred hhhCCCCccccccccccccccccccccccCCCcc---CccCccCcccccCCCchhHHHHHHHHHHhcccCcEEEecchhh
Q 012217 132 KEKGLFPVKVLADKSCLTKEYLNSLIDWIPGMKD---IRIRDLPSFIQSTDPKDMMFNLCVEATENASKASAIIIHTFDA 208 (468)
Q Consensus 132 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~pg~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~ 208 (468)
. +..+.. ... ....+||++. ++..+++.++.... ....+.....+....++++++|||++
T Consensus 164 ~--~~~~~~---~~~---------~~~~iPg~p~~~~l~~~dlp~~~~~~~---~~~~~~~~~~~~~~~a~~vlvNTf~e 226 (491)
T PLN02534 164 N--AHLSVS---SDS---------EPFVVPGMPQSIEITRAQLPGAFVSLP---DLDDVRNKMREAESTAFGVVVNSFNE 226 (491)
T ss_pred c--ccccCC---CCC---------ceeecCCCCccccccHHHCChhhcCcc---cHHHHHHHHHhhcccCCEEEEecHHH
Confidence 1 111111 100 2345788764 56667775443211 11122222222334577999999999
Q ss_pred ccHHHHHHHhhcCCCceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCcCCCHHHHH
Q 012217 209 LEQQVLNALSFMFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLI 288 (468)
Q Consensus 209 le~p~l~~~~~~~p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~ 288 (468)
||+.++++++..+++.++.|||+........+. ...+.....++++|++|||++++++||||||||+..+..+++.
T Consensus 227 LE~~~l~~l~~~~~~~v~~VGPL~~~~~~~~~~----~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~ 302 (491)
T PLN02534 227 LEHGCAEAYEKAIKKKVWCVGPVSLCNKRNLDK----FERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLI 302 (491)
T ss_pred hhHHHHHHHHhhcCCcEEEECcccccccccccc----cccCCccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHH
Confidence 999999999887644499999997532110000 0000000112357999999998899999999999999999999
Q ss_pred HHHHHHHcCCCCEEEEEcCCCCC-C-CCCCCchhHHHHhhcCceE-ecccChHHhhcCCCcceeeeccChhhHHHHHhcC
Q 012217 289 EVAMGLVNSNHPFLWIIRPDLVT-G-ETADLPAEFEVKAKEKGFV-ASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSG 365 (468)
Q Consensus 289 ~~~~~l~~~~~~~lw~~~~~~~~-~-~~~~~~~~~~~~~~~~~~v-~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~G 365 (468)
+++.+|+.++++|||+++.+... . ....+|++|.+++.+++++ .+|+||..||+|++++||||||||||++||+++|
T Consensus 303 e~a~gl~~~~~~flW~~r~~~~~~~~~~~~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~G 382 (491)
T PLN02534 303 ELGLGLEASKKPFIWVIKTGEKHSELEEWLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTIEGICSG 382 (491)
T ss_pred HHHHHHHhCCCCEEEEEecCccccchhhhcCchhhHHhhccCCeeccCCCCHHHHhcCCccceEEecCccHHHHHHHHcC
Confidence 99999999999999999853111 1 1124678998886555554 5899999999999999999999999999999999
Q ss_pred CcEEecCCCCCcccchhhheeeceeEEEEeC-------CC---C-CcchhHHHHHHHHHhc--CchHHHHHHHHHHHHHH
Q 012217 366 VPMICWPFTGDQPTNGRYVCNEWGVGMEING-------DD---E-DVIRNEVEKLVREMME--GEKGKQMRNKAMEWKGL 432 (468)
Q Consensus 366 vP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~-------~~---~-~~~~~~l~~av~~~l~--~~~~~~~~~~a~~l~~~ 432 (468)
||+|+||+++||+.||++++++||+|+++.. ++ + .+++++|+++|+++|. +++|+++|+||++|+++
T Consensus 383 vP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~elk~~ 462 (491)
T PLN02534 383 VPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQELGVM 462 (491)
T ss_pred CCEEeccccccHHHHHHHHHHhhcceEEecccccccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998841 01 1 4899999999999997 46788999999999999
Q ss_pred HHHHhCCCCchHHHHHHHHHHHHhcC
Q 012217 433 AEEAAAPHGSSSLNLDKLVNEILLSN 458 (468)
Q Consensus 433 ~~~a~~~gg~s~~~~~~~~~~~~~~~ 458 (468)
+++|+.+||||+.++++||+++.+..
T Consensus 463 a~~Av~~GGSS~~nl~~fv~~i~~~~ 488 (491)
T PLN02534 463 ARKAMELGGSSHINLSILIQDVLKQQ 488 (491)
T ss_pred HHHHhcCCCcHHHHHHHHHHHHHHHh
Confidence 99999999999999999999998654
No 7
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=1.2e-70 Score=556.05 Aligned_cols=412 Identities=27% Similarity=0.504 Sum_probs=324.6
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCCCCCCCC-CC-C--
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGLPASSD-ES-P-- 85 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l~~~~~~~~~-~~-~-- 85 (468)
++||+++|||++||++||++||+.|+++|++|||+|++.+..++.+... ..++|+|+.+|++++++.. +. .
T Consensus 6 ~~HVVlvPfPaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~~~~~~~-----~~~~i~~v~lp~g~~~~~~~~~~~l~ 80 (448)
T PLN02562 6 RPKIILVPYPAQGHVTPMLKLASAFLSRGFEPVVITPEFIHRRISATLD-----PKLGITFMSISDGQDDDPPRDFFSIE 80 (448)
T ss_pred CcEEEEEcCccccCHHHHHHHHHHHHhCCCEEEEEeCcchhhhhhhccC-----CCCCEEEEECCCCCCCCccccHHHHH
Confidence 7899999999999999999999999999999999999998876655421 1137999999987653210 00 0
Q ss_pred -C------------cCCC----C--C--CCcccchHHHHHHHcCCCeEEEccccHHHHHHHhhhhhhhhhCCCCcccccc
Q 012217 86 -T------------AQDA----Y--S--LDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEKGLFPVKVLAD 144 (468)
Q Consensus 86 -~------------~~~~----~--~--~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~ 144 (468)
. ...+ + . +|++++|+.++|+++|||+++|++++++.++.+++++.+...+..+.. .
T Consensus 81 ~a~~~~~~~~l~~ll~~l~~~~pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~---~ 157 (448)
T PLN02562 81 NSMENTMPPQLERLLHKLDEDGEVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAAYRLIQAIPELVRTGLISET---G 157 (448)
T ss_pred HHHHHhchHHHHHHHHHhcCCCCcEEEEECCccHhHHHHHHHhCCCEEEEechhHHHHHHHHHHHHHhhccccccc---c
Confidence 0 0000 0 1 899999999999999999999999999888887776654333322211 0
Q ss_pred ccccccccccccccccCCCccCccCccCcccccCCCchhHHHHHHHHHHhcccCcEEEecchhhccHHHHHHHhh-----
Q 012217 145 KSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEATENASKASAIIIHTFDALEQQVLNALSF----- 219 (468)
Q Consensus 145 ~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~p~l~~~~~----- 219 (468)
.. ........+||++.++..+++.++............+.+..+...+++++++|||.+||+.+++..+.
T Consensus 158 ~~-----~~~~~~~~~Pg~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~ 232 (448)
T PLN02562 158 CP-----RQLEKICVLPEQPLLSTEDLPWLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASYNNG 232 (448)
T ss_pred cc-----ccccccccCCCCCCCChhhCcchhcCCCcchHHHHHHHHHHhccccCCEEEEcChhhhCHHHHHHHHhhhccc
Confidence 00 00002235889888888888876543221223344455555667778899999999999998887653
Q ss_pred cCCCceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCc-CCCHHHHHHHHHHHHcCC
Q 012217 220 MFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFI-FMNKQQLIEVAMGLVNSN 298 (468)
Q Consensus 220 ~~p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~-~~~~~~~~~~~~~l~~~~ 298 (468)
..|+ ++.|||++....... .+.+.+..+.+|.+|||++++++||||||||+. .++.+++.+++.+|+++|
T Consensus 233 ~~~~-v~~iGpl~~~~~~~~--------~~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g 303 (448)
T PLN02562 233 QNPQ-ILQIGPLHNQEATTI--------TKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASG 303 (448)
T ss_pred cCCC-EEEecCccccccccc--------CCCccccchHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCC
Confidence 2455 999999986421100 001113345679999999988999999999986 678999999999999999
Q ss_pred CCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCCCcc
Q 012217 299 HPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQP 378 (468)
Q Consensus 299 ~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~ 378 (468)
++|||+++.+ ..+.+|+++.++.++|+++++|+||.+||+|+++|+|||||||||++||+++|||+|+||+++||+
T Consensus 304 ~~fiW~~~~~----~~~~l~~~~~~~~~~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P~~~DQ~ 379 (448)
T PLN02562 304 RPFIWVLNPV----WREGLPPGYVERVSKQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYPVAGDQF 379 (448)
T ss_pred CCEEEEEcCC----chhhCCHHHHHHhccCEEEEecCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCCcccchH
Confidence 9999999753 123488899999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHH
Q 012217 379 TNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEIL 455 (468)
Q Consensus 379 ~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~~~~~ 455 (468)
.||+++++++|+|+.+. .++.++|+++|+++|+|+ +||+||++++++++++ ++||||++++++||++++
T Consensus 380 ~na~~~~~~~g~g~~~~----~~~~~~l~~~v~~~l~~~---~~r~~a~~l~~~~~~~-~~gGSS~~nl~~~v~~~~ 448 (448)
T PLN02562 380 VNCAYIVDVWKIGVRIS----GFGQKEVEEGLRKVMEDS---GMGERLMKLRERAMGE-EARLRSMMNFTTLKDELK 448 (448)
T ss_pred HHHHHHHHHhCceeEeC----CCCHHHHHHHHHHHhCCH---HHHHHHHHHHHHHHhc-CCCCCHHHHHHHHHHHhC
Confidence 99999976789998885 479999999999999887 8999999999999887 678999999999999874
No 8
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=2e-70 Score=552.32 Aligned_cols=421 Identities=26% Similarity=0.444 Sum_probs=325.0
Q ss_pred CCcEEEEEcCCCCccHHHHHHHHHHHHhCC--CEEEEEeCCcch-HHHHhhhcCCCCCCCCCeeEEeCCCCC--CC--CC
Q 012217 9 SKVHAVCIPSPFQSHIKAMLKLAKLLHHKG--FHITFVNTEFNH-RRLLKARGQHSLDGLPSFRFEAIPDGL--PA--SS 81 (468)
Q Consensus 9 ~~~~il~~p~p~~GHi~P~l~La~~L~~rG--h~Vt~~t~~~~~-~~~~~~~~~~~~~~~~gi~f~~l~~~~--~~--~~ 81 (468)
+++||+++|+|++||++||++||+.|+.+| ..|||++++.+. ..+.+..... ....++|+|+.+|+.. ++ ..
T Consensus 2 ~~~hvv~~P~p~qGHi~P~l~lA~~La~~gg~~~vT~~~t~~~~~~~~~~~~~~~-~~~~~~i~~~~lp~~~~~~~~~~~ 80 (468)
T PLN02207 2 RNAELIFIPTPTVGHLVPFLEFARRLIEQDDRIRITILLMKLQGQSHLDTYVKSI-ASSQPFVRFIDVPELEEKPTLGGT 80 (468)
T ss_pred CCcEEEEeCCcchhhHHHHHHHHHHHHhCCCCeEEEEEEcCCCcchhhHHhhhhc-cCCCCCeEEEEeCCCCCCCccccc
Confidence 367999999999999999999999999998 999999998765 3333221110 0112369999998532 11 00
Q ss_pred CCCC---------C-----------cCC-----CC--C--CCcccchHHHHHHHcCCCeEEEccccHHHHHHHhhhhhhh
Q 012217 82 DESP---------T-----------AQD-----AY--S--LDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFK 132 (468)
Q Consensus 82 ~~~~---------~-----------~~~-----~~--~--~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~ 132 (468)
.+.. . ... -+ . +|++++|+.++|+++|||+++|++++++.++.+.+++...
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~~a~~~~~~~~~~~~~ 160 (468)
T PLN02207 81 QSVEAYVYDVIEKNIPLVRNIVMDILSSLALDGVKVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQYLADRH 160 (468)
T ss_pred cCHHHHHHHHHHhcchhHHHHHHHHHHHhccCCCCeEEEEECCcchHHHHHHHHhCCCEEEEECccHHHHHHHHHhhhcc
Confidence 0000 0 000 01 1 8999999999999999999999999999888877765321
Q ss_pred hhC-CCCccccccccccccccccccccccCCC-ccCccCccCcccccCCCchhHHHHHHHHHHhcccCcEEEecchhhcc
Q 012217 133 EKG-LFPVKVLADKSCLTKEYLNSLIDWIPGM-KDIRIRDLPSFIQSTDPKDMMFNLCVEATENASKASAIIIHTFDALE 210 (468)
Q Consensus 133 ~~g-~~p~~~~~~~~~~~~~~~~~~~~~~pg~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le 210 (468)
... ..+.. .. + ....+||+ ++++..+++.++.... . ...+.+......+++++|+||+++||
T Consensus 161 ~~~~~~~~~---~~--------~-~~~~vPgl~~~l~~~dlp~~~~~~~---~-~~~~~~~~~~~~~~~~vlvNtf~~LE 224 (468)
T PLN02207 161 SKDTSVFVR---NS--------E-EMLSIPGFVNPVPANVLPSALFVED---G-YDAYVKLAILFTKANGILVNSSFDIE 224 (468)
T ss_pred ccccccCcC---CC--------C-CeEECCCCCCCCChHHCcchhcCCc---c-HHHHHHHHHhcccCCEEEEEchHHHh
Confidence 100 00000 00 1 23468998 5788888887654221 1 23334444567789999999999999
Q ss_pred HHHHHHHhh--cCCCceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCcCCCHHHHH
Q 012217 211 QQVLNALSF--MFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLI 288 (468)
Q Consensus 211 ~p~l~~~~~--~~p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~ 288 (468)
+++++.++. ..|+ ++.|||++..... +.+......+++|.+|||++++++||||||||+..++.+++.
T Consensus 225 ~~~~~~~~~~~~~p~-v~~VGPl~~~~~~---------~~~~~~~~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ 294 (468)
T PLN02207 225 PYSVNHFLDEQNYPS-VYAVGPIFDLKAQ---------PHPEQDLARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVK 294 (468)
T ss_pred HHHHHHHHhccCCCc-EEEecCCcccccC---------CCCccccchhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHH
Confidence 999998854 4566 9999999864211 111000113457999999998899999999999999999999
Q ss_pred HHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHHHhcCCcE
Q 012217 289 EVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPM 368 (468)
Q Consensus 289 ~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP~ 368 (468)
+++.+|+.++++|||+++.... ...+.+|++|.++.++|+++++|+||.+||+|+++|+|||||||||++||+++||||
T Consensus 295 ela~~l~~~~~~flW~~r~~~~-~~~~~lp~~f~er~~~~g~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~ 373 (468)
T PLN02207 295 EIAHGLELCQYRFLWSLRTEEV-TNDDLLPEGFLDRVSGRGMICGWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPI 373 (468)
T ss_pred HHHHHHHHCCCcEEEEEeCCCc-cccccCCHHHHhhcCCCeEEEEeCCHHHHhcccccceeeecCccccHHHHHHcCCCE
Confidence 9999999999999999985321 123468899999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCcccchhhheeeceeEEEEeCC-----CCCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCCCch
Q 012217 369 ICWPFTGDQPTNGRYVCNEWGVGMEINGD-----DEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSS 443 (468)
Q Consensus 369 v~~P~~~DQ~~na~~~~~~~g~g~~~~~~-----~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg~s 443 (468)
|+||+++||+.||+++++++|+|+++..+ ++.++.++|+++|+++|++ ++++||+||+++++++++|+++||||
T Consensus 374 l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~~-~~~~~r~~a~~l~~~a~~A~~~GGSS 452 (468)
T PLN02207 374 VTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMNK-DNNVVRKRVMDISQMIQRATKNGGSS 452 (468)
T ss_pred EecCccccchhhHHHHHHHhCceEEEecccccccCCcccHHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhcCCCcH
Confidence 99999999999999987889999988421 1356999999999999963 46699999999999999999999999
Q ss_pred HHHHHHHHHHHHhcC
Q 012217 444 SLNLDKLVNEILLSN 458 (468)
Q Consensus 444 ~~~~~~~~~~~~~~~ 458 (468)
+.++++|+++++..+
T Consensus 453 ~~~l~~~v~~~~~~~ 467 (468)
T PLN02207 453 FAAIEKFIHDVIGIK 467 (468)
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999998653
No 9
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=4.4e-70 Score=555.84 Aligned_cols=419 Identities=29% Similarity=0.474 Sum_probs=327.0
Q ss_pred CCcEEEEEcCCCCccHHHHHHHHHHHHhCC----CEEEEEeCCcch----HHHHhhhcCCCCCCCCCeeEEeCCCCC-CC
Q 012217 9 SKVHAVCIPSPFQSHIKAMLKLAKLLHHKG----FHITFVNTEFNH----RRLLKARGQHSLDGLPSFRFEAIPDGL-PA 79 (468)
Q Consensus 9 ~~~~il~~p~p~~GHi~P~l~La~~L~~rG----h~Vt~~t~~~~~----~~~~~~~~~~~~~~~~gi~f~~l~~~~-~~ 79 (468)
.|+||+++|||++||++||++||+.|+.|| +.|||++++.+. .++...+.... ....+|+|+.+|++. +.
T Consensus 2 ~~~HVVlvPfpaqGHi~P~l~LAk~La~~g~~~~~~vT~~~t~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~lp~~~~p~ 80 (480)
T PLN00164 2 AAPTVVLLPVWGSGHLMSMLEAGKRLLASSGGGALSLTVLVMPPPTPESASEVAAHVRREA-ASGLDIRFHHLPAVEPPT 80 (480)
T ss_pred CCCEEEEeCCcchhHHHHHHHHHHHHHhCCCCCcEEEEEEEcCCCccchhHHHHHHHhhcc-cCCCCEEEEECCCCCCCC
Confidence 378999999999999999999999999997 899999987652 23433321111 111259999998653 22
Q ss_pred CCCCCCCc-------------------CCC--C--C--CCcccchHHHHHHHcCCCeEEEccccHHHHHHHhhhhhhhhh
Q 012217 80 SSDESPTA-------------------QDA--Y--S--LDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEK 134 (468)
Q Consensus 80 ~~~~~~~~-------------------~~~--~--~--~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~ 134 (468)
+ .+.. ..+ + . +|++++|+.++|+++|||++.|+++++++++.+++++.....
T Consensus 81 ~---~e~~~~~~~~~~~~~~~~l~~~L~~l~~pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~ 157 (480)
T PLN00164 81 D---AAGVEEFISRYIQLHAPHVRAAIAGLSCPVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALMLRLPALDEE 157 (480)
T ss_pred c---cccHHHHHHHHHHhhhHHHHHHHHhcCCCceEEEECCcchhHHHHHHHhCCCEEEEECccHHHHHHHhhhhhhccc
Confidence 2 1100 000 1 1 999999999999999999999999999999988877642111
Q ss_pred CCCCccccccccccccccccccccccCCCccCccCccCcccccCCCchhHHHHHHHHHHhcccCcEEEecchhhccHHHH
Q 012217 135 GLFPVKVLADKSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEATENASKASAIIIHTFDALEQQVL 214 (468)
Q Consensus 135 g~~p~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~p~l 214 (468)
...+.. .. + ....+||++.++..+++.+..... +.....+....+...+++++++|||++||+.++
T Consensus 158 ~~~~~~---~~--------~-~~~~iPGlp~l~~~dlp~~~~~~~--~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~ 223 (480)
T PLN00164 158 VAVEFE---EM--------E-GAVDVPGLPPVPASSLPAPVMDKK--SPNYAWFVYHGRRFMEAAGIIVNTAAELEPGVL 223 (480)
T ss_pred ccCccc---cc--------C-cceecCCCCCCChHHCCchhcCCC--cHHHHHHHHHHHhhhhcCEEEEechHHhhHHHH
Confidence 000111 00 0 122489998888888886654321 122233344445567789999999999999999
Q ss_pred HHHhhcC-------CCceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCcCCCHHHH
Q 012217 215 NALSFMF-------PHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQL 287 (468)
Q Consensus 215 ~~~~~~~-------p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~ 287 (468)
++++... |+ ++.|||+...... . ..+..+++|.+|||+++++|||||||||+..++.+++
T Consensus 224 ~~~~~~~~~~~~~~~~-v~~vGPl~~~~~~-~-----------~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~ 290 (480)
T PLN00164 224 AAIADGRCTPGRPAPT-VYPIGPVISLAFT-P-----------PAEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQV 290 (480)
T ss_pred HHHHhccccccCCCCc-eEEeCCCcccccc-C-----------CCccchHHHHHHHHhCCCCceEEEEecccccCCHHHH
Confidence 9998642 45 9999999753211 0 0122456899999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCEEEEEcCCCCC--------CCCCCCchhHHHHhhcCceEe-cccChHHhhcCCCcceeeeccChhhH
Q 012217 288 IEVAMGLVNSNHPFLWIIRPDLVT--------GETADLPAEFEVKAKEKGFVA-SWCPQEEVLKHPSIGGFLTHCGWNSI 358 (468)
Q Consensus 288 ~~~~~~l~~~~~~~lw~~~~~~~~--------~~~~~~~~~~~~~~~~~~~v~-~~~p~~~il~~~~~~~~v~hgG~~s~ 358 (468)
.+++.+|+.++++|||+++..... +....+|+++.+++.++++++ +|+||.+||+|+++|+|||||||||+
T Consensus 291 ~ela~gL~~s~~~flWv~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH~GwnS~ 370 (480)
T PLN00164 291 REIAAGLERSGHRFLWVLRGPPAAGSRHPTDADLDELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTHCGWNSV 370 (480)
T ss_pred HHHHHHHHHcCCCEEEEEcCCcccccccccccchhhhCChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEeecccchH
Confidence 999999999999999999854211 112348889999988888877 79999999999999999999999999
Q ss_pred HHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCC---CCCcchhHHHHHHHHHhcCc--hHHHHHHHHHHHHHHH
Q 012217 359 VESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGD---DEDVIRNEVEKLVREMMEGE--KGKQMRNKAMEWKGLA 433 (468)
Q Consensus 359 ~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~---~~~~~~~~l~~av~~~l~~~--~~~~~~~~a~~l~~~~ 433 (468)
+||+++|||||+||+++||+.||+++++++|+|+.+..+ ++.+++++|+++|+++|.++ +|+.+|+||+++++++
T Consensus 371 ~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~~~~~ 450 (480)
T PLN00164 371 LESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEMKAAC 450 (480)
T ss_pred HHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999887889999998531 13579999999999999764 4889999999999999
Q ss_pred HHHhCCCCchHHHHHHHHHHHHhcC
Q 012217 434 EEAAAPHGSSSLNLDKLVNEILLSN 458 (468)
Q Consensus 434 ~~a~~~gg~s~~~~~~~~~~~~~~~ 458 (468)
++++++||||+.++++|+++++++.
T Consensus 451 ~~a~~~gGSS~~~l~~~v~~~~~~~ 475 (480)
T PLN00164 451 RKAVEEGGSSYAALQRLAREIRHGA 475 (480)
T ss_pred HHHhcCCCcHHHHHHHHHHHHHhcc
Confidence 9999999999999999999998875
No 10
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=5.4e-70 Score=548.15 Aligned_cols=407 Identities=31% Similarity=0.558 Sum_probs=318.4
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHh-CCCEEEEEeCCcc-hHHHHhhhcCCCCCCCCCeeEEeCCCCCCCCCCCCCCc
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHH-KGFHITFVNTEFN-HRRLLKARGQHSLDGLPSFRFEAIPDGLPASSDESPTA 87 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~-rGh~Vt~~t~~~~-~~~~~~~~~~~~~~~~~gi~f~~l~~~~~~~~~~~~~~ 87 (468)
++||+++|||++||++||++||+.|++ +|+.|||++|+.+ ...+.+. . ...++++|+.++++++++. ....
T Consensus 3 ~~hvv~~P~p~qGHi~P~l~La~~La~~~G~~vT~v~t~~~~~~~~~~~---~--~~~~~i~~~~i~dglp~g~--~~~~ 75 (455)
T PLN02152 3 PPHFLLVTFPAQGHVNPSLRFARRLIKTTGTRVTFATCLSVIHRSMIPN---H--NNVENLSFLTFSDGFDDGV--ISNT 75 (455)
T ss_pred CcEEEEecCcccccHHHHHHHHHHHhhCCCcEEEEEeccchhhhhhhcc---C--CCCCCEEEEEcCCCCCCcc--cccc
Confidence 679999999999999999999999996 7999999999864 2222111 0 1123699999998887651 0101
Q ss_pred CCC---------------------------C--C--CCcccchHHHHHHHcCCCeEEEccccHHHHHHHhhhhhhhhhCC
Q 012217 88 QDA---------------------------Y--S--LDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEKGL 136 (468)
Q Consensus 88 ~~~---------------------------~--~--~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~g~ 136 (468)
.+. + . +|++++|+.++|+++|||++.|++++++.++.+++++. +.
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~~~~~~~~~----~~ 151 (455)
T PLN02152 76 DDVQNRLVNFERNGDKALSDFIEANLNGDSPVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVFDIYYNYST----GN 151 (455)
T ss_pred ccHHHHHHHHHHhccHHHHHHHHHhhccCCCceEEEECCccHhHHHHHHHhCCCEEEEECccHHHHHHHHHhhc----cC
Confidence 000 0 0 89999999999999999999999999999988776542 10
Q ss_pred CCccccccccccccccccccccccCCCccCccCccCcccccCCCchhHHHHHHHHHHhcc--cCcEEEecchhhccHHHH
Q 012217 137 FPVKVLADKSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEATENAS--KASAIIIHTFDALEQQVL 214 (468)
Q Consensus 137 ~p~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~nt~~~le~p~l 214 (468)
. ....+||++.++..+++.++............+.+..+... .++++|+|||++||+.++
T Consensus 152 ---~---------------~~~~iPglp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~ 213 (455)
T PLN02152 152 ---N---------------SVFEFPNLPSLEIRDLPSFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFL 213 (455)
T ss_pred ---C---------------CeeecCCCCCCchHHCchhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHH
Confidence 0 12358888888888898766532223333344444444332 246999999999999999
Q ss_pred HHHhhcCCCceeeeccccccccccccccccccccCC--CccchhhhhhhccccCCCCceEEEeecCCcCCCHHHHHHHHH
Q 012217 215 NALSFMFPHHLFTIGPLQLLLNQTEEQDGMLNSIGY--NLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIEVAM 292 (468)
Q Consensus 215 ~~~~~~~p~~v~~VGpl~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~ 292 (468)
++++. . + ++.|||+.+...... . ..+. +.++.+.+|.+|||++++++||||||||+..++.+++.+++.
T Consensus 214 ~~l~~-~-~-v~~VGPL~~~~~~~~-~-----~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~ 284 (455)
T PLN02152 214 TAIPN-I-E-MVAVGPLLPAEIFTG-S-----ESGKDLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELAR 284 (455)
T ss_pred Hhhhc-C-C-EEEEcccCccccccc-c-----ccCccccccccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHH
Confidence 99865 2 4 999999975321000 0 0000 112334589999999988999999999999999999999999
Q ss_pred HHHcCCCCEEEEEcCCCCC-----CC-C--CCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHHHhc
Q 012217 293 GLVNSNHPFLWIIRPDLVT-----GE-T--ADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCS 364 (468)
Q Consensus 293 ~l~~~~~~~lw~~~~~~~~-----~~-~--~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~ 364 (468)
+|+.++++|||+++..... +. . -.+|++|.++.++|++|++|+||.+||+|++||+|||||||||++||+++
T Consensus 285 gL~~s~~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~g~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~ 364 (455)
T PLN02152 285 ALIEGKRPFLWVITDKLNREAKIEGEEETEIEKIAGFRHELEEVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSSLESLVL 364 (455)
T ss_pred HHHHcCCCeEEEEecCcccccccccccccccccchhHHHhccCCeEEEeeCCHHHHhCCcccceEEeeCCcccHHHHHHc
Confidence 9999999999999853110 01 1 12468899999999999999999999999999999999999999999999
Q ss_pred CCcEEecCCCCCcccchhhheeeceeEEEEeCC-CCCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCCCch
Q 012217 365 GVPMICWPFTGDQPTNGRYVCNEWGVGMEINGD-DEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSS 443 (468)
Q Consensus 365 GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~-~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg~s 443 (468)
|||+|+||+++||+.||+++++.||+|+.+..+ ++.++.++|+++|+++|+| ++++||+||+++++++++++++||+|
T Consensus 365 GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~e~l~~av~~vm~~-~~~~~r~~a~~~~~~~~~a~~~ggsS 443 (455)
T PLN02152 365 GVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVERGEIRRCLEAVMEE-KSVELRESAEKWKRLAIEAGGEGGSS 443 (455)
T ss_pred CCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcCcHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHcCCCcH
Confidence 999999999999999999997778888887532 2357999999999999974 46689999999999999999999999
Q ss_pred HHHHHHHHHHHH
Q 012217 444 SLNLDKLVNEIL 455 (468)
Q Consensus 444 ~~~~~~~~~~~~ 455 (468)
+.++++||++++
T Consensus 444 ~~nl~~li~~i~ 455 (455)
T PLN02152 444 DKNVEAFVKTLC 455 (455)
T ss_pred HHHHHHHHHHhC
Confidence 999999999874
No 11
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=7.1e-70 Score=550.89 Aligned_cols=417 Identities=29% Similarity=0.536 Sum_probs=323.1
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHH--HHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCCCCCCCCCCCCc
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKL--LHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGLPASSDESPTA 87 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~--L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l~~~~~~~~~~~~~~ 87 (468)
++||+++|+|++||++||++||++ |++||++|||++|+.+.+++.+. +. ..+.+++..+++++|++. ....
T Consensus 8 ~~hvv~~P~pa~GHi~P~l~La~~L~L~~~G~~VT~v~t~~~~~~~~~~-~~----~~~~~~~~~~~~glp~~~--~~~~ 80 (456)
T PLN02210 8 ETHVLMVTLAFQGHINPMLKLAKHLSLSSKNLHFTLATTEQARDLLSTV-EK----PRRPVDLVFFSDGLPKDD--PRAP 80 (456)
T ss_pred CCEEEEeCCcccccHHHHHHHHHHHHhhcCCcEEEEEeccchhhhhccc-cC----CCCceEEEECCCCCCCCc--ccCH
Confidence 789999999999999999999999 56999999999999987765332 11 123688888888887652 1100
Q ss_pred C--------C--------C---C-C---CCcccchHHHHHHHcCCCeEEEccccHHHHHHHhhhhhhhhhCCCCcccccc
Q 012217 88 Q--------D--------A---Y-S---LDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEKGLFPVKVLAD 144 (468)
Q Consensus 88 ~--------~--------~---~-~---~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~ 144 (468)
. . + + . +|.+++|+.++|+++|||.++||+.++.+++.+.+++.. .+ +.. .
T Consensus 81 ~~~~~~~~~~~~~~l~~~l~~~~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~~~~~~~--~~--~~~---~ 153 (456)
T PLN02210 81 ETLLKSLNKVGAKNLSKIIEEKRYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSVYYRYYMK--TN--SFP---D 153 (456)
T ss_pred HHHHHHHHHhhhHHHHHHHhcCCCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHHHHHhhhhc--cC--CCC---c
Confidence 0 0 0 0 0 999999999999999999999999999998877765421 11 111 1
Q ss_pred ccccccccccccccccCCCccCccCccCcccccCCCchhHHHHHHHHHHhcccCcEEEecchhhccHHHHHHHhhcCCCc
Q 012217 145 KSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEATENASKASAIIIHTFDALEQQVLNALSFMFPHH 224 (468)
Q Consensus 145 ~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~p~l~~~~~~~p~~ 224 (468)
.. + .+ ....+|+++.++..+++.++.... .......+.+.......++++++|||.+||+.+++++++ .++
T Consensus 154 ~~---~--~~-~~~~~Pgl~~~~~~dl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~-~~~- 224 (456)
T PLN02210 154 LE---D--LN-QTVELPALPLLEVRDLPSFMLPSG-GAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMAD-LKP- 224 (456)
T ss_pred cc---c--cC-CeeeCCCCCCCChhhCChhhhcCC-chHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHHhh-cCC-
Confidence 00 0 00 123578888777888876554321 111222233444455677899999999999999999887 355
Q ss_pred eeeeccccccc--cccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCcCCCHHHHHHHHHHHHcCCCCEE
Q 012217 225 LFTIGPLQLLL--NQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFL 302 (468)
Q Consensus 225 v~~VGpl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~l 302 (468)
+++|||+++.. ...... .......++|..+++|.+|||++++++||||||||+...+.+++.+++.+|+.+|.+||
T Consensus 225 v~~VGPl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~fl 302 (456)
T PLN02210 225 VIPIGPLVSPFLLGDDEEE--TLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVPFL 302 (456)
T ss_pred EEEEcccCchhhcCccccc--ccccccccccccchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEE
Confidence 99999997521 000000 00000112355667899999999889999999999998899999999999999999999
Q ss_pred EEEcCCCCCCCCCCCchhHHHHh-hcCceEecccChHHhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCCCcccch
Q 012217 303 WIIRPDLVTGETADLPAEFEVKA-KEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNG 381 (468)
Q Consensus 303 w~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na 381 (468)
|+++.... ...+.++.++. ++|++|++|+||.+||+|+++|+|||||||||++|++++|||||+||+++||+.||
T Consensus 303 w~~~~~~~----~~~~~~~~~~~~~~~g~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P~~~DQ~~na 378 (456)
T PLN02210 303 WVIRPKEK----AQNVQVLQEMVKEGQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYPSWTDQPIDA 378 (456)
T ss_pred EEEeCCcc----ccchhhHHhhccCCCeEEEecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecccccccHHHH
Confidence 99985311 11334566666 48888999999999999999999999999999999999999999999999999999
Q ss_pred hhheeeceeEEEEeCC--CCCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHH
Q 012217 382 RYVCNEWGVGMEINGD--DEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEIL 455 (468)
Q Consensus 382 ~~~~~~~g~g~~~~~~--~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~~~~~ 455 (468)
+++++++|+|+.+... ++.+++++|+++|+++|.+++|++||+||++|++.+++|+++||||+.++++||++++
T Consensus 379 ~~~~~~~g~G~~l~~~~~~~~~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~l~~~v~~~~ 454 (456)
T PLN02210 379 RLLVDVFGIGVRMRNDAVDGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSARNLDLFISDIT 454 (456)
T ss_pred HHHHHHhCeEEEEeccccCCcCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Confidence 9996669999999632 2468999999999999988888899999999999999999999999999999999986
No 12
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=7.7e-69 Score=541.41 Aligned_cols=421 Identities=28% Similarity=0.473 Sum_probs=320.2
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCC----CCCCCCCCCCC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIP----DGLPASSDESP 85 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l~----~~~~~~~~~~~ 85 (468)
++||+++|||++||++||++||+.|+.||+.|||++|+.+..++.+.... ..++|+|+.+| +++|++ .+
T Consensus 6 ~~HVvl~P~paqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~----~~~~i~~~~lp~p~~dglp~~---~~ 78 (472)
T PLN02670 6 VLHVAMFPWLAMGHLIPFLRLSKLLAQKGHKISFISTPRNLHRLPKIPSQ----LSSSITLVSFPLPSVPGLPSS---AE 78 (472)
T ss_pred CcEEEEeCChhhhHHHHHHHHHHHHHhCCCEEEEEeCCchHHhhhhcccc----CCCCeeEEECCCCccCCCCCC---cc
Confidence 68999999999999999999999999999999999999988766542110 11269999988 677755 22
Q ss_pred CcCCCC-----C-------------------------CCcccchHHHHHHHcCCCeEEEccccHHHHHHHhhhhhhhhhC
Q 012217 86 TAQDAY-----S-------------------------LDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEKG 135 (468)
Q Consensus 86 ~~~~~~-----~-------------------------~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~g 135 (468)
...++. . +|++++|+.++|+++|||+++|++++++.++.+++.......+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~~~~~ 158 (472)
T PLN02670 79 SSTDVPYTKQQLLKKAFDLLEPPLTTFLETSKPDWIIYDYASHWLPSIAAELGISKAFFSLFTAATLSFIGPPSSLMEGG 158 (472)
T ss_pred cccccchhhHHHHHHHHHHhHHHHHHHHHhCCCcEEEECCcchhHHHHHHHcCCCEEEEehhhHHHHHHHhhhHhhhhcc
Confidence 222221 0 9999999999999999999999999998888766544332233
Q ss_pred CCCccccccccccccccccccccccCCCcc--CccCccCcccccCCCchhHHHHHHHHHHhcccCcEEEecchhhccHHH
Q 012217 136 LFPVKVLADKSCLTKEYLNSLIDWIPGMKD--IRIRDLPSFIQSTDPKDMMFNLCVEATENASKASAIIIHTFDALEQQV 213 (468)
Q Consensus 136 ~~p~~~~~~~~~~~~~~~~~~~~~~pg~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~p~ 213 (468)
..+.. ... +...+.++|+.+. ++..+++.++............+.+......+++++|+|||++||+.+
T Consensus 159 ~~~~~---~~~------~~~~p~~~P~~~~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~gvlvNTf~eLE~~~ 229 (472)
T PLN02670 159 DLRST---AED------FTVVPPWVPFESNIVFRYHEVTKYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSSPEFEPEW 229 (472)
T ss_pred cCCCc---ccc------ccCCCCcCCCCccccccHHHhhHHHhccCccchHHHHHHHHHhhcccCCEEEEeCHHHHhHHH
Confidence 22211 000 0001122333322 445567655532111111222233444456678899999999999999
Q ss_pred HHHHhhcCCCceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCcCCCHHHHHHHHHH
Q 012217 214 LNALSFMFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIEVAMG 293 (468)
Q Consensus 214 l~~~~~~~p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~ 293 (468)
+++++..+.+.++.|||+.+......+. .. .+. ..+++|.+|||++++++||||||||+..++.+++.+++.+
T Consensus 230 l~~l~~~~~~~v~~VGPl~~~~~~~~~~-----~~-~~~-~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~g 302 (472)
T PLN02670 230 FDLLSDLYRKPIIPIGFLPPVIEDDEED-----DT-IDV-KGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALG 302 (472)
T ss_pred HHHHHHhhCCCeEEEecCCccccccccc-----cc-ccc-chhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHH
Confidence 9999876533399999997531110000 00 000 1125799999999889999999999999999999999999
Q ss_pred HHcCCCCEEEEEcCCCCC--CCCCCCchhHHHHhhcCceEe-cccChHHhhcCCCcceeeeccChhhHHHHHhcCCcEEe
Q 012217 294 LVNSNHPFLWIIRPDLVT--GETADLPAEFEVKAKEKGFVA-SWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMIC 370 (468)
Q Consensus 294 l~~~~~~~lw~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~-~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~ 370 (468)
|+.++++|||+++..... .....+|++|.++++++++++ +|+||.+||+|+++|+|||||||||++||+++|||||+
T Consensus 303 l~~s~~~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~ 382 (472)
T PLN02670 303 LEKSETPFFWVLRNEPGTTQNALEMLPDGFEERVKGRGMIHVGWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLIL 382 (472)
T ss_pred HHHCCCCEEEEEcCCcccccchhhcCChHHHHhccCCCeEEeCcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEe
Confidence 999999999999863211 112358999999998888886 89999999999999999999999999999999999999
Q ss_pred cCCCCCcccchhhheeeceeEEEEeCC--CCCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCCCchHHHHH
Q 012217 371 WPFTGDQPTNGRYVCNEWGVGMEINGD--DEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLD 448 (468)
Q Consensus 371 ~P~~~DQ~~na~~~~~~~g~g~~~~~~--~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~ 448 (468)
||+++||+.||+++ +++|+|+.+... ++.++.++|+++|+++|.+++|++||+||+++++.+++ .+...+.++
T Consensus 383 ~P~~~DQ~~Na~~v-~~~g~Gv~l~~~~~~~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~----~~~~~~~~~ 457 (472)
T PLN02670 383 FPVLNEQGLNTRLL-HGKKLGLEVPRDERDGSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGD----MDRNNRYVD 457 (472)
T ss_pred CcchhccHHHHHHH-HHcCeeEEeeccccCCcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhC----cchhHHHHH
Confidence 99999999999999 678999999642 13589999999999999888888999999999999996 567789999
Q ss_pred HHHHHHHhcC
Q 012217 449 KLVNEILLSN 458 (468)
Q Consensus 449 ~~~~~~~~~~ 458 (468)
+|++.|.++.
T Consensus 458 ~~~~~l~~~~ 467 (472)
T PLN02670 458 ELVHYLRENR 467 (472)
T ss_pred HHHHHHHHhc
Confidence 9999999876
No 13
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=1.1e-68 Score=536.14 Aligned_cols=405 Identities=25% Similarity=0.395 Sum_probs=316.7
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCC--CCCCCCCCCCCCc
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIP--DGLPASSDESPTA 87 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l~--~~~~~~~~~~~~~ 87 (468)
++||++||||++||++||++||+.|+.+|+.|||++|+.+..++.+. .. ....-.+++.++| +++|++ .+.+
T Consensus 5 ~~Hvvl~P~paqGHi~P~l~LAk~La~~g~~vT~~tt~~~~~~~~~~--~~-~~~~~~v~~~~~p~~~glp~g---~e~~ 78 (453)
T PLN02764 5 KFHVLMYPWFATGHMTPFLFLANKLAEKGHTVTFLLPKKALKQLEHL--NL-FPHNIVFRSVTVPHVDGLPVG---TETV 78 (453)
T ss_pred CcEEEEECCcccccHHHHHHHHHHHHhCCCEEEEEeCcchhhhhccc--cc-CCCCceEEEEECCCcCCCCCc---cccc
Confidence 78999999999999999999999999999999999999887665442 10 0100137777787 677655 2221
Q ss_pred CCCC---------------------------C---CCcccchHHHHHHHcCCCeEEEccccHHHHHHHhhhhhhhhhCCC
Q 012217 88 QDAY---------------------------S---LDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEKGLF 137 (468)
Q Consensus 88 ~~~~---------------------------~---~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~g~~ 137 (468)
.++. . +|+ ++|+.++|+++|||++.|++++++.++++.. + .+..
T Consensus 79 ~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~~iV~D~-~~w~~~vA~~~gIP~~~f~~~~a~~~~~~~~-~----~~~~ 152 (453)
T PLN02764 79 SEIPVTSADLLMSAMDLTRDQVEVVVRAVEPDLIFFDF-AHWIPEVARDFGLKTVKYVVVSASTIASMLV-P----GGEL 152 (453)
T ss_pred ccCChhHHHHHHHHHHHhHHHHHHHHHhCCCCEEEECC-chhHHHHHHHhCCCEEEEEcHHHHHHHHHhc-c----cccC
Confidence 1111 0 895 8999999999999999999999988877642 1 1111
Q ss_pred CccccccccccccccccccccccCCCcc----CccCccCcccc--cCCCchhHHHHHHHHHHhcccCcEEEecchhhccH
Q 012217 138 PVKVLADKSCLTKEYLNSLIDWIPGMKD----IRIRDLPSFIQ--STDPKDMMFNLCVEATENASKASAIIIHTFDALEQ 211 (468)
Q Consensus 138 p~~~~~~~~~~~~~~~~~~~~~~pg~~~----~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~ 211 (468)
+ ..+||++. ++.++++.+.. .....+.....+.+......+++++++|||++||+
T Consensus 153 ~-------------------~~~pglp~~~v~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE~ 213 (453)
T PLN02764 153 G-------------------VPPPGYPSSKVLLRKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEG 213 (453)
T ss_pred C-------------------CCCCCCCCCcccCcHhhCcchhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhhH
Confidence 0 11356652 44555554321 11111223334444445667888999999999999
Q ss_pred HHHHHHhhcCCCceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCcCCCHHHHHHHH
Q 012217 212 QVLNALSFMFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIEVA 291 (468)
Q Consensus 212 p~l~~~~~~~p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~ 291 (468)
.++++++...+++++.|||+.+.... . ...+++|.+|||+++++|||||||||+..++.+++.+++
T Consensus 214 ~~~~~~~~~~~~~v~~VGPL~~~~~~---------~-----~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela 279 (453)
T PLN02764 214 NFCDYIEKHCRKKVLLTGPVFPEPDK---------T-----RELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELC 279 (453)
T ss_pred HHHHHHHhhcCCcEEEeccCccCccc---------c-----ccchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHH
Confidence 99999987544349999999753210 0 012457999999999999999999999999999999999
Q ss_pred HHHHcCCCCEEEEEcCCCCC-CCCCCCchhHHHHhhcCceEe-cccChHHhhcCCCcceeeeccChhhHHHHHhcCCcEE
Q 012217 292 MGLVNSNHPFLWIIRPDLVT-GETADLPAEFEVKAKEKGFVA-SWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMI 369 (468)
Q Consensus 292 ~~l~~~~~~~lw~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~-~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v 369 (468)
.+|+.++.+|+|+++..... .....+|++|.++++++++++ +|+||.+||+|+++++|||||||||++||+++|||||
T Consensus 280 ~gL~~s~~pflwv~r~~~~~~~~~~~lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l 359 (453)
T PLN02764 280 LGMELTGSPFLVAVKPPRGSSTIQEALPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIV 359 (453)
T ss_pred HHHHhCCCCeEEEEeCCCCCcchhhhCCcchHhhhccCCcEEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEE
Confidence 99999999999999953211 113458999999998888877 7999999999999999999999999999999999999
Q ss_pred ecCCCCCcccchhhheeeceeEEEEeCCC-CCcchhHHHHHHHHHhcC--chHHHHHHHHHHHHHHHHHHhCCCCchHHH
Q 012217 370 CWPFTGDQPTNGRYVCNEWGVGMEINGDD-EDVIRNEVEKLVREMMEG--EKGKQMRNKAMEWKGLAEEAAAPHGSSSLN 446 (468)
Q Consensus 370 ~~P~~~DQ~~na~~~~~~~g~g~~~~~~~-~~~~~~~l~~av~~~l~~--~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~ 446 (468)
+||+++||+.||+++++++|+|+.+...+ +.++.++|+++|+++|++ ++|+++|++|+++++++++ +|+|..+
T Consensus 360 ~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~~----~GSS~~~ 435 (453)
T PLN02764 360 LVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLAS----PGLLTGY 435 (453)
T ss_pred eCCcccchHHHHHHHHHHhceEEEeccccCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHh----cCCHHHH
Confidence 99999999999999977899999985311 358999999999999976 4688999999999999964 8999999
Q ss_pred HHHHHHHHHhcCCCCCC
Q 012217 447 LDKLVNEILLSNKHNSS 463 (468)
Q Consensus 447 ~~~~~~~~~~~~~~~~~ 463 (468)
+++||+++++....+++
T Consensus 436 l~~lv~~~~~~~~~~~~ 452 (453)
T PLN02764 436 VDNFIESLQDLVSGTSH 452 (453)
T ss_pred HHHHHHHHHHhcccccC
Confidence 99999999998766643
No 14
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=9.7e-69 Score=538.01 Aligned_cols=413 Identities=26% Similarity=0.432 Sum_probs=318.8
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhC-CCEEEEEeCCcchHHHH--hhhcCCCCCCCCCeeEEeCCCCCCCCC-C-CC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHK-GFHITFVNTEFNHRRLL--KARGQHSLDGLPSFRFEAIPDGLPASS-D-ES 84 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~r-Gh~Vt~~t~~~~~~~~~--~~~~~~~~~~~~gi~f~~l~~~~~~~~-~-~~ 84 (468)
++||+++|+|++||++||++||+.|+.+ |..|||++++.+..++. ...... ...++|+|+.+|+...++. . +.
T Consensus 3 ~pHvvl~P~p~qGHi~P~l~LAk~La~~~g~~vT~v~t~~~~~~~~~~~~~~~~--~~~~~i~~~~lp~~~~~~l~~~~~ 80 (470)
T PLN03015 3 QPHALLVASPGLGHLIPILELGNRLSSVLNIHVTILAVTSGSSSPTETEAIHAA--AARTTCQITEIPSVDVDNLVEPDA 80 (470)
T ss_pred CcEEEEECCcccccHHHHHHHHHHHHhCCCCeEEEEECCCchhhhccccccccc--cCCCceEEEECCCCccccCCCCCc
Confidence 6799999999999999999999999987 99999999887654432 111100 0012599999984321110 0 00
Q ss_pred CC-------c-----------CCC--C-C---CCcccchHHHHHHHcCCC-eEEEccccHHHHHHHhhhhhhhhhCCCCc
Q 012217 85 PT-------A-----------QDA--Y-S---LDGFLPFTITAAQQLGLP-IVLFFTISACSFMGFKQFQTFKEKGLFPV 139 (468)
Q Consensus 85 ~~-------~-----------~~~--~-~---~D~~~~~~~~vA~~lgIP-~v~~~~~~~~~~~~~~~~~~~~~~g~~p~ 139 (468)
.. . ..+ + . +|++++|+.++|+++||| .++|++++++.++.+++++.. .+..+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~~l~~~--~~~~~~ 158 (470)
T PLN03015 81 TIFTKMVVKMRAMKPAVRDAVKSMKRKPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPVL--DTVVEG 158 (470)
T ss_pred cHHHHHHHHHHhchHHHHHHHHhcCCCCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHHHHHHHHhhhhh--hccccc
Confidence 00 0 000 0 0 899999999999999999 588888888777777776542 111110
Q ss_pred cccccccccccccccccccccCCCccCccCccCcccccCCCchhHHHHHHHHHHhcccCcEEEecchhhccHHHHHHHhh
Q 012217 140 KVLADKSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEATENASKASAIIIHTFDALEQQVLNALSF 219 (468)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~p~l~~~~~ 219 (468)
. .. . .+ ....+||++.++..+++..+.... ......+.+..+...+++++++|||++||+.+++.++.
T Consensus 159 ~----~~----~-~~-~~~~vPg~p~l~~~dlp~~~~~~~--~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~~~~l~~ 226 (470)
T PLN03015 159 E----YV----D-IK-EPLKIPGCKPVGPKELMETMLDRS--DQQYKECVRSGLEVPMSDGVLVNTWEELQGNTLAALRE 226 (470)
T ss_pred c----cC----C-CC-CeeeCCCCCCCChHHCCHhhcCCC--cHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHh
Confidence 0 00 0 01 224589998888888886554321 12122333444557789999999999999999999987
Q ss_pred cC-------CCceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCcCCCHHHHHHHHH
Q 012217 220 MF-------PHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIEVAM 292 (468)
Q Consensus 220 ~~-------p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~ 292 (468)
.+ ++ ++.|||+..... . .+.+++|.+|||+++++|||||||||+..++.+++.+++.
T Consensus 227 ~~~~~~~~~~~-v~~VGPl~~~~~----------~-----~~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~ 290 (470)
T PLN03015 227 DMELNRVMKVP-VYPIGPIVRTNV----------H-----VEKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAW 290 (470)
T ss_pred hcccccccCCc-eEEecCCCCCcc----------c-----ccchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHH
Confidence 52 45 999999974210 0 0123479999999999999999999999999999999999
Q ss_pred HHHcCCCCEEEEEcCCCC---------CCCCCCCchhHHHHhhcCceEe-cccChHHhhcCCCcceeeeccChhhHHHHH
Q 012217 293 GLVNSNHPFLWIIRPDLV---------TGETADLPAEFEVKAKEKGFVA-SWCPQEEVLKHPSIGGFLTHCGWNSIVESL 362 (468)
Q Consensus 293 ~l~~~~~~~lw~~~~~~~---------~~~~~~~~~~~~~~~~~~~~v~-~~~p~~~il~~~~~~~~v~hgG~~s~~eal 362 (468)
+|+.++++|||+++.+.. ....+.+|++|.+|+.++++++ +|+||.+||+|++||+|||||||||++||+
T Consensus 291 gl~~s~~~FlWv~r~~~~~~~~~~~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai 370 (470)
T PLN03015 291 GLELSGQRFVWVLRRPASYLGASSSDDDQVSASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLSHCGWSSVLESL 370 (470)
T ss_pred HHHhCCCcEEEEEecCccccccccccccchhhcCChHHHHhhccCceEEEecCCHHHHhccCccCeEEecCCchhHHHHH
Confidence 999999999999974311 0112358899999999988766 899999999999999999999999999999
Q ss_pred hcCCcEEecCCCCCcccchhhheeeceeEEEEeC--CCCCcchhHHHHHHHHHhcC--chHHHHHHHHHHHHHHHHHHhC
Q 012217 363 CSGVPMICWPFTGDQPTNGRYVCNEWGVGMEING--DDEDVIRNEVEKLVREMMEG--EKGKQMRNKAMEWKGLAEEAAA 438 (468)
Q Consensus 363 ~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~--~~~~~~~~~l~~av~~~l~~--~~~~~~~~~a~~l~~~~~~a~~ 438 (468)
++|||||+||+++||+.||++++++||+|+++.. .++.+++++|+++|+++|++ ++|+++|+||+++++++++|++
T Consensus 371 ~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~lk~~a~~Av~ 450 (470)
T PLN03015 371 TKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAEEVRVSSERAWS 450 (470)
T ss_pred HcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999889999999952 12479999999999999963 6789999999999999999999
Q ss_pred CCCchHHHHHHHHHHH
Q 012217 439 PHGSSSLNLDKLVNEI 454 (468)
Q Consensus 439 ~gg~s~~~~~~~~~~~ 454 (468)
+||||+.++++|++.+
T Consensus 451 eGGSS~~nl~~~~~~~ 466 (470)
T PLN03015 451 HGGSSYNSLFEWAKRC 466 (470)
T ss_pred CCCcHHHHHHHHHHhc
Confidence 9999999999999886
No 15
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=1.3e-68 Score=546.88 Aligned_cols=422 Identities=30% Similarity=0.470 Sum_probs=323.3
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCC--CEEEEEeCCcchHHHH--h-hhcCCCCCCCCCeeEEeCCCCCCCCCCC-
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKG--FHITFVNTEFNHRRLL--K-ARGQHSLDGLPSFRFEAIPDGLPASSDE- 83 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rG--h~Vt~~t~~~~~~~~~--~-~~~~~~~~~~~gi~f~~l~~~~~~~~~~- 83 (468)
|+||+++|||++||++||++||+.|+.+| ..|||++|+.+..++. + ..........++|+|+.+|++.+....+
T Consensus 2 ~~hvvl~P~paqGHi~P~l~LAk~La~~G~~~~vT~v~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lp~~~~~~~~~~ 81 (481)
T PLN02554 2 KIELVFIPSPGIGHLRPTVELAKLLVDSDDRLSITVIIIPSRSGDDASSSAYIASLSASSEDRLRYEVISAGDQPTTEDP 81 (481)
T ss_pred ceEEEEeCCcchhhHHHHHHHHHHHHhCCCCEEEEEEeCCCccchhhhhhhhhhhcccCCCCCeEEEEcCCCCCCcccch
Confidence 78999999999999999999999999998 8899999987754321 1 0100000012369999998665311000
Q ss_pred ----------------CC-Cc--------CCCCC--CCcccchHHHHHHHcCCCeEEEccccHHHHHHHhhhhhhhhhCC
Q 012217 84 ----------------SP-TA--------QDAYS--LDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEKGL 136 (468)
Q Consensus 84 ----------------~~-~~--------~~~~~--~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~g~ 136 (468)
.+ .. ..+.. +|++++|+.++|+++|||++.|++++++.++.+++++.....+-
T Consensus 82 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~pv~cvV~D~f~~wa~dvA~~lgIP~~~F~t~sa~~~~~~~~~~~~~~~~~ 161 (481)
T PLN02554 82 TFQSYIDNQKPKVRDAVAKLVDDSSTPSSPRLAGFVVDMFCTSMIDVANEFGVPSYMFYTSNATFLGLQLHVQMLYDEKK 161 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCCCeEEEEECCcchhHHHHHHHhCCCEEEEeCCcHHHHHHHHhhhhhccccc
Confidence 00 00 00111 89999999999999999999999999999999888764321111
Q ss_pred CCccccccccccccccccccccccCCCc-cCccCccCcccccCCCchhHHHHHHHHHHhcccCcEEEecchhhccHHHHH
Q 012217 137 FPVKVLADKSCLTKEYLNSLIDWIPGMK-DIRIRDLPSFIQSTDPKDMMFNLCVEATENASKASAIIIHTFDALEQQVLN 215 (468)
Q Consensus 137 ~p~~~~~~~~~~~~~~~~~~~~~~pg~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~p~l~ 215 (468)
.++....+. .....+||++ +++..+++..... +.....+.+.......++++++||+.+||+.+..
T Consensus 162 ~~~~~~~~~---------~~~v~iPgl~~pl~~~dlp~~~~~----~~~~~~~~~~~~~~~~~~gvlvNt~~eLe~~~~~ 228 (481)
T PLN02554 162 YDVSELEDS---------EVELDVPSLTRPYPVKCLPSVLLS----KEWLPLFLAQARRFREMKGILVNTVAELEPQALK 228 (481)
T ss_pred cCccccCCC---------CceeECCCCCCCCCHHHCCCcccC----HHHHHHHHHHHHhcccCCEEEEechHHHhHHHHH
Confidence 111100000 0223588884 6777788755432 1223444455566778999999999999999998
Q ss_pred HHhh---cCCCceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCcCCCHHHHHHHHH
Q 012217 216 ALSF---MFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIEVAM 292 (468)
Q Consensus 216 ~~~~---~~p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~ 292 (468)
.++. ..|+ ++.|||+....... . ..+ ...+++|.+|||++++++||||||||+..++.+++.+++.
T Consensus 229 ~l~~~~~~~~~-v~~vGpl~~~~~~~--------~-~~~-~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~ 297 (481)
T PLN02554 229 FFSGSSGDLPP-VYPVGPVLHLENSG--------D-DSK-DEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAI 297 (481)
T ss_pred HHHhcccCCCC-EEEeCCCccccccc--------c-ccc-cccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHH
Confidence 8875 3466 99999994321110 0 000 1134579999999988899999999999999999999999
Q ss_pred HHHcCCCCEEEEEcCCCC----------CCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHHH
Q 012217 293 GLVNSNHPFLWIIRPDLV----------TGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESL 362 (468)
Q Consensus 293 ~l~~~~~~~lw~~~~~~~----------~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal 362 (468)
+|++++++|||+++.... ....+.+|+++.+++++|+++++|+||.+||.|+++++|||||||||++||+
T Consensus 298 ~l~~~~~~flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~ 377 (481)
T PLN02554 298 ALERSGHRFLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRTKDIGKVIGWAPQVAVLAKPAIGGFVTHCGWNSILESL 377 (481)
T ss_pred HHHHcCCCeEEEEcCCcccccccccccccchhhhCChHHHHHhccCceEEeeCCHHHHhCCcccCcccccCccchHHHHH
Confidence 999999999999985311 0011246889999999999999999999999999999999999999999999
Q ss_pred hcCCcEEecCCCCCcccchhhheeeceeEEEEeC---------CCCCcchhHHHHHHHHHhc-CchHHHHHHHHHHHHHH
Q 012217 363 CSGVPMICWPFTGDQPTNGRYVCNEWGVGMEING---------DDEDVIRNEVEKLVREMME-GEKGKQMRNKAMEWKGL 432 (468)
Q Consensus 363 ~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~---------~~~~~~~~~l~~av~~~l~-~~~~~~~~~~a~~l~~~ 432 (468)
++|||||+||+++||+.||+++++++|+|+.+.. +.+.+++++|+++|+++|+ |+ +||+||++++++
T Consensus 378 ~~GVP~l~~P~~~DQ~~Na~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~~---~~r~~a~~l~~~ 454 (481)
T PLN02554 378 WFGVPMAAWPLYAEQKFNAFEMVEELGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQDS---DVRKRVKEMSEK 454 (481)
T ss_pred HcCCCEEecCccccchhhHHHHHHHhCceEEeeccccccccccccCeEcHHHHHHHHHHHhcCCH---HHHHHHHHHHHH
Confidence 9999999999999999999765589999999852 1146899999999999996 55 899999999999
Q ss_pred HHHHhCCCCchHHHHHHHHHHHHhcC
Q 012217 433 AEEAAAPHGSSSLNLDKLVNEILLSN 458 (468)
Q Consensus 433 ~~~a~~~gg~s~~~~~~~~~~~~~~~ 458 (468)
+++++++||+|+.++++||++++++.
T Consensus 455 ~~~av~~gGss~~~l~~lv~~~~~~~ 480 (481)
T PLN02554 455 CHVALMDGGSSHTALKKFIQDVTKNI 480 (481)
T ss_pred HHHHhcCCChHHHHHHHHHHHHHhhC
Confidence 99999999999999999999998864
No 16
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=7.4e-68 Score=532.10 Aligned_cols=406 Identities=31% Similarity=0.530 Sum_probs=308.9
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCC--CEEEE--EeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCCCCCCCCCCC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKG--FHITF--VNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGLPASSDESP 85 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rG--h~Vt~--~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l~~~~~~~~~~~~ 85 (468)
+-||+++|+|++||++||++||++|+.+| +.||+ ++++.+...+.+..... ....++|+|+.+|++.+... +..
T Consensus 3 ~~Hvvl~P~p~qGHi~P~l~LA~~La~~g~~~~vti~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~lp~~~~~~~-~~~ 80 (451)
T PLN03004 3 EEAIVLYPAPPIGHLVSMVELGKTILSKNPSLSIHIILVPPPYQPESTATYISSV-SSSFPSITFHHLPAVTPYSS-SST 80 (451)
T ss_pred CcEEEEeCCcccchHHHHHHHHHHHHhCCCceEEEEEEecCcchhhhhhhhhccc-cCCCCCeEEEEcCCCCCCCC-ccc
Confidence 45999999999999999999999999998 45555 55555443322211110 11223699999987653210 000
Q ss_pred Cc----------------------CCC----C-C---CCcccchHHHHHHHcCCCeEEEccccHHHHHHHhhhhhhhhhC
Q 012217 86 TA----------------------QDA----Y-S---LDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEKG 135 (468)
Q Consensus 86 ~~----------------------~~~----~-~---~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~g 135 (468)
.. ..+ + . +|++++|+.++|+++|||.++|++++++.++.+.+++... .
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~pv~cII~D~~~~Wa~~vA~~lgIP~v~F~t~sA~~~~~~~~~~~~~--~ 158 (451)
T PLN03004 81 SRHHHESLLLEILCFSNPSVHRTLFSLSRNFNVRAMIIDFFCTAVLDITADFTFPVYFFYTSGAACLAFSFYLPTID--E 158 (451)
T ss_pred cccCHHHHHHHHHHhhhHHHHHHHHhcCCCCCceEEEECCcchhHHHHHHHhCCCEEEEeCHhHHHHHHHHHHHhcc--c
Confidence 00 000 0 0 8999999999999999999999999999999888766321 1
Q ss_pred CCCccccccccccccccccccccccCCCccCccCccCcccccCCCchhHHHHHHHHHHhcccCcEEEecchhhccHHHHH
Q 012217 136 LFPVKVLADKSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEATENASKASAIIIHTFDALEQQVLN 215 (468)
Q Consensus 136 ~~p~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~p~l~ 215 (468)
..+.. .. .+.....+||++.++..+++.+.... .......+........+++++++|||++||+.+++
T Consensus 159 ~~~~~---~~-------~~~~~v~iPg~p~l~~~dlp~~~~~~--~~~~~~~~~~~~~~~~~~~~vl~NTf~eLE~~~l~ 226 (451)
T PLN03004 159 TTPGK---NL-------KDIPTVHIPGVPPMKGSDMPKAVLER--DDEVYDVFIMFGKQLSKSSGIIINTFDALENRAIK 226 (451)
T ss_pred ccccc---cc-------ccCCeecCCCCCCCChHHCchhhcCC--chHHHHHHHHHHHhhcccCeeeeeeHHHhHHHHHH
Confidence 11110 00 00023468999888888888766532 22233445555566677889999999999999999
Q ss_pred HHhhcC-CCceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCcCCCHHHHHHHHHHH
Q 012217 216 ALSFMF-PHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIEVAMGL 294 (468)
Q Consensus 216 ~~~~~~-p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l 294 (468)
+++..+ .++++.|||+...... . . . ..+ .+.+|.+|||++++++||||||||+..++.+++.+++.+|
T Consensus 227 ~l~~~~~~~~v~~vGPl~~~~~~-~-------~-~-~~~-~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL 295 (451)
T PLN03004 227 AITEELCFRNIYPIGPLIVNGRI-E-------D-R-NDN-KAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGL 295 (451)
T ss_pred HHHhcCCCCCEEEEeeeccCccc-c-------c-c-ccc-hhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHH
Confidence 998753 2239999999742110 0 0 0 111 3457999999998899999999999999999999999999
Q ss_pred HcCCCCEEEEEcCCCCC-----CCCCCCchhHHHHhhcCceE-ecccChHHhhcCCCcceeeeccChhhHHHHHhcCCcE
Q 012217 295 VNSNHPFLWIIRPDLVT-----GETADLPAEFEVKAKEKGFV-ASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPM 368 (468)
Q Consensus 295 ~~~~~~~lw~~~~~~~~-----~~~~~~~~~~~~~~~~~~~v-~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP~ 368 (468)
+.++++|||+++..... .....+|++|.+|+++++.+ .+|+||.+||+|+++|+|||||||||++||+++|||+
T Consensus 296 ~~s~~~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~ 375 (451)
T PLN03004 296 EKSGQRFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPM 375 (451)
T ss_pred HHCCCCEEEEEcCCccccccccchhhhCChHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcchHHHHHHHcCCCE
Confidence 99999999999953210 01123889999998876655 5899999999999999999999999999999999999
Q ss_pred EecCCCCCcccchhhheeeceeEEEEeCC-CCCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCCCchHH
Q 012217 369 ICWPFTGDQPTNGRYVCNEWGVGMEINGD-DEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSL 445 (468)
Q Consensus 369 v~~P~~~DQ~~na~~~~~~~g~g~~~~~~-~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~ 445 (468)
|+||+++||+.||+++++++|+|+.+... .+.+++++|+++|+++|+|+ +||+||+++++++++|+++||||++
T Consensus 376 v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~e~l~~av~~vm~~~---~~r~~a~~~~~~a~~Av~~GGSS~~ 450 (451)
T PLN03004 376 VAWPLYAEQRFNRVMIVDEIKIAISMNESETGFVSSTEVEKRVQEIIGEC---PVRERTMAMKNAAELALTETGSSHT 450 (451)
T ss_pred EeccccccchhhHHHHHHHhCceEEecCCcCCccCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 99999999999999997789999999742 13679999999999999887 8999999999999999999999864
No 17
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=3.5e-67 Score=537.13 Aligned_cols=426 Identities=30% Similarity=0.514 Sum_probs=315.4
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCC-C-CCCC-CCeeEEeCC---CCCCCCCCC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQH-S-LDGL-PSFRFEAIP---DGLPASSDE 83 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~-~-~~~~-~gi~f~~l~---~~~~~~~~~ 83 (468)
++||+++|+|++||++||++||++|++||++|||++++.+..++++..... + .... -.+.+.++| +++|.+.+.
T Consensus 5 ~~hVvlvp~pa~GHi~P~L~LAk~L~~rG~~VT~vtt~~~~~~i~~~~a~~~~~~~~~~~~~~~~~~p~~~~glP~g~e~ 84 (482)
T PLN03007 5 KLHILFFPFMAHGHMIPTLDMAKLFSSRGAKSTILTTPLNAKIFEKPIEAFKNLNPGLEIDIQIFNFPCVELGLPEGCEN 84 (482)
T ss_pred CcEEEEECCCccccHHHHHHHHHHHHhCCCEEEEEECCCchhhhhhhhhhhcccCCCCcceEEEeeCCCCcCCCCCCccc
Confidence 679999999999999999999999999999999999999887766542110 0 0010 034445555 456544100
Q ss_pred CCC---c-C----CCC----C----------------------CCcccchHHHHHHHcCCCeEEEccccHHHHHHHhhhh
Q 012217 84 SPT---A-Q----DAY----S----------------------LDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQ 129 (468)
Q Consensus 84 ~~~---~-~----~~~----~----------------------~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~ 129 (468)
... . . .+. . +|.+++|+.++|+++|||+++||+++++.++.++++.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~IV~D~~~~w~~~vA~~lgIP~v~f~~~~a~~~~~~~~~~ 164 (482)
T PLN03007 85 VDFITSNNNDDSGDLFLKFLFSTKYFKDQLEKLLETTRPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFSLCASYCIR 164 (482)
T ss_pred ccccccccccchHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEECCcchhHHHHHHHhCCCeEEeecccHHHHHHHHHHH
Confidence 000 0 0 000 0 9999999999999999999999999998887766543
Q ss_pred hhhhhCCCCccccccccccccccccccccccCCCcc---CccCccCcccccCCCchhHHHHHHHHHHhcccCcEEEecch
Q 012217 130 TFKEKGLFPVKVLADKSCLTKEYLNSLIDWIPGMKD---IRIRDLPSFIQSTDPKDMMFNLCVEATENASKASAIIIHTF 206 (468)
Q Consensus 130 ~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~pg~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~ 206 (468)
........+ ... ....+|+++. ++..+++.. .....+...+....+...+++++++||+
T Consensus 165 ~~~~~~~~~-----~~~---------~~~~~pg~p~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~vl~Nt~ 226 (482)
T PLN03007 165 VHKPQKKVA-----SSS---------EPFVIPDLPGDIVITEEQINDA----DEESPMGKFMKEVRESEVKSFGVLVNSF 226 (482)
T ss_pred hcccccccC-----CCC---------ceeeCCCCCCccccCHHhcCCC----CCchhHHHHHHHHHhhcccCCEEEEECH
Confidence 211000000 000 1123666653 223333321 1122233444455566778899999999
Q ss_pred hhccHHHHHHHhhcCCCceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCcCCCHHH
Q 012217 207 DALEQQVLNALSFMFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQ 286 (468)
Q Consensus 207 ~~le~p~l~~~~~~~p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~ 286 (468)
++||++++++++......+++|||+........+. ...+.+.+..+++|.+|||++++++||||||||+...+.++
T Consensus 227 ~~le~~~~~~~~~~~~~~~~~VGPl~~~~~~~~~~----~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~ 302 (482)
T PLN03007 227 YELESAYADFYKSFVAKRAWHIGPLSLYNRGFEEK----AERGKKANIDEQECLKWLDSKKPDSVIYLSFGSVASFKNEQ 302 (482)
T ss_pred HHHHHHHHHHHHhccCCCEEEEccccccccccccc----cccCCccccchhHHHHHHhcCCCCceEEEeecCCcCCCHHH
Confidence 99999999998876654499999986532110000 00011112234679999999988999999999999888999
Q ss_pred HHHHHHHHHcCCCCEEEEEcCCCCC-CCCCCCchhHHHHhhcCc-eEecccChHHhhcCCCcceeeeccChhhHHHHHhc
Q 012217 287 LIEVAMGLVNSNHPFLWIIRPDLVT-GETADLPAEFEVKAKEKG-FVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCS 364 (468)
Q Consensus 287 ~~~~~~~l~~~~~~~lw~~~~~~~~-~~~~~~~~~~~~~~~~~~-~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~ 364 (468)
+.+++.+|+.++++|||+++..... .....+|+++.+++.+++ .+.+|+||.+||+|+++++|||||||||++||+++
T Consensus 303 ~~~~~~~l~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~ 382 (482)
T PLN03007 303 LFEIAAGLEGSGQNFIWVVRKNENQGEKEEWLPEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWNSLLEGVAA 382 (482)
T ss_pred HHHHHHHHHHCCCCEEEEEecCCcccchhhcCCHHHHHHhccCCEEEecCCCHHHHhccCccceeeecCcchHHHHHHHc
Confidence 9999999999999999999864221 112358889988875544 55589999999999999999999999999999999
Q ss_pred CCcEEecCCCCCcccchhhheeeceeEEEEeC------CCCCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhC
Q 012217 365 GVPMICWPFTGDQPTNGRYVCNEWGVGMEING------DDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAA 438 (468)
Q Consensus 365 GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~------~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~ 438 (468)
|||||+||+++||+.||+++++.+++|+.+.. +.+.+++++|+++|+++|++++|++||+||+++++.+++|+.
T Consensus 383 GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~~~r~~a~~~~~~a~~a~~ 462 (482)
T PLN03007 383 GLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVGEEAEERRLRAKKLAEMAKAAVE 462 (482)
T ss_pred CCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccccCcccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998776777776631 124689999999999999988899999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHhc
Q 012217 439 PHGSSSLNLDKLVNEILLS 457 (468)
Q Consensus 439 ~gg~s~~~~~~~~~~~~~~ 457 (468)
+||+|+.++++||+.+.+.
