Query 012217
Match_columns 468
No_of_seqs 221 out of 1765
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 05:04:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012217.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012217hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 3E-74 1E-78 583.6 35.9 406 10-455 13-453 (454)
2 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 5.8E-68 2E-72 547.0 37.1 438 10-456 8-479 (482)
3 2c1x_A UDP-glucose flavonoid 3 100.0 2.2E-64 7.6E-69 515.7 38.5 415 10-457 7-453 (456)
4 2vch_A Hydroquinone glucosyltr 100.0 1E-63 3.5E-68 514.0 39.9 416 10-456 6-469 (480)
5 2acv_A Triterpene UDP-glucosyl 100.0 3E-61 1E-65 493.8 35.8 406 10-455 9-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 4.3E-43 1.5E-47 356.2 29.4 355 8-435 10-405 (424)
7 4amg_A Snogd; transferase, pol 100.0 1.5E-41 5E-46 341.9 19.6 156 259-435 227-384 (400)
8 1iir_A Glycosyltransferase GTF 100.0 1.4E-40 4.9E-45 336.8 19.7 361 11-459 1-403 (415)
9 1rrv_A Glycosyltransferase GTF 100.0 1.1E-39 3.7E-44 330.4 15.9 359 11-458 1-403 (416)
10 3h4t_A Glycosyltransferase GTF 100.0 3.8E-37 1.3E-41 310.5 19.4 336 11-434 1-366 (404)
11 3rsc_A CALG2; TDP, enediyne, s 100.0 5.3E-36 1.8E-40 303.0 26.7 353 10-453 20-411 (415)
12 3ia7_A CALG4; glycosysltransfe 100.0 3.8E-35 1.3E-39 295.0 28.9 349 11-454 5-397 (402)
13 2iyf_A OLED, oleandomycin glyc 100.0 2.1E-35 7.2E-40 300.1 24.0 339 10-435 7-383 (430)
14 2yjn_A ERYCIII, glycosyltransf 100.0 2E-34 7E-39 293.9 23.2 346 10-456 20-435 (441)
15 2p6p_A Glycosyl transferase; X 100.0 3.4E-34 1.2E-38 286.8 22.3 311 11-435 1-363 (384)
16 4fzr_A SSFS6; structural genom 100.0 7.8E-31 2.7E-35 263.7 17.7 160 259-435 217-384 (398)
17 3oti_A CALG3; calicheamicin, T 100.0 7.9E-30 2.7E-34 256.4 21.9 156 259-435 222-381 (398)
18 3tsa_A SPNG, NDP-rhamnosyltran 100.0 5.6E-29 1.9E-33 249.4 20.7 160 260-435 209-372 (391)
19 3otg_A CALG1; calicheamicin, T 100.0 1.5E-27 5E-32 240.6 20.8 160 260-435 232-392 (412)
20 2o6l_A UDP-glucuronosyltransfe 99.9 4.6E-27 1.6E-31 207.7 13.6 162 255-434 7-169 (170)
21 3s2u_A UDP-N-acetylglucosamine 99.9 4.5E-23 1.6E-27 204.5 23.5 147 268-429 179-338 (365)
22 1f0k_A MURG, UDP-N-acetylgluco 99.7 3.5E-15 1.2E-19 147.2 22.8 166 268-457 182-357 (364)
23 2jzc_A UDP-N-acetylglucosamine 99.5 1.9E-14 6.5E-19 130.8 6.7 131 267-413 26-196 (224)
24 3hbm_A UDP-sugar hydrolase; PS 98.8 1.2E-08 4.2E-13 96.2 9.2 114 269-395 157-273 (282)
25 3okp_A GDP-mannose-dependent a 98.8 1.3E-06 4.4E-11 86.2 24.2 162 269-457 197-379 (394)
26 3c48_A Predicted glycosyltrans 98.7 1E-05 3.4E-10 81.1 28.3 170 270-458 243-429 (438)
27 2gek_A Phosphatidylinositol ma 98.5 7.5E-06 2.6E-10 81.0 21.2 140 271-430 209-364 (406)
28 2r60_A Glycosyl transferase, g 98.5 1.2E-05 4.1E-10 82.3 20.8 96 326-432 334-441 (499)
29 3fro_A GLGA glycogen synthase; 98.4 0.00019 6.4E-09 71.5 26.3 161 271-457 252-430 (439)
30 2f9f_A First mannosyl transfer 98.3 3.3E-06 1.1E-10 73.8 10.6 140 271-430 24-174 (177)
31 2jjm_A Glycosyl transferase, g 98.2 0.0017 5.9E-08 63.7 30.0 142 270-430 211-365 (394)
32 1v4v_A UDP-N-acetylglucosamine 98.1 1.2E-05 4.1E-10 78.9 11.9 128 269-417 198-335 (376)
33 1vgv_A UDP-N-acetylglucosamine 98.0 8.2E-06 2.8E-10 80.3 7.9 130 268-417 204-343 (384)
34 3ot5_A UDP-N-acetylglucosamine 97.9 1.9E-05 6.6E-10 78.6 7.3 108 327-454 282-392 (403)
35 3dzc_A UDP-N-acetylglucosamine 97.9 3.2E-05 1.1E-09 76.8 8.7 78 327-417 288-368 (396)
36 3qhp_A Type 1 capsular polysac 97.7 0.00043 1.5E-08 59.1 11.9 141 270-432 2-157 (166)
37 3beo_A UDP-N-acetylglucosamine 97.7 0.00014 4.6E-09 71.1 9.6 132 268-417 204-343 (375)
38 2iw1_A Lipopolysaccharide core 97.6 0.00084 2.9E-08 65.2 14.8 144 269-432 195-354 (374)
39 2bfw_A GLGA glycogen synthase; 97.5 0.002 6.7E-08 56.7 14.2 143 271-430 37-196 (200)
40 4hwg_A UDP-N-acetylglucosamine 97.5 8.7E-05 3E-09 73.3 5.4 128 269-417 203-343 (385)
41 2vsy_A XCC0866; transferase, g 97.4 0.0023 7.9E-08 66.2 15.5 95 327-429 434-536 (568)
42 3q3e_A HMW1C-like glycosyltran 97.4 0.00052 1.8E-08 70.8 10.2 135 270-417 441-589 (631)
43 2iuy_A Avigt4, glycosyltransfe 97.3 0.0012 4.1E-08 63.5 11.3 125 272-415 164-307 (342)
44 4gyw_A UDP-N-acetylglucosamine 97.2 0.0042 1.4E-07 66.3 15.0 97 268-372 521-629 (723)
45 2x6q_A Trehalose-synthase TRET 97.0 0.0069 2.4E-07 59.8 13.8 91 327-430 293-394 (416)
46 3rhz_A GTF3, nucleotide sugar 97.0 0.0015 5.1E-08 63.1 8.1 111 328-454 215-337 (339)
47 2xci_A KDO-transferase, 3-deox 96.9 0.0029 1E-07 62.0 9.8 98 328-434 261-364 (374)
48 3oy2_A Glycosyltransferase B73 96.6 0.016 5.4E-07 57.1 12.5 77 329-417 256-356 (413)
49 1rzu_A Glycogen synthase 1; gl 96.3 0.095 3.3E-06 52.7 16.1 129 271-417 292-444 (485)
50 2qzs_A Glycogen synthase; glyc 96.3 0.085 2.9E-06 53.1 15.7 131 270-417 292-445 (485)
51 3s28_A Sucrose synthase 1; gly 94.8 0.33 1.1E-05 52.2 14.2 93 327-430 640-749 (816)
52 3vue_A GBSS-I, granule-bound s 93.5 0.18 6.3E-06 51.6 8.6 137 269-415 326-476 (536)
53 2hy7_A Glucuronosyltransferase 93.4 0.42 1.4E-05 46.9 10.7 75 326-417 264-353 (406)
54 2x0d_A WSAF; GT4 family, trans 92.3 0.097 3.3E-06 51.8 4.3 79 327-417 295-380 (413)
55 3vue_A GBSS-I, granule-bound s 90.0 0.17 5.9E-06 51.8 3.6 44 1-47 1-52 (536)
56 1psw_A ADP-heptose LPS heptosy 87.5 2.6 8.9E-05 39.9 9.9 44 11-54 1-46 (348)
57 2iuy_A Avigt4, glycosyltransfe 83.6 1.2 4.1E-05 42.1 5.3 39 10-48 3-57 (342)
58 3tov_A Glycosyl transferase fa 83.1 1.7 5.8E-05 41.6 6.2 45 10-54 8-54 (349)
59 2x6q_A Trehalose-synthase TRET 78.2 3.1 0.00011 40.4 6.2 41 9-49 39-81 (416)
60 2iw1_A Lipopolysaccharide core 77.7 1.8 6.2E-05 41.1 4.3 37 11-47 1-40 (374)
61 2x0d_A WSAF; GT4 family, trans 76.0 1.6 5.5E-05 42.9 3.5 39 10-48 46-89 (413)
62 3nb0_A Glycogen [starch] synth 74.7 3.4 0.00012 43.1 5.5 35 338-374 513-551 (725)
63 2gt1_A Lipopolysaccharide hept 73.7 4.7 0.00016 37.8 6.0 130 268-417 177-323 (326)
64 1rzu_A Glycogen synthase 1; gl 72.8 3.3 0.00011 41.2 4.9 38 11-48 1-44 (485)
65 3zqu_A Probable aromatic acid 71.8 7.5 0.00026 34.1 6.3 46 10-56 4-49 (209)
66 2qzs_A Glycogen synthase; glyc 71.1 3.8 0.00013 40.7 4.9 38 11-48 1-44 (485)
67 1sbz_A Probable aromatic acid 64.7 11 0.00037 32.7 5.8 45 11-56 1-46 (197)
68 1uqt_A Alpha, alpha-trehalose- 64.5 28 0.00095 34.7 9.7 106 332-457 337-454 (482)
69 1mvl_A PPC decarboxylase athal 59.5 11 0.00037 33.1 4.8 42 10-53 19-60 (209)
70 3qjg_A Epidermin biosynthesis 58.7 12 0.00041 31.8 4.9 43 10-53 5-47 (175)
71 1ccw_A Protein (glutamate muta 57.7 18 0.00063 29.1 5.7 37 10-46 3-39 (137)
72 2ejb_A Probable aromatic acid 56.4 21 0.00073 30.6 6.2 43 12-55 3-45 (189)
73 2yxb_A Coenzyme B12-dependent 52.7 17 0.00059 30.2 4.9 38 9-46 17-54 (161)
74 1y80_A Predicted cobalamin bin 52.6 22 0.00077 30.8 5.9 42 10-51 88-129 (210)
75 1id1_A Putative potassium chan 51.9 8.9 0.00031 31.3 3.0 33 10-47 3-35 (153)
76 2i2x_B MTAC, methyltransferase 49.1 26 0.00091 31.6 5.9 38 9-46 122-159 (258)
77 1psw_A ADP-heptose LPS heptosy 48.2 18 0.00063 33.8 4.9 92 268-371 179-286 (348)
78 3t5t_A Putative glycosyltransf 46.8 68 0.0023 32.0 8.9 111 328-457 353-473 (496)
79 1kjn_A MTH0777; hypotethical p 46.7 19 0.00065 29.4 3.9 47 10-56 6-54 (157)
80 4b4o_A Epimerase family protei 46.5 22 0.00074 32.5 5.0 32 11-46 1-32 (298)
81 3dfz_A SIRC, precorrin-2 dehyd 45.8 1.5E+02 0.0052 25.9 12.0 152 261-436 25-186 (223)
82 2r8r_A Sensor protein; KDPD, P 45.7 28 0.00094 30.9 5.2 39 10-48 6-44 (228)
83 4e5s_A MCCFLIKE protein (BA_56 45.6 32 0.0011 32.4 6.0 73 282-373 62-136 (331)
84 3lqk_A Dipicolinate synthase s 43.2 25 0.00086 30.5 4.5 40 10-50 7-47 (201)
85 3s2u_A UDP-N-acetylglucosamine 42.8 42 0.0014 31.8 6.5 98 270-371 4-121 (365)
86 3beo_A UDP-N-acetylglucosamine 42.4 24 0.00082 33.1 4.8 39 10-49 8-48 (375)
87 3mcu_A Dipicolinate synthase, 42.1 25 0.00086 30.6 4.4 40 10-50 5-45 (207)
88 2gt1_A Lipopolysaccharide hept 41.8 26 0.00088 32.5 4.8 45 11-55 1-47 (326)
89 1g63_A Epidermin modifying enz 41.4 22 0.00074 30.3 3.8 42 11-53 3-44 (181)
90 3ezx_A MMCP 1, monomethylamine 41.2 43 0.0015 29.2 5.9 39 9-47 91-129 (215)
91 1p3y_1 MRSD protein; flavoprot 41.2 21 0.00071 30.8 3.6 43 10-53 8-50 (194)
92 3tov_A Glycosyl transferase fa 40.6 24 0.00082 33.4 4.4 96 268-371 184-286 (349)
93 1lss_A TRK system potassium up 39.9 19 0.00067 28.2 3.2 33 10-47 4-36 (140)
94 4h1h_A LMO1638 protein; MCCF-l 38.2 46 0.0016 31.2 5.9 73 282-373 62-136 (327)
95 2g1u_A Hypothetical protein TM 38.0 36 0.0012 27.6 4.6 33 10-47 19-51 (155)
96 3sr3_A Microcin immunity prote 37.3 54 0.0018 30.9 6.2 73 282-373 63-137 (336)
97 3ia7_A CALG4; glycosysltransfe 37.2 56 0.0019 30.8 6.6 34 271-306 7-40 (402)
98 2i2c_A Probable inorganic poly 37.1 27 0.00093 31.8 4.0 50 348-416 38-93 (272)
99 3nrb_A Formyltetrahydrofolate 35.9 2.1E+02 0.0073 26.0 9.9 102 288-413 155-258 (287)
100 1zl0_A Hypothetical protein PA 35.6 60 0.002 30.2 6.1 75 281-374 63-139 (311)
101 3hww_A 2-succinyl-5-enolpyruvy 35.6 2.7E+02 0.0091 28.0 11.6 28 342-371 70-103 (556)
102 1v5e_A Pyruvate oxidase; oxido 35.3 1.2E+02 0.0041 30.9 9.0 25 347-371 70-100 (590)
103 1qzu_A Hypothetical protein MD 34.9 29 0.00098 30.3 3.5 43 10-53 19-62 (206)
104 1w2w_B 5-methylthioribose-1-ph 34.3 46 0.0016 28.6 4.7 72 30-117 22-94 (191)
105 3mc3_A DSRE/DSRF-like family p 34.1 60 0.0021 25.8 5.2 29 20-48 28-56 (134)
106 2hy7_A Glucuronosyltransferase 33.8 25 0.00086 33.9 3.4 36 10-47 14-52 (406)
107 1v4v_A UDP-N-acetylglucosamine 33.2 46 0.0016 31.2 5.2 38 11-49 6-44 (376)
108 3obi_A Formyltetrahydrofolate 32.4 2.3E+02 0.0077 25.9 9.4 103 287-413 155-259 (288)
109 3hwr_A 2-dehydropantoate 2-red 32.1 47 0.0016 30.8 4.8 42 10-56 19-60 (318)
110 4g6h_A Rotenone-insensitive NA 32.1 28 0.00097 34.8 3.5 34 10-48 42-75 (502)
111 3o1l_A Formyltetrahydrofolate 32.0 2.6E+02 0.0088 25.7 9.8 106 284-413 167-274 (302)
112 2yvk_A Methylthioribose-1-phos 31.8 58 0.002 31.2 5.4 20 99-118 277-296 (374)
113 2wm1_A 2-amino-3-carboxymucona 31.8 46 0.0016 31.0 4.8 48 257-307 127-177 (336)
114 3fwz_A Inner membrane protein 31.7 32 0.0011 27.4 3.1 34 10-48 7-40 (140)
115 3lyu_A Putative hydrogenase; t 31.5 35 0.0012 27.5 3.4 36 11-49 19-54 (142)
116 2a0u_A Initiation factor 2B; S 31.0 61 0.0021 31.1 5.4 20 99-118 281-300 (383)
117 2hbv_A 2-amino-3-carboxymucona 30.6 1E+02 0.0035 28.5 7.0 47 257-307 131-180 (334)
118 3hn2_A 2-dehydropantoate 2-red 30.6 71 0.0024 29.4 5.8 41 10-56 2-42 (312)
119 3i83_A 2-dehydropantoate 2-red 30.4 65 0.0022 29.8 5.6 41 10-56 2-42 (320)
120 1q6z_A BFD, BFDC, benzoylforma 30.0 1.1E+02 0.0039 30.5 7.6 66 342-414 62-147 (528)