T Consensus 463 ~gGsS~~~l~~~v~~~~~~ 481 (482)
T PLN03007 463 EGGSSFNDLNKFMEELNSR 481 (482)
T ss_pred CCCcHHHHHHHHHHHHHhc
Confidence 9999999999999999864
No 18
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=1.4e-67 Score=531.51 Aligned_cols=393 Identities=26% Similarity=0.360 Sum_probs=304.7
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCC----CCCCCCCCCCC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIP----DGLPASSDESP 85 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l~----~~~~~~~~~~~ 85 (468)
++||++||||++||++||++||+.|+++|++|||++++.+..++.... . ..++|+|..++ +++|++ .+
T Consensus 4 ~~HVvlvPfpaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~i~~~~-~----~~~~i~~~~i~lP~~dGLP~g---~e 75 (446)
T PLN00414 4 KFHAFMYPWFGFGHMIPYLHLANKLAEKGHRVTFFLPKKAHKQLQPLN-L----FPDSIVFEPLTLPPVDGLPFG---AE 75 (446)
T ss_pred CCEEEEecCcccchHHHHHHHHHHHHhCCCEEEEEeCCchhhhhcccc-c----CCCceEEEEecCCCcCCCCCc---cc
Confidence 789999999999999999999999999999999999998877665431 0 11258885553 677665 22
Q ss_pred CcCCCCC------------------------------CCcccchHHHHHHHcCCCeEEEccccHHHHHHHhhhhhhhhhC
Q 012217 86 TAQDAYS------------------------------LDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEKG 135 (468)
Q Consensus 86 ~~~~~~~------------------------------~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~g 135 (468)
...++.. +|+ ++|+.++|+++|||++.|++++++.++.+++... ..+
T Consensus 76 ~~~~l~~~~~~~~~~a~~~l~~~l~~~L~~~~p~cVV~D~-~~wa~~vA~~lgIP~~~F~~~~a~~~~~~~~~~~--~~~ 152 (446)
T PLN00414 76 TASDLPNSTKKPIFDAMDLLRDQIEAKVRALKPDLIFFDF-VHWVPEMAKEFGIKSVNYQIISAACVAMVLAPRA--ELG 152 (446)
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECC-chhHHHHHHHhCCCEEEEecHHHHHHHHHhCcHh--hcC
Confidence 2212210 885 8999999999999999999999988887665210 000
Q ss_pred CCCccccccccccccccccccccccCCCcc----CccCcc--CcccccCCCchhHHHHHHHHHHhcccCcEEEecchhhc
Q 012217 136 LFPVKVLADKSCLTKEYLNSLIDWIPGMKD----IRIRDL--PSFIQSTDPKDMMFNLCVEATENASKASAIIIHTFDAL 209 (468)
Q Consensus 136 ~~p~~~~~~~~~~~~~~~~~~~~~~pg~~~----~~~~~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~l 209 (468)
..+||++. ++..+. +.++.. ....+.+..+...+++++++|||.+|
T Consensus 153 ----------------------~~~pg~p~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~vlvNTf~eL 204 (446)
T PLN00414 153 ----------------------FPPPDYPLSKVALRGHDANVCSLFAN------SHELFGLITKGLKNCDVVSIRTCVEL 204 (446)
T ss_pred ----------------------CCCCCCCCCcCcCchhhcccchhhcc------cHHHHHHHHHhhccCCEEEEechHHH
Confidence 01234432 111211 111110 11233444456677899999999999
Q ss_pred cHHHHHHHhhcCCCceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCcCCCHHHHHH
Q 012217 210 EQQVLNALSFMFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIE 289 (468)
Q Consensus 210 e~p~l~~~~~~~p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~ 289 (468)
|+.++++++..+++.++.|||+.+.... . . . ...+++|.+|||+++++|||||||||+..++.+++.+
T Consensus 205 E~~~~~~~~~~~~~~v~~VGPl~~~~~~--~------~---~-~~~~~~~~~WLD~q~~~sVvyvsfGS~~~~~~~q~~e 272 (446)
T PLN00414 205 EGNLCDFIERQCQRKVLLTGPMLPEPQN--K------S---G-KPLEDRWNHWLNGFEPGSVVFCAFGTQFFFEKDQFQE 272 (446)
T ss_pred HHHHHHHHHHhcCCCeEEEcccCCCccc--c------c---C-cccHHHHHHHHhcCCCCceEEEeecccccCCHHHHHH
Confidence 9999999987654349999999753210 0 0 0 1123579999999999999999999999999999999
Q ss_pred HHHHHHcCCCCEEEEEcCCCCCC-CCCCCchhHHHHhhcCceEe-cccChHHhhcCCCcceeeeccChhhHHHHHhcCCc
Q 012217 290 VAMGLVNSNHPFLWIIRPDLVTG-ETADLPAEFEVKAKEKGFVA-SWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVP 367 (468)
Q Consensus 290 ~~~~l~~~~~~~lw~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~-~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP 367 (468)
++.+|+.+|.+|+|+++.....+ ..+.+|++|.++++++++|+ +|+||.+||+|+++++|||||||||++||+++|||
T Consensus 273 ~a~gL~~s~~~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS~~Ea~~~GvP 352 (446)
T PLN00414 273 FCLGMELTGLPFLIAVMPPKGSSTVQEALPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSMWESLVSDCQ 352 (446)
T ss_pred HHHHHHHcCCCeEEEEecCCCcccchhhCChhHHHHhcCCCeEEeccCCHHHHhcCCccceEEecCchhHHHHHHHcCCC
Confidence 99999999999999998642211 13468999999999999987 79999999999999999999999999999999999
Q ss_pred EEecCCCCCcccchhhheeeceeEEEEeCC-CCCcchhHHHHHHHHHhcC--chHHHHHHHHHHHHHHHHHHhCCCCchH
Q 012217 368 MICWPFTGDQPTNGRYVCNEWGVGMEINGD-DEDVIRNEVEKLVREMMEG--EKGKQMRNKAMEWKGLAEEAAAPHGSSS 444 (468)
Q Consensus 368 ~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~-~~~~~~~~l~~av~~~l~~--~~~~~~~~~a~~l~~~~~~a~~~gg~s~ 444 (468)
+|+||+++||+.||+++++++|+|+.+..+ ++.+++++|+++|+++|++ ++|++||++|+++++.+. ++||+|
T Consensus 353 ~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~~---~~gg~s- 428 (446)
T PLN00414 353 IVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETLV---SPGLLS- 428 (446)
T ss_pred EEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHHH---cCCCcH-
Confidence 999999999999999997789999999642 1358999999999999976 357889999999999964 467744
Q ss_pred HHHHHHHHHHHhc
Q 012217 445 LNLDKLVNEILLS 457 (468)
Q Consensus 445 ~~~~~~~~~~~~~ 457 (468)
..+++||+++++.
T Consensus 429 s~l~~~v~~~~~~ 441 (446)
T PLN00414 429 GYADKFVEALENE 441 (446)
T ss_pred HHHHHHHHHHHHh
Confidence 3489999999664
No 19
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=9.7e-68 Score=532.02 Aligned_cols=393 Identities=26% Similarity=0.405 Sum_probs=304.0
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeC--C--CCCCCCCCCCC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAI--P--DGLPASSDESP 85 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l--~--~~~~~~~~~~~ 85 (468)
++||++||||++||++|+++||+.|++|||+|||+|++.+..++.+. +. . ..+++|..+ + +++|++ .+
T Consensus 4 ~~hvv~~P~paqGHi~P~l~LAk~La~~G~~VT~vtt~~~~~~i~~~-~a--~--~~~i~~~~l~~p~~dgLp~g---~~ 75 (442)
T PLN02208 4 KFHAFMFPWFAFGHMIPFLHLANKLAEKGHRVTFLLPKKAQKQLEHH-NL--F--PDSIVFHPLTIPPVNGLPAG---AE 75 (442)
T ss_pred CCEEEEecCccccHHHHHHHHHHHHHhCCCEEEEEeccchhhhhhcc-cC--C--CCceEEEEeCCCCccCCCCC---cc
Confidence 78999999999999999999999999999999999999887776543 11 0 114666654 3 566655 22
Q ss_pred CcCCCCC------------------------------CCcccchHHHHHHHcCCCeEEEccccHHHHHHHhhhhhhhhhC
Q 012217 86 TAQDAYS------------------------------LDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEKG 135 (468)
Q Consensus 86 ~~~~~~~------------------------------~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~g 135 (468)
...++.. +| +++|+.++|+++|||++.|++++++.++ +++++. +
T Consensus 76 ~~~~l~~~l~~~~~~~~~~~~~~l~~~L~~~~~~cVV~D-~~~wa~~vA~e~giP~~~f~~~~a~~~~-~~~~~~----~ 149 (442)
T PLN02208 76 TTSDIPISMDNLLSEALDLTRDQVEAAVRALRPDLIFFD-FAQWIPEMAKEHMIKSVSYIIVSATTIA-HTHVPG----G 149 (442)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEC-CcHhHHHHHHHhCCCEEEEEhhhHHHHH-HHccCc----c
Confidence 1111110 89 5799999999999999999999988654 333321 0
Q ss_pred CCCccccccccccccccccccccccCCCcc----CccCccCcccccCCCchhHHHHHH-HHHHhcccCcEEEecchhhcc
Q 012217 136 LFPVKVLADKSCLTKEYLNSLIDWIPGMKD----IRIRDLPSFIQSTDPKDMMFNLCV-EATENASKASAIIIHTFDALE 210 (468)
Q Consensus 136 ~~p~~~~~~~~~~~~~~~~~~~~~~pg~~~----~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~nt~~~le 210 (468)
.. ...+||++. ++..+++.+ . ........+. +..+...+++++++|||.+||
T Consensus 150 ~~-------------------~~~~pglp~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE 206 (442)
T PLN02208 150 KL-------------------GVPPPGYPSSKVLFRENDAHAL-A---TLSIFYKRLYHQITTGLKSCDVIALRTCKEIE 206 (442)
T ss_pred cc-------------------CCCCCCCCCcccccCHHHcCcc-c---ccchHHHHHHHHHHhhhccCCEEEEECHHHHH
Confidence 00 011456653 344555532 1 1112222222 333455678999999999999
Q ss_pred HHHHHHHhhcCCCceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCcCCCHHHHHHH
Q 012217 211 QQVLNALSFMFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIEV 290 (468)
Q Consensus 211 ~p~l~~~~~~~p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~ 290 (468)
+.++++++..+.++++.|||++..... + ...+++|.+|||++++++||||||||+..++.+++.++
T Consensus 207 ~~~~~~~~~~~~~~v~~vGpl~~~~~~--~------------~~~~~~~~~wLd~~~~~sVvyvSfGS~~~l~~~q~~e~ 272 (442)
T PLN02208 207 GKFCDYISRQYHKKVLLTGPMFPEPDT--S------------KPLEEQWSHFLSGFPPKSVVFCSLGSQIILEKDQFQEL 272 (442)
T ss_pred HHHHHHHHhhcCCCEEEEeecccCcCC--C------------CCCHHHHHHHHhcCCCCcEEEEeccccccCCHHHHHHH
Confidence 999999987553349999999863210 0 01346899999999889999999999999999999999
Q ss_pred HHHHHcCCCCEEEEEcCCCCC-CCCCCCchhHHHHhhcCceEe-cccChHHhhcCCCcceeeeccChhhHHHHHhcCCcE
Q 012217 291 AMGLVNSNHPFLWIIRPDLVT-GETADLPAEFEVKAKEKGFVA-SWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPM 368 (468)
Q Consensus 291 ~~~l~~~~~~~lw~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~-~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP~ 368 (468)
+.+|+.++.+|+|+++.+... .....+|++|.+++.++++++ +|+||.+||+|++||+|||||||||++||+++||||
T Consensus 273 ~~~l~~s~~pf~wv~r~~~~~~~~~~~lp~~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS~~Eai~~GVP~ 352 (442)
T PLN02208 273 CLGMELTGLPFLIAVKPPRGSSTVQEGLPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGTIWESLVSDCQM 352 (442)
T ss_pred HHHHHhCCCcEEEEEeCCCcccchhhhCCHHHHHHHhcCCcEeeccCCHHHHhcCCccCeEEccCCchHHHHHHHcCCCE
Confidence 999999999999999864211 112358899999987766665 899999999999999999999999999999999999
Q ss_pred EecCCCCCcccchhhheeeceeEEEEeCCC-CCcchhHHHHHHHHHhcCc--hHHHHHHHHHHHHHHHHHHhCCCCchHH
Q 012217 369 ICWPFTGDQPTNGRYVCNEWGVGMEINGDD-EDVIRNEVEKLVREMMEGE--KGKQMRNKAMEWKGLAEEAAAPHGSSSL 445 (468)
Q Consensus 369 v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~-~~~~~~~l~~av~~~l~~~--~~~~~~~~a~~l~~~~~~a~~~gg~s~~ 445 (468)
|+||+++||+.||+++++++|+|+.+...+ +.+++++|+++|+++|+++ +|+++|+||+++++.+. ++|+|+.
T Consensus 353 l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~----~~gsS~~ 428 (442)
T PLN02208 353 VLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILV----SPGLLTG 428 (442)
T ss_pred EecCcchhhHHHHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHh----cCCcHHH
Confidence 999999999999999877799999996421 3499999999999999764 58899999999999975 3789999
Q ss_pred HHHHHHHHHHhc
Q 012217 446 NLDKLVNEILLS 457 (468)
Q Consensus 446 ~~~~~~~~~~~~ 457 (468)
++++||+++++.
T Consensus 429 ~l~~~v~~l~~~ 440 (442)
T PLN02208 429 YVDKFVEELQEY 440 (442)
T ss_pred HHHHHHHHHHHh
Confidence 999999999653
No 20
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=1.7e-67 Score=536.78 Aligned_cols=416 Identities=32% Similarity=0.595 Sum_probs=324.4
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCCCCCCCCCC-CC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHK--GFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGLPASSDES-PT 86 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~r--Gh~Vt~~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l~~~~~~~~~~~-~~ 86 (468)
++||+++|+|++||++||++||++|++| ||+|||++++.+..++++... .++++|+.+|++++...... ..
T Consensus 10 ~~hVvlvp~pa~GHi~P~l~LA~~L~~~~~G~~VT~~~t~~~~~~i~~~~~------~~gi~fv~lp~~~p~~~~~~~~~ 83 (459)
T PLN02448 10 SCHVVAMPYPGRGHINPMMNLCKLLASRKPDILITFVVTEEWLGLIGSDPK------PDNIRFATIPNVIPSELVRAADF 83 (459)
T ss_pred CcEEEEECCcccccHHHHHHHHHHHHcCCCCcEEEEEeCCchHhHhhccCC------CCCEEEEECCCCCCCccccccCH
Confidence 7899999999999999999999999999 999999999998887766421 13799999998665441000 00
Q ss_pred ------------------cCCC--C-C---CCcccchHHHHHHHcCCCeEEEccccHHHHHHHhhhhhhhhhCCCCcccc
Q 012217 87 ------------------AQDA--Y-S---LDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEKGLFPVKVL 142 (468)
Q Consensus 87 ------------------~~~~--~-~---~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~ 142 (468)
...+ . . +|++++|+..+|+++|||++.|+++++..++.+.+++.+...+..|....
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 163 (459)
T PLN02448 84 PGFLEAVMTKMEAPFEQLLDRLEPPVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNGHFPVELS 163 (459)
T ss_pred HHHHHHHHHHhHHHHHHHHHhcCCCcEEEEECCccHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHhhhhhhccCCCCccc
Confidence 0000 0 0 89999999999999999999999999988887777654322222222100
Q ss_pred ccccccccccccccccccCCCccCccCccCcccccCCCchhHHHHHHHHHHhcccCcEEEecchhhccHHHHHHHhhcCC
Q 012217 143 ADKSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEATENASKASAIIIHTFDALEQQVLNALSFMFP 222 (468)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~p~l~~~~~~~p 222 (468)
... +....++||++.++..+++.+.... .....+.+........+++.+++|||++||+.++++++..++
T Consensus 164 -~~~-------~~~~~~iPg~~~l~~~dlp~~~~~~--~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~ 233 (459)
T PLN02448 164 -ESG-------EERVDYIPGLSSTRLSDLPPIFHGN--SRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKSKFP 233 (459)
T ss_pred -ccc-------CCccccCCCCCCCChHHCchhhcCC--chHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHHHHHhhcC
Confidence 000 0022358888877777787655421 223334444555556678899999999999999999988766
Q ss_pred CceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCcCCCHHHHHHHHHHHHcCCCCEE
Q 012217 223 HHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFL 302 (468)
Q Consensus 223 ~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~l 302 (468)
.+++.|||+.+.... .+. .........+.+|.+||++++++++|||||||+...+.+++.+++++|+.++++||
T Consensus 234 ~~~~~iGP~~~~~~~-~~~-----~~~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~l 307 (459)
T PLN02448 234 FPVYPIGPSIPYMEL-KDN-----SSSSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFL 307 (459)
T ss_pred CceEEecCccccccc-CCC-----ccccccccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEE
Confidence 449999999753110 000 00000011234799999999889999999999988889999999999999999999
Q ss_pred EEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCCCcccchh
Q 012217 303 WIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGR 382 (468)
Q Consensus 303 w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~ 382 (468)
|+++.. ..++.++.++|+++++|+||.+||+|+++++|||||||||++||+++|||||+||+++||+.||+
T Consensus 308 w~~~~~---------~~~~~~~~~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P~~~DQ~~na~ 378 (459)
T PLN02448 308 WVARGE---------ASRLKEICGDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFPLFWDQPLNSK 378 (459)
T ss_pred EEEcCc---------hhhHhHhccCCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEeccccccchhhHH
Confidence 998743 12455555678999999999999999999999999999999999999999999999999999999
Q ss_pred hheeeceeEEEEeCC---CCCcchhHHHHHHHHHhcC--chHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHh
Q 012217 383 YVCNEWGVGMEINGD---DEDVIRNEVEKLVREMMEG--EKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEILL 456 (468)
Q Consensus 383 ~~~~~~g~g~~~~~~---~~~~~~~~l~~av~~~l~~--~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~~~~~~ 456 (468)
+++++||+|+.+... .+.+++++|+++|+++|.+ ++|++||+||+++++++++++.+||||+.++++|++++++
T Consensus 379 ~v~~~~g~G~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~~gGss~~~l~~~v~~~~~ 457 (459)
T PLN02448 379 LIVEDWKIGWRVKREVGEETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKGGSSDTNLDAFIRDISQ 457 (459)
T ss_pred HHHHHhCceEEEecccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHhc
Confidence 997778999998631 1367999999999999986 4688999999999999999999999999999999999975
No 21
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=8.8e-67 Score=532.71 Aligned_cols=422 Identities=27% Similarity=0.454 Sum_probs=316.1
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCC---EEEEEeCCcchH-HHHhhhcCCCCCCCCCeeEEeCCCCC-CCCCC--
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGF---HITFVNTEFNHR-RLLKARGQHSLDGLPSFRFEAIPDGL-PASSD-- 82 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh---~Vt~~t~~~~~~-~~~~~~~~~~~~~~~gi~f~~l~~~~-~~~~~-- 82 (468)
++||++||||++||++||++||+.|+.+|. .||+++++.+.. ......... ....++|+|+.+|++. +...+
T Consensus 3 ~~hVv~~PfpaqGHi~P~l~LAk~La~~G~~~t~vt~~~t~~~~~~~~~~~~~~~-~~~~~~i~~~~lp~~~~p~~~~~~ 81 (475)
T PLN02167 3 EAELIFVPFPSTGHILVTIEFAKRLINLDRRIHTITILYWSLPFAPQADAFLKSL-IASEPRIRLVTLPEVQDPPPMELF 81 (475)
T ss_pred ccEEEEeCChhhhhHHHHHHHHHHHHhCCCCeEEEEEEECCCCcchhhhHHHhhc-ccCCCCeEEEECCCCCCCcccccc
Confidence 679999999999999999999999999984 567777653321 111111000 1112369999998643 11100
Q ss_pred --CC-------------------CC-cC------CCC--C--CCcccchHHHHHHHcCCCeEEEccccHHHHHHHhhhhh
Q 012217 83 --ES-------------------PT-AQ------DAY--S--LDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQT 130 (468)
Q Consensus 83 --~~-------------------~~-~~------~~~--~--~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~ 130 (468)
+. +. .. ..+ . +|+|++|+.++|+++|||+++|++++++.++.+++++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~pv~cvV~D~f~~Wa~dVA~elgIP~v~F~t~~A~~~~~~~~~~~ 161 (475)
T PLN02167 82 VKASEAYILEFVKKMVPLVRDALSTLVSSRDESDSVRVAGLVLDFFCVPLIDVGNEFNLPSYIFLTCNAGFLGMMKYLPE 161 (475)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCeEEEEECCccHHHHHHHHHhCCCEEEEECccHHHHHHHHHHHH
Confidence 00 00 00 001 1 89999999999999999999999999999888777653
Q ss_pred hhhhCCCCccccccccccccccccccccccCCCc-cCccCccCcccccCCCchhHHHHHHHHHHhcccCcEEEecchhhc
Q 012217 131 FKEKGLFPVKVLADKSCLTKEYLNSLIDWIPGMK-DIRIRDLPSFIQSTDPKDMMFNLCVEATENASKASAIIIHTFDAL 209 (468)
Q Consensus 131 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~pg~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~l 209 (468)
. .+..+... ... . .+ ....+||++ .++..+++.+..... ..+.+....+...+++++|+|||++|
T Consensus 162 ~--~~~~~~~~--~~~---~--~~-~~~~iPgl~~~l~~~dlp~~~~~~~----~~~~~~~~~~~~~~a~~vlvNTf~eL 227 (475)
T PLN02167 162 R--HRKTASEF--DLS---S--GE-EELPIPGFVNSVPTKVLPPGLFMKE----SYEAWVEIAERFPEAKGILVNSFTEL 227 (475)
T ss_pred h--cccccccc--ccC---C--CC-CeeECCCCCCCCChhhCchhhhCcc----hHHHHHHHHHhhcccCEeeeccHHHH
Confidence 2 11111000 000 0 00 123488884 577777775443211 12233344455677899999999999
Q ss_pred cHHHHHHHhhc---CCCceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCcCCCHHH
Q 012217 210 EQQVLNALSFM---FPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQ 286 (468)
Q Consensus 210 e~p~l~~~~~~---~p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~ 286 (468)
|+.++++++.. +|+ +++|||+++...... . ..+ ...+++|.+|||++++++||||||||+..++.++
T Consensus 228 E~~~~~~l~~~~~~~p~-v~~vGpl~~~~~~~~-~-----~~~---~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~ 297 (475)
T PLN02167 228 EPNAFDYFSRLPENYPP-VYPVGPILSLKDRTS-P-----NLD---SSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQ 297 (475)
T ss_pred HHHHHHHHHhhcccCCe-eEEeccccccccccC-C-----CCC---cchhHHHHHHHhcCCCCceEEEeecccccCCHHH
Confidence 99999998754 566 999999986321100 0 000 1133579999999988999999999999899999
Q ss_pred HHHHHHHHHcCCCCEEEEEcCCCCC--CCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHHHhc
Q 012217 287 LIEVAMGLVNSNHPFLWIIRPDLVT--GETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCS 364 (468)
Q Consensus 287 ~~~~~~~l~~~~~~~lw~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~ 364 (468)
+.+++.+|+.++++|||+++.+... .....+|++|.+++.+++++++|+||.+||+|+++|+|||||||||++||+++
T Consensus 298 ~~ela~~l~~~~~~flw~~~~~~~~~~~~~~~lp~~~~er~~~rg~v~~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~ 377 (475)
T PLN02167 298 IKEIAQALELVGCRFLWSIRTNPAEYASPYEPLPEGFMDRVMGRGLVCGWAPQVEILAHKAIGGFVSHCGWNSVLESLWF 377 (475)
T ss_pred HHHHHHHHHhCCCcEEEEEecCcccccchhhhCChHHHHHhccCeeeeccCCHHHHhcCcccCeEEeeCCcccHHHHHHc
Confidence 9999999999999999999853211 11235889999999999999999999999999999999999999999999999
Q ss_pred CCcEEecCCCCCcccchhhheeeceeEEEEeCC-----CCCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCC
Q 012217 365 GVPMICWPFTGDQPTNGRYVCNEWGVGMEINGD-----DEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAP 439 (468)
Q Consensus 365 GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~-----~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~ 439 (468)
|||||+||+++||+.||+++++++|+|+.+... .+.+++++|+++|+++|.++ ++||+||+++++++++++++
T Consensus 378 GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~--~~~r~~a~~~~~~~~~av~~ 455 (475)
T PLN02167 378 GVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDGE--DVPRKKVKEIAEAARKAVMD 455 (475)
T ss_pred CCCEEeccccccchhhHHHHHHHhCeeEEeecccccccCCcccHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999998765899999998631 13579999999999999754 27999999999999999999
Q ss_pred CCchHHHHHHHHHHHHhcC
Q 012217 440 HGSSSLNLDKLVNEILLSN 458 (468)
Q Consensus 440 gg~s~~~~~~~~~~~~~~~ 458 (468)
||+|+.++++||++++..+
T Consensus 456 gGsS~~~l~~~v~~i~~~~ 474 (475)
T PLN02167 456 GGSSFVAVKRFIDDLLGDH 474 (475)
T ss_pred CCcHHHHHHHHHHHHHhcC
Confidence 9999999999999998754
No 22
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=2.7e-48 Score=403.95 Aligned_cols=201 Identities=30% Similarity=0.553 Sum_probs=158.1
Q ss_pred ccCcEEEecchhhccHHHHHHHhhcCCCceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEe
Q 012217 196 SKASAIIIHTFDALEQQVLNALSFMFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVN 275 (468)
Q Consensus 196 ~~~~~~l~nt~~~le~p~l~~~~~~~p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs 275 (468)
.+.+.+++|+.+.++.| |+..|+ +++||+++....+ ..++++.+|+++..++++||||
T Consensus 225 ~~~~l~l~ns~~~ld~p-----rp~~p~-v~~vGgl~~~~~~----------------~l~~~~~~~~~~~~~~~vv~vs 282 (500)
T PF00201_consen 225 SNASLVLINSHPSLDFP-----RPLLPN-VVEVGGLHIKPAK----------------PLPEELWNFLDSSGKKGVVYVS 282 (500)
T ss_dssp HHHHHCCSSTEEE---------HHHHCT-STTGCGC-S--------------------TCHHHHHHHTSTTTTTEEEEEE
T ss_pred HHHHHHhhhccccCcCC-----cchhhc-ccccCcccccccc----------------ccccccchhhhccCCCCEEEEe
Confidence 44567888998888777 787787 9999999874321 1345788999985577899999
Q ss_pred ecCCcCCC-HHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccC
Q 012217 276 FGSFIFMN-KQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCG 354 (468)
Q Consensus 276 ~GS~~~~~-~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG 354 (468)
|||+.... .+..+++++++++.+++|||+++.. .+. .+++|+++++|+||.+||.||++++||||||
T Consensus 283 fGs~~~~~~~~~~~~~~~~~~~~~~~~iW~~~~~--------~~~----~l~~n~~~~~W~PQ~~lL~hp~v~~fitHgG 350 (500)
T PF00201_consen 283 FGSIVSSMPEEKLKEIAEAFENLPQRFIWKYEGE--------PPE----NLPKNVLIVKWLPQNDLLAHPRVKLFITHGG 350 (500)
T ss_dssp -TSSSTT-HHHHHHHHHHHHHCSTTEEEEEETCS--------HGC----HHHTTEEEESS--HHHHHTSTTEEEEEES--
T ss_pred cCcccchhHHHHHHHHHHHHhhCCCccccccccc--------ccc----cccceEEEeccccchhhhhcccceeeeeccc
Confidence 99997544 4558899999999999999999853 111 2368999999999999999999999999999
Q ss_pred hhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Q 012217 355 WNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAE 434 (468)
Q Consensus 355 ~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~ 434 (468)
+||++||+++|||+|++|+++||+.||+++ ++.|+|+.++. ..++.++|.++|+++|+|+ +|++||+++++.++
T Consensus 351 ~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~-~~~G~g~~l~~--~~~~~~~l~~ai~~vl~~~---~y~~~a~~ls~~~~ 424 (500)
T PF00201_consen 351 LNSTQEALYHGVPMLGIPLFGDQPRNAARV-EEKGVGVVLDK--NDLTEEELRAAIREVLENP---SYKENAKRLSSLFR 424 (500)
T ss_dssp HHHHHHHHHCT--EEE-GCSTTHHHHHHHH-HHTTSEEEEGG--GC-SHHHHHHHHHHHHHSH---HHHHHHHHHHHTTT
T ss_pred cchhhhhhhccCCccCCCCcccCCccceEE-EEEeeEEEEEe--cCCcHHHHHHHHHHHHhhh---HHHHHHHHHHHHHh
Confidence 999999999999999999999999999999 67799999986 7899999999999999999 99999999999998
Q ss_pred HH
Q 012217 435 EA 436 (468)
Q Consensus 435 ~a 436 (468)
..
T Consensus 425 ~~ 426 (500)
T PF00201_consen 425 DR 426 (500)
T ss_dssp --
T ss_pred cC
Confidence 63
No 23
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=6.6e-45 Score=373.44 Aligned_cols=226 Identities=20% Similarity=0.301 Sum_probs=186.6
Q ss_pred HHhcccCcEEEecchhhccHHHHHHHhhcCCCceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCce
Q 012217 192 TENASKASAIIIHTFDALEQQVLNALSFMFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSV 271 (468)
Q Consensus 192 ~~~~~~~~~~l~nt~~~le~p~l~~~~~~~p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~v 271 (468)
.+...+.+++|+|+.+.++++ |+..|+ +++|||++.+... . ...++++.+|++++ ++++
T Consensus 240 ~~l~~~~~l~lvns~~~~d~~-----rp~~p~-v~~vGgi~~~~~~-~-------------~~l~~~l~~fl~~~-~~g~ 298 (507)
T PHA03392 240 RELRNRVQLLFVNVHPVFDNN-----RPVPPS-VQYLGGLHLHKKP-P-------------QPLDDYLEEFLNNS-TNGV 298 (507)
T ss_pred HHHHhCCcEEEEecCccccCC-----CCCCCC-eeeecccccCCCC-C-------------CCCCHHHHHHHhcC-CCcE
Confidence 345567789999999999988 765555 9999999874211 0 11456889999986 4589
Q ss_pred EEEeecCCc---CCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcce
Q 012217 272 IYVNFGSFI---FMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGG 348 (468)
Q Consensus 272 v~vs~GS~~---~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~ 348 (468)
|||||||+. ..+.+.+..+++++++.+.+|||+++... . + ...++|+++++|+||.+||+|+.+++
T Consensus 299 V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~~~viw~~~~~~-------~-~---~~~p~Nv~i~~w~Pq~~lL~hp~v~~ 367 (507)
T PHA03392 299 VYVSFGSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGEV-------E-A---INLPANVLTQKWFPQRAVLKHKNVKA 367 (507)
T ss_pred EEEECCCCCcCCCCCHHHHHHHHHHHHhCCCeEEEEECCCc-------C-c---ccCCCceEEecCCCHHHHhcCCCCCE
Confidence 999999985 35678999999999999999999998541 1 1 12368999999999999999999999
Q ss_pred eeeccChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCchHHHHHHHHHH
Q 012217 349 FLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAME 428 (468)
Q Consensus 349 ~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~ 428 (468)
||||||+||++||+++|||+|++|+++||+.||+++ +++|+|+.++. ..+++++|.++|+++|+|+ +|++||++
T Consensus 368 fItHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv-~~~G~G~~l~~--~~~t~~~l~~ai~~vl~~~---~y~~~a~~ 441 (507)
T PHA03392 368 FVTQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKY-VELGIGRALDT--VTVSAAQLVLAIVDVIENP---KYRKNLKE 441 (507)
T ss_pred EEecCCcccHHHHHHcCCCEEECCCCccHHHHHHHH-HHcCcEEEecc--CCcCHHHHHHHHHHHhCCH---HHHHHHHH
Confidence 999999999999999999999999999999999999 67899999986 6889999999999999998 99999999
Q ss_pred HHHHHHHHhCCCCchHHHHHHHHHHHHhcC
Q 012217 429 WKGLAEEAAAPHGSSSLNLDKLVNEILLSN 458 (468)
Q Consensus 429 l~~~~~~a~~~gg~s~~~~~~~~~~~~~~~ 458 (468)
+++.+++. .-+..+.....++.+.+..
T Consensus 442 ls~~~~~~---p~~~~~~av~~iE~v~r~~ 468 (507)
T PHA03392 442 LRHLIRHQ---PMTPLHKAIWYTEHVIRNK 468 (507)
T ss_pred HHHHHHhC---CCCHHHHHHHHHHHHHhCC
Confidence 99999973 2223344445566665554
No 24
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=100.00 E-value=9.6e-42 Score=354.74 Aligned_cols=380 Identities=30% Similarity=0.500 Sum_probs=240.1
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCC--CCCCCeeEEeCCCCCCCCCCCCCCc
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSL--DGLPSFRFEAIPDGLPASSDESPTA 87 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~--~~~~gi~f~~l~~~~~~~~~~~~~~ 87 (468)
+.|++++++|++||++|++.||++|+++||+||++++..+............. .....+.+...+++++.. .+..
T Consensus 5 ~~~~il~~~p~~sH~~~~~~la~~L~~~gh~vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 81 (496)
T KOG1192|consen 5 KAHNILVPFPGQSHLNPMLQLAKRLAERGHNVTVVTPSFNALKLSKSSKSKSIKKINPPPFEFLTIPDGLPEG---WEDD 81 (496)
T ss_pred cceeEEEECCcccHHHHHHHHHHHHHHcCCceEEEEeechhcccCCcccceeeeeeecChHHhhhhhhhhccc---hHHH
Confidence 57999999999999999999999999999999999998765533221000000 000012222222223222 1000
Q ss_pred -----------------------------CC--CCC--CCcccchHHHHHHHcC-CCeEEEccccHHHHHHHhhhhhhhh
Q 012217 88 -----------------------------QD--AYS--LDGFLPFTITAAQQLG-LPIVLFFTISACSFMGFKQFQTFKE 133 (468)
Q Consensus 88 -----------------------------~~--~~~--~D~~~~~~~~vA~~lg-IP~v~~~~~~~~~~~~~~~~~~~~~ 133 (468)
.. ... +|.+..|...+|...+ ++...+++.++.........+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~~~--- 158 (496)
T KOG1192|consen 82 DLDISESLLELNKTCEDLLRDPLEKLLLLKSEKFDLIISDPFLGLFLLLAIPSFVIPLLSFPTSSAVLLALGLPSPL--- 158 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHhhcCCccEEEechhhHHHHHhcccceEEEeecccCchHHHHhcCCcCcc---
Confidence 00 000 7777778887887775 8888888777666554332221
Q ss_pred hCCCCccccccccccccccccccccccCCCccCccCccCcccccCCCchhHHHHH-----------HHHHHhcccCcEEE
Q 012217 134 KGLFPVKVLADKSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLC-----------VEATENASKASAII 202 (468)
Q Consensus 134 ~g~~p~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~l 202 (468)
.+.|... .....+ .+.......++....++................ ....+...+++..+
T Consensus 159 -~~~p~~~---~~~~~~-----~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 229 (496)
T KOG1192|consen 159 -SYVPSPF---SLSSGD-----DMSFPERVPNLIKKDLPSFLFSLSDDRKQDKISKELLGDILNWKPTASGIIVNASFIF 229 (496)
T ss_pred -cccCccc---Cccccc-----cCcHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCCcccccccHHHhhhcCeEEE
Confidence 1232220 000000 000000011111111111111000000000000 01113344555666
Q ss_pred ecchhhccHHHHHHHhhcCCCceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCC--ceEEEeecCCc
Q 012217 203 IHTFDALEQQVLNALSFMFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPK--SVIYVNFGSFI 280 (468)
Q Consensus 203 ~nt~~~le~p~l~~~~~~~p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~--~vv~vs~GS~~ 280 (468)
+|+...++.+ .++..|+ +++|||++...... ....+.+|+|..+.. ++|||||||+.
T Consensus 230 ln~~~~~~~~----~~~~~~~-v~~IG~l~~~~~~~----------------~~~~~~~wl~~~~~~~~~vvyvSfGS~~ 288 (496)
T KOG1192|consen 230 LNSNPLLDFE----PRPLLPK-VIPIGPLHVKDSKQ----------------KSPLPLEWLDILDESRHSVVYISFGSMV 288 (496)
T ss_pred EccCcccCCC----CCCCCCC-ceEECcEEecCccc----------------cccccHHHHHHHhhccCCeEEEECCccc
Confidence 6666555441 1233455 99999999852110 011456788876554 89999999998
Q ss_pred ---CCCHHHHHHHHHHHHcC-CCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHh-hcCCCcceeeeccCh
Q 012217 281 ---FMNKQQLIEVAMGLVNS-NHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEV-LKHPSIGGFLTHCGW 355 (468)
Q Consensus 281 ---~~~~~~~~~~~~~l~~~-~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~i-l~~~~~~~~v~hgG~ 355 (468)
.++.++..+++.+++.+ +..|+|+++.... ..+++++.++.++|+...+|+||.++ |.|+++|+|||||||
T Consensus 289 ~~~~lp~~~~~~l~~~l~~~~~~~FiW~~~~~~~----~~~~~~~~~~~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~ 364 (496)
T KOG1192|consen 289 NSADLPEEQKKELAKALESLQGVTFLWKYRPDDS----IYFPEGLPNRGRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGW 364 (496)
T ss_pred ccccCCHHHHHHHHHHHHhCCCceEEEEecCCcc----hhhhhcCCCCCcCceEEecCCCcHHHhcCCCcCcEEEECCcc
Confidence 78999999999999999 8899999996521 11223332212357888899999998 599999999999999
Q ss_pred hhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Q 012217 356 NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEE 435 (468)
Q Consensus 356 ~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~ 435 (468)
|||+|++++|||+|++|+++||+.||+++++++++++... ...+.+.+..++.++++++ +|+++|+++++.+++
T Consensus 365 nSt~E~~~~GvP~v~~Plf~DQ~~Na~~i~~~g~~~v~~~---~~~~~~~~~~~~~~il~~~---~y~~~~~~l~~~~~~ 438 (496)
T KOG1192|consen 365 NSTLESIYSGVPMVCVPLFGDQPLNARLLVRHGGGGVLDK---RDLVSEELLEAIKEILENE---EYKEAAKRLSEILRD 438 (496)
T ss_pred cHHHHHHhcCCceecCCccccchhHHHHHHhCCCEEEEeh---hhcCcHHHHHHHHHHHcCh---HHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999977877777776 3555555999999999999 999999999999885
No 25
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=100.00 E-value=1.1e-39 Score=329.03 Aligned_cols=336 Identities=20% Similarity=0.285 Sum_probs=232.6
Q ss_pred EcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCCCCCCCCCCCCc--CCC---
Q 012217 16 IPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGLPASSDESPTA--QDA--- 90 (468)
Q Consensus 16 ~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l~~~~~~~~~~~~~~--~~~--- 90 (468)
+.+|+.||++|++.||++|++|||+|+|++++.+.+.+++. |+.|.++++.+.... ..+.. ...
T Consensus 1 ~~~p~~Ghv~P~l~lA~~L~~~Gh~V~~~~~~~~~~~v~~~----------G~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 69 (392)
T TIGR01426 1 FNIPAHGHVNPTLGVVEELVARGHRVTYATTEEFAERVEAA----------GAEFVLYGSALPPPD-NPPENTEEEPIDI 69 (392)
T ss_pred CCCCccccccccHHHHHHHHhCCCeEEEEeCHHHHHHHHHc----------CCEEEecCCcCcccc-ccccccCcchHHH
Confidence 35799999999999999999999999999999999998887 899988876443210 00000 000
Q ss_pred ----------------------C-C---CCcccchHHHHHHHcCCCeEEEccccHHHHHHHhhhhhhhhhCCCCcccccc
Q 012217 91 ----------------------Y-S---LDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEKGLFPVKVLAD 144 (468)
Q Consensus 91 ----------------------~-~---~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~ 144 (468)
. . +|.+.+|+..+|+++|||+|.+++..... ..++.. ..|..
T Consensus 70 ~~~~~~~~~~~~~~l~~~~~~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~----~~~~~~----~~~~~---- 137 (392)
T TIGR01426 70 IEKLLDEAEDVLPQLEEAYKGDRPDLIVYDIASWTGRLLARKWDVPVISSFPTFAAN----EEFEEM----VSPAG---- 137 (392)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHhCCCEEEEehhhccc----cccccc----ccccc----
Confidence 0 0 77777899999999999999885432110 000000 00100
Q ss_pred ccccccccccccccccCCCccCccCccCcccccCCCchhHHHHHHHHH------Hh--cccCcEEEecchhhccHHHHHH
Q 012217 145 KSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEAT------EN--ASKASAIIIHTFDALEQQVLNA 216 (468)
Q Consensus 145 ~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~------~~--~~~~~~~l~nt~~~le~p~l~~ 216 (468)
+++... ......... ...+...+...+.. .. ....+..+..+.+.|+++
T Consensus 138 ----------------~~~~~~-~~~~~~~~~--~~~~~~~~~r~~~gl~~~~~~~~~~~~~~~~l~~~~~~l~~~---- 194 (392)
T TIGR01426 138 ----------------EGSAEE-GAIAERGLA--EYVARLSALLEEHGITTPPVEFLAAPRRDLNLVYTPKAFQPA---- 194 (392)
T ss_pred ----------------hhhhhh-hccccchhH--HHHHHHHHHHHHhCCCCCCHHHHhcCCcCcEEEeCChHhCCC----
Confidence 000000 000000000 00000111110000 00 112223455555455443
Q ss_pred HhhcCCCceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCcCCCHHHHHHHHHHHHc
Q 012217 217 LSFMFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIEVAMGLVN 296 (468)
Q Consensus 217 ~~~~~p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~ 296 (468)
+..||++++++||+..... +...|++..+.+++||||+||+.....+.+.++++++.+
T Consensus 195 -~~~~~~~~~~~Gp~~~~~~---------------------~~~~~~~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~al~~ 252 (392)
T TIGR01426 195 -GETFDDSFTFVGPCIGDRK---------------------EDGSWERPGDGRPVVLISLGTVFNNQPSFYRTCVEAFRD 252 (392)
T ss_pred -ccccCCCeEEECCCCCCcc---------------------ccCCCCCCCCCCCEEEEecCccCCCCHHHHHHHHHHHhc
Confidence 5678888999999875311 112466665677899999999876667788899999999
Q ss_pred CCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCCC
Q 012217 297 SNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGD 376 (468)
Q Consensus 297 ~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~D 376 (468)
.+.+++|..+.... ...+ ...++|+.+.+|+||.++|+|+++ ||||||+||++||+++|+|+|++|...|
T Consensus 253 ~~~~~i~~~g~~~~-------~~~~-~~~~~~v~~~~~~p~~~ll~~~~~--~I~hgG~~t~~Eal~~G~P~v~~p~~~d 322 (392)
T TIGR01426 253 LDWHVVLSVGRGVD-------PADL-GELPPNVEVRQWVPQLEILKKADA--FITHGGMNSTMEALFNGVPMVAVPQGAD 322 (392)
T ss_pred CCCeEEEEECCCCC-------hhHh-ccCCCCeEEeCCCCHHHHHhhCCE--EEECCCchHHHHHHHhCCCEEecCCccc
Confidence 99999998875411 0111 124679999999999999999987 9999999999999999999999999999
Q ss_pred cccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Q 012217 377 QPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEE 435 (468)
Q Consensus 377 Q~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~ 435 (468)
|+.||+++ +++|+|+.+.. ..+++++|.++|+++|+|+ +|+++++++++.+++
T Consensus 323 q~~~a~~l-~~~g~g~~l~~--~~~~~~~l~~ai~~~l~~~---~~~~~~~~l~~~~~~ 375 (392)
T TIGR01426 323 QPMTARRI-AELGLGRHLPP--EEVTAEKLREAVLAVLSDP---RYAERLRKMRAEIRE 375 (392)
T ss_pred HHHHHHHH-HHCCCEEEecc--ccCCHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHH
Confidence 99999999 67899998874 6789999999999999998 899999999999986
No 26
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=100.00 E-value=1.5e-39 Score=329.20 Aligned_cols=340 Identities=15% Similarity=0.153 Sum_probs=226.7
Q ss_pred cEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCCCCCCCCCCCCc---
Q 012217 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGLPASSDESPTA--- 87 (468)
Q Consensus 11 ~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l~~~~~~~~~~~~~~--- 87 (468)
|||+++++|+.||++|++.||++|++|||+|+|++++.+...+++. |++|.++++.......+....
T Consensus 1 mrIl~~~~p~~GHv~P~l~la~~L~~rGh~V~~~t~~~~~~~v~~~----------G~~~~~~~~~~~~~~~~~~~~~~~ 70 (401)
T cd03784 1 MRVLITTIGSRGDVQPLVALAWALRAAGHEVRVATPPEFADLVEAA----------GLEFVPVGGDPDELLASPERNAGL 70 (401)
T ss_pred CeEEEEeCCCcchHHHHHHHHHHHHHCCCeEEEeeCHhHHHHHHHc----------CCceeeCCCCHHHHHhhhhhcccc
Confidence 5999999999999999999999999999999999999888888876 899998875432110000000
Q ss_pred -----CC----------------------C---C-C---CCcccchHHHHHHHcCCCeEEEccccHHHHHHHhhhhhhhh
Q 012217 88 -----QD----------------------A---Y-S---LDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKE 133 (468)
Q Consensus 88 -----~~----------------------~---~-~---~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~ 133 (468)
.. + . . +|.+.+++..+|+++|||++.+++++......
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDlvi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~--------- 141 (401)
T cd03784 71 LLLGPGLLLGALRLLRREAEAMLDDLVAAARDWGPDLVVADPLAFAGAVAAEALGIPAVRLLLGPDTPTSA--------- 141 (401)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCEEEeCcHHHHHHHHHHHhCCCeEEeecccCCcccc---------
Confidence 00 0 0 0 77777888999999999999997654321100
Q ss_pred hCCCCccccccccccccccccccccccCCCccCccCccCcccccCCCchhHHHHHHHHHHhcc---------cCcEEEec
Q 012217 134 KGLFPVKVLADKSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEATENAS---------KASAIIIH 204 (468)
Q Consensus 134 ~g~~p~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~l~n 204 (468)
.+.. .+.. ....................+........ ..+..+..
T Consensus 142 ---~~~~-------------------~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~ 195 (401)
T cd03784 142 ---FPPP-------------------LGRA----NLRLYALLEAELWQDLLGAWLRARRRRLGLPPLSLLDGSDVPELYG 195 (401)
T ss_pred ---CCCc-------------------cchH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCcEEEe
Confidence 0000 0000 00000000000000000000111111000 11122222
Q ss_pred chhhccHHHHHHHhhcCCCceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCcCCC-
Q 012217 205 TFDALEQQVLNALSFMFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMN- 283 (468)
Q Consensus 205 t~~~le~p~l~~~~~~~p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~- 283 (468)
..+.+.++ .+.|+++..++|+....... + +..+.++..|++. .+++|||+|||+....
T Consensus 196 ~~~~~~~~-----~~~~~~~~~~~g~~~~~~~~---------~-----~~~~~~~~~~~~~--~~~~v~v~~Gs~~~~~~ 254 (401)
T cd03784 196 FSPAVLPP-----PPDWPRFDLVTGYGFRDVPY---------N-----GPPPPELWLFLAA--GRPPVYVGFGSMVVRDP 254 (401)
T ss_pred cCcccCCC-----CCCccccCcEeCCCCCCCCC---------C-----CCCCHHHHHHHhC--CCCcEEEeCCCCcccCH
Confidence 22222222 45677767777643321110 0 1234567788876 4569999999997644
Q ss_pred HHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHHHh
Q 012217 284 KQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLC 363 (468)
Q Consensus 284 ~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~ 363 (468)
.+.+..++++++..+.++||.++..... . ...++|+++.+|+||.++|+|+++ ||||||+||++|+++
T Consensus 255 ~~~~~~~~~a~~~~~~~~i~~~g~~~~~-------~---~~~~~~v~~~~~~p~~~ll~~~d~--~I~hgG~~t~~eal~ 322 (401)
T cd03784 255 EALARLDVEAVATLGQRAILSLGWGGLG-------A---EDLPDNVRVVDFVPHDWLLPRCAA--VVHHGGAGTTAAALR 322 (401)
T ss_pred HHHHHHHHHHHHHcCCeEEEEccCcccc-------c---cCCCCceEEeCCCCHHHHhhhhhe--eeecCCchhHHHHHH
Confidence 4567889999998899999998864210 0 123579999999999999999988 999999999999999
Q ss_pred cCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Q 012217 364 SGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEE 435 (468)
Q Consensus 364 ~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~ 435 (468)
+|||+|++|+..||+.||+++ +++|+|+.+.. ..+++++|.++|+++++++ ++++++++++.+++
T Consensus 323 ~GvP~v~~P~~~dQ~~~a~~~-~~~G~g~~l~~--~~~~~~~l~~al~~~l~~~----~~~~~~~~~~~~~~ 387 (401)
T cd03784 323 AGVPQLVVPFFGDQPFWAARV-AELGAGPALDP--RELTAERLAAALRRLLDPP----SRRRAAALLRRIRE 387 (401)
T ss_pred cCCCEEeeCCCCCcHHHHHHH-HHCCCCCCCCc--ccCCHHHHHHHHHHHhCHH----HHHHHHHHHHHHHh
Confidence 999999999999999999999 77899998875 5589999999999999744 66777777777764
No 27
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-37 Score=310.17 Aligned_cols=168 Identities=23% Similarity=0.347 Sum_probs=147.9
Q ss_pred CCceEEEeecCCcCCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcc
Q 012217 268 PKSVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIG 347 (468)
Q Consensus 268 ~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~ 347 (468)
++++||||+||.... .+.+..+++++...+.++|...+.. . . -...+++|+.+.+|+||..+|+++++
T Consensus 236 d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~~~~~-~--------~-~~~~~p~n~~v~~~~p~~~~l~~ad~- 303 (406)
T COG1819 236 DRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIVSLGGA-R--------D-TLVNVPDNVIVADYVPQLELLPRADA- 303 (406)
T ss_pred CCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEecccc-c--------c-ccccCCCceEEecCCCHHHHhhhcCE-
Confidence 466999999999876 8889999999999999999888651 1 0 01134689999999999999999999
Q ss_pred eeeeccChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCchHHHHHHHHH
Q 012217 348 GFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAM 427 (468)
Q Consensus 348 ~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~ 427 (468)
||||||+|||+|||++|||+|++|...||+.||.++ ++.|+|+.+.. +.++.+.++++|+++|+|+ .|+++++
T Consensus 304 -vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rv-e~~G~G~~l~~--~~l~~~~l~~av~~vL~~~---~~~~~~~ 376 (406)
T COG1819 304 -VIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERV-EELGAGIALPF--EELTEERLRAAVNEVLADD---SYRRAAE 376 (406)
T ss_pred -EEecCCcchHHHHHHcCCCEEEecCCcchhHHHHHH-HHcCCceecCc--ccCCHHHHHHHHHHHhcCH---HHHHHHH
Confidence 999999999999999999999999999999999999 88899999986 7899999999999999999 9999999
Q ss_pred HHHHHHHHHhCCCCchHHHHHHHHHHHHhcCC
Q 012217 428 EWKGLAEEAAAPHGSSSLNLDKLVNEILLSNK 459 (468)
Q Consensus 428 ~l~~~~~~a~~~gg~s~~~~~~~~~~~~~~~~ 459 (468)
++++.+++. +| ...+.+.++++.+.+.
T Consensus 377 ~~~~~~~~~---~g--~~~~a~~le~~~~~~~ 403 (406)
T COG1819 377 RLAEEFKEE---DG--PAKAADLLEEFAREKK 403 (406)
T ss_pred HHHHHhhhc---cc--HHHHHHHHHHHHhccc
Confidence 999999984 45 5777888888666543
No 28
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.84 E-value=1.7e-19 Score=178.32 Aligned_cols=145 Identities=21% Similarity=0.223 Sum_probs=107.7
Q ss_pred CCCceEEEeecCCcCCCH-HHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEeccc-Ch-HHhhcC
Q 012217 267 EPKSVIYVNFGSFIFMNK-QQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWC-PQ-EEVLKH 343 (468)
Q Consensus 267 ~~~~vv~vs~GS~~~~~~-~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-p~-~~il~~ 343 (468)
+++++|+|..||...... +.+.+++..+.. +..++|..+.+. +. ..... ..+..+.+|+ ++ ..++.+
T Consensus 183 ~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~~-~~~vv~~~G~~~-------~~-~~~~~-~~~~~~~~f~~~~m~~~~~~ 252 (352)
T PRK12446 183 RKKPVITIMGGSLGAKKINETVREALPELLL-KYQIVHLCGKGN-------LD-DSLQN-KEGYRQFEYVHGELPDILAI 252 (352)
T ss_pred CCCcEEEEECCccchHHHHHHHHHHHHhhcc-CcEEEEEeCCch-------HH-HHHhh-cCCcEEecchhhhHHHHHHh
Confidence 356799999999986554 345555555533 478899888541 11 11111 1345566777 43 468999
Q ss_pred CCcceeeeccChhhHHHHHhcCCcEEecCCC-----CCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCch
Q 012217 344 PSIGGFLTHCGWNSIVESLCSGVPMICWPFT-----GDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEK 418 (468)
Q Consensus 344 ~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~-----~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~ 418 (468)
+++ +|||||.+|++|++++|+|+|++|+. .||..||+.+ ++.|+|..+.. ..++++.|.+++.++++|++
T Consensus 253 adl--vIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l-~~~g~~~~l~~--~~~~~~~l~~~l~~ll~~~~ 327 (352)
T PRK12446 253 TDF--VISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESF-ERQGYASVLYE--EDVTVNSLIKHVEELSHNNE 327 (352)
T ss_pred CCE--EEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHH-HHCCCEEEcch--hcCCHHHHHHHHHHHHcCHH
Confidence 998 99999999999999999999999985 4899999999 56799988864 68899999999999997752
Q ss_pred HHHHHHHHHH
Q 012217 419 GKQMRNKAME 428 (468)
Q Consensus 419 ~~~~~~~a~~ 428 (468)
.|++++++
T Consensus 328 --~~~~~~~~ 335 (352)
T PRK12446 328 --KYKTALKK 335 (352)
T ss_pred --HHHHHHHH
Confidence 45554444
No 29
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.77 E-value=7.3e-17 Score=158.01 Aligned_cols=150 Identities=19% Similarity=0.234 Sum_probs=112.1
Q ss_pred CCceEEEeecCCcCCCH-HHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhh-cC-ceEecccChH-HhhcC
Q 012217 268 PKSVIYVNFGSFIFMNK-QQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAK-EK-GFVASWCPQE-EVLKH 343 (468)
Q Consensus 268 ~~~vv~vs~GS~~~~~~-~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~-~~-~~v~~~~p~~-~il~~ 343 (468)
++++|.|..||+....- +.+.++...+.+ ...+++..+.+. .+....... .+ +.+.+|..+. .++.-
T Consensus 182 ~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~~--------~~~~~~~~~~~~~~~v~~f~~dm~~~~~~ 252 (357)
T COG0707 182 DKKTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKND--------LEELKSAYNELGVVRVLPFIDDMAALLAA 252 (357)
T ss_pred CCcEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcch--------HHHHHHHHhhcCcEEEeeHHhhHHHHHHh
Confidence 45699999999986543 445555555555 567777777541 122222222 23 6677888875 58888
Q ss_pred CCcceeeeccChhhHHHHHhcCCcEEecCC-CC---CcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCch-
Q 012217 344 PSIGGFLTHCGWNSIVESLCSGVPMICWPF-TG---DQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEK- 418 (468)
Q Consensus 344 ~~~~~~v~hgG~~s~~eal~~GvP~v~~P~-~~---DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~- 418 (468)
+++ +||++|++|+.|.+++|+|+|.+|. .+ ||..||+.+ ++.|.|..++. .+++.+++.+.|.+++.+++
T Consensus 253 ADL--vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l-~~~gaa~~i~~--~~lt~~~l~~~i~~l~~~~~~ 327 (357)
T COG0707 253 ADL--VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFL-EKAGAALVIRQ--SELTPEKLAELILRLLSNPEK 327 (357)
T ss_pred ccE--EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHH-HhCCCEEEecc--ccCCHHHHHHHHHHHhcCHHH
Confidence 887 9999999999999999999999999 33 888999999 66699999985 67899999999999998753
Q ss_pred HHHHHHHHHHHHH
Q 012217 419 GKQMRNKAMEWKG 431 (468)
Q Consensus 419 ~~~~~~~a~~l~~ 431 (468)
-+.|++++++++.
T Consensus 328 l~~m~~~a~~~~~ 340 (357)
T COG0707 328 LKAMAENAKKLGK 340 (357)
T ss_pred HHHHHHHHHhcCC
Confidence 2466666666554
No 30
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.75 E-value=4.3e-17 Score=159.80 Aligned_cols=122 Identities=20% Similarity=0.326 Sum_probs=96.7
Q ss_pred CCceEEEeecCCcCCCHHHHHHHHHHHHcCC-CCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEeccc--ChHHhhcCC
Q 012217 268 PKSVIYVNFGSFIFMNKQQLIEVAMGLVNSN-HPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWC--PQEEVLKHP 344 (468)
Q Consensus 268 ~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~-~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--p~~~il~~~ 344 (468)
+++.|+|+||..... .+++++++.+ ..|++. +... .+...+|+.+.+|. .-.+++..+
T Consensus 191 ~~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~~~------------~~~~~~ni~~~~~~~~~~~~~m~~a 251 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG------DLIEALKALPDYQFIVF-GPNA------------ADPRPGNIHVRPFSTPDFAELMAAA 251 (318)
T ss_pred CCCEEEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cCCc------------ccccCCCEEEeecChHHHHHHHHhC
Confidence 345899999987643 5566666665 566655 5331 01115788888875 446789888
Q ss_pred CcceeeeccChhhHHHHHhcCCcEEecCC--CCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHH
Q 012217 345 SIGGFLTHCGWNSIVESLCSGVPMICWPF--TGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREM 413 (468)
Q Consensus 345 ~~~~~v~hgG~~s~~eal~~GvP~v~~P~--~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~ 413 (468)
++ +|||||+||++|++++|+|+|++|. +.+|..||+.+ +++|+|+.+.. +.++++.|+++|+++
T Consensus 252 d~--vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l-~~~G~~~~~~~--~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 252 DL--VISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKL-EELGLGIVLSQ--EDLTPERLAEFLERL 317 (318)
T ss_pred CE--EEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHH-HHCCCeEEccc--ccCCHHHHHHHHhcC
Confidence 88 9999999999999999999999999 78999999999 88899999875 789999999999764
No 31
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.68 E-value=2.4e-15 Score=147.48 Aligned_cols=124 Identities=18% Similarity=0.241 Sum_probs=87.3
Q ss_pred CceEEEeecCCcCCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccC--hHHhhcCCCc
Q 012217 269 KSVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCP--QEEVLKHPSI 346 (468)
Q Consensus 269 ~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p--~~~il~~~~~ 346 (468)
++.|+|.+||... ..+++++.+.+. +.+++.... .... ..++|+.+.+|.| ..++|+.+++
T Consensus 188 ~~~iLv~~g~~~~------~~l~~~l~~~~~-~~~i~~~~~------~~~~----~~~~~v~~~~~~~~~~~~~l~~ad~ 250 (321)
T TIGR00661 188 EDYILVYIGFEYR------YKILELLGKIAN-VKFVCYSYE------VAKN----SYNENVEIRRITTDNFKELIKNAEL 250 (321)
T ss_pred CCcEEEECCcCCH------HHHHHHHHhCCC-eEEEEeCCC------CCcc----ccCCCEEEEECChHHHHHHHHhCCE
Confidence 3477787888542 234566765543 233332210 0111 2257889899987 3567788887
Q ss_pred ceeeeccChhhHHHHHhcCCcEEecCCCC--CcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCc
Q 012217 347 GGFLTHCGWNSIVESLCSGVPMICWPFTG--DQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGE 417 (468)
Q Consensus 347 ~~~v~hgG~~s~~eal~~GvP~v~~P~~~--DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~ 417 (468)
||||||++|++|++++|+|+|++|..+ ||..||+.+ ++.|+|+.+.. ..+ ++.+++.++++++
T Consensus 251 --vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l-~~~g~~~~l~~--~~~---~~~~~~~~~~~~~ 315 (321)
T TIGR00661 251 --VITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKL-EDLGCGIALEY--KEL---RLLEAILDIRNMK 315 (321)
T ss_pred --EEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHH-HHCCCEEEcCh--hhH---HHHHHHHhccccc
Confidence 999999999999999999999999955 899999999 67799988864 333 5555666666666
No 32
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.57 E-value=4.3e-13 Score=133.64 Aligned_cols=114 Identities=14% Similarity=0.202 Sum_probs=85.4
Q ss_pred CceEecccC-hHHhhcCCCcceeeeccChhhHHHHHhcCCcEEecCC----CCCcccchhhheeeceeEEEEeCCCCCcc
Q 012217 328 KGFVASWCP-QEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPF----TGDQPTNGRYVCNEWGVGMEINGDDEDVI 402 (468)
Q Consensus 328 ~~~v~~~~p-~~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~----~~DQ~~na~~~~~~~g~g~~~~~~~~~~~ 402 (468)
++.+.+|.. ..+++..+++ +|+|+|.++++||+++|+|+|++|. .+||..|+..+ .+.|.|+.+.. +.++
T Consensus 236 ~v~~~g~~~~~~~~~~~~d~--~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i-~~~~~g~~~~~--~~~~ 310 (357)
T PRK00726 236 NAEVVPFIDDMAAAYAAADL--VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARAL-VDAGAALLIPQ--SDLT 310 (357)
T ss_pred cEEEeehHhhHHHHHHhCCE--EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHH-HHCCCEEEEEc--ccCC
Confidence 367778884 4689999998 9999999999999999999999997 46898999988 55699988874 4568
Q ss_pred hhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHH
Q 012217 403 RNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNE 453 (468)
Q Consensus 403 ~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~~~ 453 (468)
++.++++|.++++|+ +++++..+-+.+. .+.+++.+.++.+.+.
T Consensus 311 ~~~l~~~i~~ll~~~---~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 354 (357)
T PRK00726 311 PEKLAEKLLELLSDP---ERLEAMAEAARAL----GKPDAAERLADLIEEL 354 (357)
T ss_pred HHHHHHHHHHHHcCH---HHHHHHHHHHHhc----CCcCHHHHHHHHHHHH
Confidence 999999999999987 5544433333322 2334444444444443
No 33
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.52 E-value=2.1e-12 Score=128.20 Aligned_cols=137 Identities=15% Similarity=0.147 Sum_probs=96.3
Q ss_pred CCceEEEeecCCcCCCH-HHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHh---hcCceEeccc-ChHHhhc
Q 012217 268 PKSVIYVNFGSFIFMNK-QQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKA---KEKGFVASWC-PQEEVLK 342 (468)
Q Consensus 268 ~~~vv~vs~GS~~~~~~-~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~---~~~~~v~~~~-p~~~il~ 342 (468)
++.+|++..|+...... +.+.+++..+.+.+..+++.++.+ ..+.+.+.. .+|+.+.+|. ....+|.
T Consensus 180 ~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g--------~~~~l~~~~~~~~~~v~~~g~~~~~~~~l~ 251 (350)
T cd03785 180 GKPTLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKG--------DLEEVKKAYEELGVNYEVFPFIDDMAAAYA 251 (350)
T ss_pred CCeEEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCc--------cHHHHHHHHhccCCCeEEeehhhhHHHHHH
Confidence 34466676676643222 233344455543344556666543 112232222 3588888887 4467999
Q ss_pred CCCcceeeeccChhhHHHHHhcCCcEEecCC----CCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCc
Q 012217 343 HPSIGGFLTHCGWNSIVESLCSGVPMICWPF----TGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGE 417 (468)
Q Consensus 343 ~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~----~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~ 417 (468)
.+++ +|+++|.+++.||+++|+|+|+.|. ..+|..|+..+ .+.|.|+.+.. ...+.+++.++|+++++|+
T Consensus 252 ~ad~--~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l-~~~g~g~~v~~--~~~~~~~l~~~i~~ll~~~ 325 (350)
T cd03785 252 AADL--VISRAGASTVAELAALGLPAILIPLPYAADDHQTANARAL-VKAGAAVLIPQ--EELTPERLAAALLELLSDP 325 (350)
T ss_pred hcCE--EEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHH-HhCCCEEEEec--CCCCHHHHHHHHHHHhcCH
Confidence 9998 9999999999999999999999986 35788899988 45599988874 3468999999999999876
No 34
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.37 E-value=1.4e-14 Score=128.14 Aligned_cols=137 Identities=18% Similarity=0.267 Sum_probs=95.4
Q ss_pred eEEEeecCCcCCCH-HHHHHHHHHHHc--CCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccC-hHHhhcCCCc
Q 012217 271 VIYVNFGSFIFMNK-QQLIEVAMGLVN--SNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCP-QEEVLKHPSI 346 (468)
Q Consensus 271 vv~vs~GS~~~~~~-~~~~~~~~~l~~--~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p-~~~il~~~~~ 346 (468)
+|+|+.||.....- +.+..+...+.. ....++|..|..... .....+ .....|+.+.+|.+ ...++..+++
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~~----~~~~~~-~~~~~~v~~~~~~~~m~~~m~~aDl 75 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNNYE----ELKIKV-ENFNPNVKVFGFVDNMAELMAAADL 75 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCECH----HHCCCH-CCTTCCCEEECSSSSHHHHHHHHSE
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCcHH----HHHHHH-hccCCcEEEEechhhHHHHHHHcCE
Confidence 58999998864321 223333333333 247888888754110 000011 11125788999999 6789999998
Q ss_pred ceeeeccChhhHHHHHhcCCcEEecCCCC----CcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCc
Q 012217 347 GGFLTHCGWNSIVESLCSGVPMICWPFTG----DQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGE 417 (468)
Q Consensus 347 ~~~v~hgG~~s~~eal~~GvP~v~~P~~~----DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~ 417 (468)
+|||||.||++|++++|+|+|++|... +|..||..+ ++.|.|+.+.. ...+.+.|.++|.+++.++
T Consensus 76 --vIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~-~~~g~~~~~~~--~~~~~~~L~~~i~~l~~~~ 145 (167)
T PF04101_consen 76 --VISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKEL-AKKGAAIMLDE--SELNPEELAEAIEELLSDP 145 (167)
T ss_dssp --EEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHH-HHCCCCCCSEC--CC-SCCCHHHHHHCHCCCH
T ss_pred --EEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHH-HHcCCccccCc--ccCCHHHHHHHHHHHHcCc
Confidence 999999999999999999999999988 999999999 56699988874 5677999999999999876
No 35
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.33 E-value=1.9e-10 Score=114.00 Aligned_cols=77 Identities=17% Similarity=0.415 Sum_probs=65.2
Q ss_pred ChHHhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCC---CCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHH
Q 012217 336 PQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFT---GDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVRE 412 (468)
Q Consensus 336 p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~---~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~ 412 (468)
.-..++..+++ +|+++|.++++||+++|+|+|+.|.- .+|..|+..+ ...+.|..+.. +..+.+++.++|.+
T Consensus 243 ~~~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i-~~~~~G~~~~~--~~~~~~~l~~~i~~ 317 (348)
T TIGR01133 243 NMAAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFL-EDLGAGLVIRQ--KELLPEKLLEALLK 317 (348)
T ss_pred CHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHH-HHCCCEEEEec--ccCCHHHHHHHHHH
Confidence 45678999998 99999988999999999999999873 4677888888 55688988764 45689999999999
Q ss_pred HhcCc
Q 012217 413 MMEGE 417 (468)
Q Consensus 413 ~l~~~ 417 (468)
+++|+
T Consensus 318 ll~~~ 322 (348)
T TIGR01133 318 LLLDP 322 (348)
T ss_pred HHcCH
Confidence 99887
No 36
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=99.18 E-value=7.9e-10 Score=105.96 Aligned_cols=103 Identities=16% Similarity=0.168 Sum_probs=76.4
Q ss_pred ceEEEeecCCcCCCHHHHHHHHHHHHcC--CCCEEEEEcCCCCCCCCCCCchhHHHH--hhcCceEecccChH-HhhcCC
Q 012217 270 SVIYVNFGSFIFMNKQQLIEVAMGLVNS--NHPFLWIIRPDLVTGETADLPAEFEVK--AKEKGFVASWCPQE-EVLKHP 344 (468)
Q Consensus 270 ~vv~vs~GS~~~~~~~~~~~~~~~l~~~--~~~~lw~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~p~~-~il~~~ 344 (468)
+.|+|+||...... ....++++|.+. +.++.++++.... ..+.+.+. ...|+.+..+.++. .++..+
T Consensus 171 ~~iLi~~GG~d~~~--~~~~~l~~l~~~~~~~~i~vv~G~~~~------~~~~l~~~~~~~~~i~~~~~~~~m~~lm~~a 242 (279)
T TIGR03590 171 RRVLVSFGGADPDN--LTLKLLSALAESQINISITLVTGSSNP------NLDELKKFAKEYPNIILFIDVENMAELMNEA 242 (279)
T ss_pred CeEEEEeCCcCCcC--HHHHHHHHHhccccCceEEEEECCCCc------CHHHHHHHHHhCCCEEEEeCHHHHHHHHHHC
Confidence 47899998665433 334555666543 4567788876421 12233322 23578888999986 799999
Q ss_pred CcceeeeccChhhHHHHHhcCCcEEecCCCCCcccchhh
Q 012217 345 SIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRY 383 (468)
Q Consensus 345 ~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~ 383 (468)
++ +||+|| +|++|++++|+|+|++|...+|..||+.
T Consensus 243 Dl--~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 243 DL--AIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred CE--EEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 98 999999 9999999999999999999999999975
No 37
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=99.16 E-value=5.6e-09 Score=98.50 Aligned_cols=134 Identities=16% Similarity=0.197 Sum_probs=100.0
Q ss_pred CCceEEEeecCCcCCCHHHHHHHHHHHHc-CCCC--EEEEEcCCCCCCCCCCCchhHHHH----hh--cCceEecccCh-
Q 012217 268 PKSVIYVNFGSFIFMNKQQLIEVAMGLVN-SNHP--FLWIIRPDLVTGETADLPAEFEVK----AK--EKGFVASWCPQ- 337 (468)
Q Consensus 268 ~~~vv~vs~GS~~~~~~~~~~~~~~~l~~-~~~~--~lw~~~~~~~~~~~~~~~~~~~~~----~~--~~~~v~~~~p~- 337 (468)
.+--|.||-|--.. ..+.+...+.|-.- .+.+ .+.++++. +|+.-.++ .+ +++.|..|-.+
T Consensus 218 E~~~Ilvs~GGG~d-G~eLi~~~l~A~~~l~~l~~~~~ivtGP~--------MP~~~r~~l~~~A~~~p~i~I~~f~~~~ 288 (400)
T COG4671 218 EGFDILVSVGGGAD-GAELIETALAAAQLLAGLNHKWLIVTGPF--------MPEAQRQKLLASAPKRPHISIFEFRNDF 288 (400)
T ss_pred ccceEEEecCCChh-hHHHHHHHHHHhhhCCCCCcceEEEeCCC--------CCHHHHHHHHHhcccCCCeEEEEhhhhH
Confidence 33478887776542 34555555555433 3333 55556654 66554333 23 67888898776
Q ss_pred HHhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCC---CcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHh
Q 012217 338 EEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTG---DQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMM 414 (468)
Q Consensus 338 ~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~---DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l 414 (468)
..++.-++. +|+-||+||++|-|++|+|.+++|... +|..-|.|+ +++|+.-.+.. +.++++.++++|...+
T Consensus 289 ~~ll~gA~~--vVSm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl-~~LGL~dvL~p--e~lt~~~La~al~~~l 363 (400)
T COG4671 289 ESLLAGARL--VVSMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRL-EELGLVDVLLP--ENLTPQNLADALKAAL 363 (400)
T ss_pred HHHHHhhhe--eeecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHH-HhcCcceeeCc--ccCChHHHHHHHHhcc
Confidence 457877776 999999999999999999999999954 899999999 89999877765 7899999999999998
Q ss_pred c
Q 012217 415 E 415 (468)
Q Consensus 415 ~ 415 (468)
+
T Consensus 364 ~ 364 (400)
T COG4671 364 A 364 (400)
T ss_pred c
Confidence 7
No 38
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.15 E-value=6.4e-10 Score=111.68 Aligned_cols=167 Identities=11% Similarity=-0.018 Sum_probs=104.7
Q ss_pred CCceEEEeecCCcCCCHHHHHHHHHHHH---cC--CCCEEEEEcCCCCCCCCCCCchhHH---HHhhcCceEeccc-ChH
Q 012217 268 PKSVIYVNFGSFIFMNKQQLIEVAMGLV---NS--NHPFLWIIRPDLVTGETADLPAEFE---VKAKEKGFVASWC-PQE 338 (468)
Q Consensus 268 ~~~vv~vs~GS~~~~~~~~~~~~~~~l~---~~--~~~~lw~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~-p~~ 338 (468)
++++|.+..||....-......++++++ +. +.++++...... ..+.+. +....+..+..+. ...
T Consensus 190 ~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~-------~~~~~~~~~~~~~~~~~v~~~~~~~~ 262 (385)
T TIGR00215 190 NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFK-------RRLQFEQIKAEYGPDLQLHLIDGDAR 262 (385)
T ss_pred CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCch-------hHHHHHHHHHHhCCCCcEEEECchHH
Confidence 4568888888986432233344444333 22 234555443221 111221 1221122232221 335
Q ss_pred HhhcCCCcceeeeccChhhHHHHHhcCCcEEec----CCCC---------CcccchhhheeeceeEEEEeCCCCCcchhH
Q 012217 339 EVLKHPSIGGFLTHCGWNSIVESLCSGVPMICW----PFTG---------DQPTNGRYVCNEWGVGMEINGDDEDVIRNE 405 (468)
Q Consensus 339 ~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~----P~~~---------DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~ 405 (468)
.++..+++ ||+-+|..|+ |++++|+|+|++ |+.+ +|..|+..++ ..++...+.- +.++++.
T Consensus 263 ~~l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~-~~~~~pel~q--~~~~~~~ 336 (385)
T TIGR00215 263 KAMFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILA-NRLLVPELLQ--EECTPHP 336 (385)
T ss_pred HHHHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhc-CCccchhhcC--CCCCHHH
Confidence 68888888 9999999887 999999999999 8733 3788999984 4488777653 6899999
Q ss_pred HHHHHHHHhcCc----hH-HHHHHHHHHHHHHHHHHhCCCCchHHHHHHHH
Q 012217 406 VEKLVREMMEGE----KG-KQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLV 451 (468)
Q Consensus 406 l~~av~~~l~~~----~~-~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~ 451 (468)
|.+.+.++|.|+ +. +++++..+++.+++ +++|.+.+..+.++
T Consensus 337 l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~~~~~a~~i~ 383 (385)
T TIGR00215 337 LAIALLLLLENGLKAYKEMHRERQFFEELRQRI----YCNADSERAAQAVL 383 (385)
T ss_pred HHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHh----cCCCHHHHHHHHHh
Confidence 999999999876 42 45666666665554 45667665555443
No 39
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=99.15 E-value=1.5e-11 Score=105.14 Aligned_cols=54 Identities=20% Similarity=0.354 Sum_probs=48.8
Q ss_pred EEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCC
Q 012217 13 AVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDG 76 (468)
Q Consensus 13 il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l~~~ 76 (468)
|++++.|+.||++|++.||++|.+|||+|++++++.+.+.+++. |++|.+++.+
T Consensus 1 Ili~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~~~~~~~v~~~----------Gl~~~~~~~~ 54 (139)
T PF03033_consen 1 ILIATGGTRGHVYPFLALARALRRRGHEVRLATPPDFRERVEAA----------GLEFVPIPGD 54 (139)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHHTT-EEEEEETGGGHHHHHHT----------T-EEEESSSC
T ss_pred CEEEEcCChhHHHHHHHHHHHHhccCCeEEEeecccceeccccc----------CceEEEecCC
Confidence 78999999999999999999999999999999999999999877 9999999755
No 40
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.95 E-value=1e-08 Score=103.03 Aligned_cols=90 Identities=11% Similarity=0.059 Sum_probs=59.6
Q ss_pred HHhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCC--------Ccccc-h----hhheeeceeEEEEeCCCCCcchh
Q 012217 338 EEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTG--------DQPTN-G----RYVCNEWGVGMEINGDDEDVIRN 404 (468)
Q Consensus 338 ~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~--------DQ~~n-a----~~~~~~~g~g~~~~~~~~~~~~~ 404 (468)
..++..+++ +|+.+|.+++ |++++|+|+|+.|-.. .|..| + ..+ ...+++..+.. ...+++
T Consensus 256 ~~~~~~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~--~~~~~~ 329 (380)
T PRK00025 256 REAMAAADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLL-AGRELVPELLQ--EEATPE 329 (380)
T ss_pred HHHHHhCCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHh-cCCCcchhhcC--CCCCHH
Confidence 568889998 9999998887 9999999999985432 22222 2 222 22233333332 467899
Q ss_pred HHHHHHHHHhcCchH-HHHHHHHHHHHHHH
Q 012217 405 EVEKLVREMMEGEKG-KQMRNKAMEWKGLA 433 (468)
Q Consensus 405 ~l~~av~~~l~~~~~-~~~~~~a~~l~~~~ 433 (468)
+++++|.++++|++. ++|+++++++.+.+
T Consensus 330 ~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~ 359 (380)
T PRK00025 330 KLARALLPLLADGARRQALLEGFTELHQQL 359 (380)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHh
Confidence 999999999998832 34555554444443
No 41
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=98.90 E-value=4e-08 Score=99.15 Aligned_cols=166 Identities=20% Similarity=0.265 Sum_probs=109.5
Q ss_pred CCceEEEeecCCcCCCHHHHHHHHHHHH-c-CCCCEEEEEcCCCCCCCCCCCchhHHHHh--hcCceEecccChH-Hhhc
Q 012217 268 PKSVIYVNFGSFIFMNKQQLIEVAMGLV-N-SNHPFLWIIRPDLVTGETADLPAEFEVKA--KEKGFVASWCPQE-EVLK 342 (468)
Q Consensus 268 ~~~vv~vs~GS~~~~~~~~~~~~~~~l~-~-~~~~~lw~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~p~~-~il~ 342 (468)
++++|+++.|+.... ..+..+++++. . .+.+++++.+.+. .+-+.+.+.. .+++.+.+|..+. .++.
T Consensus 201 ~~~~ilv~~G~lg~~--k~~~~li~~~~~~~~~~~~vvv~G~~~------~l~~~l~~~~~~~~~v~~~G~~~~~~~~~~ 272 (391)
T PRK13608 201 DKQTILMSAGAFGVS--KGFDTMITDILAKSANAQVVMICGKSK------ELKRSLTAKFKSNENVLILGYTKHMNEWMA 272 (391)
T ss_pred CCCEEEEECCCcccc--hhHHHHHHHHHhcCCCceEEEEcCCCH------HHHHHHHHHhccCCCeEEEeccchHHHHHH
Confidence 456888888988632 23444555532 2 2356666655330 0112222221 2577888998764 6899
Q ss_pred CCCcceeeeccChhhHHHHHhcCCcEEec-CCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCchH-H
Q 012217 343 HPSIGGFLTHCGWNSIVESLCSGVPMICW-PFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKG-K 420 (468)
Q Consensus 343 ~~~~~~~v~hgG~~s~~eal~~GvP~v~~-P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~~-~ 420 (468)
.+++ ||+..|..|+.||+++|+|+|+. |.-++|..|+..+ ++.|+|+... +.+++.++|.++++|++. +
T Consensus 273 ~aDl--~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~-~~~G~g~~~~------~~~~l~~~i~~ll~~~~~~~ 343 (391)
T PRK13608 273 SSQL--MITKPGGITISEGLARCIPMIFLNPAPGQELENALYF-EEKGFGKIAD------TPEEAIKIVASLTNGNEQLT 343 (391)
T ss_pred hhhE--EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHH-HhCCcEEEeC------CHHHHHHHHHHHhcCHHHHH
Confidence 9998 99998889999999999999998 6666667899888 6669997654 688999999999987632 3
Q ss_pred HHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHhcC
Q 012217 421 QMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEILLSN 458 (468)
Q Consensus 421 ~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~~~~~~~~ 458 (468)
+|+++++++++ ..+....++.+++.+...+
T Consensus 344 ~m~~~~~~~~~--------~~s~~~i~~~l~~l~~~~~ 373 (391)
T PRK13608 344 NMISTMEQDKI--------KYATQTICRDLLDLIGHSS 373 (391)
T ss_pred HHHHHHHHhcC--------CCCHHHHHHHHHHHhhhhh
Confidence 45555554433 2344455555555554443
No 42
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.90 E-value=2.7e-06 Score=83.96 Aligned_cols=128 Identities=13% Similarity=0.184 Sum_probs=83.9
Q ss_pred ceEEEeecCCcC-CCHHHHHHHHHHHHcC-CCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHH---hhcCC
Q 012217 270 SVIYVNFGSFIF-MNKQQLIEVAMGLVNS-NHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEE---VLKHP 344 (468)
Q Consensus 270 ~vv~vs~GS~~~-~~~~~~~~~~~~l~~~-~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~---il~~~ 344 (468)
..+++..|+... ...+.+.+++..+... +..++ .++.+. ....+. ...+|+.+.+|+++.+ ++..+
T Consensus 197 ~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~-i~G~~~-------~~~~~~-~~~~~v~~~g~~~~~~~~~~~~~~ 267 (364)
T cd03814 197 RPVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLV-IVGDGP-------ARARLE-ARYPNVHFLGFLDGEELAAAYASA 267 (364)
T ss_pred CeEEEEEeccccccCHHHHHHHHHHhhhcCCceEE-EEeCCc-------hHHHHh-ccCCcEEEEeccCHHHHHHHHHhC
Confidence 466777787653 2345555555555432 33444 444321 111111 2346888999988765 78888
Q ss_pred CcceeeeccC----hhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCc
Q 012217 345 SIGGFLTHCG----WNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGE 417 (468)
Q Consensus 345 ~~~~~v~hgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~ 417 (468)
++ +|..+. .+++.||+++|+|+|+.+..+ +...+ +..+.|..+. .-+.+++.++|.+++.|+
T Consensus 268 d~--~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i-~~~~~g~~~~----~~~~~~l~~~i~~l~~~~ 333 (364)
T cd03814 268 DV--FVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIV-TDGENGLLVE----PGDAEAFAAALAALLADP 333 (364)
T ss_pred CE--EEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhh-cCCcceEEcC----CCCHHHHHHHHHHHHcCH
Confidence 88 776654 378999999999999987543 44455 5557887765 346788999999999887
No 43
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=98.84 E-value=4.5e-08 Score=98.45 Aligned_cols=133 Identities=18% Similarity=0.289 Sum_probs=95.0
Q ss_pred CCceEEEeecCCcCCCHHHHHHHHHHHHcC-CCCEEEEEcCCCCCCCCCCCchhHHH---HhhcCceEecccChH-Hhhc
Q 012217 268 PKSVIYVNFGSFIFMNKQQLIEVAMGLVNS-NHPFLWIIRPDLVTGETADLPAEFEV---KAKEKGFVASWCPQE-EVLK 342 (468)
Q Consensus 268 ~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~-~~~~lw~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~p~~-~il~ 342 (468)
++++|++..|+..... .+..+++++.+. +.+++++.+.+. .+.+.+.+ ..++|+.+.+|+++. .++.
T Consensus 201 ~~~~il~~~G~~~~~k--~~~~li~~l~~~~~~~~viv~G~~~------~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~~ 272 (380)
T PRK13609 201 NKKILLIMAGAHGVLG--NVKELCQSLMSVPDLQVVVVCGKNE------ALKQSLEDLQETNPDALKVFGYVENIDELFR 272 (380)
T ss_pred CCcEEEEEcCCCCCCc--CHHHHHHHHhhCCCcEEEEEeCCCH------HHHHHHHHHHhcCCCcEEEEechhhHHHHHH
Confidence 3457888788876422 345666676543 456666655320 01122222 223578888999874 7999
Q ss_pred CCCcceeeeccChhhHHHHHhcCCcEEec-CCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCc
Q 012217 343 HPSIGGFLTHCGWNSIVESLCSGVPMICW-PFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGE 417 (468)
Q Consensus 343 ~~~~~~~v~hgG~~s~~eal~~GvP~v~~-P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~ 417 (468)
.+++ ||+..|..|+.||+++|+|+|+. |..+.|..|+..+ ++.|.|+... +.+++.++|.++++|+
T Consensus 273 ~aD~--~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~-~~~G~~~~~~------~~~~l~~~i~~ll~~~ 339 (380)
T PRK13609 273 VTSC--MITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYF-ERKGAAVVIR------DDEEVFAKTEALLQDD 339 (380)
T ss_pred hccE--EEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHH-HhCCcEEEEC------CHHHHHHHHHHHHCCH
Confidence 9998 99999988999999999999995 6667778899887 5568887543 5799999999999887
No 44
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=98.80 E-value=2e-07 Score=93.81 Aligned_cols=134 Identities=19% Similarity=0.177 Sum_probs=90.3
Q ss_pred CCceEEEeecCCcCCCHHH-HHHHHHHHH-----cCCCCEEEEEcCCCCCCCCCCCchhHHHH-hhcCceEecccChH-H
Q 012217 268 PKSVIYVNFGSFIFMNKQQ-LIEVAMGLV-----NSNHPFLWIIRPDLVTGETADLPAEFEVK-AKEKGFVASWCPQE-E 339 (468)
Q Consensus 268 ~~~vv~vs~GS~~~~~~~~-~~~~~~~l~-----~~~~~~lw~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~p~~-~ 339 (468)
++++|.+..|+........ ++.+...+. ..+..++++.+.+. .+-+.+.+. ...++.+.+|.++. .
T Consensus 205 ~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~------~~~~~L~~~~~~~~v~~~G~~~~~~~ 278 (382)
T PLN02605 205 DLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNK------KLQSKLESRDWKIPVKVRGFVTNMEE 278 (382)
T ss_pred CCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCH------HHHHHHHhhcccCCeEEEeccccHHH
Confidence 4557777777765433332 233322221 12345666766431 011112111 12467788898864 5
Q ss_pred hhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCCCcc-cchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcC
Q 012217 340 VLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQP-TNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEG 416 (468)
Q Consensus 340 il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~-~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~ 416 (468)
++..+++ ||+.+|.+|+.||+++|+|+|+.+....|. .|+..+ .+.|.|+.+. +++++.++|.+++.|
T Consensus 279 l~~aaDv--~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i-~~~g~g~~~~------~~~~la~~i~~ll~~ 347 (382)
T PLN02605 279 WMGACDC--IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYV-VDNGFGAFSE------SPKEIARIVAEWFGD 347 (382)
T ss_pred HHHhCCE--EEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHH-HhCCceeecC------CHHHHHHHHHHHHcC
Confidence 8888888 999999999999999999999999877775 688888 4458887542 789999999999987
No 45
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=98.73 E-value=2.5e-05 Score=80.80 Aligned_cols=139 Identities=12% Similarity=0.096 Sum_probs=86.3
Q ss_pred eEEEeecCCcCCCHHHHHHHHHHHHcC-CCCEEEEEcCCCCCCCCCCCchhHHHHh-hcCceEecccChHH---hhcCCC
Q 012217 271 VIYVNFGSFIFMNKQQLIEVAMGLVNS-NHPFLWIIRPDLVTGETADLPAEFEVKA-KEKGFVASWCPQEE---VLKHPS 345 (468)
Q Consensus 271 vv~vs~GS~~~~~~~~~~~~~~~l~~~-~~~~lw~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~p~~~---il~~~~ 345 (468)
.+++..|++.. .+.+..++++++.. +.+++ .+|.+. ..+.+.+.. ..++.+.+|+++.+ ++..++
T Consensus 264 ~~i~~vGrl~~--~K~~~~li~a~~~~~~~~l~-ivG~G~-------~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aD 333 (465)
T PLN02871 264 PLIVYVGRLGA--EKNLDFLKRVMERLPGARLA-FVGDGP-------YREELEKMFAGTPTVFTGMLQGDELSQAYASGD 333 (465)
T ss_pred eEEEEeCCCch--hhhHHHHHHHHHhCCCcEEE-EEeCCh-------HHHHHHHHhccCCeEEeccCCHHHHHHHHHHCC
Confidence 45566687653 23455667777654 34444 444321 112232222 24778889998654 788888
Q ss_pred cceeeeccC----hhhHHHHHhcCCcEEecCCCCCcccchhhheee---ceeEEEEeCCCCCcchhHHHHHHHHHhcCch
Q 012217 346 IGGFLTHCG----WNSIVESLCSGVPMICWPFTGDQPTNGRYVCNE---WGVGMEINGDDEDVIRNEVEKLVREMMEGEK 418 (468)
Q Consensus 346 ~~~~v~hgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~---~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~ 418 (468)
+ ||.-.. -+++.||+++|+|+|+....+ ....+ +. -+.|..+. .-+.++++++|.++++|++
T Consensus 334 v--~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg----~~eiv-~~~~~~~~G~lv~----~~d~~~la~~i~~ll~~~~ 402 (465)
T PLN02871 334 V--FVMPSESETLGFVVLEAMASGVPVVAARAGG----IPDII-PPDQEGKTGFLYT----PGDVDDCVEKLETLLADPE 402 (465)
T ss_pred E--EEECCcccccCcHHHHHHHcCCCEEEcCCCC----cHhhh-hcCCCCCceEEeC----CCCHHHHHHHHHHHHhCHH
Confidence 8 775443 346889999999999876432 22233 33 46787775 2478999999999998773
Q ss_pred -HHHHHHHHHHHH
Q 012217 419 -GKQMRNKAMEWK 430 (468)
Q Consensus 419 -~~~~~~~a~~l~ 430 (468)
.+++.+++++..
T Consensus 403 ~~~~~~~~a~~~~ 415 (465)
T PLN02871 403 LRERMGAAAREEV 415 (465)
T ss_pred HHHHHHHHHHHHH
Confidence 245666666544
No 46
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=98.53 E-value=0.00015 Score=71.52 Aligned_cols=143 Identities=14% Similarity=0.192 Sum_probs=86.6
Q ss_pred ceEEEeecCCcCC-CHHHHHHHHHHHHcC--CCCEEEEEcCCCCCCCCCCCchhHHH-----HhhcCceEecccChHH--
Q 012217 270 SVIYVNFGSFIFM-NKQQLIEVAMGLVNS--NHPFLWIIRPDLVTGETADLPAEFEV-----KAKEKGFVASWCPQEE-- 339 (468)
Q Consensus 270 ~vv~vs~GS~~~~-~~~~~~~~~~~l~~~--~~~~lw~~~~~~~~~~~~~~~~~~~~-----~~~~~~~v~~~~p~~~-- 339 (468)
..+++..|++... ..+.+.+++..+... +..+++.-+.. ..+.+.+ ...+++.+.+++|+.+
T Consensus 202 ~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~G~~~--------~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 273 (374)
T cd03817 202 EPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIVGDGP--------EREELEELARELGLADRVIFTGFVPREELP 273 (374)
T ss_pred CeEEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEEeCCc--------hHHHHHHHHHHcCCCCcEEEeccCChHHHH
Confidence 4666777876532 345555555555443 34444333221 1112222 1246788889998754
Q ss_pred -hhcCCCcceeeecc----ChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHh
Q 012217 340 -VLKHPSIGGFLTHC----GWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMM 414 (468)
Q Consensus 340 -il~~~~~~~~v~hg----G~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l 414 (468)
++..+++ +|..+ .-+++.||+++|+|+|+... ...+..+ +..+.|..+.. -+. ++.+++.+++
T Consensus 274 ~~~~~ad~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~----~~~~~~i-~~~~~g~~~~~----~~~-~~~~~i~~l~ 341 (374)
T cd03817 274 DYYKAADL--FVFASTTETQGLVLLEAMAAGLPVVAVDA----PGLPDLV-ADGENGFLFPP----GDE-ALAEALLRLL 341 (374)
T ss_pred HHHHHcCE--EEecccccCcChHHHHHHHcCCcEEEeCC----CChhhhe-ecCceeEEeCC----CCH-HHHHHHHHHH
Confidence 6888888 66433 24789999999999999754 3344454 54467777763 122 8999999999
Q ss_pred cCch-HHHHHHHHHHHHHH
Q 012217 415 EGEK-GKQMRNKAMEWKGL 432 (468)
Q Consensus 415 ~~~~-~~~~~~~a~~l~~~ 432 (468)
++++ .+.+.+++++..+.
T Consensus 342 ~~~~~~~~~~~~~~~~~~~ 360 (374)
T cd03817 342 QDPELRRRLSKNAEESAEK 360 (374)
T ss_pred hChHHHHHHHHHHHHHHHH
Confidence 8773 23455555555544
No 47
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=98.43 E-value=0.001 Score=65.86 Aligned_cols=93 Identities=12% Similarity=0.112 Sum_probs=63.3
Q ss_pred hcCceEecccC-hH---HhhcCCCcceeeeccC----hhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCC
Q 012217 326 KEKGFVASWCP-QE---EVLKHPSIGGFLTHCG----WNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGD 397 (468)
Q Consensus 326 ~~~~~v~~~~p-~~---~il~~~~~~~~v~hgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~ 397 (468)
..++...+|++ +. .++..+++ +|.-.. .+++.||+++|+|+|+.... .....+ ...+.|+.+.
T Consensus 243 ~~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~----~~~e~~-~~~~~g~~~~-- 313 (365)
T cd03825 243 PFPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDVG----GIPDIV-DHGVTGYLAK-- 313 (365)
T ss_pred CCceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecCC----CChhhe-eCCCceEEeC--
Confidence 46777888988 43 46888888 776543 47999999999999987542 222333 3324676665
Q ss_pred CCCcchhHHHHHHHHHhcCch-HHHHHHHHHHH
Q 012217 398 DEDVIRNEVEKLVREMMEGEK-GKQMRNKAMEW 429 (468)
Q Consensus 398 ~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l 429 (468)
..+.+++++++.+++++++ ...+.+++++.
T Consensus 314 --~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~ 344 (365)
T cd03825 314 --PGDPEDLAEGIEWLLADPDEREELGEAAREL 344 (365)
T ss_pred --CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 3578999999999998773 23444444443
No 48
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=98.41 E-value=4.2e-06 Score=84.38 Aligned_cols=133 Identities=17% Similarity=0.121 Sum_probs=86.8
Q ss_pred CceEEEeecCCcCCCHHHHHHHHHHHHc----CCCCEEEEEcCCCCCCCCCCCchhHHHHhh------------------
Q 012217 269 KSVIYVNFGSFIFMNKQQLIEVAMGLVN----SNHPFLWIIRPDLVTGETADLPAEFEVKAK------------------ 326 (468)
Q Consensus 269 ~~vv~vs~GS~~~~~~~~~~~~~~~l~~----~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~------------------ 326 (468)
+++|.+--||........+..++++++. .+..|++.+.+.. ..+.+.+...
T Consensus 205 ~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~-------~~~~~~~~l~~~g~~~~~~~~~~~~~~~ 277 (396)
T TIGR03492 205 RFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSL-------SLEKLQAILEDLGWQLEGSSEDQTSLFQ 277 (396)
T ss_pred CCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCC-------CHHHHHHHHHhcCceecCCccccchhhc
Confidence 4589999999853322233334444433 3567887774321 1112221111
Q ss_pred -cCceEecccCh-HHhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCCCcccchhhheeec----eeEEEEeCCCCC
Q 012217 327 -EKGFVASWCPQ-EEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEW----GVGMEINGDDED 400 (468)
Q Consensus 327 -~~~~v~~~~p~-~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~----g~g~~~~~~~~~ 400 (468)
+++.+..+..+ ..++..+++ +|+-+|..| .|++..|+|+|.+|.-..|. |+... ++. |.++.+. .
T Consensus 278 ~~~~~v~~~~~~~~~~l~~ADl--vI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~-~~~~~l~g~~~~l~----~ 348 (396)
T TIGR03492 278 KGTLEVLLGRGAFAEILHWADL--GIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFA-EAQSRLLGGSVFLA----S 348 (396)
T ss_pred cCceEEEechHhHHHHHHhCCE--EEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHH-HhhHhhcCCEEecC----C
Confidence 12444455433 568989998 999999766 99999999999999866675 98766 432 6566664 3
Q ss_pred cchhHHHHHHHHHhcCc
Q 012217 401 VIRNEVEKLVREMMEGE 417 (468)
Q Consensus 401 ~~~~~l~~av~~~l~~~ 417 (468)
.+.+.+.+++.++++|+
T Consensus 349 ~~~~~l~~~l~~ll~d~ 365 (396)
T TIGR03492 349 KNPEQAAQVVRQLLADP 365 (396)
T ss_pred CCHHHHHHHHHHHHcCH
Confidence 45699999999999887
No 49
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=98.38 E-value=0.00012 Score=72.40 Aligned_cols=144 Identities=16% Similarity=0.189 Sum_probs=86.7
Q ss_pred CceEEEeecCCcC-CCHHHHHHHHHHHHcC-CCCEEEEEcCCCCCCCCCCCchhHHH----HhhcCceEecccChHH---
Q 012217 269 KSVIYVNFGSFIF-MNKQQLIEVAMGLVNS-NHPFLWIIRPDLVTGETADLPAEFEV----KAKEKGFVASWCPQEE--- 339 (468)
Q Consensus 269 ~~vv~vs~GS~~~-~~~~~~~~~~~~l~~~-~~~~lw~~~~~~~~~~~~~~~~~~~~----~~~~~~~v~~~~p~~~--- 339 (468)
+..+++..|+... ...+.+.+.+..+.+. +..++ .++.+. ....+.+ ...+|+.+.+++++..
T Consensus 219 ~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~-i~G~~~-------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 290 (394)
T cd03794 219 DKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFL-IVGDGP-------EKEELKELAKALGLDNVTFLGRVPKEELPE 290 (394)
T ss_pred CcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEE-EeCCcc-------cHHHHHHHHHHcCCCcEEEeCCCChHHHHH
Confidence 3477777888753 2344555555555443 34443 344321 1122222 2236888888998654
Q ss_pred hhcCCCcceeeeccC---------hhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHH
Q 012217 340 VLKHPSIGGFLTHCG---------WNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLV 410 (468)
Q Consensus 340 il~~~~~~~~v~hgG---------~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av 410 (468)
++..+++ +|.... -+++.||+++|+|+|+.+..+.+.. + ...+.|..+. .-+.++++++|
T Consensus 291 ~~~~~di--~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~----~-~~~~~g~~~~----~~~~~~l~~~i 359 (394)
T cd03794 291 LLAAADV--GLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAEL----V-EEAGAGLVVP----PGDPEALAAAI 359 (394)
T ss_pred HHHhhCe--eEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhh----h-ccCCcceEeC----CCCHHHHHHHH
Confidence 6788888 554322 2347999999999999987654432 2 2225676665 23789999999
Q ss_pred HHHhcCch-HHHHHHHHHHHHH
Q 012217 411 REMMEGEK-GKQMRNKAMEWKG 431 (468)
Q Consensus 411 ~~~l~~~~-~~~~~~~a~~l~~ 431 (468)
.+++.|++ .+.+++++++..+
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~ 381 (394)
T cd03794 360 LELLDDPEERAEMGENGRRYVE 381 (394)
T ss_pred HHHHhChHHHHHHHHHHHHHHH
Confidence 99997762 2345555544443
No 50
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=98.35 E-value=0.00045 Score=69.36 Aligned_cols=92 Identities=10% Similarity=0.239 Sum_probs=65.4
Q ss_pred cCceEecccChHH---hhcCCCcceeeecc---C-hhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCC
Q 012217 327 EKGFVASWCPQEE---VLKHPSIGGFLTHC---G-WNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDE 399 (468)
Q Consensus 327 ~~~~v~~~~p~~~---il~~~~~~~~v~hg---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~ 399 (468)
+++.+.+|+|+.+ ++..+++ +|... | -.++.||+++|+|+|+....+ ....+ +..+.|..+.
T Consensus 283 ~~v~~~g~~~~~~~~~~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~----~~e~i-~~~~~g~~~~---- 351 (398)
T cd03800 283 DRVDFPGRVSREDLPALYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAVGG----PRDIV-VDGVTGLLVD---- 351 (398)
T ss_pred ceEEEeccCCHHHHHHHHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCCCC----HHHHc-cCCCCeEEeC----
Confidence 6788889999865 5888888 66442 2 368999999999999876433 44445 5546787775
Q ss_pred CcchhHHHHHHHHHhcCch-HHHHHHHHHHH
Q 012217 400 DVIRNEVEKLVREMMEGEK-GKQMRNKAMEW 429 (468)
Q Consensus 400 ~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l 429 (468)
.-+.++++++|.+++++++ ...+.++|++.
T Consensus 352 ~~~~~~l~~~i~~l~~~~~~~~~~~~~a~~~ 382 (398)
T cd03800 352 PRDPEALAAALRRLLTDPALRRRLSRAGLRR 382 (398)
T ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 3469999999999998763 23445555443
No 51
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=98.32 E-value=0.00095 Score=65.47 Aligned_cols=133 Identities=15% Similarity=0.182 Sum_probs=81.1
Q ss_pred CCceEEEeecCCcCC-CHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHH---hhcC
Q 012217 268 PKSVIYVNFGSFIFM-NKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEE---VLKH 343 (468)
Q Consensus 268 ~~~vv~vs~GS~~~~-~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~---il~~ 343 (468)
.+..+++..|++... ..+.+.+.+..+...+.+++ .++..... ...........++.+.+|+++.+ ++..
T Consensus 189 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~-i~G~~~~~-----~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ 262 (359)
T cd03823 189 GGRLRFGFIGQLTPHKGVDLLLEAFKRLPRGDIELV-IVGNGLEL-----EEESYELEGDPRVEFLGAYPQEEIDDFYAE 262 (359)
T ss_pred CCceEEEEEecCccccCHHHHHHHHHHHHhcCcEEE-EEcCchhh-----hHHHHhhcCCCeEEEeCCCCHHHHHHHHHh
Confidence 344677778887532 23444444444433345544 44432100 00000001246888889997654 6888
Q ss_pred CCcceeee----ccCh-hhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCc
Q 012217 344 PSIGGFLT----HCGW-NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGE 417 (468)
Q Consensus 344 ~~~~~~v~----hgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~ 417 (468)
+++ +|. ..|+ .++.||+++|+|+|+.+. ..+...+ +..+.|..+. .-+.+++.+++.++++|+
T Consensus 263 ad~--~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i-~~~~~g~~~~----~~d~~~l~~~i~~l~~~~ 330 (359)
T cd03823 263 IDV--LVVPSIWPENFPLVIREALAAGVPVIASDI----GGMAELV-RDGVNGLLFP----PGDAEDLAAALERLIDDP 330 (359)
T ss_pred CCE--EEEcCcccCCCChHHHHHHHCCCCEEECCC----CCHHHHh-cCCCcEEEEC----CCCHHHHHHHHHHHHhCh
Confidence 888 563 2344 478999999999999754 3455555 4435677776 345899999999999876
No 52
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=98.27 E-value=0.00096 Score=65.64 Aligned_cols=91 Identities=14% Similarity=0.188 Sum_probs=62.2
Q ss_pred hcCceEecccChHH---hhcCCCcceeeecc---C-hhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCC
Q 012217 326 KEKGFVASWCPQEE---VLKHPSIGGFLTHC---G-WNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDD 398 (468)
Q Consensus 326 ~~~~~v~~~~p~~~---il~~~~~~~~v~hg---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~ 398 (468)
.+++.+.+|+++.+ ++..+++ +|.-. | -+++.||+++|+|+|+.+. ......+ .. +.|.....
T Consensus 261 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~~~~-~~-~~~~~~~~-- 330 (375)
T cd03821 261 EDRVTFTGMLYGEDKAAALADADL--FVLPSHSENFGIVVAEALACGTPVVTTDK----VPWQELI-EY-GCGWVVDD-- 330 (375)
T ss_pred cceEEEcCCCChHHHHHHHhhCCE--EEeccccCCCCcHHHHHHhcCCCEEEcCC----CCHHHHh-hc-CceEEeCC--
Confidence 46788889999644 5788887 54332 2 3689999999999999754 3334444 44 67766652
Q ss_pred CCcchhHHHHHHHHHhcCch-HHHHHHHHHHH
Q 012217 399 EDVIRNEVEKLVREMMEGEK-GKQMRNKAMEW 429 (468)
Q Consensus 399 ~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l 429 (468)
+.+++.++|.+++++++ .+.+.+++++.
T Consensus 331 ---~~~~~~~~i~~l~~~~~~~~~~~~~~~~~ 359 (375)
T cd03821 331 ---DVDALAAALRRALELPQRLKAMGENGRAL 359 (375)
T ss_pred ---ChHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 44999999999998762 23445555444
No 53
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=98.27 E-value=0.00074 Score=65.91 Aligned_cols=147 Identities=13% Similarity=0.114 Sum_probs=84.9
Q ss_pred CCceEEEeecCCcCC-CHHHHHHHHHHHHcCC--CCEEEEEcCCCCCCCCCCCchhHHHH--hhcCceEecccCh-HHhh
Q 012217 268 PKSVIYVNFGSFIFM-NKQQLIEVAMGLVNSN--HPFLWIIRPDLVTGETADLPAEFEVK--AKEKGFVASWCPQ-EEVL 341 (468)
Q Consensus 268 ~~~vv~vs~GS~~~~-~~~~~~~~~~~l~~~~--~~~lw~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~p~-~~il 341 (468)
.+..+++..|++... ..+.+.+.++.+.+.+ ..++ .++..... .......... ...++.+.++..+ ..++
T Consensus 186 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~-i~G~~~~~---~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 261 (359)
T cd03808 186 EDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLL-LVGDGDEE---NPAAILEIEKLGLEGRVEFLGFRDDVPELL 261 (359)
T ss_pred CCCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEE-EEcCCCcc---hhhHHHHHHhcCCcceEEEeeccccHHHHH
Confidence 345788888887533 3455555555555433 3433 33432110 0000000111 2356777776443 4688
Q ss_pred cCCCcceeeeccC----hhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCc
Q 012217 342 KHPSIGGFLTHCG----WNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGE 417 (468)
Q Consensus 342 ~~~~~~~~v~hgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~ 417 (468)
..+++ +|.-.. -+++.||+++|+|+|+-+..+ +...+ +..+.|..+. .-+.+++.++|.+++.++
T Consensus 262 ~~adi--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~----~~~~i-~~~~~g~~~~----~~~~~~~~~~i~~l~~~~ 330 (359)
T cd03808 262 AAADV--FVLPSYREGLPRVLLEAMAMGRPVIATDVPG----CREAV-IDGVNGFLVP----PGDAEALADAIERLIEDP 330 (359)
T ss_pred HhccE--EEecCcccCcchHHHHHHHcCCCEEEecCCC----chhhh-hcCcceEEEC----CCCHHHHHHHHHHHHhCH
Confidence 88887 665433 478999999999999975433 33444 4346677665 347899999999999876
Q ss_pred h-HHHHHHHHHHH
Q 012217 418 K-GKQMRNKAMEW 429 (468)
Q Consensus 418 ~-~~~~~~~a~~l 429 (468)
+ ..++.+++++.
T Consensus 331 ~~~~~~~~~~~~~ 343 (359)
T cd03808 331 ELRARMGQAARKR 343 (359)
T ss_pred HHHHHHHHHHHHH
Confidence 3 23344444443
No 54
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.23 E-value=0.0027 Score=61.92 Aligned_cols=82 Identities=10% Similarity=0.194 Sum_probs=60.7
Q ss_pred hhcCceEecccChH---HhhcCCCcceeee----ccChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCC
Q 012217 325 AKEKGFVASWCPQE---EVLKHPSIGGFLT----HCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGD 397 (468)
Q Consensus 325 ~~~~~~v~~~~p~~---~il~~~~~~~~v~----hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~ 397 (468)
..+++.+.+++++. .++..+++ +|. -+.-+++.||+++|+|+|+.+. ..+...+ +..+.|+.+.
T Consensus 254 ~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~-~~~~~g~~~~-- 324 (374)
T cd03801 254 LGDRVTFLGFVPDEDLPALYAAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVV-EDGETGLLVP-- 324 (374)
T ss_pred CCcceEEEeccChhhHHHHHHhcCE--EEecchhccccchHHHHHHcCCcEEEeCC----CChhHHh-cCCcceEEeC--
Confidence 34688888999754 47888887 553 2445789999999999999765 3345455 4346777765
Q ss_pred CCCcchhHHHHHHHHHhcCc
Q 012217 398 DEDVIRNEVEKLVREMMEGE 417 (468)
Q Consensus 398 ~~~~~~~~l~~av~~~l~~~ 417 (468)
..+.+++.++|.+++.++
T Consensus 325 --~~~~~~l~~~i~~~~~~~ 342 (374)
T cd03801 325 --PGDPEALAEAILRLLDDP 342 (374)
T ss_pred --CCCHHHHHHHHHHHHcCh
Confidence 346899999999999877
No 55
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=98.20 E-value=0.003 Score=63.86 Aligned_cols=96 Identities=13% Similarity=0.156 Sum_probs=64.9
Q ss_pred cCceEecccChHH---hhcCCCcceeeec-cCh-hhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCc
Q 012217 327 EKGFVASWCPQEE---VLKHPSIGGFLTH-CGW-NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDV 401 (468)
Q Consensus 327 ~~~~v~~~~p~~~---il~~~~~~~~v~h-gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~ 401 (468)
+++.+.+++|+.+ ++..+++-.+.+. .|. +++.||+++|+|+|+.. .......+ +.-..|+.+. .-
T Consensus 281 ~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~----~~g~~e~i-~~~~~G~lv~----~~ 351 (396)
T cd03818 281 SRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSD----TAPVREVI-TDGENGLLVD----FF 351 (396)
T ss_pred ceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcC----CCCchhhc-ccCCceEEcC----CC
Confidence 5788889999765 6778888222232 232 48999999999999864 33444444 4424576665 34
Q ss_pred chhHHHHHHHHHhcCch-HHHHHHHHHHHHH
Q 012217 402 IRNEVEKLVREMMEGEK-GKQMRNKAMEWKG 431 (468)
Q Consensus 402 ~~~~l~~av~~~l~~~~-~~~~~~~a~~l~~ 431 (468)
+.++++++|.++++|++ ..++.+++++..+
T Consensus 352 d~~~la~~i~~ll~~~~~~~~l~~~ar~~~~ 382 (396)
T cd03818 352 DPDALAAAVIELLDDPARRARLRRAARRTAL 382 (396)
T ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 79999999999998873 2455555555443
No 56
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.17 E-value=0.0035 Score=62.30 Aligned_cols=92 Identities=14% Similarity=0.145 Sum_probs=63.6
Q ss_pred cCceEecccCh-HHhhcCCCcceeeec----cChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCc
Q 012217 327 EKGFVASWCPQ-EEVLKHPSIGGFLTH----CGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDV 401 (468)
Q Consensus 327 ~~~~v~~~~p~-~~il~~~~~~~~v~h----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~ 401 (468)
+++.+.++.++ ..++..+++ +|.- +.-.++.||+++|+|+|+... ...+..+ +.-..|..+. .-
T Consensus 253 ~~v~~~g~~~~~~~~~~~~d~--~v~ps~~E~~~~~~~EAma~g~PvI~s~~----~~~~e~i-~~~~~G~~~~----~~ 321 (371)
T cd04962 253 DDVLFLGKQDHVEELLSIADL--FLLPSEKESFGLAALEAMACGVPVVASNA----GGIPEVV-KHGETGFLVD----VG 321 (371)
T ss_pred ceEEEecCcccHHHHHHhcCE--EEeCCCcCCCccHHHHHHHcCCCEEEeCC----CCchhhh-cCCCceEEcC----CC
Confidence 56777777765 458888888 5522 234699999999999999644 3445455 4435676554 34
Q ss_pred chhHHHHHHHHHhcCch-HHHHHHHHHHH
Q 012217 402 IRNEVEKLVREMMEGEK-GKQMRNKAMEW 429 (468)
Q Consensus 402 ~~~~l~~av~~~l~~~~-~~~~~~~a~~l 429 (468)
+.++++++|.+++++++ ..++++++++.
T Consensus 322 ~~~~l~~~i~~l~~~~~~~~~~~~~~~~~ 350 (371)
T cd04962 322 DVEAMAEYALSLLEDDELWQEFSRAARNR 350 (371)
T ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 78999999999998763 24566666665
No 57
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=98.15 E-value=0.0061 Score=59.08 Aligned_cols=145 Identities=17% Similarity=0.205 Sum_probs=82.5
Q ss_pred ceEEEeecCCcCC-CHHHHHHHHHHHHcCCCCE-EEEEcCCCCCCCCCCCchhHH---HH--hhcCceEecccC-hHHhh
Q 012217 270 SVIYVNFGSFIFM-NKQQLIEVAMGLVNSNHPF-LWIIRPDLVTGETADLPAEFE---VK--AKEKGFVASWCP-QEEVL 341 (468)
Q Consensus 270 ~vv~vs~GS~~~~-~~~~~~~~~~~l~~~~~~~-lw~~~~~~~~~~~~~~~~~~~---~~--~~~~~~v~~~~p-~~~il 341 (468)
..+++..|+.... ..+.+.++++.+.+....+ ++.++... ....+. .+ ...++.+.++.. -..++
T Consensus 178 ~~~i~~~g~~~~~K~~~~l~~~~~~l~~~~~~~~l~i~G~~~-------~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 250 (348)
T cd03820 178 SKRILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDGP-------EREALEALIKELGLEDRVILLGFTKNIEEYY 250 (348)
T ss_pred CcEEEEEEeeccccCHHHHHHHHHHHHhcCCCeEEEEEeCCC-------CHHHHHHHHHHcCCCCeEEEcCCcchHHHHH
Confidence 3566667776532 3445555555554333332 22333221 111221 11 124566666633 34688
Q ss_pred cCCCcceeeeccC----hhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCc
Q 012217 342 KHPSIGGFLTHCG----WNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGE 417 (468)
Q Consensus 342 ~~~~~~~~v~hgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~ 417 (468)
..+++ +|.-.. -+++.||+++|+|+|+.+..+.+. .+.+....|..++ ..+.++++++|.++++|+
T Consensus 251 ~~ad~--~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~----~~~~~~~~g~~~~----~~~~~~~~~~i~~ll~~~ 320 (348)
T cd03820 251 AKASI--FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPS----EIIEDGVNGLLVP----NGDVEALAEALLRLMEDE 320 (348)
T ss_pred HhCCE--EEeCccccccCHHHHHHHHcCCCEEEecCCCchH----hhhccCcceEEeC----CCCHHHHHHHHHHHHcCH
Confidence 88887 665542 468999999999999876544332 2323323677665 346899999999999887
Q ss_pred hH-HHHHHHHHHHHH
Q 012217 418 KG-KQMRNKAMEWKG 431 (468)
Q Consensus 418 ~~-~~~~~~a~~l~~ 431 (468)
+. +.+++++++..+
T Consensus 321 ~~~~~~~~~~~~~~~ 335 (348)
T cd03820 321 ELRKRMGANARESAE 335 (348)
T ss_pred HHHHHHHHHHHHHHH
Confidence 32 345555544333
No 58
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=98.09 E-value=0.0016 Score=66.39 Aligned_cols=91 Identities=16% Similarity=0.284 Sum_probs=62.5
Q ss_pred CceEe-cccChHH---hhcCCCcceeee-c---cC---hhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeC
Q 012217 328 KGFVA-SWCPQEE---VLKHPSIGGFLT-H---CG---WNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEING 396 (468)
Q Consensus 328 ~~~v~-~~~p~~~---il~~~~~~~~v~-h---gG---~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~ 396 (468)
++.+. +|+|..+ +|..+++ +|. + -| -+++.||+++|+|+|+... ......+ +.-+.|+.+.
T Consensus 295 ~~~~~~g~~~~~~~~~~l~~aDv--~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~----~~~~eiv-~~~~~G~lv~- 366 (415)
T cd03816 295 KVTIRTPWLSAEDYPKLLASADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCALDF----KCIDELV-KHGENGLVFG- 366 (415)
T ss_pred cEEEEcCcCCHHHHHHHHHhCCE--EEEccccccccCCcHHHHHHHHcCCCEEEeCC----CCHHHHh-cCCCCEEEEC-
Confidence 44444 5887654 6888888 553 1 12 3479999999999999643 3344444 5546787662
Q ss_pred CCCCcchhHHHHHHHHHhcC---ch-HHHHHHHHHHHHH
Q 012217 397 DDEDVIRNEVEKLVREMMEG---EK-GKQMRNKAMEWKG 431 (468)
Q Consensus 397 ~~~~~~~~~l~~av~~~l~~---~~-~~~~~~~a~~l~~ 431 (468)
+.++++++|.++++| ++ .+.|.+++++.++
T Consensus 367 -----d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~ 400 (415)
T cd03816 367 -----DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESE 400 (415)
T ss_pred -----CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhh
Confidence 689999999999988 43 4567777766653
No 59
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=98.04 E-value=0.0076 Score=60.95 Aligned_cols=128 Identities=15% Similarity=0.166 Sum_probs=75.0
Q ss_pred CceEEEeecCCcCC-CHHHHHHHHHHHHcC--CCCEEEEEcCCCCCCCCCCCchhHH---HH--hhcCceEecccChH--
Q 012217 269 KSVIYVNFGSFIFM-NKQQLIEVAMGLVNS--NHPFLWIIRPDLVTGETADLPAEFE---VK--AKEKGFVASWCPQE-- 338 (468)
Q Consensus 269 ~~vv~vs~GS~~~~-~~~~~~~~~~~l~~~--~~~~lw~~~~~~~~~~~~~~~~~~~---~~--~~~~~~v~~~~p~~-- 338 (468)
+..+++..|..... ..+.+.+.+..+.+. +..+++ ++.+. ..+.+. ++ +.+++.+.+|+|+.
T Consensus 192 ~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i-~G~g~-------~~~~l~~~~~~~~l~~~v~~~G~~~~~~~ 263 (398)
T cd03796 192 DKITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFII-GGDGP-------KRILLEEMREKYNLQDRVELLGAVPHERV 263 (398)
T ss_pred CceEEEEEeccchhcCHHHHHHHHHHHHhhCCCEEEEE-EeCCc-------hHHHHHHHHHHhCCCCeEEEeCCCCHHHH
Confidence 34677777877532 234444444444332 333333 33221 112222 22 23567888999864
Q ss_pred -HhhcCCCcceeeec---cCh-hhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHH
Q 012217 339 -EVLKHPSIGGFLTH---CGW-NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREM 413 (468)
Q Consensus 339 -~il~~~~~~~~v~h---gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~ 413 (468)
.++..+++ +|.- -|. .++.||+++|+|+|+.+..+ ....+ +. |.+.... .+.+++++++.++
T Consensus 264 ~~~l~~ad~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg----~~e~i-~~-~~~~~~~-----~~~~~l~~~l~~~ 330 (398)
T cd03796 264 RDVLVQGHI--FLNTSLTEAFCIAIVEAASCGLLVVSTRVGG----IPEVL-PP-DMILLAE-----PDVESIVRKLEEA 330 (398)
T ss_pred HHHHHhCCE--EEeCChhhccCHHHHHHHHcCCCEEECCCCC----chhhe-eC-CceeecC-----CCHHHHHHHHHHH
Confidence 47778887 6542 244 49999999999999987643 22233 33 3332222 2789999999999
Q ss_pred hcCc
Q 012217 414 MEGE 417 (468)
Q Consensus 414 l~~~ 417 (468)
+++.
T Consensus 331 l~~~ 334 (398)
T cd03796 331 ISIL 334 (398)
T ss_pred HhCh
Confidence 9764
No 60
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.92 E-value=0.0023 Score=59.42 Aligned_cols=140 Identities=14% Similarity=0.156 Sum_probs=96.4
Q ss_pred eEEEeecCCcCCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHh--hcCceEecccCh-HHhhcCCCcc
Q 012217 271 VIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKA--KEKGFVASWCPQ-EEVLKHPSIG 347 (468)
Q Consensus 271 vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~p~-~~il~~~~~~ 347 (468)
-|+|++|-.. +....-+++..|.+....+-.++++.. .-++....+. .+|..+...... ..++..++.
T Consensus 160 ~ilI~lGGsD--pk~lt~kvl~~L~~~~~nl~iV~gs~~------p~l~~l~k~~~~~~~i~~~~~~~dma~LMke~d~- 230 (318)
T COG3980 160 DILITLGGSD--PKNLTLKVLAELEQKNVNLHIVVGSSN------PTLKNLRKRAEKYPNINLYIDTNDMAELMKEADL- 230 (318)
T ss_pred eEEEEccCCC--hhhhHHHHHHHhhccCeeEEEEecCCC------cchhHHHHHHhhCCCeeeEecchhHHHHHHhcch-
Confidence 5888887543 234556677778777766666776321 1112222222 245555544443 358888887
Q ss_pred eeeeccChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCchHHHHHHHHH
Q 012217 348 GFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAM 427 (468)
Q Consensus 348 ~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~ 427 (468)
.|+-+| .|+.|++.-|+|.+++|+...|---|+.. +.+|+-..+.. .++.+.+.--+.+++.|. ..|.+.-
T Consensus 231 -aI~AaG-stlyEa~~lgvP~l~l~~a~NQ~~~a~~f-~~lg~~~~l~~---~l~~~~~~~~~~~i~~d~---~~rk~l~ 301 (318)
T COG3980 231 -AISAAG-STLYEALLLGVPSLVLPLAENQIATAKEF-EALGIIKQLGY---HLKDLAKDYEILQIQKDY---ARRKNLS 301 (318)
T ss_pred -heeccc-hHHHHHHHhcCCceEEeeeccHHHHHHHH-HhcCchhhccC---CCchHHHHHHHHHhhhCH---HHhhhhh
Confidence 888877 69999999999999999999999999998 77788777653 367777777788888877 4454443
Q ss_pred H
Q 012217 428 E 428 (468)
Q Consensus 428 ~ 428 (468)
.
T Consensus 302 ~ 302 (318)
T COG3980 302 F 302 (318)
T ss_pred h
Confidence 3
No 61
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=97.78 E-value=9.4e-05 Score=61.62 Aligned_cols=110 Identities=18% Similarity=0.263 Sum_probs=71.8
Q ss_pred eEEEeecCCcCCCH---HHHHHHHHHHHcCCC-CEEEEEcCCCCCCCCCCCchhHHHHhhcCceEe---cccCh-HHhhc
Q 012217 271 VIYVNFGSFIFMNK---QQLIEVAMGLVNSNH-PFLWIIRPDLVTGETADLPAEFEVKAKEKGFVA---SWCPQ-EEVLK 342 (468)
Q Consensus 271 vv~vs~GS~~~~~~---~~~~~~~~~l~~~~~-~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~~~p~-~~il~ 342 (468)
.+||+-||.....- -.-.+..+.|.+.|. +.+..++.+.. ..+..........++.+ +|-|- ....+
T Consensus 5 ~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~-----~~~d~~~~~~k~~gl~id~y~f~psl~e~I~ 79 (170)
T KOG3349|consen 5 TVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQP-----FFGDPIDLIRKNGGLTIDGYDFSPSLTEDIR 79 (170)
T ss_pred EEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCcc-----CCCCHHHhhcccCCeEEEEEecCccHHHHHh
Confidence 89999999873211 112346677777774 56667775421 12222221112223333 35665 45666
Q ss_pred CCCcceeeeccChhhHHHHHhcCCcEEecCC----CCCcccchhhheee
Q 012217 343 HPSIGGFLTHCGWNSIVESLCSGVPMICWPF----TGDQPTNGRYVCNE 387 (468)
Q Consensus 343 ~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~----~~DQ~~na~~~~~~ 387 (468)
.+++ +|+|+|+||++|.+..|+|.|+++- -..|-.-|..++++
T Consensus 80 ~Adl--VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~e 126 (170)
T KOG3349|consen 80 SADL--VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEE 126 (170)
T ss_pred hccE--EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhc
Confidence 6777 9999999999999999999999986 33688888888544
No 62
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=97.74 E-value=0.0024 Score=64.15 Aligned_cols=93 Identities=14% Similarity=0.211 Sum_probs=63.6
Q ss_pred hhcCceEecccChHH---hhcCCCcceeeecc----Ch-hhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeC
Q 012217 325 AKEKGFVASWCPQEE---VLKHPSIGGFLTHC----GW-NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEING 396 (468)
Q Consensus 325 ~~~~~~v~~~~p~~~---il~~~~~~~~v~hg----G~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~ 396 (468)
.+.++.+.+++|+.+ ++..+++ ||... |. .++.||+++|+|+|+....+ +...+ +.-..|..+.
T Consensus 255 l~~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg----~~Eiv-~~~~~G~~l~- 326 (380)
T PRK15484 255 IGDRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTKGG----ITEFV-LEGITGYHLA- 326 (380)
T ss_pred cCCcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCCCC----cHhhc-ccCCceEEEe-
Confidence 346778888988654 6888888 66533 33 57789999999999986532 33344 4435676554
Q ss_pred CCCCcchhHHHHHHHHHhcCchHHHHHHHHH
Q 012217 397 DDEDVIRNEVEKLVREMMEGEKGKQMRNKAM 427 (468)
Q Consensus 397 ~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~ 427 (468)
...+.++++++|.++++|++..++.++++
T Consensus 327 --~~~d~~~la~~I~~ll~d~~~~~~~~~ar 355 (380)
T PRK15484 327 --EPMTSDSIISDINRTLADPELTQIAEQAK 355 (380)
T ss_pred --CCCCHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 24579999999999999874333444443
No 63
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=97.71 E-value=0.0017 Score=65.92 Aligned_cols=161 Identities=18% Similarity=0.199 Sum_probs=93.4
Q ss_pred ceEEEeecCCcCCC-HHHHHHHHHHHHcCC--CCEEEEEcCCCCCCCCCCCchhHHHHh-----hcCceEecccChHH--
Q 012217 270 SVIYVNFGSFIFMN-KQQLIEVAMGLVNSN--HPFLWIIRPDLVTGETADLPAEFEVKA-----KEKGFVASWCPQEE-- 339 (468)
Q Consensus 270 ~vv~vs~GS~~~~~-~~~~~~~~~~l~~~~--~~~lw~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~p~~~-- 339 (468)
...+++.|.+.... .+.+.+.+..+.+.+ ..+.|++-++. .....+.+.. .+++.+.+|+++.+
T Consensus 230 ~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g------~~~~~l~~~~~~~~~~~~V~f~G~v~~~e~~ 303 (407)
T cd04946 230 TLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGG------PLEDTLKELAESKPENISVNFTGELSNSEVY 303 (407)
T ss_pred CEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCc------hHHHHHHHHHHhcCCCceEEEecCCChHHHH
Confidence 46667778776332 333333333343332 46666543321 0112222211 24677889999764
Q ss_pred -hhcCCCcceeeeccC----hhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHh
Q 012217 340 -VLKHPSIGGFLTHCG----WNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMM 414 (468)
Q Consensus 340 -il~~~~~~~~v~hgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l 414 (468)
++...++.+||...- -++++||+++|+|+|+... ......+ +.-+.|..+. ..-+.++++++|.+++
T Consensus 304 ~~~~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~v----gg~~e~i-~~~~~G~l~~---~~~~~~~la~~I~~ll 375 (407)
T cd04946 304 KLYKENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNV----GGTPEIV-DNGGNGLLLS---KDPTPNELVSSLSKFI 375 (407)
T ss_pred HHHhhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCC----CCcHHHh-cCCCcEEEeC---CCCCHHHHHHHHHHHH
Confidence 444444444776553 3689999999999999643 3345555 5534787775 3457899999999999
Q ss_pred cCch-HHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHH
Q 012217 415 EGEK-GKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLV 451 (468)
Q Consensus 415 ~~~~-~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~ 451 (468)
+|++ ...|+++|++..+ +.-+.+...++|+
T Consensus 376 ~~~~~~~~m~~~ar~~~~-------~~f~~~~~~~~~~ 406 (407)
T cd04946 376 DNEEEYQTMREKAREKWE-------ENFNASKNYREFA 406 (407)
T ss_pred hCHHHHHHHHHHHHHHHH-------HHcCHHHhHHHhc
Confidence 8763 2345555554443 2445555555553
No 64
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.70 E-value=0.056 Score=53.27 Aligned_cols=124 Identities=14% Similarity=0.203 Sum_probs=68.7
Q ss_pred EEeecCCcCCCHHHHHHHHHHHHcCC--CCEEEEEcCCCCCCCCCCCchhHHH--HhhcCceEecccChHH---hhcCCC
Q 012217 273 YVNFGSFIFMNKQQLIEVAMGLVNSN--HPFLWIIRPDLVTGETADLPAEFEV--KAKEKGFVASWCPQEE---VLKHPS 345 (468)
Q Consensus 273 ~vs~GS~~~~~~~~~~~~~~~l~~~~--~~~lw~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~p~~~---il~~~~ 345 (468)
++..|++... +.+..+++++.... .+++ .+|.... ...+.+.+.+ ...+++.+.+++++.+ ++..++
T Consensus 196 i~~~G~~~~~--Kg~~~li~a~~~l~~~~~l~-ivG~~~~---~~~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ad 269 (363)
T cd04955 196 YLLVGRIVPE--NNIDDLIEAFSKSNSGKKLV-IVGNADH---NTPYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAA 269 (363)
T ss_pred EEEEeccccc--CCHHHHHHHHHhhccCceEE-EEcCCCC---cchHHHHHHHHhCCCCcEEEccccChHHHHHHHHhCC
Confidence 4556877532 22444555555443 4444 4443210 0111112221 2246888899998864 566666
Q ss_pred cceeeeccCh-----hhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCc
Q 012217 346 IGGFLTHCGW-----NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGE 417 (468)
Q Consensus 346 ~~~~v~hgG~-----~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~ 417 (468)
+ ++.+.-. +++.||+++|+|+|+....+ +...+ +. .|..+.. .+.++++|.++++++
T Consensus 270 ~--~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~----~~e~~-~~--~g~~~~~------~~~l~~~i~~l~~~~ 331 (363)
T cd04955 270 L--FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPF----NREVL-GD--KAIYFKV------GDDLASLLEELEADP 331 (363)
T ss_pred E--EEeCCccCCCCChHHHHHHHcCCCEEEecCCc----cceee-cC--CeeEecC------chHHHHHHHHHHhCH
Confidence 6 5544332 57999999999999975542 22222 32 2333331 112999999999876
No 65
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.67 E-value=0.00079 Score=66.41 Aligned_cols=144 Identities=15% Similarity=0.180 Sum_probs=87.6
Q ss_pred ceEEEeecCCcCCCHHHHHHHHHHHHcCC-CCEEEEEcCCCCCCCCCCCchhHHH-----HhhcCceEecccChH---Hh
Q 012217 270 SVIYVNFGSFIFMNKQQLIEVAMGLVNSN-HPFLWIIRPDLVTGETADLPAEFEV-----KAKEKGFVASWCPQE---EV 340 (468)
Q Consensus 270 ~vv~vs~GS~~~~~~~~~~~~~~~l~~~~-~~~lw~~~~~~~~~~~~~~~~~~~~-----~~~~~~~v~~~~p~~---~i 340 (468)
..+++..|+.... +.+..+++++++.. ..++++ +.+. ....+.+ ...+|+.+.+|+|+. .+
T Consensus 191 ~~~i~~~G~~~~~--K~~~~li~a~~~l~~~~l~i~-G~g~-------~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~ 260 (357)
T cd03795 191 RPFFLFVGRLVYY--KGLDVLLEAAAALPDAPLVIV-GEGP-------LEAELEALAAALGLLDRVRFLGRLDDEEKAAL 260 (357)
T ss_pred CcEEEEecccccc--cCHHHHHHHHHhccCcEEEEE-eCCh-------hHHHHHHHHHhcCCcceEEEcCCCCHHHHHHH
Confidence 3667777876532 33455666666655 444333 3220 1122221 124689999999975 47
Q ss_pred hcCCCcceeeec---cCh-hhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcC
Q 012217 341 LKHPSIGGFLTH---CGW-NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEG 416 (468)
Q Consensus 341 l~~~~~~~~v~h---gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~ 416 (468)
+..+++.++.++ -|. .++.||+++|+|+|+....+... .+.+.-+.|..+. .-+.++++++|.++++|
T Consensus 261 ~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~----~i~~~~~~g~~~~----~~d~~~~~~~i~~l~~~ 332 (357)
T cd03795 261 LAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGS----YVNLHGVTGLVVP----PGDPAALAEAIRRLLED 332 (357)
T ss_pred HHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchh----HHhhCCCceEEeC----CCCHHHHHHHHHHHHHC
Confidence 777888333332 343 47899999999999976554443 2211125666664 34799999999999988
Q ss_pred ch-HHHHHHHHHHHHH
Q 012217 417 EK-GKQMRNKAMEWKG 431 (468)
Q Consensus 417 ~~-~~~~~~~a~~l~~ 431 (468)
++ ..++++++++..+
T Consensus 333 ~~~~~~~~~~~~~~~~ 348 (357)
T cd03795 333 PELRERLGEAARERAE 348 (357)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 73 2455555555443
No 66
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=97.66 E-value=0.016 Score=56.78 Aligned_cols=126 Identities=18% Similarity=0.174 Sum_probs=75.1
Q ss_pred CCceEEEeecCCcC----CCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEe-cccChHHhhc
Q 012217 268 PKSVIYVNFGSFIF----MNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVA-SWCPQEEVLK 342 (468)
Q Consensus 268 ~~~vv~vs~GS~~~----~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~p~~~il~ 342 (468)
+++.|++-+-+..+ .....+.++++.|++.+..+|...+... .+ ...++. ++.+. .-+.-.++|.
T Consensus 178 ~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~-------~~-~~~~~~--~~~i~~~~vd~~~Ll~ 247 (335)
T PF04007_consen 178 DEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYED-------QR-ELFEKY--GVIIPPEPVDGLDLLY 247 (335)
T ss_pred CCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcc-------hh-hHHhcc--CccccCCCCCHHHHHH
Confidence 45688888877431 2335577899999988877444433220 11 111111 24443 3455568999
Q ss_pred CCCcceeeeccChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHh
Q 012217 343 HPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMM 414 (468)
Q Consensus 343 ~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l 414 (468)
++++ ||+-|| ....||...|+|.|-+ +-++-...-+.+.++ |. ... .-+.+++.+.|++.+
T Consensus 248 ~a~l--~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~~-Gl--l~~----~~~~~ei~~~v~~~~ 308 (335)
T PF04007_consen 248 YADL--VIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIEK-GL--LYH----STDPDEIVEYVRKNL 308 (335)
T ss_pred hcCE--EEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHHC-CC--eEe----cCCHHHHHHHHHHhh
Confidence 9998 998877 7778999999999975 222211222334344 54 232 346777777665544
No 67
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=97.66 E-value=0.00046 Score=68.73 Aligned_cols=131 Identities=16% Similarity=0.139 Sum_probs=82.5
Q ss_pred CCceEEEeecCCcCC-CHHHHHHHHHHHHcCCC-CEEEEEcCCCCCCCCCCCchhHHH---Hh---hcCceEecccChH-
Q 012217 268 PKSVIYVNFGSFIFM-NKQQLIEVAMGLVNSNH-PFLWIIRPDLVTGETADLPAEFEV---KA---KEKGFVASWCPQE- 338 (468)
Q Consensus 268 ~~~vv~vs~GS~~~~-~~~~~~~~~~~l~~~~~-~~lw~~~~~~~~~~~~~~~~~~~~---~~---~~~~~v~~~~p~~- 338 (468)
++++|++++|..... ..+.+..++++++.... .+.+++.... ...+.+.+ +. .+++.+.+..++.
T Consensus 197 ~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~------~~~~~l~~~~~~~~~~~~~v~~~~~~~~~~ 270 (363)
T cd03786 197 PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHP------RTRPRIREAGLEFLGHHPNVLLISPLGYLY 270 (363)
T ss_pred CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCC------ChHHHHHHHHHhhccCCCCEEEECCcCHHH
Confidence 345788888887643 45567778887765433 2444443221 01122222 11 3567776655443
Q ss_pred --HhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcC
Q 012217 339 --EVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEG 416 (468)
Q Consensus 339 --~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~ 416 (468)
.++..+++ ||+..| |.+.||+++|+|+|+++.. |. ++.+ .+.|+++.+. -+.+++.++|.+++++
T Consensus 271 ~~~l~~~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~-~~~g~~~~~~-----~~~~~i~~~i~~ll~~ 337 (363)
T cd03786 271 FLLLLKNADL--VLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPET-VESGTNVLVG-----TDPEAILAAIEKLLSD 337 (363)
T ss_pred HHHHHHcCcE--EEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchh-hheeeEEecC-----CCHHHHHHHHHHHhcC
Confidence 46777888 999999 7788999999999998642 22 3333 2336665543 1589999999999987
Q ss_pred c
Q 012217 417 E 417 (468)
Q Consensus 417 ~ 417 (468)
+
T Consensus 338 ~ 338 (363)
T cd03786 338 E 338 (363)
T ss_pred c
Confidence 6
No 68
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=97.66 E-value=0.00072 Score=67.54 Aligned_cols=153 Identities=10% Similarity=0.099 Sum_probs=87.9
Q ss_pred ceEEEeecCCcCCCHHHHHHHHHHHHcC-----CCCEEEEEcCCCCCCCCCCCchhHHHHh--hcCceEecccCh---HH
Q 012217 270 SVIYVNFGSFIFMNKQQLIEVAMGLVNS-----NHPFLWIIRPDLVTGETADLPAEFEVKA--KEKGFVASWCPQ---EE 339 (468)
Q Consensus 270 ~vv~vs~GS~~~~~~~~~~~~~~~l~~~-----~~~~lw~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~p~---~~ 339 (468)
.+|+++++-.... .+.+..+++++.+. +.++++...++. .....+.+.. .+++.+.+.+++ ..
T Consensus 198 ~~vl~~~hr~~~~-~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 270 (365)
T TIGR00236 198 RYILLTLHRRENV-GEPLENIFKAIREIVEEFEDVQIVYPVHLNP------VVREPLHKHLGDSKRVHLIEPLEYLDFLN 270 (365)
T ss_pred CEEEEecCchhhh-hhHHHHHHHHHHHHHHHCCCCEEEEECCCCh------HHHHHHHHHhCCCCCEEEECCCChHHHHH
Confidence 3666654432221 13456666666542 345555533321 0111122222 257777776655 35
Q ss_pred hhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCchH
Q 012217 340 VLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKG 419 (468)
Q Consensus 340 il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~~ 419 (468)
++.++++ +|+-.|.. +.||+++|+|+|..+..++++. .+ + .|.++.+. .++++|.+++.++++|+
T Consensus 271 ~l~~ad~--vv~~Sg~~-~~EA~a~g~PvI~~~~~~~~~e---~~-~-~g~~~lv~-----~d~~~i~~ai~~ll~~~-- 335 (365)
T TIGR00236 271 LAANSHL--ILTDSGGV-QEEAPSLGKPVLVLRDTTERPE---TV-E-AGTNKLVG-----TDKENITKAAKRLLTDP-- 335 (365)
T ss_pred HHHhCCE--EEECChhH-HHHHHHcCCCEEECCCCCCChH---HH-h-cCceEEeC-----CCHHHHHHHHHHHHhCh--
Confidence 6777877 89877644 7999999999999976665542 22 3 36665553 37899999999999877
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCchHHHHHH
Q 012217 420 KQMRNKAMEWKGLAEEAAAPHGSSSLNLDK 449 (468)
Q Consensus 420 ~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~ 449 (468)
..+++..+-. +.+++|+++.+.++.
T Consensus 336 -~~~~~~~~~~----~~~g~~~a~~ri~~~ 360 (365)
T TIGR00236 336 -DEYKKMSNAS----NPYGDGEASERIVEE 360 (365)
T ss_pred -HHHHHhhhcC----CCCcCchHHHHHHHH
Confidence 4544433222 223445555444443
No 69
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=97.63 E-value=0.0035 Score=63.57 Aligned_cols=161 Identities=12% Similarity=0.139 Sum_probs=93.8
Q ss_pred ceEEEeecCCcCC-CHHHHHHHHHHHHcCCCCEE-EEEcCCCCCCCCCCCchhHHH---H--hhcCceEecccChHH---
Q 012217 270 SVIYVNFGSFIFM-NKQQLIEVAMGLVNSNHPFL-WIIRPDLVTGETADLPAEFEV---K--AKEKGFVASWCPQEE--- 339 (468)
Q Consensus 270 ~vv~vs~GS~~~~-~~~~~~~~~~~l~~~~~~~l-w~~~~~~~~~~~~~~~~~~~~---~--~~~~~~v~~~~p~~~--- 339 (468)
+..+++.|.+... ..+.+.+.+..+.+.+..+- +.+|.+. ..+.+.+ + +.+++.+.+|+|+.+
T Consensus 222 ~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~-------~~~~l~~~~~~~~l~~~V~~~G~~~~~el~~ 294 (406)
T PRK15427 222 PLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGP-------WERRLRTLIEQYQLEDVVEMPGFKPSHEVKA 294 (406)
T ss_pred CeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECch-------hHHHHHHHHHHcCCCCeEEEeCCCCHHHHHH
Confidence 3556666777532 23334444444444344443 3344321 1122222 1 236788889999864
Q ss_pred hhcCCCcceeeec---------cCh-hhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHH
Q 012217 340 VLKHPSIGGFLTH---------CGW-NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKL 409 (468)
Q Consensus 340 il~~~~~~~~v~h---------gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~a 409 (468)
++..+++ ||.- =|. ++++||+++|+|+|+....+ ....+ +.-..|+.+. .-+.++++++
T Consensus 295 ~l~~aDv--~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g----~~E~v-~~~~~G~lv~----~~d~~~la~a 363 (406)
T PRK15427 295 MLDDADV--FLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG----IPELV-EADKSGWLVP----ENDAQALAQR 363 (406)
T ss_pred HHHhCCE--EEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC----chhhh-cCCCceEEeC----CCCHHHHHHH
Confidence 7778888 6642 244 57899999999999975432 33344 4435677665 3479999999
Q ss_pred HHHHhc-Cch-HHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHH
Q 012217 410 VREMME-GEK-GKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEIL 455 (468)
Q Consensus 410 v~~~l~-~~~-~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~~~~~ 455 (468)
|.++++ |++ .+++.+++++..+. .-+.+...+++.+.+.
T Consensus 364 i~~l~~~d~~~~~~~~~~ar~~v~~-------~f~~~~~~~~l~~~~~ 404 (406)
T PRK15427 364 LAAFSQLDTDELAPVVKRAREKVET-------DFNQQVINRELASLLQ 404 (406)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHH-------hcCHHHHHHHHHHHHh
Confidence 999998 763 34555555544332 3344555555555443
No 70
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=97.61 E-value=0.00066 Score=67.23 Aligned_cols=127 Identities=14% Similarity=0.129 Sum_probs=83.1
Q ss_pred EEEeecCCcCCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChH---HhhcCCCcce
Q 012217 272 IYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQE---EVLKHPSIGG 348 (468)
Q Consensus 272 v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~---~il~~~~~~~ 348 (468)
.++..|.+.. .+.+..++++++..+.+++++-.+. ..+.+.+...+|+.+.+++|+. .++..+++-+
T Consensus 197 ~il~~G~~~~--~K~~~~li~a~~~~~~~l~ivG~g~--------~~~~l~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v 266 (351)
T cd03804 197 YYLSVGRLVP--YKRIDLAIEAFNKLGKRLVVIGDGP--------ELDRLRAKAGPNVTFLGRVSDEELRDLYARARAFL 266 (351)
T ss_pred EEEEEEcCcc--ccChHHHHHHHHHCCCcEEEEECCh--------hHHHHHhhcCCCEEEecCCCHHHHHHHHHhCCEEE
Confidence 3455677653 2345667777777776655443321 1123333456899999999984 4788888833
Q ss_pred eeeccCh-hhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCc
Q 012217 349 FLTHCGW-NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGE 417 (468)
Q Consensus 349 ~v~hgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~ 417 (468)
+-+.-|+ .++.||+++|+|+|+....+ ....+ +.-+.|+.+. .-+.++++++|.++++|+
T Consensus 267 ~ps~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i-~~~~~G~~~~----~~~~~~la~~i~~l~~~~ 327 (351)
T cd03804 267 FPAEEDFGIVPVEAMASGTPVIAYGKGG----ALETV-IDGVTGILFE----EQTVESLAAAVERFEKNE 327 (351)
T ss_pred ECCcCCCCchHHHHHHcCCCEEEeCCCC----Cccee-eCCCCEEEeC----CCCHHHHHHHHHHHHhCc
Confidence 2234444 46789999999999986533 33334 4435787775 247888999999999876
No 71
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=97.59 E-value=0.049 Score=52.73 Aligned_cols=130 Identities=12% Similarity=0.125 Sum_probs=74.6
Q ss_pred CceEEEeecCCcCC-CHHHHHHHHHHHHcC--CCCEEEEEcCCCCCCCCCCCchhHH---HH--hhcCceEecccCh-HH
Q 012217 269 KSVIYVNFGSFIFM-NKQQLIEVAMGLVNS--NHPFLWIIRPDLVTGETADLPAEFE---VK--AKEKGFVASWCPQ-EE 339 (468)
Q Consensus 269 ~~vv~vs~GS~~~~-~~~~~~~~~~~l~~~--~~~~lw~~~~~~~~~~~~~~~~~~~---~~--~~~~~~v~~~~p~-~~ 339 (468)
+..+++..|+.... ..+.+.+.+..+... +..+++ ++... ....+. ++ ..+++.+.+|.+. ..
T Consensus 188 ~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i-~G~~~-------~~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 259 (353)
T cd03811 188 DGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVI-LGDGP-------LREELEALAKELGLADRVHFLGFQSNPYP 259 (353)
T ss_pred CceEEEEEecchhhcChHHHHHHHHHhhhcCCCceEEE-EcCCc-------cHHHHHHHHHhcCCCccEEEecccCCHHH
Confidence 34777888887632 234444444444443 334433 33221 111111 11 2356777787765 46
Q ss_pred hhcCCCcceeeec----cChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHH---HHHHHH
Q 012217 340 VLKHPSIGGFLTH----CGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEV---EKLVRE 412 (468)
Q Consensus 340 il~~~~~~~~v~h----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l---~~av~~ 412 (468)
++..+++ +|.- |.-+++.||+++|+|+|+.... .....+ +..+.|+.+. .-+.+.+ .+++..
T Consensus 260 ~~~~~d~--~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i-~~~~~g~~~~----~~~~~~~~~~~~~i~~ 328 (353)
T cd03811 260 YLKAADL--FVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREIL-EDGENGLLVP----VGDEAALAAAALALLD 328 (353)
T ss_pred HHHhCCE--EEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHh-cCCCceEEEC----CCCHHHHHHHHHHHHh
Confidence 8888888 5532 2246899999999999986443 445555 5546787765 3466676 455555
Q ss_pred HhcCc
Q 012217 413 MMEGE 417 (468)
Q Consensus 413 ~l~~~ 417 (468)
++.++
T Consensus 329 ~~~~~ 333 (353)
T cd03811 329 LLLDP 333 (353)
T ss_pred ccCCh
Confidence 55555
No 72
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=97.53 E-value=0.0033 Score=62.64 Aligned_cols=144 Identities=17% Similarity=0.245 Sum_probs=84.5
Q ss_pred ceEEEeecCCcCCCHHHHHHHHHHHHcCCCCE-EEEEcCCCCCCCCCCCchhHHHH-----hhcCceEecccCh--H---
Q 012217 270 SVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPF-LWIIRPDLVTGETADLPAEFEVK-----AKEKGFVASWCPQ--E--- 338 (468)
Q Consensus 270 ~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~-lw~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~p~--~--- 338 (468)
..+++..|.+.....+.+..+++++......+ ++.+|.+. ..+.+.+. +++++.+.+|.++ .
T Consensus 180 ~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~ivG~g~-------~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~ 252 (359)
T PRK09922 180 PAVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLHIIGDGS-------DFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQ 252 (359)
T ss_pred CcEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEEEEeCCc-------cHHHHHHHHHHcCCCCeEEEecccCCcHHHHH
Confidence 35667777765323344566777776543333 33344321 11222221 2467888888743 2
Q ss_pred HhhcCCCcceeeecc---C-hhhHHHHHhcCCcEEecC-CCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHH
Q 012217 339 EVLKHPSIGGFLTHC---G-WNSIVESLCSGVPMICWP-FTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREM 413 (468)
Q Consensus 339 ~il~~~~~~~~v~hg---G-~~s~~eal~~GvP~v~~P-~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~ 413 (468)
..+..+++ +|... | -+++.||+++|+|+|+.- ..+ ....+ +.-..|.-+. .-+.++++++|.++
T Consensus 253 ~~~~~~d~--~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv-~~~~~G~lv~----~~d~~~la~~i~~l 321 (359)
T PRK09922 253 QKIKNVSA--LLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDII-KPGLNGELYT----PGNIDEFVGKLNKV 321 (359)
T ss_pred HHHhcCcE--EEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHc-cCCCceEEEC----CCCHHHHHHHHHHH
Confidence 24455666 55432 2 479999999999999975 322 22233 5435677665 35899999999999
Q ss_pred hcCch---HHHHHHHHHHHHH
Q 012217 414 MEGEK---GKQMRNKAMEWKG 431 (468)
Q Consensus 414 l~~~~---~~~~~~~a~~l~~ 431 (468)
++|++ ...++++++++.+
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~ 342 (359)
T PRK09922 322 ISGEVKYQHDAIPNSIERFYE 342 (359)
T ss_pred HhCcccCCHHHHHHHHHHhhH
Confidence 98874 2344444444444
No 73
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=97.52 E-value=0.0022 Score=65.56 Aligned_cols=87 Identities=15% Similarity=0.182 Sum_probs=61.8
Q ss_pred HHhhcCCCcceeee----ccChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHH
Q 012217 338 EEVLKHPSIGGFLT----HCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREM 413 (468)
Q Consensus 338 ~~il~~~~~~~~v~----hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~ 413 (468)
..++..+++ +|+. =+|..++.||+++|+|+|+-|..+++......+ .+.|.++... +.++++++|.++
T Consensus 314 ~~~y~~aDi-~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~-~~~g~~~~~~------d~~~La~~l~~l 385 (425)
T PRK05749 314 GLLYAIADI-AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERL-LQAGAAIQVE------DAEDLAKAVTYL 385 (425)
T ss_pred HHHHHhCCE-EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHH-HHCCCeEEEC------CHHHHHHHHHHH
Confidence 357777776 2331 134446999999999999999988887777666 3446665543 689999999999
Q ss_pred hcCch-HHHHHHHHHHHHHH
Q 012217 414 MEGEK-GKQMRNKAMEWKGL 432 (468)
Q Consensus 414 l~~~~-~~~~~~~a~~l~~~ 432 (468)
++|++ .++|.++|++..+.
T Consensus 386 l~~~~~~~~m~~~a~~~~~~ 405 (425)
T PRK05749 386 LTDPDARQAYGEAGVAFLKQ 405 (425)
T ss_pred hcCHHHHHHHHHHHHHHHHh
Confidence 98873 24566666655543
No 74
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.45 E-value=0.0011 Score=67.17 Aligned_cols=121 Identities=19% Similarity=0.251 Sum_probs=67.4
Q ss_pred CCCceEEEeecCCcCCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHh------hcCceEecccChHH-
Q 012217 267 EPKSVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKA------KEKGFVASWCPQEE- 339 (468)
Q Consensus 267 ~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~p~~~- 339 (468)
+++.++|.+|.+....+++.+...++-|++.+...+|..+.... -.+.+.++. ++++.+.++.++.+
T Consensus 282 p~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~------~~~~l~~~~~~~Gv~~~Ri~f~~~~~~~eh 355 (468)
T PF13844_consen 282 PEDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPAS------GEARLRRRFAAHGVDPDRIIFSPVAPREEH 355 (468)
T ss_dssp -SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTT------HHHHHHHHHHHTTS-GGGEEEEE---HHHH
T ss_pred CCCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHH------HHHHHHHHHHHcCCChhhEEEcCCCCHHHH
Confidence 34569999999999999999999999999999999999875421 011222211 36777777777654
Q ss_pred --hhcCCCcceee---eccChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEe
Q 012217 340 --VLKHPSIGGFL---THCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEIN 395 (468)
Q Consensus 340 --il~~~~~~~~v---~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~ 395 (468)
.+...++ ++ ..+|.+|++|||+.|||+|.+|--.=....+.-+...+|+.-.+.
T Consensus 356 l~~~~~~DI--~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA 414 (468)
T PF13844_consen 356 LRRYQLADI--CLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIA 414 (468)
T ss_dssp HHHGGG-SE--EE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-
T ss_pred HHHhhhCCE--EeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcC
Confidence 4455666 54 356889999999999999999943222223322224556554443
No 75
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=97.44 E-value=0.008 Score=58.82 Aligned_cols=132 Identities=12% Similarity=0.144 Sum_probs=82.1
Q ss_pred CceEEEeecCCcCC-CHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHH-----hhcCceEecccChH---H
Q 012217 269 KSVIYVNFGSFIFM-NKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVK-----AKEKGFVASWCPQE---E 339 (468)
Q Consensus 269 ~~vv~vs~GS~~~~-~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~p~~---~ 339 (468)
+..+++..|+.... ..+.+.+.++.+.+.+..+.+.+-+... ....+.+. ..+|+.+.+++++. .