121 3oy2_A Glycosyltransferase B73 29.9 47 0.0016 31.6 4.6 37 11-48 1-40 (413)
122 1t9k_A Probable methylthioribo 29.5 62 0.0021 30.6 5.1 20 99-118 252-271 (347)
123 4hb9_A Similarities with proba 29.3 33 0.0011 32.6 3.4 29 11-44 2-30 (412)
124 2pk3_A GDP-6-deoxy-D-LYXO-4-he 29.0 40 0.0014 30.9 3.8 32 12-46 13-44 (321)
125 3l7i_A Teichoic acid biosynthe 28.7 1E+02 0.0035 32.3 7.3 112 333-456 605-720 (729)
126 2gk4_A Conserved hypothetical 28.5 40 0.0014 29.9 3.4 26 21-48 28-53 (232)
127 3n0v_A Formyltetrahydrofolate 28.5 3.1E+02 0.011 24.9 9.7 102 288-413 156-259 (286)
128 1vgv_A UDP-N-acetylglucosamine 28.2 54 0.0019 30.7 4.7 35 11-46 1-36 (384)
129 3irs_A Uncharacterized protein 28.2 1.9E+02 0.0064 26.1 8.2 66 282-363 135-201 (291)
130 1pno_A NAD(P) transhydrogenase 28.0 58 0.002 27.1 3.9 36 12-49 25-65 (180)
131 3ghy_A Ketopantoate reductase 27.8 50 0.0017 30.8 4.3 41 10-55 3-43 (335)
132 1u0t_A Inorganic polyphosphate 27.7 77 0.0026 29.3 5.5 32 340-373 72-107 (307)
133 3kjh_A CO dehydrogenase/acetyl 27.5 44 0.0015 29.2 3.6 38 11-48 1-38 (254)
134 1d4o_A NADP(H) transhydrogenas 27.3 60 0.0021 27.1 3.9 37 12-48 24-63 (184)
135 1xmp_A PURE, phosphoribosylami 27.1 2.7E+02 0.0093 23.1 10.5 145 269-439 11-165 (170)
136 3otg_A CALG1; calicheamicin, T 26.8 1.1E+02 0.0038 28.9 6.7 36 270-307 22-57 (412)
137 2qyt_A 2-dehydropantoate 2-red 26.2 41 0.0014 30.9 3.3 32 10-46 8-45 (317)
138 3tsa_A SPNG, NDP-rhamnosyltran 26.1 1.1E+02 0.0038 28.7 6.5 31 343-375 114-145 (391)
139 3tla_A MCCF; serine protease, 25.8 90 0.0031 29.8 5.6 74 281-373 92-167 (371)
140 1pjq_A CYSG, siroheme synthase 25.7 4.7E+02 0.016 25.4 12.4 153 262-436 7-168 (457)
141 4dzz_A Plasmid partitioning pr 25.6 83 0.0028 26.4 5.0 36 12-47 2-39 (206)
142 2fsv_C NAD(P) transhydrogenase 25.4 66 0.0023 27.4 3.9 35 12-48 48-87 (203)
143 4g65_A TRK system potassium up 25.1 23 0.00078 35.1 1.3 34 9-47 2-35 (461)
144 1vl0_A DTDP-4-dehydrorhamnose 25.1 41 0.0014 30.3 3.1 35 10-46 10-44 (292)
145 2qs7_A Uncharacterized protein 25.0 94 0.0032 25.0 4.9 40 11-50 9-48 (144)
146 1djl_A Transhydrogenase DIII; 24.7 69 0.0024 27.4 3.9 35 12-48 47-86 (207)
147 4dll_A 2-hydroxy-3-oxopropiona 24.7 79 0.0027 29.2 5.0 32 10-46 31-62 (320)
148 3lrx_A Putative hydrogenase; a 24.1 47 0.0016 27.2 2.9 36 11-49 24-59 (158)
149 2ew2_A 2-dehydropantoate 2-red 23.6 82 0.0028 28.6 4.9 32 10-46 3-34 (316)
150 1p9o_A Phosphopantothenoylcyst 23.6 44 0.0015 31.1 2.9 26 22-49 65-90 (313)
151 1t5o_A EIF2BD, translation ini 23.5 67 0.0023 30.4 4.2 20 99-118 249-268 (351)
152 3l6d_A Putative oxidoreductase 23.4 48 0.0016 30.5 3.2 32 10-46 9-40 (306)
153 3ecs_A Translation initiation 23.3 1.2E+02 0.004 28.3 5.7 19 99-117 214-232 (315)
154 3hbm_A UDP-sugar hydrolase; PS 23.1 32 0.0011 31.6 1.8 26 19-48 13-38 (282)
155 2bru_C NAD(P) transhydrogenase 23.0 66 0.0023 26.9 3.4 35 12-48 32-71 (186)
156 3bul_A Methionine synthase; tr 22.8 1.1E+02 0.0038 31.1 5.9 41 10-50 98-138 (579)
157 3llv_A Exopolyphosphatase-rela 22.7 45 0.0015 26.3 2.5 32 11-47 7-38 (141)
158 4eg0_A D-alanine--D-alanine li 22.5 1E+02 0.0035 28.3 5.3 39 10-48 13-55 (317)
159 3eag_A UDP-N-acetylmuramate:L- 22.0 83 0.0029 29.2 4.5 33 10-46 4-36 (326)
160 2iz6_A Molybdenum cofactor car 21.9 80 0.0027 26.6 3.9 101 257-374 35-140 (176)
161 2bw0_A 10-FTHFDH, 10-formyltet 21.8 2E+02 0.0069 26.8 7.2 32 10-46 22-53 (329)
162 3f67_A Putative dienelactone h 21.7 1.1E+02 0.0037 25.9 5.1 36 11-46 32-67 (241)
163 1bg6_A N-(1-D-carboxylethyl)-L 21.7 59 0.002 30.4 3.5 32 10-46 4-35 (359)
164 3gpi_A NAD-dependent epimerase 21.6 96 0.0033 27.7 4.8 31 11-46 4-34 (286)
165 3i6i_A Putative leucoanthocyan 21.5 76 0.0026 29.5 4.2 35 10-48 10-44 (346)
166 3kkj_A Amine oxidase, flavin-c 21.4 47 0.0016 28.7 2.6 28 12-44 4-31 (336)
167 3sty_A Methylketone synthase 1 21.4 93 0.0032 26.7 4.6 36 10-46 12-47 (267)
168 2vo1_A CTP synthase 1; pyrimid 21.3 1.1E+02 0.0037 27.8 4.7 41 9-49 21-64 (295)
169 2r6j_A Eugenol synthase 1; phe 21.2 89 0.003 28.5 4.6 32 12-47 13-44 (318)
170 3afo_A NADH kinase POS5; alpha 21.2 1.7E+02 0.0057 28.1 6.5 60 336-416 107-171 (388)
171 1ozh_A ALS, acetolactate synth 21.2 3.2E+02 0.011 27.4 9.2 28 342-371 72-105 (566)
172 2pzm_A Putative nucleotide sug 21.2 1.1E+02 0.0036 28.2 5.1 33 10-46 20-52 (330)
173 1y1p_A ARII, aldehyde reductas 21.0 1.5E+02 0.0053 26.9 6.3 34 10-47 11-44 (342)
174 3kcq_A Phosphoribosylglycinami 20.5 4.1E+02 0.014 22.9 8.4 102 288-413 72-175 (215)
175 3dhn_A NAD-dependent epimerase 20.4 1.1E+02 0.0037 26.1 4.7 33 11-47 5-37 (227)
176 3lou_A Formyltetrahydrofolate 20.2 4.1E+02 0.014 24.2 8.7 102 288-413 161-264 (292)
177 1jx7_A Hypothetical protein YC 20.1 1.2E+02 0.0042 22.8 4.5 30 20-49 14-45 (117)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=3e-74 Score=583.58 Aligned_cols=406 Identities=29% Similarity=0.518 Sum_probs=343.3
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCC--CEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCCCCCCCCCCCCc
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKG--FHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGLPASSDESPTA 87 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rG--h~Vt~~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l~~~~~~~~~~~~~~ 87 (468)
++||+++|+|++||++||++||+.|++|| +.|||++|+.+..++.+... ...++|+|+.+|+++|++. +..
T Consensus 13 ~~hvv~~P~p~~GHi~P~l~Lak~L~~~g~~~~vT~~~t~~~~~~~~~~~~----~~~~~i~~~~ipdglp~~~---~~~ 85 (454)
T 3hbf_A 13 LLHVAVLAFPFGTHAAPLLSLVKKIATEAPKVTFSFFCTTTTNDTLFSRSN----EFLPNIKYYNVHDGLPKGY---VSS 85 (454)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHSCSSSS----CCCTTEEEEECCCCCCTTC---CCC
T ss_pred CCEEEEEcCCcccHHHHHHHHHHHHHhCCCCEEEEEEeCHHHHHhhhcccc----cCCCCceEEecCCCCCCCc---ccc
Confidence 78999999999999999999999999999 99999999877766644311 1134799999999998762 222
Q ss_pred CCCCC--------------------------------CCcccchHHHHHHHcCCCeEEEccccHHHHHHHhhhhhhhhh-
Q 012217 88 QDAYS--------------------------------LDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEK- 134 (468)
Q Consensus 88 ~~~~~--------------------------------~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~- 134 (468)
.+... +|++++|+.++|+++|||++.||+++++.++.+++++.+...
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~ 165 (454)
T 3hbf_A 86 GNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLWTAGPHSLLTHVYTDLIREKT 165 (454)
T ss_dssp SCTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEECSCHHHHHHHHTHHHHHHTC
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEeCccHHHHHHHHhhHHHHhhc
Confidence 11100 899999999999999999999999999999988887755332
Q ss_pred CCCCccccccccccccccccccccccCCCccCccCccCcccccCCCchhHHHHHHHHHHhcccCcEEEecchhhccHHHH
Q 012217 135 GLFPVKVLADKSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEATENASKASAIIIHTFDALEQQVL 214 (468)
Q Consensus 135 g~~p~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~p~l 214 (468)
+..... . +....++||+++++.++++.++.. .....+.+++.+..+...+++++++||+++||++++
T Consensus 166 ~~~~~~---~---------~~~~~~iPg~p~~~~~dlp~~~~~-~~~~~~~~~~~~~~~~~~~~~~vl~ns~~eLE~~~~ 232 (454)
T 3hbf_A 166 GSKEVH---D---------VKSIDVLPGFPELKASDLPEGVIK-DIDVPFATMLHKMGLELPRANAVAINSFATIHPLIE 232 (454)
T ss_dssp CHHHHT---T---------SSCBCCSTTSCCBCGGGSCTTSSS-CTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHH
T ss_pred CCCccc---c---------ccccccCCCCCCcChhhCchhhcc-CCchHHHHHHHHHHHhhccCCEEEECChhHhCHHHH
Confidence 111100 0 113456899999999999987664 334456677777788888999999999999999999
Q ss_pred HHHhhcCCCceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCcCCCHHHHHHHHHHH
Q 012217 215 NALSFMFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIEVAMGL 294 (468)
Q Consensus 215 ~~~~~~~p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l 294 (468)
+++++.+|+ +++|||++..... ..+..+++|.+|||.+++++||||||||+...+.+++.+++.+|
T Consensus 233 ~~~~~~~~~-v~~vGPl~~~~~~-------------~~~~~~~~~~~wLd~~~~~~vVyvsfGS~~~~~~~~~~el~~~l 298 (454)
T 3hbf_A 233 NELNSKFKL-LLNVGPFNLTTPQ-------------RKVSDEHGCLEWLDQHENSSVVYISFGSVVTPPPHELTALAESL 298 (454)
T ss_dssp HHHHTTSSC-EEECCCHHHHSCC-------------SCCCCTTCHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHH
T ss_pred HHHHhcCCC-EEEECCccccccc-------------ccccchHHHHHHHhcCCCCceEEEecCCCCcCCHHHHHHHHHHH
Confidence 999998887 9999999864221 00123567999999998899999999999988899999999999
Q ss_pred HcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCC
Q 012217 295 VNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFT 374 (468)
Q Consensus 295 ~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~ 374 (468)
++++++|||+++... .+.+|+++.++.++|+++++|+||.+||+|+++++|||||||||++|++++|||+|+||++
T Consensus 299 ~~~~~~flw~~~~~~----~~~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~GvP~i~~P~~ 374 (454)
T 3hbf_A 299 EECGFPFIWSFRGDP----KEKLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGGVPMISRPFF 374 (454)
T ss_dssp HHHCCCEEEECCSCH----HHHSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECCCS
T ss_pred HhCCCeEEEEeCCcc----hhcCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcCCCEecCccc
Confidence 999999999998641 2347888888889999999999999999999999999999999999999999999999999
Q ss_pred CCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHH
Q 012217 375 GDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEI 454 (468)
Q Consensus 375 ~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~~~~ 454 (468)
+||+.||+++++.||+|+.+.. +.+++++|+++|+++|+|++|++||+||+++++++++++++||||+.++++|++++
T Consensus 375 ~DQ~~Na~~v~~~~g~Gv~l~~--~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~i 452 (454)
T 3hbf_A 375 GDQGLNTILTESVLEIGVGVDN--GVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSAMDFTTLIQIV 452 (454)
T ss_dssp TTHHHHHHHHHTTSCSEEECGG--GSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhhCeeEEecC--CCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHHHHHHHHHHHH
Confidence 9999999999555899999974 68999999999999999888889999999999999999999999999999999988
Q ss_pred H
Q 012217 455 L 455 (468)
Q Consensus 455 ~ 455 (468)
.
T Consensus 453 ~ 453 (454)
T 3hbf_A 453 T 453 (454)
T ss_dssp T
T ss_pred h
Confidence 5
No 2
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=5.8e-68 Score=547.03 Aligned_cols=438 Identities=50% Similarity=0.966 Sum_probs=336.2
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCCCCCCC--CCC-C-
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGLPASS--DES-P- 85 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l~~~~~~~~--~~~-~- 85 (468)
++||+++|+|++||++||++||++|++|||+|||++++.+..++.+........+.++++|+.++++++... .+. .