T Consensus 201 ~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~------~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 274 (377)
T cd03798 201 DKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGP------LREALEALAAELGLEDRVTFLGAVPHEEVPA 274 (377)
T ss_pred CceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCc------chHHHHHHHHhcCCcceEEEeCCCCHHHHHH
Confidence 34677777887542 3444555555554433344444432210 11122211 24678888999875 4
Q ss_pred hhcCCCcceeeec----cChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhc
Q 012217 340 VLKHPSIGGFLTH----CGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMME 415 (468)
Q Consensus 340 il~~~~~~~~v~h----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~ 415 (468)
++..+++ +|.. +.-+++.||+++|+|+|+-+.. .....+ +..+.|..+. .-+.+++.++|.++++
T Consensus 275 ~~~~ad~--~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~----~~~~~~-~~~~~g~~~~----~~~~~~l~~~i~~~~~ 343 (377)
T cd03798 275 YYAAADV--FVLPSLREGFGLVLLEAMACGLPVVATDVG----GIPEII-TDGENGLLVP----PGDPEALAEAILRLLA 343 (377)
T ss_pred HHHhcCe--eecchhhccCChHHHHHHhcCCCEEEecCC----ChHHHh-cCCcceeEEC----CCCHHHHHHHHHHHhc
Confidence 6778887 5522 3457899999999999987543 334445 4545676665 4589999999999998
Q ss_pred Cc
Q 012217 416 GE 417 (468)
Q Consensus 416 ~~ 417 (468)
++
T Consensus 344 ~~ 345 (377)
T cd03798 344 DP 345 (377)
T ss_pred Cc
Confidence 87
No 76
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=97.40 E-value=0.012 Score=58.22 Aligned_cols=99 Identities=16% Similarity=0.234 Sum_probs=72.3
Q ss_pred CceEecccChHH-hhcCCCc----ceeeeccChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcc
Q 012217 328 KGFVASWCPQEE-VLKHPSI----GGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVI 402 (468)
Q Consensus 328 ~~~v~~~~p~~~-il~~~~~----~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~ 402 (468)
++.+.+-+--.. ++.-.++ |-|+-+||.| ..|++++|+|+|.=|+...|.+-++++ ...|.|+.++ +
T Consensus 301 dV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~~~l-~~~ga~~~v~------~ 372 (419)
T COG1519 301 DVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDIAERL-LQAGAGLQVE------D 372 (419)
T ss_pred cEEEEecHhHHHHHHhhccEEEECCcccCCCCCC-hhhHHHcCCCEEeCCccccHHHHHHHH-HhcCCeEEEC------C
Confidence 555555444333 3333333 2355688887 689999999999999999999999999 6669999987 3
Q ss_pred hhHHHHHHHHHhcCch-HHHHHHHHHHHHHHHH
Q 012217 403 RNEVEKLVREMMEGEK-GKQMRNKAMEWKGLAE 434 (468)
Q Consensus 403 ~~~l~~av~~~l~~~~-~~~~~~~a~~l~~~~~ 434 (468)
++.+.+++..+++|++ ...|.+++.++-+..+
T Consensus 373 ~~~l~~~v~~l~~~~~~r~~~~~~~~~~v~~~~ 405 (419)
T COG1519 373 ADLLAKAVELLLADEDKREAYGRAGLEFLAQNR 405 (419)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhh
Confidence 8899999999988763 3566666666655544
No 77
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=97.39 E-value=0.0063 Score=60.39 Aligned_cols=93 Identities=14% Similarity=0.154 Sum_probs=65.6
Q ss_pred hcCceEecccChHH---hhcCCCcceeeecc----------ChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEE
Q 012217 326 KEKGFVASWCPQEE---VLKHPSIGGFLTHC----------GWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGM 392 (468)
Q Consensus 326 ~~~~~v~~~~p~~~---il~~~~~~~~v~hg----------G~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~ 392 (468)
.+++.+.+++|+.+ ++..+++ +|.-. --+++.||+++|+|+|+-+.. .+...+ ...+.|.
T Consensus 244 ~~~v~~~g~~~~~~l~~~~~~ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~----~~~e~i-~~~~~g~ 316 (367)
T cd05844 244 GGRVTFLGAQPHAEVRELMRRARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHG----GIPEAV-EDGETGL 316 (367)
T ss_pred CCeEEECCCCCHHHHHHHHHhCCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCC----Cchhhe-ecCCeeE
Confidence 46788888988754 5888888 55322 247899999999999987654 355555 4447787
Q ss_pred EEeCCCCCcchhHHHHHHHHHhcCch-HHHHHHHHHHH
Q 012217 393 EINGDDEDVIRNEVEKLVREMMEGEK-GKQMRNKAMEW 429 (468)
Q Consensus 393 ~~~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l 429 (468)
.+. .-+.+++.++|.++++|++ ..+++.++++.
T Consensus 317 ~~~----~~d~~~l~~~i~~l~~~~~~~~~~~~~a~~~ 350 (367)
T cd05844 317 LVP----EGDVAALAAALGRLLADPDLRARMGAAGRRR 350 (367)
T ss_pred EEC----CCCHHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 765 3478999999999998773 23455555444
No 78
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=97.36 E-value=0.0041 Score=54.60 Aligned_cols=146 Identities=20% Similarity=0.232 Sum_probs=87.1
Q ss_pred CCceEEEeecCCcCC-CHHHHHHHHHHHHc--CCCCEEEEEcCCCCCCCCCCCchhHHH--HhhcCceEecccCh---HH
Q 012217 268 PKSVIYVNFGSFIFM-NKQQLIEVAMGLVN--SNHPFLWIIRPDLVTGETADLPAEFEV--KAKEKGFVASWCPQ---EE 339 (468)
Q Consensus 268 ~~~vv~vs~GS~~~~-~~~~~~~~~~~l~~--~~~~~lw~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~p~---~~ 339 (468)
.+..+++..|..... ..+.+.+++.-+.. ...-.++.++.... ...+ ....+ ...+++.+..+.++ ..
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~---~~~~-~~~~~~~~~~~~i~~~~~~~~~~l~~ 88 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEY---KKEL-KNLIEKLNLKENIIFLGYVPDDELDE 88 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCH---HHHH-HHHHHHTTCGTTEEEEESHSHHHHHH
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccccc---cccc-cccccccccccccccccccccccccc
Confidence 445777788887643 34444444444432 23334455552200 0000 01111 13468888888873 45
Q ss_pred hhcCCCcceeeec----cChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhc
Q 012217 340 VLKHPSIGGFLTH----CGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMME 415 (468)
Q Consensus 340 il~~~~~~~~v~h----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~ 415 (468)
++..+++ +|+. +..+++.||+++|+|+|+. |...+...+ .....|..+.. .+.+++.++|.++++
T Consensus 89 ~~~~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~----~~~~~~e~~-~~~~~g~~~~~----~~~~~l~~~i~~~l~ 157 (172)
T PF00534_consen 89 LYKSSDI--FVSPSRNEGFGLSLLEAMACGCPVIAS----DIGGNNEII-NDGVNGFLFDP----NDIEELADAIEKLLN 157 (172)
T ss_dssp HHHHTSE--EEE-BSSBSS-HHHHHHHHTT-EEEEE----SSTHHHHHS-GTTTSEEEEST----TSHHHHHHHHHHHHH
T ss_pred cccccee--ccccccccccccccccccccccceeec----cccCCceee-ccccceEEeCC----CCHHHHHHHHHHHHC
Confidence 8888888 7766 4567999999999999986 455555555 55467888873 399999999999998
Q ss_pred Cch-HHHHHHHHHH
Q 012217 416 GEK-GKQMRNKAME 428 (468)
Q Consensus 416 ~~~-~~~~~~~a~~ 428 (468)
+++ .+.+.+++++
T Consensus 158 ~~~~~~~l~~~~~~ 171 (172)
T PF00534_consen 158 DPELRQKLGKNARE 171 (172)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhcC
Confidence 762 2344444443
No 79
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=97.35 E-value=0.0068 Score=59.62 Aligned_cols=144 Identities=16% Similarity=0.208 Sum_probs=84.7
Q ss_pred CceEEEeecCCcCC-CHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHH---HH--hhcCceEecccChH---H
Q 012217 269 KSVIYVNFGSFIFM-NKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFE---VK--AKEKGFVASWCPQE---E 339 (468)
Q Consensus 269 ~~vv~vs~GS~~~~-~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~---~~--~~~~~~v~~~~p~~---~ 339 (468)
+++.++.+|+.... ..+.+.+.+..+...+..+-+.+-+.. . ....+. ++ .++|+.+.+++|+. .
T Consensus 178 ~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~---~---~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~ 251 (355)
T cd03799 178 EPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDG---P---LRDELEALIAELGLEDRVTLLGAKSQEEVRE 251 (355)
T ss_pred CCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECC---c---cHHHHHHHHHHcCCCCeEEECCcCChHHHHH
Confidence 34666777876532 344455555555444334333332211 0 111111 11 24688888999764 4
Q ss_pred hhcCCCcceeeec----------cChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHH
Q 012217 340 VLKHPSIGGFLTH----------CGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKL 409 (468)
Q Consensus 340 il~~~~~~~~v~h----------gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~a 409 (468)
++.++++ +|.- |.-+++.||+++|+|+|+.+..+ ....+ +....|..+. .-+.+++.++
T Consensus 252 ~~~~adi--~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i-~~~~~g~~~~----~~~~~~l~~~ 320 (355)
T cd03799 252 LLRAADL--FVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELV-EDGETGLLVP----PGDPEALADA 320 (355)
T ss_pred HHHhCCE--EEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhh-hCCCceEEeC----CCCHHHHHHH
Confidence 7778888 5552 22378999999999999975532 22333 4434777765 3488999999
Q ss_pred HHHHhcCch-HHHHHHHHHHH
Q 012217 410 VREMMEGEK-GKQMRNKAMEW 429 (468)
Q Consensus 410 v~~~l~~~~-~~~~~~~a~~l 429 (468)
|.+++++++ ..++.++|++.
T Consensus 321 i~~~~~~~~~~~~~~~~a~~~ 341 (355)
T cd03799 321 IERLLDDPELRREMGEAGRAR 341 (355)
T ss_pred HHHHHhCHHHHHHHHHHHHHH
Confidence 999998773 23444554443
No 80
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=97.19 E-value=0.021 Score=56.07 Aligned_cols=94 Identities=15% Similarity=0.292 Sum_probs=62.8
Q ss_pred hcCceEec-ccChH---HhhcCCCcceeee--c----cChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEe
Q 012217 326 KEKGFVAS-WCPQE---EVLKHPSIGGFLT--H----CGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEIN 395 (468)
Q Consensus 326 ~~~~~v~~-~~p~~---~il~~~~~~~~v~--h----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~ 395 (468)
.+++.+.+ |+|+. .++..+++ +|. + +-.+++.||+++|+|+|+.+..+ ...+ ..-+.|..+.
T Consensus 246 ~~~v~~~~~~~~~~~~~~~~~~ad~--~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i-~~~~~g~~~~ 317 (366)
T cd03822 246 ADRVIFINRYLPDEELPELFSAADV--VVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEV-LDGGTGLLVP 317 (366)
T ss_pred CCcEEEecCcCCHHHHHHHHhhcCE--EEecccccccccchHHHHHHHcCCCEEecCCCC-----hhee-eeCCCcEEEc
Confidence 35777775 58864 57778887 552 2 23468899999999999987654 2333 3336677665
Q ss_pred CCCCCcchhHHHHHHHHHhcCch-HHHHHHHHHHHHH
Q 012217 396 GDDEDVIRNEVEKLVREMMEGEK-GKQMRNKAMEWKG 431 (468)
Q Consensus 396 ~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l~~ 431 (468)
.-+.+++++++.++++|++ ..++++++++..+
T Consensus 318 ----~~d~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~ 350 (366)
T cd03822 318 ----PGDPAALAEAIRRLLADPELAQALRARAREYAR 350 (366)
T ss_pred ----CCCHHHHHHHHHHHHcChHHHHHHHHHHHHHHh
Confidence 2468999999999998752 2345555554443
No 81
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=97.14 E-value=0.002 Score=54.14 Aligned_cols=127 Identities=17% Similarity=0.232 Sum_probs=68.1
Q ss_pred eEEEeecCCcC-CCHHHHHH-HHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccCh-HHhhcCCCcc
Q 012217 271 VIYVNFGSFIF-MNKQQLIE-VAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQ-EEVLKHPSIG 347 (468)
Q Consensus 271 vv~vs~GS~~~-~~~~~~~~-~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~-~~il~~~~~~ 347 (468)
+.++++|+... ...+.+.+ +++.+.+....+-+.+-+.. |+.+.+...+|+.+.+|++. .+++..+++.
T Consensus 3 ~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~--------~~~l~~~~~~~v~~~g~~~e~~~~l~~~dv~ 74 (135)
T PF13692_consen 3 LYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNG--------PDELKRLRRPNVRFHGFVEELPEILAAADVG 74 (135)
T ss_dssp EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECES--------S-HHCCHHHCTEEEE-S-HHHHHHHHC-SEE
T ss_pred ccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCC--------HHHHHHhcCCCEEEcCCHHHHHHHHHhCCEE
Confidence 44555666543 23444444 66666544444544443221 11221112468999998864 4588999996
Q ss_pred eeeecc--C-hhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcC
Q 012217 348 GFLTHC--G-WNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEG 416 (468)
Q Consensus 348 ~~v~hg--G-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~ 416 (468)
...+.. | -+++.|++++|+|+|+.+.. +..+.+..+.|..+. -+++++.++|.++++|
T Consensus 75 l~p~~~~~~~~~k~~e~~~~G~pvi~~~~~------~~~~~~~~~~~~~~~-----~~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 75 LIPSRFNEGFPNKLLEAMAAGKPVIASDNG------AEGIVEEDGCGVLVA-----NDPEELAEAIERLLND 135 (135)
T ss_dssp EE-BSS-SCC-HHHHHHHCTT--EEEEHHH------CHCHS---SEEEE-T-----T-HHHHHHHHHHHHH-
T ss_pred EEEeeCCCcCcHHHHHHHHhCCCEEECCcc------hhhheeecCCeEEEC-----CCHHHHHHHHHHHhcC
Confidence 555432 2 48999999999999998761 222224447776663 3899999999999865
No 82
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=97.13 E-value=0.018 Score=56.68 Aligned_cols=127 Identities=11% Similarity=0.157 Sum_probs=74.6
Q ss_pred CceEEEeecCCcCC-CHHHHHHHHHHHHcC--CCCEEEEEcCCCCCCCCCCCchhHHHH-----hhcCceEecccCh-HH
Q 012217 269 KSVIYVNFGSFIFM-NKQQLIEVAMGLVNS--NHPFLWIIRPDLVTGETADLPAEFEVK-----AKEKGFVASWCPQ-EE 339 (468)
Q Consensus 269 ~~vv~vs~GS~~~~-~~~~~~~~~~~l~~~--~~~~lw~~~~~~~~~~~~~~~~~~~~~-----~~~~~~v~~~~p~-~~ 339 (468)
+..+++..|+.... ..+.+.+.+..+.+. +.+|+++-.+. ..+.+.+. ..+|+.+.++..+ ..
T Consensus 187 ~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~--------~~~~~~~~~~~~~~~~~v~~~g~~~~~~~ 258 (360)
T cd04951 187 DTFVILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGP--------LRATLERLIKALGLSNRVKLLGLRDDIAA 258 (360)
T ss_pred CCEEEEEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCC--------cHHHHHHHHHhcCCCCcEEEecccccHHH
Confidence 34777888876532 233333333333332 35555543221 11222221 2356777776654 46
Q ss_pred hhcCCCcceeeeccC----hhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhc
Q 012217 340 VLKHPSIGGFLTHCG----WNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMME 415 (468)
Q Consensus 340 il~~~~~~~~v~hgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~ 415 (468)
++..+++ +|.-.. -+++.||+++|+|+|+. |...+...+ +. .|..+. .-+.+++++++.++++
T Consensus 259 ~~~~ad~--~v~~s~~e~~~~~~~Ea~a~G~PvI~~----~~~~~~e~i-~~--~g~~~~----~~~~~~~~~~i~~ll~ 325 (360)
T cd04951 259 YYNAADL--FVLSSAWEGFGLVVAEAMACELPVVAT----DAGGVREVV-GD--SGLIVP----ISDPEALANKIDEILK 325 (360)
T ss_pred HHHhhce--EEecccccCCChHHHHHHHcCCCEEEe----cCCChhhEe-cC--CceEeC----CCCHHHHHHHHHHHHh
Confidence 8888887 554332 46899999999999985 444555555 44 344443 2478999999999984
Q ss_pred C
Q 012217 416 G 416 (468)
Q Consensus 416 ~ 416 (468)
+
T Consensus 326 ~ 326 (360)
T cd04951 326 M 326 (360)
T ss_pred C
Confidence 3
No 83
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=97.11 E-value=0.028 Score=54.94 Aligned_cols=78 Identities=13% Similarity=0.244 Sum_probs=54.4
Q ss_pred cCceEecccCh-HHhhcCCCcceeeeccCh----hhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCc
Q 012217 327 EKGFVASWCPQ-EEVLKHPSIGGFLTHCGW----NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDV 401 (468)
Q Consensus 327 ~~~~v~~~~p~-~~il~~~~~~~~v~hgG~----~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~ 401 (468)
+++.+.+...+ ..++..+++ +|....+ +++.||+++|+|+|+.. ...+...+ +. .|..+. .-
T Consensus 251 ~~v~~~g~~~~~~~~~~~adi--~v~ps~~e~~~~~~~Ea~a~g~PvI~~~----~~~~~e~~-~~--~g~~~~----~~ 317 (365)
T cd03807 251 DKVILLGERSDVPALLNALDV--FVLSSLSEGFPNVLLEAMACGLPVVATD----VGDNAELV-GD--TGFLVP----PG 317 (365)
T ss_pred ceEEEccccccHHHHHHhCCE--EEeCCccccCCcHHHHHHhcCCCEEEcC----CCChHHHh-hc--CCEEeC----CC
Confidence 45555554433 468888888 7765443 79999999999999854 34444444 33 455554 23
Q ss_pred chhHHHHHHHHHhcCc
Q 012217 402 IRNEVEKLVREMMEGE 417 (468)
Q Consensus 402 ~~~~l~~av~~~l~~~ 417 (468)
+.+++.++|.++++++
T Consensus 318 ~~~~l~~~i~~l~~~~ 333 (365)
T cd03807 318 DPEALAEAIEALLADP 333 (365)
T ss_pred CHHHHHHHHHHHHhCh
Confidence 6899999999999876
No 84
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=97.09 E-value=0.021 Score=59.48 Aligned_cols=102 Identities=16% Similarity=0.174 Sum_probs=68.2
Q ss_pred cCceEecccChHHhhcCCCcceeee---ccCh-hhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcc
Q 012217 327 EKGFVASWCPQEEVLKHPSIGGFLT---HCGW-NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVI 402 (468)
Q Consensus 327 ~~~~v~~~~p~~~il~~~~~~~~v~---hgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~ 402 (468)
+++...++.+...++..+++ ||. .=|+ .+++||+++|+|+|+.-..+ .+...+ +.-..|.-+...++.-+
T Consensus 376 ~~V~f~G~~~~~~~~~~adv--~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~---G~~eiI-~~g~nG~lv~~~~~~~d 449 (500)
T TIGR02918 376 DYIHLKGHRNLSEVYKDYEL--YLSASTSEGFGLTLMEAVGSGLGMIGFDVNY---GNPTFI-EDNKNGYLIPIDEEEDD 449 (500)
T ss_pred CeEEEcCCCCHHHHHHhCCE--EEEcCccccccHHHHHHHHhCCCEEEecCCC---CCHHHc-cCCCCEEEEeCCccccc
Confidence 55777788877889999988 665 2343 68999999999999975421 233334 43245666642111122
Q ss_pred ----hhHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Q 012217 403 ----RNEVEKLVREMMEGEKGKQMRNKAMEWKGLAE 434 (468)
Q Consensus 403 ----~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~ 434 (468)
.++++++|.++++++....|.++|++.++.+.
T Consensus 450 ~~~~~~~la~~I~~ll~~~~~~~~~~~a~~~a~~fs 485 (500)
T TIGR02918 450 EDQIITALAEKIVEYFNSNDIDAFHEYSYQIAEGFL 485 (500)
T ss_pred hhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHhcC
Confidence 78899999999965555677888877666543
No 85
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=97.07 E-value=0.028 Score=56.83 Aligned_cols=93 Identities=12% Similarity=0.153 Sum_probs=65.2
Q ss_pred cCceEecccChH---HhhcCCCcceeee---ccCh-hhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCC
Q 012217 327 EKGFVASWCPQE---EVLKHPSIGGFLT---HCGW-NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDE 399 (468)
Q Consensus 327 ~~~~v~~~~p~~---~il~~~~~~~~v~---hgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~ 399 (468)
+++.+.+++++. .++..+++ ||. +-|+ .++.||+++|+|+|+.... .....+ +..+.|+.+.
T Consensus 283 ~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~----~~~e~i-~~~~~g~~~~---- 351 (405)
T TIGR03449 283 DRVRFLPPRPPEELVHVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAARVG----GLPVAV-ADGETGLLVD---- 351 (405)
T ss_pred ceEEECCCCCHHHHHHHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEecCC----CcHhhh-ccCCceEECC----
Confidence 578888998865 47888888 553 2343 5899999999999997543 333344 4435676665
Q ss_pred CcchhHHHHHHHHHhcCch-HHHHHHHHHHHH
Q 012217 400 DVIRNEVEKLVREMMEGEK-GKQMRNKAMEWK 430 (468)
Q Consensus 400 ~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l~ 430 (468)
.-+.++++++|.+++++++ .+++++++++..
T Consensus 352 ~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~ 383 (405)
T TIGR03449 352 GHDPADWADALARLLDDPRTRIRMGAAAVEHA 383 (405)
T ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 3478999999999998763 245566655543
No 86
>PRK10307 putative glycosyl transferase; Provisional
Probab=97.05 E-value=0.035 Score=56.37 Aligned_cols=114 Identities=14% Similarity=0.164 Sum_probs=73.8
Q ss_pred cCceEecccChHH---hhcCCCcceeeeccCh------hhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCC
Q 012217 327 EKGFVASWCPQEE---VLKHPSIGGFLTHCGW------NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGD 397 (468)
Q Consensus 327 ~~~~v~~~~p~~~---il~~~~~~~~v~hgG~------~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~ 397 (468)
+|+.+.+|+|+.+ ++..+++..+.+..+. +.+.|++++|+|+|+....+. .....+ + +.|+.+.
T Consensus 284 ~~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~--~~~~~i-~--~~G~~~~-- 356 (412)
T PRK10307 284 PNVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGT--ELGQLV-E--GIGVCVE-- 356 (412)
T ss_pred CceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCc--hHHHHH-h--CCcEEeC--
Confidence 4788889998754 7888888555555432 236899999999999865431 112233 3 6777765
Q ss_pred CCCcchhHHHHHHHHHhcCch-HHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHh
Q 012217 398 DEDVIRNEVEKLVREMMEGEK-GKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEILL 456 (468)
Q Consensus 398 ~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~~~~~~ 456 (468)
.-+.++++++|.++++|++ .+.+++++++..+. .-+.....+++++.+.+
T Consensus 357 --~~d~~~la~~i~~l~~~~~~~~~~~~~a~~~~~~-------~fs~~~~~~~~~~~~~~ 407 (412)
T PRK10307 357 --PESVEALVAAIAALARQALLRPKLGTVAREYAER-------TLDKENVLRQFIADIRG 407 (412)
T ss_pred --CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH-------HcCHHHHHHHHHHHHHH
Confidence 3478999999999998763 34666666665432 22334455555554443
No 87
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=97.05 E-value=0.014 Score=58.60 Aligned_cols=92 Identities=11% Similarity=0.073 Sum_probs=63.6
Q ss_pred hcCceEecccChH---HhhcCCCcceeeec---cC-hhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCC
Q 012217 326 KEKGFVASWCPQE---EVLKHPSIGGFLTH---CG-WNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDD 398 (468)
Q Consensus 326 ~~~~~v~~~~p~~---~il~~~~~~~~v~h---gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~ 398 (468)
.+++.+.+++|+. .++..+++ +|.. -| -.++.||+++|+|+|+.-.. .....+ ...+.|..+.
T Consensus 279 ~~~V~f~g~~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~~----~~~e~i-~~~~~g~~~~--- 348 (392)
T cd03805 279 EDQVIFLPSISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNSG----GPLETV-VDGETGFLCE--- 348 (392)
T ss_pred CceEEEeCCCChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECCC----CcHHHh-ccCCceEEeC---
Confidence 3678889999876 46788887 6532 22 25789999999999997442 333344 4435676654
Q ss_pred CCcchhHHHHHHHHHhcCch-HHHHHHHHHHH
Q 012217 399 EDVIRNEVEKLVREMMEGEK-GKQMRNKAMEW 429 (468)
Q Consensus 399 ~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l 429 (468)
. +.++++++|.+++++++ ..++.+++++.
T Consensus 349 -~-~~~~~a~~i~~l~~~~~~~~~~~~~a~~~ 378 (392)
T cd03805 349 -P-TPEEFAEAMLKLANDPDLADRMGAAGRKR 378 (392)
T ss_pred -C-CHHHHHHHHHHHHhChHHHHHHHHHHHHH
Confidence 2 78999999999998773 34565665554
No 88
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=97.01 E-value=0.35 Score=54.04 Aligned_cols=96 Identities=10% Similarity=0.171 Sum_probs=63.8
Q ss_pred cCceEecccChHH---hhcCCC--cceeeec---cCh-hhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCC
Q 012217 327 EKGFVASWCPQEE---VLKHPS--IGGFLTH---CGW-NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGD 397 (468)
Q Consensus 327 ~~~~v~~~~p~~~---il~~~~--~~~~v~h---gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~ 397 (468)
+++.+.+++++.+ ++..++ .++||.- =|+ .++.||+++|+|+|+....+ ....+ +.-..|+.+.
T Consensus 548 g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII-~~g~nGlLVd-- 620 (1050)
T TIGR02468 548 GQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIH-RVLDNGLLVD-- 620 (1050)
T ss_pred CeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHh-ccCCcEEEEC--
Confidence 5677778887754 454442 1237764 243 58899999999999986533 22233 3324577665
Q ss_pred CCCcchhHHHHHHHHHhcCch-HHHHHHHHHHHHH
Q 012217 398 DEDVIRNEVEKLVREMMEGEK-GKQMRNKAMEWKG 431 (468)
Q Consensus 398 ~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l~~ 431 (468)
.-+.++++++|.++++|++ .++|.+++++..+
T Consensus 621 --P~D~eaLA~AL~~LL~Dpelr~~m~~~gr~~v~ 653 (1050)
T TIGR02468 621 --PHDQQAIADALLKLVADKQLWAECRQNGLKNIH 653 (1050)
T ss_pred --CCCHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 3578999999999998874 3566666665543
No 89
>PLN02949 transferase, transferring glycosyl groups
Probab=96.97 E-value=0.58 Score=48.29 Aligned_cols=96 Identities=16% Similarity=0.098 Sum_probs=60.6
Q ss_pred hcCceEecccChHH---hhcCCCcceeee---ccChh-hHHHHHhcCCcEEecCCCCCcccchhhheeec-e-eEEEEeC
Q 012217 326 KEKGFVASWCPQEE---VLKHPSIGGFLT---HCGWN-SIVESLCSGVPMICWPFTGDQPTNGRYVCNEW-G-VGMEING 396 (468)
Q Consensus 326 ~~~~~v~~~~p~~~---il~~~~~~~~v~---hgG~~-s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~-g-~g~~~~~ 396 (468)
.+++.+..++|+.+ +|..+++ +|+ +=|+| ++.||+++|+|+|+....+--. ..+.++- | .|...
T Consensus 334 ~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~---eIV~~~~~g~tG~l~-- 406 (463)
T PLN02949 334 DGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKM---DIVLDEDGQQTGFLA-- 406 (463)
T ss_pred CCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcc---eeeecCCCCcccccC--
Confidence 46788888988654 6778877 663 23333 7999999999999986543110 1111110 1 23222
Q ss_pred CCCCcchhHHHHHHHHHhcC-c-hHHHHHHHHHHHHHH
Q 012217 397 DDEDVIRNEVEKLVREMMEG-E-KGKQMRNKAMEWKGL 432 (468)
Q Consensus 397 ~~~~~~~~~l~~av~~~l~~-~-~~~~~~~~a~~l~~~ 432 (468)
-+.++++++|.+++++ + ..++|.+++++..++
T Consensus 407 ----~~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~ 440 (463)
T PLN02949 407 ----TTVEEYADAILEVLRMRETERLEIAAAARKRANR 440 (463)
T ss_pred ----CCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 1789999999999974 3 234566776665443
No 90
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=96.96 E-value=0.01 Score=58.38 Aligned_cols=127 Identities=11% Similarity=0.167 Sum_probs=74.6
Q ss_pred eEEEeecCCcCC-CHHHHHHHHHHHHcCC--CCEEEEEcCCCCCCCCCCCchhHH-----HHhhcCceEecccChH---H
Q 012217 271 VIYVNFGSFIFM-NKQQLIEVAMGLVNSN--HPFLWIIRPDLVTGETADLPAEFE-----VKAKEKGFVASWCPQE---E 339 (468)
Q Consensus 271 vv~vs~GS~~~~-~~~~~~~~~~~l~~~~--~~~lw~~~~~~~~~~~~~~~~~~~-----~~~~~~~~v~~~~p~~---~ 339 (468)
.+.+..|+.... ..+.+.+.+..+...+ ..+++. +.... ...... ....+++.+.+|+|+. .
T Consensus 196 ~~i~~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~-G~~~~------~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 268 (365)
T cd03809 196 PYFLYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIV-GKRGW------LNEELLARLRELGLGDRVRFLGYVSDEELAA 268 (365)
T ss_pred CeEEEeCCCccccCHHHHHHHHHHHHHhcCCCCEEEe-cCCcc------ccHHHHHHHHHcCCCCeEEECCCCChhHHHH
Confidence 556667777532 3445555555554443 344433 32210 001111 1235688888999875 4
Q ss_pred hhcCCCcceeeec----cChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhc
Q 012217 340 VLKHPSIGGFLTH----CGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMME 415 (468)
Q Consensus 340 il~~~~~~~~v~h----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~ 415 (468)
++..+++ +|.- +..+++.||+++|+|+|+.... .....+ .. .|..+. .-+.+++.++|.++++
T Consensus 269 ~~~~~d~--~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~----~~~e~~-~~--~~~~~~----~~~~~~~~~~i~~l~~ 335 (365)
T cd03809 269 LYRGARA--FVFPSLYEGFGLPVLEAMACGTPVIASNIS----SLPEVA-GD--AALYFD----PLDPEALAAAIERLLE 335 (365)
T ss_pred HHhhhhh--hcccchhccCCCCHHHHhcCCCcEEecCCC----Ccccee-cC--ceeeeC----CCCHHHHHHHHHHHhc
Confidence 6788887 4432 2245899999999999986542 122222 32 344444 2378999999999998
Q ss_pred Cc
Q 012217 416 GE 417 (468)
Q Consensus 416 ~~ 417 (468)
|+
T Consensus 336 ~~ 337 (365)
T cd03809 336 DP 337 (365)
T ss_pred CH
Confidence 87
No 91
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=96.92 E-value=0.0026 Score=52.17 Aligned_cols=107 Identities=20% Similarity=0.183 Sum_probs=65.3
Q ss_pred EEEeecCCcCCCHHHH--HHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCc-eEecc--cCh-HHhhcCCC
Q 012217 272 IYVNFGSFIFMNKQQL--IEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKG-FVASW--CPQ-EEVLKHPS 345 (468)
Q Consensus 272 v~vs~GS~~~~~~~~~--~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~--~p~-~~il~~~~ 345 (468)
+|||-||....-...+ .++.+-.+.-..++|..++... ..| -|+ .+.+| .+- +.+....+
T Consensus 2 ifVTvGstf~~f~rlv~k~e~~el~~~i~e~lIvQyGn~d------~kp--------vagl~v~~F~~~~kiQsli~dar 67 (161)
T COG5017 2 IFVTVGSTFYPFNRLVLKIEVLELTELIQEELIVQYGNGD------IKP--------VAGLRVYGFDKEEKIQSLIHDAR 67 (161)
T ss_pred eEEEecCccchHHHHHhhHHHHHHHHHhhhheeeeecCCC------ccc--------ccccEEEeechHHHHHHHhhcce
Confidence 7899999842111111 1122222233457888888642 111 133 44443 343 34565566
Q ss_pred cceeeeccChhhHHHHHhcCCcEEecCCCC--------CcccchhhheeeceeEEEEe
Q 012217 346 IGGFLTHCGWNSIVESLCSGVPMICWPFTG--------DQPTNGRYVCNEWGVGMEIN 395 (468)
Q Consensus 346 ~~~~v~hgG~~s~~eal~~GvP~v~~P~~~--------DQ~~na~~~~~~~g~g~~~~ 395 (468)
+ +|+|||.||+..++..++|.|++|--. .|..-|..+ .+.+.=+...
T Consensus 68 I--VISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~kl-ae~~~vv~~s 122 (161)
T COG5017 68 I--VISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKL-AEINYVVACS 122 (161)
T ss_pred E--EEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHH-HhcCceEEEc
Confidence 6 999999999999999999999999743 466677777 3445444443
No 92
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=96.85 E-value=0.061 Score=53.83 Aligned_cols=148 Identities=13% Similarity=0.125 Sum_probs=81.2
Q ss_pred ceEEEeecCCcCCCHHHHHHHHHHHHcC--CCCEEEEEcCCCCCCCCCCCchhHHHH---hh---cCceE-ecccChH--
Q 012217 270 SVIYVNFGSFIFMNKQQLIEVAMGLVNS--NHPFLWIIRPDLVTGETADLPAEFEVK---AK---EKGFV-ASWCPQE-- 338 (468)
Q Consensus 270 ~vv~vs~GS~~~~~~~~~~~~~~~l~~~--~~~~lw~~~~~~~~~~~~~~~~~~~~~---~~---~~~~v-~~~~p~~-- 338 (468)
.++++..|..... +.+..++++++.. +..++++.+... ...+.+.+.+. .. +++.. ..++++.
T Consensus 201 ~~~i~~~Grl~~~--Kg~~~li~a~~~l~~~~~l~i~g~g~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 274 (388)
T TIGR02149 201 RPYILFVGRITRQ--KGVPHLLDAVHYIPKDVQVVLCAGAPD----TPEVAEEVRQAVALLDRNRTGIIWINKMLPKEEL 274 (388)
T ss_pred ceEEEEEcccccc--cCHHHHHHHHHHHhhcCcEEEEeCCCC----cHHHHHHHHHHHHHhccccCceEEecCCCCHHHH
Confidence 3566666776532 3345555555543 455555444321 00011112211 11 23443 3567754
Q ss_pred -HhhcCCCcceeeec---cC-hhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCC--CCcchhHHHHHHH
Q 012217 339 -EVLKHPSIGGFLTH---CG-WNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDD--EDVIRNEVEKLVR 411 (468)
Q Consensus 339 -~il~~~~~~~~v~h---gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~--~~~~~~~l~~av~ 411 (468)
.++.++++ ||.= -| -.++.||+++|+|+|+... ..+...+ +.-..|..+...+ ..-..+++.++|.
T Consensus 275 ~~~~~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~~----~~~~e~i-~~~~~G~~~~~~~~~~~~~~~~l~~~i~ 347 (388)
T TIGR02149 275 VELLSNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASAT----GGIPEVV-VDGETGFLVPPDNSDADGFQAELAKAIN 347 (388)
T ss_pred HHHHHhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeCC----CCHHHHh-hCCCceEEcCCCCCcccchHHHHHHHHH
Confidence 46888888 6642 22 3577999999999999754 3344444 4435677775310 0112389999999
Q ss_pred HHhcCch-HHHHHHHHHHHH
Q 012217 412 EMMEGEK-GKQMRNKAMEWK 430 (468)
Q Consensus 412 ~~l~~~~-~~~~~~~a~~l~ 430 (468)
++++|++ .+++.+++++..
T Consensus 348 ~l~~~~~~~~~~~~~a~~~~ 367 (388)
T TIGR02149 348 ILLADPELAKKMGIAGRKRA 367 (388)
T ss_pred HHHhCHHHHHHHHHHHHHHH
Confidence 9998763 245555555543
No 93
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=96.82 E-value=0.0036 Score=61.65 Aligned_cols=147 Identities=12% Similarity=0.052 Sum_probs=86.2
Q ss_pred ceEEEeecCCcCCCHHHHHHHHHHHHcCCCC-EEEEEcCCCCCCCCCCCchhHHHHhhc--CceEecccChHHhhcCCCc
Q 012217 270 SVIYVNFGSFIFMNKQQLIEVAMGLVNSNHP-FLWIIRPDLVTGETADLPAEFEVKAKE--KGFVASWCPQEEVLKHPSI 346 (468)
Q Consensus 270 ~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~-~lw~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~p~~~il~~~~~ 346 (468)
++|.+--||..+--...+-.++++.+..... ..+.+.... . . +.+.+.... ...+.+ .-.+++..+++
T Consensus 168 ~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~-----~-~-~~i~~~~~~~~~~~~~~--~~~~~m~~aDl 238 (347)
T PRK14089 168 GTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFF-----K-G-KDLKEIYGDISEFEISY--DTHKALLEAEF 238 (347)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCC-----c-H-HHHHHHHhcCCCcEEec--cHHHHHHhhhH
Confidence 5899999998643333444333333322111 233332210 0 1 222222221 222332 33568888998
Q ss_pred ceeeeccChhhHHHHHhcCCcEEecCCC--CCcccchhhhee--eceeEEEEeC-----------CCCCcchhHHHHHHH
Q 012217 347 GGFLTHCGWNSIVESLCSGVPMICWPFT--GDQPTNGRYVCN--EWGVGMEING-----------DDEDVIRNEVEKLVR 411 (468)
Q Consensus 347 ~~~v~hgG~~s~~eal~~GvP~v~~P~~--~DQ~~na~~~~~--~~g~g~~~~~-----------~~~~~~~~~l~~av~ 411 (468)
+|+-+|..|+ |++.+|+|+|+ ++- .-|+.||++++. ..|+.--+.. -.+.+|++.|.+++.
T Consensus 239 --al~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEllQ~~~t~~~la~~i~ 314 (347)
T PRK14089 239 --AFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELLQEFVTVENLLKAYK 314 (347)
T ss_pred --HHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCeeehHHHhcCCCcccccCchhhcccCCHHHHHHHHH
Confidence 9999999999 99999999999 553 357889999852 4455433311 125789999999997
Q ss_pred HHhcCchHHHHHHHHHHHHHHH
Q 012217 412 EMMEGEKGKQMRNKAMEWKGLA 433 (468)
Q Consensus 412 ~~l~~~~~~~~~~~a~~l~~~~ 433 (468)
+ ...+ .+++...++.+.+
T Consensus 315 ~-~~~~---~~~~~~~~l~~~l 332 (347)
T PRK14089 315 E-MDRE---KFFKKSKELREYL 332 (347)
T ss_pred H-HHHH---HHHHHHHHHHHHh
Confidence 7 2122 5666666666554
No 94
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=96.81 E-value=0.0065 Score=60.12 Aligned_cols=131 Identities=15% Similarity=0.180 Sum_probs=77.5
Q ss_pred CCCceEEEeecCCcCCC-H---HHHHHHHHHHHcC-CCCEEEEEcCCCCCCCCCCCchhHHHHhh--cCceEecccC---
Q 012217 267 EPKSVIYVNFGSFIFMN-K---QQLIEVAMGLVNS-NHPFLWIIRPDLVTGETADLPAEFEVKAK--EKGFVASWCP--- 336 (468)
Q Consensus 267 ~~~~vv~vs~GS~~~~~-~---~~~~~~~~~l~~~-~~~~lw~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~p--- 336 (468)
.+++.++|++=...... + +++.+++++|.+. +.++||.+.... .....+.+.+. +|+.+++-++
T Consensus 178 ~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p------~~~~~i~~~l~~~~~v~~~~~l~~~~ 251 (346)
T PF02350_consen 178 APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNP------RGSDIIIEKLKKYDNVRLIEPLGYEE 251 (346)
T ss_dssp TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-H------HHHHHHHHHHTT-TTEEEE----HHH
T ss_pred cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCc------hHHHHHHHHhcccCCEEEECCCCHHH
Confidence 46679999985555444 3 4566677777665 778888887331 00112222222 4888876554
Q ss_pred hHHhhcCCCcceeeeccChhhHH-HHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhc
Q 012217 337 QEEVLKHPSIGGFLTHCGWNSIV-ESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMME 415 (468)
Q Consensus 337 ~~~il~~~~~~~~v~hgG~~s~~-eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~ 415 (468)
...+|.++++ +|+..| ++. ||.+.|+|.|.+ -|+...=.-+ +. |..+-+ ..+.++|.++++++++
T Consensus 252 ~l~ll~~a~~--vvgdSs--GI~eEa~~lg~P~v~i---R~~geRqe~r-~~-~~nvlv-----~~~~~~I~~ai~~~l~ 317 (346)
T PF02350_consen 252 YLSLLKNADL--VVGDSS--GIQEEAPSLGKPVVNI---RDSGERQEGR-ER-GSNVLV-----GTDPEAIIQAIEKALS 317 (346)
T ss_dssp HHHHHHHESE--EEESSH--HHHHHGGGGT--EEEC---SSS-S-HHHH-HT-TSEEEE-----TSSHHHHHHHHHHHHH
T ss_pred HHHHHhcceE--EEEcCc--cHHHHHHHhCCeEEEe---cCCCCCHHHH-hh-cceEEe-----CCCHHHHHHHHHHHHh
Confidence 4568889988 999999 666 999999999999 3333222222 22 444443 2689999999999997
Q ss_pred Cc
Q 012217 416 GE 417 (468)
Q Consensus 416 ~~ 417 (468)
+.
T Consensus 318 ~~ 319 (346)
T PF02350_consen 318 DK 319 (346)
T ss_dssp -H
T ss_pred Ch
Confidence 63
No 95
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=96.72 E-value=0.076 Score=52.98 Aligned_cols=92 Identities=12% Similarity=0.127 Sum_probs=60.4
Q ss_pred cCceEecccCh-HHhhcCCCcceee--ec--cChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCc
Q 012217 327 EKGFVASWCPQ-EEVLKHPSIGGFL--TH--CGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDV 401 (468)
Q Consensus 327 ~~~~v~~~~p~-~~il~~~~~~~~v--~h--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~ 401 (468)
.++.+.++..+ ..++..+++ +| ++ |--+++.||+++|+|+|+.... .+...+ +.-..|..+. .-
T Consensus 255 ~~v~~~g~~~~~~~~~~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~----g~~e~i-~~~~~g~~~~----~~ 323 (374)
T TIGR03088 255 HLVWLPGERDDVPALMQALDL--FVLPSLAEGISNTILEAMASGLPVIATAVG----GNPELV-QHGVTGALVP----PG 323 (374)
T ss_pred ceEEEcCCcCCHHHHHHhcCE--EEeccccccCchHHHHHHHcCCCEEEcCCC----CcHHHh-cCCCceEEeC----CC
Confidence 34555554333 568888888 55 33 3346899999999999997653 344444 4435676665 34
Q ss_pred chhHHHHHHHHHhcCch-HHHHHHHHHHH
Q 012217 402 IRNEVEKLVREMMEGEK-GKQMRNKAMEW 429 (468)
Q Consensus 402 ~~~~l~~av~~~l~~~~-~~~~~~~a~~l 429 (468)
+.++++++|.+++++++ ...+.+++++.
T Consensus 324 d~~~la~~i~~l~~~~~~~~~~~~~a~~~ 352 (374)
T TIGR03088 324 DAVALARALQPYVSDPAARRAHGAAGRAR 352 (374)
T ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 78999999999998762 23444455443
No 96
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=96.72 E-value=0.044 Score=53.93 Aligned_cols=151 Identities=13% Similarity=0.079 Sum_probs=85.7
Q ss_pred CceEEEeecCCcCC-CHHHHHHHHHHHHcCCCCE-EEEEcCCCCCCCCCCCchhHH---H--HhhcCceEecccCh-HHh
Q 012217 269 KSVIYVNFGSFIFM-NKQQLIEVAMGLVNSNHPF-LWIIRPDLVTGETADLPAEFE---V--KAKEKGFVASWCPQ-EEV 340 (468)
Q Consensus 269 ~~vv~vs~GS~~~~-~~~~~~~~~~~l~~~~~~~-lw~~~~~~~~~~~~~~~~~~~---~--~~~~~~~v~~~~p~-~~i 340 (468)
+..+++..|.+... ..+.+.+++..+.+.+..+ ++.+|.+.. ...+...+. . ...+++.+.+|.+. ..+
T Consensus 184 ~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~---~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 260 (355)
T cd03819 184 GKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQG---RRFYYAELLELIKRLGLQDRVTFVGHCSDMPAA 260 (355)
T ss_pred CceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCcc---cchHHHHHHHHHHHcCCcceEEEcCCcccHHHH
Confidence 34677777877533 3455666666666543333 333333211 011111111 1 12357888888543 458
Q ss_pred hcCCCcceeeec--cCh-hhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhc-C
Q 012217 341 LKHPSIGGFLTH--CGW-NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMME-G 416 (468)
Q Consensus 341 l~~~~~~~~v~h--gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~-~ 416 (468)
+..+++..+-++ -|+ +++.||+++|+|+|+.-.. .+...+ ..-+.|..+. .-+.+++.++|..++. +
T Consensus 261 l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~----~~~e~i-~~~~~g~~~~----~~~~~~l~~~i~~~~~~~ 331 (355)
T cd03819 261 YALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHG----GARETV-RPGETGLLVP----PGDAEALAQALDQILSLL 331 (355)
T ss_pred HHhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCC----CcHHHH-hCCCceEEeC----CCCHHHHHHHHHHHHhhC
Confidence 888888333231 233 6999999999999987532 334344 4434677765 3488999999976554 4
Q ss_pred c-hHHHHHHHHHHHHH
Q 012217 417 E-KGKQMRNKAMEWKG 431 (468)
Q Consensus 417 ~-~~~~~~~~a~~l~~ 431 (468)
+ +..+++++|++..+
T Consensus 332 ~~~~~~~~~~a~~~~~ 347 (355)
T cd03819 332 PEGRAKMFAKARMCVE 347 (355)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4 23456666655554
No 97
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=96.67 E-value=0.045 Score=53.38 Aligned_cols=129 Identities=11% Similarity=0.004 Sum_probs=77.2
Q ss_pred eEEEeecCCcCCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHH--hhcCceEecccChH---HhhcCCC
Q 012217 271 VIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVK--AKEKGFVASWCPQE---EVLKHPS 345 (468)
Q Consensus 271 vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~p~~---~il~~~~ 345 (468)
.+.+..|.... .+....+++++++.+.+++++-.... ...+.....+. ..+++.+.+++++. .+++.++
T Consensus 172 ~~i~~~Gr~~~--~Kg~~~li~~~~~~~~~l~i~G~~~~----~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d 245 (335)
T cd03802 172 DYLLFLGRISP--EKGPHLAIRAARRAGIPLKLAGPVSD----PDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNAR 245 (335)
T ss_pred CEEEEEEeecc--ccCHHHHHHHHHhcCCeEEEEeCCCC----HHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCc
Confidence 34455576632 23345677777777777665433220 00011111111 24788889999875 4677888
Q ss_pred cceeee--ccCh-hhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcC
Q 012217 346 IGGFLT--HCGW-NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEG 416 (468)
Q Consensus 346 ~~~~v~--hgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~ 416 (468)
+-++-+ +-|+ .++.||+++|+|+|+.... .+...+ +....|..+. . .+++.++|.+++..
T Consensus 246 ~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~----~~~e~i-~~~~~g~l~~---~---~~~l~~~l~~l~~~ 308 (335)
T cd03802 246 ALLFPILWEEPFGLVMIEAMACGTPVIAFRRG----AVPEVV-EDGVTGFLVD---S---VEELAAAVARADRL 308 (335)
T ss_pred EEEeCCcccCCcchHHHHHHhcCCCEEEeCCC----Cchhhe-eCCCcEEEeC---C---HHHHHHHHHHHhcc
Confidence 732323 2344 5899999999999988553 333344 4423576664 2 99999999988653
No 98
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=96.66 E-value=0.0084 Score=59.10 Aligned_cols=109 Identities=17% Similarity=0.309 Sum_probs=75.8
Q ss_pred hcCceEecccChHHh---hcCCCcceeeecc-------Ch------hhHHHHHhcCCcEEecCCCCCcccchhhheeece
Q 012217 326 KEKGFVASWCPQEEV---LKHPSIGGFLTHC-------GW------NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWG 389 (468)
Q Consensus 326 ~~~~~v~~~~p~~~i---l~~~~~~~~v~hg-------G~------~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g 389 (468)
.+|+...+|+|+.++ |.. +.+.+...- .+ +-+.+.+++|+|+|+++ +...+..| ++.+
T Consensus 206 ~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~----~~~~~~~V-~~~~ 279 (333)
T PRK09814 206 SANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWS----KAAIADFI-VENG 279 (333)
T ss_pred CCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECC----CccHHHHH-HhCC
Confidence 468999999998765 443 443332211 11 22778899999999974 45666666 6668
Q ss_pred eEEEEeCCCCCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHH
Q 012217 390 VGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLV 451 (468)
Q Consensus 390 ~g~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~ 451 (468)
+|+.+. +.+++.+++.++. +++-.+|++|++++++++++ |.-...++.+++
T Consensus 280 ~G~~v~------~~~el~~~l~~~~-~~~~~~m~~n~~~~~~~~~~----g~~~~~~~~~~~ 330 (333)
T PRK09814 280 LGFVVD------SLEELPEIIDNIT-EEEYQEMVENVKKISKLLRN----GYFTKKALVDAI 330 (333)
T ss_pred ceEEeC------CHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHhc----chhHHHHHHHHH
Confidence 998885 4678999998853 45456899999999999996 544445554444
No 99
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=96.61 E-value=0.042 Score=54.72 Aligned_cols=101 Identities=15% Similarity=0.233 Sum_probs=68.8
Q ss_pred hcCceEecccCh-HHhhcCCCcceeeecc-C-hhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcc
Q 012217 326 KEKGFVASWCPQ-EEVLKHPSIGGFLTHC-G-WNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVI 402 (468)
Q Consensus 326 ~~~~~v~~~~p~-~~il~~~~~~~~v~hg-G-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~ 402 (468)
++++.+.++.++ ..++..+++-.+.++. | ..++.||+++|+|+|+..... .....+ +.-..|..+. .-+
T Consensus 260 ~~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v-~~~~~G~lv~----~~d 331 (372)
T cd04949 260 EDYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEII-EDGENGYLVP----KGD 331 (372)
T ss_pred cceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHc-ccCCCceEeC----CCc
Confidence 356677776665 4588888884444443 3 468999999999999964431 123334 4435677665 357
Q ss_pred hhHHHHHHHHHhcCch-HHHHHHHHHHHHHHHH
Q 012217 403 RNEVEKLVREMMEGEK-GKQMRNKAMEWKGLAE 434 (468)
Q Consensus 403 ~~~l~~av~~~l~~~~-~~~~~~~a~~l~~~~~ 434 (468)
.++++++|.+++.|++ .+++.+++++.++.+.
T Consensus 332 ~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~~s 364 (372)
T cd04949 332 IEALAEAIIELLNDPKLLQKFSEAAYENAERYS 364 (372)
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhh
Confidence 9999999999998873 4567777777655543
No 100
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=96.59 E-value=0.095 Score=52.92 Aligned_cols=91 Identities=11% Similarity=0.164 Sum_probs=63.1
Q ss_pred cCceEecccCh-HHhhcCCCcceee--ec--cCh-hhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCC
Q 012217 327 EKGFVASWCPQ-EEVLKHPSIGGFL--TH--CGW-NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDED 400 (468)
Q Consensus 327 ~~~~v~~~~p~-~~il~~~~~~~~v--~h--gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~ 400 (468)
.++.+.+++++ ..++.++++ || ++ .|. +.+.||+++|+|+|+.+...+. +.+.-|.|+.+.
T Consensus 280 ~~V~~~G~v~~~~~~~~~adv--~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~------i~~~~~~g~lv~----- 346 (397)
T TIGR03087 280 PGVTVTGSVADVRPYLAHAAV--AVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEG------IDALPGAELLVA----- 346 (397)
T ss_pred CCeEEeeecCCHHHHHHhCCE--EEecccccCCcccHHHHHHHcCCCEEecCccccc------ccccCCcceEeC-----
Confidence 57888888886 457888888 55 32 354 4699999999999998764321 112235666553
Q ss_pred cchhHHHHHHHHHhcCch-HHHHHHHHHHHH
Q 012217 401 VIRNEVEKLVREMMEGEK-GKQMRNKAMEWK 430 (468)
Q Consensus 401 ~~~~~l~~av~~~l~~~~-~~~~~~~a~~l~ 430 (468)
-+.++++++|.++++|++ .+.+.+++++..
T Consensus 347 ~~~~~la~ai~~ll~~~~~~~~~~~~ar~~v 377 (397)
T TIGR03087 347 ADPADFAAAILALLANPAEREELGQAARRRV 377 (397)
T ss_pred CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 378999999999998873 345556655543
No 101
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=96.53 E-value=0.051 Score=55.78 Aligned_cols=92 Identities=10% Similarity=0.178 Sum_probs=61.4
Q ss_pred hcCceEecccChHHh---hcCC----Ccceeeecc---Ch-hhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEE
Q 012217 326 KEKGFVASWCPQEEV---LKHP----SIGGFLTHC---GW-NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEI 394 (468)
Q Consensus 326 ~~~~~v~~~~p~~~i---l~~~----~~~~~v~hg---G~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~ 394 (468)
.+++.+.+++++.++ +..+ ++ ||... |. .+++||+++|+|+|+.-.. .+...+ +.-..|+.+
T Consensus 316 ~~~V~f~g~~~~~~~~~~~~~a~~~~Dv--~v~pS~~E~fg~~~lEAma~G~PvV~s~~g----g~~eiv-~~~~~G~lv 388 (439)
T TIGR02472 316 YGKVAYPKHHRPDDVPELYRLAARSRGI--FVNPALTEPFGLTLLEAAACGLPIVATDDG----GPRDII-ANCRNGLLV 388 (439)
T ss_pred CceEEecCCCCHHHHHHHHHHHhhcCCE--EecccccCCcccHHHHHHHhCCCEEEeCCC----CcHHHh-cCCCcEEEe
Confidence 356777777776554 5543 55 77644 43 5899999999999998543 344444 443467766
Q ss_pred eCCCCCcchhHHHHHHHHHhcCch-HHHHHHHHHH
Q 012217 395 NGDDEDVIRNEVEKLVREMMEGEK-GKQMRNKAME 428 (468)
Q Consensus 395 ~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~ 428 (468)
. .-+.++++++|.++++|++ .+.|.+++++
T Consensus 389 ~----~~d~~~la~~i~~ll~~~~~~~~~~~~a~~ 419 (439)
T TIGR02472 389 D----VLDLEAIASALEDALSDSSQWQLWSRNGIE 419 (439)
T ss_pred C----CCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 5 3478999999999998863 2344444444
No 102
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=96.53 E-value=0.037 Score=56.49 Aligned_cols=133 Identities=20% Similarity=0.235 Sum_probs=90.0
Q ss_pred CCCceEEEeecCCcCCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHh------hcCceEecccChHH-
Q 012217 267 EPKSVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKA------KEKGFVASWCPQEE- 339 (468)
Q Consensus 267 ~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~p~~~- 339 (468)
+++-+||+||+......++.+..-++-|...+..++|..+++.. +.....+++.. .++.++.+-.|...
T Consensus 427 p~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~----~~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h 502 (620)
T COG3914 427 PEDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDD----AEINARLRDLAEREGVDSERLRFLPPAPNEDH 502 (620)
T ss_pred CCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCc----HHHHHHHHHHHHHcCCChhheeecCCCCCHHH
Confidence 45679999999999999999999999999999999999886421 11111111111 24555555555443
Q ss_pred --hhcCCCcceeee---ccChhhHHHHHhcCCcEEecCCCCCccc--chhhheeeceeEEEEeCCCCCcchhHHHHHHH
Q 012217 340 --VLKHPSIGGFLT---HCGWNSIVESLCSGVPMICWPFTGDQPT--NGRYVCNEWGVGMEINGDDEDVIRNEVEKLVR 411 (468)
Q Consensus 340 --il~~~~~~~~v~---hgG~~s~~eal~~GvP~v~~P~~~DQ~~--na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~ 411 (468)
=+.-.++ |+- -||..|+.|+|..|||+|.++ ++||- |+.-++...|+--.+. .-.++=|+++|+
T Consensus 503 ~a~~~iADl--vLDTyPY~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si~~~agi~e~vA----~s~~dYV~~av~ 573 (620)
T COG3914 503 RARYGIADL--VLDTYPYGGHTTASDALWMGVPVLTRV--GEQFASRNGASIATNAGIPELVA----DSRADYVEKAVA 573 (620)
T ss_pred HHhhchhhe--eeecccCCCccchHHHHHhcCceeeec--cHHHHHhhhHHHHHhcCCchhhc----CCHHHHHHHHHH
Confidence 3334454 654 589999999999999999985 77764 6655555556655554 234566677665
No 103
>PHA01633 putative glycosyl transferase group 1
Probab=96.49 E-value=0.094 Score=51.44 Aligned_cols=103 Identities=15% Similarity=0.123 Sum_probs=63.9
Q ss_pred hhcCceEe---cccChH---HhhcCCCcceeeec---cCh-hhHHHHHhcCCcEEecCC------CCCc------ccchh
Q 012217 325 AKEKGFVA---SWCPQE---EVLKHPSIGGFLTH---CGW-NSIVESLCSGVPMICWPF------TGDQ------PTNGR 382 (468)
Q Consensus 325 ~~~~~~v~---~~~p~~---~il~~~~~~~~v~h---gG~-~s~~eal~~GvP~v~~P~------~~DQ------~~na~ 382 (468)
+++++.+. ++.++. .++..+++ ||.- =|+ ++++||+++|+|+|+--. .+|+ ..+..
T Consensus 199 l~~~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~ 276 (335)
T PHA01633 199 VPANVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVE 276 (335)
T ss_pred CCCcEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHH
Confidence 35677777 455554 56778887 7753 244 578899999999998744 3333 23333
Q ss_pred hhee-eceeEEEEeCCCCCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHH
Q 012217 383 YVCN-EWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLA 433 (468)
Q Consensus 383 ~~~~-~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~ 433 (468)
..++ ..|.|..+. ..++++++++|.+++...+.+....++++.++++
T Consensus 277 ~~~~~~~g~g~~~~----~~d~~~la~ai~~~~~~~~~~~~~~~~~~~a~~f 324 (335)
T PHA01633 277 EYYDKEHGQKWKIH----KFQIEDMANAIILAFELQDREERSMKLKELAKKY 324 (335)
T ss_pred HhcCcccCceeeec----CCCHHHHHHHHHHHHhccChhhhhHHHHHHHHhc
Confidence 3222 336666664 5799999999999965432223344455444443
No 104
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=96.38 E-value=0.08 Score=52.13 Aligned_cols=130 Identities=17% Similarity=0.125 Sum_probs=77.7
Q ss_pred CceEEEeecCCcCC-CHHHHHHHHHHHHcCCCCEEEE-EcCCCCCCCCCCCchhHHH-----HhhcCceEecccCh-HHh
Q 012217 269 KSVIYVNFGSFIFM-NKQQLIEVAMGLVNSNHPFLWI-IRPDLVTGETADLPAEFEV-----KAKEKGFVASWCPQ-EEV 340 (468)
Q Consensus 269 ~~vv~vs~GS~~~~-~~~~~~~~~~~l~~~~~~~lw~-~~~~~~~~~~~~~~~~~~~-----~~~~~~~v~~~~p~-~~i 340 (468)
+..+.+..|++... ..+.+.+.+..+.+.+..+-+. +|.+. ..+.+.+ ...+++.+.++..+ ..+
T Consensus 191 ~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~-------~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 263 (358)
T cd03812 191 DKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLVGDGE-------LEEEIKKKVKELGLEDKVIFLGVRNDVPEL 263 (358)
T ss_pred CCEEEEEEeccccccChHHHHHHHHHHHHhCCCeEEEEEeCCc-------hHHHHHHHHHhcCCCCcEEEecccCCHHHH
Confidence 34677777877532 3445555555554433333333 33221 1112221 12356777776444 568
Q ss_pred hcCCCcceeeec----cChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcC
Q 012217 341 LKHPSIGGFLTH----CGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEG 416 (468)
Q Consensus 341 l~~~~~~~~v~h----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~ 416 (468)
+..+++ +|.- |--++++||+++|+|+|+....+ ....+ +. +.+.... .-++++++++|.++++|
T Consensus 264 ~~~adi--~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~----~~~~i-~~-~~~~~~~----~~~~~~~a~~i~~l~~~ 331 (358)
T cd03812 264 LQAMDV--FLFPSLYEGLPLVLIEAQASGLPCILSDTIT----KEVDL-TD-LVKFLSL----DESPEIWAEEILKLKSE 331 (358)
T ss_pred HHhcCE--EEecccccCCCHHHHHHHHhCCCEEEEcCCc----hhhhh-cc-CccEEeC----CCCHHHHHHHHHHHHhC
Confidence 888887 5543 33578999999999999875544 33334 44 5554443 23579999999999998
Q ss_pred c
Q 012217 417 E 417 (468)
Q Consensus 417 ~ 417 (468)
+
T Consensus 332 ~ 332 (358)
T cd03812 332 D 332 (358)
T ss_pred c
Confidence 8
No 105
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.31 E-value=0.18 Score=52.30 Aligned_cols=92 Identities=10% Similarity=0.191 Sum_probs=61.9
Q ss_pred hcCceEecccChHHhhcCCCcceeeecc---C-hhhHHHHHhcCCcEEecCCCCCcccchhhheeec------eeEEEEe
Q 012217 326 KEKGFVASWCPQEEVLKHPSIGGFLTHC---G-WNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEW------GVGMEIN 395 (468)
Q Consensus 326 ~~~~~v~~~~p~~~il~~~~~~~~v~hg---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~------g~g~~~~ 395 (468)
.+|+.+.+...-..++..+++ +|.-. | -+++.||+++|+|+|+-. .......+ +.. ..|..+.
T Consensus 353 ~~~V~f~G~~~v~~~l~~aDv--~vlpS~~Eg~p~~vlEAma~G~PVVatd----~g~~~elv-~~~~~~~~g~~G~lv~ 425 (475)
T cd03813 353 EDNVKFTGFQNVKEYLPKLDV--LVLTSISEGQPLVILEAMAAGIPVVATD----VGSCRELI-EGADDEALGPAGEVVP 425 (475)
T ss_pred CCeEEEcCCccHHHHHHhCCE--EEeCchhhcCChHHHHHHHcCCCEEECC----CCChHHHh-cCCcccccCCceEEEC
Confidence 367777775555678888887 55432 2 368999999999999953 33333344 331 2576665
Q ss_pred CCCCCcchhHHHHHHHHHhcCch-HHHHHHHHHH
Q 012217 396 GDDEDVIRNEVEKLVREMMEGEK-GKQMRNKAME 428 (468)
Q Consensus 396 ~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~ 428 (468)
.-+.++++++|.++++|++ .+.+.+++++
T Consensus 426 ----~~d~~~la~ai~~ll~~~~~~~~~~~~a~~ 455 (475)
T cd03813 426 ----PADPEALARAILRLLKDPELRRAMGEAGRK 455 (475)
T ss_pred ----CCCHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 3579999999999998873 2345555543
No 106
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=96.20 E-value=0.095 Score=52.50 Aligned_cols=78 Identities=13% Similarity=0.057 Sum_probs=52.1
Q ss_pred cCceEecccChHH---hhcCCCcceee------eccCh-hhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeC
Q 012217 327 EKGFVASWCPQEE---VLKHPSIGGFL------THCGW-NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEING 396 (468)
Q Consensus 327 ~~~~v~~~~p~~~---il~~~~~~~~v------~hgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~ 396 (468)
+|+.+.++.|+.+ .+.++++..+- +.++. +.+.|++++|+|+|+.++ ...+ +..+ +..+..
T Consensus 254 ~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~-------~~~~-~~~~-~~~~~~ 324 (373)
T cd04950 254 PNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPL-------PEVR-RYED-EVVLIA 324 (373)
T ss_pred CCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCc-------HHHH-hhcC-cEEEeC
Confidence 7899999998765 67788883321 22332 458999999999998763 1122 3223 333331
Q ss_pred CCCCcchhHHHHHHHHHhcCc
Q 012217 397 DDEDVIRNEVEKLVREMMEGE 417 (468)
Q Consensus 397 ~~~~~~~~~l~~av~~~l~~~ 417 (468)
-+.+++.++|.+++.++
T Consensus 325 ----~d~~~~~~ai~~~l~~~ 341 (373)
T cd04950 325 ----DDPEEFVAAIEKALLED 341 (373)
T ss_pred ----CCHHHHHHHHHHHHhcC
Confidence 27999999999987544
No 107
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=96.15 E-value=0.22 Score=49.70 Aligned_cols=90 Identities=17% Similarity=0.237 Sum_probs=57.6
Q ss_pred cCceEeccc--ChH---HhhcCCCcceeeecc---C-hhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCC
Q 012217 327 EKGFVASWC--PQE---EVLKHPSIGGFLTHC---G-WNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGD 397 (468)
Q Consensus 327 ~~~~v~~~~--p~~---~il~~~~~~~~v~hg---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~ 397 (468)
+++.+..+. ++. .++..+++ ||.-+ | -.++.||+++|+|+|+....+ ....+ ..-..|+.+.
T Consensus 252 ~~v~~~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i-~~~~~g~~~~-- 322 (372)
T cd03792 252 PDIHVLTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQI-EDGETGFLVD-- 322 (372)
T ss_pred CCeEEEecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhc-ccCCceEEeC--
Confidence 567777765 432 46778887 77544 2 358999999999999975432 23334 4335566443
Q ss_pred CCCcchhHHHHHHHHHhcCch-HHHHHHHHHHH
Q 012217 398 DEDVIRNEVEKLVREMMEGEK-GKQMRNKAMEW 429 (468)
Q Consensus 398 ~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l 429 (468)
+.+.++.+|.+++.+++ .++|.+++++.
T Consensus 323 ----~~~~~a~~i~~ll~~~~~~~~~~~~a~~~ 351 (372)
T cd03792 323 ----TVEEAAVRILYLLRDPELRRKMGANAREH 351 (372)
T ss_pred ----CcHHHHHHHHHHHcCHHHHHHHHHHHHHH
Confidence 35677889999998762 23455555543
No 108
>PLN02501 digalactosyldiacylglycerol synthase
Probab=96.11 E-value=2.5 Score=45.27 Aligned_cols=75 Identities=12% Similarity=0.175 Sum_probs=51.4
Q ss_pred ceEecccChH-HhhcCCCcceeeecc---C-hhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcch
Q 012217 329 GFVASWCPQE-EVLKHPSIGGFLTHC---G-WNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIR 403 (468)
Q Consensus 329 ~~v~~~~p~~-~il~~~~~~~~v~hg---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~ 403 (468)
+.+.++.++. .++...++ ||.-+ | -++++||+++|+|+|+.-.-+.. .+ ...+.|. +. -+.
T Consensus 603 V~FLG~~dd~~~lyasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e-----~V-~~g~nGl-l~-----~D~ 668 (794)
T PLN02501 603 LNFLKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNE-----FF-RSFPNCL-TY-----KTS 668 (794)
T ss_pred EEecCCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCc-----eE-eecCCeE-ec-----CCH
Confidence 4455666654 48888888 76532 3 46889999999999998765422 12 3312333 22 268
Q ss_pred hHHHHHHHHHhcCc
Q 012217 404 NEVEKLVREMMEGE 417 (468)
Q Consensus 404 ~~l~~av~~~l~~~ 417 (468)
+++.++|.++|.++
T Consensus 669 EafAeAI~~LLsd~ 682 (794)
T PLN02501 669 EDFVAKVKEALANE 682 (794)
T ss_pred HHHHHHHHHHHhCc
Confidence 99999999999877
No 109
>PRK14098 glycogen synthase; Provisional
Probab=95.82 E-value=0.62 Score=48.51 Aligned_cols=135 Identities=12% Similarity=0.045 Sum_probs=75.7
Q ss_pred ceEEEeecCCcCC-CHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChH---HhhcCCC
Q 012217 270 SVIYVNFGSFIFM-NKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQE---EVLKHPS 345 (468)
Q Consensus 270 ~vv~vs~GS~~~~-~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~---~il~~~~ 345 (468)
.+++...|.+... ..+.+.+.+..+.+.+.++++ ++.+... ..+.+ ..+.++.++++.+..+++.. .+++.++
T Consensus 307 ~~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lvi-vG~G~~~-~~~~l-~~l~~~~~~~V~~~g~~~~~~~~~~~a~aD 383 (489)
T PRK14098 307 TPLVGVIINFDDFQGAELLAESLEKLVELDIQLVI-CGSGDKE-YEKRF-QDFAEEHPEQVSVQTEFTDAFFHLAIAGLD 383 (489)
T ss_pred CCEEEEeccccccCcHHHHHHHHHHHHhcCcEEEE-EeCCCHH-HHHHH-HHHHHHCCCCEEEEEecCHHHHHHHHHhCC
Confidence 4566666776533 234444444444444555443 4432100 00001 12223345678888877764 5888888
Q ss_pred cceeeecc---Ch-hhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHh
Q 012217 346 IGGFLTHC---GW-NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMM 414 (468)
Q Consensus 346 ~~~~v~hg---G~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l 414 (468)
+ ||.-. |. .+.+||+++|+|.|+....+-........ +.-+.|..+. .-++++++++|.+++
T Consensus 384 i--~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~-~~~~~G~l~~----~~d~~~la~ai~~~l 449 (489)
T PRK14098 384 M--LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVS-EDKGSGFIFH----DYTPEALVAKLGEAL 449 (489)
T ss_pred E--EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCC-CCCCceeEeC----CCCHHHHHHHHHHHH
Confidence 8 76533 22 37789999999988876643211110111 1236677775 357899999999876
No 110
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=95.80 E-value=0.54 Score=50.84 Aligned_cols=96 Identities=21% Similarity=0.293 Sum_probs=62.5
Q ss_pred hcCceEecccCh-HHhhcCCCcceeee---ccCh-hhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCC
Q 012217 326 KEKGFVASWCPQ-EEVLKHPSIGGFLT---HCGW-NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDED 400 (468)
Q Consensus 326 ~~~~~v~~~~p~-~~il~~~~~~~~v~---hgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~ 400 (468)
.+++.+.+|.++ ..++..+++ ||. +-|+ +++.||+++|+|+|+.... .....+ +.-..|+.+.. +.
T Consensus 573 ~~~V~flG~~~dv~~ll~aaDv--~VlpS~~Egfp~vlLEAMA~G~PVVat~~g----G~~EiV-~dg~~GlLv~~--~d 643 (694)
T PRK15179 573 GERILFTGLSRRVGYWLTQFNA--FLLLSRFEGLPNVLIEAQFSGVPVVTTLAG----GAGEAV-QEGVTGLTLPA--DT 643 (694)
T ss_pred CCcEEEcCCcchHHHHHHhcCE--EEeccccccchHHHHHHHHcCCeEEEECCC----ChHHHc-cCCCCEEEeCC--CC
Confidence 367888888776 357888888 654 4454 7899999999999998653 233344 44346777764 44
Q ss_pred cchhHHHHHHHHHhcCch-HHHHHHHHHHHH
Q 012217 401 VIRNEVEKLVREMMEGEK-GKQMRNKAMEWK 430 (468)
Q Consensus 401 ~~~~~l~~av~~~l~~~~-~~~~~~~a~~l~ 430 (468)
.+.+++++++.+++.+.. -..+++++++..
T Consensus 644 ~~~~~La~aL~~ll~~l~~~~~l~~~ar~~a 674 (694)
T PRK15179 644 VTAPDVAEALARIHDMCAADPGIARKAADWA 674 (694)
T ss_pred CChHHHHHHHHHHHhChhccHHHHHHHHHHH
Confidence 566677777777664321 115666655544
No 111
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=95.73 E-value=0.53 Score=48.77 Aligned_cols=130 Identities=8% Similarity=0.024 Sum_probs=74.7
Q ss_pred CceEEEeecCCcCC-CHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhH---HHHhhcCceEecccChH---Hhh
Q 012217 269 KSVIYVNFGSFIFM-NKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEF---EVKAKEKGFVASWCPQE---EVL 341 (468)
Q Consensus 269 ~~vv~vs~GS~~~~-~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~p~~---~il 341 (468)
+..+++..|.+... ..+.+.+.+..+.+.+.+++++ |.+. ..+.+.+ .++.+.++.+....+.. .++
T Consensus 290 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~-G~g~-----~~~~~~l~~~~~~~~~~v~~~~~~~~~~~~~~~ 363 (473)
T TIGR02095 290 DVPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVL-GTGD-----PELEEALRELAERYPGNVRVIIGYDEALAHLIY 363 (473)
T ss_pred CCCEEEEEecCccccChHHHHHHHHHHHHcCcEEEEE-CCCC-----HHHHHHHHHHHHHCCCcEEEEEcCCHHHHHHHH
Confidence 34667777877632 2344444444444445555544 3220 0011122 22334556555544543 477
Q ss_pred cCCCcceeeec---cCh-hhHHHHHhcCCcEEecCCCCCcccchhhheeec------eeEEEEeCCCCCcchhHHHHHHH
Q 012217 342 KHPSIGGFLTH---CGW-NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEW------GVGMEINGDDEDVIRNEVEKLVR 411 (468)
Q Consensus 342 ~~~~~~~~v~h---gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~------g~g~~~~~~~~~~~~~~l~~av~ 411 (468)
..+++ ||.- -|. .+.+||+++|+|.|+....+ ....+ ... +.|+.+. .-++++++++|.
T Consensus 364 ~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg----~~e~v-~~~~~~~~~~~G~l~~----~~d~~~la~~i~ 432 (473)
T TIGR02095 364 AGADF--ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGG----LADTV-VDGDPEAESGTGFLFE----EYDPGALLAALS 432 (473)
T ss_pred HhCCE--EEeCCCcCCcHHHHHHHHHCCCCeEEccCCC----ccceE-ecCCCCCCCCceEEeC----CCCHHHHHHHHH
Confidence 88887 6643 244 37889999999999876533 12122 222 6787775 357899999999
Q ss_pred HHhc
Q 012217 412 EMME 415 (468)
Q Consensus 412 ~~l~ 415 (468)
+++.