T Consensus 8 ~~~vl~~p~p~~GHi~P~l~La~~L~~rG~~VT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~lp~~~~~~~~~~~ 87 (482)
T 2pq6_A 8 KPHVVMIPYPVQGHINPLFKLAKLLHLRGFHITFVNTEYNHKRLLKSRGPKAFDGFTDFNFESIPDGLTPMEGDGDVSQD 87 (482)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHC------------CEEEEEECCCCC---------CC
T ss_pred CCEEEEecCccchhHHHHHHHHHHHHhCCCeEEEEeCCchhhhhccccccccccCCCceEEEECCCCCCCcccccCcchh
Confidence 689999999999999999999999999999999999998877665431111011123899999998776420 000 0
Q ss_pred ----------C--------cC---------CCCC--CCcccchHHHHHHHcCCCeEEEccccHHHHHHHhhhhhhhhhCC
Q 012217 86 ----------T--------AQ---------DAYS--LDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEKGL 136 (468)
Q Consensus 86 ----------~--------~~---------~~~~--~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~g~ 136 (468)
. .. .... +|.+++|+..+|+++|||++.++++++.....+.+++.+...++
T Consensus 88 ~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~ 167 (482)
T 2pq6_A 88 VPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNVLYFSSSACSLLNVMHFRSFVERGI 167 (482)
T ss_dssp HHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEEEEECSCHHHHHHHTTHHHHHHTTC
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEEEEecccHHHHHHHHHHHHHHhcCC
Confidence 0 00 0011 88888999999999999999999999888877766676656677
Q ss_pred CCccccccccccccccccccccccCCCccCccCccCcccccCCCchhHHHHHHHHHHhcccCcEEEecchhhccHHHHHH
Q 012217 137 FPVKVLADKSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEATENASKASAIIIHTFDALEQQVLNA 216 (468)
Q Consensus 137 ~p~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~p~l~~ 216 (468)
.|.. ......++++++..+++|+++.++..+++.++......+...+.+....+...+++++|+||+++||++++++
T Consensus 168 ~p~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~nt~~~le~~~~~~ 244 (482)
T 2pq6_A 168 IPFK---DESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRVNKDTTILLNTFNELESDVINA 244 (482)
T ss_dssp SSCS---SGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTCCTTCCEEESSCGGGGHHHHHH
T ss_pred CCCc---cccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhhccCCEEEEcChHHHhHHHHHH
Confidence 7754 2111122334445556788877777777765543222344555555666777889999999999999999999
Q ss_pred HhhcCCCceeeecccccc-ccccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCcCCCHHHHHHHHHHHH
Q 012217 217 LSFMFPHHLFTIGPLQLL-LNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIEVAMGLV 295 (468)
Q Consensus 217 ~~~~~p~~v~~VGpl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~ 295 (468)
+++.+|+ +++|||++.. ....... .......+.|..+.+|.+|||+++++++|||||||+...+.+++.+++++|+
T Consensus 245 ~~~~~~~-v~~VGPl~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~ 321 (482)
T 2pq6_A 245 LSSTIPS-IYPIGPLPSLLKQTPQIH--QLDSLDSNLWKEDTECLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLA 321 (482)
T ss_dssp HHTTCTT-EEECCCHHHHHHTSTTGG--GGCC---------CHHHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHH
T ss_pred HHHhCCc-EEEEcCCccccccccccc--ccccccccccccchHHHHHHhcCCCCceEEEecCCcccCCHHHHHHHHHHHH
Confidence 9988866 9999999863 1110000 0000001223455679999999888899999999998888888999999999
Q ss_pred cCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCC
Q 012217 296 NSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTG 375 (468)
Q Consensus 296 ~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~ 375 (468)
+++++|||+++.+...+....+|+++.++.++|+++++|+||.++|+|+++++|||||||||++|++++|||+|++|+++
T Consensus 322 ~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth~G~~s~~Eal~~GvP~i~~P~~~ 401 (482)
T 2pq6_A 322 NCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWPFFA 401 (482)
T ss_dssp HTTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCST
T ss_pred hcCCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEecCCcchHHHHHHcCCCEEecCccc
Confidence 99999999998642222223378888888899999999999999999999999999999999999999999999999999
Q ss_pred CcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHH
Q 012217 376 DQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEIL 455 (468)
Q Consensus 376 DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~~~~~ 455 (468)
||+.||+++++++|+|+.+. ..+++++|+++|+++|+|+++++||+||+++++++++++.+||+|..++++|+++++
T Consensus 402 dQ~~na~~~~~~~G~g~~l~---~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGss~~~l~~~v~~~~ 478 (482)
T 2pq6_A 402 DQPTDCRFICNEWEIGMEID---TNVKREELAKLINEVIAGDKGKKMKQKAMELKKKAEENTRPGGCSYMNLNKVIKDVL 478 (482)
T ss_dssp THHHHHHHHHHTSCCEEECC---SSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHTT
T ss_pred chHHHHHHHHHHhCEEEEEC---CCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 99999999865789999997 479999999999999998877789999999999999999999999999999999885
Q ss_pred h
Q 012217 456 L 456 (468)
Q Consensus 456 ~ 456 (468)
.
T Consensus 479 ~ 479 (482)
T 2pq6_A 479 L 479 (482)
T ss_dssp C
T ss_pred h
Confidence 4
No 3
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=2.2e-64 Score=515.70 Aligned_cols=415 Identities=28% Similarity=0.526 Sum_probs=322.6
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCC--CEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCCCCCCCCCC-CC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKG--FHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGLPASSDES-PT 86 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rG--h~Vt~~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l~~~~~~~~~~~-~~ 86 (468)
++||+++|+|++||++|+++||++|++|| +.||+++++.+..++.+...+ ...++++|+.+++++++..+.. ..
T Consensus 7 ~~hvv~~p~p~~GHi~P~l~la~~L~~rGh~v~vt~~~t~~~~~~~~~~~~~---~~~~~i~~~~i~~glp~~~~~~~~~ 83 (456)
T 2c1x_A 7 NPHVAVLAFPFSTHAAPLLAVVRRLAAAAPHAVFSFFSTSQSNASIFHDSMH---TMQCNIKSYDISDGVPEGYVFAGRP 83 (456)
T ss_dssp CCEEEEECCCSSSSHHHHHHHHHHHHHHCTTSEEEEEECHHHHHHHC----------CTTEEEEECCCCCCTTCCCCCCT
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhCCCCeEEEEEeCchhHHHhhccccc---cCCCceEEEeCCCCCCCcccccCCh
Confidence 67999999999999999999999999996 556889987665554432110 0123799999998877641000 00
Q ss_pred c------------------C--------CCCC--CCcccchHHHHHHHcCCCeEEEccccHHHHHHHhhhhhhhhh-CCC
Q 012217 87 A------------------Q--------DAYS--LDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEK-GLF 137 (468)
Q Consensus 87 ~------------------~--------~~~~--~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~-g~~ 137 (468)
. . .... +|.+++|+..+|+++|||++.+++++++.++.+.+.+.+... ++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (456)
T 2c1x_A 84 QEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWTAGPNSLSTHVYIDEIREKIGVS 163 (456)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEECSCHHHHHHHHTHHHHHHHHCSS
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeCccHHHHHHHhhhHHHHhccCCc
Confidence 0 0 0000 888889999999999999999999998877766554433221 221
Q ss_pred CccccccccccccccccccccccCCCccCccCccCcccccCCCchhHHHHHHHHHHhcccCcEEEecchhhccHHHHHHH
Q 012217 138 PVKVLADKSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEATENASKASAIIIHTFDALEQQVLNAL 217 (468)
Q Consensus 138 p~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~p~l~~~ 217 (468)
+... . .+.....+||+++++.++++..+........+...+.+..+...+++++++||+++||+++++.+
T Consensus 164 ~~~~--~--------~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~~~le~~~~~~~ 233 (456)
T 2c1x_A 164 GIQG--R--------EDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFINSFEELDDSLTNDL 233 (456)
T ss_dssp CCTT--C--------TTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSCGGGCHHHHHHH
T ss_pred cccc--c--------cccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEECChHHHhHHHHHHH
Confidence 1100 0 00123357888877777777544322222334444555556667889999999999999999999
Q ss_pred hhcCCCceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCcCCCHHHHHHHHHHHHcC
Q 012217 218 SFMFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIEVAMGLVNS 297 (468)
Q Consensus 218 ~~~~p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~ 297 (468)
++.+|+ +++|||++..... . + +..+.+|.+|||.++++++|||||||+...+.+++.+++++|+++
T Consensus 234 ~~~~~~-~~~vGpl~~~~~~---------~---~-~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~ 299 (456)
T 2c1x_A 234 KSKLKT-YLNIGPFNLITPP---------P---V-VPNTTGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEAS 299 (456)
T ss_dssp HHHSSC-EEECCCHHHHC----------------------CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHH
T ss_pred HhcCCC-EEEecCcccCccc---------c---c-ccchhhHHHHHhcCCCcceEEEecCccccCCHHHHHHHHHHHHhc
Confidence 988876 9999999864211 0 0 123457999999988889999999999888888999999999999
Q ss_pred CCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCCCc
Q 012217 298 NHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQ 377 (468)
Q Consensus 298 ~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ 377 (468)
+.+|||+++... .+.+|+++.++.++|+++++|+||.++|+|+++++|||||||||++|++++|||+|++|+++||
T Consensus 300 ~~~~lw~~~~~~----~~~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal~~GvP~i~~P~~~dQ 375 (456)
T 2c1x_A 300 RVPFIWSLRDKA----RVHLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESVAGGVPLICRPFFGDQ 375 (456)
T ss_dssp TCCEEEECCGGG----GGGSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTH
T ss_pred CCeEEEEECCcc----hhhCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHHHhCceEEecCChhhH
Confidence 999999998641 2347778888888999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHhc
Q 012217 378 PTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEILLS 457 (468)
Q Consensus 378 ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~~~~~~~ 457 (468)
+.||+++++.||+|+.+.. +.+++++|+++|+++|+|+++++||+||+++++++++++++||||..++++|++.+++.
T Consensus 376 ~~Na~~l~~~~g~g~~l~~--~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~~~l~~~v~~~~~~ 453 (456)
T 2c1x_A 376 RLNGRMVEDVLEIGVRIEG--GVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKGSSTENFITLVDLVSKP 453 (456)
T ss_dssp HHHHHHHHHTSCCEEECGG--GSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTCHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHhCeEEEecC--CCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHhc
Confidence 9999999666799999974 67999999999999999887889999999999999999999999999999999998653
No 4
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=1e-63 Score=514.04 Aligned_cols=416 Identities=31% Similarity=0.480 Sum_probs=319.8
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhC-CCEEEEEeCCcc--hHHHHhhhcCCCCCCCCCeeEEeCCCCC-CCCCCCCC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHK-GFHITFVNTEFN--HRRLLKARGQHSLDGLPSFRFEAIPDGL-PASSDESP 85 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~r-Gh~Vt~~t~~~~--~~~~~~~~~~~~~~~~~gi~f~~l~~~~-~~~~~~~~ 85 (468)
++||+++|+|++||++||++||++|++| ||+|||++++.+ ...+.+.... ..++++|+.++++. +.......
T Consensus 6 ~~~vl~~p~p~~GHv~P~l~La~~L~~r~Gh~Vt~~t~~~~~~~~~~~~~~~~----~~~~i~~~~l~~~~~~~~~~~~~ 81 (480)
T 2vch_A 6 TPHVAIIPSPGMGHLIPLVEFAKRLVHLHGLTVTFVIAGEGPPSKAQRTVLDS----LPSSISSVFLPPVDLTDLSSSTR 81 (480)
T ss_dssp CCEEEEECCSCHHHHHHHHHHHHHHHHHHCCEEEEEECCSSSCC-CHHHHHC-----CCTTEEEEECCCCCCTTSCTTCC
T ss_pred CcEEEEecCcchhHHHHHHHHHHHHHhCCCCEEEEEECCCcchhhhhhhhccc----cCCCceEEEcCCCCCCCCCCchh
Confidence 5799999999999999999999999998 999999999873 4444432100 01389999998642 11100000
Q ss_pred ---------------------C---cCCC-CC--CCcccchHHHHHHHcCCCeEEEccccHHHHHHHhhhhhhhhhCCCC
Q 012217 86 ---------------------T---AQDA-YS--LDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEKGLFP 138 (468)
Q Consensus 86 ---------------------~---~~~~-~~--~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~g~~p 138 (468)
. .... .. +|.+++|+..+|+++|||++.+++++++..+.+++++.+...+..+
T Consensus 82 ~~~~~~~~~~~~~~~l~~ll~~~~~~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (480)
T 2vch_A 82 IESRISLTVTRSNPELRKVFDSFVEGGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYPTTANVLSFFLHLPKLDETVSCE 161 (480)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHTTCCCSEEEECTTCGGGHHHHHHTTCCEEEEECSCHHHHHHHHHHHHHHHHCCSC
T ss_pred HHHHHHHHHHhhhHHHHHHHHHhccCCCCCeEEEECCcchhHHHHHHHcCCCEEEEECccHHHHHHHHHHHHHHhcCCCc
Confidence 0 0011 11 6778889999999999999999999998888877777554333333
Q ss_pred ccccccccccccccccccccccCCCccCccCccCcccccCCCchhHHHHHHHHHHhcccCcEEEecchhhccHHHHHHHh
Q 012217 139 VKVLADKSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEATENASKASAIIIHTFDALEQQVLNALS 218 (468)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~p~l~~~~ 218 (468)
+. +.. ....+|++++++..+++..+..+ .......+........+.+++++||+.+||++++..++
T Consensus 162 ~~---~~~---------~~~~~Pg~~p~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~nt~~ele~~~~~~l~ 227 (480)
T 2vch_A 162 FR---ELT---------EPLMLPGCVPVAGKDFLDPAQDR--KDDAYKWLLHNTKRYKEAEGILVNTFFELEPNAIKALQ 227 (480)
T ss_dssp GG---GCS---------SCBCCTTCCCBCGGGSCGGGSCT--TSHHHHHHHHHHHHGGGCSEEEESCCTTTSHHHHHHHH
T ss_pred cc---ccC---------CcccCCCCCCCChHHCchhhhcC--CchHHHHHHHHHHhcccCCEEEEcCHHHHhHHHHHHHH
Confidence 22 100 22346777776666666554322 12233444445556677889999999999999888776
Q ss_pred h---cCCCceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCcCCCHHHHHHHHHHHH
Q 012217 219 F---MFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIEVAMGLV 295 (468)
Q Consensus 219 ~---~~p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~ 295 (468)
. .+|+ +++|||++..... . +.+..+++|.+|||+++++++|||||||+...+.+++.+++++|+
T Consensus 228 ~~~~~~~~-v~~vGpl~~~~~~---------~---~~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~ 294 (480)
T 2vch_A 228 EPGLDKPP-VYPVGPLVNIGKQ---------E---AKQTEESECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLA 294 (480)
T ss_dssp SCCTTCCC-EEECCCCCCCSCS---------C---C-----CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHH
T ss_pred hcccCCCc-EEEEecccccccc---------c---cCccchhHHHHHhcCCCCCceEEEecccccCCCHHHHHHHHHHHH
Confidence 4 2455 9999999864211 0 001245679999999888899999999999888999999999999
Q ss_pred cCCCCEEEEEcCCCCCC-----------C-CCCCchhHHHHhhcCceEec-ccChHHhhcCCCcceeeeccChhhHHHHH
Q 012217 296 NSNHPFLWIIRPDLVTG-----------E-TADLPAEFEVKAKEKGFVAS-WCPQEEVLKHPSIGGFLTHCGWNSIVESL 362 (468)
Q Consensus 296 ~~~~~~lw~~~~~~~~~-----------~-~~~~~~~~~~~~~~~~~v~~-~~p~~~il~~~~~~~~v~hgG~~s~~eal 362 (468)
+++++|||+++.....+ . .+.+|+++.+++.++++++. |+||.+||+|+++++|||||||||++||+
T Consensus 295 ~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvtHgG~~S~~Eal 374 (480)
T 2vch_A 295 DSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLTHCGWNSTLESV 374 (480)
T ss_dssp HTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEECCCHHHHHHHH
T ss_pred hcCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEecccchhHHHHH
Confidence 99999999998653211 1 13578889888888888886 99999999999999999999999999999
Q ss_pred hcCCcEEecCCCCCcccchhhheeeceeEEEEeCC-CCCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCCC
Q 012217 363 CSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGD-DEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHG 441 (468)
Q Consensus 363 ~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~-~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg 441 (468)
++|||+|+||+++||+.||+++++++|+|+.+... ++.+++++|+++|+++|+++++++||+||+++++++++++.+||
T Consensus 375 ~~GvP~i~~P~~~DQ~~na~~l~~~~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l~~~~~~a~~~gG 454 (480)
T 2vch_A 375 VSGIPLIAWPLYAEQKMNAVLLSEDIRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKELKEAACRVLKDDG 454 (480)
T ss_dssp HHTCCEEECCCSTTHHHHHHHHHHTTCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHHHHHHHHHTSTTS
T ss_pred HcCCCEEeccccccchHHHHHHHHHhCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999976789999999741 12699999999999999866666999999999999999999999
Q ss_pred chHHHHHHHHHHHHh
Q 012217 442 SSSLNLDKLVNEILL 456 (468)
Q Consensus 442 ~s~~~~~~~~~~~~~ 456 (468)
+|..++++|++.+++
T Consensus 455 ss~~~~~~~v~~~~~ 469 (480)
T 2vch_A 455 TSTKALSLVALKWKA 469 (480)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH
Confidence 999999999999876
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=3e-61 Score=493.81 Aligned_cols=406 Identities=29% Similarity=0.479 Sum_probs=315.0
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhC--CCEEEEEeCCcch-----HHHHhhhcCCCCCCCCCeeEEeCCCC-CCCCC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHK--GFHITFVNTEFNH-----RRLLKARGQHSLDGLPSFRFEAIPDG-LPASS 81 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~r--Gh~Vt~~t~~~~~-----~~~~~~~~~~~~~~~~gi~f~~l~~~-~~~~~ 81 (468)
++||+++|+|++||++||++||++|++| ||+|||++++.+. +.+.+... ..++++|+.++++ ++...
T Consensus 9 ~~~vv~~p~p~~GHi~P~l~La~~L~~r~pG~~Vt~v~t~~~~~~~~~~~~~~~~~-----~~~~i~~~~lp~~~~~~~~ 83 (463)
T 2acv_A 9 NSELIFIPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLA-----SQPQIQLIDLPEVEPPPQE 83 (463)
T ss_dssp CEEEEEECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHC-----SCTTEEEEECCCCCCCCGG
T ss_pred CCEEEEEcCcccchHHHHHHHHHHHHhcCCCcEEEEEEcCCcchhhhhhhhhhccc-----CCCCceEEECCCCCCCccc
Confidence 6899999999999999999999999999 9999999998753 22332110 1138999999975 33210
Q ss_pred CCCCCc-------------------CCC--CC-----CCcccchHHHHHHHcCCCeEEEccccHHHHHHHhhhhhhhhhC
Q 012217 82 DESPTA-------------------QDA--YS-----LDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEKG 135 (468)
Q Consensus 82 ~~~~~~-------------------~~~--~~-----~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~g 135 (468)
..... ..+ .. +|.+++|+..+|+++|||++++++++++.++.+++++.+...
T Consensus 84 -~~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~~~~~~~~~~~~~~~~~~~- 161 (463)
T 2acv_A 84 -LLKSPEFYILTFLESLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIE- 161 (463)
T ss_dssp -GGGSHHHHHHHHHHHTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTT-
T ss_pred -ccCCccHHHHHHHHhhhHHHHHHHHhccCCCCeEEEECCcchhHHHHHHHcCCCEEEEeCchHHHHHHHHHHHhhccc-
Confidence 00000 000 01 888889999999999999999999999888877776643211
Q ss_pred CCCcccccccccccccccccc---ccccCCC-ccCccCccCcccccCCCchhHHHHHHHHHHhcccCcEEEecchhhccH
Q 012217 136 LFPVKVLADKSCLTKEYLNSL---IDWIPGM-KDIRIRDLPSFIQSTDPKDMMFNLCVEATENASKASAIIIHTFDALEQ 211 (468)
Q Consensus 136 ~~p~~~~~~~~~~~~~~~~~~---~~~~pg~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~ 211 (468)
.++. ... . ...+||+ ++++..+++..+..+ ......+.........++++++||+++||+
T Consensus 162 -~~~~---~~~---------~~~~~~~~pg~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~nt~~ele~ 225 (463)
T 2acv_A 162 -EVFD---DSD---------RDHQLLNIPGISNQVPSNVLPDACFNK---DGGYIAYYKLAERFRDTKGIIVNTFSDLEQ 225 (463)
T ss_dssp -CCCC---CSS---------GGGCEECCTTCSSCEEGGGSCHHHHCT---TTHHHHHHHHHHHHTTSSEEEESCCHHHHH
T ss_pred -CCCC---Ccc---------ccCceeECCCCCCCCChHHCchhhcCC---chHHHHHHHHHHhcccCCEEEECCHHHHhH
Confidence 1111 000 1 3457887 666666666444322 123344444555667788999999999999
Q ss_pred HHHHHHhhcC--CCceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCc-CCCHHHHH
Q 012217 212 QVLNALSFMF--PHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFI-FMNKQQLI 288 (468)
Q Consensus 212 p~l~~~~~~~--p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~-~~~~~~~~ 288 (468)
++++.++... ++++++|||++...... ....+ |..+++|.+|||.++++++|||||||+. ..+.+++.
T Consensus 226 ~~~~~l~~~~~p~~~v~~vGpl~~~~~~~--------~~~~~-~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~~~~~~~ 296 (463)
T 2acv_A 226 SSIDALYDHDEKIPPIYAVGPLLDLKGQP--------NPKLD-QAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIR 296 (463)
T ss_dssp HHHHHHHHHCTTSCCEEECCCCCCSSCCC--------BTTBC-HHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHH
T ss_pred HHHHHHHhccccCCcEEEeCCCccccccc--------ccccc-cccchhHHHHHhcCCCCceEEEEeccccccCCHHHHH
Confidence 9888777644 34499999998642100 00001 2345689999999888899999999999 88888999
Q ss_pred HHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHh--hcCceEecccChHHhhcCCCcceeeeccChhhHHHHHhcCC
Q 012217 289 EVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKA--KEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGV 366 (468)
Q Consensus 289 ~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~Gv 366 (468)
+++++|++++++|||+++.+ .+.+|+++.++. ++|+++++|+||.++|+|+++++|||||||||++|++++||
T Consensus 297 ~~~~~l~~~~~~~l~~~~~~-----~~~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Eal~~Gv 371 (463)
T 2acv_A 297 EIALGLKHSGVRFLWSNSAE-----KKVFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILESMWFGV 371 (463)
T ss_dssp HHHHHHHHHTCEEEEECCCC-----GGGSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCcEEEEECCC-----cccCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHHHHcCC
Confidence 99999999999999999853 123677887777 88999999999999999999999999999999999999999
Q ss_pred cEEecCCCCCcccchhhheeeceeEEEE-eC-CCC--CcchhHHHHHHHHHhc-CchHHHHHHHHHHHHHHHHHHhCCCC
Q 012217 367 PMICWPFTGDQPTNGRYVCNEWGVGMEI-NG-DDE--DVIRNEVEKLVREMME-GEKGKQMRNKAMEWKGLAEEAAAPHG 441 (468)
Q Consensus 367 P~v~~P~~~DQ~~na~~~~~~~g~g~~~-~~-~~~--~~~~~~l~~av~~~l~-~~~~~~~~~~a~~l~~~~~~a~~~gg 441 (468)
|+|++|+++||+.||+++++++|+|+.+ .. +++ .+++++|+++|+++|+ ++ +||+||+++++++++++++||
T Consensus 372 P~i~~P~~~dQ~~Na~~lv~~~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~~~---~~r~~a~~l~~~~~~a~~~gG 448 (463)
T 2acv_A 372 PILTWPIYAEQQLNAFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDS---IVHKKVQEMKEMSRNAVVDGG 448 (463)
T ss_dssp CEEECCCSTTHHHHHHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTC---THHHHHHHHHHHHHHHTSTTS
T ss_pred CeeeccchhhhHHHHHHHHHHcCeEEEEecccCCCCccccHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999965788999999 31 124 6899999999999996 35 899999999999999999999
Q ss_pred chHHHHHHHHHHHH
Q 012217 442 SSSLNLDKLVNEIL 455 (468)
Q Consensus 442 ~s~~~~~~~~~~~~ 455 (468)
+|+.++++||++++
T Consensus 449 ss~~~l~~~v~~~~ 462 (463)
T 2acv_A 449 SSLISVGKLIDDIT 462 (463)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhc
Confidence 99999999999885
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=4.3e-43 Score=356.24 Aligned_cols=355 Identities=15% Similarity=0.133 Sum_probs=247.6
Q ss_pred CCCcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCCCCCCCCCCC-C
Q 012217 8 CSKVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGLPASSDESP-T 86 (468)
Q Consensus 8 ~~~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l~~~~~~~~~~~~-~ 86 (468)
+.++||+++++|++||++|++.||++|+++||+|||++++.+.+.+.+. |++|++++++++....+.+ .
T Consensus 10 m~~~~Il~~~~~~~GHv~p~l~la~~L~~~Gh~V~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~ 79 (424)
T 2iya_A 10 VTPRHISFFNIPGHGHVNPSLGIVQELVARGHRVSYAITDEFAAQVKAA----------GATPVVYDSILPKESNPEESW 79 (424)
T ss_dssp -CCCEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH----------TCEEEECCCCSCCTTCTTCCC
T ss_pred cccceEEEEeCCCCcccchHHHHHHHHHHCCCeEEEEeCHHHHHHHHhC----------CCEEEecCccccccccchhhc
Confidence 4467999999999999999999999999999999999999988888776 8999999876543310000 0
Q ss_pred cCCC----------------------C----C---CCcccchHHHHHHHcCCCeEEEccccHHHHHHHhhhhhhhhhCCC
Q 012217 87 AQDA----------------------Y----S---LDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEKGLF 137 (468)
Q Consensus 87 ~~~~----------------------~----~---~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~g~~ 137 (468)
..++ . . +|.+..|+..+|+++|||++.+++.+....... ..+.....+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~VI~d~~~~~~~~~A~~lgIP~v~~~~~~~~~~~~~-~~~~~~~~~~~ 158 (424)
T 2iya_A 80 PEDQESAMGLFLDEAVRVLPQLEDAYADDRPDLIVYDIASWPAPVLGRKWDIPFVQLSPTFVAYEGFE-EDVPAVQDPTA 158 (424)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHHHTTTSCCSEEEEETTCTHHHHHHHHHTCCEEEEESSCCCCTTHH-HHSGGGSCCCC
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEcCcccHHHHHHHhcCCCEEEEecccccccccc-ccccccccccc
Confidence 0010 0 0 777778999999999999999987654111100 00000000000
Q ss_pred CccccccccccccccccccccccC-CCccCccCccCcccccCCCchhHHHHHHHHHH----------hcccCcEEEecch
Q 012217 138 PVKVLADKSCLTKEYLNSLIDWIP-GMKDIRIRDLPSFIQSTDPKDMMFNLCVEATE----------NASKASAIIIHTF 206 (468)
Q Consensus 138 p~~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~nt~ 206 (468)
... .....| +... ...+..... ....+.+.+..... ....++.++++++
T Consensus 159 ~~~---------------~~~~~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~ 218 (424)
T 2iya_A 159 DRG---------------EEAAAPAGTGD--AEEGAEAED---GLVRFFTRLSAFLEEHGVDTPATEFLIAPNRCIVALP 218 (424)
T ss_dssp --------------------------------------HH---HHHHHHHHHHHHHHHTTCCSCHHHHHHCCSSEEESSC
T ss_pred ccc---------------ccccccccccc--chhhhccch---hHHHHHHHHHHHHHHcCCCCCHHHhccCCCcEEEEcc
Confidence 000 000000 0000 000000000 00000011111111 1114678899999
Q ss_pred hhccHHHHHHHhhcCCCceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCcCCCHHH
Q 012217 207 DALEQQVLNALSFMFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQ 286 (468)
Q Consensus 207 ~~le~p~l~~~~~~~p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~ 286 (468)
++++++ ...+++++++|||+.... .+..+|++..+++++|||++||+.....+.
T Consensus 219 ~~l~~~-----~~~~~~~~~~vGp~~~~~---------------------~~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~ 272 (424)
T 2iya_A 219 RTFQIK-----GDTVGDNYTFVGPTYGDR---------------------SHQGTWEGPGDGRPVLLIALGSAFTDHLDF 272 (424)
T ss_dssp TTTSTT-----GGGCCTTEEECCCCCCCC---------------------GGGCCCCCCCSSCCEEEEECCSSSCCCHHH
T ss_pred hhhCCC-----ccCCCCCEEEeCCCCCCc---------------------ccCCCCCccCCCCCEEEEEcCCCCcchHHH
Confidence 999886 355776699999976421 012368876667789999999998666788
Q ss_pred HHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHHHhcCC
Q 012217 287 LIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGV 366 (468)
Q Consensus 287 ~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~Gv 366 (468)
+.++++++++.+.+++|.++.... .+.+ ...++|+.+++|+||.++|+|+++ ||||||+||++||+++||
T Consensus 273 ~~~~~~al~~~~~~~~~~~g~~~~-------~~~~-~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~ 342 (424)
T 2iya_A 273 YRTCLSAVDGLDWHVVLSVGRFVD-------PADL-GEVPPNVEVHQWVPQLDILTKASA--FITHAGMGSTMEALSNAV 342 (424)
T ss_dssp HHHHHHHHTTCSSEEEEECCTTSC-------GGGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTC
T ss_pred HHHHHHHHhcCCcEEEEEECCcCC-------hHHh-ccCCCCeEEecCCCHHHHHhhCCE--EEECCchhHHHHHHHcCC
Confidence 999999999888899998875421 0111 123578999999999999999998 999999999999999999
Q ss_pred cEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Q 012217 367 PMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEE 435 (468)
Q Consensus 367 P~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~ 435 (468)
|+|++|.+.||+.||+++ +++|+|+.+.. +.++.++|+++|+++|+|+ +|+++++++++++++
T Consensus 343 P~i~~p~~~dQ~~na~~l-~~~g~g~~~~~--~~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~ 405 (424)
T 2iya_A 343 PMVAVPQIAEQTMNAERI-VELGLGRHIPR--DQVTAEKLREAVLAVASDP---GVAERLAAVRQEIRE 405 (424)
T ss_dssp CEEECCCSHHHHHHHHHH-HHTTSEEECCG--GGCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT
T ss_pred CEEEecCccchHHHHHHH-HHCCCEEEcCc--CCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh
Confidence 999999999999999999 67899999874 5789999999999999988 899999999999875
No 7
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=1.5e-41 Score=341.89 Aligned_cols=156 Identities=19% Similarity=0.303 Sum_probs=128.9
Q ss_pred hhhccccCCCCceEEEeecCCcCCC--HHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccC
Q 012217 259 CLQWLDCKEPKSVIYVNFGSFIFMN--KQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCP 336 (468)
Q Consensus 259 ~~~wld~~~~~~vv~vs~GS~~~~~--~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p 336 (468)
+.+|++..+.+++|||||||+.... .+.+.++++++++.+..++|..++.... .. ...++|+++.+|+|
T Consensus 227 ~~~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~----~~-----~~~~~~v~~~~~~p 297 (400)
T 4amg_A 227 LPDWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDLA----LL-----GELPANVRVVEWIP 297 (400)
T ss_dssp CCTTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCCC----CC-----CCCCTTEEEECCCC
T ss_pred CcccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCcccc----cc-----ccCCCCEEEEeecC
Confidence 4479998888999999999986543 3578889999999999999998764211 11 12357999999999
Q ss_pred hHHhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcC
Q 012217 337 QEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEG 416 (468)
Q Consensus 337 ~~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~ 416 (468)
|.++|+|+++ |||||||||++||+++|||+|++|+++||+.||+++ ++.|+|+.+.. .+.++ ++|+++|+|
T Consensus 298 ~~~lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v-~~~G~g~~l~~--~~~~~----~al~~lL~d 368 (400)
T 4amg_A 298 LGALLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVL-TGLGIGFDAEA--GSLGA----EQCRRLLDD 368 (400)
T ss_dssp HHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHH-HHHTSEEECCT--TTCSH----HHHHHHHHC
T ss_pred HHHHhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHH-HHCCCEEEcCC--CCchH----HHHHHHHcC
Confidence 9999999988 999999999999999999999999999999999999 67899999874 44554 567788999
Q ss_pred chHHHHHHHHHHHHHHHHH
Q 012217 417 EKGKQMRNKAMEWKGLAEE 435 (468)
Q Consensus 417 ~~~~~~~~~a~~l~~~~~~ 435 (468)
+ +||+||+++++++++
T Consensus 369 ~---~~r~~a~~l~~~~~~ 384 (400)
T 4amg_A 369 A---GLREAALRVRQEMSE 384 (400)
T ss_dssp H---HHHHHHHHHHHHHHT
T ss_pred H---HHHHHHHHHHHHHHc
Confidence 9 999999999999986
No 8
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.4e-40 Score=336.83 Aligned_cols=361 Identities=13% Similarity=0.101 Sum_probs=241.3
Q ss_pred cEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCCCCCCCCCCC-Cc--
Q 012217 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGLPASSDESP-TA-- 87 (468)
Q Consensus 11 ~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l~~~~~~~~~~~~-~~-- 87 (468)
|||+++++|+.||++|+++||++|++|||+|||++++.+.+.+.+. |++|+.++........... ..
T Consensus 1 M~Il~~~~~~~GHv~P~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~----------g~~~~~i~~~~~~~~~~~~~~~~~ 70 (415)
T 1iir_A 1 MRVLLATCGSRGDTEPLVALAVRVRDLGADVRMCAPPDCAERLAEV----------GVPHVPVGPSARAPIQRAKPLTAE 70 (415)
T ss_dssp CEEEEECCSCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT----------TCCEEECCC-------CCSCCCHH
T ss_pred CeEEEEcCCCchhHHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHc----------CCeeeeCCCCHHHHhhcccccchH
Confidence 5999999999999999999999999999999999998877766665 8899888754321100000 00
Q ss_pred --------------CCC----CC-----CCc-ccch--HHHHHHHcCCCeEEEccccHHHHHHHhhhhhhhhhCCCCccc
Q 012217 88 --------------QDA----YS-----LDG-FLPF--TITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEKGLFPVKV 141 (468)
Q Consensus 88 --------------~~~----~~-----~D~-~~~~--~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~g~~p~~~ 141 (468)
..+ .. +|. +..| +..+|+++|||++.+++.+..... .+.|...