T Consensus 433 ~~l~ 436 (473)
T TIGR02095 433 RALR 436 (473)
T ss_pred HHHH
Confidence 9886
No 112
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=95.35 E-value=0.8 Score=47.37 Aligned_cols=134 Identities=11% Similarity=0.085 Sum_probs=73.8
Q ss_pred CceEEEeecCCcCC-CHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHH---HHhhcCceEecccChH---Hhh
Q 012217 269 KSVIYVNFGSFIFM-NKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFE---VKAKEKGFVASWCPQE---EVL 341 (468)
Q Consensus 269 ~~vv~vs~GS~~~~-~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~p~~---~il 341 (468)
+..+++..|.+... ..+.+.+.+..+.+.+.+|+++-.+. ..+.+.+. .+..+|+.+....++. .++
T Consensus 295 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 368 (476)
T cd03791 295 DAPLFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGD------PEYEEALRELAARYPGRVAVLIGYDEALAHLIY 368 (476)
T ss_pred CCCEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEEecCC------HHHHHHHHHHHHhCCCcEEEEEeCCHHHHHHHH
Confidence 34667777877632 23444454554544455554443221 00111221 2224566654433332 467
Q ss_pred cCCCcceeeecc---Ch-hhHHHHHhcCCcEEecCCCC--CcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhc
Q 012217 342 KHPSIGGFLTHC---GW-NSIVESLCSGVPMICWPFTG--DQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMME 415 (468)
Q Consensus 342 ~~~~~~~~v~hg---G~-~s~~eal~~GvP~v~~P~~~--DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~ 415 (468)
..+++ +|.-. |+ .+.+||+++|+|+|+....+ |--.+...- ..-|.|+.+. .-+.+++.++|.++++
T Consensus 369 ~~aDv--~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~-~~~~~G~~~~----~~~~~~l~~~i~~~l~ 441 (476)
T cd03791 369 AGADF--FLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNED-TGEGTGFVFE----GYNADALLAALRRALA 441 (476)
T ss_pred HhCCE--EECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCC-CCCCCeEEeC----CCCHHHHHHHHHHHHH
Confidence 77887 66431 22 47789999999999876643 222121111 1225788776 3468999999999885
No 113
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=95.30 E-value=0.45 Score=48.46 Aligned_cols=80 Identities=18% Similarity=0.141 Sum_probs=54.7
Q ss_pred hcCceEecccChHH---hhcCCCcceeeecc---Ch-hhHHHHHhcCCcEEecCCCCCcccchhhhee---eceeEEEEe
Q 012217 326 KEKGFVASWCPQEE---VLKHPSIGGFLTHC---GW-NSIVESLCSGVPMICWPFTGDQPTNGRYVCN---EWGVGMEIN 395 (468)
Q Consensus 326 ~~~~~v~~~~p~~~---il~~~~~~~~v~hg---G~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~---~~g~g~~~~ 395 (468)
.+++.+.+++|+.+ +|..+++ +|+-. |. .++.||+++|+|+|+.-..+. ...+++ .-..|....
T Consensus 304 ~~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp----~~~iv~~~~~g~~G~l~~ 377 (419)
T cd03806 304 EDKVEFVVNAPFEELLEELSTASI--GLHTMWNEHFGIGVVEYMAAGLIPLAHASGGP----LLDIVVPWDGGPTGFLAS 377 (419)
T ss_pred CCeEEEecCCCHHHHHHHHHhCeE--EEECCccCCcccHHHHHHHcCCcEEEEcCCCC----chheeeccCCCCceEEeC
Confidence 46788888988754 7888887 55421 22 488999999999998654331 112223 224665532
Q ss_pred CCCCCcchhHHHHHHHHHhcCc
Q 012217 396 GDDEDVIRNEVEKLVREMMEGE 417 (468)
Q Consensus 396 ~~~~~~~~~~l~~av~~~l~~~ 417 (468)
++++++++|.++++++
T Consensus 378 ------d~~~la~ai~~ll~~~ 393 (419)
T cd03806 378 ------TAEEYAEAIEKILSLS 393 (419)
T ss_pred ------CHHHHHHHHHHHHhCC
Confidence 7899999999999865
No 114
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=95.24 E-value=0.25 Score=49.35 Aligned_cols=129 Identities=15% Similarity=0.114 Sum_probs=78.1
Q ss_pred CceEEEeecCCc---CCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHh--hcCceEecccC---hHHh
Q 012217 269 KSVIYVNFGSFI---FMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKA--KEKGFVASWCP---QEEV 340 (468)
Q Consensus 269 ~~vv~vs~GS~~---~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~p---~~~i 340 (468)
++.|+|++=... ....+.+.+++++|.+.+..++++..... .+. ......+.+.. .+|+.+++-++ ...+
T Consensus 201 ~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~-p~~-~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~L 278 (365)
T TIGR03568 201 KPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNAD-AGS-RIINEAIEEYVNEHPNFRLFKSLGQERYLSL 278 (365)
T ss_pred CCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCC-CCc-hHHHHHHHHHhcCCCCEEEECCCChHHHHHH
Confidence 358888875532 33467899999999887766666543210 000 00111122211 25778776544 4568
Q ss_pred hcCCCcceeeeccChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHh
Q 012217 341 LKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMM 414 (468)
Q Consensus 341 l~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l 414 (468)
+.++++ +|+.++.+- .||.+.|+|+|.+- +-+ .-+ +. |..+.+- ..++++|.+++.+++
T Consensus 279 l~~a~~--vitdSSggi-~EA~~lg~Pvv~l~---~R~---e~~-~~-g~nvl~v----g~~~~~I~~a~~~~~ 337 (365)
T TIGR03568 279 LKNADA--VIGNSSSGI-IEAPSFGVPTINIG---TRQ---KGR-LR-ADSVIDV----DPDKEEIVKAIEKLL 337 (365)
T ss_pred HHhCCE--EEEcChhHH-HhhhhcCCCEEeec---CCc---hhh-hh-cCeEEEe----CCCHHHHHHHHHHHh
Confidence 889998 999886555 99999999999773 210 011 11 3222211 357899999999955
No 115
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=95.17 E-value=0.47 Score=48.27 Aligned_cols=180 Identities=9% Similarity=0.178 Sum_probs=99.1
Q ss_pred hhccccCCCCceEEEeecCCcCC------C----HHHHHHHHHHHHcCCCCEEEEEcCCCCC--CCCCC-CchhHHHHhh
Q 012217 260 LQWLDCKEPKSVIYVNFGSFIFM------N----KQQLIEVAMGLVNSNHPFLWIIRPDLVT--GETAD-LPAEFEVKAK 326 (468)
Q Consensus 260 ~~wld~~~~~~vv~vs~GS~~~~------~----~~~~~~~~~~l~~~~~~~lw~~~~~~~~--~~~~~-~~~~~~~~~~ 326 (468)
..|+...+.+++|.|+.-..... . .+.+.++++.|.+.|.++++..-....+ ...+. ....+.+.++
T Consensus 225 ~~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~ 304 (426)
T PRK10017 225 QHWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHVS 304 (426)
T ss_pred hhhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHHhcc
Confidence 34554333445788876543311 1 1334556666666688887665321100 00000 0112223333
Q ss_pred --cCceEe-c-ccChH--HhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEE-EeCCCC
Q 012217 327 --EKGFVA-S-WCPQE--EVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGME-INGDDE 399 (468)
Q Consensus 327 --~~~~v~-~-~~p~~--~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~-~~~~~~ 399 (468)
+++.++ + +-+.+ .++++++. +|.. =.=++.-|+..|||.+++++ |+-. ...+ +.+|..-. +.. +
T Consensus 305 ~~~~~~vi~~~~~~~e~~~iIs~~dl--~ig~-RlHa~I~a~~~gvP~i~i~Y--~~K~-~~~~-~~lg~~~~~~~~--~ 375 (426)
T PRK10017 305 DPARYHVVMDELNDLEMGKILGACEL--TVGT-RLHSAIISMNFGTPAIAINY--EHKS-AGIM-QQLGLPEMAIDI--R 375 (426)
T ss_pred cccceeEecCCCChHHHHHHHhhCCE--EEEe-cchHHHHHHHcCCCEEEeee--hHHH-HHHH-HHcCCccEEech--h
Confidence 233443 2 33443 68888886 7753 23467788999999999998 3322 2233 55566543 332 5
Q ss_pred CcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHh
Q 012217 400 DVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEILL 456 (468)
Q Consensus 400 ~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~~~~~~ 456 (468)
.++.++|.+.+.+++++.+ +++++.++-.+++++ .+.+...++++.+.+
T Consensus 376 ~l~~~~Li~~v~~~~~~r~--~~~~~l~~~v~~~r~------~~~~~~~~~~~~~~~ 424 (426)
T PRK10017 376 HLLDGSLQAMVADTLGQLP--ALNARLAEAVSRERQ------TGMQMVQSVLERIGE 424 (426)
T ss_pred hCCHHHHHHHHHHHHhCHH--HHHHHHHHHHHHHHH------HHHHHHHHHHHHhcc
Confidence 7888999999999998753 455554444444443 233555666665543
No 116
>PHA01630 putative group 1 glycosyl transferase
Probab=95.03 E-value=0.82 Score=44.98 Aligned_cols=75 Identities=11% Similarity=0.144 Sum_probs=46.5
Q ss_pred ccChHH---hhcCCCcceeee--c-cC-hhhHHHHHhcCCcEEecCCCC--Cc---ccchhhheee-----------cee
Q 012217 334 WCPQEE---VLKHPSIGGFLT--H-CG-WNSIVESLCSGVPMICWPFTG--DQ---PTNGRYVCNE-----------WGV 390 (468)
Q Consensus 334 ~~p~~~---il~~~~~~~~v~--h-gG-~~s~~eal~~GvP~v~~P~~~--DQ---~~na~~~~~~-----------~g~ 390 (468)
++|+.+ ++..+++ ||. + -| -.++.||+++|+|+|+.-..+ |. ..|+-.+ +. .++
T Consensus 197 ~v~~~~l~~~y~~aDv--~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv-~~~~~~~~~~~~~~~~ 273 (331)
T PHA01630 197 PLPDDDIYSLFAGCDI--LFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWI-KSGRKPKLWYTNPIHV 273 (331)
T ss_pred cCCHHHHHHHHHhCCE--EEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEe-eecccccccccCCccc
Confidence 366544 6888888 552 2 33 458999999999999976543 32 2233222 21 134
Q ss_pred EEEEeCCCCCcchhHHHHHHHHHhcC
Q 012217 391 GMEINGDDEDVIRNEVEKLVREMMEG 416 (468)
Q Consensus 391 g~~~~~~~~~~~~~~l~~av~~~l~~ 416 (468)
|..+. .+.+++.+++.++|.|
T Consensus 274 G~~v~-----~~~~~~~~~ii~~l~~ 294 (331)
T PHA01630 274 GYFLD-----PDIEDAYQKLLEALAN 294 (331)
T ss_pred ccccC-----CCHHHHHHHHHHHHhC
Confidence 55443 2567777888888876
No 117
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=95.02 E-value=0.71 Score=48.48 Aligned_cols=156 Identities=13% Similarity=0.135 Sum_probs=80.0
Q ss_pred CCCceEEEeecCCcCCCHHHHHHHHHHHH--c--CCCCEEEEEcCCCCCCCCCCCchhHHHHhhc-C---ceEecccChH
Q 012217 267 EPKSVIYVNFGSFIFMNKQQLIEVAMGLV--N--SNHPFLWIIRPDLVTGETADLPAEFEVKAKE-K---GFVASWCPQE 338 (468)
Q Consensus 267 ~~~~vv~vs~GS~~~~~~~~~~~~~~~l~--~--~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~-~---~~v~~~~p~~ 338 (468)
+++++|-+--||-.+-=...+-.++++.+ . ...+|+...... ...+.+.+...+ + +.++.--...
T Consensus 411 ~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~~l~fvvp~a~~-------~~~~~i~~~~~~~~~~~~~ii~~~~~~ 483 (608)
T PRK01021 411 SDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLASTHQLLVSSANP-------KYDHLILEVLQQEGCLHSHIVPSQFRY 483 (608)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhccCeEEEEecCch-------hhHHHHHHHHhhcCCCCeEEecCcchH
Confidence 35579999999976432333334444444 2 234555433221 011122222211 1 1233210125
Q ss_pred HhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCC-Ccccchhhhee----ecee-----EEEEeCC----CCCcchh
Q 012217 339 EVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTG-DQPTNGRYVCN----EWGV-----GMEINGD----DEDVIRN 404 (468)
Q Consensus 339 ~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~-DQ~~na~~~~~----~~g~-----g~~~~~~----~~~~~~~ 404 (468)
+++..+++ .+.=+| ..|.|+...|+|||++=-.. =-+.-++++++ ..++ |..+-.+ .+.++++
T Consensus 484 ~~m~aaD~--aLaaSG-TaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe 560 (608)
T PRK01021 484 ELMRECDC--ALAKCG-TIVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQPE 560 (608)
T ss_pred HHHHhcCe--eeecCC-HHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCHH
Confidence 78888887 666666 46789999999999862211 11234455432 1111 1111110 1368899
Q ss_pred HHHHHHHHHhcCch-HHHHHHHHHHHHHHH
Q 012217 405 EVEKLVREMMEGEK-GKQMRNKAMEWKGLA 433 (468)
Q Consensus 405 ~l~~av~~~l~~~~-~~~~~~~a~~l~~~~ 433 (468)
.|++++ ++|.|++ .+++++..+++.+.+
T Consensus 561 ~La~~l-~lL~d~~~r~~~~~~l~~lr~~L 589 (608)
T PRK01021 561 EVAAAL-DILKTSQSKEKQKDACRDLYQAM 589 (608)
T ss_pred HHHHHH-HHhcCHHHHHHHHHHHHHHHHHh
Confidence 999997 7777762 234445555444443
No 118
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=94.99 E-value=0.083 Score=54.35 Aligned_cols=121 Identities=22% Similarity=0.339 Sum_probs=79.0
Q ss_pred CCceEEEeecCCcCCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHH---H---hhcCceEecccChHH--
Q 012217 268 PKSVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEV---K---AKEKGFVASWCPQEE-- 339 (468)
Q Consensus 268 ~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~---~---~~~~~~v~~~~p~~~-- 339 (468)
+.-+||.+|--....+++.+...++-|.+.+..++|..+.+.. ++ ..|.. . -++++.+.+-+.-.+
T Consensus 757 ~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~-ge-----~rf~ty~~~~Gl~p~riifs~va~k~eHv 830 (966)
T KOG4626|consen 757 EDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAV-GE-----QRFRTYAEQLGLEPDRIIFSPVAAKEEHV 830 (966)
T ss_pred CCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEecccc-ch-----HHHHHHHHHhCCCccceeeccccchHHHH
Confidence 3458999998888889999999999999999999999997531 11 12211 1 134555544333222
Q ss_pred ---hhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEe
Q 012217 340 ---VLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEIN 395 (468)
Q Consensus 340 ---il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~ 395 (468)
.|......-+.+. |..|.++.+++|||||.+|.----...|.-+...+|+|..+.
T Consensus 831 rr~~LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~~Gl~hlia 888 (966)
T KOG4626|consen 831 RRGQLADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLLTALGLGHLIA 888 (966)
T ss_pred HhhhhhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHHHHcccHHHHh
Confidence 2222222225555 788999999999999999984433334433335678887655
No 119
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=94.88 E-value=0.39 Score=47.77 Aligned_cols=169 Identities=18% Similarity=0.130 Sum_probs=90.5
Q ss_pred cccCCCCceEEEeecCCcCCCHHHHHHHHHH---HHcC--CCCEEEEEcCCCCCCCCCCCchhHHH---HhhcCceEec-
Q 012217 263 LDCKEPKSVIYVNFGSFIFMNKQQLIEVAMG---LVNS--NHPFLWIIRPDLVTGETADLPAEFEV---KAKEKGFVAS- 333 (468)
Q Consensus 263 ld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~---l~~~--~~~~lw~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~- 333 (468)
++. ++++|-+--||-.+-=...+-.++++ +.+. +..|++...... ..+.+.+ ....++.+.-
T Consensus 180 l~~--~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~~-------~~~~i~~~~~~~~~~~~~~~~ 250 (373)
T PF02684_consen 180 LDP--DKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPEV-------HEELIEEILAEYPPDVSIVII 250 (373)
T ss_pred CCC--CCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCHH-------HHHHHHHHHHhhCCCCeEEEc
Confidence 454 45699999999753222222223333 3333 445554443220 1111111 1122333322
Q ss_pred ccChHHhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCC-Ccccchhhhee--eceeEEEEeCC-------CCCcch
Q 012217 334 WCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTG-DQPTNGRYVCN--EWGVGMEINGD-------DEDVIR 403 (468)
Q Consensus 334 ~~p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~-DQ~~na~~~~~--~~g~g~~~~~~-------~~~~~~ 403 (468)
.-.-.+++..+++ .+.=+| ..|.|+...|+|||++=-.. =-+..|+++++ ..|+---+... .+.+++
T Consensus 251 ~~~~~~~m~~ad~--al~~SG-TaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~ 327 (373)
T PF02684_consen 251 EGESYDAMAAADA--ALAASG-TATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATP 327 (373)
T ss_pred CCchHHHHHhCcc--hhhcCC-HHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCH
Confidence 2234567878887 555555 56889999999999873321 23445666643 21111001100 257999
Q ss_pred hHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCCCchHHH
Q 012217 404 NEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLN 446 (468)
Q Consensus 404 ~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~ 446 (468)
+.+.+++.++++|. ..++..+...+.+++..+.|.++..+
T Consensus 328 ~~i~~~~~~ll~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (373)
T PF02684_consen 328 ENIAAELLELLENP---EKRKKQKELFREIRQLLGPGASSRAA 367 (373)
T ss_pred HHHHHHHHHHhcCH---HHHHHHHHHHHHHHHhhhhccCCHHH
Confidence 99999999999988 44555555555555555455555443
No 120
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=94.85 E-value=0.016 Score=45.63 Aligned_cols=52 Identities=13% Similarity=0.160 Sum_probs=43.2
Q ss_pred hhhhhccccCCCCceEEEeecCCcCC---CH--HHHHHHHHHHHcCCCCEEEEEcCC
Q 012217 257 TECLQWLDCKEPKSVIYVNFGSFIFM---NK--QQLIEVAMGLVNSNHPFLWIIRPD 308 (468)
Q Consensus 257 ~~~~~wld~~~~~~vv~vs~GS~~~~---~~--~~~~~~~~~l~~~~~~~lw~~~~~ 308 (468)
..+..||...+.++-|+||+||.... .. ..+..++++++..+..+|..+...
T Consensus 28 ~~~P~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~ 84 (97)
T PF06722_consen 28 AVVPDWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAA 84 (97)
T ss_dssp EEEEGGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTC
T ss_pred CCCCcccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHH
Confidence 34668999988999999999998643 22 478999999999999999998754
No 121
>PRK00654 glgA glycogen synthase; Provisional
Probab=94.63 E-value=1.9 Score=44.51 Aligned_cols=134 Identities=13% Similarity=0.138 Sum_probs=73.0
Q ss_pred CceEEEeecCCcCC-CHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhH---HHHhhcCceE-ecccCh--HHhh
Q 012217 269 KSVIYVNFGSFIFM-NKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEF---EVKAKEKGFV-ASWCPQ--EEVL 341 (468)
Q Consensus 269 ~~vv~vs~GS~~~~-~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~---~~~~~~~~~v-~~~~p~--~~il 341 (468)
+.++++..|.+... ..+.+.+.+.-+.+.+.+++++ +.+. . .+.+.+ .++.+.++.+ ..|-.+ ..++
T Consensus 281 ~~~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lviv-G~g~----~-~~~~~l~~l~~~~~~~v~~~~g~~~~~~~~~~ 354 (466)
T PRK00654 281 DAPLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLL-GTGD----P-ELEEAFRALAARYPGKVGVQIGYDEALAHRIY 354 (466)
T ss_pred CCcEEEEeeccccccChHHHHHHHHHHHhcCCEEEEE-ecCc----H-HHHHHHHHHHHHCCCcEEEEEeCCHHHHHHHH
Confidence 34667777877532 2333333333333346666655 3220 0 011122 2233455543 355322 2478
Q ss_pred cCCCcceeeec---cCh-hhHHHHHhcCCcEEecCCCC--CcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhc
Q 012217 342 KHPSIGGFLTH---CGW-NSIVESLCSGVPMICWPFTG--DQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMME 415 (468)
Q Consensus 342 ~~~~~~~~v~h---gG~-~s~~eal~~GvP~v~~P~~~--DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~ 415 (468)
..+++ ||.- -|+ .+.+||+++|+|.|+.-..+ |.-.+...- ..-+.|+.+. .-++++++++|.+++.
T Consensus 355 ~~aDv--~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~-~~~~~G~lv~----~~d~~~la~~i~~~l~ 427 (466)
T PRK00654 355 AGADM--FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPE-DGEATGFVFD----DFNAEDLLRALRRALE 427 (466)
T ss_pred hhCCE--EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCC-CCCCceEEeC----CCCHHHHHHHHHHHHH
Confidence 88888 6643 244 48889999999999875532 221111111 1116687775 3578999999999885
No 122
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=94.58 E-value=8.8 Score=42.10 Aligned_cols=93 Identities=12% Similarity=0.171 Sum_probs=56.1
Q ss_pred cCceEeccc-Ch---HHhhcC-CC-cceeeec---cCh-hhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeC
Q 012217 327 EKGFVASWC-PQ---EEVLKH-PS-IGGFLTH---CGW-NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEING 396 (468)
Q Consensus 327 ~~~~v~~~~-p~---~~il~~-~~-~~~~v~h---gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~ 396 (468)
+++.+.++. +. ..++.+ ++ .++||.- =|. .++.||+++|+|+|+.-.. .....| +.-..|..++
T Consensus 619 g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~G----G~~EiV-~dg~tGfLVd- 692 (784)
T TIGR02470 619 GQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFG----GPLEII-QDGVSGFHID- 692 (784)
T ss_pred CeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCC----CHHHHh-cCCCcEEEeC-
Confidence 566666653 32 234443 21 1237743 233 5899999999999997443 344445 4435687776
Q ss_pred CCCCcchhHHHHHHHHHh----cCc-hHHHHHHHHHH
Q 012217 397 DDEDVIRNEVEKLVREMM----EGE-KGKQMRNKAME 428 (468)
Q Consensus 397 ~~~~~~~~~l~~av~~~l----~~~-~~~~~~~~a~~ 428 (468)
.-+.++++++|.+++ .|+ .++.+.+++++
T Consensus 693 ---p~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~ 726 (784)
T TIGR02470 693 ---PYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQ 726 (784)
T ss_pred ---CCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 347899999998876 455 23455555543
No 123
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=94.57 E-value=1.7 Score=45.46 Aligned_cols=74 Identities=18% Similarity=0.208 Sum_probs=49.2
Q ss_pred hcCceEecccCh-HHhhcCCCcceeeec---cC-hhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCC
Q 012217 326 KEKGFVASWCPQ-EEVLKHPSIGGFLTH---CG-WNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDED 400 (468)
Q Consensus 326 ~~~~~v~~~~p~-~~il~~~~~~~~v~h---gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~ 400 (468)
.+++.+.+|..+ ..+|..+++ ||.. -| -+++.||+++|+|+|+... ..+...+ ..-..|..+..
T Consensus 454 ~d~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATdv----GG~~EiV-~dG~nG~LVp~---- 522 (578)
T PRK15490 454 LERILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTPA----GGSAECF-IEGVSGFILDD---- 522 (578)
T ss_pred CCcEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeCC----CCcHHHc-ccCCcEEEECC----
Confidence 367888887654 357888888 7753 34 4699999999999998755 3344455 44366777763
Q ss_pred cchhHHHHHH
Q 012217 401 VIRNEVEKLV 410 (468)
Q Consensus 401 ~~~~~l~~av 410 (468)
-+.+.+++++
T Consensus 523 ~D~~aLa~ai 532 (578)
T PRK15490 523 AQTVNLDQAC 532 (578)
T ss_pred CChhhHHHHH
Confidence 2344455544
No 124
>PLN02275 transferase, transferring glycosyl groups
Probab=94.27 E-value=0.8 Score=45.78 Aligned_cols=75 Identities=16% Similarity=0.314 Sum_probs=51.7
Q ss_pred cCceEec-ccChHH---hhcCCCcceeee-c-----cC-hhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEe
Q 012217 327 EKGFVAS-WCPQEE---VLKHPSIGGFLT-H-----CG-WNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEIN 395 (468)
Q Consensus 327 ~~~~v~~-~~p~~~---il~~~~~~~~v~-h-----gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~ 395 (468)
+|+.+.. |+|+.+ +|..+++ ||. + -| -+++.||+++|+|+|+... ..+...+ +.-+.|+.+.
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~aDv--~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~----gg~~eiv-~~g~~G~lv~ 358 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGSADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSY----SCIGELV-KDGKNGLLFS 358 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHhCCE--EEEeccccccccccHHHHHHHHCCCCEEEecC----CChHHHc-cCCCCeEEEC
Confidence 3555544 788765 4888998 663 1 12 2579999999999999743 2344444 5546787764
Q ss_pred CCCCCcchhHHHHHHHHHh
Q 012217 396 GDDEDVIRNEVEKLVREMM 414 (468)
Q Consensus 396 ~~~~~~~~~~l~~av~~~l 414 (468)
+.++++++|.+++
T Consensus 359 ------~~~~la~~i~~l~ 371 (371)
T PLN02275 359 ------SSSELADQLLELL 371 (371)
T ss_pred ------CHHHHHHHHHHhC
Confidence 4789999998764
No 125
>PLN02846 digalactosyldiacylglycerol synthase
Probab=93.29 E-value=4.1 Score=41.89 Aligned_cols=73 Identities=11% Similarity=0.189 Sum_probs=51.4
Q ss_pred EecccChHHhhcCCCcceeeeccC----hhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHH
Q 012217 331 VASWCPQEEVLKHPSIGGFLTHCG----WNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEV 406 (468)
Q Consensus 331 v~~~~p~~~il~~~~~~~~v~hgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l 406 (468)
+..+.+...++...++ ||.-+- -++++||+++|+|+|+.-..+ | ..+ ..-+.|.... +.+++
T Consensus 288 f~G~~~~~~~~~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v-~~~~ng~~~~------~~~~~ 353 (462)
T PLN02846 288 YPGRDHADPLFHDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFF-KQFPNCRTYD------DGKGF 353 (462)
T ss_pred ECCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCcEEEecCCC----c-cee-ecCCceEecC------CHHHH
Confidence 3455666678888887 887643 478999999999999985432 2 333 3334454442 58899
Q ss_pred HHHHHHHhcCc
Q 012217 407 EKLVREMMEGE 417 (468)
Q Consensus 407 ~~av~~~l~~~ 417 (468)
.++|.++|.++
T Consensus 354 a~ai~~~l~~~ 364 (462)
T PLN02846 354 VRATLKALAEE 364 (462)
T ss_pred HHHHHHHHccC
Confidence 99999999754
No 126
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=93.16 E-value=0.96 Score=34.93 Aligned_cols=54 Identities=19% Similarity=0.226 Sum_probs=38.2
Q ss_pred ccChhhHHHHHhcCCcEEecCCCCCcccchhhheeece-eEEEEeCCCCCcchhHHHHHHHHHhcCc
Q 012217 352 HCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWG-VGMEINGDDEDVIRNEVEKLVREMMEGE 417 (468)
Q Consensus 352 hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g-~g~~~~~~~~~~~~~~l~~av~~~l~~~ 417 (468)
++-..-+.|++++|+|+|+-.. ......+ +. | -++..+ +.+++.++|..+++|+
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~-~~-~~~~~~~~------~~~el~~~i~~ll~~~ 63 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIF-ED-GEHIITYN------DPEELAEKIEYLLENP 63 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHc-CC-CCeEEEEC------CHHHHHHHHHHHHCCH
Confidence 3445688999999999999865 3333333 22 3 233332 8999999999999987
No 127
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=92.04 E-value=2.7 Score=43.97 Aligned_cols=93 Identities=12% Similarity=0.122 Sum_probs=67.3
Q ss_pred cCceEecccC--h-HHhhcCCCcceeeecc---ChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCC
Q 012217 327 EKGFVASWCP--Q-EEVLKHPSIGGFLTHC---GWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDED 400 (468)
Q Consensus 327 ~~~~v~~~~p--~-~~il~~~~~~~~v~hg---G~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~ 400 (468)
.++.+.++.. + ..++.+..+ +|.=+ |.++.+||+.+|+|+| .+.....| +...=|.-+.
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V-~d~~NG~li~----- 473 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYV-EHNKNGYIID----- 473 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceee-EcCCCcEEeC-----
Confidence 4566677776 3 357777776 77655 6779999999999999 33344444 5545576664
Q ss_pred cchhHHHHHHHHHhcCc-hHHHHHHHHHHHHHHHHH
Q 012217 401 VIRNEVEKLVREMMEGE-KGKQMRNKAMEWKGLAEE 435 (468)
Q Consensus 401 ~~~~~l~~av~~~l~~~-~~~~~~~~a~~l~~~~~~ 435 (468)
+..++.++|..+|.+. .+..+...|-+.+++...
T Consensus 474 -d~~~l~~al~~~L~~~~~wn~~~~~sy~~~~~yS~ 508 (519)
T TIGR03713 474 -DISELLKALDYYLDNLKNWNYSLAYSIKLIDDYSS 508 (519)
T ss_pred -CHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhH
Confidence 7899999999999987 456777777777766543
No 128
>PLN02939 transferase, transferring glycosyl groups
Probab=91.73 E-value=8.2 Score=43.04 Aligned_cols=83 Identities=8% Similarity=0.026 Sum_probs=54.7
Q ss_pred cCceEecccChH---HhhcCCCcceeeecc---C-hhhHHHHHhcCCcEEecCCCC--Ccccc--hhhheeeceeEEEEe
Q 012217 327 EKGFVASWCPQE---EVLKHPSIGGFLTHC---G-WNSIVESLCSGVPMICWPFTG--DQPTN--GRYVCNEWGVGMEIN 395 (468)
Q Consensus 327 ~~~~v~~~~p~~---~il~~~~~~~~v~hg---G-~~s~~eal~~GvP~v~~P~~~--DQ~~n--a~~~~~~~g~g~~~~ 395 (468)
+++.+..+.+.. .+++.+++ ||.-. | -.+.+||+++|+|.|+....+ |--.+ ...+.+.-+.|..+.
T Consensus 837 drV~FlG~~de~lah~IYAaADI--FLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~ 914 (977)
T PLN02939 837 NNIRLILKYDEALSHSIYAASDM--FIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFL 914 (977)
T ss_pred CeEEEEeccCHHHHHHHHHhCCE--EEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEec
Confidence 467777777764 48888888 77532 2 257899999999999876644 32211 111112235677665
Q ss_pred CCCCCcchhHHHHHHHHHhc
Q 012217 396 GDDEDVIRNEVEKLVREMME 415 (468)
Q Consensus 396 ~~~~~~~~~~l~~av~~~l~ 415 (468)
..+++.+.++|.+++.
T Consensus 915 ----~~D~eaLa~AL~rAL~ 930 (977)
T PLN02939 915 ----TPDEQGLNSALERAFN 930 (977)
T ss_pred ----CCCHHHHHHHHHHHHH
Confidence 3578899999988774
No 129
>PRK10125 putative glycosyl transferase; Provisional
Probab=91.50 E-value=5.5 Score=40.36 Aligned_cols=114 Identities=10% Similarity=0.016 Sum_probs=64.1
Q ss_pred EEEeecCCcCCCHHHHHHHHHHHHcCCCCE-EEEEcCCCCCCCCCCCchhHHHHhhcCceEeccc-Ch---HHhhcCCCc
Q 012217 272 IYVNFGSFIFMNKQQLIEVAMGLVNSNHPF-LWIIRPDLVTGETADLPAEFEVKAKEKGFVASWC-PQ---EEVLKHPSI 346 (468)
Q Consensus 272 v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~-lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-p~---~~il~~~~~ 346 (468)
+++..|.........+..+++++...+..+ ++.+|... +. ...++....+. ++ ..++..+++
T Consensus 243 ~il~v~~~~~~~~Kg~~~li~A~~~l~~~~~L~ivG~g~---------~~----~~~~v~~~g~~~~~~~l~~~y~~aDv 309 (405)
T PRK10125 243 KIAVVAHDLRYDGKTDQQLVREMMALGDKIELHTFGKFS---------PF----TAGNVVNHGFETDKRKLMSALNQMDA 309 (405)
T ss_pred EEEEEEeccccCCccHHHHHHHHHhCCCCeEEEEEcCCC---------cc----cccceEEecCcCCHHHHHHHHHhCCE
Confidence 334445432222234567888887765443 44455321 00 01344444443 22 345666777
Q ss_pred ceeeeccC----hhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHH
Q 012217 347 GGFLTHCG----WNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLV 410 (468)
Q Consensus 347 ~~~v~hgG----~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av 410 (468)
||.-.= -++++||+++|+|+|+....+ ... +++. +.|+-+.. -+.+++++++
T Consensus 310 --fV~pS~~Egfp~vilEAmA~G~PVVat~~gG----~~E-iv~~-~~G~lv~~----~d~~~La~~~ 365 (405)
T PRK10125 310 --LVFSSRVDNYPLILCEALSIGVPVIATHSDA----ARE-VLQK-SGGKTVSE----EEVLQLAQLS 365 (405)
T ss_pred --EEECCccccCcCHHHHHHHcCCCEEEeCCCC----hHH-hEeC-CcEEEECC----CCHHHHHhcc
Confidence 765432 368899999999999997764 222 3344 46877763 3677787654
No 130
>PLN02316 synthase/transferase
Probab=91.47 E-value=10 Score=42.88 Aligned_cols=114 Identities=7% Similarity=-0.006 Sum_probs=65.7
Q ss_pred cCceEecccChH---HhhcCCCcceeeecc---C-hhhHHHHHhcCCcEEecCCCC--Ccccc-------hhhheeecee
Q 012217 327 EKGFVASWCPQE---EVLKHPSIGGFLTHC---G-WNSIVESLCSGVPMICWPFTG--DQPTN-------GRYVCNEWGV 390 (468)
Q Consensus 327 ~~~~v~~~~p~~---~il~~~~~~~~v~hg---G-~~s~~eal~~GvP~v~~P~~~--DQ~~n-------a~~~~~~~g~ 390 (468)
+++.+....+.. .++..+++ ||.-. | -.+.+||+++|+|.|+.-..+ |.-.. +... ..-+.
T Consensus 900 ~rV~f~g~~de~lah~iyaaADi--flmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~-g~~~t 976 (1036)
T PLN02316 900 DRARLCLTYDEPLSHLIYAGADF--ILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQ-GLEPN 976 (1036)
T ss_pred CeEEEEecCCHHHHHHHHHhCcE--EEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhcccccccccccccc-ccCCc
Confidence 456555444443 57888887 77532 2 258899999999999875533 32211 1100 11246
Q ss_pred EEEEeCCCCCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHH
Q 012217 391 GMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVN 452 (468)
Q Consensus 391 g~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~~ 452 (468)
|+.+. ..+++.+..+|.+++.+ |.+....+++..++.+...-+-.....+.++
T Consensus 977 Gflf~----~~d~~aLa~AL~raL~~-----~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~ 1029 (1036)
T PLN02316 977 GFSFD----GADAAGVDYALNRAISA-----WYDGRDWFNSLCKRVMEQDWSWNRPALDYME 1029 (1036)
T ss_pred eEEeC----CCCHHHHHHHHHHHHhh-----hhhhHHHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 77775 46889999999999863 2333344454555444444444444444433
No 131
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=90.84 E-value=3.6 Score=40.69 Aligned_cols=135 Identities=17% Similarity=0.215 Sum_probs=84.9
Q ss_pred CceEEEeecCCcCCCHHHHHH----HHHHHHcC-CCCEEEEEcCCCCCCCCCCCchhH-HHHhh--cCceEe---cccCh
Q 012217 269 KSVIYVNFGSFIFMNKQQLIE----VAMGLVNS-NHPFLWIIRPDLVTGETADLPAEF-EVKAK--EKGFVA---SWCPQ 337 (468)
Q Consensus 269 ~~vv~vs~GS~~~~~~~~~~~----~~~~l~~~-~~~~lw~~~~~~~~~~~~~~~~~~-~~~~~--~~~~v~---~~~p~ 337 (468)
+..+.+|+=-..+.. +.+.. +.+.++.. +..++.-..... .. ..+ ..++. +|+.+. +|.+.
T Consensus 204 ~~~iLvT~HRreN~~-~~~~~i~~al~~i~~~~~~~~viyp~H~~~------~v-~e~~~~~L~~~~~v~li~pl~~~~f 275 (383)
T COG0381 204 KKYILVTAHRRENVG-EPLEEICEALREIAEEYPDVIVIYPVHPRP------RV-RELVLKRLKNVERVKLIDPLGYLDF 275 (383)
T ss_pred CcEEEEEcchhhccc-ccHHHHHHHHHHHHHhCCCceEEEeCCCCh------hh-hHHHHHHhCCCCcEEEeCCcchHHH
Confidence 348888865443333 23333 34444444 344444443220 01 111 12333 357765 46788
Q ss_pred HHhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCc
Q 012217 338 EEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGE 417 (468)
Q Consensus 338 ~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~ 417 (468)
..++.++-+ ++|-+| |-.-||-..|+|.+++=..-+++. ++ +. |.-+.+. .+.+.+.+++.++++++
T Consensus 276 ~~L~~~a~~--iltDSG-giqEEAp~lg~Pvl~lR~~TERPE---~v-~a-gt~~lvg-----~~~~~i~~~~~~ll~~~ 342 (383)
T COG0381 276 HNLMKNAFL--ILTDSG-GIQEEAPSLGKPVLVLRDTTERPE---GV-EA-GTNILVG-----TDEENILDAATELLEDE 342 (383)
T ss_pred HHHHHhceE--EEecCC-chhhhHHhcCCcEEeeccCCCCcc---ce-ec-CceEEeC-----ccHHHHHHHHHHHhhCh
Confidence 889999977 999887 456799999999999988888887 33 43 5544443 57899999999999887
Q ss_pred hHHHHHHHHH
Q 012217 418 KGKQMRNKAM 427 (468)
Q Consensus 418 ~~~~~~~~a~ 427 (468)
+..+|-+
T Consensus 343 ---~~~~~m~ 349 (383)
T COG0381 343 ---EFYERMS 349 (383)
T ss_pred ---HHHHHHh
Confidence 5554433
No 132
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=90.52 E-value=2.9 Score=40.62 Aligned_cols=58 Identities=17% Similarity=0.216 Sum_probs=39.8
Q ss_pred ChHHhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCCCcccch---hhheeeceeEEEEe
Q 012217 336 PQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNG---RYVCNEWGVGMEIN 395 (468)
Q Consensus 336 p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na---~~~~~~~g~g~~~~ 395 (468)
|+..+|..++. .|||=-=.+-+.||+..|+|+.++|.-.-..... ..+ ++.|.-..+.
T Consensus 221 Py~~~La~ad~-i~VT~DSvSMvsEA~~tG~pV~v~~l~~~~~r~~r~~~~L-~~~g~~r~~~ 281 (311)
T PF06258_consen 221 PYLGFLAAADA-IVVTEDSVSMVSEAAATGKPVYVLPLPGRSGRFRRFHQSL-EERGAVRPFT 281 (311)
T ss_pred cHHHHHHhCCE-EEEcCccHHHHHHHHHcCCCEEEecCCCcchHHHHHHHHH-HHCCCEEECC
Confidence 78889999987 4444444578899999999999999976212222 233 3446666655
No 133
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=88.93 E-value=3.1 Score=40.51 Aligned_cols=140 Identities=11% Similarity=0.070 Sum_probs=78.9
Q ss_pred ccccCCCCceEEEeecC-Cc--CCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEec--ccC
Q 012217 262 WLDCKEPKSVIYVNFGS-FI--FMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVAS--WCP 336 (468)
Q Consensus 262 wld~~~~~~vv~vs~GS-~~--~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~p 336 (468)
|+....+++.|.+..|+ .. .++.+.+.++++.|.+.+.++++..+.+. +....+.+.+..+ +..+.+ -++
T Consensus 172 ~~~~~~~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~----e~~~~~~i~~~~~-~~~l~g~~sL~ 246 (319)
T TIGR02193 172 FLGHALPAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDA----EKQRAERIAEALP-GAVVLPKMSLA 246 (319)
T ss_pred hhhccCCCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHH----HHHHHHHHHhhCC-CCeecCCCCHH
Confidence 44332234455555554 32 56788999999999776777776545321 0001112222222 223333 234
Q ss_pred h-HHhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEE-EEeC-CCCCcchhHHHHHHHHH
Q 012217 337 Q-EEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGM-EING-DDEDVIRNEVEKLVREM 413 (468)
Q Consensus 337 ~-~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~-~~~~-~~~~~~~~~l~~av~~~ 413 (468)
+ ..++.++++ ||+. -.|.++=|.+.|+|+|++ ++ +.+..+. .=+|-.. .+.. +.+.+++++|.++++++
T Consensus 247 el~ali~~a~l--~I~~-DSgp~HlAaa~g~P~i~l--fg--~t~p~~~-~P~~~~~~~~~~~~~~~I~~~~V~~ai~~~ 318 (319)
T TIGR02193 247 EVAALLAGADA--VVGV-DTGLTHLAAALDKPTVTL--YG--ATDPGRT-GGYGKPNVALLGESGANPTPDEVLAALEEL 318 (319)
T ss_pred HHHHHHHcCCE--EEeC-CChHHHHHHHcCCCEEEE--EC--CCCHhhc-ccCCCCceEEccCccCCCCHHHHHHHHHhh
Confidence 4 468889987 8887 567888899999999986 22 1111111 0111111 1111 13689999999999876
Q ss_pred h
Q 012217 414 M 414 (468)
Q Consensus 414 l 414 (468)
|
T Consensus 319 ~ 319 (319)
T TIGR02193 319 L 319 (319)
T ss_pred C
Confidence 5
No 134
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=87.44 E-value=3.6 Score=36.88 Aligned_cols=50 Identities=14% Similarity=0.197 Sum_probs=36.7
Q ss_pred hcCceEecccCh---HH-hhcCCCcceeeeccC----hhhHHHHHhcCCcEEecCCCCCc
Q 012217 326 KEKGFVASWCPQ---EE-VLKHPSIGGFLTHCG----WNSIVESLCSGVPMICWPFTGDQ 377 (468)
Q Consensus 326 ~~~~~v~~~~p~---~~-il~~~~~~~~v~hgG----~~s~~eal~~GvP~v~~P~~~DQ 377 (468)
..|+.+.+++++ .. ++..+++ +|+-.. .+++.||+++|+|+|+.+..+.+
T Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~di--~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~ 217 (229)
T cd01635 160 LDRVIFLGGLDPEELLALLLAAADV--FVLPSLREGFGLVVLEAMACGLPVIATDVGGPP 217 (229)
T ss_pred cccEEEeCCCCcHHHHHHHhhcCCE--EEecccccCcChHHHHHHhCCCCEEEcCCCCcc
Confidence 468888888632 22 4444777 777775 68999999999999998875543
No 135
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=87.03 E-value=4.2 Score=41.91 Aligned_cols=102 Identities=11% Similarity=0.120 Sum_probs=65.9
Q ss_pred ccChHH---hhcCCCcceeee---ccChh-hHHHHHhcCCc----EEecCCCCCcccchhhheeeceeEEEEeCCCCCcc
Q 012217 334 WCPQEE---VLKHPSIGGFLT---HCGWN-SIVESLCSGVP----MICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVI 402 (468)
Q Consensus 334 ~~p~~~---il~~~~~~~~v~---hgG~~-s~~eal~~GvP----~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~ 402 (468)
.+++.+ ++..+++ ||. +=|.| +..||+++|+| +|+--+.+- +..+ +-|+.++ ..+
T Consensus 343 ~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~----~~~l----~~gllVn----P~d 408 (456)
T TIGR02400 343 SYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGA----AQEL----NGALLVN----PYD 408 (456)
T ss_pred CCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCCC----hHHh----CCcEEEC----CCC
Confidence 455654 5777777 665 34654 77799999999 666654432 2222 2466665 357
Q ss_pred hhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHH
Q 012217 403 RNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEIL 455 (468)
Q Consensus 403 ~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~~~~~ 455 (468)
.++++++|.++|+.+.. +.+++.+++.+.+.+ -+...-.+++++.|.
T Consensus 409 ~~~lA~aI~~aL~~~~~-er~~r~~~~~~~v~~-----~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 409 IDGMADAIARALTMPLE-EREERHRAMMDKLRK-----NDVQRWREDFLSDLN 455 (456)
T ss_pred HHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHhh-----CCHHHHHHHHHHHhh
Confidence 99999999999975522 455566666666543 355666677776653
No 136
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=85.27 E-value=22 Score=36.44 Aligned_cols=123 Identities=9% Similarity=0.098 Sum_probs=77.5
Q ss_pred CCceEEEeecCCcCCCHHHHHHHHHHHHcCC-CCEEEEEcCCCCCCCCCCCchhHH--HHhhcCceEe-cccC-h-HHhh
Q 012217 268 PKSVIYVNFGSFIFMNKQQLIEVAMGLVNSN-HPFLWIIRPDLVTGETADLPAEFE--VKAKEKGFVA-SWCP-Q-EEVL 341 (468)
Q Consensus 268 ~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~-~~~lw~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~-~~~p-~-~~il 341 (468)
+..++++| +..+++.+....++.+ ..|=...+.. +.+.+. ++. +|+.+- .+.+ + ..++
T Consensus 282 ~~~~l~~t-------~s~~I~~i~~Lv~~lPd~~f~Iga~te--------~s~kL~~L~~y-~nvvly~~~~~~~l~~ly 345 (438)
T TIGR02919 282 RKQALILT-------NSDQIEHLEEIVQALPDYHFHIAALTE--------MSSKLMSLDKY-DNVKLYPNITTQKIQELY 345 (438)
T ss_pred cccEEEEC-------CHHHHHHHHHHHHhCCCcEEEEEecCc--------ccHHHHHHHhc-CCcEEECCcChHHHHHHH
Confidence 44577777 2555555555555543 4443333322 112222 233 566665 4677 3 5699
Q ss_pred cCCCcceeeeccC--hhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCc
Q 012217 342 KHPSIGGFLTHCG--WNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGE 417 (468)
Q Consensus 342 ~~~~~~~~v~hgG--~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~ 417 (468)
..+++-+-++|+. .+++.||+.+|+|+++.=.... +...+ .. |.-+. .-+.+++.++|.++|.++
T Consensus 346 ~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~---~~~~i-~~---g~l~~----~~~~~~m~~~i~~lL~d~ 412 (438)
T TIGR02919 346 QTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAH---NRDFI-AS---ENIFE----HNEVDQLISKLKDLLNDP 412 (438)
T ss_pred HhccEEEEccccccHHHHHHHHHHcCCcEEEEecccC---Ccccc-cC---Cceec----CCCHHHHHHHHHHHhcCH
Confidence 9999988889977 4799999999999998743222 22233 22 43343 346899999999999887
No 137
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=84.09 E-value=1.5 Score=43.89 Aligned_cols=38 Identities=13% Similarity=0.275 Sum_probs=32.7
Q ss_pred CcEEEEEcCCCC-ccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012217 10 KVHAVCIPSPFQ-SHIKAMLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 10 ~~~il~~p~p~~-GHi~P~l~La~~L~~rGh~Vt~~t~~ 47 (468)
.++|++++.... ||..+..+|+++|.++||+|.++...
T Consensus 4 ~~rili~t~~~G~GH~~~a~al~~~l~~~g~~~~~~~d~ 42 (380)
T PRK13609 4 NPKVLILTAHYGNGHVQVAKTLEQTFRQKGIKDVIVCDL 42 (380)
T ss_pred CCeEEEEEcCCCchHHHHHHHHHHHHHhcCCCcEEEEEh
Confidence 569999998755 99999999999999999997777553
No 138
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=83.80 E-value=4.5 Score=42.44 Aligned_cols=78 Identities=15% Similarity=0.152 Sum_probs=48.9
Q ss_pred ChHHhhcCCCcceeee---ccChh-hHHHHHhcCCcEEecCCCC-Ccccchhhheee-ceeEEEEeCCC---CCcchhHH
Q 012217 336 PQEEVLKHPSIGGFLT---HCGWN-SIVESLCSGVPMICWPFTG-DQPTNGRYVCNE-WGVGMEINGDD---EDVIRNEV 406 (468)
Q Consensus 336 p~~~il~~~~~~~~v~---hgG~~-s~~eal~~GvP~v~~P~~~-DQ~~na~~~~~~-~g~g~~~~~~~---~~~~~~~l 406 (468)
+..+++.-+++ ||. +=||| ++.||+++|+|+|+....+ ..+.. .++.. -..|+.+..++ -.-+.+++
T Consensus 467 ~y~E~~~g~dl--~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~--E~v~~~~~~gi~V~~r~~~~~~e~v~~L 542 (590)
T cd03793 467 DYEEFVRGCHL--GVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME--EHIEDPESYGIYIVDRRFKSPDESVQQL 542 (590)
T ss_pred chHHHhhhceE--EEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH--HHhccCCCceEEEecCCccchHHHHHHH
Confidence 46777888888 554 45654 8899999999999987733 22222 12121 12466664211 12456888
Q ss_pred HHHHHHHhcCc
Q 012217 407 EKLVREMMEGE 417 (468)
Q Consensus 407 ~~av~~~l~~~ 417 (468)
++++.+++..+
T Consensus 543 a~~m~~~~~~~ 553 (590)
T cd03793 543 TQYMYEFCQLS 553 (590)
T ss_pred HHHHHHHhCCc
Confidence 88888888544
No 139
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=83.10 E-value=22 Score=35.18 Aligned_cols=172 Identities=12% Similarity=0.097 Sum_probs=92.8
Q ss_pred CCceEEEeecCCcCCC---HHHHHHHHHHHHc--CCCCEEEEEcCCCCCCCCCCCchhHH-HHhhcCce-Eeccc-C-h-
Q 012217 268 PKSVIYVNFGSFIFMN---KQQLIEVAMGLVN--SNHPFLWIIRPDLVTGETADLPAEFE-VKAKEKGF-VASWC-P-Q- 337 (468)
Q Consensus 268 ~~~vv~vs~GS~~~~~---~~~~~~~~~~l~~--~~~~~lw~~~~~~~~~~~~~~~~~~~-~~~~~~~~-v~~~~-p-~- 337 (468)
++.++.+--||-.+-- ...+.+.++.|.+ .+.+|+.-+-... . .... +....+.. ..-++ + +
T Consensus 187 ~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~ 258 (381)
T COG0763 187 DEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNAK-------Y-RRIIEEALKWEVAGLSLILIDGEK 258 (381)
T ss_pred CCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcHH-------H-HHHHHHHhhccccCceEEecCchH
Confidence 4569999999975321 2234444455542 3466665543220 0 1111 11112221 11121 2 1
Q ss_pred HHhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCC-CcccchhhheeeceeEE-------EEeCC--CCCcchhHHH
Q 012217 338 EEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTG-DQPTNGRYVCNEWGVGM-------EINGD--DEDVIRNEVE 407 (468)
Q Consensus 338 ~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~-DQ~~na~~~~~~~g~g~-------~~~~~--~~~~~~~~l~ 407 (468)
..++..+++ .+.-+| .-+.|+..+|+|||+.=-.. =-+..|++.+.-+=+++ .+-.. .+.++++.|+
T Consensus 259 ~~a~~~aD~--al~aSG-T~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la 335 (381)
T COG0763 259 RKAFAAADA--ALAASG-TATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLA 335 (381)
T ss_pred HHHHHHhhH--HHHhcc-HHHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHH
Confidence 236666776 555555 45789999999999862111 01223444433222221 11000 1478999999
Q ss_pred HHHHHHhcCc-hHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHH
Q 012217 408 KLVREMMEGE-KGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEI 454 (468)
Q Consensus 408 ~av~~~l~~~-~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~~~~ 454 (468)
+++.+++.|+ +.+.+++...++.+.++ ++++++.+.+.+++.+
T Consensus 336 ~~l~~ll~~~~~~~~~~~~~~~l~~~l~----~~~~~e~aA~~vl~~~ 379 (381)
T COG0763 336 RALEELLLNGDRREALKEKFRELHQYLR----EDPASEIAAQAVLELL 379 (381)
T ss_pred HHHHHHhcChHhHHHHHHHHHHHHHHHc----CCcHHHHHHHHHHHHh
Confidence 9999999887 34567777777777666 3556666666665554
No 140
>PRK14099 glycogen synthase; Provisional
Probab=83.08 E-value=62 Score=33.63 Aligned_cols=86 Identities=10% Similarity=0.116 Sum_probs=47.3
Q ss_pred hcCc-eEecccChHH-hh-cCCCcceeee---ccCh-hhHHHHHhcCCcEEecCCCC--Ccccchhhhee--eceeEEEE
Q 012217 326 KEKG-FVASWCPQEE-VL-KHPSIGGFLT---HCGW-NSIVESLCSGVPMICWPFTG--DQPTNGRYVCN--EWGVGMEI 394 (468)
Q Consensus 326 ~~~~-~v~~~~p~~~-il-~~~~~~~~v~---hgG~-~s~~eal~~GvP~v~~P~~~--DQ~~na~~~~~--~~g~g~~~ 394 (468)
++++ .+.+|-.... ++ ..+++ ||. +=|. .+.+||+++|+|.|+.-..+ |--.......+ .-+.|+.+
T Consensus 349 ~~~v~~~~G~~~~l~~~~~a~aDi--fv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~ 426 (485)
T PRK14099 349 PGQIGVVIGYDEALAHLIQAGADA--LLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQF 426 (485)
T ss_pred CCCEEEEeCCCHHHHHHHHhcCCE--EEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEe
Confidence 3444 3456633322 33 34666 764 3343 47789999997777664422 32111111101 01467777
Q ss_pred eCCCCCcchhHHHHHHHH---HhcCc
Q 012217 395 NGDDEDVIRNEVEKLVRE---MMEGE 417 (468)
Q Consensus 395 ~~~~~~~~~~~l~~av~~---~l~~~ 417 (468)
. .-+.++++++|.+ +++|+
T Consensus 427 ~----~~d~~~La~ai~~a~~l~~d~ 448 (485)
T PRK14099 427 S----PVTADALAAALRKTAALFADP 448 (485)
T ss_pred C----CCCHHHHHHHHHHHHHHhcCH
Confidence 5 3578999999987 55555
No 141
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=81.07 E-value=2.3 Score=40.38 Aligned_cols=91 Identities=15% Similarity=0.154 Sum_probs=57.1
Q ss_pred cCceE-ecccChHHhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCCCccc--chhhheeeceeEEEEeCCCCCcch
Q 012217 327 EKGFV-ASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPT--NGRYVCNEWGVGMEINGDDEDVIR 403 (468)
Q Consensus 327 ~~~~v-~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~--na~~~~~~~g~g~~~~~~~~~~~~ 403 (468)
+|..+ ..|-...++|.+.++ .|--.| ..+-+++--|||+|.+|-.+-|+. .|.+=..-+|+.+.+-. -.+
T Consensus 294 dnc~l~lsqqsfadiLH~ada--algmAG-TAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~----~~a 366 (412)
T COG4370 294 DNCSLWLSQQSFADILHAADA--ALGMAG-TATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVR----PEA 366 (412)
T ss_pred CceEEEEeHHHHHHHHHHHHH--HHHhcc-chHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecC----Cch
Confidence 45544 356666677777766 444333 234457889999999999999976 45443234577766652 233
Q ss_pred hHHHHHHHHHhcCchHHHHHHHHH
Q 012217 404 NEVEKLVREMMEGEKGKQMRNKAM 427 (468)
Q Consensus 404 ~~l~~av~~~l~~~~~~~~~~~a~ 427 (468)
..-..++++++.|+ .+..+++
T Consensus 367 q~a~~~~q~ll~dp---~r~~air 387 (412)
T COG4370 367 QAAAQAVQELLGDP---QRLTAIR 387 (412)
T ss_pred hhHHHHHHHHhcCh---HHHHHHH
Confidence 34444455599998 5666555
No 142
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=79.14 E-value=8.6 Score=39.71 Aligned_cols=103 Identities=15% Similarity=0.195 Sum_probs=59.8
Q ss_pred ecccChHH---hhcCCCcceeee---ccChh-hHHHHHhcCCc----EEecCCCCCcccchhhheeeceeEEEEeCCCCC
Q 012217 332 ASWCPQEE---VLKHPSIGGFLT---HCGWN-SIVESLCSGVP----MICWPFTGDQPTNGRYVCNEWGVGMEINGDDED 400 (468)
Q Consensus 332 ~~~~p~~~---il~~~~~~~~v~---hgG~~-s~~eal~~GvP----~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~ 400 (468)
.+++++.+ ++..+++ ||. +-|+| ++.||+++|+| +|+--..+- + +...-|+.++ .
T Consensus 346 ~g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~----~----~~~~~g~lv~----p 411 (460)
T cd03788 346 YRSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGA----A----EELSGALLVN----P 411 (460)
T ss_pred eCCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEeccccc----h----hhcCCCEEEC----C
Confidence 35667654 5778887 663 44654 67899999999 554422221 1 1112355554 3
Q ss_pred cchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHH
Q 012217 401 VIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEI 454 (468)
Q Consensus 401 ~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~~~~ 454 (468)
-+.++++++|.++++++.. +.+.+.++..+.+.+ -+...-.+++++.|
T Consensus 412 ~d~~~la~ai~~~l~~~~~-e~~~~~~~~~~~v~~-----~~~~~w~~~~l~~l 459 (460)
T cd03788 412 YDIDEVADAIHRALTMPLE-ERRERHRKLREYVRT-----HDVQAWANSFLDDL 459 (460)
T ss_pred CCHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHh-----CCHHHHHHHHHHhh
Confidence 5789999999999986521 233333333333332 35555556666554
No 143
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=78.62 E-value=4.8 Score=33.43 Aligned_cols=51 Identities=14% Similarity=0.292 Sum_probs=35.2
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCC
Q 012217 12 HAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIP 74 (468)
Q Consensus 12 ~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l~ 74 (468)
+|+++.-....| ...+++.|.++||+|++++........... .++.+..++
T Consensus 1 KIl~i~~~~~~~---~~~~~~~L~~~g~~V~ii~~~~~~~~~~~~---------~~i~~~~~~ 51 (139)
T PF13477_consen 1 KILLIGNTPSTF---IYNLAKELKKRGYDVHIITPRNDYEKYEII---------EGIKVIRLP 51 (139)
T ss_pred CEEEEecCcHHH---HHHHHHHHHHCCCEEEEEEcCCCchhhhHh---------CCeEEEEec
Confidence 356666655555 567899999999999999985443222211 378888774
No 144
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=78.53 E-value=6.4 Score=39.19 Aligned_cols=111 Identities=14% Similarity=0.086 Sum_probs=64.5
Q ss_pred cCceEec-ccChHHhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCCCcccchhhhe---eeceeEEEEeCCCCCcc
Q 012217 327 EKGFVAS-WCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVC---NEWGVGMEINGDDEDVI 402 (468)
Q Consensus 327 ~~~~v~~-~~p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~---~~~g~g~~~~~~~~~~~ 402 (468)
+++..++ ..+-.++|..+++ +||-- .+.+.|.+..++|+|....-.|.+...+-+. +...-|..+ -+
T Consensus 252 ~~i~~~~~~~~~~~ll~~aDi--LITDy-SSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~~~~~pg~~~------~~ 322 (369)
T PF04464_consen 252 SNIIFVSDNEDIYDLLAAADI--LITDY-SSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDYEEDLPGPIV------YN 322 (369)
T ss_dssp TTEEE-TT-S-HHHHHHT-SE--EEESS--THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-TTTSSSS-EE------SS
T ss_pred CcEEECCCCCCHHHHHHhcCE--EEEec-hhHHHHHHHhCCCEEEEeccHHHHhhccCCCCchHhhCCCcee------CC
Confidence 4555554 5567889999998 99987 4578899999999998877666664443221 112233333 36
Q ss_pred hhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCCCchHHHHHH
Q 012217 403 RNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDK 449 (468)
Q Consensus 403 ~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~ 449 (468)
.++|.++|..++.+++ .++++.++..+++-. ..+|.++++-++.
T Consensus 323 ~~eL~~~i~~~~~~~~--~~~~~~~~~~~~~~~-~~Dg~s~eri~~~ 366 (369)
T PF04464_consen 323 FEELIEAIENIIENPD--EYKEKREKFRDKFFK-YNDGNSSERIVNY 366 (369)
T ss_dssp HHHHHHHHTTHHHHHH--HTHHHHHHHHHHHST-T--S-HHHHHHHH
T ss_pred HHHHHHHHHhhhhCCH--HHHHHHHHHHHHhCC-CCCchHHHHHHHH
Confidence 8999999999886542 455666666666644 3344444444433
No 145
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=77.23 E-value=7.9 Score=32.64 Aligned_cols=46 Identities=15% Similarity=0.132 Sum_probs=39.1
Q ss_pred CCcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHH
Q 012217 9 SKVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLL 54 (468)
Q Consensus 9 ~~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~ 54 (468)
++++|++.+.++-+|-.-..-++..|.++|++|+.+-.....+.+.
T Consensus 2 ~~~~vl~~~~~gD~H~lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~ 47 (137)
T PRK02261 2 KKKTVVLGVIGADCHAVGNKILDRALTEAGFEVINLGVMTSQEEFI 47 (137)
T ss_pred CCCEEEEEeCCCChhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHH
Confidence 3789999999999999999999999999999999997654444333
No 146
>PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN []. This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A ....
Probab=75.33 E-value=5.1 Score=33.30 Aligned_cols=45 Identities=13% Similarity=0.072 Sum_probs=36.3
Q ss_pred cEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhh
Q 012217 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKA 56 (468)
Q Consensus 11 ~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~ 56 (468)
+||++.-.++.+=+. ...+.++|.++|++|+++.++...+.+...
T Consensus 1 k~i~l~vtGs~~~~~-~~~~l~~L~~~g~~v~vv~S~~A~~~~~~~ 45 (129)
T PF02441_consen 1 KRILLGVTGSIAAYK-APDLLRRLKRAGWEVRVVLSPSAERFVTPE 45 (129)
T ss_dssp -EEEEEE-SSGGGGG-HHHHHHHHHTTTSEEEEEESHHHHHHSHHH
T ss_pred CEEEEEEECHHHHHH-HHHHHHHHhhCCCEEEEEECCcHHHHhhhh
Confidence 378888888877777 999999999999999999998776655554
No 147
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=74.26 E-value=77 Score=29.70 Aligned_cols=133 Identities=17% Similarity=0.235 Sum_probs=71.8
Q ss_pred eEEEeecCCcC-CCHHHHHHHHHHHHcCCC-CEEEEEcCCCCCCCCCCCchhHHHHh--hcCceEecccC---hHHhhcC
Q 012217 271 VIYVNFGSFIF-MNKQQLIEVAMGLVNSNH-PFLWIIRPDLVTGETADLPAEFEVKA--KEKGFVASWCP---QEEVLKH 343 (468)
Q Consensus 271 vv~vs~GS~~~-~~~~~~~~~~~~l~~~~~-~~lw~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~p---~~~il~~ 343 (468)
.+++..|.... ...+.+.+.+..+..... --++.++..... ...+.. ..... ..++....+++ ...++..
T Consensus 200 ~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~-~~~~~~~~~~v~~~g~~~~~~~~~~~~~ 276 (381)
T COG0438 200 FVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPER--REELEK-LAKKLGLEDNVKFLGYVPDEELAELLAS 276 (381)
T ss_pred eEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCcc--HHHHHH-HHHHhCCCCcEEEecccCHHHHHHHHHh
Confidence 56677777544 334445555555544432 123333332100 000111 22221 25666777888 2346766
Q ss_pred CCcceeeec---cChh-hHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCc
Q 012217 344 PSIGGFLTH---CGWN-SIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGE 417 (468)
Q Consensus 344 ~~~~~~v~h---gG~~-s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~ 417 (468)
+++ ++.- .|.| ++.||+++|+|+|.... ......+ ...+.|. +.. ..+.+++.+++..++++.
T Consensus 277 ~~~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~----~~~~e~~-~~~~~g~-~~~---~~~~~~~~~~i~~~~~~~ 343 (381)
T COG0438 277 ADV--FVLPSLSEGFGLVLLEAMAAGTPVIASDV----GGIPEVV-EDGETGL-LVP---PGDVEELADALEQLLEDP 343 (381)
T ss_pred CCE--EEeccccccchHHHHHHHhcCCcEEECCC----CChHHHh-cCCCceE-ecC---CCCHHHHHHHHHHHhcCH
Confidence 766 5555 3554 35999999999977644 3222233 3322466 432 227899999999998776
No 148
>PLN00142 sucrose synthase
Probab=74.13 E-value=11 Score=41.48 Aligned_cols=71 Identities=13% Similarity=0.253 Sum_probs=45.6
Q ss_pred eeec---cCh-hhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHh----cCch-H
Q 012217 349 FLTH---CGW-NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMM----EGEK-G 419 (468)
Q Consensus 349 ~v~h---gG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l----~~~~-~ 419 (468)
||.- =|+ .++.||+++|+|+|+.... -....| +.-..|..++. -+.++++++|.+++ .|++ +
T Consensus 670 fVlPS~~EgFGLvvLEAMA~GlPVVATdvG----G~~EIV-~dG~tG~LV~P----~D~eaLA~aI~~lLekLl~Dp~lr 740 (815)
T PLN00142 670 FVQPALYEAFGLTVVEAMTCGLPTFATCQG----GPAEII-VDGVSGFHIDP----YHGDEAANKIADFFEKCKEDPSYW 740 (815)
T ss_pred EEeCCcccCCCHHHHHHHHcCCCEEEcCCC----CHHHHh-cCCCcEEEeCC----CCHHHHHHHHHHHHHHhcCCHHHH
Confidence 6653 344 4899999999999997543 344444 44346877763 46788888887654 5652 3
Q ss_pred HHHHHHHHH
Q 012217 420 KQMRNKAME 428 (468)
Q Consensus 420 ~~~~~~a~~ 428 (468)
.+|.+++++
T Consensus 741 ~~mg~~Ar~ 749 (815)
T PLN00142 741 NKISDAGLQ 749 (815)
T ss_pred HHHHHHHHH
Confidence 455555544
No 149
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=73.47 E-value=21 Score=33.83 Aligned_cols=94 Identities=14% Similarity=0.173 Sum_probs=58.0
Q ss_pred ceEEEeecCC---cCCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHh-hcCce-Eecc--cCh-HHhh
Q 012217 270 SVIYVNFGSF---IFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKA-KEKGF-VASW--CPQ-EEVL 341 (468)
Q Consensus 270 ~vv~vs~GS~---~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~-~~~~~-v~~~--~p~-~~il 341 (468)
+.|.+..||. ..++.+.+.++++.|.+.+.++++..+++ + ...-+.+.+.. ..++. +.+- +.+ ..++
T Consensus 122 ~~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~----e-~~~~~~i~~~~~~~~~~~~~~~~~l~e~~~li 196 (279)
T cd03789 122 PVVVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPA----E-RELAEEIAAALGGPRVVNLAGKTSLRELAALL 196 (279)
T ss_pred CEEEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechh----h-HHHHHHHHHhcCCCccccCcCCCCHHHHHHHH
Confidence 4677777765 35678899999999987788877654432 0 00111222222 11222 2222 222 5688
Q ss_pred cCCCcceeeeccChhhHHHHHhcCCcEEec
Q 012217 342 KHPSIGGFLTHCGWNSIVESLCSGVPMICW 371 (468)
Q Consensus 342 ~~~~~~~~v~hgG~~s~~eal~~GvP~v~~ 371 (468)
.++++ ||+.-. |.++-|.+.|+|+|++
T Consensus 197 ~~~~l--~I~~Ds-g~~HlA~a~~~p~i~l 223 (279)
T cd03789 197 ARADL--VVTNDS-GPMHLAAALGTPTVAL 223 (279)
T ss_pred HhCCE--EEeeCC-HHHHHHHHcCCCEEEE
Confidence 88888 999854 6777778999999887
No 150
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=72.77 E-value=8 Score=31.44 Aligned_cols=36 Identities=17% Similarity=0.160 Sum_probs=32.4
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012217 12 HAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 12 ~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~ 47 (468)
+|++.+.++-.|.....-++..|.++|++|...-..
T Consensus 1 ~vl~~~~~~e~H~lG~~~~~~~l~~~G~~V~~lg~~ 36 (119)
T cd02067 1 KVVIATVGGDGHDIGKNIVARALRDAGFEVIDLGVD 36 (119)
T ss_pred CEEEEeeCCchhhHHHHHHHHHHHHCCCEEEECCCC
Confidence 488999999999999999999999999999877543
No 151
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=72.22 E-value=3.7 Score=34.50 Aligned_cols=25 Identities=24% Similarity=0.361 Sum_probs=18.5
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCcch
Q 012217 26 AMLKLAKLLHHKGFHITFVNTEFNH 50 (468)
Q Consensus 26 P~l~La~~L~~rGh~Vt~~t~~~~~ 50 (468)
=+..|++.|.++||+|+++++....
T Consensus 6 ~~~~l~~~L~~~G~~V~v~~~~~~~ 30 (160)
T PF13579_consen 6 YVRELARALAARGHEVTVVTPQPDP 30 (160)
T ss_dssp HHHHHHHHHHHTT-EEEEEEE---G
T ss_pred HHHHHHHHHHHCCCEEEEEecCCCC
Confidence 3678999999999999999975443
No 152
>PRK10307 putative glycosyl transferase; Provisional
Probab=69.01 E-value=7.5 Score=39.25 Aligned_cols=38 Identities=13% Similarity=0.123 Sum_probs=26.9
Q ss_pred cEEEEEcC---CCCc-cHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 11 VHAVCIPS---PFQS-HIKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 11 ~~il~~p~---p~~G-Hi~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
|+|++++. |-.| =-.-...|++.|.++||+|+++|++.
T Consensus 1 mkIlii~~~~~P~~~g~~~~~~~l~~~L~~~G~~V~vit~~~ 42 (412)
T PRK10307 1 MKILVYGINYAPELTGIGKYTGEMAEWLAARGHEVRVITAPP 42 (412)
T ss_pred CeEEEEecCCCCCccchhhhHHHHHHHHHHCCCeEEEEecCC
Confidence 47777773 3222 11125799999999999999999763
No 153
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=68.37 E-value=5.7 Score=33.98 Aligned_cols=31 Identities=23% Similarity=0.396 Sum_probs=24.5
Q ss_pred CCCccHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012217 19 PFQSHIKAMLKLAKLLHHKGFHITFVNTEFN 49 (468)
Q Consensus 19 p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~ 49 (468)
...|=-.-...|+++|+++||+|+++++...
T Consensus 10 ~~GG~e~~~~~l~~~l~~~G~~v~v~~~~~~ 40 (177)
T PF13439_consen 10 NIGGAERVVLNLARALAKRGHEVTVVSPGVK 40 (177)
T ss_dssp SSSHHHHHHHHHHHHHHHTT-EEEEEESS-T
T ss_pred CCChHHHHHHHHHHHHHHCCCEEEEEEcCCC
Confidence 4566677889999999999999999987543
No 154
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=68.10 E-value=21 Score=39.67 Aligned_cols=100 Identities=13% Similarity=0.098 Sum_probs=62.1
Q ss_pred HhhcCCCcceeeec---cChh-hHHHHHhcCCc---EEecCCCCCcccchhhheeece-eEEEEeCCCCCcchhHHHHHH
Q 012217 339 EVLKHPSIGGFLTH---CGWN-SIVESLCSGVP---MICWPFTGDQPTNGRYVCNEWG-VGMEINGDDEDVIRNEVEKLV 410 (468)
Q Consensus 339 ~il~~~~~~~~v~h---gG~~-s~~eal~~GvP---~v~~P~~~DQ~~na~~~~~~~g-~g~~~~~~~~~~~~~~l~~av 410 (468)
.++..+++ ||.- -|.| +..|++++|+| ++++.-++ ..+.. +| -|+.++ -.+.++++++|
T Consensus 371 aly~~ADv--fvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~---G~~~~----l~~~allVn----P~D~~~lA~AI 437 (797)
T PLN03063 371 ALYAITDV--MLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFA---GAGQS----LGAGALLVN----PWNITEVSSAI 437 (797)
T ss_pred HHHHhCCE--EEeCccccccCcchhhHheeecCCCCCEEeeCCc---Cchhh----hcCCeEEEC----CCCHHHHHHHH
Confidence 57777777 6643 4876 66799999999 44443322 12211 23 467776 36899999999
Q ss_pred HHHhcCchHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHhc
Q 012217 411 REMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEILLS 457 (468)
Q Consensus 411 ~~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~~~~~~~ 457 (468)
.++|..+.. +.+++.+++.+.+++ -+...-.++|++.+.+.
T Consensus 438 ~~aL~m~~~-er~~r~~~~~~~v~~-----~~~~~Wa~~fl~~l~~~ 478 (797)
T PLN03063 438 KEALNMSDE-ERETRHRHNFQYVKT-----HSAQKWADDFMSELNDI 478 (797)
T ss_pred HHHHhCCHH-HHHHHHHHHHHhhhh-----CCHHHHHHHHHHHHHHH
Confidence 999973311 344555555555554 24555566677766554
No 155
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=66.64 E-value=10 Score=36.56 Aligned_cols=38 Identities=13% Similarity=0.278 Sum_probs=29.3
Q ss_pred cEEEEEcCC--------CCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 11 VHAVCIPSP--------FQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 11 ~~il~~p~p--------~~GHi~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
|+|++++.. ..|--.-...|++.|.++||+|++++...
T Consensus 1 MkI~~i~~~~~~~~~~~~GG~~~~~~~l~~~L~~~g~~V~v~~~~~ 46 (335)
T cd03802 1 MRIALVAPPREPVPPPAYGGTERVVAALTEGLVARGHEVTLFASGD 46 (335)
T ss_pred CeEEEEcCCcccCCCcccCcHHHHHHHHHHHHHhcCceEEEEecCC
Confidence 477776642 34455668999999999999999998754
No 156
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=66.50 E-value=20 Score=33.14 Aligned_cols=94 Identities=12% Similarity=0.104 Sum_probs=53.1
Q ss_pred CCceEEEeecCCc---CCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhc----Cc-eEecc--cCh
Q 012217 268 PKSVIYVNFGSFI---FMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKE----KG-FVASW--CPQ 337 (468)
Q Consensus 268 ~~~vv~vs~GS~~---~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~----~~-~v~~~--~p~ 337 (468)
+++.|.|..|+.. .++.+.+.++++.|.+.+..+++..+.. +. .....+...+ ++ .+.+- +.+
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~l~e 176 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPE------EQ-EKEIADQIAAGLQNPVINLAGKTSLRE 176 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSH------HH-HHHHHHHHHTTHTTTTEEETTTS-HHH
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccch------HH-HHHHHHHHHHhcccceEeecCCCCHHH
Confidence 4457777777753 5678999999999988886655444322 00 0111122222 22 22222 333
Q ss_pred -HHhhcCCCcceeeeccChhhHHHHHhcCCcEEec
Q 012217 338 -EEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICW 371 (468)
Q Consensus 338 -~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~ 371 (468)
..++.++++ ||+.- .|.++=|.+.|+|+|++
T Consensus 177 ~~ali~~a~~--~I~~D-tg~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 177 LAALISRADL--VIGND-TGPMHLAAALGTPTVAL 208 (247)
T ss_dssp HHHHHHTSSE--EEEES-SHHHHHHHHTT--EEEE
T ss_pred HHHHHhcCCE--EEecC-ChHHHHHHHHhCCEEEE
Confidence 468889987 88874 58899999999999998
No 157
>PRK00654 glgA glycogen synthase; Provisional
Probab=64.64 E-value=10 Score=39.20 Aligned_cols=37 Identities=14% Similarity=0.095 Sum_probs=28.1
Q ss_pred cEEEEEcCC------CCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012217 11 VHAVCIPSP------FQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 11 ~~il~~p~p------~~GHi~P~l~La~~L~~rGh~Vt~~t~~ 47 (468)
|+|+++++= ..|--.-.-.|+++|+++||+|+++++.