T Consensus 71 ~~~~~~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP~v~~~~~~~~~~~-----------~~~p~~~ 139 (415)
T 1iir_A 71 DVRRFTTEAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIPYFYAFHCPSYVPS-----------PYYPPPP 139 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-----------SSSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCCEEEEecCCCcCCC-----------cccCCcc
Confidence 000 00 455 4567 888999999999999876533210 1111110
Q ss_pred cccccccccccccccccccCCCccCccCccCcccccCCCchhHHHHHHHHH------------HhcccCcEEEecchhhc
Q 012217 142 LADKSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEAT------------ENASKASAIIIHTFDAL 209 (468)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~l~nt~~~l 209 (468)
....+|+-. . ...+................+.... +..... .+++|+++++
T Consensus 140 --------------~~~~~~~~~-~-~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~~l 202 (415)
T 1iir_A 140 --------------LGEPSTQDT-I-DIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDIFTFGYTD-HPWVAADPVL 202 (415)
T ss_dssp ------------------------C-HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHHCS-SCEECSCTTT
T ss_pred --------------CCccccchH-H-HHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCccccccCCC-CEEEeeChhh
Confidence 000000000 0 0000000000000000000000010 011122 6899999999
Q ss_pred cH-HHHHHHhhcCCCceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCcCCCHHHHH
Q 012217 210 EQ-QVLNALSFMFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLI 288 (468)
Q Consensus 210 e~-p~l~~~~~~~p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~ 288 (468)
++ + ++.+ + +++|||+..... +..+.++.+|||+++ ++|||++||+. ...+.+.
T Consensus 203 ~~~~-----~~~~-~-~~~vG~~~~~~~----------------~~~~~~~~~~l~~~~--~~v~v~~Gs~~-~~~~~~~ 256 (415)
T 1iir_A 203 APLQ-----PTDL-D-AVQTGAWILPDE----------------RPLSPELAAFLDAGP--PPVYLGFGSLG-APADAVR 256 (415)
T ss_dssp SCCC-----CCSS-C-CEECCCCCCCCC----------------CCCCHHHHHHHHTSS--CCEEEECC----CCHHHHH
T ss_pred cCCC-----cccC-C-eEeeCCCccCcc----------------cCCCHHHHHHHhhCC--CeEEEeCCCCC-CcHHHHH
Confidence 87 4 4445 4 999999876311 123457889998753 69999999997 5677888
Q ss_pred HHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHHHhcCCcE
Q 012217 289 EVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPM 368 (468)
Q Consensus 289 ~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP~ 368 (468)
.+++++++.+.+++|+++.... . . ...++|+.+.+|+||.++|+++++ ||||||+||++||+++|||+
T Consensus 257 ~~~~al~~~~~~~v~~~g~~~~----~-~-----~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~ 324 (415)
T 1iir_A 257 VAIDAIRAHGRRVILSRGWADL----V-L-----PDDGADCFAIGEVNHQVLFGRVAA--VIHHGGAGTTHVAARAGAPQ 324 (415)
T ss_dssp HHHHHHHHTTCCEEECTTCTTC----C-C-----SSCGGGEEECSSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCE
T ss_pred HHHHHHHHCCCeEEEEeCCCcc----c-c-----cCCCCCEEEeCcCChHHHHhhCCE--EEeCCChhHHHHHHHcCCCE
Confidence 8999999999999999875421 0 1 123568999999999999977776 99999999999999999999
Q ss_pred EecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCCCchHHHHH
Q 012217 369 ICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLD 448 (468)
Q Consensus 369 v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~ 448 (468)
|++|++.||+.||+++ +++|+|+.+.. +.++.++|.++|+++ +|+ +|+++++++++++++ ......+.
T Consensus 325 i~~p~~~dQ~~na~~l-~~~g~g~~~~~--~~~~~~~l~~~i~~l-~~~---~~~~~~~~~~~~~~~-----~~~~~~~~ 392 (415)
T 1iir_A 325 ILLPQMADQPYYAGRV-AELGVGVAHDG--PIPTFDSLSAALATA-LTP---ETHARATAVAGTIRT-----DGAAVAAR 392 (415)
T ss_dssp EECCCSTTHHHHHHHH-HHHTSEEECSS--SSCCHHHHHHHHHHH-TSH---HHHHHHHHHHHHSCS-----CHHHHHHH
T ss_pred EECCCCCccHHHHHHH-HHCCCcccCCc--CCCCHHHHHHHHHHH-cCH---HHHHHHHHHHHHHhh-----cChHHHHH
Confidence 9999999999999999 78899998874 578999999999999 888 899999999988753 23345556
Q ss_pred HHHHHHHhcCC
Q 012217 449 KLVNEILLSNK 459 (468)
Q Consensus 449 ~~~~~~~~~~~ 459 (468)
+.++++.+.+.
T Consensus 393 ~~i~~~~~~~~ 403 (415)
T 1iir_A 393 LLLDAVSREKP 403 (415)
T ss_dssp HHHHHHHTC--
T ss_pred HHHHHHHhccc
Confidence 66666665543
No 9
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=1.1e-39 Score=330.41 Aligned_cols=359 Identities=13% Similarity=0.077 Sum_probs=241.7
Q ss_pred cEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCCCCCCCCC--CCCcC
Q 012217 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGLPASSDE--SPTAQ 88 (468)
Q Consensus 11 ~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l~~~~~~~~~~--~~~~~ 88 (468)
|||+++++++.||++|++.||++|+++||+|||++++.+.+.+.+. |++|+.++......... .....
T Consensus 1 MrIl~~~~~~~GH~~p~l~la~~L~~~Gh~V~~~~~~~~~~~v~~~----------g~~~~~~~~~~~~~~~~~~~~~~~ 70 (416)
T 1rrv_A 1 MRVLLSVCGTRGDVEIGVALADRLKALGVQTRMCAPPAAEERLAEV----------GVPHVPVGLPQHMMLQEGMPPPPP 70 (416)
T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHH----------TCCEEECSCCGGGCCCTTSCCCCH
T ss_pred CeEEEEecCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc----------CCeeeecCCCHHHHHhhccccchh
Confidence 5999999999999999999999999999999999998887777776 89999887543211000 00000
Q ss_pred -CC------------------C-C-----CCc-ccch--HHHHHHHcCCCeEEEccccHHHHHHHhhhhhhhhhCCCCcc
Q 012217 89 -DA------------------Y-S-----LDG-FLPF--TITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEKGLFPVK 140 (468)
Q Consensus 89 -~~------------------~-~-----~D~-~~~~--~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~g~~p~~ 140 (468)
.+ . . +|. +.++ +..+|+++|||++.+++.+..... .+.| +
T Consensus 71 ~~~~~~~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~giP~v~~~~~~~~~~~-----------~~~p-~ 138 (416)
T 1rrv_A 71 EEEQRLAAMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLAS-----------PHLP-P 138 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCC-----------SSSC-C
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCCCEEEEeCCCCCCCC-----------cccC-C
Confidence 00 0 0 343 2345 778899999999988765432100 0011 0
Q ss_pred ccccccccccccccccccccCC-CccCccCccCcccccCCCchhHHHHHHHH------------HHhcccCcEEEecchh
Q 012217 141 VLADKSCLTKEYLNSLIDWIPG-MKDIRIRDLPSFIQSTDPKDMMFNLCVEA------------TENASKASAIIIHTFD 207 (468)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~pg-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~l~nt~~ 207 (468)
.. .....++ +.+.. +..+... .........+... .+...+. .+++|+++
T Consensus 139 ---~~----------~~~~~~~r~~n~~---~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~l~~~~~ 200 (416)
T 1rrv_A 139 ---AY----------DEPTTPGVTDIRV---LWEERAA-RFADRYGPTLNRRRAEIGLPPVEDVFGYGHGE-RPLLAADP 200 (416)
T ss_dssp ---CB----------CSCCCTTCCCHHH---HHHHHHH-HHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCS-SCEECSCT
T ss_pred ---CC----------CCCCCchHHHHHH---HHHHHHH-HHHHHhHHHHHHHHHHcCCCCCCchhhhccCC-CeEEccCc
Confidence 00 0000000 00000 0000000 0000000000011 1111223 68999999
Q ss_pred hccHHHHHHHhhcCCCceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCcC-CCHHH
Q 012217 208 ALEQQVLNALSFMFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIF-MNKQQ 286 (468)
Q Consensus 208 ~le~p~l~~~~~~~p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~~-~~~~~ 286 (468)
+++++ ++.+ + +++|||+..... +..+.++.+||+++ +++|||++||+.. ...+.
T Consensus 201 ~l~~~-----~~~~-~-~~~vG~~~~~~~----------------~~~~~~~~~~l~~~--~~~v~v~~Gs~~~~~~~~~ 255 (416)
T 1rrv_A 201 VLAPL-----QPDV-D-AVQTGAWLLSDE----------------RPLPPELEAFLAAG--SPPVHIGFGSSSGRGIADA 255 (416)
T ss_dssp TTSCC-----CSSC-C-CEECCCCCCCCC----------------CCCCHHHHHHHHSS--SCCEEECCTTCCSHHHHHH
T ss_pred cccCC-----CCCC-C-eeeECCCccCcc----------------CCCCHHHHHHHhcC--CCeEEEecCCCCccChHHH
Confidence 99875 3344 4 999999876311 12345788999875 3699999999864 34567
Q ss_pred HHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHHHhcCC
Q 012217 287 LIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGV 366 (468)
Q Consensus 287 ~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~Gv 366 (468)
+.++++++++.+.+|+|+++.... . . ...++|+.+++|+||.++|+++++ ||||||+||++||+++||
T Consensus 256 ~~~~~~al~~~~~~~v~~~g~~~~----~-~-----~~~~~~v~~~~~~~~~~ll~~~d~--~v~~~G~~t~~Ea~~~G~ 323 (416)
T 1rrv_A 256 AKVAVEAIRAQGRRVILSRGWTEL----V-L-----PDDRDDCFAIDEVNFQALFRRVAA--VIHHGSAGTEHVATRAGV 323 (416)
T ss_dssp HHHHHHHHHHTTCCEEEECTTTTC----C-C-----SCCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTC
T ss_pred HHHHHHHHHHCCCeEEEEeCCccc----c-c-----cCCCCCEEEeccCChHHHhccCCE--EEecCChhHHHHHHHcCC
Confidence 888999999999999999886421 0 1 123578999999999999987777 999999999999999999
Q ss_pred cEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCCCchHHH
Q 012217 367 PMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLN 446 (468)
Q Consensus 367 P~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~ 446 (468)
|+|++|++.||+.||+++ ++.|+|+.+.. ..++.++|+++|+++ +|+ +|+++++++++++++ .+.+ +.
T Consensus 324 P~i~~p~~~dQ~~na~~l-~~~g~g~~~~~--~~~~~~~l~~~i~~l-~~~---~~~~~~~~~~~~~~~----~~~~-~~ 391 (416)
T 1rrv_A 324 PQLVIPRNTDQPYFAGRV-AALGIGVAHDG--PTPTFESLSAALTTV-LAP---ETRARAEAVAGMVLT----DGAA-AA 391 (416)
T ss_dssp CEEECCCSBTHHHHHHHH-HHHTSEEECSS--SCCCHHHHHHHHHHH-TSH---HHHHHHHHHTTTCCC----CHHH-HH
T ss_pred CEEEccCCCCcHHHHHHH-HHCCCccCCCC--CCCCHHHHHHHHHHh-hCH---HHHHHHHHHHHHHhh----cCcH-HH
Confidence 999999999999999999 67899998874 578999999999999 888 899999999988763 2333 44
Q ss_pred HHHHHHHHHhcC
Q 012217 447 LDKLVNEILLSN 458 (468)
Q Consensus 447 ~~~~~~~~~~~~ 458 (468)
++.+++.+.+..
T Consensus 392 ~~~i~e~~~~~~ 403 (416)
T 1rrv_A 392 ADLVLAAVGREK 403 (416)
T ss_dssp HHHHHHHHHC--
T ss_pred HHHHHHHHhccC
Confidence 443326665543
No 10
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=100.00 E-value=3.8e-37 Score=310.54 Aligned_cols=336 Identities=14% Similarity=0.113 Sum_probs=228.7
Q ss_pred cEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCCCCCCCC-CCCCcCC
Q 012217 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGLPASSD-ESPTAQD 89 (468)
Q Consensus 11 ~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l~~~~~~~~~-~~~~~~~ 89 (468)
|||+++++++.||++|++.||++|+++||+|+|++++.+.+.+++. |++|..++........ .......
T Consensus 1 MrIli~~~gt~Ghv~p~~~La~~L~~~Gh~V~v~~~~~~~~~v~~~----------g~~~~~l~~~~~~~~~~~~~~~~~ 70 (404)
T 3h4t_A 1 MGVLITGCGSRGDTEPLVALAARLRELGADARMCLPPDYVERCAEV----------GVPMVPVGRAVRAGAREPGELPPG 70 (404)
T ss_dssp -CEEEEEESSHHHHHHHHHHHHHHHHTTCCEEEEECGGGHHHHHHT----------TCCEEECSSCSSGGGSCTTCCCTT
T ss_pred CeEEEEeCCCCccHHHHHHHHHHHHHCCCeEEEEeCHHHHHHHHHc----------CCceeecCCCHHHHhccccCCHHH
Confidence 4899999999999999999999999999999999999888888776 8999998744321000 0000000
Q ss_pred CC-------------------CCCccc-----chH---HHHHHHcCCCeEEEccccHHHHHHHhhh-hhhhhhC-CCCcc
Q 012217 90 AY-------------------SLDGFL-----PFT---ITAAQQLGLPIVLFFTISACSFMGFKQF-QTFKEKG-LFPVK 140 (468)
Q Consensus 90 ~~-------------------~~D~~~-----~~~---~~vA~~lgIP~v~~~~~~~~~~~~~~~~-~~~~~~g-~~p~~ 140 (468)
+. ..|.+. .++ ..+|+++|||++.+..++....+..++. ....... ..++.
T Consensus 71 ~~~~~~~~~~~~~~~l~~~~~~pD~Vi~~~~~~~~~~a~~~A~~lgiP~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 150 (404)
T 3h4t_A 71 AAEVVTEVVAEWFDKVPAAIEGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMYNQGADRLFG 150 (404)
T ss_dssp CGGGHHHHHHHHHHHHHHHHTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEECCchhhhhhhhhHHhhcCCCEEEEEcCCccCCChhHHHHHHHHHHHHHHHhH
Confidence 00 044332 222 6789999999998876553210000000 0000000 00000
Q ss_pred ccccccccccccccccccccCCCccCccCccCcccccCCCchhHHHHHHHHHHhcccCcEEEecchhhccHHHHHHHhhc
Q 012217 141 VLADKSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEATENASKASAIIIHTFDALEQQVLNALSFM 220 (468)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~~le~p~l~~~~~~ 220 (468)
. .+.+.... -|+++ ... ... . ...+..+++..+.+.+. +.
T Consensus 151 ---~-------~~~~~~~~-lgl~~--------------~~~-~~~-------~-~~~~~~l~~~~~~l~p~------~~ 190 (404)
T 3h4t_A 151 ---D-------AVNSHRAS-IGLPP--------------VEH-LYD-------Y-GYTDQPWLAADPVLSPL------RP 190 (404)
T ss_dssp ---H-------HHHHHHHH-TTCCC--------------CCC-HHH-------H-HHCSSCEECSCTTTSCC------CT
T ss_pred ---H-------HHHHHHHH-cCCCC--------------Ccc-hhh-------c-cccCCeEEeeCcceeCC------CC
Confidence 0 00000000 00100 000 000 0 01223455666666554 23
Q ss_pred CCCceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCcCCCHHHHHHHHHHHHcCCCC
Q 012217 221 FPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIEVAMGLVNSNHP 300 (468)
Q Consensus 221 ~p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~ 300 (468)
++.+++++|+++.+.. +..++++.+|++.. +++|||++||+.. ..+.+..+++++++.+.+
T Consensus 191 ~~~~~~~~G~~~~~~~----------------~~~~~~l~~~l~~~--~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~ 251 (404)
T 3h4t_A 191 TDLGTVQTGAWILPDQ----------------RPLSAELEGFLRAG--SPPVYVGFGSGPA-PAEAARVAIEAVRAQGRR 251 (404)
T ss_dssp TCCSCCBCCCCCCCCC----------------CCCCHHHHHHHHTS--SCCEEECCTTSCC-CTTHHHHHHHHHHHTTCC
T ss_pred CCCCeEEeCccccCCC----------------CCCCHHHHHHHhcC--CCeEEEECCCCCC-cHHHHHHHHHHHHhCCCE
Confidence 5555999998875321 11345788899853 4699999999987 667888999999999999
Q ss_pred EEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCCCcccc
Q 012217 301 FLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTN 380 (468)
Q Consensus 301 ~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~n 380 (468)
+||+.++... ..+ ..++|+.+++|+||.++|+++++ ||||||+||+.|++++|||+|++|+++||+.|
T Consensus 252 vv~~~g~~~~----~~~------~~~~~v~~~~~~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~n 319 (404)
T 3h4t_A 252 VVLSSGWAGL----GRI------DEGDDCLVVGEVNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYY 319 (404)
T ss_dssp EEEECTTTTC----CCS------SCCTTEEEESSCCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHH
T ss_pred EEEEeCCccc----ccc------cCCCCEEEecCCCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHH
Confidence 9999886421 111 12579999999999999998888 99999999999999999999999999999999
Q ss_pred hhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Q 012217 381 GRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAE 434 (468)
Q Consensus 381 a~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~ 434 (468)
|+++ ++.|+|+.+.. +.++.++|.++|+++++ + +|+++++++++.++
T Consensus 320 a~~~-~~~G~g~~l~~--~~~~~~~l~~ai~~ll~-~---~~~~~~~~~~~~~~ 366 (404)
T 3h4t_A 320 AGRV-ADLGVGVAHDG--PTPTVESLSAALATALT-P---GIRARAAAVAGTIR 366 (404)
T ss_dssp HHHH-HHHTSEEECSS--SSCCHHHHHHHHHHHTS-H---HHHHHHHHHHTTCC
T ss_pred HHHH-HHCCCEeccCc--CCCCHHHHHHHHHHHhC-H---HHHHHHHHHHHHHh
Confidence 9999 77899999875 67899999999999998 7 89999999998765
No 11
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=100.00 E-value=5.3e-36 Score=302.97 Aligned_cols=353 Identities=14% Similarity=0.156 Sum_probs=244.4
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCCCCCCCCC-----C
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGLPASSDE-----S 84 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l~~~~~~~~~~-----~ 84 (468)
++||+++++++.||++|++.||++|+++||+|+|++++.+.+.+++. |++|..++..++..... .
T Consensus 20 m~rIl~~~~~~~GHv~p~l~La~~L~~~Gh~V~v~~~~~~~~~~~~~----------G~~~~~~~~~~~~~~~~~~~~~~ 89 (415)
T 3rsc_A 20 MAHLLIVNVASHGLILPTLTVVTELVRRGHRVSYVTAGGFAEPVRAA----------GATVVPYQSEIIDADAAEVFGSD 89 (415)
T ss_dssp CCEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHHT----------TCEEEECCCSTTTCCHHHHHHSS
T ss_pred CCEEEEEeCCCccccccHHHHHHHHHHCCCEEEEEeCHHHHHHHHhc----------CCEEEeccccccccccchhhccc
Confidence 57999999999999999999999999999999999999888888776 89999987544322000 0
Q ss_pred CC--------c--------------CCC-CC---CC-cccchHHHHHHHcCCCeEEEccccHHHHHHHhhhhhhhhhCCC
Q 012217 85 PT--------A--------------QDA-YS---LD-GFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEKGLF 137 (468)
Q Consensus 85 ~~--------~--------------~~~-~~---~D-~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~g~~ 137 (468)
.. . ... +. +| .+..++..+|+++|||++.+.+...... .+.
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~PDlVi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~------------~~~ 157 (415)
T 3rsc_A 90 DLGVRPHLMYLRENVSVLRATAEALDGDVPDLVLYDDFPFIAGQLLAARWRRPAVRLSAAFASNE------------HYS 157 (415)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEESTTHHHHHHHHHHTTCCEEEEESSCCCCS------------SCC
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchhhhHHHHHHHHhCCCEEEEEecccccC------------ccc
Confidence 00 0 000 00 67 6666788889999999998764321100 000
Q ss_pred CccccccccccccccccccccccCCCccCccCccCcccccCCCchhHHHHHHHH------HHhcccC-cEEEecchhhcc
Q 012217 138 PVKVLADKSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEA------TENASKA-SAIIIHTFDALE 210 (468)
Q Consensus 138 p~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~-~~~l~nt~~~le 210 (468)
+.. . ......... +..... ....+.+.+... ....... +..++.+.+.++
T Consensus 158 ~~~----~----------~~~~~~~~~-------p~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~ 214 (415)
T 3rsc_A 158 FSQ----D----------MVTLAGTID-------PLDLPV--FRDTLRDLLAEHGLSRSVVDCWNHVEQLNLVFVPKAFQ 214 (415)
T ss_dssp HHH----H----------HHHHHTCCC-------GGGCHH--HHHHHHHHHHHTTCCCCHHHHHTCCCSEEEESSCTTTS
T ss_pred ccc----c----------cccccccCC-------hhhHHH--HHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCcccC
Confidence 000 0 000000000 000000 000000000000 0011122 667777776666
Q ss_pred HHHHHHHhhcCCCceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCcCCCHHHHHHH
Q 012217 211 QQVLNALSFMFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIEV 290 (468)
Q Consensus 211 ~p~l~~~~~~~p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~ 290 (468)
++ +..++.++.++||+..... +..+|+...+.+++|||++||......+.+..+
T Consensus 215 ~~-----~~~~~~~~~~vGp~~~~~~---------------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~ 268 (415)
T 3rsc_A 215 IA-----GDTFDDRFVFVGPCFDDRR---------------------FLGEWTRPADDLPVVLVSLGTTFNDRPGFFRDC 268 (415)
T ss_dssp TT-----GGGCCTTEEECCCCCCCCG---------------------GGCCCCCCSSCCCEEEEECTTTSCCCHHHHHHH
T ss_pred CC-----cccCCCceEEeCCCCCCcc---------------------cCcCccccCCCCCEEEEECCCCCCChHHHHHHH
Confidence 55 5667777999999765211 123466555567899999999987677888999
Q ss_pred HHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHHHhcCCcEEe
Q 012217 291 AMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMIC 370 (468)
Q Consensus 291 ~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~ 370 (468)
++++++.+.+++|.++.+.. .+.+ +..++|+.+.+|+|+.++|+++++ ||||||+||++|++++|+|+|+
T Consensus 269 ~~al~~~~~~~v~~~g~~~~-------~~~l-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~ 338 (415)
T 3rsc_A 269 ARAFDGQPWHVVMTLGGQVD-------PAAL-GDLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLMEALYWGRPLVV 338 (415)
T ss_dssp HHHHTTSSCEEEEECTTTSC-------GGGG-CCCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHHHHHTTCCEEE
T ss_pred HHHHhcCCcEEEEEeCCCCC-------hHHh-cCCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHHHHHhCCCEEE
Confidence 99999888899998875411 0111 123579999999999999999998 9999999999999999999999
Q ss_pred cCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHH
Q 012217 371 WPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKL 450 (468)
Q Consensus 371 ~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~ 450 (468)
+|...||+.||+++ ++.|+|+.+.. +.++.++|.++|+++|+|+ +++++++++++.+.+ .+.+.+.++.+
T Consensus 339 ~p~~~~q~~~a~~l-~~~g~g~~~~~--~~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~----~~~~~~~~~~i 408 (415)
T 3rsc_A 339 VPQSFDVQPMARRV-DQLGLGAVLPG--EKADGDTLLAAVGAVAADP---ALLARVEAMRGHVRR----AGGAARAADAV 408 (415)
T ss_dssp CCCSGGGHHHHHHH-HHHTCEEECCG--GGCCHHHHHHHHHHHHTCH---HHHHHHHHHHHHHHH----SCHHHHHHHHH
T ss_pred eCCcchHHHHHHHH-HHcCCEEEccc--CCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh----cCHHHHHHHHH
Confidence 99999999999999 66799998875 5789999999999999998 899999999999886 34444544444
Q ss_pred HHH
Q 012217 451 VNE 453 (468)
Q Consensus 451 ~~~ 453 (468)
.+.
T Consensus 409 ~~~ 411 (415)
T 3rsc_A 409 EAY 411 (415)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 12
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=100.00 E-value=3.8e-35 Score=295.03 Aligned_cols=349 Identities=16% Similarity=0.171 Sum_probs=241.2
Q ss_pred cEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCCCCCCCCCCCCc---
Q 012217 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGLPASSDESPTA--- 87 (468)
Q Consensus 11 ~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l~~~~~~~~~~~~~~--- 87 (468)
+||+++++++.||++|++.||++|+++||+|++++++.+.+.+.+. |++|..++..++.........
T Consensus 5 ~~il~~~~~~~Ghv~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~----------G~~~~~~~~~~~~~~~~~~~~~~~ 74 (402)
T 3ia7_A 5 RHILFANVQGHGHVYPSLGLVSELARRGHRITYVTTPLFADEVKAA----------GAEVVLYKSEFDTFHVPEVVKQED 74 (402)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHT----------TCEEEECCCGGGTSSSSSSSCCTT
T ss_pred CEEEEEeCCCCcccccHHHHHHHHHhCCCEEEEEcCHHHHHHHHHc----------CCEEEecccccccccccccccccc
Confidence 4999999999999999999999999999999999998888887776 899999875433220000000
Q ss_pred -----------------CCC--------CC---CC-cccchHHHHHHHcCCCeEEEccccHHHHHHHhhhhhhhhhCCCC
Q 012217 88 -----------------QDA--------YS---LD-GFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEKGLFP 138 (468)
Q Consensus 88 -----------------~~~--------~~---~D-~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~g~~p 138 (468)
..+ +. +| .+..++..+|+++|||++.+.+....... +...+.+...
T Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~aA~~~giP~v~~~~~~~~~~~-~~~~~~~~~~---- 149 (402)
T 3ia7_A 75 AETQLHLVYVRENVAILRAAEEALGDNPPDLVVYDVFPFIAGRLLAARWDRPAVRLTGGFAANEH-YSLFKELWKS---- 149 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEESTTHHHHHHHHHHHTCCEEEEESSCCCBTT-BCHHHHHHHH----
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEECchHHHHHHHHHHhhCCCEEEEecccccCcc-cccccccccc----
Confidence 000 00 67 66667888899999999987543221100 0000000000
Q ss_pred ccccccccccccccccccccccCCCccCccCccCcccccCCCchhHHHHHHHHH----------HhcccC-cEEEecchh
Q 012217 139 VKVLADKSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEAT----------ENASKA-SAIIIHTFD 207 (468)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~----------~~~~~~-~~~l~nt~~ 207 (468)
..... +.. .......+.... ...... +..++.+.+
T Consensus 150 ---------------------~~~~~-------~~~------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~ 195 (402)
T 3ia7_A 150 ---------------------NGQRH-------PAD------VEAVHSVLVDLLGKYGVDTPVKEYWDEIEGLTIVFLPK 195 (402)
T ss_dssp ---------------------HTCCC-------GGG------SHHHHHHHHHHHHTTTCCSCHHHHHTCCCSCEEESSCG
T ss_pred ---------------------ccccC-------hhh------HHHHHHHHHHHHHHcCCCCChhhhhcCCCCeEEEEcCh
Confidence 00000 000 000000000000 011122 556666666
Q ss_pred hccHHHHHHHhhcCCCceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCcCCCHHHH
Q 012217 208 ALEQQVLNALSFMFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQL 287 (468)
Q Consensus 208 ~le~p~l~~~~~~~p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~ 287 (468)
+++++ +..++.++.+|||+..... +...|+...+++++|||++||......+.+
T Consensus 196 ~~~~~-----~~~~~~~~~~vGp~~~~~~---------------------~~~~~~~~~~~~~~v~v~~G~~~~~~~~~~ 249 (402)
T 3ia7_A 196 SFQPF-----AETFDERFAFVGPTLTGRD---------------------GQPGWQPPRPDAPVLLVSLGNQFNEHPEFF 249 (402)
T ss_dssp GGSTT-----GGGCCTTEEECCCCCCC-------------------------CCCCCSSTTCCEEEEECCSCSSCCHHHH
T ss_pred HhCCc-----cccCCCCeEEeCCCCCCcc---------------------cCCCCcccCCCCCEEEEECCCCCcchHHHH
Confidence 66654 5567777999999764211 122466555567899999999987777789
Q ss_pred HHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHHHhcCCc
Q 012217 288 IEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVP 367 (468)
Q Consensus 288 ~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP 367 (468)
..+++++++.+..++|..+.+.. .+.+ +..++|+.+.+|+|+.++|+++++ ||||||+||+.|++++|+|
T Consensus 250 ~~~~~~~~~~~~~~~~~~g~~~~-------~~~~-~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P 319 (402)
T 3ia7_A 250 RACAQAFADTPWHVVMAIGGFLD-------PAVL-GPLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAGVP 319 (402)
T ss_dssp HHHHHHHTTSSCEEEEECCTTSC-------GGGG-CSCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTTCC
T ss_pred HHHHHHHhcCCcEEEEEeCCcCC-------hhhh-CCCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhCCC
Confidence 99999999888888988875411 0111 123579999999999999999998 9999999999999999999
Q ss_pred EEecCC-CCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCCCchHHH
Q 012217 368 MICWPF-TGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLN 446 (468)
Q Consensus 368 ~v~~P~-~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~ 446 (468)
+|++|. ..||+.||+++ ++.|+|+.+.. +.++++.|.++|+++|+|+ +++++++++++++.+ .+.+.+.
T Consensus 320 ~v~~p~~~~~q~~~a~~~-~~~g~g~~~~~--~~~~~~~l~~~~~~ll~~~---~~~~~~~~~~~~~~~----~~~~~~~ 389 (402)
T 3ia7_A 320 LVLVPHFATEAAPSAERV-IELGLGSVLRP--DQLEPASIREAVERLAADS---AVRERVRRMQRDILS----SGGPARA 389 (402)
T ss_dssp EEECGGGCGGGHHHHHHH-HHTTSEEECCG--GGCSHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT----SCHHHHH
T ss_pred EEEeCCCcccHHHHHHHH-HHcCCEEEccC--CCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHhh----CChHHHH
Confidence 999999 99999999999 67799998875 5789999999999999998 899999999998875 4455555
Q ss_pred HHHHHHHH
Q 012217 447 LDKLVNEI 454 (468)
Q Consensus 447 ~~~~~~~~ 454 (468)
.+.+.+.+
T Consensus 390 ~~~i~~~~ 397 (402)
T 3ia7_A 390 ADEVEAYL 397 (402)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55444444
No 13
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=2.1e-35 Score=300.05 Aligned_cols=339 Identities=16% Similarity=0.157 Sum_probs=231.7
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCCCCCCCCCCC-CcC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGLPASSDESP-TAQ 88 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l~~~~~~~~~~~~-~~~ 88 (468)
.+||++++.++.||++|++.|+++|+++||+|+++++....+.+.+. |++++.++..++......+ ...
T Consensus 7 m~kIl~~~~~~~Gh~~p~~~la~~L~~~G~~V~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~~~ 76 (430)
T 2iyf_A 7 PAHIAMFSIAAHGHVNPSLEVIRELVARGHRVTYAIPPVFADKVAAT----------GPRPVLYHSTLPGPDADPEAWGS 76 (430)
T ss_dssp -CEEEEECCSCHHHHGGGHHHHHHHHHTTCEEEEEECGGGHHHHHTT----------SCEEEECCCCSCCTTSCGGGGCS
T ss_pred cceEEEEeCCCCccccchHHHHHHHHHCCCeEEEEeCHHHHHHHHhC----------CCEEEEcCCcCccccccccccch
Confidence 46999999999999999999999999999999999998876666554 8899988765432210000 000
Q ss_pred C-------------------------C-CC---CCcccchHHHHHHHcCCCeEEEccccHHHHHHHhhhhhhhhhCCCCc
Q 012217 89 D-------------------------A-YS---LDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQTFKEKGLFPV 139 (468)
Q Consensus 89 ~-------------------------~-~~---~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~g~~p~ 139 (468)
. . +. +|.+..|+..+|+++|||++.+++....... +...+ ..+ .