T Consensus 1 m~i~~vs~e~~P~~k~GGl~~~v~~L~~~L~~~G~~V~v~~p~ 43 (466)
T PRK00654 1 MKILFVASECAPLIKTGGLGDVVGALPKALAALGHDVRVLLPG 43 (466)
T ss_pred CeEEEEEcccccCcccCcHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 367776642 3455556689999999999999999974
No 158
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=64.51 E-value=20 Score=33.83 Aligned_cols=42 Identities=19% Similarity=0.192 Sum_probs=33.2
Q ss_pred ceEecccChHHhhcCCCcceeeeccChhhHHHHHhcCCcEEecCC
Q 012217 329 GFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPF 373 (468)
Q Consensus 329 ~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~ 373 (468)
+.+.+-.+-.+++.+++. +||-.+ ..-.||+.+|+|++++..
T Consensus 185 ~~~~~~~~~~~Ll~~s~~--VvtinS-tvGlEAll~gkpVi~~G~ 226 (269)
T PF05159_consen 185 VIIDDDVNLYELLEQSDA--VVTINS-TVGLEALLHGKPVIVFGR 226 (269)
T ss_pred EEECCCCCHHHHHHhCCE--EEEECC-HHHHHHHHcCCceEEecC
Confidence 344456787899999997 777644 577899999999999865
No 159
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=62.41 E-value=1.5e+02 Score=28.67 Aligned_cols=81 Identities=19% Similarity=0.275 Sum_probs=56.8
Q ss_pred cCceEe-cccC---hHHhhcCCCcceeeec--cChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCC
Q 012217 327 EKGFVA-SWCP---QEEVLKHPSIGGFLTH--CGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDED 400 (468)
Q Consensus 327 ~~~~v~-~~~p---~~~il~~~~~~~~v~h--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~ 400 (468)
+++.+. +++| +.++|+.|+++-|+|+ =|.|++.-.+..|||+++-- +-+.+.... +. |+-+-... +.
T Consensus 206 ~~~~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~r---~n~fwqdl~-e~-gv~Vlf~~--d~ 278 (322)
T PRK02797 206 ENFQILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLSR---DNPFWQDLT-EQ-GLPVLFTG--DD 278 (322)
T ss_pred ccEEehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEec---CCchHHHHH-hC-CCeEEecC--Cc
Confidence 577765 4665 5679999999888876 48999999999999999862 334444433 33 66654444 67
Q ss_pred cchhHHHHHHHHHh
Q 012217 401 VIRNEVEKLVREMM 414 (468)
Q Consensus 401 ~~~~~l~~av~~~l 414 (468)
++...+.++=+++.
T Consensus 279 L~~~~v~e~~rql~ 292 (322)
T PRK02797 279 LDEDIVREAQRQLA 292 (322)
T ss_pred ccHHHHHHHHHHHH
Confidence 78888777655443
No 160
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=62.18 E-value=13 Score=37.03 Aligned_cols=36 Identities=14% Similarity=0.179 Sum_probs=26.2
Q ss_pred EEEEEcCC-C-CccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012217 12 HAVCIPSP-F-QSHIKAMLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 12 ~il~~p~p-~-~GHi~P~l~La~~L~~rGh~Vt~~t~~ 47 (468)
+|+++... . .|=-.-...||++|+++||+|+++++.
T Consensus 2 kIl~~~~~~~~gG~e~~~~~la~~L~~~G~~V~v~~~~ 39 (392)
T cd03805 2 RVAFIHPDLGIGGAERLVVDAALALQSRGHEVTIYTSH 39 (392)
T ss_pred eEEEECCCCCCchHHHHHHHHHHHHHhCCCeEEEEcCC
Confidence 56666432 2 333345589999999999999999874
No 161
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=61.38 E-value=47 Score=32.25 Aligned_cols=131 Identities=11% Similarity=-0.062 Sum_probs=74.7
Q ss_pred ceEE-EeecCCc--CCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEec--ccCh-HHhhcC
Q 012217 270 SVIY-VNFGSFI--FMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVAS--WCPQ-EEVLKH 343 (468)
Q Consensus 270 ~vv~-vs~GS~~--~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~p~-~~il~~ 343 (468)
+.|. +-.||.. .++.+.+.++++.+.+.|.++++..+... +...-+.+.+.. .++.+++ .+.+ ..++.+
T Consensus 179 ~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~----e~~~~~~i~~~~-~~~~l~g~~sL~elaali~~ 253 (322)
T PRK10964 179 PYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEH----EEQRAKRLAEGF-PYVEVLPKLSLEQVARVLAG 253 (322)
T ss_pred CeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHH----HHHHHHHHHccC-CcceecCCCCHHHHHHHHHh
Confidence 3444 4444442 57889999999999777777665444320 000111121111 1233333 2344 458999
Q ss_pred CCcceeeeccChhhHHHHHhcCCcEEecCCCCCccc------chhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhc
Q 012217 344 PSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPT------NGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMME 415 (468)
Q Consensus 344 ~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~------na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~ 415 (468)
+++ ||+.. .|.++=|.+.|+|+|++=--.|... |...+ .- ..-. ...+++|+|-++++++|+
T Consensus 254 a~l--~I~nD-SGp~HlA~A~g~p~valfGpt~p~~~~p~~~~~~~~-~~--~~~c----m~~I~~e~V~~~~~~~l~ 321 (322)
T PRK10964 254 AKA--VVSVD-TGLSHLTAALDRPNITLYGPTDPGLIGGYGKNQHAC-RS--PGKS----MADLSAETVFQKLETLIS 321 (322)
T ss_pred CCE--EEecC-CcHHHHHHHhCCCEEEEECCCCcccccCCCCCceee-cC--CCcc----cccCCHHHHHHHHHHHhh
Confidence 998 99885 5889999999999998711111111 11111 10 0111 247899999999988773
No 162
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=61.20 E-value=90 Score=27.04 Aligned_cols=28 Identities=14% Similarity=0.256 Sum_probs=22.4
Q ss_pred CCCcceeeeccCh------hhHHHHHhcCCcEEecC
Q 012217 343 HPSIGGFLTHCGW------NSIVESLCSGVPMICWP 372 (468)
Q Consensus 343 ~~~~~~~v~hgG~------~s~~eal~~GvP~v~~P 372 (468)
.+.+ +++|+|- +.+.+|...++|+|++.
T Consensus 63 ~~~v--~~~t~GpG~~n~~~~l~~A~~~~~Pvl~I~ 96 (164)
T cd07039 63 KLGV--CLGSSGPGAIHLLNGLYDAKRDRAPVLAIA 96 (164)
T ss_pred CCEE--EEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 3444 8888884 47789999999999995
No 163
>PLN02846 digalactosyldiacylglycerol synthase
Probab=60.99 E-value=13 Score=38.38 Aligned_cols=38 Identities=24% Similarity=0.223 Sum_probs=30.1
Q ss_pred CcEEEEEcC---C-CCccHHHHHHHHHHHHhCC-CEEEEEeCC
Q 012217 10 KVHAVCIPS---P-FQSHIKAMLKLAKLLHHKG-FHITFVNTE 47 (468)
Q Consensus 10 ~~~il~~p~---p-~~GHi~P~l~La~~L~~rG-h~Vt~~t~~ 47 (468)
+|||++|+- | .-|=..-.+.++..|+++| |+|+++.+.
T Consensus 4 ~mrIaivTdt~lP~vnGva~s~~~~a~~L~~~G~heV~vvaP~ 46 (462)
T PLN02846 4 KQHIAIFTTASLPWMTGTAVNPLFRAAYLAKDGDREVTLVIPW 46 (462)
T ss_pred CCEEEEEEcCCCCCCCCeeccHHHHHHHHHhcCCcEEEEEecC
Confidence 789999985 3 3444466677788999999 899999884
No 164
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=60.02 E-value=9.9 Score=37.00 Aligned_cols=29 Identities=17% Similarity=0.299 Sum_probs=26.0
Q ss_pred CCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012217 19 PFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 19 p~~GHi~P~l~La~~L~~rGh~Vt~~t~~ 47 (468)
...|+......|++.|.++||+|++++..
T Consensus 10 ~~gG~~~~~~~l~~~L~~~g~~v~v~~~~ 38 (360)
T cd04951 10 GLGGAEKQVVDLADQFVAKGHQVAIISLT 38 (360)
T ss_pred CCCCHHHHHHHHHHhcccCCceEEEEEEe
Confidence 45899999999999999999999999753
No 165
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=59.46 E-value=14 Score=37.97 Aligned_cols=64 Identities=14% Similarity=0.239 Sum_probs=42.7
Q ss_pred ccChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCchHHHHHHHH
Q 012217 352 HCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKA 426 (468)
Q Consensus 352 hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a 426 (468)
|=| -++.||+++|+|+++. ++.-=+..+ ...-.|.-++. +.-....+++++.++..|+ +++.+.
T Consensus 377 ~FG-iv~IEAMa~glPvvAt----~~GGP~EiV-~~~~tG~l~dp--~~e~~~~~a~~~~kl~~~p---~l~~~~ 440 (495)
T KOG0853|consen 377 HFG-IVPIEAMACGLPVVAT----NNGGPAEIV-VHGVTGLLIDP--GQEAVAELADALLKLRRDP---ELWARM 440 (495)
T ss_pred Ccc-ceeHHHHhcCCCEEEe----cCCCceEEE-EcCCcceeeCC--chHHHHHHHHHHHHHhcCH---HHHHHH
Confidence 444 3789999999999997 444445454 44455766653 2222337999999999998 554443
No 166
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=58.67 E-value=20 Score=26.92 Aligned_cols=34 Identities=24% Similarity=0.319 Sum_probs=31.1
Q ss_pred cEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEE
Q 012217 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFV 44 (468)
Q Consensus 11 ~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~ 44 (468)
.-++++..+...|..-+-.+|+.|+++|+.|...
T Consensus 16 k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~ 49 (79)
T PF12146_consen 16 KAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAY 49 (79)
T ss_pred CEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 4788888899999999999999999999999866
No 167
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=58.40 E-value=57 Score=31.80 Aligned_cols=96 Identities=10% Similarity=0.077 Sum_probs=59.8
Q ss_pred CCceEEEeecCC----cCCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCce-Eec--ccCh-HH
Q 012217 268 PKSVIYVNFGSF----IFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGF-VAS--WCPQ-EE 339 (468)
Q Consensus 268 ~~~vv~vs~GS~----~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~--~~p~-~~ 339 (468)
.++.|.+.-|+. -.++.+.+.++++.|.+.+.+++.. +... + ...-+.+.+..+.++. +.+ -+.+ ..
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~-G~~~---e-~~~~~~i~~~~~~~~~~l~g~~sL~el~a 247 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLF-GSAK---D-HPAGNEIEALLPGELRNLAGETSLDEAVD 247 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEE-EChh---h-HHHHHHHHHhCCcccccCCCCCCHHHHHH
Confidence 346888887763 2567889999999987767776644 4321 1 0011122222222222 222 2334 46
Q ss_pred hhcCCCcceeeeccChhhHHHHHhcCCcEEec
Q 012217 340 VLKHPSIGGFLTHCGWNSIVESLCSGVPMICW 371 (468)
Q Consensus 340 il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~ 371 (468)
++.+++. ||+. -.|-++=|.+.|+|+|++
T Consensus 248 li~~a~l--~I~~-DSGp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 248 LIALAKA--VVTN-DSGLMHVAAALNRPLVAL 276 (334)
T ss_pred HHHhCCE--EEee-CCHHHHHHHHcCCCEEEE
Confidence 8888987 9887 457888899999999975
No 168
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=58.35 E-value=33 Score=27.65 Aligned_cols=42 Identities=21% Similarity=0.299 Sum_probs=35.1
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHH
Q 012217 12 HAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRL 53 (468)
Q Consensus 12 ~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~ 53 (468)
++++...+..-|-.-+..++..|.++||+|.++-.....+.+
T Consensus 2 ~v~~~~~~~~~~~lGl~~la~~l~~~G~~v~~~d~~~~~~~l 43 (121)
T PF02310_consen 2 RVVLACVPGEVHPLGLLYLAAYLRKAGHEVDILDANVPPEEL 43 (121)
T ss_dssp EEEEEEBTTSSTSHHHHHHHHHHHHTTBEEEEEESSB-HHHH
T ss_pred EEEEEeeCCcchhHHHHHHHHHHHHCCCeEEEECCCCCHHHH
Confidence 789999999999999999999999999999999554433333
No 169
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=57.91 E-value=27 Score=33.38 Aligned_cols=77 Identities=10% Similarity=0.226 Sum_probs=57.8
Q ss_pred CCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHH
Q 012217 281 FMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVE 360 (468)
Q Consensus 281 ~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~e 360 (468)
..+.+..+++.+++.+...+.||.++++. .-..+.++++...+-.||.+ ||-..-..+++-
T Consensus 45 ~s~~~Ra~dL~~a~~d~~i~aI~~~rGG~-----------------ga~rlL~~ld~~~~~~~pK~--~iGySDiTaL~~ 105 (282)
T cd07025 45 GTDEERAADLNAAFADPEIKAIWCARGGY-----------------GANRLLPYLDYDLIRANPKI--FVGYSDITALHL 105 (282)
T ss_pred CCHHHHHHHHHHHhhCCCCCEEEEcCCcC-----------------CHHHhhhhCCHHHHhhCCeE--EEEecHHHHHHH
Confidence 44567789999999999999999998762 12345566666777778877 888888888887
Q ss_pred HHhc--CCcEEecCCCCC
Q 012217 361 SLCS--GVPMICWPFTGD 376 (468)
Q Consensus 361 al~~--GvP~v~~P~~~D 376 (468)
+++. |++.+--|+..+
T Consensus 106 ~l~~~~g~~t~hGp~~~~ 123 (282)
T cd07025 106 ALYAKTGLVTFHGPMLAS 123 (282)
T ss_pred HHHHhcCceEEECccccc
Confidence 7753 888888887543
No 170
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=57.82 E-value=44 Score=32.82 Aligned_cols=98 Identities=13% Similarity=0.165 Sum_probs=61.3
Q ss_pred CCceEEEeecCCc---CCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhc-Cce-Eecc--cCh-HH
Q 012217 268 PKSVIYVNFGSFI---FMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKE-KGF-VASW--CPQ-EE 339 (468)
Q Consensus 268 ~~~vv~vs~GS~~---~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~-~~~-v~~~--~p~-~~ 339 (468)
.++.|.|..|+.. .++.+.+.++++.|.+.+.++++.-++... +...-+.+.+..+. ++. +++- +.+ ..
T Consensus 180 ~~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~---e~~~~~~i~~~~~~~~~~~l~g~~sL~el~a 256 (344)
T TIGR02201 180 GQNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKD---ELAMVNEIAQGCQTPRVTSLAGKLTLPQLAA 256 (344)
T ss_pred CCCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHH---HHHHHHHHHhhCCCCcccccCCCCCHHHHHH
Confidence 3457777777753 567889999999997778887655432200 00011122222111 121 2222 334 45
Q ss_pred hhcCCCcceeeeccChhhHHHHHhcCCcEEec
Q 012217 340 VLKHPSIGGFLTHCGWNSIVESLCSGVPMICW 371 (468)
Q Consensus 340 il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~ 371 (468)
++.++++ ||+. -.|.++=|.+.|+|+|++
T Consensus 257 li~~a~l--~Vs~-DSGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 257 LIDHARL--FIGV-DSVPMHMAAALGTPLVAL 285 (344)
T ss_pred HHHhCCE--EEec-CCHHHHHHHHcCCCEEEE
Confidence 8889998 9998 678999999999999986
No 171
>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair]
Probab=57.50 E-value=20 Score=33.68 Aligned_cols=46 Identities=15% Similarity=0.179 Sum_probs=41.1
Q ss_pred cEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhh
Q 012217 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKA 56 (468)
Q Consensus 11 ~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~ 56 (468)
--++++-.|+.|-..=..+||.+|.++|+.|+|++.+.....+..+
T Consensus 106 ~nl~l~G~~G~GKThLa~Ai~~~l~~~g~sv~f~~~~el~~~Lk~~ 151 (254)
T COG1484 106 ENLVLLGPPGVGKTHLAIAIGNELLKAGISVLFITAPDLLSKLKAA 151 (254)
T ss_pred CcEEEECCCCCcHHHHHHHHHHHHHHcCCeEEEEEHHHHHHHHHHH
Confidence 3688888899999999999999999889999999999888877765
No 172
>PLN02470 acetolactate synthase
Probab=56.30 E-value=85 Score=33.51 Aligned_cols=90 Identities=10% Similarity=0.087 Sum_probs=51.8
Q ss_pred eecCCcCCC--HHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHh-h-cCceEec--------ccChHHhhc
Q 012217 275 NFGSFIFMN--KQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKA-K-EKGFVAS--------WCPQEEVLK 342 (468)
Q Consensus 275 s~GS~~~~~--~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~-~-~~~~v~~--------~~p~~~il~ 342 (468)
+|||....+ ...-+.+++.|++.|.+.++-+.+... ..+.+.+ . +++.++. ++-...-..
T Consensus 2 ~~~~~~~~~~~~~~a~~l~~~L~~~GV~~vFg~pG~~~--------~~l~dal~~~~~i~~i~~rhE~~A~~~Adgyar~ 73 (585)
T PLN02470 2 TFQSRFAPDEPRKGADILVEALEREGVDTVFAYPGGAS--------MEIHQALTRSNCIRNVLCRHEQGEVFAAEGYAKA 73 (585)
T ss_pred CcccCCCCCccccHHHHHHHHHHHcCCCEEEEcCCccc--------HHHHHHHhccCCceEEEeccHHHHHHHHHHHHHH
Confidence 577765333 233566888888888888888765421 1122222 1 1232221 111111112
Q ss_pred CCCcceeeeccChh------hHHHHHhcCCcEEecC
Q 012217 343 HPSIGGFLTHCGWN------SIVESLCSGVPMICWP 372 (468)
Q Consensus 343 ~~~~~~~v~hgG~~------s~~eal~~GvP~v~~P 372 (468)
+-.++++++|.|-| .+++|...++|+|++.
T Consensus 74 tg~~gv~~~t~GPG~~N~l~gia~A~~~~~Pvl~I~ 109 (585)
T PLN02470 74 SGKVGVCIATSGPGATNLVTGLADALLDSVPLVAIT 109 (585)
T ss_pred hCCCEEEEECCCccHHHHHHHHHHHHhcCCcEEEEe
Confidence 22455588998854 7889999999999994
No 173
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=53.78 E-value=64 Score=31.72 Aligned_cols=45 Identities=11% Similarity=0.153 Sum_probs=39.9
Q ss_pred cEEEEEcCCCCccHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHh
Q 012217 11 VHAVCIPSPFQSHIKAMLKLAKLLHHK--GFHITFVNTEFNHRRLLK 55 (468)
Q Consensus 11 ~~il~~p~p~~GHi~P~l~La~~L~~r--Gh~Vt~~t~~~~~~~~~~ 55 (468)
|+|+++-..+.|++.=...+.+.|+++ +.+|++++.+.+.+.++.
T Consensus 1 mrILii~~~~iGD~il~tP~l~~Lk~~~P~a~I~~l~~~~~~~l~~~ 47 (348)
T PRK10916 1 MKILVIGPSWVGDMMMSQSLYRTLKARYPQAIIDVMAPAWCRPLLSR 47 (348)
T ss_pred CcEEEEccCcccHHHhHHHHHHHHHHHCCCCeEEEEechhhHHHHhc
Confidence 379999999999999999999999996 999999999877766554
No 174
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=53.42 E-value=71 Score=31.49 Aligned_cols=97 Identities=12% Similarity=0.167 Sum_probs=60.5
Q ss_pred CceEEEeecCC---cCCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhh-cCc-eEecc--cCh-HHh
Q 012217 269 KSVIYVNFGSF---IFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAK-EKG-FVASW--CPQ-EEV 340 (468)
Q Consensus 269 ~~vv~vs~GS~---~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~-~~~-~v~~~--~p~-~~i 340 (468)
++.|.|.-|+. ..++.+.+.++++.|.+.+.++++.-++... + ...-..+.+... .++ -+.+- +.+ ..+
T Consensus 183 ~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~--e-~~~~~~i~~~~~~~~~~~l~g~~sL~el~al 259 (352)
T PRK10422 183 QNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKD--D-LACVNEIAQGCQTPPVTALAGKTTFPELGAL 259 (352)
T ss_pred CCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChH--H-HHHHHHHHHhcCCCccccccCCCCHHHHHHH
Confidence 45777887875 3567899999999998778887765443210 0 000011211111 111 12232 334 468
Q ss_pred hcCCCcceeeeccChhhHHHHHhcCCcEEec
Q 012217 341 LKHPSIGGFLTHCGWNSIVESLCSGVPMICW 371 (468)
Q Consensus 341 l~~~~~~~~v~hgG~~s~~eal~~GvP~v~~ 371 (468)
+.++++ ||++ -.|-++=|.+.|+|+|++
T Consensus 260 i~~a~l--~v~n-DSGp~HlAaA~g~P~v~l 287 (352)
T PRK10422 260 IDHAQL--FIGV-DSAPAHIAAAVNTPLICL 287 (352)
T ss_pred HHhCCE--EEec-CCHHHHHHHHcCCCEEEE
Confidence 989998 9987 457888899999999876
No 175
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=53.42 E-value=19 Score=32.03 Aligned_cols=26 Identities=27% Similarity=0.294 Sum_probs=25.0
Q ss_pred CCccHHHHHHHHHHHHhCCCEEEEEe
Q 012217 20 FQSHIKAMLKLAKLLHHKGFHITFVN 45 (468)
Q Consensus 20 ~~GHi~P~l~La~~L~~rGh~Vt~~t 45 (468)
..|+-.....|++.|.++||+|+++.
T Consensus 12 ~~G~~~~~~~l~~~L~~~g~~v~v~~ 37 (229)
T cd01635 12 GGGVELVLLDLAKALARRGHEVEVVA 37 (229)
T ss_pred CCCchhHHHHHHHHHHHcCCeEEEEE
Confidence 77999999999999999999999998
No 176
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=53.14 E-value=21 Score=36.82 Aligned_cols=38 Identities=11% Similarity=0.175 Sum_probs=27.2
Q ss_pred cEEEEEcCC------CCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 11 VHAVCIPSP------FQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 11 ~~il~~p~p------~~GHi~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
|||+++++= ..|=-.-.-.|+++|+++||+|.++++..
T Consensus 1 m~i~~vs~E~~P~~k~GGl~~~v~~L~~aL~~~G~~v~v~~p~y 44 (473)
T TIGR02095 1 MRVLFVAAEMAPFAKTGGLADVVGALPKALAALGHDVRVLLPAY 44 (473)
T ss_pred CeEEEEEeccccccCcCcHHHHHHHHHHHHHHcCCeEEEEecCC
Confidence 367777642 23333445789999999999999999753
No 177
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=53.07 E-value=37 Score=30.62 Aligned_cols=42 Identities=17% Similarity=0.095 Sum_probs=36.1
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchH
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHR 51 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~ 51 (468)
+.+|++.+.++-.|-....-++..|..+|++|+.+-..-..+
T Consensus 82 ~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~ 123 (201)
T cd02070 82 KGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPE 123 (201)
T ss_pred CCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHH
Confidence 679999999999999999999999999999998875543333
No 178
>cd07062 Peptidase_S66_mccF_like Microcin C7 self-immunity protein determines resistance to exogenous microcin C7. Microcin C7 self-immunity protein (mccF): MccF, a homolog of the LD-carboxypeptidase family, mediates resistance against exogenously added microcin C7 (MccC7), a ribosomally-encoded peptide antibiotic that contains a phosphoramidate linkage to adenosine monophosphate at its C-terminus. The plasmid-encoded mccF gene is transcribed in the opposite direction to the other five genes (mccA-E) and is required for the full expression of immunity but not for production. The catalytic triad residues (Ser, His, Glu) of LD-carboxypeptidase are also conserved in MccF, strongly suggesting that MccF shares the hydrolytic activity with LD-carboxypeptidases. Substrates of MccF have not been deduced, but could likely be microcin C7 precursors. The possible role of MccF is to defend producer cells against exogenous microcin from re-entering after having been exported. It is suggested that M
Probab=51.25 E-value=39 Score=32.82 Aligned_cols=76 Identities=11% Similarity=0.082 Sum_probs=56.2
Q ss_pred CCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHH
Q 012217 281 FMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVE 360 (468)
Q Consensus 281 ~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~e 360 (468)
..+.+..+++.+++.+...+.||.++++. +-..+.++++...|-.||.+ ||-..-..+++-
T Consensus 49 g~~~~Ra~dL~~a~~Dp~i~aI~~~rGG~-----------------g~~rlL~~lD~~~i~~~PK~--fiGySDiTaL~~ 109 (308)
T cd07062 49 ASPEERAEELMAAFADPSIKAIIPTIGGD-----------------DSNELLPYLDYELIKKNPKI--FIGYSDITALHL 109 (308)
T ss_pred CCHHHHHHHHHHHhcCCCCCEEEECCccc-----------------CHhhhhhhcCHHHHhhCCCE--EEeccHHHHHHH
Confidence 34567789999999999999999998762 22345666677777777876 888888777777
Q ss_pred HHh--cCCcEEecCCCC
Q 012217 361 SLC--SGVPMICWPFTG 375 (468)
Q Consensus 361 al~--~GvP~v~~P~~~ 375 (468)
+++ +|++.+--|+..
T Consensus 110 al~~~~g~~t~hGp~~~ 126 (308)
T cd07062 110 AIYKKTGLVTYYGPNLL 126 (308)
T ss_pred HHHHhcCCeEEECcccc
Confidence 773 477777777754
No 179
>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed
Probab=49.91 E-value=37 Score=30.51 Aligned_cols=43 Identities=7% Similarity=-0.079 Sum_probs=32.4
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHH
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRR 52 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~ 52 (468)
..+|++--.++.|=+.-...|++.|.++||+|+++.++...+.
T Consensus 5 ~k~IllgVTGsiaa~k~a~~lir~L~k~G~~V~vv~T~aA~~~ 47 (196)
T PRK08305 5 GKRIGFGLTGSHCTYDEVMPEIEKLVDEGAEVTPIVSYTVQTT 47 (196)
T ss_pred CCEEEEEEcCHHHHHHHHHHHHHHHHhCcCEEEEEECHhHHHH
Confidence 3477776666555444369999999999999999999765543
No 180
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate (SEPHCHC) synthase (MenD) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dim
Probab=47.62 E-value=49 Score=28.73 Aligned_cols=27 Identities=30% Similarity=0.573 Sum_probs=21.8
Q ss_pred CCcceeeeccChh------hHHHHHhcCCcEEecC
Q 012217 344 PSIGGFLTHCGWN------SIVESLCSGVPMICWP 372 (468)
Q Consensus 344 ~~~~~~v~hgG~~------s~~eal~~GvP~v~~P 372 (468)
+.+ +++|+|-| .+.||...++|+|++.
T Consensus 61 ~gv--~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 93 (162)
T cd07037 61 PVA--VVCTSGTAVANLLPAVVEAYYSGVPLLVLT 93 (162)
T ss_pred CEE--EEECCchHHHHHhHHHHHHHhcCCCEEEEE
Confidence 555 88888844 6779999999999993
No 181
>PF02951 GSH-S_N: Prokaryotic glutathione synthetase, N-terminal domain; InterPro: IPR004215 Prokaryotic glutathione synthetase 6.3.2.3 from EC (glutathione synthase) catalyses the conversion of gamma-L-glutamyl-L-cysteine and glycine to orthophosphate and glutathione in the presence of ATP. This is the second step in glutathione biosynthesis. The enzyme is inhibited by 7,8-dihydrofolate, methotrexate and trimethoprim. This domain is the N terminus of the enzyme.; GO: 0004363 glutathione synthase activity, 0006750 glutathione biosynthetic process; PDB: 1GLV_A 1GSA_A 1GSH_A 2GLT_A.
Probab=47.55 E-value=34 Score=28.04 Aligned_cols=37 Identities=11% Similarity=0.180 Sum_probs=23.3
Q ss_pred EEEEEcCCCCc---cHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 12 HAVCIPSPFQS---HIKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 12 ~il~~p~p~~G---Hi~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
+|+|+--|-.+ .-.-.+.|+.+-.+|||+|.++....
T Consensus 2 ki~fvmDpi~~i~~~kDTT~alm~eAq~RGhev~~~~~~d 41 (119)
T PF02951_consen 2 KIAFVMDPIESIKPYKDTTFALMLEAQRRGHEVFYYEPGD 41 (119)
T ss_dssp EEEEEES-GGG--TTT-HHHHHHHHHHHTT-EEEEE-GGG
T ss_pred eEEEEeCCHHHCCCCCChHHHHHHHHHHCCCEEEEEEcCc
Confidence 45555544333 23456788999999999999998754
No 182
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=47.46 E-value=44 Score=36.80 Aligned_cols=110 Identities=11% Similarity=0.050 Sum_probs=63.5
Q ss_pred ecccChHH---hhcCCCcceeeec---cChh-hHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchh
Q 012217 332 ASWCPQEE---VLKHPSIGGFLTH---CGWN-SIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRN 404 (468)
Q Consensus 332 ~~~~p~~~---il~~~~~~~~v~h---gG~~-s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~ 404 (468)
.+++++.+ ++..+++ ||.- -|.| ++.|++++|+|-.+.|+..+--.-+..+ .-|+.++ -.+.+
T Consensus 347 ~~~~~~~~l~~ly~~aDv--~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l----~~~llv~----P~d~~ 416 (726)
T PRK14501 347 YRSLPFEELVALYRAADV--ALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAEL----AEALLVN----PNDIE 416 (726)
T ss_pred eCCCCHHHHHHHHHhccE--EEecccccccCcccceEEEEcCCCCceEEEecccchhHHh----CcCeEEC----CCCHH
Confidence 35677664 6667777 5543 3554 7789999977522222222111112222 2266665 35799
Q ss_pred HHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHhc
Q 012217 405 EVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEILLS 457 (468)
Q Consensus 405 ~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~~~~~~~ 457 (468)
+++++|.++|..+.. +.+++.+++.+.+++ -+...-.++|++.+.+.
T Consensus 417 ~la~ai~~~l~~~~~-e~~~r~~~~~~~v~~-----~~~~~w~~~~l~~l~~~ 463 (726)
T PRK14501 417 GIAAAIKRALEMPEE-EQRERMQAMQERLRR-----YDVHKWASDFLDELREA 463 (726)
T ss_pred HHHHHHHHHHcCCHH-HHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHHH
Confidence 999999999975421 334444444444432 35666677777777665
No 183
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=47.26 E-value=2.6e+02 Score=26.55 Aligned_cols=91 Identities=16% Similarity=0.187 Sum_probs=55.1
Q ss_pred eEEEeecCCc--CCCHHHHH----HHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCc-----eE-----ecc
Q 012217 271 VIYVNFGSFI--FMNKQQLI----EVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKG-----FV-----ASW 334 (468)
Q Consensus 271 vv~vs~GS~~--~~~~~~~~----~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~-----~v-----~~~ 334 (468)
|-.+-.|+.. ....++.. -+.+.+++.|-+|+...... -|+....-++.|. .+ .++
T Consensus 164 vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRR--------Tp~~~~s~l~~~l~s~~~i~w~~~d~g~ 235 (329)
T COG3660 164 VAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRR--------TPDTVKSILKNNLNSSPGIVWNNEDTGY 235 (329)
T ss_pred EEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecC--------CcHHHHHHHHhccccCceeEeCCCCCCC
Confidence 4444455543 33333333 35566777888888887644 2333222222211 11 234
Q ss_pred cChHHhhcCCCcceeeeccC-hhhHHHHHhcCCcEEec
Q 012217 335 CPQEEVLKHPSIGGFLTHCG-WNSIVESLCSGVPMICW 371 (468)
Q Consensus 335 ~p~~~il~~~~~~~~v~hgG-~~s~~eal~~GvP~v~~ 371 (468)
=|+.++|+.++. +|.-.. .|-+.||.+.|+|+-++
T Consensus 236 NPY~~~La~Ady--ii~TaDSinM~sEAasTgkPv~~~ 271 (329)
T COG3660 236 NPYIDMLAAADY--IISTADSINMCSEAASTGKPVFIL 271 (329)
T ss_pred CchHHHHhhcce--EEEecchhhhhHHHhccCCCeEEE
Confidence 599999988876 666665 47788999999998764
No 184
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=47.13 E-value=3e+02 Score=27.24 Aligned_cols=82 Identities=18% Similarity=0.214 Sum_probs=59.8
Q ss_pred cCceEe-cccC---hHHhhcCCCcceeeec--cChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCC
Q 012217 327 EKGFVA-SWCP---QEEVLKHPSIGGFLTH--CGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDED 400 (468)
Q Consensus 327 ~~~~v~-~~~p---~~~il~~~~~~~~v~h--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~ 400 (468)
+++.+. +++| +..+|..|+++-|.+. =|.|++.-.+..|+|++.- .+-+.+- .+.+. |+-+-... +.
T Consensus 245 ~~~~iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~---~~np~~~-~l~~~-~ipVlf~~--d~ 317 (360)
T PF07429_consen 245 ENFQILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLS---RDNPFWQ-DLKEQ-GIPVLFYG--DE 317 (360)
T ss_pred cceeEhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEe---cCChHHH-HHHhC-CCeEEecc--cc
Confidence 466654 5776 5679999999777764 5899999999999999875 2333333 44244 66655543 68
Q ss_pred cchhHHHHHHHHHhc
Q 012217 401 VIRNEVEKLVREMME 415 (468)
Q Consensus 401 ~~~~~l~~av~~~l~ 415 (468)
++...|+++=+++..
T Consensus 318 L~~~~v~ea~rql~~ 332 (360)
T PF07429_consen 318 LDEALVREAQRQLAN 332 (360)
T ss_pred CCHHHHHHHHHHHhh
Confidence 999999999888764
No 185
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=46.71 E-value=49 Score=27.05 Aligned_cols=38 Identities=13% Similarity=0.295 Sum_probs=34.2
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012217 12 HAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFN 49 (468)
Q Consensus 12 ~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~ 49 (468)
||++.+.++-.|-.-..-++..|...|++|...-+...
T Consensus 1 ~vv~~~~~gd~H~lG~~~~~~~l~~~G~~vi~lG~~vp 38 (122)
T cd02071 1 RILVAKPGLDGHDRGAKVIARALRDAGFEVIYTGLRQT 38 (122)
T ss_pred CEEEEecCCChhHHHHHHHHHHHHHCCCEEEECCCCCC
Confidence 58999999999999999999999999999999976533
No 186
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=46.64 E-value=51 Score=29.60 Aligned_cols=46 Identities=13% Similarity=0.152 Sum_probs=38.8
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHh
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLK 55 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~ 55 (468)
+.+|++.+.++-.|-....-++..|..+|++|+.+-..-..+.+.+
T Consensus 84 ~~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~ 129 (197)
T TIGR02370 84 LGKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVE 129 (197)
T ss_pred CCeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHH
Confidence 5799999999999999999999999999999999876544443333
No 187
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=46.43 E-value=29 Score=33.64 Aligned_cols=30 Identities=13% Similarity=0.132 Sum_probs=26.6
Q ss_pred CCccHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012217 20 FQSHIKAMLKLAKLLHHKGFHITFVNTEFN 49 (468)
Q Consensus 20 ~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~ 49 (468)
..|.-.-...|++.|.++||+|+++++...
T Consensus 13 ~gG~~~~~~~l~~~L~~~g~~v~v~~~~~~ 42 (357)
T cd03795 13 RGGIEQVIRDLAEGLAARGIEVAVLCASPE 42 (357)
T ss_pred CCcHHHHHHHHHHHHHhCCCceEEEecCCC
Confidence 678888889999999999999999988644
No 188
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=46.33 E-value=91 Score=30.53 Aligned_cols=95 Identities=16% Similarity=0.162 Sum_probs=60.2
Q ss_pred CceEEEeec-CC---cCCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecc--cCh-HHhh
Q 012217 269 KSVIYVNFG-SF---IFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASW--CPQ-EEVL 341 (468)
Q Consensus 269 ~~vv~vs~G-S~---~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~p~-~~il 341 (468)
++.|.+.-| |. ..++.+.+.++++.|.+.+..+++..+.. + ...-+.+....+..+.+++- +.| ..++
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~~----e-~e~~~~i~~~~~~~~~l~~k~sL~e~~~li 249 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGPD----E-EERAEEIAKGLPNAVILAGKTSLEELAALI 249 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecChH----H-HHHHHHHHHhcCCccccCCCCCHHHHHHHH
Confidence 568888888 44 36788999999999999885555444321 0 11111222222222224443 344 3577
Q ss_pred cCCCcceeeeccChhhHHHHHhcCCcEEec
Q 012217 342 KHPSIGGFLTHCGWNSIVESLCSGVPMICW 371 (468)
Q Consensus 342 ~~~~~~~~v~hgG~~s~~eal~~GvP~v~~ 371 (468)
.+++. ||+. -.|-++=|.+.|+|+|++
T Consensus 250 ~~a~l--~I~~-DSg~~HlAaA~~~P~I~i 276 (334)
T COG0859 250 AGADL--VIGN-DSGPMHLAAALGTPTIAL 276 (334)
T ss_pred hcCCE--EEcc-CChHHHHHHHcCCCEEEE
Confidence 78886 7765 567888899999999987
No 189
>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=45.89 E-value=1.3e+02 Score=29.99 Aligned_cols=50 Identities=22% Similarity=0.345 Sum_probs=35.4
Q ss_pred ceEecccChH---HhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCCCcccchhh
Q 012217 329 GFVASWCPQE---EVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRY 383 (468)
Q Consensus 329 ~~v~~~~p~~---~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~ 383 (468)
+.+++|+||. .+|-.|++ .|| . |==|+.-|..+|+|.|=- .+=|.++|..
T Consensus 246 l~~lPF~~Q~~yD~LLw~cD~-NfV-R-GEDSfVRAqwAgkPFvWh--IYpQ~d~aHl 298 (374)
T PF10093_consen 246 LHVLPFVPQDDYDRLLWACDF-NFV-R-GEDSFVRAQWAGKPFVWH--IYPQEDDAHL 298 (374)
T ss_pred EEECCCCCHHHHHHHHHhCcc-ceE-e-cchHHHHHHHhCCCceEe--cCcCchhhHH
Confidence 4456899985 58988887 333 3 567999999999998743 3445566644
No 190
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=44.94 E-value=22 Score=31.61 Aligned_cols=30 Identities=13% Similarity=0.160 Sum_probs=19.8
Q ss_pred cCCCCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 17 PSPFQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 17 p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
+-.+.|.+ -..||+++..+|++||+++++.
T Consensus 24 tN~SSG~~--G~~lA~~~~~~Ga~V~li~g~~ 53 (185)
T PF04127_consen 24 TNRSSGKM--GAALAEEAARRGAEVTLIHGPS 53 (185)
T ss_dssp EES--SHH--HHHHHHHHHHTT-EEEEEE-TT
T ss_pred cCCCcCHH--HHHHHHHHHHCCCEEEEEecCc
Confidence 33344443 3678999999999999999874
No 191
>COG0801 FolK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]
Probab=44.74 E-value=44 Score=28.94 Aligned_cols=36 Identities=17% Similarity=0.098 Sum_probs=28.7
Q ss_pred eEEEeecCCcCCCHHHHHHHHHHHHcCCCCEEEEEc
Q 012217 271 VIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIR 306 (468)
Q Consensus 271 vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~ 306 (468)
.+|+++||......+.++..+.+|.+.+.--++...
T Consensus 3 ~vyl~LGSNlgd~~~~l~~A~~~L~~~~~~~v~~~S 38 (160)
T COG0801 3 RVYLGLGSNLGDRLKQLRAALAALDALADIRVVAVS 38 (160)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHhCCCceEEEec
Confidence 799999999887788899999999887754455544
No 192
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=44.25 E-value=35 Score=30.31 Aligned_cols=41 Identities=17% Similarity=0.220 Sum_probs=33.1
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHH
Q 012217 12 HAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRL 53 (468)
Q Consensus 12 ~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~ 53 (468)
+|++.-.++.|=+. ...+.+.|.++|++|.++.++...+.+
T Consensus 3 ~Ill~vtGsiaa~~-~~~li~~L~~~g~~V~vv~T~~A~~fi 43 (182)
T PRK07313 3 NILLAVSGSIAAYK-AADLTSQLTKRGYQVTVLMTKAATKFI 43 (182)
T ss_pred EEEEEEeChHHHHH-HHHHHHHHHHCCCEEEEEEChhHHHHc
Confidence 67777777776665 899999999999999999997665544
No 193
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=43.44 E-value=46 Score=32.73 Aligned_cols=96 Identities=10% Similarity=0.033 Sum_probs=59.5
Q ss_pred CCceEEEeecCC----cCCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhc----Cc-eEecc--cC
Q 012217 268 PKSVIYVNFGSF----IFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKE----KG-FVASW--CP 336 (468)
Q Consensus 268 ~~~vv~vs~GS~----~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~----~~-~v~~~--~p 336 (468)
.++.|.|.-|+. ..++.+.+.++++.|.+.+.++++. ++.. + ...-..+.+..+. ++ -+.+- +.
T Consensus 179 ~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~-Gg~~---e-~~~~~~i~~~~~~~~~~~~~~l~g~~sL~ 253 (348)
T PRK10916 179 ERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLF-GSAK---D-HEAGNEILAALNTEQQAWCRNLAGETQLE 253 (348)
T ss_pred CCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEE-eCHH---h-HHHHHHHHHhcccccccceeeccCCCCHH
Confidence 456888888773 2567889999999987667776654 3321 0 0011122222211 11 12222 33
Q ss_pred h-HHhhcCCCcceeeeccChhhHHHHHhcCCcEEec
Q 012217 337 Q-EEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICW 371 (468)
Q Consensus 337 ~-~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~ 371 (468)
+ ..++.++++ ||+. -.|-++=|.+.|+|+|++
T Consensus 254 el~ali~~a~l--~I~n-DTGp~HlAaA~g~P~val 286 (348)
T PRK10916 254 QAVILIAACKA--IVTN-DSGLMHVAAALNRPLVAL 286 (348)
T ss_pred HHHHHHHhCCE--EEec-CChHHHHHHHhCCCEEEE
Confidence 4 458889997 8887 568899999999999875
No 194
>PF09001 DUF1890: Domain of unknown function (DUF1890); InterPro: IPR012033 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function. The structure of the Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) protein has been determined but no evidence as to the function is available yet.; PDB: 1KJN_B.
Probab=42.83 E-value=28 Score=29.10 Aligned_cols=32 Identities=25% Similarity=0.279 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHhCCCEEEEEeCCcchHHHHhh
Q 012217 25 KAMLKLAKLLHHKGFHITFVNTEFNHRRLLKA 56 (468)
Q Consensus 25 ~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~ 56 (468)
--.+-|+..|.++||+|++..++.....++-+
T Consensus 14 p~alYl~~~Lk~~G~~v~Va~npAA~kLl~va 45 (139)
T PF09001_consen 14 PSALYLSYKLKKKGFEVVVAGNPAALKLLEVA 45 (139)
T ss_dssp HHHHHHHHHHHCTTEEEEEEE-HHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCeEEEecCHHHHhHhhhc
Confidence 34678999999999999999998888777765
No 195
>COG0771 MurD UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell envelope biogenesis, outer membrane]
Probab=41.05 E-value=1.2e+02 Score=31.19 Aligned_cols=35 Identities=14% Similarity=0.121 Sum_probs=30.4
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFN 49 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~ 49 (468)
.++|+++-.+-.| +..++.|.++|++|++.=...+
T Consensus 7 ~~kv~V~GLG~sG-----~a~a~~L~~~G~~v~v~D~~~~ 41 (448)
T COG0771 7 GKKVLVLGLGKSG-----LAAARFLLKLGAEVTVSDDRPA 41 (448)
T ss_pred CCEEEEEeccccc-----HHHHHHHHHCCCeEEEEcCCCC
Confidence 5699999999999 9999999999999999965433
No 196
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=40.61 E-value=39 Score=29.24 Aligned_cols=26 Identities=23% Similarity=0.303 Sum_probs=20.3
Q ss_pred eeeeccCh------hhHHHHHhcCCcEEecCC
Q 012217 348 GFLTHCGW------NSIVESLCSGVPMICWPF 373 (468)
Q Consensus 348 ~~v~hgG~------~s~~eal~~GvP~v~~P~ 373 (468)
++++|.|- +.+.+|...++|+|++.-
T Consensus 62 v~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~g 93 (162)
T cd07038 62 ALVTTYGVGELSALNGIAGAYAEHVPVVHIVG 93 (162)
T ss_pred EEEEcCCccHHHHHHHHHHHHHcCCCEEEEec
Confidence 37777664 467799999999999953
No 197
>PRK08322 acetolactate synthase; Reviewed
Probab=40.11 E-value=99 Score=32.65 Aligned_cols=26 Identities=23% Similarity=0.381 Sum_probs=21.4
Q ss_pred ceeeeccCh------hhHHHHHhcCCcEEecC
Q 012217 347 GGFLTHCGW------NSIVESLCSGVPMICWP 372 (468)
Q Consensus 347 ~~~v~hgG~------~s~~eal~~GvP~v~~P 372 (468)
+++++|.|- +.+.+|...++|+|++-
T Consensus 65 gv~~~t~GpG~~N~~~~i~~A~~~~~Pll~i~ 96 (547)
T PRK08322 65 GVCLSTLGPGATNLVTGVAYAQLGGMPMVAIT 96 (547)
T ss_pred EEEEECCCccHhHHHHHHHHHhhcCCCEEEEe
Confidence 348888874 47889999999999984
No 198
>PRK07710 acetolactate synthase catalytic subunit; Reviewed
Probab=40.10 E-value=1.4e+02 Score=31.85 Aligned_cols=28 Identities=11% Similarity=0.545 Sum_probs=22.3
Q ss_pred CCCcceeeeccChh------hHHHHHhcCCcEEecC
Q 012217 343 HPSIGGFLTHCGWN------SIVESLCSGVPMICWP 372 (468)
Q Consensus 343 ~~~~~~~v~hgG~~------s~~eal~~GvP~v~~P 372 (468)
.+.+ +++|.|-| .+.+|...++|+|++-
T Consensus 78 ~~gv--~~~t~GPG~~N~~~gl~~A~~~~~Pvl~It 111 (571)
T PRK07710 78 KPGV--VIATSGPGATNVVTGLADAMIDSLPLVVFT 111 (571)
T ss_pred CCeE--EEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 3444 88888855 6789999999999983
No 199
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=39.28 E-value=64 Score=31.25 Aligned_cols=34 Identities=15% Similarity=0.089 Sum_probs=27.8
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
+++|+++-.++.| .-+|..|++.||+|+++.-..
T Consensus 5 ~m~I~IiG~GaiG-----~~lA~~L~~~g~~V~~~~r~~ 38 (313)
T PRK06249 5 TPRIGIIGTGAIG-----GFYGAMLARAGFDVHFLLRSD 38 (313)
T ss_pred CcEEEEECCCHHH-----HHHHHHHHHCCCeEEEEEeCC
Confidence 5699999877777 456788999999999998654
No 200
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=39.22 E-value=46 Score=28.20 Aligned_cols=38 Identities=13% Similarity=0.246 Sum_probs=34.6
Q ss_pred CCcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012217 9 SKVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (468)
Q Consensus 9 ~~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~ 46 (468)
++++|++.+.+.-||=.=.--+++.|++.|.+|.....
T Consensus 11 ~rprvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~ 48 (143)
T COG2185 11 ARPRVLVAKLGLDGHDRGAKVIARALADAGFEVINLGL 48 (143)
T ss_pred CCceEEEeccCccccccchHHHHHHHHhCCceEEecCC
Confidence 48999999999999999999999999999999976643
No 201
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=39.10 E-value=42 Score=34.52 Aligned_cols=21 Identities=19% Similarity=0.270 Sum_probs=18.5
Q ss_pred HHHHHHHHHhCCCEEEEEeCC
Q 012217 27 MLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 27 ~l~La~~L~~rGh~Vt~~t~~ 47 (468)
.-.|+++|+++||+|+++++.
T Consensus 22 ~~~L~~aL~~~G~~V~Vi~p~ 42 (476)
T cd03791 22 VGALPKALAKLGHDVRVIMPK 42 (476)
T ss_pred HHHHHHHHHHCCCeEEEEecC
Confidence 456999999999999999974
No 202
>TIGR00421 ubiX_pad polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases. In E.coli, the protein UbiX (3-octaprenyl-4-hydroxybenzoate carboxy-lyase) has been shown to be involved in the third step of ubiquinone biosynthesis. It catalyzes the reaction [3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2]. The knockout of the homologous protein in yeast confers sensitivity to phenylacrylic acid. Members are not restricted to ubiquinone-synthesizing species. This family represents a distinct clade within the flavoprotein family of Pfam model pfam02441.
Probab=38.46 E-value=42 Score=29.72 Aligned_cols=41 Identities=15% Similarity=0.289 Sum_probs=30.1
Q ss_pred EEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHH
Q 012217 13 AVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLL 54 (468)
Q Consensus 13 il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~ 54 (468)
|++--.++.|-+.- ..|.+.|.++|++|.++.|+.....+.
T Consensus 2 illgvtGsiaa~ka-~~lir~L~~~g~~V~vv~T~~A~~fv~ 42 (181)
T TIGR00421 2 IVVAMTGASGVIYG-IRLLEVLKEAGVEVHLVISDWAKETIK 42 (181)
T ss_pred EEEEEECHHHHHHH-HHHHHHHHHCCCEEEEEECccHHHHHH
Confidence 44444455555544 889999999999999999987766554
No 203
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=38.28 E-value=83 Score=28.69 Aligned_cols=42 Identities=12% Similarity=0.042 Sum_probs=37.1
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchH
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHR 51 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~ 51 (468)
+.+|++.+.++-.|-....-++..|..+|++|+.+-..-..+
T Consensus 88 ~~~vvl~t~~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e 129 (213)
T cd02069 88 KGKIVLATVKGDVHDIGKNLVGVILSNNGYEVIDLGVMVPIE 129 (213)
T ss_pred CCeEEEEeCCCchhHHHHHHHHHHHHhCCCEEEECCCCCCHH
Confidence 679999999999999999999999999999999997654333
No 204
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=37.97 E-value=36 Score=34.03 Aligned_cols=29 Identities=14% Similarity=0.140 Sum_probs=25.1
Q ss_pred CCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 20 FQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 20 ~~GHi~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
..|--.=...||++|+++||+|+++++..
T Consensus 19 ~GG~e~~v~~la~~L~~~G~~V~v~~~~~ 47 (405)
T TIGR03449 19 AGGMNVYILETATELARRGIEVDIFTRAT 47 (405)
T ss_pred CCCceehHHHHHHHHhhCCCEEEEEeccc
Confidence 45677888999999999999999999753
No 205
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=37.32 E-value=27 Score=32.57 Aligned_cols=23 Identities=17% Similarity=0.381 Sum_probs=17.9
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCc
Q 012217 26 AMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 26 P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
-.-.|+++|+++||+|+++++..
T Consensus 21 v~~~L~kaL~~~G~~V~Vi~P~y 43 (245)
T PF08323_consen 21 VVGSLPKALAKQGHDVRVIMPKY 43 (245)
T ss_dssp HHHHHHHHHHHTT-EEEEEEE-T
T ss_pred HHHHHHHHHHhcCCeEEEEEccc
Confidence 35678899999999999998854
No 206
>TIGR02852 spore_dpaB dipicolinic acid synthetase, B subunit. Members of this family represent the B subunit of dipicolinic acid synthetase, an enzyme that synthesizes a small molecule that appears to confer heat stability to bacterial endospores such as those of Bacillus subtilis. The A and B subunits are together in what was originally designated the spoVF locus for stage V of endospore formation.
Probab=37.29 E-value=62 Score=28.86 Aligned_cols=39 Identities=13% Similarity=0.057 Sum_probs=32.0
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcch
Q 012217 12 HAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNH 50 (468)
Q Consensus 12 ~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~ 50 (468)
+|++--.++.|=+.-.+.+.++|.+.|++|+++.++...
T Consensus 2 ~I~lgITGs~~a~~a~~~ll~~L~~~g~~V~vI~S~~A~ 40 (187)
T TIGR02852 2 RIGFGLTGSHCTLEAVMPQLEKLVDEGAEVTPIVSETVQ 40 (187)
T ss_pred EEEEEEecHHHHHHHHHHHHHHHHhCcCEEEEEEchhHH
Confidence 567777777777777779999999999999999887654
No 207
>PRK06276 acetolactate synthase catalytic subunit; Reviewed
Probab=36.91 E-value=1.3e+02 Score=32.25 Aligned_cols=26 Identities=19% Similarity=0.363 Sum_probs=21.3
Q ss_pred ceeeeccC------hhhHHHHHhcCCcEEecC
Q 012217 347 GGFLTHCG------WNSIVESLCSGVPMICWP 372 (468)
Q Consensus 347 ~~~v~hgG------~~s~~eal~~GvP~v~~P 372 (468)
+++++|.| .+.+.+|.+.++|+|++-
T Consensus 65 gv~~~t~GPG~~n~l~~i~~A~~~~~Pvl~I~ 96 (586)
T PRK06276 65 GVCVATSGPGATNLVTGIATAYADSSPVIALT 96 (586)
T ss_pred EEEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 34888887 457889999999999983
No 208
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=36.71 E-value=57 Score=31.64 Aligned_cols=44 Identities=9% Similarity=0.045 Sum_probs=39.0
Q ss_pred cEEEEEcCCCCccHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHH
Q 012217 11 VHAVCIPSPFQSHIKAMLKLAKLLHHK--GFHITFVNTEFNHRRLL 54 (468)
Q Consensus 11 ~~il~~p~p~~GHi~P~l~La~~L~~r--Gh~Vt~~t~~~~~~~~~ 54 (468)
|||+++-..+.|++.=...+.+.|+++ +.+||+++.+.+.+.++
T Consensus 1 m~ILii~~~~iGD~v~~~p~~~~lk~~~P~a~I~~l~~~~~~~l~~ 46 (322)
T PRK10964 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIQFDWVVEEGFAQIPS 46 (322)
T ss_pred CeEEEEeccchHHHHhHHHHHHHHHHhCCCCEEEEEECHHHHHHHh
Confidence 489999999999999999999999997 99999999987766543
No 209
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=35.77 E-value=32 Score=30.97 Aligned_cols=30 Identities=20% Similarity=0.236 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHhCCCEEEEEeCCcchHHH
Q 012217 24 IKAMLKLAKLLHHKGFHITFVNTEFNHRRL 53 (468)
Q Consensus 24 i~P~l~La~~L~~rGh~Vt~~t~~~~~~~~ 53 (468)
--=+..|++.|.+.||+|+++.+..+++..
T Consensus 13 a~Gi~aL~~~L~~~g~~V~VvAP~~~~Sg~ 42 (196)
T PF01975_consen 13 APGIRALAKALSALGHDVVVVAPDSEQSGT 42 (196)
T ss_dssp SHHHHHHHHHHTTTSSEEEEEEESSSTTTS
T ss_pred CHHHHHHHHHHHhcCCeEEEEeCCCCCcCc
Confidence 344678999998888999999998876543
No 210
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=35.53 E-value=25 Score=32.48 Aligned_cols=97 Identities=13% Similarity=0.102 Sum_probs=49.7
Q ss_pred CcEEEEEcCCCCcc----HHHHHHHHHHHHhCCCEEEEEeCCcc--hHHHHhhhcCCCCCCCCCee--EEeCCCCCCCCC
Q 012217 10 KVHAVCIPSPFQSH----IKAMLKLAKLLHHKGFHITFVNTEFN--HRRLLKARGQHSLDGLPSFR--FEAIPDGLPASS 81 (468)
Q Consensus 10 ~~~il~~p~p~~GH----i~P~l~La~~L~~rGh~Vt~~t~~~~--~~~~~~~~~~~~~~~~~gi~--f~~l~~~~~~~~ 81 (468)
+..|++.|..+.-. ..-+.+|++.|.++|..|.++.++.. .+....... +.+ +..+..... .
T Consensus 105 ~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~-l- 174 (247)
T PF01075_consen 105 KPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQEKEIADQIAA--------GLQNPVINLAGKTS-L- 174 (247)
T ss_dssp SSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHHHHHHHHHHT--------THTTTTEEETTTS--H-
T ss_pred CCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHHHHHHHHHHH--------hcccceEeecCCCC-H-
Confidence 56788887665422 23369999999999988888877766 222222210 111 222211100 0
Q ss_pred CCCCCcCCCCCCCcccc---hHHHHHHHcCCCeEEEcccc
Q 012217 82 DESPTAQDAYSLDGFLP---FTITAAQQLGLPIVLFFTIS 118 (468)
Q Consensus 82 ~~~~~~~~~~~~D~~~~---~~~~vA~~lgIP~v~~~~~~ 118 (468)
.+...-+..+|+++. ....+|..+|+|.+.++...
T Consensus 175 --~e~~ali~~a~~~I~~Dtg~~HlA~a~~~p~v~lfg~t 212 (247)
T PF01075_consen 175 --RELAALISRADLVIGNDTGPMHLAAALGTPTVALFGPT 212 (247)
T ss_dssp --HHHHHHHHTSSEEEEESSHHHHHHHHTT--EEEEESSS
T ss_pred --HHHHHHHhcCCEEEecCChHHHHHHHHhCCEEEEecCC
Confidence 011111112777664 77889999999999997544
No 211
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=35.30 E-value=2.2e+02 Score=25.55 Aligned_cols=104 Identities=14% Similarity=0.090 Sum_probs=68.4
Q ss_pred HHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHHHhcC
Q 012217 286 QLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSG 365 (468)
Q Consensus 286 ~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~G 365 (468)
.-.++++.|.+.+..++...+.. ..+.+.|.++.+.+++ ==||+. .=.++|..+..+|+.+|
T Consensus 67 ~d~~l~~~l~~~~~dlvvLAGyM------rIL~~~fl~~~~grIl----------NIHPSL--LP~f~G~h~~~~A~~aG 128 (200)
T COG0299 67 FDRALVEALDEYGPDLVVLAGYM------RILGPEFLSRFEGRIL----------NIHPSL--LPAFPGLHAHEQALEAG 128 (200)
T ss_pred HHHHHHHHHHhcCCCEEEEcchH------HHcCHHHHHHhhcceE----------ecCccc--ccCCCCchHHHHHHHcC
Confidence 34558889999999888777654 3466677666654322 237887 78889999999999999
Q ss_pred CcEEecCCCC--CcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHH
Q 012217 366 VPMICWPFTG--DQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREM 413 (468)
Q Consensus 366 vP~v~~P~~~--DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~ 413 (468)
+..-++-.++ +.-+-+-.+ .+ ..+.+. ..-|.|.|++.|.+.
T Consensus 129 ~k~sG~TVH~V~e~vD~GpII-~Q--~~Vpv~---~~Dt~etl~~RV~~~ 172 (200)
T COG0299 129 VKVSGCTVHFVTEGVDTGPII-AQ--AAVPVL---PGDTAETLEARVLEQ 172 (200)
T ss_pred CCccCcEEEEEccCCCCCCeE-EE--Eeeeec---CCCCHHHHHHHHHHH
Confidence 9986665532 333333333 22 133343 234889999888764
No 212
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=35.28 E-value=77 Score=30.62 Aligned_cols=29 Identities=17% Similarity=0.145 Sum_probs=24.7
Q ss_pred CCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 20 FQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 20 ~~GHi~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
..|--.-...||+.|+++||+|+++++..
T Consensus 9 ~gG~e~~~~~l~~~L~~~g~~v~v~~~~~ 37 (355)
T cd03819 9 SGGVERGTLELARALVERGHRSLVASAGG 37 (355)
T ss_pred cCcHHHHHHHHHHHHHHcCCEEEEEcCCC
Confidence 46667778899999999999999998754
No 213
>PLN02929 NADH kinase
Probab=34.80 E-value=2e+02 Score=27.81 Aligned_cols=98 Identities=9% Similarity=0.169 Sum_probs=60.1
Q ss_pred CHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHHH
Q 012217 283 NKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESL 362 (468)
Q Consensus 283 ~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal 362 (468)
.++.+..+.+-|++.|..+.-+.+.+ + ...+..+++ +|+-||-||+..+.
T Consensus 32 h~~~~~~~~~~L~~~gi~~~~v~r~~--------~--------------------~~~~~~~Dl--vi~lGGDGT~L~aa 81 (301)
T PLN02929 32 HKDTVNFCKDILQQKSVDWECVLRNE--------L--------------------SQPIRDVDL--VVAVGGDGTLLQAS 81 (301)
T ss_pred hHHHHHHHHHHHHHcCCEEEEeeccc--------c--------------------ccccCCCCE--EEEECCcHHHHHHH
Confidence 45667778888888787663222211 0 011223455 99999999999985
Q ss_pred h---cCCcEEecCCCC------CcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCc
Q 012217 363 C---SGVPMICWPFTG------DQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGE 417 (468)
Q Consensus 363 ~---~GvP~v~~P~~~------DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~ 417 (468)
. .++|++++-..- .+++|.-. +...+|.-- .++.+++.++|.+++++.
T Consensus 82 ~~~~~~iPvlGIN~Gp~~~~~~~~~~~~~~--~~r~lGfL~-----~~~~~~~~~~L~~il~g~ 138 (301)
T PLN02929 82 HFLDDSIPVLGVNSDPTQKDEVEEYSDEFD--ARRSTGHLC-----AATAEDFEQVLDDVLFGR 138 (301)
T ss_pred HHcCCCCcEEEEECCCcccccccccccccc--cccCccccc-----cCCHHHHHHHHHHHHcCC
Confidence 4 478998876642 12333321 111244322 467899999999999764
No 214
>TIGR03837 efp_adjacent_2 conserved hypothetical protein, PP_1857 family. This model describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=34.79 E-value=2.7e+02 Score=27.70 Aligned_cols=58 Identities=12% Similarity=0.159 Sum_probs=37.8
Q ss_pred CCccHHHHHHHHHHHHh-CCCEEEEEeCCc-chHHHHhhhcCCC-CCCCCCeeEEeCCCCC
Q 012217 20 FQSHIKAMLKLAKLLHH-KGFHITFVNTEF-NHRRLLKARGQHS-LDGLPSFRFEAIPDGL 77 (468)
Q Consensus 20 ~~GHi~P~l~La~~L~~-rGh~Vt~~t~~~-~~~~~~~~~~~~~-~~~~~gi~f~~l~~~~ 77 (468)
=.|+|--.-+|||.|++ +|++|++.+..- ...++.....+.. .....||.+...+..+
T Consensus 10 NyGDIGV~WRLArqLa~e~g~~VrLwvDdl~af~~i~P~~d~~~~~q~~~gV~I~~W~~~~ 70 (371)
T TIGR03837 10 NYGDIGVCWRLARQLAAEHGHQVRLWVDDLSAFARLCPEVDPDAGVQLVAGVEIRHWRAPF 70 (371)
T ss_pred CCcchHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCCCCcchhhcccCCeEEEECCCcc
Confidence 36899999999999997 799999998752 2233433222111 1123478888776443
No 215
>PRK08155 acetolactate synthase catalytic subunit; Validated
Probab=34.68 E-value=2.3e+02 Score=30.09 Aligned_cols=26 Identities=15% Similarity=0.428 Sum_probs=21.0
Q ss_pred ceeeeccCh------hhHHHHHhcCCcEEecC
Q 012217 347 GGFLTHCGW------NSIVESLCSGVPMICWP 372 (468)
Q Consensus 347 ~~~v~hgG~------~s~~eal~~GvP~v~~P 372 (468)
+++++|.|- +.++||...++|+|++-
T Consensus 78 gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i~ 109 (564)
T PRK08155 78 AVCMACSGPGATNLVTAIADARLDSIPLVCIT 109 (564)
T ss_pred eEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 338888774 47889999999999984
No 216
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=34.09 E-value=94 Score=26.19 Aligned_cols=38 Identities=16% Similarity=0.160 Sum_probs=30.2
Q ss_pred CCceEEEeecCCcCCCHHHHHHHHHHHHcCCCCEEEEEc
Q 012217 268 PKSVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIR 306 (468)
Q Consensus 268 ~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~ 306 (468)
...+|+|++||-.....+.++++++.+. .+.+++++..
T Consensus 50 ~~d~vvi~lGtNd~~~~~nl~~ii~~~~-~~~~ivlv~~ 87 (150)
T cd01840 50 LRKTVVIGLGTNGPFTKDQLDELLDALG-PDRQVYLVNP 87 (150)
T ss_pred CCCeEEEEecCCCCCCHHHHHHHHHHcC-CCCEEEEEEC
Confidence 3469999999998777888999999885 3677777654
No 217
>PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B ....
Probab=34.04 E-value=62 Score=31.33 Aligned_cols=40 Identities=18% Similarity=0.130 Sum_probs=32.9
Q ss_pred EEEEEcC-CCCccHHHHHHHHHHHHhCCCEEEEEeCCcchH
Q 012217 12 HAVCIPS-PFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHR 51 (468)
Q Consensus 12 ~il~~p~-p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~ 51 (468)
++++|.- ++.|-..--.++|..++++|++|-++++...+.
T Consensus 2 r~~~~~GKGGVGKTT~aaA~A~~~A~~G~rtLlvS~Dpa~~ 42 (305)
T PF02374_consen 2 RILFFGGKGGVGKTTVAAALALALARRGKRTLLVSTDPAHS 42 (305)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEESSTTTH
T ss_pred eEEEEecCCCCCcHHHHHHHHHHHhhCCCCeeEeecCCCcc
Confidence 5566655 799999999999999999999999999976554
No 218
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=33.90 E-value=60 Score=31.99 Aligned_cols=46 Identities=11% Similarity=0.015 Sum_probs=40.6
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHh
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHK--GFHITFVNTEFNHRRLLK 55 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~r--Gh~Vt~~t~~~~~~~~~~ 55 (468)
.++|+++-..+.|++.=...+.+.|+++ +.+|++++.+.+.+.++.
T Consensus 5 ~~~ILii~~~~iGD~vl~~P~l~~Lk~~~P~a~I~~l~~~~~~~l~~~ 52 (352)
T PRK10422 5 FRRILIIKMRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQDTIPILSE 52 (352)
T ss_pred CceEEEEEecccCceeeHHHHHHHHHHHCCCCeEEEEeccChHHHhcc
Confidence 4589999999999999999999999997 899999999887765543
No 219
>PRK06029 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Provisional
Probab=33.88 E-value=73 Score=28.35 Aligned_cols=43 Identities=12% Similarity=0.067 Sum_probs=34.6
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHh-CCCEEEEEeCCcchHHHHh
Q 012217 12 HAVCIPSPFQSHIKAMLKLAKLLHH-KGFHITFVNTEFNHRRLLK 55 (468)
Q Consensus 12 ~il~~p~p~~GHi~P~l~La~~L~~-rGh~Vt~~t~~~~~~~~~~ 55 (468)
+|++--.++.| ..=...|.++|.+ .||+|.++.++.....+..
T Consensus 3 ~IllgVTGsia-a~ka~~l~~~L~k~~g~~V~vv~T~~A~~fv~~ 46 (185)
T PRK06029 3 RLIVGISGASG-AIYGVRLLQVLRDVGEIETHLVISQAARQTLAH 46 (185)
T ss_pred EEEEEEECHHH-HHHHHHHHHHHHhhcCCeEEEEECHHHHHHHHH
Confidence 67777777777 6669999999999 5999999999877665554
No 220
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=33.73 E-value=39 Score=30.07 Aligned_cols=27 Identities=11% Similarity=0.126 Sum_probs=20.5
Q ss_pred CCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012217 19 PFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 19 p~~GHi~P~l~La~~L~~rGh~Vt~~t~~ 47 (468)
++.|++- -.|+++..+|||+||-++-.
T Consensus 7 gAsG~~G--s~i~~EA~~RGHeVTAivRn 33 (211)
T COG2910 7 GASGKAG--SRILKEALKRGHEVTAIVRN 33 (211)
T ss_pred ecCchhH--HHHHHHHHhCCCeeEEEEeC
Confidence 4555554 36789999999999999763
No 221
>PRK06371 translation initiation factor IF-2B subunit alpha; Provisional
Probab=33.70 E-value=76 Score=31.07 Aligned_cols=19 Identities=16% Similarity=0.060 Sum_probs=14.7
Q ss_pred hHHHHHHHcCCCeEEEccc
Q 012217 99 FTITAAQQLGLPIVLFFTI 117 (468)
Q Consensus 99 ~~~~vA~~lgIP~v~~~~~ 117 (468)
....+|+.+|||+++..+.
T Consensus 240 ~lAl~Ak~~~VPfyV~a~~ 258 (329)
T PRK06371 240 EKAVLAKVNGIPFYVAAPG 258 (329)
T ss_pred HHHHHHHHcCCCEEEeccc
Confidence 3456789999999998653
No 222
>PRK14099 glycogen synthase; Provisional
Probab=33.49 E-value=73 Score=33.14 Aligned_cols=38 Identities=11% Similarity=0.092 Sum_probs=27.9
Q ss_pred CcEEEEEcC-----C-CCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012217 10 KVHAVCIPS-----P-FQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 10 ~~~il~~p~-----p-~~GHi~P~l~La~~L~~rGh~Vt~~t~~ 47 (468)
+|+|++++. - ..|=-.-.-.|.++|+++||+|.+++|.
T Consensus 3 ~~~il~v~~E~~p~~k~ggl~dv~~~lp~~l~~~g~~v~v~~P~ 46 (485)
T PRK14099 3 PLRVLSVASEIFPLIKTGGLADVAGALPAALKAHGVEVRTLVPG 46 (485)
T ss_pred CcEEEEEEeccccccCCCcHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 578888763 1 2333344567888899999999999884
No 223
>PRK05920 aromatic acid decarboxylase; Validated
Probab=33.39 E-value=76 Score=28.75 Aligned_cols=45 Identities=11% Similarity=0.066 Sum_probs=34.6
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHh
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLK 55 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~ 55 (468)
..+|++--.++.+= .=.+.+.+.|.+.|++|+++.++.....+..
T Consensus 3 ~krIllgITGsiaa-~ka~~lvr~L~~~g~~V~vi~T~~A~~fv~~ 47 (204)
T PRK05920 3 MKRIVLAITGASGA-IYGVRLLECLLAADYEVHLVISKAAQKVLAT 47 (204)
T ss_pred CCEEEEEEeCHHHH-HHHHHHHHHHHHCCCEEEEEEChhHHHHHHH
Confidence 34777766665554 6889999999999999999999876665543
No 224
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=33.21 E-value=1.7e+02 Score=28.22 Aligned_cols=92 Identities=15% Similarity=0.089 Sum_probs=51.1
Q ss_pred hhhhccccCCCCceEEEeecCCcCCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccCh
Q 012217 258 ECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQ 337 (468)
Q Consensus 258 ~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~ 337 (468)
++..+..+..-+++-.-........+...+..+.++.++.|.++++-++..... .+. ......++.=.
T Consensus 117 E~er~v~~~gf~g~~l~p~~~~~~~~~~~~~pi~~~a~~~gvpv~ihtG~~~~~-------~~~-----~~~~~~p~~~~ 184 (293)
T COG2159 117 ELERRVRELGFVGVKLHPVAQGFYPDDPRLYPIYEAAEELGVPVVIHTGAGPGG-------AGL-----EKGHSDPLYLD 184 (293)
T ss_pred HHHHHHHhcCceEEEecccccCCCCCChHHHHHHHHHHHcCCCEEEEeCCCCCC-------ccc-----ccCCCCchHHH
Confidence 555555543322333333333344455668999999999999999977754210 000 00001111112
Q ss_pred HHhhcCCCcceeeeccC--hhhHHHH
Q 012217 338 EEVLKHPSIGGFLTHCG--WNSIVES 361 (468)
Q Consensus 338 ~~il~~~~~~~~v~hgG--~~s~~ea 361 (468)
.-.-.+|+++.++.|+| +.=..|+
T Consensus 185 ~va~~fP~l~IVl~H~G~~~p~~~~a 210 (293)
T COG2159 185 DVARKFPELKIVLGHMGEDYPWELEA 210 (293)
T ss_pred HHHHHCCCCcEEEEecCCCCchhHHH
Confidence 33456789999999999 4444444
No 225
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) and related protiens subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. A polar interaction between the conserved glutamate of the PYR domain and the N1' of the TPP aminopyrimidine ring is shared by most TPP-dependent enzymes, and participates in the activation of TPP. For glyoxylate carboligase, which belongs to this subfamily, but lacks this conserved glutamate, the rate of the initial TPP activation step is reduced but the ensuing steps of the enzymic reaction proceed efficiently. The PYR and PP domains have a common fold, but do not share strong sequence conservatio
Probab=33.15 E-value=2.9e+02 Score=23.15 Aligned_cols=28 Identities=14% Similarity=0.373 Sum_probs=21.6
Q ss_pred CCcceeeeccCh------hhHHHHHhcCCcEEecCC
Q 012217 344 PSIGGFLTHCGW------NSIVESLCSGVPMICWPF 373 (468)
Q Consensus 344 ~~~~~~v~hgG~------~s~~eal~~GvP~v~~P~ 373 (468)
+.+ +++|+|- +.+.+|...++|+|++.-
T Consensus 60 ~~v--~~~~~gpG~~n~~~~l~~A~~~~~Pll~i~~ 93 (155)
T cd07035 60 PGV--VLVTSGPGLTNAVTGLANAYLDSIPLLVITG 93 (155)
T ss_pred CEE--EEEcCCCcHHHHHHHHHHHHhhCCCEEEEeC
Confidence 444 8888663 477789999999999954
No 226
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=32.75 E-value=72 Score=26.79 Aligned_cols=28 Identities=18% Similarity=0.199 Sum_probs=21.3
Q ss_pred HHHHHHHhCCCEEEEEeCCcchHHHHhh
Q 012217 29 KLAKLLHHKGFHITFVNTEFNHRRLLKA 56 (468)
Q Consensus 29 ~La~~L~~rGh~Vt~~t~~~~~~~~~~~ 56 (468)
-+|..|++.||+|++++.....+.+.+.
T Consensus 12 ~~a~~L~~~g~~V~l~~r~~~~~~~~~~ 39 (151)
T PF02558_consen 12 LYAARLAQAGHDVTLVSRSPRLEAIKEQ 39 (151)
T ss_dssp HHHHHHHHTTCEEEEEESHHHHHHHHHH
T ss_pred HHHHHHHHCCCceEEEEccccHHhhhhe
Confidence 4688999999999999987734445444
No 227
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=32.46 E-value=1.3e+02 Score=28.75 Aligned_cols=18 Identities=17% Similarity=0.253 Sum_probs=14.0
Q ss_pred hHHHHHHHcCCCeEEEcc
Q 012217 99 FTITAAQQLGLPIVLFFT 116 (468)
Q Consensus 99 ~~~~vA~~lgIP~v~~~~ 116 (468)
....+|+.+|+|+++..+
T Consensus 202 ~lA~~Ak~~~vPfyV~a~ 219 (275)
T PRK08335 202 LLALACHDNGVPFYVAAE 219 (275)
T ss_pred HHHHHHHHcCCCEEEECc
Confidence 345678999999999754
No 228
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=32.17 E-value=56 Score=30.17 Aligned_cols=31 Identities=19% Similarity=0.237 Sum_probs=21.7
Q ss_pred EEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012217 15 CIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 15 ~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~ 47 (468)
+++-.+.|-+ -.+||+.|.++||+|+++...
T Consensus 19 ~itN~SSG~i--G~aLA~~L~~~G~~V~li~r~ 49 (229)
T PRK06732 19 GITNHSTGQL--GKIIAETFLAAGHEVTLVTTK 49 (229)
T ss_pred eecCccchHH--HHHHHHHHHhCCCEEEEEECc
Confidence 3444444433 267889999999999999753
No 229
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=32.16 E-value=48 Score=32.14 Aligned_cols=31 Identities=10% Similarity=0.066 Sum_probs=27.2
Q ss_pred CCCccHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012217 19 PFQSHIKAMLKLAKLLHHKGFHITFVNTEFN 49 (468)
Q Consensus 19 p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~ 49 (468)
...|.-.-...+++.|.++||+|++++....
T Consensus 10 ~~GG~~~~~~~l~~~L~~~~~~v~~i~~~~~ 40 (358)
T cd03812 10 NRGGIETFIMNYYRNLDRSKIQFDFLVTSKE 40 (358)
T ss_pred CCccHHHHHHHHHHhcCccceEEEEEEeCCC
Confidence 5788888899999999999999999997643
No 230
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=31.95 E-value=36 Score=29.24 Aligned_cols=31 Identities=23% Similarity=0.221 Sum_probs=24.4
Q ss_pred EEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 13 AVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 13 il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
|.++-.+..|+ .+|..|+++||+|++.+...
T Consensus 2 I~ViGaG~~G~-----AlA~~la~~g~~V~l~~~~~ 32 (157)
T PF01210_consen 2 IAVIGAGNWGT-----ALAALLADNGHEVTLWGRDE 32 (157)
T ss_dssp EEEESSSHHHH-----HHHHHHHHCTEEEEEETSCH
T ss_pred EEEECcCHHHH-----HHHHHHHHcCCEEEEEeccH
Confidence 45555555554 78999999999999998864
No 231
>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed
Probab=31.89 E-value=3.2e+02 Score=28.87 Aligned_cols=28 Identities=14% Similarity=0.380 Sum_probs=22.7
Q ss_pred CCCcceeeeccCh------hhHHHHHhcCCcEEecC
Q 012217 343 HPSIGGFLTHCGW------NSIVESLCSGVPMICWP 372 (468)
Q Consensus 343 ~~~~~~~v~hgG~------~s~~eal~~GvP~v~~P 372 (468)
.+.+ +++|.|- +.++||...++|+|++-
T Consensus 63 ~~gv--~~~t~GpG~~n~~~~l~~A~~~~~Pvl~i~ 96 (548)
T PRK08978 63 KVGV--CIATSGPGATNLITGLADALLDSVPVVAIT 96 (548)
T ss_pred CCEE--EEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 4555 8888884 47889999999999993
No 232
>PLN02316 synthase/transferase
Probab=31.31 E-value=85 Score=35.82 Aligned_cols=39 Identities=13% Similarity=0.286 Sum_probs=28.7
Q ss_pred CcEEEEEcC---C---CCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 10 KVHAVCIPS---P---FQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 10 ~~~il~~p~---p---~~GHi~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
.|||+++++ | ..|=-.-.-.|+++|+++||+|.++++..
T Consensus 587 pM~Il~VSsE~~P~aKvGGLgDVV~sLp~ALa~~Gh~V~VitP~Y 631 (1036)
T PLN02316 587 PMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLNHNVDIILPKY 631 (1036)
T ss_pred CcEEEEEEcccCCCCCcCcHHHHHHHHHHHHHHcCCEEEEEecCC
Confidence 589998873 2 12222334789999999999999999854
No 233
>cd02065 B12-binding_like B12 binding domain (B12-BD). Most of the members bind different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide. This domain is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins. Not all members of this family contain the conserved binding motif.
Probab=31.17 E-value=1.2e+02 Score=24.38 Aligned_cols=40 Identities=13% Similarity=0.070 Sum_probs=33.2
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchH
Q 012217 12 HAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHR 51 (468)
Q Consensus 12 ~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~ 51 (468)
+++....++..|-.....++..|.+.|++|..+......+
T Consensus 1 ~~l~~~~~~~~h~lg~~~~~~~l~~~G~~v~~l~~~~~~~ 40 (125)
T cd02065 1 KVLGATVGGDVHDIGKNIVAIALRDNGFEVIDLGVDVPPE 40 (125)
T ss_pred CEEEEEcCCchhhHHHHHHHHHHHHCCCEEEEcCCCCCHH
Confidence 3577788999999999999999999999999986543333
No 234
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=30.85 E-value=1.3e+02 Score=29.70 Aligned_cols=96 Identities=10% Similarity=0.184 Sum_probs=54.5
Q ss_pred ceEEEeecCCcCCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCch-hHHH-HhhcCce---------------Ee
Q 012217 270 SVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPA-EFEV-KAKEKGF---------------VA 332 (468)
Q Consensus 270 ~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~-~~~~-~~~~~~~---------------v~ 332 (468)
.+++.+.||-....+. ..+++.|++.|..++|+......+ .+.+|. ++.- .++...+ +.
T Consensus 3 ~i~~~~GGTGGHi~Pa--la~a~~l~~~g~~v~~vg~~~~~e--~~l~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 78 (352)
T PRK12446 3 KIVFTGGGSAGHVTPN--LAIIPYLKEDNWDISYIGSHQGIE--KTIIEKENIPYYSISSGKLRRYFDLKNIKDPFLVMK 78 (352)
T ss_pred eEEEEcCCcHHHHHHH--HHHHHHHHhCCCEEEEEECCCccc--cccCcccCCcEEEEeccCcCCCchHHHHHHHHHHHH
Confidence 3788888887765553 346666777789999987543211 111221 1100 0000000 00
Q ss_pred cccChHHhhc--CCCcceeeeccChhh---HHHHHhcCCcEEec
Q 012217 333 SWCPQEEVLK--HPSIGGFLTHCGWNS---IVESLCSGVPMICW 371 (468)
Q Consensus 333 ~~~p~~~il~--~~~~~~~v~hgG~~s---~~eal~~GvP~v~~ 371 (468)
.+.--..++. .|++ +|++||+-| +..|...|+|+++.
T Consensus 79 ~~~~~~~i~~~~kPdv--vi~~Ggy~s~p~~~aa~~~~~p~~i~ 120 (352)
T PRK12446 79 GVMDAYVRIRKLKPDV--IFSKGGFVSVPVVIGGWLNRVPVLLH 120 (352)
T ss_pred HHHHHHHHHHhcCCCE--EEecCchhhHHHHHHHHHcCCCEEEE
Confidence 1111112343 4676 999999986 89999999999874
No 235
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=30.78 E-value=1.9e+02 Score=23.90 Aligned_cols=44 Identities=16% Similarity=0.154 Sum_probs=27.0
Q ss_pred CCCCCCCCCCcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012217 1 MESKPKACSKVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFN 49 (468)
Q Consensus 1 m~~~~~~~~~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~ 49 (468)
|+.......+++|.++-.+=.| ..|++.|.+.||+|+-+.....
T Consensus 1 ~~~~~~~~~~l~I~iIGaGrVG-----~~La~aL~~ag~~v~~v~srs~ 44 (127)
T PF10727_consen 1 MNTPATQAARLKIGIIGAGRVG-----TALARALARAGHEVVGVYSRSP 44 (127)
T ss_dssp -----------EEEEECTSCCC-----CHHHHHHHHTTSEEEEESSCHH
T ss_pred CCccccCCCccEEEEECCCHHH-----HHHHHHHHHCCCeEEEEEeCCc
Confidence 4444333347899999887666 4689999999999988876543
No 236
>TIGR02699 archaeo_AfpA archaeoflavoprotein AfpA. The prototypical member of this archaeal protein family is AF1518 from Archaeoglobus fulgidus. This homodimer with two non-covalently bound FMN cofactors can receive electrons from ferredoxin, but not from a number of other electron donors such as NADH or rubredoxin. It can then donate electrons to various reductases.
Probab=30.76 E-value=89 Score=27.52 Aligned_cols=33 Identities=9% Similarity=0.059 Sum_probs=26.2
Q ss_pred CccHHH-HHHHHHHHHh-CCCEEEEEeCCcchHHH
Q 012217 21 QSHIKA-MLKLAKLLHH-KGFHITFVNTEFNHRRL 53 (468)
Q Consensus 21 ~GHi~P-~l~La~~L~~-rGh~Vt~~t~~~~~~~~ 53 (468)
.||... ...+.+.|++ +||+|.++.++...+.+
T Consensus 9 sg~~l~e~v~~l~~L~~~~g~eV~vv~S~~A~~vi 43 (174)
T TIGR02699 9 SGDKLPETYSIMKDVKNRYGDEIDVFLSKAGEQVV 43 (174)
T ss_pred cHHHHHHHHHHHHHHHHhcCCEEEEEECHhHHHHH
Confidence 378866 8899999985 59999999997766433
No 237
>PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia.
Probab=30.69 E-value=1.9e+02 Score=28.57 Aligned_cols=99 Identities=14% Similarity=0.166 Sum_probs=64.2
Q ss_pred EecccChHH-hhcCCCcceeeecc---Chh-hHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhH
Q 012217 331 VASWCPQEE-VLKHPSIGGFLTHC---GWN-SIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNE 405 (468)
Q Consensus 331 v~~~~p~~~-il~~~~~~~~v~hg---G~~-s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~ 405 (468)
+.+-.+--+ +-.|.++ +|+|= |.| --.|+++.|-|+|- |+..+ . ++|..-. .++..+
T Consensus 257 fegR~~~p~fla~~tD~--VvSHqWeN~lNYlY~daLyggYPLVH---------NS~~l-~--d~GYYY~----~fD~~~ 318 (364)
T PF10933_consen 257 FEGRFDFPDFLAQHTDA--VVSHQWENPLNYLYYDALYGGYPLVH---------NSPLL-K--DVGYYYP----DFDAFE 318 (364)
T ss_pred EeeecChHHHHHhCCCE--EEeccccchhhHHHHHHHhcCCCccc---------Ccchh-c--ccCcCCC----CccHHH
Confidence 344444433 3447777 99993 444 34699999999984 78777 4 4787765 566666
Q ss_pred HHHHHHHHhc--CchHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHH
Q 012217 406 VEKLVREMME--GEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNE 453 (468)
Q Consensus 406 l~~av~~~l~--~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~~~ 453 (468)
=++++.+++. |.+.+.|+++|+++=..+.- ....+++...+.
T Consensus 319 G~r~L~~A~~~HD~~~~~Y~~ra~~~l~~~~p------~n~~nv~~y~~~ 362 (364)
T PF10933_consen 319 GARQLLRAIREHDADLDAYRARARRLLDRLSP------ENPANVRAYEAR 362 (364)
T ss_pred HHHHHHHHHHHccccHHHHHHHHHHHHHhhCC------CCHHHHHHHHHh
Confidence 6666666664 45567999999988776442 334555554443
No 238
>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type. Several isozymes of this enzyme are found in E. coli K12, one of which contains a frameshift in the large subunit gene and is not expressed.
Probab=30.65 E-value=3.3e+02 Score=28.82 Aligned_cols=26 Identities=23% Similarity=0.470 Sum_probs=21.4
Q ss_pred ceeeeccCh------hhHHHHHhcCCcEEecC
Q 012217 347 GGFLTHCGW------NSIVESLCSGVPMICWP 372 (468)
Q Consensus 347 ~~~v~hgG~------~s~~eal~~GvP~v~~P 372 (468)
+++++|.|- +.++||...++|+|++-
T Consensus 66 gv~~~t~GpG~~n~l~~i~~A~~~~~Pvl~i~ 97 (558)
T TIGR00118 66 GVVLVTSGPGATNLVTGIATAYMDSIPMVVFT 97 (558)
T ss_pred EEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 348888874 57889999999999993
No 239
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated
Probab=30.38 E-value=2.6e+02 Score=29.90 Aligned_cols=26 Identities=12% Similarity=0.241 Sum_probs=21.4
Q ss_pred ceeeeccCh------hhHHHHHhcCCcEEecC
Q 012217 347 GGFLTHCGW------NSIVESLCSGVPMICWP 372 (468)
Q Consensus 347 ~~~v~hgG~------~s~~eal~~GvP~v~~P 372 (468)
+++++|.|- +.+++|...++|+|++-
T Consensus 70 gv~~~t~GPG~~n~~~gi~~A~~~~~Pvl~I~ 101 (588)
T PRK07525 70 GMVIGQNGPGITNFVTAVATAYWAHTPVVLVT 101 (588)
T ss_pred EEEEEcCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 448898884 47789999999999995
No 240
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=30.31 E-value=3.5e+02 Score=23.16 Aligned_cols=139 Identities=16% Similarity=0.133 Sum_probs=69.0
Q ss_pred eEEEeecCCcCCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceee
Q 012217 271 VIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFL 350 (468)
Q Consensus 271 vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v 350 (468)
.|-|-+||... ....+++...|++.|..+-..+-+- ...|+.+.+-.. -+.+-..+.||
T Consensus 2 ~V~Ii~gs~SD--~~~~~~a~~~L~~~gi~~~~~V~sa------HR~p~~l~~~~~-------------~~~~~~~~viI 60 (150)
T PF00731_consen 2 KVAIIMGSTSD--LPIAEEAAKTLEEFGIPYEVRVASA------HRTPERLLEFVK-------------EYEARGADVII 60 (150)
T ss_dssp EEEEEESSGGG--HHHHHHHHHHHHHTT-EEEEEE--T------TTSHHHHHHHHH-------------HTTTTTESEEE
T ss_pred eEEEEeCCHHH--HHHHHHHHHHHHHcCCCEEEEEEec------cCCHHHHHHHHH-------------HhccCCCEEEE
Confidence 45666677653 5567778888888886665444332 223433322111 11111223388
Q ss_pred eccChh----hHHHHHhcCCcEEecCCCCCcccch----hhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCchHHHH
Q 012217 351 THCGWN----SIVESLCSGVPMICWPFTGDQPTNG----RYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQM 422 (468)
Q Consensus 351 ~hgG~~----s~~eal~~GvP~v~~P~~~DQ~~na----~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~ 422 (468)
.=.|.. ++..++. -.|+|.+|....+.... ..+.-=-|+++..-.-++..++..++-.|-.+ .|+ ++
T Consensus 61 a~AG~~a~Lpgvva~~t-~~PVIgvP~~~~~~~g~d~l~S~vqMp~g~pvatv~i~~~~nAA~~A~~ILa~-~d~---~l 135 (150)
T PF00731_consen 61 AVAGMSAALPGVVASLT-TLPVIGVPVSSGYLGGLDSLLSIVQMPSGVPVATVGINNGFNAALLAARILAL-KDP---EL 135 (150)
T ss_dssp EEEESS--HHHHHHHHS-SS-EEEEEE-STTTTTHHHHHHHHT--TTS--EE-SSTHHHHHHHHHHHHHHT-T-H---HH
T ss_pred EECCCcccchhhheecc-CCCEEEeecCcccccCcccHHHHHhccCCCCceEEEccCchHHHHHHHHHHhc-CCH---HH
Confidence 877753 4444444 79999999987754322 22211225554432111233444444433322 466 78
Q ss_pred HHHHHHHHHHHHH
Q 012217 423 RNKAMEWKGLAEE 435 (468)
Q Consensus 423 ~~~a~~l~~~~~~ 435 (468)
+++.+..+++.++
T Consensus 136 ~~kl~~~~~~~~~ 148 (150)
T PF00731_consen 136 REKLRAYREKMKE 148 (150)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc
Confidence 8888888887765
No 241
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=30.22 E-value=71 Score=30.86 Aligned_cols=44 Identities=9% Similarity=0.004 Sum_probs=39.0
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHh
Q 012217 12 HAVCIPSPFQSHIKAMLKLAKLLHHK--GFHITFVNTEFNHRRLLK 55 (468)
Q Consensus 12 ~il~~p~p~~GHi~P~l~La~~L~~r--Gh~Vt~~t~~~~~~~~~~ 55 (468)
+|+++-....|++.=...+.+.|+++ +.+||+++.+.+.+.++.
T Consensus 1 ~ILiir~~~iGD~vl~~p~l~~Lr~~~P~a~I~~l~~~~~~~~~~~ 46 (319)
T TIGR02193 1 RILIVKTSSLGDVIHTLPALTDIKRALPDVEIDWVVEEGFADIVRL 46 (319)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHHhCCCCEEEEEEChhHhhhhhc
Confidence 58899999999999999999999997 999999999887665553
No 242
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=30.03 E-value=90 Score=20.50 Aligned_cols=26 Identities=15% Similarity=0.437 Sum_probs=17.9
Q ss_pred chhHHHHHHHHHhcCchHHHHHHHHHHH
Q 012217 402 IRNEVEKLVREMMEGEKGKQMRNKAMEW 429 (468)
Q Consensus 402 ~~~~l~~av~~~l~~~~~~~~~~~a~~l 429 (468)
+++++.+||..+.++. -++++.|++.
T Consensus 1 tee~l~~Ai~~v~~g~--~S~r~AA~~y 26 (45)
T PF05225_consen 1 TEEDLQKAIEAVKNGK--MSIRKAAKKY 26 (45)
T ss_dssp -HHHHHHHHHHHHTTS--S-HHHHHHHH
T ss_pred CHHHHHHHHHHHHhCC--CCHHHHHHHH
Confidence 4789999999998662 1677766654
No 243
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=30.01 E-value=2.7e+02 Score=29.05 Aligned_cols=111 Identities=14% Similarity=0.118 Sum_probs=70.4
Q ss_pred eEecccChHH---hhcCCCcceeee--ccChhhHH-HHHhcCC----cEEecCCCCCcccchhhheeeceeEEEEeCCCC
Q 012217 330 FVASWCPQEE---VLKHPSIGGFLT--HCGWNSIV-ESLCSGV----PMICWPFTGDQPTNGRYVCNEWGVGMEINGDDE 399 (468)
Q Consensus 330 ~v~~~~p~~~---il~~~~~~~~v~--hgG~~s~~-eal~~Gv----P~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~ 399 (468)
++.+.+|+.+ ++.-++| ++|| .-|+|-|. |.++++. |+|.-=+.+ |. +.+.-++.++
T Consensus 365 ~~~~~v~~~el~alYr~ADV-~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaG-----aa---~~l~~AllVN---- 431 (487)
T TIGR02398 365 FFTRSLPYEEVSAWFAMADV-MWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAG-----AA---VELKGALLTN---- 431 (487)
T ss_pred EEcCCCCHHHHHHHHHhCCE-EEECccccccCcchhhHHhhhcCCCCCEEEecccc-----ch---hhcCCCEEEC----
Confidence 3445677765 5556666 4554 34888655 9999987 555443322 11 2333466776
Q ss_pred CcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHhcCC
Q 012217 400 DVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEILLSNK 459 (468)
Q Consensus 400 ~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~~~~~~~~~ 459 (468)
-.+.++++++|.++|+.+.. +-++|-+++.+.+++ -++..=.++|++.|.+..+
T Consensus 432 P~d~~~~A~ai~~AL~m~~~-Er~~R~~~l~~~v~~-----~d~~~W~~~fl~~l~~~~~ 485 (487)
T TIGR02398 432 PYDPVRMDETIYVALAMPKA-EQQARMREMFDAVNY-----YDVQRWADEFLAAVSPQAQ 485 (487)
T ss_pred CCCHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHhh-----CCHHHHHHHHHHHhhhccc
Confidence 46899999999999987633 345566666666554 2555567788888876543
No 244
>PF13450 NAD_binding_8: NAD(P)-binding Rossmann-like domain; PDB: 3KA7_A 1V0J_D 3INR_B 3KYB_B 3GF4_A 2BI8_A 3INT_B 1WAM_A 2BI7_A 3MJ4_G ....
Probab=29.80 E-value=63 Score=23.27 Aligned_cols=19 Identities=26% Similarity=0.443 Sum_probs=16.4
Q ss_pred HHHHHHHHhCCCEEEEEeC
Q 012217 28 LKLAKLLHHKGFHITFVNT 46 (468)
Q Consensus 28 l~La~~L~~rGh~Vt~~t~ 46 (468)
+..|..|+++|++|+++=.
T Consensus 9 l~aA~~L~~~g~~v~v~E~ 27 (68)
T PF13450_consen 9 LAAAYYLAKAGYRVTVFEK 27 (68)
T ss_dssp HHHHHHHHHTTSEEEEEES
T ss_pred HHHHHHHHHCCCcEEEEec
Confidence 6778999999999999954
No 245
>TIGR00524 eIF-2B_rel eIF-2B alpha/beta/delta-related uncharacterized proteins. This model, eIF-2B_rel, describes half of a superfamily, where the other half consists of eukaryotic translation initiation factor 2B (eIF-2B) subunits alpha, beta, and delta. It is unclear whether the eIF-2B_rel set is monophyletic, or whether they are all more closely related to each other than to any eIF-2B subunit because the eIF-2B clade is highly derived. Members of this branch of the family are all uncharacterized with respect to function and are found in the Archaea, Bacteria, and Eukarya, although a number are described as putative translation intiation factor components. Proteins found by eIF-2B_rel include at least three clades, including a set of uncharacterized eukaryotic proteins, a set found in some but not all Archaea, and a set universal so far among the Archaea and closely related to several uncharacterized bacterial proteins.
Probab=29.59 E-value=74 Score=30.79 Aligned_cols=18 Identities=11% Similarity=0.178 Sum_probs=13.9
Q ss_pred hHHHHHHHcCCCeEEEcc
Q 012217 99 FTITAAQQLGLPIVLFFT 116 (468)
Q Consensus 99 ~~~~vA~~lgIP~v~~~~ 116 (468)
....+|+.+|+|++++.+
T Consensus 222 ~lA~~Ak~~~vPv~V~a~ 239 (303)
T TIGR00524 222 QLAVLAKEFRIPFFVAAP 239 (303)
T ss_pred HHHHHHHHhCCCEEEecc
Confidence 344578999999999855
No 246
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=29.56 E-value=72 Score=30.49 Aligned_cols=31 Identities=16% Similarity=0.066 Sum_probs=27.2
Q ss_pred CCccHHHHHHHHHHHHhCCCEEEEEeCCcch
Q 012217 20 FQSHIKAMLKLAKLLHHKGFHITFVNTEFNH 50 (468)
Q Consensus 20 ~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~ 50 (468)
..|+-.-+..+++.|.+.||+|++++.....
T Consensus 13 ~~g~~~~~~~~~~~l~~~g~~v~v~~~~~~~ 43 (377)
T cd03798 13 NGGGGIFVKELARALAKRGVEVTVLAPGPWG 43 (377)
T ss_pred CchHHHHHHHHHHHHHHCCCceEEEecCCCC
Confidence 4889999999999999999999999986543
No 247
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=29.40 E-value=1e+02 Score=32.69 Aligned_cols=94 Identities=20% Similarity=0.237 Sum_probs=51.8
Q ss_pred cChHHhhcCCCcceeeeccC-hh-hHHHHHhcCCcEEecCCCC-Ccccch---hhheeeceeEEEEeCCCCCcchhHHHH
Q 012217 335 CPQEEVLKHPSIGGFLTHCG-WN-SIVESLCSGVPMICWPFTG-DQPTNG---RYVCNEWGVGMEINGDDEDVIRNEVEK 408 (468)
Q Consensus 335 ~p~~~il~~~~~~~~v~hgG-~~-s~~eal~~GvP~v~~P~~~-DQ~~na---~~~~~~~g~g~~~~~~~~~~~~~~l~~ 408 (468)
+++.+++.-++++.|-+-== || |-+||+++|||.|+-=+.+ -++.+- .. ...|+-+.=+ ..-+.++..+
T Consensus 461 l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsGFG~~~~~~~~~~--~~~GV~VvdR---~~~n~~e~v~ 535 (633)
T PF05693_consen 461 LDYYDFVRGCDLGVFPSYYEPWGYTPLECTAFGVPSITTNLSGFGCWMQEHIEDP--EEYGVYVVDR---RDKNYDESVN 535 (633)
T ss_dssp S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHTT--EEEETTBHHHHHHHTTS-HH--GGGTEEEE-S---SSS-HHHHHH
T ss_pred CCHHHHhccCceeeeccccccccCChHHHhhcCCceeeccchhHHHHHHHhhccC--cCCcEEEEeC---CCCCHHHHHH
Confidence 36777777777755655211 33 8899999999999987733 222211 11 2335554434 3456666666
Q ss_pred HHHHHhc-----C-chHHHHHHHHHHHHHHH
Q 012217 409 LVREMME-----G-EKGKQMRNKAMEWKGLA 433 (468)
Q Consensus 409 av~~~l~-----~-~~~~~~~~~a~~l~~~~ 433 (468)
.|.+.|. + .+....|++|++|++++
T Consensus 536 ~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~ 566 (633)
T PF05693_consen 536 QLADFLYKFCQLSRRQRIIQRNRAERLSDLA 566 (633)
T ss_dssp HHHHHHHHHHT--HHHHHHHHHHHHHHGGGG
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhC
Confidence 6666553 1 23457888888888763
No 248
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=29.37 E-value=98 Score=29.60 Aligned_cols=32 Identities=13% Similarity=0.121 Sum_probs=25.2
Q ss_pred cEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012217 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 11 ~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~ 47 (468)
|+|+++-.++.| ..+|..|++.||+|+++..+
T Consensus 1 mkI~IiG~G~iG-----~~~a~~L~~~g~~V~~~~r~ 32 (305)
T PRK12921 1 MRIAVVGAGAVG-----GTFGGRLLEAGRDVTFLVRP 32 (305)
T ss_pred CeEEEECCCHHH-----HHHHHHHHHCCCceEEEecH
Confidence 367888777766 45788899999999999763
No 249
>PRK06048 acetolactate synthase 3 catalytic subunit; Reviewed
Probab=29.32 E-value=3e+02 Score=29.12 Aligned_cols=28 Identities=14% Similarity=0.332 Sum_probs=22.3
Q ss_pred CCCcceeeeccCh------hhHHHHHhcCCcEEecC
Q 012217 343 HPSIGGFLTHCGW------NSIVESLCSGVPMICWP 372 (468)
Q Consensus 343 ~~~~~~~v~hgG~------~s~~eal~~GvP~v~~P 372 (468)
.+.+ +++|.|- +.+.+|...++|+|++-
T Consensus 70 ~~~v--~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 103 (561)
T PRK06048 70 KVGV--CVATSGPGATNLVTGIATAYMDSVPIVALT 103 (561)
T ss_pred CCeE--EEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 4555 8888774 47889999999999983
No 250
>COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism]
Probab=29.19 E-value=1.2e+02 Score=29.34 Aligned_cols=38 Identities=11% Similarity=0.125 Sum_probs=33.3
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~ 47 (468)
...|.+.-.|+.|--.-.=.|.++|.++||+|.++.-.
T Consensus 51 a~viGITG~PGaGKSTli~~L~~~l~~~G~rVaVlAVD 88 (323)
T COG1703 51 AHVIGITGVPGAGKSTLIEALGRELRERGHRVAVLAVD 88 (323)
T ss_pred CcEEEecCCCCCchHHHHHHHHHHHHHCCcEEEEEEEC
Confidence 34777888899999999999999999999999988643
No 251
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=29.05 E-value=5.8e+02 Score=25.32 Aligned_cols=147 Identities=14% Similarity=0.207 Sum_probs=0.0
Q ss_pred CCCceEEEeecCCcCCCHHHHHHHHHHHH---------cCCCCEEEEEcCCCCCCCCCCCchhHHHHhh----cCceEe-
Q 012217 267 EPKSVIYVNFGSFIFMNKQQLIEVAMGLV---------NSNHPFLWIIRPDLVTGETADLPAEFEVKAK----EKGFVA- 332 (468)
Q Consensus 267 ~~~~vv~vs~GS~~~~~~~~~~~~~~~l~---------~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~- 332 (468)
+.++-++|| |...-+.|.+..+++||. ..+.+-+..+-.+ .+.+.+.+.+.+. .++.++
T Consensus 252 ~~~pallvs--STswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITG-----KGPlkE~Y~~~I~~~~~~~v~~~t 324 (444)
T KOG2941|consen 252 PERPALLVS--STSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITG-----KGPLKEKYSQEIHEKNLQHVQVCT 324 (444)
T ss_pred cCCCeEEEe--cCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcC-----CCchhHHHHHHHHHhcccceeeee
Q ss_pred ccc---ChHHhhcCCCcceeeeccChh-----hHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchh
Q 012217 333 SWC---PQEEVLKHPSIGGFLTHCGWN-----SIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRN 404 (468)
Q Consensus 333 ~~~---p~~~il~~~~~~~~v~hgG~~-----s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~ 404 (468)
.|+ .+..+|+.++.|..+|-.-.| -+..-.-+|+|++.+ -+.--..+|+.-.-|+... +.+
T Consensus 325 pWL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~-----~fkcl~ELVkh~eNGlvF~------Ds~ 393 (444)
T KOG2941|consen 325 PWLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAV-----NFKCLDELVKHGENGLVFE------DSE 393 (444)
T ss_pred cccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeee-----cchhHHHHHhcCCCceEec------cHH
Q ss_pred HHHHHHHHHhc----CchH-HHHHHHHHHHHH
Q 012217 405 EVEKLVREMME----GEKG-KQMRNKAMEWKG 431 (468)
Q Consensus 405 ~l~~av~~~l~----~~~~-~~~~~~a~~l~~ 431 (468)
++++.+..++. +.+. .++++|+++-++
T Consensus 394 eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~~e 425 (444)
T KOG2941|consen 394 ELAEQLQMLFKNFPDNADELNQLKKNLREEQE 425 (444)
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHhhHHHHh
No 252
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=28.81 E-value=77 Score=23.36 Aligned_cols=23 Identities=22% Similarity=0.268 Sum_probs=19.5
Q ss_pred HHHHHHHHHHhCCCEEEEEeCCc
Q 012217 26 AMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 26 P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
--+++|..|+++|.+||++....
T Consensus 10 ig~E~A~~l~~~g~~vtli~~~~ 32 (80)
T PF00070_consen 10 IGIELAEALAELGKEVTLIERSD 32 (80)
T ss_dssp HHHHHHHHHHHTTSEEEEEESSS
T ss_pred HHHHHHHHHHHhCcEEEEEeccc
Confidence 34789999999999999998653
No 253
>PRK06372 translation initiation factor IF-2B subunit delta; Provisional
Probab=28.52 E-value=1.5e+02 Score=27.89 Aligned_cols=67 Identities=15% Similarity=0.105 Sum_probs=35.9
Q ss_pred HHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCC-CCC-CCCCCCCCCcCCCCCCCcccchHHHHHH
Q 012217 28 LKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIP-DGL-PASSDESPTAQDAYSLDGFLPFTITAAQ 105 (468)
Q Consensus 28 l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l~-~~~-~~~~~~~~~~~~~~~~D~~~~~~~~vA~ 105 (468)
..+|++|++.|.+||+++-..-...+. .++.+-+. +.+ ..+ ... ...-......+|+
T Consensus 124 ~~~a~~L~~~GI~vtli~Dsa~~~~m~------------~vd~VlvGAd~V~~nG----~v~-----nkvGT~~~Al~A~ 182 (253)
T PRK06372 124 IDMAKLLVKSGIDVVLLTDASMCEAVL------------NVDAVIVGSDSVLYDG----GLI-----HKNGTFPLALCAR 182 (253)
T ss_pred HHHHHHHHHCCCCEEEEehhHHHHHHH------------hCCEEEECccEEecCC----CEe-----ehhhHHHHHHHHH
Confidence 368888888888888775432222221 24444432 111 111 111 1122234456789
Q ss_pred HcCCCeEEEc
Q 012217 106 QLGLPIVLFF 115 (468)
Q Consensus 106 ~lgIP~v~~~ 115 (468)
.+++|++++.
T Consensus 183 ~~~vPv~V~~ 192 (253)
T PRK06372 183 YLKKPFYSLT 192 (253)
T ss_pred HcCCCEEEEe
Confidence 9999999963
No 254
>PRK05772 translation initiation factor IF-2B subunit alpha; Provisional
Probab=28.17 E-value=2.9e+02 Score=27.51 Aligned_cols=19 Identities=26% Similarity=0.434 Sum_probs=14.5
Q ss_pred HHHHHHHcCCCeEEEcccc
Q 012217 100 TITAAQQLGLPIVLFFTIS 118 (468)
Q Consensus 100 ~~~vA~~lgIP~v~~~~~~ 118 (468)
...+|+.+|||+++..++.
T Consensus 272 lA~~Ak~~~vPfyV~ap~~ 290 (363)
T PRK05772 272 EAVIAHELGIPFYALAPTS 290 (363)
T ss_pred HHHHHHHhCCCEEEEcccc
Confidence 3557899999999986543
No 255
>TIGR02113 coaC_strep phosphopantothenoylcysteine decarboxylase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the N-terminal region of TIGR00521, corresponding to phosphopantothenoylcysteine decarboxylase activity.
Probab=28.05 E-value=80 Score=27.85 Aligned_cols=41 Identities=12% Similarity=0.102 Sum_probs=30.5
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHH
Q 012217 12 HAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRL 53 (468)
Q Consensus 12 ~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~ 53 (468)
+|++.-.++. ...-...+.+.|.++|++|.++.++...+.+
T Consensus 2 ~I~lgvtGs~-~a~~~~~ll~~L~~~g~~V~vi~T~~A~~fi 42 (177)
T TIGR02113 2 KILLAVTGSI-AAYKAADLTSQLTKLGYDVTVLMTQAATQFI 42 (177)
T ss_pred EEEEEEcCHH-HHHHHHHHHHHHHHCCCEEEEEEChHHHhhc
Confidence 4555555554 4556679999999999999999987655443
No 256
>TIGR02700 flavo_MJ0208 archaeoflavoprotein, MJ0208 family. This model describes one of two paralogous families of archaealflavoprotein. The other, described by TIGR02699 and typified by the partially characterized AF1518 of Archaeoglobus fulgidus, is a homodimeric FMN-containing flavoprotein that accepts electrons from ferredoxin and can transfer them to various oxidoreductases. The function of this protein family is unknown.
Probab=28.04 E-value=1e+02 Score=28.52 Aligned_cols=36 Identities=6% Similarity=0.045 Sum_probs=27.5
Q ss_pred CCCccHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHH
Q 012217 19 PFQSHIKAMLKLAKLLHHK--GFHITFVNTEFNHRRLL 54 (468)
Q Consensus 19 p~~GHi~P~l~La~~L~~r--Gh~Vt~~t~~~~~~~~~ 54 (468)
++.+=+.=.+.|.+.|.++ |++|.++.++...+.+.
T Consensus 8 Gs~~~~~~~~~l~~~L~~~~~g~~V~vv~T~~a~~~i~ 45 (234)
T TIGR02700 8 GAGHLLVESFQVMKELKREIEELRVSTFVSRAGEEVVR 45 (234)
T ss_pred CccHhHHHHHHHHHHHHhhcCCCeEEEEEChhHHhHHh
Confidence 3333336889999999999 99999999976655443
No 257
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=28.03 E-value=89 Score=29.51 Aligned_cols=44 Identities=14% Similarity=0.121 Sum_probs=38.5
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHh
Q 012217 12 HAVCIPSPFQSHIKAMLKLAKLLHHK--GFHITFVNTEFNHRRLLK 55 (468)
Q Consensus 12 ~il~~p~p~~GHi~P~l~La~~L~~r--Gh~Vt~~t~~~~~~~~~~ 55 (468)
+|+++-..+.|++.=+..+.+.|+++ +-+|++++.+.+.+.++.
T Consensus 1 kILii~~~~iGD~i~~~p~l~~Lk~~~P~~~I~~l~~~~~~~l~~~ 46 (279)
T cd03789 1 RILVIRLSWIGDVVLATPLLRALKARYPDARITVLAPPWFAPLLEL 46 (279)
T ss_pred CEEEEecccHHHHHHHHHHHHHHHHHCCCCEEEEEEChhhHHHHhc
Confidence 58899999999999999999999997 489999999877766554
No 258
>cd02034 CooC The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH). CODH from Rhodospirillum rubrum catalyzes the reversible oxidation of CO to CO2. CODH contains a nickel-iron-sulfur cluster (C-center) and an iron-sulfur cluster (B-center). CO oxidation occurs at the C-center. Three accessory proteins encoded by cooCTJ genes are involved in nickel incorporation into a nickel site. CooC functions as a nickel insertase that mobilizes nickel to apoCODH using energy released from ATP hydrolysis. CooC is a homodimer and has NTPase activities. Mutation at the P-loop abolishs its function.
Probab=28.02 E-value=1.3e+02 Score=24.31 Aligned_cols=37 Identities=14% Similarity=0.061 Sum_probs=32.9
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 12 HAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 12 ~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
||++..-++.|-......|++.|+++|.+|.++-+..
T Consensus 1 ~i~~~GkgG~GKTt~a~~la~~l~~~g~~V~~id~D~ 37 (116)
T cd02034 1 KIAITGKGGVGKTTIAALLARYLAEKGKPVLAIDADP 37 (116)
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEECCc
Confidence 4788888999999999999999999999999887654
No 259
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=27.87 E-value=1.1e+02 Score=24.94 Aligned_cols=35 Identities=14% Similarity=0.196 Sum_probs=28.5
Q ss_pred EEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 14 VCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 14 l~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
+++..+..|+-.-+..+++.|+++|+.|..+..+.
T Consensus 2 vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~ 36 (145)
T PF12695_consen 2 VVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPG 36 (145)
T ss_dssp EEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTT
T ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCC
Confidence 56666777778889999999999999998885543
No 260
>PRK08334 translation initiation factor IF-2B subunit beta; Validated
Probab=27.73 E-value=1.2e+02 Score=30.00 Aligned_cols=18 Identities=17% Similarity=0.241 Sum_probs=14.2
Q ss_pred hHHHHHHHcCCCeEEEcc
Q 012217 99 FTITAAQQLGLPIVLFFT 116 (468)
Q Consensus 99 ~~~~vA~~lgIP~v~~~~ 116 (468)
....+|+.+|||+++..+
T Consensus 263 ~lA~~Ak~~~vPfyV~Ap 280 (356)
T PRK08334 263 TLAVLAKEHGIPFFTVAP 280 (356)
T ss_pred HHHHHHHHhCCCEEEEcc
Confidence 345678999999999864
No 261
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=27.62 E-value=1.4e+02 Score=28.78 Aligned_cols=55 Identities=16% Similarity=0.295 Sum_probs=38.2
Q ss_pred cCCCcceeeeccChhhHHHHHhc----CCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCc
Q 012217 342 KHPSIGGFLTHCGWNSIVESLCS----GVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGE 417 (468)
Q Consensus 342 ~~~~~~~~v~hgG~~s~~eal~~----GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~ 417 (468)
..+++ +|+-||-||+.+++.. ++|++++-. - .+|.-. .++.+++.++|.++++++
T Consensus 62 ~~~d~--vi~~GGDGt~l~~~~~~~~~~~pilGIn~--------G------~lGFL~-----~~~~~~~~~~l~~~~~g~ 120 (291)
T PRK02155 62 ARADL--AVVLGGDGTMLGIGRQLAPYGVPLIGINH--------G------RLGFIT-----DIPLDDMQETLPPMLAGN 120 (291)
T ss_pred cCCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEcC--------C------Cccccc-----cCCHHHHHHHHHHHHcCC
Confidence 34566 9999999999999763 677777631 1 123221 467788888998888654
No 262
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=27.61 E-value=1.3e+02 Score=28.43 Aligned_cols=53 Identities=21% Similarity=0.268 Sum_probs=36.9
Q ss_pred CCcceeeeccChhhHHHHHh------cCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCc
Q 012217 344 PSIGGFLTHCGWNSIVESLC------SGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGE 417 (468)
Q Consensus 344 ~~~~~~v~hgG~~s~~eal~------~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~ 417 (468)
+++ +|+-||-||+..++. .++|++++-. - .+|.- -.++.+++.+++.++++++
T Consensus 36 ~Dl--vi~iGGDGT~L~a~~~~~~~~~~iPilGIN~--------G------~lGFL-----~~~~~~~~~~~l~~i~~g~ 94 (265)
T PRK04885 36 PDI--VISVGGDGTLLSAFHRYENQLDKVRFVGVHT--------G------HLGFY-----TDWRPFEVDKLVIALAKDP 94 (265)
T ss_pred CCE--EEEECCcHHHHHHHHHhcccCCCCeEEEEeC--------C------Cceec-----ccCCHHHHHHHHHHHHcCC
Confidence 455 999999999999986 4788888732 1 12322 1356777888888887654
No 263
>COG1422 Predicted membrane protein [Function unknown]
Probab=27.60 E-value=1.8e+02 Score=26.13 Aligned_cols=37 Identities=11% Similarity=0.181 Sum_probs=26.9
Q ss_pred HHHHHHHHHhcCchH-HHHHHHHHHHHHHHHHHhCCCC
Q 012217 405 EVEKLVREMMEGEKG-KQMRNKAMEWKGLAEEAAAPHG 441 (468)
Q Consensus 405 ~l~~av~~~l~~~~~-~~~~~~a~~l~~~~~~a~~~gg 441 (468)
-+..-+++.+-|-+. +++++.++++++++++|..+|.
T Consensus 59 l~~~i~~~~liD~ekm~~~qk~m~efq~e~~eA~~~~d 96 (201)
T COG1422 59 LYITILQKLLIDQEKMKELQKMMKEFQKEFREAQESGD 96 (201)
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 344556666666544 6899999999999999865543
No 264
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=27.54 E-value=1.8e+02 Score=25.48 Aligned_cols=56 Identities=16% Similarity=0.163 Sum_probs=42.3
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPD 75 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l~~ 75 (468)
.++|.+.--|+.|-..-.+.++..|.+.|+.|-=+.++.-++-=.+ -|++.+.+..
T Consensus 5 ~mki~ITG~PGvGKtTl~~ki~e~L~~~g~kvgGf~t~EVR~gGkR----------~GF~Ivdl~t 60 (179)
T COG1618 5 AMKIFITGRPGVGKTTLVLKIAEKLREKGYKVGGFITPEVREGGKR----------IGFKIVDLAT 60 (179)
T ss_pred ceEEEEeCCCCccHHHHHHHHHHHHHhcCceeeeEEeeeeecCCeE----------eeeEEEEccC
Confidence 5799999999999999999999999999999965555443321111 1777777753
No 265
>PF14626 RNase_Zc3h12a_2: Zc3h12a-like Ribonuclease NYN domain
Probab=27.22 E-value=61 Score=26.37 Aligned_cols=30 Identities=10% Similarity=0.236 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHhCCCEEEEEeCCcchHHH
Q 012217 24 IKAMLKLAKLLHHKGFHITFVNTEFNHRRL 53 (468)
Q Consensus 24 i~P~l~La~~L~~rGh~Vt~~t~~~~~~~~ 53 (468)
+.|++.+.-.+.-|||.+|++-|..+...+
T Consensus 9 Vk~L~eIll~FilrGHKT~vyLP~yY~~~~ 38 (122)
T PF14626_consen 9 VKALVEILLHFILRGHKTVVYLPKYYKNYV 38 (122)
T ss_pred HHHHHHHHHHHHhccCeeEEEChHHHhccc
Confidence 578889999999999999999998776543
No 266
>PRK05720 mtnA methylthioribose-1-phosphate isomerase; Reviewed
Probab=27.09 E-value=1e+02 Score=30.38 Aligned_cols=19 Identities=21% Similarity=0.156 Sum_probs=14.4
Q ss_pred hHHHHHHHcCCCeEEEccc
Q 012217 99 FTITAAQQLGLPIVLFFTI 117 (468)
Q Consensus 99 ~~~~vA~~lgIP~v~~~~~ 117 (468)
....+|+.+|+|+++..++
T Consensus 250 ~lAl~Ak~~~vPfyV~a~~ 268 (344)
T PRK05720 250 QLAIAAKYHGVPFYVAAPS 268 (344)
T ss_pred HHHHHHHHhCCCEEEeccc
Confidence 3456789999999997553
No 267
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=27.04 E-value=4.2e+02 Score=24.25 Aligned_cols=44 Identities=14% Similarity=0.065 Sum_probs=33.9
Q ss_pred hhhhccccCCCCceEEEeecCCcCCCHHHHHHHHHHHHcCCCCEE
Q 012217 258 ECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFL 302 (468)
Q Consensus 258 ~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~l 302 (468)
.+.+|+... .+++.||=+-|...-...-+++..++|+..|..+.
T Consensus 23 ~i~n~l~g~-~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~ 66 (224)
T COG3340 23 FIANFLQGK-RKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVS 66 (224)
T ss_pred HHHHHhcCC-CceEEEEecCccccchHHHHHHHHHHHHHcCCeee
Confidence 344555543 55799999999887667778889999999998865
No 268
>TIGR01281 DPOR_bchL light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein. The BchL peptide (ChlL in chloroplast and cyanobacteria) is an ATP-binding iron-sulfur protein of the dark form protochlorophyllide reductase, an enzyme similar to nitrogenase. This subunit resembles the nitrogenase NifH subunit.
Probab=27.01 E-value=1.1e+02 Score=28.68 Aligned_cols=36 Identities=6% Similarity=-0.066 Sum_probs=31.3
Q ss_pred cEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012217 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (468)
Q Consensus 11 ~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~ 46 (468)
|.|.++.=++.|-..-...||..|+++|++|.++=.
T Consensus 1 ~~i~~~gKGGVGKTT~~~nLA~~La~~g~rVLliD~ 36 (268)
T TIGR01281 1 MILAVYGKGGIGKSTTSSNLSVAFAKLGKRVLQIGC 36 (268)
T ss_pred CEEEEEcCCcCcHHHHHHHHHHHHHhCCCeEEEEec
Confidence 357777678999999999999999999999998833
No 269
>PTZ00318 NADH dehydrogenase-like protein; Provisional
Probab=26.85 E-value=80 Score=32.11 Aligned_cols=44 Identities=18% Similarity=0.287 Sum_probs=30.0
Q ss_pred CCCCCCCCCCcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012217 1 MESKPKACSKVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFN 49 (468)
Q Consensus 1 m~~~~~~~~~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~ 49 (468)
|.+.-....+.|||++--+..| +..|+.|...+++||++....+
T Consensus 1 ~~~~~~~~~~~~vVIvGgG~aG-----l~~a~~L~~~~~~ItlI~~~~~ 44 (424)
T PTZ00318 1 MRSRTARLKKPNVVVLGTGWAG-----AYFVRNLDPKKYNITVISPRNH 44 (424)
T ss_pred CCCcccCCCCCeEEEECCCHHH-----HHHHHHhCcCCCeEEEEcCCCC
Confidence 5554333446799888755444 4467888777899999987544
No 270
>PRK00652 lpxK tetraacyldisaccharide 4'-kinase; Reviewed
Probab=26.63 E-value=1.2e+02 Score=29.72 Aligned_cols=37 Identities=19% Similarity=0.191 Sum_probs=32.8
Q ss_pred cEEEE--EcCCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012217 11 VHAVC--IPSPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 11 ~~il~--~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~ 47 (468)
+-|.+ ++.++.|-.--.+.|++.|.++|++|.+++--
T Consensus 50 pvIsVGNi~vGGtGKTP~v~~L~~~l~~~g~~~~ilsRG 88 (325)
T PRK00652 50 PVIVVGNITVGGTGKTPVVIALAEQLQARGLKPGVVSRG 88 (325)
T ss_pred CEEEEcCeeCCCCChHHHHHHHHHHHHHCCCeEEEECCC
Confidence 45666 78999999999999999999999999999753
No 271
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=26.54 E-value=92 Score=29.75 Aligned_cols=30 Identities=13% Similarity=0.130 Sum_probs=24.2
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012217 12 HAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (468)
Q Consensus 12 ~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~ 46 (468)
+|+++-.++.| ..+|..|++.||+|+++..
T Consensus 2 ~I~IiG~G~~G-----~~~a~~L~~~g~~V~~~~r 31 (304)
T PRK06522 2 KIAILGAGAIG-----GLFGAALAQAGHDVTLVAR 31 (304)
T ss_pred EEEEECCCHHH-----HHHHHHHHhCCCeEEEEEC
Confidence 67777766666 5678889999999999986
No 272
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=26.51 E-value=82 Score=28.72 Aligned_cols=36 Identities=14% Similarity=0.103 Sum_probs=31.5
Q ss_pred cEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012217 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (468)
Q Consensus 11 ~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~ 46 (468)
+-|++.-+|+.|...---+||+.|.+++|+|..++.
T Consensus 2 pLiIlTGyPgsGKTtfakeLak~L~~~i~~vi~l~k 37 (261)
T COG4088 2 PLIILTGYPGSGKTTFAKELAKELRQEIWRVIHLEK 37 (261)
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHhhhhccccch
Confidence 357777889999999999999999999999977754
No 273
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=26.43 E-value=1.1e+02 Score=29.45 Aligned_cols=26 Identities=12% Similarity=0.100 Sum_probs=21.9
Q ss_pred cHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 23 HIKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 23 Hi~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
.-.-+..+++.|.++||+|++++...
T Consensus 13 ~~~~~~~~~~~L~~~g~~v~v~~~~~ 38 (355)
T cd03799 13 SETFILREILALEAAGHEVEIFSLRP 38 (355)
T ss_pred chHHHHHHHHHHHhCCCeEEEEEecC
Confidence 44668899999999999999998743
No 274
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=26.29 E-value=1.4e+02 Score=28.80 Aligned_cols=18 Identities=17% Similarity=0.167 Sum_probs=14.0
Q ss_pred hHHHHHHHcCCCeEEEcc
Q 012217 99 FTITAAQQLGLPIVLFFT 116 (468)
Q Consensus 99 ~~~~vA~~lgIP~v~~~~ 116 (468)
....+|+.+++|++++.+
T Consensus 208 ~lA~~Ak~~~vPv~V~a~ 225 (301)
T TIGR00511 208 QLALAAREARVPFMVAAE 225 (301)
T ss_pred HHHHHHHHhCCCEEEEcc
Confidence 345578999999999854
No 275
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=26.24 E-value=3.4e+02 Score=26.14 Aligned_cols=54 Identities=19% Similarity=0.314 Sum_probs=38.5
Q ss_pred CCCcceeeeccChhhHHHHHh----cCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCc
Q 012217 343 HPSIGGFLTHCGWNSIVESLC----SGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGE 417 (468)
Q Consensus 343 ~~~~~~~v~hgG~~s~~eal~----~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~ 417 (468)
.+++ +|+=||-||+.+++. .++|++++... .+|. +. ..+.+++.++|.++++++
T Consensus 62 ~~d~--vi~~GGDGt~l~~~~~~~~~~~Pvlgin~G--------------~lGF-l~----~~~~~~~~~~l~~~~~g~ 119 (295)
T PRK01231 62 VCDL--VIVVGGDGSLLGAARALARHNVPVLGINRG--------------RLGF-LT----DIRPDELEFKLAEVLDGH 119 (295)
T ss_pred CCCE--EEEEeCcHHHHHHHHHhcCCCCCEEEEeCC--------------cccc-cc----cCCHHHHHHHHHHHHcCC
Confidence 3555 999999999999875 36787777441 1231 22 467899999999998654
No 276
>PRK14092 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Probab=26.23 E-value=1.5e+02 Score=25.83 Aligned_cols=30 Identities=20% Similarity=0.244 Sum_probs=23.0
Q ss_pred CCceEEEeecCCcCCCHHHHHHHHHHHHcC
Q 012217 268 PKSVIYVNFGSFIFMNKQQLIEVAMGLVNS 297 (468)
Q Consensus 268 ~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~ 297 (468)
.+-.+|+++||-.....+.+...++.|.+.
T Consensus 6 ~~~~v~i~LGSNlg~~~~~l~~A~~~L~~~ 35 (163)
T PRK14092 6 ASALAYVGLGANLGDAAATLRSVLAELAAA 35 (163)
T ss_pred cCCEEEEEecCchHhHHHHHHHHHHHHHhC
Confidence 445899999998865667777788888764
No 277
>cd01452 VWA_26S_proteasome_subunit 26S proteasome plays a major role in eukaryotic protein breakdown, especially for ubiquitin-tagged proteins. It is an ATP-dependent protease responsible for the bulk of non-lysosomal proteolysis in eukaryotes, often using covalent modification of proteins by ubiquitylation. It consists of a 20S proteolytic core particle (CP) and a 19S regulatory particle (RP). The CP is an ATP independent peptidase consisting of hydrolyzing activities. One or both ends of CP carry the RP that confers both ubiquitin and ATP dependence to the 26S proteosome. The RP's proposed functions include recognition of substrates and translocation of these to CP for proteolysis. The RP can dissociate into a stable lid and base subcomplexes. The base is composed of three non-ATPase subunits (Rpn 1, 2 and 10). A single residue in the vWA domain of Rpn10 has been implicated to be responsible for stabilizing the lid-base association.
Probab=26.05 E-value=3.5e+02 Score=24.05 Aligned_cols=62 Identities=23% Similarity=0.360 Sum_probs=43.2
Q ss_pred EEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC---CcchHHHHhhhcCCCCCCCCCeeEEeCCCC
Q 012217 13 AVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT---EFNHRRLLKARGQHSLDGLPSFRFEAIPDG 76 (468)
Q Consensus 13 il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~---~~~~~~~~~~~~~~~~~~~~gi~f~~l~~~ 76 (468)
|+|+..+..-|-.=+..+++.|++.|.+|.++.- ..+.+.++...... .+..+-+|+.+|.+
T Consensus 111 vi~v~S~~~~d~~~i~~~~~~lkk~~I~v~vI~~G~~~~~~~~l~~~~~~~--~~~~~s~~~~~~~~ 175 (187)
T cd01452 111 VAFVGSPIEEDEKDLVKLAKRLKKNNVSVDIINFGEIDDNTEKLTAFIDAV--NGKDGSHLVSVPPG 175 (187)
T ss_pred EEEEecCCcCCHHHHHHHHHHHHHcCCeEEEEEeCCCCCCHHHHHHHHHHh--cCCCCceEEEeCCC
Confidence 8888888788877788999999999999988863 34555555543211 11225788888754
No 278
>PRK11253 ldcA L,D-carboxypeptidase A; Provisional
Probab=26.04 E-value=2.2e+02 Score=27.56 Aligned_cols=74 Identities=11% Similarity=0.128 Sum_probs=43.3
Q ss_pred cCCCHHHHHHHHHHH--HcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhc----CCCcceeeecc
Q 012217 280 IFMNKQQLIEVAMGL--VNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLK----HPSIGGFLTHC 353 (468)
Q Consensus 280 ~~~~~~~~~~~~~~l--~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~----~~~~~~~v~hg 353 (468)
...+.+..+++.+++ .+. .+.||.++++.. -..+.++++...+-. ||.+ ||-..
T Consensus 47 agtd~~Ra~dL~~a~a~~dp-i~aI~~~rGGyg-----------------~~rlLp~Ld~~~i~~~~k~~PK~--~iGyS 106 (305)
T PRK11253 47 AGTDGERLADLNSLADLTTP-NTIVLAVRGGYG-----------------ASRLLAGIDWQGLAARQQDDPLL--IVGHS 106 (305)
T ss_pred CCCHHHHHHHHHHHHhcCCC-ccEEEEecccCC-----------------HhHhhhhCCHHHHhhhhccCCCE--EEEEc
Confidence 444567788899988 555 999999987621 123344444444432 3334 66555
Q ss_pred ChhhHHHHH--hcCCcEEecCC
Q 012217 354 GWNSIVESL--CSGVPMICWPF 373 (468)
Q Consensus 354 G~~s~~eal--~~GvP~v~~P~ 373 (468)
-....+-++ ..|+..+-=|+
T Consensus 107 DiTaL~~al~~~~g~~t~hGp~ 128 (305)
T PRK11253 107 DFTAIQLALLAQANVITFSGPM 128 (305)
T ss_pred HHHHHHHHHHHhcCceEEECcc
Confidence 555555554 35555555554
No 279
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=25.84 E-value=71 Score=31.93 Aligned_cols=69 Identities=19% Similarity=0.217 Sum_probs=45.8
Q ss_pred CcceeeeccChhhHHHHHhc-----------------CCcEEecCCCCCcccchhhheeeceeEEEEe-CC-CCCcchhH
Q 012217 345 SIGGFLTHCGWNSIVESLCS-----------------GVPMICWPFTGDQPTNGRYVCNEWGVGMEIN-GD-DEDVIRNE 405 (468)
Q Consensus 345 ~~~~~v~hgG~~s~~eal~~-----------------GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~-~~-~~~~~~~~ 405 (468)
+.++++|.||..+.+-|+.+ +.|+|.++-.. |+-+.+.. ..+|+|+..- .+ +..++.++
T Consensus 103 ~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~a-H~S~~Kaa-~~lGlg~~~I~~~~~~~md~~~ 180 (373)
T PF00282_consen 103 DAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQA-HYSIEKAA-RILGLGVRKIPTDEDGRMDIEA 180 (373)
T ss_dssp TSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS--THHHHHH-HHTTSEEEEE-BBTTSSB-HHH
T ss_pred CCceeEeccchHHHHHHHHHHHHHHhhhhhhccccccccccccccccc-ccHHHHhc-ceeeeEEEEecCCcchhhhHHH
Confidence 35789999998888777533 35677776544 45555544 6789995542 22 35789999
Q ss_pred HHHHHHHHhc
Q 012217 406 VEKLVREMME 415 (468)
Q Consensus 406 l~~av~~~l~ 415 (468)
|+++|.+...
T Consensus 181 L~~~l~~~~~ 190 (373)
T PF00282_consen 181 LEKALEKDIA 190 (373)
T ss_dssp HHHHHHHHHH
T ss_pred hhhhhccccc
Confidence 9999987654
No 280
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=25.77 E-value=4.1e+02 Score=27.72 Aligned_cols=165 Identities=14% Similarity=0.169 Sum_probs=92.1
Q ss_pred eEEEeecC-CcC-CCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchh---HHHHhhcCceEecccCh---HHhhc
Q 012217 271 VIYVNFGS-FIF-MNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAE---FEVKAKEKGFVASWCPQ---EEVLK 342 (468)
Q Consensus 271 vv~vs~GS-~~~-~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~p~---~~il~ 342 (468)
.-++.+-| ... ...+.+.+.+.-+-+.+.+++ .++.+. ..+... +.++.+.++.+.-|... ..+++
T Consensus 294 ~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~~~~v-ilG~gd-----~~le~~~~~la~~~~~~~~~~i~~~~~la~~i~a 367 (487)
T COG0297 294 GPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLV-LLGTGD-----PELEEALRALASRHPGRVLVVIGYDEPLAHLIYA 367 (487)
T ss_pred CcEEEEeeccccccchhHHHHHHHHHHHhCceEE-EEecCc-----HHHHHHHHHHHHhcCceEEEEeeecHHHHHHHHh
Confidence 44444444 332 233555555555545555544 333221 011111 23345666777666553 23555
Q ss_pred CCCcceeee-----ccChhhHHHHHhcCCcEEecCCCC--Cc----ccchhhheeeceeEEEEeCCCCCcchhHHHHHHH
Q 012217 343 HPSIGGFLT-----HCGWNSIVESLCSGVPMICWPFTG--DQ----PTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVR 411 (468)
Q Consensus 343 ~~~~~~~v~-----hgG~~s~~eal~~GvP~v~~P~~~--DQ----~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~ 411 (468)
-+++ |+- -||. |=++|+++|.+-|+.+..+ |- ..++ . ..-|.|+.+. ..+++.++.+++
T Consensus 368 gaD~--~lmPSrfEPcGL-~ql~amryGtvpIv~~tGGLadTV~~~~~~~--~-~~~gtGf~f~----~~~~~~l~~al~ 437 (487)
T COG0297 368 GADV--ILMPSRFEPCGL-TQLYAMRYGTLPIVRETGGLADTVVDRNEWL--I-QGVGTGFLFL----QTNPDHLANALR 437 (487)
T ss_pred cCCE--EEeCCcCcCCcH-HHHHHHHcCCcceEcccCCccceecCccchh--c-cCceeEEEEe----cCCHHHHHHHHH
Confidence 5555 553 3665 5578999999999998855 32 2222 2 4448888887 339999999999
Q ss_pred HHhcCchHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHh
Q 012217 412 EMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEILL 456 (468)
Q Consensus 412 ~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~~~~~~ 456 (468)
+.+. -|+.....++...+.++..+-+-+....+.++-.+.
T Consensus 438 rA~~-----~y~~~~~~w~~~~~~~m~~d~sw~~sa~~y~~lY~~ 477 (487)
T COG0297 438 RALV-----LYRAPPLLWRKVQPNAMGADFSWDLSAKEYVELYKP 477 (487)
T ss_pred HHHH-----HhhCCHHHHHHHHHhhcccccCchhHHHHHHHHHHH
Confidence 8874 344444445555555554444444555555554444
No 281
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=25.62 E-value=4.9e+02 Score=23.33 Aligned_cols=151 Identities=11% Similarity=0.079 Sum_probs=79.8
Q ss_pred ccccCCCCceEEEeecCCcCCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhh-cCceEecccChHHh
Q 012217 262 WLDCKEPKSVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAK-EKGFVASWCPQEEV 340 (468)
Q Consensus 262 wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~p~~~i 340 (468)
||+-. .+.++.|..|.+. ...++.|.+.|..+.++ ... +.+.+.+..+ .++.......+..-
T Consensus 5 ~l~l~-~k~vLVIGgG~va-------~~ka~~Ll~~ga~V~VI-s~~--------~~~~l~~l~~~~~i~~~~~~~~~~~ 67 (202)
T PRK06718 5 MIDLS-NKRVVIVGGGKVA-------GRRAITLLKYGAHIVVI-SPE--------LTENLVKLVEEGKIRWKQKEFEPSD 67 (202)
T ss_pred EEEcC-CCEEEEECCCHHH-------HHHHHHHHHCCCeEEEE-cCC--------CCHHHHHHHhCCCEEEEecCCChhh
Confidence 34433 4568888877665 23445566677766544 322 2233332222 23334343344555
Q ss_pred hcCCCcceeeeccChhhHHHHHh----cCCcEEecCCCCCcccchh-----hheeeceeEEEEeCC-CCCcchhHHHHHH
Q 012217 341 LKHPSIGGFLTHCGWNSIVESLC----SGVPMICWPFTGDQPTNGR-----YVCNEWGVGMEINGD-DEDVIRNEVEKLV 410 (468)
Q Consensus 341 l~~~~~~~~v~hgG~~s~~eal~----~GvP~v~~P~~~DQ~~na~-----~~~~~~g~g~~~~~~-~~~~~~~~l~~av 410 (468)
+...++ +|.--+--.+.+.++ .++++-+ .|.+..+. .+ ++-++-+.+.+. ..-.-+..|++.|
T Consensus 68 l~~adl--ViaaT~d~elN~~i~~~a~~~~lvn~----~d~~~~~~f~~Pa~~-~~g~l~iaIsT~G~sP~la~~lr~~i 140 (202)
T PRK06718 68 IVDAFL--VIAATNDPRVNEQVKEDLPENALFNV----ITDAESGNVVFPSAL-HRGKLTISVSTDGASPKLAKKIRDEL 140 (202)
T ss_pred cCCceE--EEEcCCCHHHHHHHHHHHHhCCcEEE----CCCCccCeEEEeeEE-EcCCeEEEEECCCCChHHHHHHHHHH
Confidence 667776 777767666555544 4555444 35443332 33 443455555431 0122345566667
Q ss_pred HHHhcCchHHHHHHHHHHHHHHHHHHh
Q 012217 411 REMMEGEKGKQMRNKAMEWKGLAEEAA 437 (468)
Q Consensus 411 ~~~l~~~~~~~~~~~a~~l~~~~~~a~ 437 (468)
.+++ .++-..+-+...++++++++..
T Consensus 141 e~~~-~~~~~~~~~~~~~~R~~~k~~~ 166 (202)
T PRK06718 141 EALY-DESYESYIDFLYECRQKIKELQ 166 (202)
T ss_pred HHHc-chhHHHHHHHHHHHHHHHHHhC
Confidence 6666 2333467778888888877643
No 282
>PRK13010 purU formyltetrahydrofolate deformylase; Reviewed
Probab=25.62 E-value=6e+02 Score=24.36 Aligned_cols=102 Identities=13% Similarity=0.107 Sum_probs=66.5
Q ss_pred HHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHHHhcCCc
Q 012217 288 IEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVP 367 (468)
Q Consensus 288 ~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP 367 (468)
.++++.|++.+..+++..+.. ..+++.+.+..+.++ |=-||+. .=...|.+....|+.+|+.
T Consensus 159 ~~~~~~l~~~~~Dlivlagym------~il~~~~l~~~~~~i----------iNiHpSl--LP~f~G~~~~~~ai~~G~k 220 (289)
T PRK13010 159 AQILDLIETSGAELVVLARYM------QVLSDDLSRKLSGRA----------INIHHSF--LPGFKGARPYHQAHARGVK 220 (289)
T ss_pred HHHHHHHHHhCCCEEEEehhh------hhCCHHHHhhccCCc----------eeeCccc--CCCCCCCCHHHHHHHcCCC
Confidence 356777778888888888754 346677665543322 1224444 3344689999999999999
Q ss_pred EEecCCCC--CcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHH
Q 012217 368 MICWPFTG--DQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREM 413 (468)
Q Consensus 368 ~v~~P~~~--DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~ 413 (468)
..++=.+. +..+.+.-+.++ -+.+. ..-|.++|.+.+.++
T Consensus 221 ~tG~TvH~v~~~lD~GpII~Q~---~v~V~---~~dt~e~L~~r~~~~ 262 (289)
T PRK13010 221 LIGATAHFVTDDLDEGPIIEQD---VERVD---HSYSPEDLVAKGRDV 262 (289)
T ss_pred eEEEEEEEEcCCCCCCCceEEE---EEEcC---CCCCHHHHHHHHHHH
Confidence 98877743 445566555333 34444 345788888888765
No 283
>TIGR00512 salvage_mtnA S-methyl-5-thioribose-1-phosphate isomerase. The delineation of this family was based in part on a discussion and neighbor-joining phylogenetic study, by Kyrpides and Woese, of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. This clade is now recognized to include the methionine salvage pathway enzyme MtnA.
Probab=25.57 E-value=1.2e+02 Score=29.88 Aligned_cols=19 Identities=16% Similarity=0.176 Sum_probs=14.4
Q ss_pred hHHHHHHHcCCCeEEEccc
Q 012217 99 FTITAAQQLGLPIVLFFTI 117 (468)
Q Consensus 99 ~~~~vA~~lgIP~v~~~~~ 117 (468)
....+|+.+|+|+++..++
T Consensus 250 ~lA~~Ak~~~vPfyV~a~~ 268 (331)
T TIGR00512 250 QLAVLAKHHGVPFYVAAPT 268 (331)
T ss_pred HHHHHHHHhCCCEEEeccc
Confidence 3446789999999998553
No 284
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=25.51 E-value=1.1e+02 Score=29.10 Aligned_cols=36 Identities=14% Similarity=0.117 Sum_probs=29.3
Q ss_pred EEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012217 14 VCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFN 49 (468)
Q Consensus 14 l~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~ 49 (468)
++..+...|.-.....|++.|.+.||+|.+++....
T Consensus 5 i~~~~~~gG~~~~~~~l~~~l~~~~~~v~~~~~~~~ 40 (365)
T cd03807 5 VITGLDVGGAERMLVRLLKGLDRDRFEHVVISLTDR 40 (365)
T ss_pred EEeeccCccHHHHHHHHHHHhhhccceEEEEecCcc
Confidence 344445688999999999999999999999987543
No 285
>KOG0100 consensus Molecular chaperones GRP78/BiP/KAR2, HSP70 superfamily [Posttranslational modification, protein turnover, chaperones]
Probab=25.49 E-value=2.3e+02 Score=28.44 Aligned_cols=51 Identities=25% Similarity=0.380 Sum_probs=34.2
Q ss_pred hcCCcEEecCCCCCcccchhhheeeceeE----EEEeCCCCCcchhHHHHHHHHH
Q 012217 363 CSGVPMICWPFTGDQPTNGRYVCNEWGVG----MEINGDDEDVIRNEVEKLVREM 413 (468)
Q Consensus 363 ~~GvP~v~~P~~~DQ~~na~~~~~~~g~g----~~~~~~~~~~~~~~l~~av~~~ 413 (468)
-.|||+|-+-|-.|-...-..-++..|.| +.+..+.+++++|+|.+.|++.
T Consensus 498 PRGvpqIEVtFevDangiL~VsAeDKgtg~~~kitItNd~~rLt~EdIerMv~eA 552 (663)
T KOG0100|consen 498 PRGVPQIEVTFEVDANGILQVSAEDKGTGKKEKITITNDKGRLTPEDIERMVNEA 552 (663)
T ss_pred CCCCccEEEEEEEccCceEEEEeeccCCCCcceEEEecCCCCCCHHHHHHHHHHH
Confidence 35788888877667655444333444666 3333345799999999998865
No 286
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=25.23 E-value=72 Score=25.93 Aligned_cols=77 Identities=17% Similarity=0.182 Sum_probs=43.7
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCCCCCCCCCCCCcCCCC
Q 012217 12 HAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGLPASSDESPTAQDAY 91 (468)
Q Consensus 12 ~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l~~~~~~~~~~~~~~~~~~ 91 (468)
+|+=+-.+ -++.+|++|+++|++|+..--... ... .|++|+.=. -..+. ......
T Consensus 16 kVvEVGiG------~~~~VA~~L~e~g~dv~atDI~~~--~a~-----------~g~~~v~DD-itnP~---~~iY~~-- 70 (129)
T COG1255 16 KVVEVGIG------FFLDVAKRLAERGFDVLATDINEK--TAP-----------EGLRFVVDD-ITNPN---ISIYEG-- 70 (129)
T ss_pred cEEEEccc------hHHHHHHHHHHcCCcEEEEecccc--cCc-----------ccceEEEcc-CCCcc---HHHhhC--
Confidence 55555433 478999999999999877633221 110 267766421 11000 000000
Q ss_pred CCCcc---------cchHHHHHHHcCCCeEEE
Q 012217 92 SLDGF---------LPFTITAAQQLGLPIVLF 114 (468)
Q Consensus 92 ~~D~~---------~~~~~~vA~~lgIP~v~~ 114 (468)
+|.+ .....++|++.|+|++..
T Consensus 71 -A~lIYSiRpppEl~~~ildva~aVga~l~I~ 101 (129)
T COG1255 71 -ADLIYSIRPPPELQSAILDVAKAVGAPLYIK 101 (129)
T ss_pred -ccceeecCCCHHHHHHHHHHHHhhCCCEEEE
Confidence 2222 346788999999999975
No 287
>PRK13011 formyltetrahydrofolate deformylase; Reviewed
Probab=25.16 E-value=6.1e+02 Score=24.26 Aligned_cols=115 Identities=13% Similarity=0.064 Sum_probs=71.7
Q ss_pred HHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHHHhcCCc
Q 012217 288 IEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVP 367 (468)
Q Consensus 288 ~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP 367 (468)
..+++.|++.+..+++..+.. ..+++.+.+..+.++ |=-||+. .=.+.|.+.+..|+.+|+.
T Consensus 155 ~~~~~~l~~~~~Dlivlagy~------~il~~~~l~~~~~~i----------iNiHpSL--LP~~rG~~~~~~ai~~G~~ 216 (286)
T PRK13011 155 AQVLDVVEESGAELVVLARYM------QVLSPELCRKLAGRA----------INIHHSF--LPGFKGAKPYHQAYERGVK 216 (286)
T ss_pred HHHHHHHHHhCcCEEEEeChh------hhCCHHHHhhccCCe----------EEecccc--CCCCCCCcHHHHHHHCCCC
Confidence 346777777788888888754 457777766544321 1224554 4455689999999999999
Q ss_pred EEecCCCC--CcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCchHHHHHHHHHHHH
Q 012217 368 MICWPFTG--DQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWK 430 (468)
Q Consensus 368 ~v~~P~~~--DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~ 430 (468)
..++=.+. +..+-+.-+.++ .+.+. ..-|.++|.+.+.++- -. -|-+..+.+.
T Consensus 217 ~tG~TvH~v~~~~D~G~Ii~Q~---~v~I~---~~dt~~~L~~r~~~~E-~~---~~~~ai~~~~ 271 (286)
T PRK13011 217 LIGATAHYVTDDLDEGPIIEQD---VERVD---HAYSPEDLVAKGRDVE-CL---TLARAVKAHI 271 (286)
T ss_pred eEEEEEEEEcCCCcCCCcEEEE---EEEcC---CCCCHHHHHHHHHHHH-HH---HHHHHHHHHH
Confidence 88776643 444445444322 34454 3568999999887742 12 4554444443
No 288
>TIGR00745 apbA_panE 2-dehydropantoate 2-reductase. This model describes enzymes that perform as 2-dehydropantoate 2-reductase, one of four enzymes required for the de novo biosynthesis of pantothenate (vitamin B5) from Asp and 2-oxoisovalerate. Although few members of the seed alignment are characterized experimentally, nearly all from complete genomes are found in a genome-wide (but not local) context of all three other pantothenate-biosynthetic enzymes (TIGR00222, TIGR00018, TIGR00223). The gene encoding this enzyme is designated apbA in Salmonella typhimurium and panE in Escherichia coli; this protein functions as a monomer and functions in the alternative pyrimidine biosynthetic, or APB, pathway, used to synthesize the pyrimidine moiety of thiamine. Note, synthesis of the pyrimidine moiety of thiamine occurs either via the first five steps in de novo purine biosynthesis, which uses the pur gene products, or through the APB pathway. Note that this family includes both NADH and NADPH
Probab=25.15 E-value=85 Score=29.75 Aligned_cols=27 Identities=15% Similarity=0.170 Sum_probs=19.7
Q ss_pred HHHHHHHhCCCEEEEEeCCcchHHHHh
Q 012217 29 KLAKLLHHKGFHITFVNTEFNHRRLLK 55 (468)
Q Consensus 29 ~La~~L~~rGh~Vt~~t~~~~~~~~~~ 55 (468)
.+|..|++.||+||++.-....+.+.+
T Consensus 5 ~~a~~L~~~G~~V~l~~r~~~~~~i~~ 31 (293)
T TIGR00745 5 LYGAYLARAGHDVTLLARGEQLEALNQ 31 (293)
T ss_pred HHHHHHHhCCCcEEEEecHHHHHHHHH
Confidence 478889999999999987533334433
No 289
>PRK06725 acetolactate synthase 3 catalytic subunit; Validated
Probab=24.92 E-value=2.7e+02 Score=29.65 Aligned_cols=26 Identities=12% Similarity=0.383 Sum_probs=20.9
Q ss_pred ceeeeccChh------hHHHHHhcCCcEEecC
Q 012217 347 GGFLTHCGWN------SIVESLCSGVPMICWP 372 (468)
Q Consensus 347 ~~~v~hgG~~------s~~eal~~GvP~v~~P 372 (468)
+++++|.|-| .+++|...++|+|++-
T Consensus 79 gv~~~t~GpG~~N~~~gla~A~~~~~Pvl~I~ 110 (570)
T PRK06725 79 GVVFATSGPGATNLVTGLADAYMDSIPLVVIT 110 (570)
T ss_pred eEEEECCCccHHHHHHHHHHHhhcCcCEEEEe
Confidence 3488888854 5789999999999983
No 290
>PF01380 SIS: SIS domain SIS domain web page.; InterPro: IPR001347 The SIS (Sugar ISomerase) domain is a phosphosugar-binding domain [] found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars possibly by binding to the end-product of the pathway.; GO: 0005529 sugar binding, 0005975 carbohydrate metabolic process; PDB: 3TBF_C 2V4M_A 2ZJ4_A 2ZJ3_A 3FKJ_A 3ODP_A 3EUA_H 1VIV_A 1M3S_B 1TZB_A ....