T Consensus 77 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~-~~~~~---~~~---~ 149 (430)
T 2iyf_A 77 TLLDNVEPFLNDAIQALPQLADAYADDIPDLVLHDITSYPARVLARRWGVPAVSLSPNLVAWKG-YEEEV---AEP---M 149 (430)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHTTSCCSEEEEETTCHHHHHHHHHHTCCEEEEESSCCCCTT-HHHHT---HHH---H
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEECCccHHHHHHHHHcCCCEEEEecccccccc-ccccc---ccc---h
Confidence 0 0 00 6665568888999999999998765421000 00000 000 0
Q ss_pred cccccccccccccccccccccCCCccCccCccCcccccCCCchhHHHHHHH------HHHhcccCcEEEecchhhccHHH
Q 012217 140 KVLADKSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVE------ATENASKASAIIIHTFDALEQQV 213 (468)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~nt~~~le~p~ 213 (468)
. + .....++...+ .....+.+.. ..+.....+.+++++.++++++
T Consensus 150 ~-------------~-~~~~~~~~~~~--------------~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~- 200 (430)
T 2iyf_A 150 W-------------R-EPRQTERGRAY--------------YARFEAWLKENGITEHPDTFASHPPRSLVLIPKALQPH- 200 (430)
T ss_dssp H-------------H-HHHHSHHHHHH--------------HHHHHHHHHHTTCCSCHHHHHHCCSSEEECSCGGGSTT-
T ss_pred h-------------h-hhccchHHHHH--------------HHHHHHHHHHhCCCCCHHHHhcCCCcEEEeCcHHhCCC-
Confidence 0 0 00000000000 0000000000 0001114678899998888765
Q ss_pred HHHHhhcCCCc-eeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCcCCCHHHHHHHHH
Q 012217 214 LNALSFMFPHH-LFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFMNKQQLIEVAM 292 (468)
Q Consensus 214 l~~~~~~~p~~-v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~ 292 (468)
...++++ +++|||+..... +..+|++..+++++||+++||+.....+.+.++++
T Consensus 201 ----~~~~~~~~v~~vG~~~~~~~---------------------~~~~~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~ 255 (430)
T 2iyf_A 201 ----ADRVDEDVYTFVGACQGDRA---------------------EEGGWQRPAGAEKVVLVSLGSAFTKQPAFYRECVR 255 (430)
T ss_dssp ----GGGSCTTTEEECCCCC--------------------------CCCCCCCTTCSEEEEEECTTTCC-CHHHHHHHHH
T ss_pred ----cccCCCccEEEeCCcCCCCC---------------------CCCCCccccCCCCeEEEEcCCCCCCcHHHHHHHHH
Confidence 2446666 999998653210 11246665556789999999998555778889999
Q ss_pred HHHcC-CCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHHHhcCCcEEec
Q 012217 293 GLVNS-NHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICW 371 (468)
Q Consensus 293 ~l~~~-~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~ 371 (468)
++++. +.+++|.++.+.. .+.+ +..++|+.+.+|+||.++|+++++ ||||||+||++||+++|+|+|++
T Consensus 256 ~l~~~~~~~~~~~~G~~~~-------~~~l-~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~~G~P~i~~ 325 (430)
T 2iyf_A 256 AFGNLPGWHLVLQIGRKVT-------PAEL-GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLATATPMIAV 325 (430)
T ss_dssp HHTTCTTEEEEEECC---C-------GGGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHHTTCCEEEC
T ss_pred HHhcCCCeEEEEEeCCCCC-------hHHh-ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHHhCCCEEEC
Confidence 99885 7888888875411 0111 123578999999999999999998 99999999999999999999999
Q ss_pred CCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Q 012217 372 PFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEE 435 (468)
Q Consensus 372 P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~ 435 (468)
|..+||+.|++++ ++.|+|+.+.. +.++.++|+++|+++++|+ +++++++++++++++
T Consensus 326 p~~~~q~~~a~~~-~~~g~g~~~~~--~~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~ 383 (430)
T 2iyf_A 326 PQAVDQFGNADML-QGLGVARKLAT--EEATADLLRETALALVDDP---EVARRLRRIQAEMAQ 383 (430)
T ss_dssp CCSHHHHHHHHHH-HHTTSEEECCC--C-CCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHH
T ss_pred CCccchHHHHHHH-HHcCCEEEcCC--CCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh
Confidence 9999999999999 66799998874 5679999999999999988 899999999988876
No 14
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=100.00 E-value=2e-34 Score=293.94 Aligned_cols=346 Identities=12% Similarity=0.113 Sum_probs=225.4
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCCCC--CC-------
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGLP--AS------- 80 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l~~~~~--~~------- 80 (468)
.|||+++++++.||++|++.||++|+++||+|+|++++.+.+.+.+. |++|+.++.... ..
T Consensus 20 ~mrIl~~~~~~~GHv~p~l~la~~L~~~GheV~~~~~~~~~~~v~~~----------G~~~~~i~~~~~~~~~~~~~~~~ 89 (441)
T 2yjn_A 20 HMRVVFSSMASKSHLFGLVPLAWAFRAAGHEVRVVASPALTEDITAA----------GLTAVPVGTDVDLVDFMTHAGHD 89 (441)
T ss_dssp CCEEEEECCSCHHHHTTTHHHHHHHHHTTCEEEEEECGGGHHHHHTT----------TCCEEECSCCCCHHHHHHHTTHH
T ss_pred ccEEEEEcCCCcchHhHHHHHHHHHHHCCCeEEEEeCchhHHHHHhC----------CCceeecCCccchHHHhhhhhcc
Confidence 47999999999999999999999999999999999998887777665 889988875420 00
Q ss_pred -------CCCC----CC-------------c----CC-CC---C-----------------CCcccchHHHHHHHcCCCe
Q 012217 81 -------SDES----PT-------------A----QD-AY---S-----------------LDGFLPFTITAAQQLGLPI 111 (468)
Q Consensus 81 -------~~~~----~~-------------~----~~-~~---~-----------------~D~~~~~~~~vA~~lgIP~ 111 (468)
. +. .. . .. +. . +|.+..++..+|+++|||+
T Consensus 90 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pDlVv~d~~~~~~~~aA~~lgiP~ 168 (441)
T 2yjn_A 90 IIDYVRSL-DFSERDPATLTWEHLLGMQTVLTPTFYALMSPDTLIEGMVSFCRKWRPDLVIWEPLTFAAPIAAAVTGTPH 168 (441)
T ss_dssp HHHHHTTC-CCTTCCGGGGSHHHHHHHHHHHHHHTTTTSSCHHHHHHHHHHHHHHCCSEEEECTTCTHHHHHHHHHTCCE
T ss_pred cccccccc-cccccCcchhhhhhhhhHHHHHHHHHHhhcchHHHHHHHHHHHHhcCCCEEEecCcchhHHHHHHHcCCCE
Confidence 0 00 00 0 00 10 1 6666678889999999999
Q ss_pred EEEccccHHHHHHHhhhhhhhhhCCCCccccccccccccccccccccccCCCccCccCccCcccccCCCchhHHHHHHHH
Q 012217 112 VLFFTISACSFMGFKQFQTFKEKGLFPVKVLADKSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEA 191 (468)
Q Consensus 112 v~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 191 (468)
+.+...+.........+.. . ....|... ......+.+...
T Consensus 169 v~~~~~~~~~~~~~~~~~~--------~-----------------~~~~~~~~---------------~~~~~~~~l~~~ 208 (441)
T 2yjn_A 169 ARLLWGPDITTRARQNFLG--------L-----------------LPDQPEEH---------------REDPLAEWLTWT 208 (441)
T ss_dssp EEECSSCCHHHHHHHHHHH--------H-----------------GGGSCTTT---------------CCCHHHHHHHHH
T ss_pred EEEecCCCcchhhhhhhhh--------h-----------------cccccccc---------------ccchHHHHHHHH
Confidence 9885433221110000000 0 00000000 001111112111
Q ss_pred HHhcc---------cCcEEEecchhhccHHHHHHHhhcCCCceeeeccccccccccccccccccccCCCccchhhhhhhc
Q 012217 192 TENAS---------KASAIIIHTFDALEQQVLNALSFMFPHHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQW 262 (468)
Q Consensus 192 ~~~~~---------~~~~~l~nt~~~le~p~l~~~~~~~p~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 262 (468)
.+... ..+..+..+.+.++++ ..+|. ..+++... ..+.++.+|
T Consensus 209 ~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~------~~~~~--~~~~~~~~--------------------~~~~~~~~~ 260 (441)
T 2yjn_A 209 LEKYGGPAFDEEVVVGQWTIDPAPAAIRLD------TGLKT--VGMRYVDY--------------------NGPSVVPEW 260 (441)
T ss_dssp HHHTTCCCCCGGGTSCSSEEECSCGGGSCC------CCCCE--EECCCCCC--------------------CSSCCCCGG
T ss_pred HHHcCCCCCCccccCCCeEEEecCccccCC------CCCCC--CceeeeCC--------------------CCCcccchH
Confidence 11111 1233444444444332 12221 11222110 011235679
Q ss_pred cccCCCCceEEEeecCCcCC---CHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHH
Q 012217 263 LDCKEPKSVIYVNFGSFIFM---NKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEE 339 (468)
Q Consensus 263 ld~~~~~~vv~vs~GS~~~~---~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~ 339 (468)
++..+++++|||++||+... ..+.+..+++++.+.+.+++|+.+... .+.+. ..++|+.+++|+||.+
T Consensus 261 l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~----~~~l~-----~~~~~v~~~~~~~~~~ 331 (441)
T 2yjn_A 261 LHDEPERRRVCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQ----LEGVA-----NIPDNVRTVGFVPMHA 331 (441)
T ss_dssp GSSCCSSCEEEEEC----------CCSTTTTHHHHHTSSSEEEECCCTTT----TSSCS-----SCCSSEEECCSCCHHH
T ss_pred hhcCCCCCEEEEECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcc----hhhhc-----cCCCCEEEecCCCHHH
Confidence 98766778999999998753 235577788999888999999987541 11121 1357999999999999
Q ss_pred hhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCchH
Q 012217 340 VLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKG 419 (468)
Q Consensus 340 il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~~ 419 (468)
+|+++++ ||||||+||++|++++|||+|++|+..||+.||+++ ++.|+|+.+.. +.++.++|.++|+++|+|+
T Consensus 332 ll~~ad~--~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l-~~~g~g~~~~~--~~~~~~~l~~~i~~ll~~~-- 404 (441)
T 2yjn_A 332 LLPTCAA--TVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRT-QEFGAGIALPV--PELTPDQLRESVKRVLDDP-- 404 (441)
T ss_dssp HGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHH-HHHTSEEECCT--TTCCHHHHHHHHHHHHHCH--
T ss_pred HHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHH-HHcCCEEEccc--ccCCHHHHHHHHHHHhcCH--
Confidence 9988888 999999999999999999999999999999999999 67799998874 5789999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHh
Q 012217 420 KQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEILL 456 (468)
Q Consensus 420 ~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~~~~~~ 456 (468)
+|+++++++++++++ .+ .. ..+.+.+.++..
T Consensus 405 -~~~~~~~~~~~~~~~---~~-~~-~~~~~~i~~~~~ 435 (441)
T 2yjn_A 405 -AHRAGAARMRDDMLA---EP-SP-AEVVGICEELAA 435 (441)
T ss_dssp -HHHHHHHHHHHHHHT---SC-CH-HHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHc---CC-CH-HHHHHHHHHHHH
Confidence 899999999999875 23 33 344444444443
No 15
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=100.00 E-value=3.4e-34 Score=286.80 Aligned_cols=311 Identities=14% Similarity=0.127 Sum_probs=218.6
Q ss_pred cEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCCCC------------C
Q 012217 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPDGL------------P 78 (468)
Q Consensus 11 ~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l~~~~------------~ 78 (468)
|||++++.++.||++|++.||++|+++||+|++++++...+.+... |+++..++... +
T Consensus 1 MrIl~~~~~~~Gh~~p~~~la~~L~~~Gh~V~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~~~~ 70 (384)
T 2p6p_A 1 MRILFVAAGSPATVFALAPLATAARNAGHQVVMAANQDMGPVVTGV----------GLPAVATTDLPIRHFITTDREGRP 70 (384)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHT----------TCCEEESCSSCHHHHHHBCTTSCB
T ss_pred CEEEEEeCCccchHhHHHHHHHHHHHCCCEEEEEeCHHHHHHHHhC----------CCEEEEeCCcchHHHHhhhcccCc
Confidence 4899999999999999999999999999999999998776666654 78888886532 0
Q ss_pred CCCCCC--CCc----CC-C--------CC--------------CCcccchHHHHHHHcCCCeEEEccccHHHHHHHhhhh
Q 012217 79 ASSDES--PTA----QD-A--------YS--------------LDGFLPFTITAAQQLGLPIVLFFTISACSFMGFKQFQ 129 (468)
Q Consensus 79 ~~~~~~--~~~----~~-~--------~~--------------~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~ 129 (468)
... +. ... .. + .. +|.+..++..+|+++|||++.+...+..
T Consensus 71 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~--------- 140 (384)
T 2p6p_A 71 EAI-PSDPVAQARFTGRWFARMAASSLPRMLDFSRAWRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD--------- 140 (384)
T ss_dssp CCC-CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC---------
T ss_pred ccc-CcchHHHHHHHHHHHHhhHHHHHHHHHHHHhccCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc---------
Confidence 000 00 000 00 0 00 4444445556666666666655321100
Q ss_pred hhhhhCCCCccccccccccccccccccccccCCCccCccCccCcccccCCCchhHHHHHHHHHHhc-----ccCcEEEec
Q 012217 130 TFKEKGLFPVKVLADKSCLTKEYLNSLIDWIPGMKDIRIRDLPSFIQSTDPKDMMFNLCVEATENA-----SKASAIIIH 204 (468)
Q Consensus 130 ~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~pg~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~n 204 (468)
..++ .......+....... ...+.++++
T Consensus 141 ------------------------------~~~~-----------------~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 173 (384)
T 2p6p_A 141 ------------------------------ADGI-----------------HPGADAELRPELSELGLERLPAPDLFIDI 173 (384)
T ss_dssp ------------------------------CTTT-----------------HHHHHHHTHHHHHHTTCSSCCCCSEEEEC
T ss_pred ------------------------------cchh-----------------hHHHHHHHHHHHHHcCCCCCCCCCeEEEE
Confidence 0000 000001111111110 115678899
Q ss_pred chhhccHHHHHHHhhcCC-CceeeeccccccccccccccccccccCCCccchhhhhhhccccCCCCceEEEeecCCcCC-
Q 012217 205 TFDALEQQVLNALSFMFP-HHLFTIGPLQLLLNQTEEQDGMLNSIGYNLLKEETECLQWLDCKEPKSVIYVNFGSFIFM- 282 (468)
Q Consensus 205 t~~~le~p~l~~~~~~~p-~~v~~VGpl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wld~~~~~~vv~vs~GS~~~~- 282 (468)
+.+.++++ ++ ++ .++.++++ . .+.++.+|++..+++++|||++||+...