Probab=24.75 E-value=2.1e+02 Score=22.99 Aligned_cols=35 Identities=6% Similarity=0.307 Sum_probs=28.7
Q ss_pred CCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHH
Q 012217 18 SPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRR 52 (468)
Q Consensus 18 ~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~ 52 (468)
+...|+...++.+++.+.++|..|..+|.......
T Consensus 60 is~sg~~~~~~~~~~~ak~~g~~vi~iT~~~~~~l 94 (131)
T PF01380_consen 60 ISYSGETRELIELLRFAKERGAPVILITSNSESPL 94 (131)
T ss_dssp EESSSTTHHHHHHHHHHHHTTSEEEEEESSTTSHH
T ss_pred eeccccchhhhhhhHHHHhcCCeEEEEeCCCCCch
Confidence 33778999999999999999999988887555443
No 291
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=24.55 E-value=1.5e+02 Score=28.75 Aligned_cols=18 Identities=17% Similarity=0.174 Sum_probs=13.9
Q ss_pred hHHHHHHHcCCCeEEEcc
Q 012217 99 FTITAAQQLGLPIVLFFT 116 (468)
Q Consensus 99 ~~~~vA~~lgIP~v~~~~ 116 (468)
....+|+.+++|++++.+
T Consensus 213 ~~A~~Ak~~~vPv~V~a~ 230 (310)
T PRK08535 213 QIALAAHEARVPFMVAAE 230 (310)
T ss_pred HHHHHHHHhCCCEEEecc
Confidence 345578999999999854
No 292
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=24.53 E-value=1.2e+02 Score=30.52 Aligned_cols=44 Identities=11% Similarity=0.063 Sum_probs=34.6
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHH
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLL 54 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~ 54 (468)
..||++.-.++.|= .-.+.+.+.|.+.|++|.++.++...+.+.
T Consensus 3 ~k~IllgiTGSiaa-~~~~~ll~~L~~~g~~V~vv~T~~A~~fv~ 46 (390)
T TIGR00521 3 NKKILLGVTGGIAA-YKTVELVRELVRQGAEVKVIMTEAAKKFIT 46 (390)
T ss_pred CCEEEEEEeCHHHH-HHHHHHHHHHHhCCCEEEEEECHhHHHHHH
Confidence 35788777776655 558999999999999999999987665554
No 293
>PRK09620 hypothetical protein; Provisional
Probab=24.48 E-value=1.3e+02 Score=27.83 Aligned_cols=20 Identities=25% Similarity=0.355 Sum_probs=17.8
Q ss_pred HHHHHHHHhCCCEEEEEeCC
Q 012217 28 LKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 28 l~La~~L~~rGh~Vt~~t~~ 47 (468)
..||++|.++|++|+++...
T Consensus 33 s~LA~~L~~~Ga~V~li~g~ 52 (229)
T PRK09620 33 RIIAEELISKGAHVIYLHGY 52 (229)
T ss_pred HHHHHHHHHCCCeEEEEeCC
Confidence 68899999999999999764
No 294
>PRK13604 luxD acyl transferase; Provisional
Probab=24.30 E-value=1.5e+02 Score=28.81 Aligned_cols=35 Identities=29% Similarity=0.456 Sum_probs=29.3
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEE
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFV 44 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~ 44 (468)
+...+++..+..++-.-+..+|+.|+++|+.|..+
T Consensus 36 ~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrf 70 (307)
T PRK13604 36 KNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRY 70 (307)
T ss_pred CCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEe
Confidence 34677778888888777999999999999998776
No 295
>PRK06457 pyruvate dehydrogenase; Provisional
Probab=24.25 E-value=5.6e+02 Score=27.03 Aligned_cols=27 Identities=22% Similarity=0.381 Sum_probs=22.2
Q ss_pred CCCcceeeeccCh------hhHHHHHhcCCcEEec
Q 012217 343 HPSIGGFLTHCGW------NSIVESLCSGVPMICW 371 (468)
Q Consensus 343 ~~~~~~~v~hgG~------~s~~eal~~GvP~v~~ 371 (468)
.+.+ +++|+|- +.+.||...++|+|++
T Consensus 64 kpgv--~~~t~GPG~~N~l~~l~~A~~~~~Pvl~i 96 (549)
T PRK06457 64 KPSA--CMGTSGPGSIHLLNGLYDAKMDHAPVIAL 96 (549)
T ss_pred CCeE--EEeCCCCchhhhHHHHHHHHhcCCCEEEE
Confidence 4555 8889884 4778999999999998
No 296
>PF02776 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; InterPro: IPR012001 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor. It has been shown [] that some of these enzymes are structurally related. This represents the N-terminal TPP binding domain of TPP enzymes.; GO: 0030976 thiamine pyrophosphate binding; PDB: 3HWX_1 3FLM_B 3HWW_A 2JLC_A 2JLA_A 2VBG_A 2VBF_B 2Q29_A 2Q27_B 2Q28_B ....
Probab=24.20 E-value=1.8e+02 Score=25.19 Aligned_cols=30 Identities=10% Similarity=0.323 Sum_probs=21.8
Q ss_pred cCCCcceeeeccCh------hhHHHHHhcCCcEEecCC
Q 012217 342 KHPSIGGFLTHCGW------NSIVESLCSGVPMICWPF 373 (468)
Q Consensus 342 ~~~~~~~~v~hgG~------~s~~eal~~GvP~v~~P~ 373 (468)
..+.+ +++|.|- +++.+|...++|+|++--
T Consensus 63 g~~~v--~~~~~GpG~~n~~~~l~~A~~~~~Pvl~i~g 98 (172)
T PF02776_consen 63 GRPGV--VIVTSGPGATNALTGLANAYADRIPVLVITG 98 (172)
T ss_dssp SSEEE--EEEETTHHHHTTHHHHHHHHHTT-EEEEEEE
T ss_pred ccceE--EEeecccchHHHHHHHhhcccceeeEEEEec
Confidence 34555 8888874 477889999999999864
No 297
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=24.12 E-value=1.1e+02 Score=29.81 Aligned_cols=33 Identities=12% Similarity=0.106 Sum_probs=27.0
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~ 47 (468)
.++|.++-.+..|- .+|..|+++||+|+++...
T Consensus 2 ~mkI~IiG~G~mG~-----~~A~~L~~~G~~V~~~~r~ 34 (341)
T PRK08229 2 MARICVLGAGSIGC-----YLGGRLAAAGADVTLIGRA 34 (341)
T ss_pred CceEEEECCCHHHH-----HHHHHHHhcCCcEEEEecH
Confidence 35899998887774 5788899999999999764
No 298
>PRK08617 acetolactate synthase; Reviewed
Probab=24.01 E-value=2.8e+02 Score=29.28 Aligned_cols=26 Identities=23% Similarity=0.378 Sum_probs=21.0
Q ss_pred ceeeeccCh------hhHHHHHhcCCcEEecC
Q 012217 347 GGFLTHCGW------NSIVESLCSGVPMICWP 372 (468)
Q Consensus 347 ~~~v~hgG~------~s~~eal~~GvP~v~~P 372 (468)
+++++|.|- +++++|-..++|+|++-
T Consensus 69 gv~~vt~GpG~~N~l~gl~~A~~~~~Pvlvis 100 (552)
T PRK08617 69 GVVLVTSGPGVSNLATGLVTATAEGDPVVAIG 100 (552)
T ss_pred EEEEECCCCcHhHhHHHHHHHhhcCCCEEEEe
Confidence 338888774 47889999999999984
No 299
>PF01695 IstB_IS21: IstB-like ATP binding protein; InterPro: IPR002611 Proteins in this entry contain an ATP/GTP binding P-loop motif. They are found associated with IS21 family insertion sequences []. Functionally they have not been characterised, but they may be involved in transposition [].; GO: 0005524 ATP binding; PDB: 3EC2_A 3ECC_A 2W58_A 2QGZ_A.
Probab=23.92 E-value=1.4e+02 Score=26.24 Aligned_cols=46 Identities=13% Similarity=0.161 Sum_probs=36.5
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHh
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLK 55 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~ 55 (468)
...++++-.++.|-..=...+++++.++|+.|.|++.+.....+..
T Consensus 47 ~~~l~l~G~~G~GKThLa~ai~~~~~~~g~~v~f~~~~~L~~~l~~ 92 (178)
T PF01695_consen 47 GENLILYGPPGTGKTHLAVAIANEAIRKGYSVLFITASDLLDELKQ 92 (178)
T ss_dssp --EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEHHHHHHHHHC
T ss_pred CeEEEEEhhHhHHHHHHHHHHHHHhccCCcceeEeecCceeccccc
Confidence 4578999999999999999999999999999999988766555544
No 300
>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase. Members of this protein family are sulfoacetaldehyde acetyltransferase, an enzyme of taurine utilization. Taurine, or 2-aminoethanesulfonate, can be used by bacteria as a source of carbon, nitrogen, and sulfur.
Probab=23.79 E-value=5.8e+02 Score=27.10 Aligned_cols=28 Identities=14% Similarity=0.237 Sum_probs=22.5
Q ss_pred CCCcceeeeccChh------hHHHHHhcCCcEEecC
Q 012217 343 HPSIGGFLTHCGWN------SIVESLCSGVPMICWP 372 (468)
Q Consensus 343 ~~~~~~~v~hgG~~------s~~eal~~GvP~v~~P 372 (468)
.+.+ +++|.|-| .+++|...++|+|++.
T Consensus 64 ~~gv--~~~t~GPG~~N~~~gla~A~~~~~Pvl~I~ 97 (579)
T TIGR03457 64 RMSM--VIGQNGPGVTNCVTAIAAAYWAHTPVVIVT 97 (579)
T ss_pred CCEE--EEECCCchHHHHHHHHHHHhhcCCCEEEEe
Confidence 4554 88888854 6779999999999995
No 301
>PF07015 VirC1: VirC1 protein; InterPro: IPR009744 This family consists of several bacterial VirC1 proteins. In Agrobacterium tumefaciens, a cis-active 24-base-pair sequence adjacent to the right border of the T-DNA, called overdrive, stimulates tumour formation by increasing the level of T-DNA processing. It is thought that the virC operon, which enhances T-DNA processing probably, does so because the VirC1 protein interacts with overdrive. It has now been shown that the virC1 gene product binds to overdrive but not to the right border of T-DNA [].
Probab=23.73 E-value=1.8e+02 Score=26.89 Aligned_cols=42 Identities=17% Similarity=0.165 Sum_probs=34.4
Q ss_pred EEEEcC-CCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHH
Q 012217 13 AVCIPS-PFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLL 54 (468)
Q Consensus 13 il~~p~-p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~ 54 (468)
|.+... |+.|-..-.+.||.+|+++|-+|+++=+..|+....
T Consensus 4 Itf~s~KGGaGKTT~~~~LAs~la~~G~~V~lIDaDpn~pl~~ 46 (231)
T PF07015_consen 4 ITFASSKGGAGKTTAAMALASELAARGARVALIDADPNQPLAK 46 (231)
T ss_pred EEEecCCCCCcHHHHHHHHHHHHHHCCCeEEEEeCCCCCcHHH
Confidence 344444 799999999999999999999999998887765443
No 302
>PRK10353 3-methyl-adenine DNA glycosylase I; Provisional
Probab=23.53 E-value=91 Score=27.79 Aligned_cols=79 Identities=9% Similarity=-0.046 Sum_probs=48.4
Q ss_pred ecCCCCCcccchhhheeeceeEEEEeC----C------CCCcchhHHH----HHHHHHhcCchHHHHHHHHHHHHHHHHH
Q 012217 370 CWPFTGDQPTNGRYVCNEWGVGMEING----D------DEDVIRNEVE----KLVREMMEGEKGKQMRNKAMEWKGLAEE 435 (468)
Q Consensus 370 ~~P~~~DQ~~na~~~~~~~g~g~~~~~----~------~~~~~~~~l~----~av~~~l~~~~~~~~~~~a~~l~~~~~~ 435 (468)
+.|...||......+.|.+-+|+.... . ...++.+.|+ +-|.++|.|+ .+-+|-+++...+.+
T Consensus 22 G~P~~dd~~LFE~L~Le~~QAGLSW~tIL~Kre~fr~aF~~Fd~~~VA~~~e~die~Ll~d~---~IIRnr~KI~Avi~N 98 (187)
T PRK10353 22 GVPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRACFHQFDPVKVAAMQEEDVERLVQDA---GIIRHRGKIQAIIGN 98 (187)
T ss_pred CCcCCCcHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHcCCCHHHHhCCCHHHHHHHhcCc---hhHHhHHHHHHHHHH
Confidence 567788998887776677777766531 0 1356666666 6677888877 444444444444333
Q ss_pred H------hCCCCchHHHHHHHH
Q 012217 436 A------AAPHGSSSLNLDKLV 451 (468)
Q Consensus 436 a------~~~gg~s~~~~~~~~ 451 (468)
| .+|+||-...+..|+
T Consensus 99 A~~~l~i~~e~gSf~~ylW~fv 120 (187)
T PRK10353 99 ARAYLQMEQNGEPFADFVWSFV 120 (187)
T ss_pred HHHHHHHHHhcCCHHHHHhhcc
Confidence 2 135777666666664
No 303
>PF02016 Peptidase_S66: LD-carboxypeptidase; InterPro: IPR003507 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This signature is found in the Escherichia coli microcin C7 self-immunity protein mccF and in muramoyltetrapeptide carboxypeptidase (3.4.17.13 from EC, LD-carboxypeptidase A). LD-carboxypeptidase A belongs to MEROPS peptidase family S66 (clan SS). The entry also contains uncharacterised proteins including hypothetical proteins from various bacteria archaea.; PDB: 1ZRS_A 1ZL0_B 2AUM_B 2AUN_B 3TLG_A 3TLC_A 3TLZ_B 3TLY_B 3TLE_A 3TLB_B ....
Probab=23.45 E-value=84 Score=30.07 Aligned_cols=76 Identities=12% Similarity=0.259 Sum_probs=50.9
Q ss_pred CCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHH
Q 012217 281 FMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVE 360 (468)
Q Consensus 281 ~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~e 360 (468)
..+.+..+++.+++.+...+.||.++++. +-.++.++++...+-.||.. ||-..-..+++-
T Consensus 45 gs~~~Ra~dL~~a~~d~~i~aI~~~rGGy-----------------g~~rlL~~ld~~~i~~~pK~--~iGySDiTaL~~ 105 (284)
T PF02016_consen 45 GSDEERAEDLNEAFADPEIDAIWCARGGY-----------------GANRLLPYLDYDAIRKNPKI--FIGYSDITALHN 105 (284)
T ss_dssp S-HHHHHHHHHHHHHSTTEEEEEES--SS------------------GGGGGGGCHHHHHHHSG-E--EEE-GGGHHHHH
T ss_pred CCHHHHHHHHHHHhcCCCCCEEEEeeccc-----------------cHHHHHhcccccccccCCCE--EEEecchHHHHH
Confidence 34467788999999999999999998652 23356677777778878776 887777777776
Q ss_pred HHh--cCCcEEecCCCC
Q 012217 361 SLC--SGVPMICWPFTG 375 (468)
Q Consensus 361 al~--~GvP~v~~P~~~ 375 (468)
+++ .|.+.+-=|+..
T Consensus 106 al~~~~g~~t~hGp~~~ 122 (284)
T PF02016_consen 106 ALYAKTGLVTFHGPMLS 122 (284)
T ss_dssp HHHHHHTBEEEES--HH
T ss_pred HHHHhCCCeEEEcchhh
Confidence 663 377777777733
No 304
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=23.42 E-value=1.5e+02 Score=28.16 Aligned_cols=39 Identities=13% Similarity=0.106 Sum_probs=33.1
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcch
Q 012217 12 HAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNH 50 (468)
Q Consensus 12 ~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~ 50 (468)
-|+++..++.|-..-...||..|++.|++|.++....++
T Consensus 74 vi~l~G~~G~GKTTt~akLA~~l~~~g~~V~li~~D~~r 112 (272)
T TIGR00064 74 VILFVGVNGVGKTTTIAKLANKLKKQGKSVLLAAGDTFR 112 (272)
T ss_pred EEEEECCCCCcHHHHHHHHHHHHHhcCCEEEEEeCCCCC
Confidence 455566679999999999999999999999999987543
No 305
>cd02032 Bchl_like This family of proteins contains bchL and chlL. Protochlorophyllide reductase catalyzes the reductive formation of chlorophyllide from protochlorophyllide during biosynthesis of chlorophylls and bacteriochlorophylls. Three genes, bchL, bchN and bchB, are involved in light-independent protochlorophyllide reduction in bacteriochlorophyll biosynthesis. In cyanobacteria, algae, and gymnosperms, three similar genes, chlL, chlN and chlB are involved in protochlorophyllide reduction during chlorophylls biosynthesis. BchL/chlL, bchN/chlN and bchB/chlB exhibit significant sequence similarity to the nifH, nifD and nifK subunits of nitrogenase, respectively. Nitrogenase catalyzes the reductive formation of ammonia from dinitrogen.
Probab=23.42 E-value=1.4e+02 Score=28.01 Aligned_cols=35 Identities=9% Similarity=-0.016 Sum_probs=31.0
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012217 12 HAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (468)
Q Consensus 12 ~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~ 46 (468)
.|+++-=++.|...-...||..|+++|++|.++=.
T Consensus 2 ~i~v~gKGGvGKTT~a~nLA~~la~~G~rvlliD~ 36 (267)
T cd02032 2 VLAVYGKGGIGKSTTSSNLSVALAKRGKKVLQIGC 36 (267)
T ss_pred EEEEecCCCCCHHHHHHHHHHHHHHCCCcEEEEec
Confidence 57777678999999999999999999999998844
No 306
>PF09140 MipZ: ATPase MipZ; InterPro: IPR015223 Cell division in bacteria is facilitated by a polymeric ring structure, the Z ring, composed of tubulin-like FtsZ protofilaments. Correct positioning of the division plane is a prerequisite for the generation of daughter cells with a normal chromosome complement. In Caulobacter crescentus MipZ, an essential protein, coordinates and regulates the assembly of the FtsZ cytokinetic ring during cell division. MipZ, forms a complex with the partitioning protein ParB near the origin of replication and localizes with the duplicated origin regions to the cell poles. MipZ also directly interferes with FtsZ polymerisation, thereby restricting FtsZ ring formation to mid-cell, the region of lowest MipZ concentration. In eukaryotes members of this entry belong to the Mrp/NBP35 ATP-binding protein family, and specifically the NUBP2/CFD1 subfamily. This includes the cytosolic Fe-S cluster assembly factor Cfd1, which is a component of the cytosolic iron-sulphur (Fe/S) protein assembly machinery. This protein is required for maturation of extra-mitochondrial Fe/S proteins. It may bind and transfer a labile 4Fe-4S cluster to target apoproteins. Cfd1 is also required for biogenesis and export of both ribosomal subunits, suggesting a role in assembly of the Fe/S clusters in RLI1, a protein which performs rRNA processing and ribosome export. ; PDB: 2XIT_B 2XJ4_A 2XJ9_A.
Probab=23.31 E-value=1.4e+02 Score=28.06 Aligned_cols=39 Identities=15% Similarity=0.230 Sum_probs=28.7
Q ss_pred EEEEEcC--CCCccHHHHHHHHHHHHhCCCEEEEEeCCcch
Q 012217 12 HAVCIPS--PFQSHIKAMLKLAKLLHHKGFHITFVNTEFNH 50 (468)
Q Consensus 12 ~il~~p~--p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~ 50 (468)
||+++.. ++.|--.--.+||-.|++.|++|-++=.....
T Consensus 1 HiIvV~sgKGGvGKSTva~~lA~aLa~~G~kVg~lD~Di~q 41 (261)
T PF09140_consen 1 HIIVVGSGKGGVGKSTVAVNLAVALARMGKKVGLLDLDIRQ 41 (261)
T ss_dssp EEEEEE-SSTTTTHHHHHHHHHHHHHCTT--EEEEE--TTT
T ss_pred CEEEEecCCCCCcHHHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 5666666 69999999999999999999999999665433
No 307
>COG3349 Uncharacterized conserved protein [Function unknown]
Probab=23.26 E-value=80 Score=32.63 Aligned_cols=31 Identities=16% Similarity=0.245 Sum_probs=23.8
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012217 12 HAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 12 ~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~ 47 (468)
||+++--+-.| |.-|.+|+++||+||++-..
T Consensus 2 rVai~GaG~Ag-----L~~a~~La~~g~~vt~~ea~ 32 (485)
T COG3349 2 RVAIAGAGLAG-----LAAAYELADAGYDVTLYEAR 32 (485)
T ss_pred eEEEEcccHHH-----HHHHHHHHhCCCceEEEecc
Confidence 66666554443 78899999999999999653
No 308
>COG2894 MinD Septum formation inhibitor-activating ATPase [Cell division and chromosome partitioning]
Probab=23.08 E-value=1.4e+02 Score=27.54 Aligned_cols=36 Identities=8% Similarity=0.182 Sum_probs=31.7
Q ss_pred EEEEEcCC--CCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012217 12 HAVCIPSP--FQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 12 ~il~~p~p--~~GHi~P~l~La~~L~~rGh~Vt~~t~~ 47 (468)
+|++++++ +.|...-.-.|+..|+.+|+.|.++-..
T Consensus 3 ~iIVvTSGKGGVGKTTttAnig~aLA~~GkKv~liD~D 40 (272)
T COG2894 3 RIIVVTSGKGGVGKTTTTANIGTALAQLGKKVVLIDFD 40 (272)
T ss_pred eEEEEecCCCCcCccchhHHHHHHHHHcCCeEEEEecC
Confidence 67777774 8999999999999999999999999654
No 309
>PF09334 tRNA-synt_1g: tRNA synthetases class I (M); InterPro: IPR015413 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This domain is found in methionyl and leucyl tRNA synthetases. ; GO: 0000166 nucleotide binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0006418 tRNA aminoacylation for protein translation, 0005737 cytoplasm; PDB: 2D5B_A 1A8H_A 1WOY_A 2D54_A 4DLP_A 2CT8_B 2CSX_A 1MED_A 1PFU_A 1PFW_A ....
Probab=23.03 E-value=72 Score=32.16 Aligned_cols=29 Identities=28% Similarity=0.417 Sum_probs=23.3
Q ss_pred CCccHHHHH---HHHHHHHhCCCEEEEEeCCc
Q 012217 20 FQSHIKAML---KLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 20 ~~GHi~P~l---~La~~L~~rGh~Vt~~t~~~ 48 (468)
=.||+.|++ .+||.+..+||+|.++|+..
T Consensus 15 HlGH~~~~l~ADv~aR~~r~~G~~v~~~tGtD 46 (391)
T PF09334_consen 15 HLGHLYPYLAADVLARYLRLRGHDVLFVTGTD 46 (391)
T ss_dssp BHHHHHHHHHHHHHHHHHHHTT-EEEEEEEEE
T ss_pred CCChhHHHHHHHHHHHHHhhcccceeeEEecc
Confidence 459999887 57888888999999999754
No 310
>PF05014 Nuc_deoxyrib_tr: Nucleoside 2-deoxyribosyltransferase; InterPro: IPR007710 Nucleoside 2-deoxyribosyltransferase (2.4.2.6 from EC) catalyses the cleavage of the glycosidic bonds of 2-deoxyribonucleosides. Nucleoside 2-deoxyribosyltransferases can be divided into two groups based on their substrate specificity: class I enzymes are specific for the transfer of deoxyribose between two purines, while class II enzymes will transfer the deoxyribose between either purines or pyrimidines. The structure of the class I [] and class II [] enzymes are very similar. In class I enzymes, the purine base shields the active site from solvent, which the smaller pyrimidine base cannot do, while in class II enzymes the active site is shielded by a loop (residues 48-62). Both classes of enzymes are found in various Lactobacillus species and participate in nucleoside recycling in these microorganisms. This entry represents both classes of enzymes.; GO: 0050144 nucleoside deoxyribosyltransferase activity, 0070694 deoxyribonucleoside 5'-monophosphate N-glycosidase activity, 0009159 deoxyribonucleoside monophosphate catabolic process; PDB: 1S2L_A 1S2D_C 1S2I_A 1S3F_B 1S2G_C 2A0K_A 2F67_A 2F64_B 2F62_A 2F2T_A ....
Probab=23.03 E-value=3.2e+02 Score=21.66 Aligned_cols=94 Identities=14% Similarity=0.093 Sum_probs=47.2
Q ss_pred EEEeecCCcCC-CHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceee
Q 012217 272 IYVNFGSFIFM-NKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFL 350 (468)
Q Consensus 272 v~vs~GS~~~~-~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v 350 (468)
||++. +.... ......++.+.|++.+..+. .+.........-.....+.. |--....+..+++-.++
T Consensus 1 IYlAg-p~F~~~~~~~~~~~~~~L~~~g~~v~---~P~~~~~~~~~~~~~~~~~i--------~~~d~~~i~~~D~via~ 68 (113)
T PF05014_consen 1 IYLAG-PFFSEEQKARVERLREALEKNGFEVY---SPQDNDENDEEDSQEWAREI--------FERDLEGIRECDIVIAN 68 (113)
T ss_dssp EEEES-GGSSHHHHHHHHHHHHHHHTTTTEEE---GGCTCSSS--TTSHHCHHHH--------HHHHHHHHHHSSEEEEE
T ss_pred CEEeC-CcCCHHHHHHHHHHHHHHHhCCCEEE---eccccccccccccchHHHHH--------HHHHHHHHHHCCEEEEE
Confidence 56653 33222 23457778899999888544 11100000000001110000 11123455566664454
Q ss_pred ecc---ChhhHHHH---HhcCCcEEecCCCCCc
Q 012217 351 THC---GWNSIVES---LCSGVPMICWPFTGDQ 377 (468)
Q Consensus 351 ~hg---G~~s~~ea---l~~GvP~v~~P~~~DQ 377 (468)
-.+ +.||..|. .+.|+|++++-.-..+
T Consensus 69 l~~~~~d~Gt~~ElG~A~algkpv~~~~~d~~~ 101 (113)
T PF05014_consen 69 LDGFRPDSGTAFELGYAYALGKPVILLTEDDRP 101 (113)
T ss_dssp ECSSS--HHHHHHHHHHHHTTSEEEEEECCCCT
T ss_pred CCCCCCCCcHHHHHHHHHHCCCEEEEEEcCCcc
Confidence 444 89999995 6789999998654433
No 311
>TIGR00173 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase. 2-oxoglutarate decarboxylase/SHCHC synthase (menD) is a thiamine pyrophosphate enzyme involved in menaquinone biosynthesis.
Probab=22.92 E-value=1.5e+02 Score=30.34 Aligned_cols=27 Identities=30% Similarity=0.557 Sum_probs=21.9
Q ss_pred CCCcceeeeccCh------hhHHHHHhcCCcEEec
Q 012217 343 HPSIGGFLTHCGW------NSIVESLCSGVPMICW 371 (468)
Q Consensus 343 ~~~~~~~v~hgG~------~s~~eal~~GvP~v~~ 371 (468)
.+.+ +++|+|- +.+++|...++|+|++
T Consensus 63 ~~gv--~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i 95 (432)
T TIGR00173 63 RPVA--VVCTSGTAVANLLPAVIEASYSGVPLIVL 95 (432)
T ss_pred CCEE--EEECCcchHhhhhHHHHHhcccCCcEEEE
Confidence 3555 8888884 4778999999999999
No 312
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=22.91 E-value=5.6e+02 Score=23.03 Aligned_cols=149 Identities=14% Similarity=0.171 Sum_probs=77.5
Q ss_pred CCceEEEeecCCcCCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHh-hcCceEecccChHHhhcCCCc
Q 012217 268 PKSVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKA-KEKGFVASWCPQEEVLKHPSI 346 (468)
Q Consensus 268 ~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~p~~~il~~~~~ 346 (468)
.+.++.|..|.+. ..-++.|.+.|..+.++-. . +.+.+.+-. ..++..+.--.+...|....+
T Consensus 9 gk~vlVvGgG~va-------~rk~~~Ll~~ga~VtVvsp-~--------~~~~l~~l~~~~~i~~~~~~~~~~dl~~~~l 72 (205)
T TIGR01470 9 GRAVLVVGGGDVA-------LRKARLLLKAGAQLRVIAE-E--------LESELTLLAEQGGITWLARCFDADILEGAFL 72 (205)
T ss_pred CCeEEEECcCHHH-------HHHHHHHHHCCCEEEEEcC-C--------CCHHHHHHHHcCCEEEEeCCCCHHHhCCcEE
Confidence 3458888877655 2234555567877665533 2 112332211 124444331122345666665
Q ss_pred ceeeeccChhhHH-----HHHhcCCcEEec--CCCCCcccchhhheeeceeEEEEeCC-CCCcchhHHHHHHHHHhcCch
Q 012217 347 GGFLTHCGWNSIV-----ESLCSGVPMICW--PFTGDQPTNGRYVCNEWGVGMEINGD-DEDVIRNEVEKLVREMMEGEK 418 (468)
Q Consensus 347 ~~~v~hgG~~s~~-----eal~~GvP~v~~--P~~~DQ~~na~~~~~~~g~g~~~~~~-~~~~~~~~l~~av~~~l~~~~ 418 (468)
+|..-|...+. +|-..|+|+-++ |-..| +.+-..+ ++-++-+.+.+. ..-.-...|++.|.+++.+.
T Consensus 73 --Vi~at~d~~ln~~i~~~a~~~~ilvn~~d~~e~~~-f~~pa~~-~~g~l~iaisT~G~sP~la~~lr~~ie~~l~~~- 147 (205)
T TIGR01470 73 --VIAATDDEELNRRVAHAARARGVPVNVVDDPELCS-FIFPSIV-DRSPVVVAISSGGAAPVLARLLRERIETLLPPS- 147 (205)
T ss_pred --EEECCCCHHHHHHHHHHHHHcCCEEEECCCcccCe-EEEeeEE-EcCCEEEEEECCCCCcHHHHHHHHHHHHhcchh-
Confidence 77777765443 344578888444 33333 2233333 443455555431 11233466777777777432
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 012217 419 GKQMRNKAMEWKGLAEEAA 437 (468)
Q Consensus 419 ~~~~~~~a~~l~~~~~~a~ 437 (468)
-..+.+...++++.+++..
T Consensus 148 ~~~~~~~~~~~R~~~k~~~ 166 (205)
T TIGR01470 148 LGDLATLAATWRDAVKKRL 166 (205)
T ss_pred HHHHHHHHHHHHHHHHhhC
Confidence 2356777777777777643
No 313
>PF03796 DnaB_C: DnaB-like helicase C terminal domain; InterPro: IPR007694 The hexameric helicase DnaB unwinds the DNA duplex at the Escherichia coli chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis. ; GO: 0003678 DNA helicase activity, 0005524 ATP binding, 0006260 DNA replication; PDB: 1Q57_E 1E0K_D 1E0J_B 1CR2_A 1CR4_A 1CR1_A 1CR0_A 1MI8_A 2R6D_B 2R6C_C ....
Probab=22.88 E-value=2.3e+02 Score=26.45 Aligned_cols=43 Identities=16% Similarity=0.219 Sum_probs=36.0
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhC-CCEEEEEeCCcchHHHH
Q 012217 12 HAVCIPSPFQSHIKAMLKLAKLLHHK-GFHITFVNTEFNHRRLL 54 (468)
Q Consensus 12 ~il~~p~p~~GHi~P~l~La~~L~~r-Gh~Vt~~t~~~~~~~~~ 54 (468)
-+++...|+.|...-++++|..++.+ |+.|.+++.+...+.+.
T Consensus 21 L~vi~a~pg~GKT~~~l~ia~~~a~~~~~~vly~SlEm~~~~l~ 64 (259)
T PF03796_consen 21 LTVIAARPGVGKTAFALQIALNAALNGGYPVLYFSLEMSEEELA 64 (259)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTTSSEEEEEESSS-HHHHH
T ss_pred EEEEEecccCCchHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHH
Confidence 56777889999999999999999998 69999999987665443
No 314
>PF04244 DPRP: Deoxyribodipyrimidine photo-lyase-related protein; InterPro: IPR007357 This family appears to be related to DNA photolyases.; PDB: 3ZXS_A.
Probab=22.88 E-value=1.2e+02 Score=27.93 Aligned_cols=25 Identities=28% Similarity=0.570 Sum_probs=20.2
Q ss_pred cHHHHHHHHHHHHhCCCEEEEEeCC
Q 012217 23 HIKAMLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 23 Hi~P~l~La~~L~~rGh~Vt~~t~~ 47 (468)
|+.-|.+.|..|.++|++|+.+...
T Consensus 47 ~~saMRhfa~~L~~~G~~V~Y~~~~ 71 (224)
T PF04244_consen 47 FFSAMRHFADELRAKGFRVHYIELD 71 (224)
T ss_dssp HHHHHHHHHHHHHHTT--EEEE-TT
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 6778999999999999999999887
No 315
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=22.85 E-value=1.4e+02 Score=26.67 Aligned_cols=39 Identities=15% Similarity=0.175 Sum_probs=31.7
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcch
Q 012217 12 HAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNH 50 (468)
Q Consensus 12 ~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~ 50 (468)
-|+++-..+.|-..-...||..++.+|.+|.+++...++
T Consensus 3 vi~lvGptGvGKTTt~aKLAa~~~~~~~~v~lis~D~~R 41 (196)
T PF00448_consen 3 VIALVGPTGVGKTTTIAKLAARLKLKGKKVALISADTYR 41 (196)
T ss_dssp EEEEEESTTSSHHHHHHHHHHHHHHTT--EEEEEESTSS
T ss_pred EEEEECCCCCchHhHHHHHHHHHhhccccceeecCCCCC
Confidence 355666679999999999999999999999999987664
No 316
>PRK08199 thiamine pyrophosphate protein; Validated
Probab=22.85 E-value=3.2e+02 Score=28.93 Aligned_cols=25 Identities=20% Similarity=0.276 Sum_probs=20.9
Q ss_pred ceeeeccCh------hhHHHHHhcCCcEEec
Q 012217 347 GGFLTHCGW------NSIVESLCSGVPMICW 371 (468)
Q Consensus 347 ~~~v~hgG~------~s~~eal~~GvP~v~~ 371 (468)
+++++|.|- +.+++|-..++|+|++
T Consensus 73 gv~~~t~GpG~~N~~~gi~~A~~~~~Pvl~i 103 (557)
T PRK08199 73 GICFVTRGPGATNASIGVHTAFQDSTPMILF 103 (557)
T ss_pred EEEEeCCCccHHHHHHHHHHHhhcCCCEEEE
Confidence 348999884 4788999999999988
No 317
>PRK06849 hypothetical protein; Provisional
Probab=22.84 E-value=1.7e+02 Score=29.29 Aligned_cols=35 Identities=23% Similarity=0.356 Sum_probs=26.7
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
+++|+++- |...--+.+++.|.++||+|.++....
T Consensus 4 ~~~VLI~G----~~~~~~l~iar~l~~~G~~Vi~~d~~~ 38 (389)
T PRK06849 4 KKTVLITG----ARAPAALELARLFHNAGHTVILADSLK 38 (389)
T ss_pred CCEEEEeC----CCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 56777763 223357899999999999999997754
No 318
>PRK07979 acetolactate synthase 3 catalytic subunit; Validated
Probab=22.81 E-value=4.7e+02 Score=27.76 Aligned_cols=27 Identities=19% Similarity=0.422 Sum_probs=21.4
Q ss_pred cceeeeccChh------hHHHHHhcCCcEEecC
Q 012217 346 IGGFLTHCGWN------SIVESLCSGVPMICWP 372 (468)
Q Consensus 346 ~~~~v~hgG~~------s~~eal~~GvP~v~~P 372 (468)
.+++++|.|-| ++++|...++|+|++-
T Consensus 68 ~gv~~~t~GPG~~n~l~gi~~A~~~~~Pvl~i~ 100 (574)
T PRK07979 68 VGVVLVTSGPGATNAITGIATAYMDSIPLVVLS 100 (574)
T ss_pred ceEEEECCCccHhhhHHHHHHHhhcCCCEEEEE
Confidence 34488888844 6789999999999983
No 319
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=22.70 E-value=3.4e+02 Score=26.91 Aligned_cols=35 Identities=23% Similarity=0.244 Sum_probs=27.4
Q ss_pred eEEEeecCCcCCCHHHHHHHHHHHHcCCCCEEEEEcC
Q 012217 271 VIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRP 307 (468)
Q Consensus 271 vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~ 307 (468)
++++++|+.....+ +..++++|.+.|+++.+....
T Consensus 3 Il~~~~p~~GHv~P--~l~la~~L~~rGh~V~~~t~~ 37 (401)
T cd03784 3 VLITTIGSRGDVQP--LVALAWALRAAGHEVRVATPP 37 (401)
T ss_pred EEEEeCCCcchHHH--HHHHHHHHHHCCCeEEEeeCH
Confidence 78889998765444 567888888899998888765
No 320
>TIGR01007 eps_fam capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes.
Probab=22.65 E-value=1.7e+02 Score=26.10 Aligned_cols=37 Identities=14% Similarity=0.328 Sum_probs=30.0
Q ss_pred cEEEEEcC--CCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012217 11 VHAVCIPS--PFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 11 ~~il~~p~--p~~GHi~P~l~La~~L~~rGh~Vt~~t~~ 47 (468)
++++.|.. ++.|-..-...||..|+++|++|.++=..
T Consensus 17 ~kvI~v~s~kgG~GKTt~a~~LA~~la~~G~rVllID~D 55 (204)
T TIGR01007 17 IKVLLITSVKPGEGKSTTSANIAVAFAQAGYKTLLIDGD 55 (204)
T ss_pred CcEEEEecCCCCCCHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 56555554 57888999999999999999999888554
No 321
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=22.60 E-value=2.4e+02 Score=27.21 Aligned_cols=55 Identities=15% Similarity=0.180 Sum_probs=39.6
Q ss_pred cCCCcceeeeccChhhHHHHHh----cCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCc
Q 012217 342 KHPSIGGFLTHCGWNSIVESLC----SGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGE 417 (468)
Q Consensus 342 ~~~~~~~~v~hgG~~s~~eal~----~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~ 417 (468)
..+++ +|+=||-||++.+.. .++|++++-. -+ +|.-- .++.+++.+++.++++++
T Consensus 67 ~~~D~--vi~lGGDGT~L~aa~~~~~~~~PilGIN~--------G~------lGFL~-----~~~~~~~~~~l~~i~~g~ 125 (296)
T PRK04539 67 QYCDL--VAVLGGDGTFLSVAREIAPRAVPIIGINQ--------GH------LGFLT-----QIPREYMTDKLLPVLEGK 125 (296)
T ss_pred cCCCE--EEEECCcHHHHHHHHHhcccCCCEEEEec--------CC------CeEee-----ccCHHHHHHHHHHHHcCC
Confidence 34666 999999999999874 3788888732 11 23222 367888999999998754
No 322
>PRK07282 acetolactate synthase catalytic subunit; Reviewed
Probab=22.51 E-value=3.5e+02 Score=28.74 Aligned_cols=26 Identities=19% Similarity=0.475 Sum_probs=21.3
Q ss_pred ceeeeccChh------hHHHHHhcCCcEEecC
Q 012217 347 GGFLTHCGWN------SIVESLCSGVPMICWP 372 (468)
Q Consensus 347 ~~~v~hgG~~------s~~eal~~GvP~v~~P 372 (468)
+++++|.|-| ++++|.+.++|+|++-
T Consensus 75 gv~~~t~GPG~~n~~~gla~A~~~~~Pvl~i~ 106 (566)
T PRK07282 75 GVAVVTSGPGATNAITGIADAMSDSVPLLVFT 106 (566)
T ss_pred eEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 3488888844 6789999999999994
No 323
>cd03115 SRP The signal recognition particle (SRP) mediates the transport to or across the plasma membrane in bacteria and the endoplasmic reticulum in eukaryotes. SRP recognizes N-terminal sighnal sequences of newly synthesized polypeptides at the ribosome. The SRP-polypeptide complex is then targeted to the membrane by an interaction between SRP and its cognated receptor (SR). In mammals, SRP consists of six protein subunits and a 7SL RNA. One of these subunits is a 54 kd protein (SRP54), which is a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 is a multidomain protein that consists of an N-terminal domain, followed by a central G (GTPase) domain and a C-terminal M domain.
Probab=22.42 E-value=2.2e+02 Score=24.46 Aligned_cols=39 Identities=18% Similarity=0.150 Sum_probs=33.9
Q ss_pred EEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchH
Q 012217 13 AVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHR 51 (468)
Q Consensus 13 il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~ 51 (468)
+++.-.|+.|-......++..|+++|.+|.++....++.
T Consensus 3 ~~~~G~~G~GKTt~~~~la~~~~~~g~~v~~i~~D~~~~ 41 (173)
T cd03115 3 ILLVGLQGVGKTTTAAKLALYLKKKGKKVLLVAADTYRP 41 (173)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEEcCCCCh
Confidence 566777899999999999999999999999998876543
No 324
>COG3140 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=22.32 E-value=2.7e+02 Score=19.19 Aligned_cols=37 Identities=16% Similarity=0.091 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHhcCCCC
Q 012217 421 QMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEILLSNKHN 461 (468)
Q Consensus 421 ~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~~~~~~~~~~~ 461 (468)
.-.+.+.++.+.+. +|=||-.++.-...+|+++++..
T Consensus 12 qQQ~AVE~Iq~lMa----eGmSsGEAIa~VA~elRe~hk~~ 48 (60)
T COG3140 12 QQQKAVERIQELMA----EGMSSGEAIALVAQELRENHKGE 48 (60)
T ss_pred HHHHHHHHHHHHHH----ccccchhHHHHHHHHHHHHhccc
Confidence 34555666666655 47788888888888888876544
No 325
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=22.28 E-value=1.1e+02 Score=29.99 Aligned_cols=44 Identities=9% Similarity=-0.002 Sum_probs=39.0
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHh
Q 012217 12 HAVCIPSPFQSHIKAMLKLAKLLHHK--GFHITFVNTEFNHRRLLK 55 (468)
Q Consensus 12 ~il~~p~p~~GHi~P~l~La~~L~~r--Gh~Vt~~t~~~~~~~~~~ 55 (468)
+|+++-..+.|++.=...+.+.|.++ +.+|++++.+.+.+.++.
T Consensus 1 rILii~~~~iGD~vl~tp~l~~Lk~~~P~a~I~~l~~~~~~~l~~~ 46 (344)
T TIGR02201 1 RILLIKLRHHGDMLLTTPVISSLKKNYPDAKIDVLLYQETIPILSE 46 (344)
T ss_pred CEEEEEeccccceeeHHHHHHHHHHHCCCCEEEEEECcChHHHHhc
Confidence 58899999999999999999999996 899999999888766554
No 326
>PRK08939 primosomal protein DnaI; Reviewed
Probab=22.24 E-value=1.4e+02 Score=28.90 Aligned_cols=47 Identities=15% Similarity=-0.029 Sum_probs=39.9
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhh
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKA 56 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~ 56 (468)
...+++.-.++.|-..=+.++|..|.++|+.|+|++.+.....+..+
T Consensus 156 ~~gl~L~G~~G~GKThLa~Aia~~l~~~g~~v~~~~~~~l~~~lk~~ 202 (306)
T PRK08939 156 VKGLYLYGDFGVGKSYLLAAIANELAKKGVSSTLLHFPEFIRELKNS 202 (306)
T ss_pred CCeEEEECCCCCCHHHHHHHHHHHHHHcCCCEEEEEHHHHHHHHHHH
Confidence 34688888899999999999999999999999999988766655544
No 327
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=22.19 E-value=1.7e+02 Score=28.06 Aligned_cols=57 Identities=16% Similarity=0.295 Sum_probs=38.5
Q ss_pred hhcCCCcceeeeccChhhHHHHHh----cCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhc
Q 012217 340 VLKHPSIGGFLTHCGWNSIVESLC----SGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMME 415 (468)
Q Consensus 340 il~~~~~~~~v~hgG~~s~~eal~----~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~ 415 (468)
+...+++ +|+-||-||+..++. .++|++++-. - .+|. +. .++.+++.+++.++++
T Consensus 61 ~~~~~Dl--vi~iGGDGT~L~aa~~~~~~~~PilGIN~--------G------~lGF-Lt----~~~~~~~~~~l~~i~~ 119 (287)
T PRK14077 61 LFKISDF--LISLGGDGTLISLCRKAAEYDKFVLGIHA--------G------HLGF-LT----DITVDEAEKFFQAFFQ 119 (287)
T ss_pred cccCCCE--EEEECCCHHHHHHHHHhcCCCCcEEEEeC--------C------Cccc-CC----cCCHHHHHHHHHHHHc
Confidence 3344666 999999999998865 3678877622 1 1232 22 4667888888888886
Q ss_pred Cc
Q 012217 416 GE 417 (468)
Q Consensus 416 ~~ 417 (468)
++
T Consensus 120 g~ 121 (287)
T PRK14077 120 GE 121 (287)
T ss_pred CC
Confidence 54
No 328
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain. Functionally, proteins in this superfamily use the energy from hydrolysis of NTP to transfer electron or ion.
Probab=22.04 E-value=2.1e+02 Score=21.10 Aligned_cols=33 Identities=15% Similarity=0.150 Sum_probs=27.8
Q ss_pred EEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEe
Q 012217 13 AVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVN 45 (468)
Q Consensus 13 il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t 45 (468)
+++...++.|-..-...|+..|++.|++|.++-
T Consensus 2 ~~~~g~~G~Gktt~~~~l~~~l~~~g~~v~~~~ 34 (99)
T cd01983 2 IVVTGKGGVGKTTLAANLAAALAKRGKRVLLID 34 (99)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCeEEEEC
Confidence 445556788999999999999999999998885
No 329
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=22.02 E-value=1.2e+02 Score=29.44 Aligned_cols=44 Identities=14% Similarity=0.196 Sum_probs=38.3
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHh
Q 012217 12 HAVCIPSPFQSHIKAMLKLAKLLHHK--GFHITFVNTEFNHRRLLK 55 (468)
Q Consensus 12 ~il~~p~p~~GHi~P~l~La~~L~~r--Gh~Vt~~t~~~~~~~~~~ 55 (468)
+|+++-..+-|++.=...+.+.|++. +.+|++++.+.+.+.++.
T Consensus 1 rILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~ 46 (334)
T TIGR02195 1 KILVIGPSWVGDMVMAQSLYRLLKKRYPQAVIDVLAPAWCRPLLER 46 (334)
T ss_pred CEEEEccchhHHHHHHHHHHHHHHHHCCCCEEEEEechhhHHHHhc
Confidence 58999999999999999999999997 999999998777665543
No 330
>PF02142 MGS: MGS-like domain This is a subfamily of this family; InterPro: IPR011607 This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. The known structures in this domain show a common phosphate binding site []. ; PDB: 4A1O_A 3ZZM_A 1ZCZ_A 1M6V_C 1CS0_C 1C30_E 1C3O_G 1BXR_A 1T36_E 1A9X_A ....
Probab=22.00 E-value=1.1e+02 Score=23.67 Aligned_cols=36 Identities=25% Similarity=0.295 Sum_probs=25.1
Q ss_pred HHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCC
Q 012217 27 MLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIP 74 (468)
Q Consensus 27 ~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l~ 74 (468)
++.+|+.|.+.||+ ++.|+...+.+... |++...+.
T Consensus 2 ~~~~a~~l~~lG~~--i~AT~gTa~~L~~~----------Gi~~~~v~ 37 (95)
T PF02142_consen 2 IVPLAKRLAELGFE--IYATEGTAKFLKEH----------GIEVTEVV 37 (95)
T ss_dssp HHHHHHHHHHTTSE--EEEEHHHHHHHHHT----------T--EEECC
T ss_pred HHHHHHHHHHCCCE--EEEChHHHHHHHHc----------CCCceeee
Confidence 57899999999966 55666677777765 88866553
No 331
>PF02780 Transketolase_C: Transketolase, C-terminal domain; InterPro: IPR005476 Transketolase 2.2.1.1 from EC (TK) catalyzes the reversible transfer of a two-carbon ketol unit from xylulose 5-phosphate to an aldose receptor, such as ribose 5-phosphate, to form sedoheptulose 7-phosphate and glyceraldehyde 3- phosphate. This enzyme, together with transaldolase, provides a link between the glycolytic and pentose-phosphate pathways. TK requires thiamine pyrophosphate as a cofactor. In most sources where TK has been purified, it is a homodimer of approximately 70 Kd subunits. TK sequences from a variety of eukaryotic and prokaryotic sources [, ] show that the enzyme has been evolutionarily conserved. In the peroxisomes of methylotrophic yeast Pichia angusta (Yeast) (Hansenula polymorpha), there is a highly related enzyme, dihydroxy-acetone synthase (DHAS) 2.2.1.3 from EC (also known as formaldehyde transketolase), which exhibits a very unusual specificity by including formaldehyde amongst its substrates. 1-deoxyxylulose-5-phosphate synthase (DXP synthase) [] is an enzyme so far found in bacteria (gene dxs) and plants (gene CLA1) which catalyzes the thiamine pyrophosphoate-dependent acyloin condensation reaction between carbon atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (dxp), a precursor in the biosynthetic pathway to isoprenoids, thiamine (vitamin B1), and pyridoxol (vitamin B6). DXP synthase is evolutionary related to TK. The N-terminal section, contains a histidine residue which appears to function in proton transfer during catalysis []. In the central section there are conserved acidic residues that are part of the active cleft and may participate in substrate-binding []. This family includes transketolase enzymes 2.2.1.1 from EC and also partially matches to 2-oxoisovalerate dehydrogenase beta subunit P37941 from SWISSPROT 1.2.4.4 from EC. Both these enzymes utilise thiamine pyrophosphate as a cofactor, suggesting there may be common aspects in their mechanism of catalysis.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1NGS_B 1TKA_A 1TRK_B 1TKB_A 1GPU_B 1AY0_B 1TKC_B 2E6K_A 3JU3_A 2R8P_B ....
Probab=21.98 E-value=1.4e+02 Score=24.25 Aligned_cols=35 Identities=14% Similarity=0.186 Sum_probs=29.5
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~ 46 (468)
...++++++++. +...++.++.|.+.|.+++++..
T Consensus 9 g~di~iia~G~~--~~~al~A~~~L~~~Gi~~~vi~~ 43 (124)
T PF02780_consen 9 GADITIIAYGSM--VEEALEAAEELEEEGIKAGVIDL 43 (124)
T ss_dssp SSSEEEEEETTH--HHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCEEEEeehHH--HHHHHHHHHHHHHcCCceeEEee
Confidence 358899999888 46679999999999999998854
No 332
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=21.81 E-value=81 Score=32.64 Aligned_cols=20 Identities=15% Similarity=0.280 Sum_probs=0.0
Q ss_pred HHHHHHHHhCCCEEEEEeCC
Q 012217 28 LKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 28 l~La~~L~~rGh~Vt~~t~~ 47 (468)
..||+++..+|++||+++++
T Consensus 286 ~alA~aa~~~GA~VtlI~Gp 305 (475)
T PRK13982 286 FAIAAAAAAAGAEVTLISGP 305 (475)
T ss_pred HHHHHHHHHCCCcEEEEeCC
No 333
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=21.79 E-value=1.6e+02 Score=29.72 Aligned_cols=44 Identities=20% Similarity=0.070 Sum_probs=35.1
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHH
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLL 54 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~ 54 (468)
..+|++.-.++. ...=...+.+.|.+.|++|.++.++.....+.
T Consensus 6 ~k~IllgvTGsi-aa~k~~~lv~~L~~~g~~V~vv~T~~A~~fi~ 49 (399)
T PRK05579 6 GKRIVLGVSGGI-AAYKALELVRRLRKAGADVRVVMTEAAKKFVT 49 (399)
T ss_pred CCeEEEEEeCHH-HHHHHHHHHHHHHhCCCEEEEEECHhHHHHHh
Confidence 458888877766 45578999999999999999999987665444
No 334
>COG0162 TyrS Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Probab=21.55 E-value=98 Score=31.24 Aligned_cols=27 Identities=15% Similarity=0.297 Sum_probs=23.2
Q ss_pred CCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012217 20 FQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 20 ~~GHi~P~l~La~~L~~rGh~Vt~~t~~ 47 (468)
--||+.|+..|. .|.+.||+|+++.+.
T Consensus 47 HlGhlv~l~kL~-~fQ~aGh~~ivLigd 73 (401)
T COG0162 47 HLGHLVPLMKLR-RFQDAGHKPIVLIGD 73 (401)
T ss_pred chhhHHHHHHHH-HHHHCCCeEEEEecc
Confidence 458999998886 799999999999873
No 335
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=21.19 E-value=1.3e+02 Score=28.85 Aligned_cols=29 Identities=14% Similarity=0.055 Sum_probs=24.8
Q ss_pred CCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 20 FQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 20 ~~GHi~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
..|--.-...|+++|.++||+|++++...
T Consensus 12 ~gG~~~~~~~l~~~L~~~g~~v~v~~~~~ 40 (366)
T cd03822 12 KCGIATFTTDLVNALSARGPDVLVVSVAA 40 (366)
T ss_pred CCcHHHHHHHHHHHhhhcCCeEEEEEeec
Confidence 46777888999999999999999998654
No 336
>TIGR03845 sulfopyru_alph sulfopyruvate decarboxylase, alpha subunit. This model represents the alpha subunit, or the N-terminal region, of sulfopyruvate decarboxylase, an enzyme of coenzyme M biosynthesis. Coenzyme M is found almost exclusively in the methanogenic archaea. However, the enzyme also occurs in Roseovarius nubinhibens ISM in a degradative pathway, where the resulting sulfoacetaldehyde is desulfonated to acetyl phosphate, then converted to acetyl-CoA (see PubMed:19581363).
Probab=21.16 E-value=3e+02 Score=23.61 Aligned_cols=25 Identities=12% Similarity=0.258 Sum_probs=19.2
Q ss_pred eeeeccChh----hHHHHH-hcCCcEEecC
Q 012217 348 GFLTHCGWN----SIVESL-CSGVPMICWP 372 (468)
Q Consensus 348 ~~v~hgG~~----s~~eal-~~GvP~v~~P 372 (468)
.++.++|.+ .+.+|. .+++|+|++=
T Consensus 62 v~~~~sG~gn~~~~l~~a~~~~~~Pvl~i~ 91 (157)
T TIGR03845 62 ILMQSSGLGNSINALASLNKTYGIPLPILA 91 (157)
T ss_pred EEEeCCcHHHHHHHHHHHHHcCCCCEEEEE
Confidence 477777754 566777 9999999985
No 337
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=21.13 E-value=3e+02 Score=23.90 Aligned_cols=64 Identities=14% Similarity=0.311 Sum_probs=42.9
Q ss_pred CcEEEecchhhccHHHHHHHhhcCCCceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEeec
Q 012217 198 ASAIIIHTFDALEQQVLNALSFMFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFG 277 (468)
Q Consensus 198 ~~~~l~nt~~~le~p~l~~~~~~~p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~G 277 (468)
....++.+.++.-......++..+|. +..+|-....-. ..+++++.+.+.+..+ .+|+|++|
T Consensus 49 ~~ifllG~~~~~~~~~~~~l~~~yP~-l~ivg~~~g~f~----------------~~~~~~i~~~I~~~~p-div~vglG 110 (172)
T PF03808_consen 49 KRIFLLGGSEEVLEKAAANLRRRYPG-LRIVGYHHGYFD----------------EEEEEAIINRINASGP-DIVFVGLG 110 (172)
T ss_pred CeEEEEeCCHHHHHHHHHHHHHHCCC-eEEEEecCCCCC----------------hhhHHHHHHHHHHcCC-CEEEEECC
Confidence 45677777776666667778888998 888886544210 0145567777776533 39999988
Q ss_pred CC
Q 012217 278 SF 279 (468)
Q Consensus 278 S~ 279 (468)
+=
T Consensus 111 ~P 112 (172)
T PF03808_consen 111 AP 112 (172)
T ss_pred CC
Confidence 63
No 338
>PF02702 KdpD: Osmosensitive K+ channel His kinase sensor domain; InterPro: IPR003852 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. Signal transducing histidine kinases are the key elements in two-component signal transduction systems, which control complex processes such as the initiation of development in microorganisms [, ]. Examples of histidine kinases are EnvZ, which plays a central role in osmoregulation [], and CheA, which plays a central role in the chemotaxis system []. Histidine kinases usually have an N-terminal ligand-binding domain and a C-terminal kinase domain, but other domains may also be present. The kinase domain is responsible for the autophosphorylation of the histidine with ATP, the phosphotransfer from the kinase to an aspartate of the response regulator, and (with bifunctional enzymes) the phosphotransfer from aspartyl phosphate back to ADP or to water []. The kinase core has a unique fold, distinct from that of the Ser/Thr/Tyr kinase superfamily. HKs can be roughly divided into two classes: orthodox and hybrid kinases [, ]. Most orthodox HKs, typified by the Escherichia coli EnvZ protein, function as periplasmic membrane receptors and have a signal peptide and transmembrane segment(s) that separate the protein into a periplasmic N-terminal sensing domain and a highly conserved cytoplasmic C-terminal kinase core. Members of this family, however, have an integral membrane sensor domain. Not all orthodox kinases are membrane bound, e.g., the nitrogen regulatory kinase NtrB (GlnL) is a soluble cytoplasmic HK []. Hybrid kinases contain multiple phosphodonor and phosphoacceptor sites and use multi-step phospho-relay schemes instead of promoting a single phosphoryl transfer. In addition to the sensor domain and kinase core, they contain a CheY-like receiver domain and a His-containing phosphotransfer (HPt) domain. This entry represents the N-terminal domain found in KdpD sensor kinase proteins, which regulate the kdpFABC operon responsible for potassium transport []. The N-terminal domain forms part of the cytoplasmic region of the protein, which may be the sensor domain responsible for sensing turgor pressure [].; GO: 0000155 two-component sensor activity, 0004673 protein histidine kinase activity, 0000160 two-component signal transduction system (phosphorelay), 0016020 membrane; PDB: 2R8R_B.
Probab=21.12 E-value=1.7e+02 Score=26.49 Aligned_cols=38 Identities=21% Similarity=0.228 Sum_probs=30.7
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~ 47 (468)
+++|.+=..|+.|-..-||+=|+.|.++|.+|.+-.-+
T Consensus 5 rLkIflG~apGVGKTy~ML~ea~~l~~~G~DVViG~ve 42 (211)
T PF02702_consen 5 RLKIFLGAAPGVGKTYAMLQEAHRLKEQGVDVVIGYVE 42 (211)
T ss_dssp -EEEEEESSTTSSHHHHHHHHHHHHHHTT--EEEEE--
T ss_pred cEEEEEecCCCCCHHHHHHHHHHHHHHCCCCEEEEEec
Confidence 67888888899999999999999999999999887654
No 339
>CHL00072 chlL photochlorophyllide reductase subunit L
Probab=21.04 E-value=1.8e+02 Score=27.93 Aligned_cols=36 Identities=6% Similarity=0.024 Sum_probs=32.0
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012217 12 HAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 12 ~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~ 47 (468)
+|++.-=++.|-..-...||..|+++|++|.++=..
T Consensus 2 ~ia~~gKGGVGKTTta~nLA~~La~~G~rVLlID~D 37 (290)
T CHL00072 2 KLAVYGKGGIGKSTTSCNISIALARRGKKVLQIGCD 37 (290)
T ss_pred eEEEECCCCCcHHHHHHHHHHHHHHCCCeEEEEecc
Confidence 577788899999999999999999999999988553
No 340
>PRK05973 replicative DNA helicase; Provisional
Probab=20.98 E-value=2.2e+02 Score=26.39 Aligned_cols=43 Identities=16% Similarity=0.094 Sum_probs=36.3
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHH
Q 012217 12 HAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLL 54 (468)
Q Consensus 12 ~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~ 54 (468)
-+++.--|+.|-..-.++++...+++|..|.+++.+...+.+.
T Consensus 66 l~LIaG~PG~GKT~lalqfa~~~a~~Ge~vlyfSlEes~~~i~ 108 (237)
T PRK05973 66 LVLLGARPGHGKTLLGLELAVEAMKSGRTGVFFTLEYTEQDVR 108 (237)
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHhcCCeEEEEEEeCCHHHHH
Confidence 5667777899999999999999999999999999887655443
No 341
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=20.92 E-value=8.4e+02 Score=24.28 Aligned_cols=102 Identities=19% Similarity=0.151 Sum_probs=57.9
Q ss_pred hhcCceEecccChHHh---hcCCCcceeeeccChh-----hHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeC
Q 012217 325 AKEKGFVASWCPQEEV---LKHPSIGGFLTHCGWN-----SIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEING 396 (468)
Q Consensus 325 ~~~~~~v~~~~p~~~i---l~~~~~~~~v~hgG~~-----s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~ 396 (468)
+++++....-+|+.++ |..+.+ =-|.=|| ++.|.+++|.=.|+---.+-..+.-.-- +.-..|.
T Consensus 335 i~~~v~F~~N~Py~~lv~lL~~a~i---Gvh~MwNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~-~G~~tGF---- 406 (465)
T KOG1387|consen 335 IPKHVQFEKNVPYEKLVELLGKATI---GVHTMWNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPW-DGETTGF---- 406 (465)
T ss_pred CccceEEEecCCHHHHHHHhcccee---ehhhhhhhhcchhHHHHHhcCceEEEeCCCCCceeeeecc-CCcccee----
Confidence 3467777777888764 444433 2344444 7899999997665542222222111000 0001121
Q ss_pred CCCCcchhHHHHHHHHHhc-Cch-HHHHHHHHHHHHHHHHHH
Q 012217 397 DDEDVIRNEVEKLVREMME-GEK-GKQMRNKAMEWKGLAEEA 436 (468)
Q Consensus 397 ~~~~~~~~~l~~av~~~l~-~~~-~~~~~~~a~~l~~~~~~a 436 (468)
-..|.++-++++-+++. |.+ ...+|++|++-..++.+.
T Consensus 407 --la~t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~ 446 (465)
T KOG1387|consen 407 --LAPTDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGEL 446 (465)
T ss_pred --ecCChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHH
Confidence 13577788888888775 332 457888888887777763
No 342
>PLN02939 transferase, transferring glycosyl groups
Probab=20.91 E-value=1.7e+02 Score=33.08 Aligned_cols=40 Identities=25% Similarity=0.356 Sum_probs=29.2
Q ss_pred CCcEEEEEcC-----C-CCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 9 SKVHAVCIPS-----P-FQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 9 ~~~~il~~p~-----p-~~GHi~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
..+||+++++ . ..|=-.-.-.|.++|++.||+|.+++|..
T Consensus 480 ~~mkILfVasE~aP~aKtGGLaDVv~sLPkAL~~~GhdV~VIlP~Y 525 (977)
T PLN02939 480 SGLHIVHIAAEMAPVAKVGGLADVVSGLGKALQKKGHLVEIVLPKY 525 (977)
T ss_pred CCCEEEEEEcccccccccccHHHHHHHHHHHHHHcCCeEEEEeCCC
Confidence 3689999863 2 22333345678899999999999999854
No 343
>COG2120 Uncharacterized proteins, LmbE homologs [Function unknown]
Probab=20.85 E-value=2e+02 Score=26.68 Aligned_cols=36 Identities=14% Similarity=0.130 Sum_probs=21.8
Q ss_pred CcEEEEE-cCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012217 10 KVHAVCI-PSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (468)
Q Consensus 10 ~~~il~~-p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~ 46 (468)
..+|+++ |.|-- =..-+-.....|+++||+|++++-
T Consensus 10 ~~~vL~v~aHPDD-e~~g~ggtla~~~~~G~~V~v~~l 46 (237)
T COG2120 10 PLRVLVVFAHPDD-EEIGCGGTLAKLAARGVEVTVVCL 46 (237)
T ss_pred CCcEEEEecCCcc-hhhccHHHHHHHHHCCCeEEEEEc
Confidence 4555544 43421 113344555677899999999875
No 344
>PLN00142 sucrose synthase
Probab=20.73 E-value=2.1e+02 Score=31.89 Aligned_cols=16 Identities=19% Similarity=0.247 Sum_probs=12.3
Q ss_pred hHHHHHHHcCCCeEEE
Q 012217 99 FTITAAQQLGLPIVLF 114 (468)
Q Consensus 99 ~~~~vA~~lgIP~v~~ 114 (468)
.+..+|+++|||.+..
T Consensus 422 vA~~La~~lgVP~v~T 437 (815)
T PLN00142 422 VASLLAHKLGVTQCTI 437 (815)
T ss_pred HHHHHHHHhCCCEEEE
Confidence 3556788999998875
No 345
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=20.70 E-value=37 Score=32.38 Aligned_cols=40 Identities=18% Similarity=0.374 Sum_probs=32.1
Q ss_pred ccChhhHH--HHHhcCCcEEecCCCCCcccchhhheeeceeE
Q 012217 352 HCGWNSIV--ESLCSGVPMICWPFTGDQPTNGRYVCNEWGVG 391 (468)
Q Consensus 352 hgG~~s~~--eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g 391 (468)
-||||+++ -|-.+||-++++=+...|..+++.-+.+.|+.
T Consensus 80 GCGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~ 121 (283)
T COG2230 80 GCGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLE 121 (283)
T ss_pred CCChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCC
Confidence 47888765 56677999999999999999998733666877
No 346
>PRK06027 purU formyltetrahydrofolate deformylase; Reviewed
Probab=20.65 E-value=6.8e+02 Score=23.94 Aligned_cols=114 Identities=10% Similarity=0.063 Sum_probs=66.1
Q ss_pred HHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHHHhcCCcE
Q 012217 289 EVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPM 368 (468)
Q Consensus 289 ~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP~ 368 (468)
++.+.|++.+..+++..+.. ..+++.+.+..+.++ |=-||+. .=...|.+.+..++.+|+..
T Consensus 156 ~~~~~l~~~~~Dlivlagy~------~il~~~~l~~~~~~i----------iNiHpSL--LP~yrG~~~~~~ai~~G~~~ 217 (286)
T PRK06027 156 RLLELIDEYQPDLVVLARYM------QILSPDFVARFPGRI----------INIHHSF--LPAFKGAKPYHQAYERGVKL 217 (286)
T ss_pred HHHHHHHHhCCCEEEEecch------hhcCHHHHhhccCCc----------eecCccc--CCCCCCCCHHHHHHHCCCCe
Confidence 35555666666777666643 335566554433211 1224443 33346888999999999998
Q ss_pred EecCCCC--CcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCchHHHHHHHHHHHH
Q 012217 369 ICWPFTG--DQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWK 430 (468)
Q Consensus 369 v~~P~~~--DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~ 430 (468)
.++=++. +..+.+..+.++ .+.+. ..-|.++|.+.+.++-. . -|-+..+.+.
T Consensus 218 tG~TiH~v~~~~D~G~Ii~Q~---~v~i~---~~dt~~~L~~ri~~~E~-~---~~~~ai~~~~ 271 (286)
T PRK06027 218 IGATAHYVTADLDEGPIIEQD---VIRVD---HRDTAEDLVRAGRDVEK-Q---VLARAVRWHL 271 (286)
T ss_pred EEEEEEEEcCCCcCCCcEEEE---EEEcC---CCCCHHHHHHHHHHHHH-H---HHHHHHHHHH
Confidence 7776633 445666655332 44454 35678888888876421 2 4555554444
No 347
>PRK08979 acetolactate synthase 3 catalytic subunit; Validated
Probab=20.36 E-value=3.9e+02 Score=28.41 Aligned_cols=27 Identities=22% Similarity=0.442 Sum_probs=21.5
Q ss_pred cceeeeccCh------hhHHHHHhcCCcEEecC
Q 012217 346 IGGFLTHCGW------NSIVESLCSGVPMICWP 372 (468)
Q Consensus 346 ~~~~v~hgG~------~s~~eal~~GvP~v~~P 372 (468)
.+++++|.|- +++++|...++|+|++-
T Consensus 68 ~gv~~~t~GpG~~n~l~gia~A~~~~~Pvl~i~ 100 (572)
T PRK08979 68 VGVVLVTSGPGATNTITGIATAYMDSIPMVVLS 100 (572)
T ss_pred CeEEEECCCchHhHHHHHHHHHhhcCCCEEEEe
Confidence 3448888884 46789999999999984
No 348
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=20.33 E-value=3.2e+02 Score=25.68 Aligned_cols=53 Identities=9% Similarity=0.291 Sum_probs=36.5
Q ss_pred CCcceeeeccChhhHHHHHh-cCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCc
Q 012217 344 PSIGGFLTHCGWNSIVESLC-SGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGE 417 (468)
Q Consensus 344 ~~~~~~v~hgG~~s~~eal~-~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~ 417 (468)
+++ +|+=||-||+..|+. .++|++++-. -+ +|.-. ..+.+++.+++.++++++
T Consensus 42 ~d~--vi~iGGDGT~L~a~~~~~~Pilgin~--------G~------lGfl~-----~~~~~~~~~~l~~~~~g~ 95 (256)
T PRK14075 42 ADL--IIVVGGDGTVLKAAKKVGTPLVGFKA--------GR------LGFLS-----SYTLEEIDRFLEDLKNWN 95 (256)
T ss_pred CCE--EEEECCcHHHHHHHHHcCCCEEEEeC--------CC------Ccccc-----ccCHHHHHHHHHHHHcCC
Confidence 455 999999999999986 5777776631 11 23221 356788888888888654
No 349
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=20.33 E-value=86 Score=31.46 Aligned_cols=38 Identities=11% Similarity=0.175 Sum_probs=27.5
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~ 47 (468)
+--|++|+.+..|+=+-+-.+|.+||++|+=|..+-+.
T Consensus 99 ~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHr 136 (379)
T PF03403_consen 99 KFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHR 136 (379)
T ss_dssp -EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---
T ss_pred CCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccC
Confidence 67899999999999999999999999999988887554
No 350
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=20.33 E-value=6e+02 Score=22.39 Aligned_cols=66 Identities=15% Similarity=0.093 Sum_probs=36.4
Q ss_pred eeeeccChhhHHH-------------HHhc--CCcEEecCC----CCCc---ccchhhheeeceeEEEEeC-------C-
Q 012217 348 GFLTHCGWNSIVE-------------SLCS--GVPMICWPF----TGDQ---PTNGRYVCNEWGVGMEING-------D- 397 (468)
Q Consensus 348 ~~v~hgG~~s~~e-------------al~~--GvP~v~~P~----~~DQ---~~na~~~~~~~g~g~~~~~-------~- 397 (468)
.+|.-|=+||+.. +++. ++|+++.|- .... ..|..++ +++|+-+.-.. +
T Consensus 81 ~vIaPaTantlakiA~GiaDnllt~~~~a~~~~~pvvi~Pamn~~m~~~p~~~~Nl~~L-~~~G~~vi~p~~g~la~~~~ 159 (182)
T PRK07313 81 FLVAPATANTIAKLAHGIADDLVTSVALALPATTPKLIAPAMNTKMYENPATQRNLKTL-KEDGVQEIEPKEGLLACGDE 159 (182)
T ss_pred EEEeeCCHhHHHHHHccccCcHHHHHHHHcCCCCCEEEEECCCHHHhcCHHHHHHHHHH-HHCCCEEECCCCCccccCCc
Confidence 4666666664432 2444 899999996 2333 3466677 45555433221 0
Q ss_pred --CCCcchhHHHHHHHHHh
Q 012217 398 --DEDVIRNEVEKLVREMM 414 (468)
Q Consensus 398 --~~~~~~~~l~~av~~~l 414 (468)
-+-.+.++|.+.|.+.+
T Consensus 160 g~g~~~~~~~i~~~v~~~~ 178 (182)
T PRK07313 160 GYGALADIETILETIENTL 178 (182)
T ss_pred cCCCCCCHHHHHHHHHHHh
Confidence 02345566666666554
No 351
>COG0467 RAD55 RecA-superfamily ATPases implicated in signal transduction [Signal transduction mechanisms]
Probab=20.29 E-value=2.2e+02 Score=26.52 Aligned_cols=45 Identities=18% Similarity=0.124 Sum_probs=38.1
Q ss_pred cEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHh
Q 012217 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLK 55 (468)
Q Consensus 11 ~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~ 55 (468)
--+++.-.|+.|...-.++++...+++|..|.++++......+.+
T Consensus 24 ~~~lI~G~pGsGKT~f~~qfl~~~~~~ge~vlyvs~~e~~~~l~~ 68 (260)
T COG0467 24 SVVLITGPPGTGKTIFALQFLYEGAREGEPVLYVSTEESPEELLE 68 (260)
T ss_pred cEEEEEcCCCCcHHHHHHHHHHHHHhcCCcEEEEEecCCHHHHHH
Confidence 367777789999999999999999999999999999866554443
No 352
>PRK13234 nifH nitrogenase reductase; Reviewed
Probab=20.22 E-value=2e+02 Score=27.59 Aligned_cols=35 Identities=11% Similarity=-0.045 Sum_probs=29.6
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012217 12 HAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (468)
Q Consensus 12 ~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~ 46 (468)
.|.++.=++.|-..-...||-.|++.|++|.++=.
T Consensus 6 ~iai~~KGGvGKTt~~~nLa~~la~~g~kVLliD~ 40 (295)
T PRK13234 6 QIAFYGKGGIGKSTTSQNTLAALVEMGQKILIVGC 40 (295)
T ss_pred EEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEec
Confidence 44455557999999999999999999999999944
No 353
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=20.09 E-value=1.7e+02 Score=24.16 Aligned_cols=37 Identities=11% Similarity=0.282 Sum_probs=27.5
Q ss_pred ceEEEeecCCcCCCHHHHHHHHHHHHcC--CCCEEEEEc
Q 012217 270 SVIYVNFGSFIFMNKQQLIEVAMGLVNS--NHPFLWIIR 306 (468)
Q Consensus 270 ~vv~vs~GS~~~~~~~~~~~~~~~l~~~--~~~~lw~~~ 306 (468)
.+|.++|||...-..+.+..+.+.+++. +..+-|.+-
T Consensus 2 aillv~fGS~~~~~~~~~~~i~~~l~~~~p~~~V~~aft 40 (127)
T cd03412 2 AILLVSFGTSYPTAEKTIDAIEDKVRAAFPDYEVRWAFT 40 (127)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 4899999999875556788888888542 456677765
No 354
>cd00861 ProRS_anticodon_short ProRS Prolyl-anticodon binding domain, short version found predominantly in bacteria. ProRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=20.06 E-value=2.1e+02 Score=21.55 Aligned_cols=34 Identities=21% Similarity=0.257 Sum_probs=26.4
Q ss_pred EEEEEcCCCC--ccHHHHHHHHHHHHhCCCEEEEEe
Q 012217 12 HAVCIPSPFQ--SHIKAMLKLAKLLHHKGFHITFVN 45 (468)
Q Consensus 12 ~il~~p~p~~--GHi~P~l~La~~L~~rGh~Vt~~t 45 (468)
.|+++|.... .+..-.+.++..|.+.|.+|.+-.
T Consensus 3 qv~i~p~~~~~~~~~~~a~~la~~Lr~~g~~v~~d~ 38 (94)
T cd00861 3 DVVIIPMNMKDEVQQELAEKLYAELQAAGVDVLLDD 38 (94)
T ss_pred EEEEEEcCCCcHHHHHHHHHHHHHHHHCCCEEEEEC
Confidence 6788887643 466778889999999999997754
Done!