T Consensus 174 ~~~~~~~~-----~~-~~~~~~~~~~~-~----------------------~~~~~~~~l~~~~~~~~v~v~~Gs~~~~~ 224 (384)
T 2p6p_A 174 CPPSLRPA-----NA-APARMMRHVAT-S----------------------RQCPLEPWMYTRDTRQRVLVTSGSRVAKE 224 (384)
T ss_dssp SCGGGSCT-----TS-CCCEECCCCCC-C----------------------CCCBCCHHHHCCCSSCEEEEECSSSSSCC
T ss_pred CCHHHCCC-----CC-CCCCceEecCC-C----------------------CCCCCCchhhcCCCCCEEEEECCCCCccc
Confidence 98888765 21 33 22444421 1 0113457888755678999999999764
Q ss_pred ----CHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhH
Q 012217 283 ----NKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSI 358 (468)
Q Consensus 283 ----~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~ 358 (468)
+.+.+..+++++++.+.+++|+.++. ..+.+ +..++|+.+ +|+||.++|+++++ ||||||+||+
T Consensus 225 ~~~~~~~~~~~~~~al~~~~~~~~~~~g~~--------~~~~l-~~~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~ 292 (384)
T 2p6p_A 225 SYDRNFDFLRGLAKDLVRWDVELIVAAPDT--------VAEAL-RAEVPQARV-GWTPLDVVAPTCDL--LVHHAGGVST 292 (384)
T ss_dssp SSCCCCTTHHHHHHHHHTTTCEEEEECCHH--------HHHHH-HHHCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHH
T ss_pred cccccHHHHHHHHHHHhcCCcEEEEEeCCC--------CHHhh-CCCCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHH
Confidence 44678889999999899999988742 11122 235689999 99999999988887 9999999999
Q ss_pred HHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Q 012217 359 VESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEE 435 (468)
Q Consensus 359 ~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~ 435 (468)
+||+++|+|+|++|...||+.||+++ ++.|+|+.+.. +.++.++|.++|+++|+|+ +++++++++++++++
T Consensus 293 ~Ea~~~G~P~v~~p~~~dq~~~a~~~-~~~g~g~~~~~--~~~~~~~l~~~i~~ll~~~---~~~~~~~~~~~~~~~ 363 (384)
T 2p6p_A 293 LTGLSAGVPQLLIPKGSVLEAPARRV-ADYGAAIALLP--GEDSTEAIADSCQELQAKD---TYARRAQDLSREISG 363 (384)
T ss_dssp HHHHHTTCCEEECCCSHHHHHHHHHH-HHHTSEEECCT--TCCCHHHHHHHHHHHHHCH---HHHHHHHHHHHHHHT
T ss_pred HHHHHhCCCEEEccCcccchHHHHHH-HHCCCeEecCc--CCCCHHHHHHHHHHHHcCH---HHHHHHHHHHHHHHh
Confidence 99999999999999999999999999 67799998874 5689999999999999998 899999999999986
No 16
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.97 E-value=7.8e-31 Score=263.68 Aligned_cols=160 Identities=14% Similarity=0.214 Sum_probs=122.4
Q ss_pred hhhccccCCCCceEEEeecCCcCC--------CHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCce
Q 012217 259 CLQWLDCKEPKSVIYVNFGSFIFM--------NKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGF 330 (468)
Q Consensus 259 ~~~wld~~~~~~vv~vs~GS~~~~--------~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (468)
+.+|+...+.+++|||++||+... ..+.+..+++++.+.+.+++|+.++.. .+.+ +..++|+.
T Consensus 217 ~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~--------~~~l-~~~~~~v~ 287 (398)
T 4fzr_A 217 VPSWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDKL--------AQTL-QPLPEGVL 287 (398)
T ss_dssp CCHHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGTCEEEECCCC-----------------CCTTEE
T ss_pred CchhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCEEEEEeCCcc--------hhhh-ccCCCcEE
Confidence 346776655678999999999643 234578899999888999998877541 1111 23468999
Q ss_pred EecccChHHhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHH
Q 012217 331 VASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLV 410 (468)
Q Consensus 331 v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av 410 (468)
+.+|+|+.++|+++++ ||||||.||+.||+++|+|+|++|...||..|+.++ ++.|+|+.+.. +.++++.|.++|
T Consensus 288 ~~~~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~-~~~g~g~~~~~--~~~~~~~l~~ai 362 (398)
T 4fzr_A 288 AAGQFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLL-HAAGAGVEVPW--EQAGVESVLAAC 362 (398)
T ss_dssp EESCCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHH-HHTTSEEECC---------CHHHHH
T ss_pred EeCcCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCchhHHHHHHHH-HHcCCEEecCc--ccCCHHHHHHHH
Confidence 9999999999999998 999999999999999999999999999999999999 67799999875 577999999999
Q ss_pred HHHhcCchHHHHHHHHHHHHHHHHH
Q 012217 411 REMMEGEKGKQMRNKAMEWKGLAEE 435 (468)
Q Consensus 411 ~~~l~~~~~~~~~~~a~~l~~~~~~ 435 (468)
.++|+|+ ++++++++.++++++
T Consensus 363 ~~ll~~~---~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 363 ARIRDDS---SYVGNARRLAAEMAT 384 (398)
T ss_dssp HHHHHCT---HHHHHHHHHHHHHTT
T ss_pred HHHHhCH---HHHHHHHHHHHHHHc
Confidence 9999999 899999999998775
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.97 E-value=7.9e-30 Score=256.39 Aligned_cols=156 Identities=13% Similarity=0.193 Sum_probs=130.1
Q ss_pred hhhccccCCCCceEEEeecCCcCC--CHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccC
Q 012217 259 CLQWLDCKEPKSVIYVNFGSFIFM--NKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCP 336 (468)
Q Consensus 259 ~~~wld~~~~~~vv~vs~GS~~~~--~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p 336 (468)
+.+|+...+.+++|||++||+... ..+.+..+++++++.+.+++|+.++.. .+.+ +..++|+.+.+|+|
T Consensus 222 ~~~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~--------~~~l-~~~~~~v~~~~~~~ 292 (398)
T 3oti_A 222 LGDRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLD--------ISPL-GTLPRNVRAVGWTP 292 (398)
T ss_dssp CCSSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSC--------CGGG-CSCCTTEEEESSCC
T ss_pred CchhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcC--------hhhh-ccCCCcEEEEccCC
Confidence 346776656778999999999543 456688899999988999999987541 1111 12357999999999
Q ss_pred hHHhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCCCcccch--hhheeeceeEEEEeCCCCCcchhHHHHHHHHHh
Q 012217 337 QEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNG--RYVCNEWGVGMEINGDDEDVIRNEVEKLVREMM 414 (468)
Q Consensus 337 ~~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na--~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l 414 (468)
+.++|+++++ ||||||+||++||+++|+|+|++|+..||..|| .++ ++.|+|+.+.. +..+.+.|+ ++|
T Consensus 293 ~~~ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~-~~~g~g~~~~~--~~~~~~~l~----~ll 363 (398)
T 3oti_A 293 LHTLLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAV-SRRGIGLVSTS--DKVDADLLR----RLI 363 (398)
T ss_dssp HHHHHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHH-HHHTSEEECCG--GGCCHHHHH----HHH
T ss_pred HHHHHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHH-HHCCCEEeeCC--CCCCHHHHH----HHH
Confidence 9999999988 999999999999999999999999999999999 998 67899999874 556777776 788
Q ss_pred cCchHHHHHHHHHHHHHHHHH
Q 012217 415 EGEKGKQMRNKAMEWKGLAEE 435 (468)
Q Consensus 415 ~~~~~~~~~~~a~~l~~~~~~ 435 (468)
+|+ +++++++++++++++
T Consensus 364 ~~~---~~~~~~~~~~~~~~~ 381 (398)
T 3oti_A 364 GDE---SLRTAAREVREEMVA 381 (398)
T ss_dssp HCH---HHHHHHHHHHHHHHT
T ss_pred cCH---HHHHHHHHHHHHHHh
Confidence 888 899999999999885
No 18
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.96 E-value=5.6e-29 Score=249.44 Aligned_cols=160 Identities=13% Similarity=0.196 Sum_probs=130.3
Q ss_pred hhccccCCCCceEEEeecCCcC--CC-HHHHHHHHHHHHcC-CCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEeccc
Q 012217 260 LQWLDCKEPKSVIYVNFGSFIF--MN-KQQLIEVAMGLVNS-NHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWC 335 (468)
Q Consensus 260 ~~wld~~~~~~vv~vs~GS~~~--~~-~~~~~~~~~~l~~~-~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 335 (468)
..|+...+.+++||+++||... .. .+.+..++++ ++. +.+++|+.++.. .+.+ +..++|+.+.+|+
T Consensus 209 ~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~----~~~l-----~~~~~~v~~~~~~ 278 (391)
T 3tsa_A 209 PAWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEH----RALL-----TDLPDNARIAESV 278 (391)
T ss_dssp CGGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGG----GGGC-----TTCCTTEEECCSC
T ss_pred CchhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcc----hhhc-----ccCCCCEEEeccC
Confidence 3677665567899999999843 23 6678888888 777 778888876531 1111 1235789999999
Q ss_pred ChHHhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhc
Q 012217 336 PQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMME 415 (468)
Q Consensus 336 p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~ 415 (468)
|+.++|+++++ ||||||.||++||+++|+|+|++|...||..|+.++ ++.|+|+.+.......+.+.|.++|.++|+
T Consensus 279 ~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~-~~~g~g~~~~~~~~~~~~~~l~~ai~~ll~ 355 (391)
T 3tsa_A 279 PLNLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNL-AAAGAGICLPDEQAQSDHEQFTDSIATVLG 355 (391)
T ss_dssp CGGGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHH-HHTTSEEECCSHHHHTCHHHHHHHHHHHHT
T ss_pred CHHHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCcccHHHHHHHH-HHcCCEEecCcccccCCHHHHHHHHHHHHc
Confidence 99999988888 999999999999999999999999999999999999 677999988610013789999999999999
Q ss_pred CchHHHHHHHHHHHHHHHHH
Q 012217 416 GEKGKQMRNKAMEWKGLAEE 435 (468)
Q Consensus 416 ~~~~~~~~~~a~~l~~~~~~ 435 (468)
|+ +++++++++++.+.+
T Consensus 356 ~~---~~~~~~~~~~~~~~~ 372 (391)
T 3tsa_A 356 DT---GFAAAAIKLSDEITA 372 (391)
T ss_dssp CT---HHHHHHHHHHHHHHT
T ss_pred CH---HHHHHHHHHHHHHHc
Confidence 99 899999999988875
No 19
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.95 E-value=1.5e-27 Score=240.60 Aligned_cols=160 Identities=21% Similarity=0.351 Sum_probs=134.3
Q ss_pred hhc-cccCCCCceEEEeecCCcCCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChH
Q 012217 260 LQW-LDCKEPKSVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQE 338 (468)
Q Consensus 260 ~~w-ld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~ 338 (468)
.+| ....+++++||+++||......+.+.++++++.+.+..++|+.+.... .+.+. ..++|+.+.+|+|+.
T Consensus 232 ~~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~---~~~l~-----~~~~~v~~~~~~~~~ 303 (412)
T 3otg_A 232 PAWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDADVLVASGPSLD---VSGLG-----EVPANVRLESWVPQA 303 (412)
T ss_dssp CGGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHHTSSSEEEEECCSSCC---CTTCC-----CCCTTEEEESCCCHH
T ss_pred CCccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHHcCCCEEEEEECCCCC---hhhhc-----cCCCcEEEeCCCCHH
Confidence 356 232345679999999997556788999999999888999999876421 11111 135789999999999
Q ss_pred HhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCch
Q 012217 339 EVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEK 418 (468)
Q Consensus 339 ~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~ 418 (468)
.+|+++++ ||+|||+||++||+++|+|+|++|...||..|+..+ ++.|+|+.+.. +.+++++|+++|.++|+|+
T Consensus 304 ~~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v-~~~g~g~~~~~--~~~~~~~l~~ai~~ll~~~- 377 (412)
T 3otg_A 304 ALLPHVDL--VVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAV-AQAGAGDHLLP--DNISPDSVSGAAKRLLAEE- 377 (412)
T ss_dssp HHGGGCSE--EEESCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HHHTSEEECCG--GGCCHHHHHHHHHHHHHCH-
T ss_pred HHHhcCcE--EEECCchHHHHHHHHhCCCEEecCCchhHHHHHHHH-HHcCCEEecCc--ccCCHHHHHHHHHHHHhCH-
Confidence 99999998 999999999999999999999999999999999999 66799999874 5679999999999999998
Q ss_pred HHHHHHHHHHHHHHHHH
Q 012217 419 GKQMRNKAMEWKGLAEE 435 (468)
Q Consensus 419 ~~~~~~~a~~l~~~~~~ 435 (468)
++++++.+.++++.+
T Consensus 378 --~~~~~~~~~~~~~~~ 392 (412)
T 3otg_A 378 --SYRAGARAVAAEIAA 392 (412)
T ss_dssp --HHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHhc
Confidence 899999988888876
No 20
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.94 E-value=4.6e-27 Score=207.66 Aligned_cols=162 Identities=20% Similarity=0.409 Sum_probs=137.8
Q ss_pred hhhhhhhccccCCCCceEEEeecCCc-CCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEec
Q 012217 255 EETECLQWLDCKEPKSVIYVNFGSFI-FMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVAS 333 (468)
Q Consensus 255 ~~~~~~~wld~~~~~~vv~vs~GS~~-~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 333 (468)
.++++.+|++..+++++|||++||.. ....+.+..+++++++.+.+++|+.+... ++ ..++|+.+.+
T Consensus 7 l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~--------~~----~~~~~v~~~~ 74 (170)
T 2o6l_A 7 LPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNK--------PD----TLGLNTRLYK 74 (170)
T ss_dssp CCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSC--------CT----TCCTTEEEES
T ss_pred CCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcC--------cc----cCCCcEEEec
Confidence 45678899987767789999999996 45677889999999988899999987541 11 1257899999
Q ss_pred ccChHHhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHH
Q 012217 334 WCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREM 413 (468)
Q Consensus 334 ~~p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~ 413 (468)
|+||.+++.|+++.+||||||+||++|++++|+|+|++|...||..||+++ ++.|+|+.+.. +.++.++|.++|.++
T Consensus 75 ~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l-~~~g~g~~~~~--~~~~~~~l~~~i~~l 151 (170)
T 2o6l_A 75 WIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHM-KARGAAVRVDF--NTMSSTDLLNALKRV 151 (170)
T ss_dssp SCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHH-HTTTSEEECCT--TTCCHHHHHHHHHHH
T ss_pred CCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHH-HHcCCeEEecc--ccCCHHHHHHHHHHH
Confidence 999999997777777999999999999999999999999999999999999 67799999874 578999999999999
Q ss_pred hcCchHHHHHHHHHHHHHHHH
Q 012217 414 MEGEKGKQMRNKAMEWKGLAE 434 (468)
Q Consensus 414 l~~~~~~~~~~~a~~l~~~~~ 434 (468)
++|+ +|+++++++++.++
T Consensus 152 l~~~---~~~~~a~~~~~~~~ 169 (170)
T 2o6l_A 152 INDP---SYKENVMKLSRIQH 169 (170)
T ss_dssp HHCH---HHHHHHHHHC----
T ss_pred HcCH---HHHHHHHHHHHHhh
Confidence 9988 89999999999876
No 21
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.91 E-value=4.5e-23 Score=204.55 Aligned_cols=147 Identities=13% Similarity=0.122 Sum_probs=107.8
Q ss_pred CCceEEEeecCCcCCCHHHHHHHHHHHHcC----CCCEEEEEcCCCCCCCCCCCchhHH---HHhhcCceEecccChH-H
Q 012217 268 PKSVIYVNFGSFIFMNKQQLIEVAMGLVNS----NHPFLWIIRPDLVTGETADLPAEFE---VKAKEKGFVASWCPQE-E 339 (468)
Q Consensus 268 ~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~----~~~~lw~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~p~~-~ 339 (468)
.+++|+|..||....... +.+.++++.. +..++|..+.. ..+... ...+.++.+.+|+++. .
T Consensus 179 ~~~~ilv~gGs~g~~~~~--~~~~~al~~l~~~~~~~vi~~~G~~--------~~~~~~~~~~~~~~~~~v~~f~~dm~~ 248 (365)
T 3s2u_A 179 RRVNLLVLGGSLGAEPLN--KLLPEALAQVPLEIRPAIRHQAGRQ--------HAEITAERYRTVAVEADVAPFISDMAA 248 (365)
T ss_dssp SCCEEEECCTTTTCSHHH--HHHHHHHHTSCTTTCCEEEEECCTT--------THHHHHHHHHHTTCCCEEESCCSCHHH
T ss_pred CCcEEEEECCcCCccccc--hhhHHHHHhcccccceEEEEecCcc--------ccccccceecccccccccccchhhhhh
Confidence 456999999998754322 2344555433 34566666643 112222 2345688899999985 6
Q ss_pred hhcCCCcceeeeccChhhHHHHHhcCCcEEecCCC----CCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhc
Q 012217 340 VLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFT----GDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMME 415 (468)
Q Consensus 340 il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~----~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~ 415 (468)
++..+++ +|||+|.+|+.|++++|+|+|.+|+- .+|..||+.+ ++.|+|+.+.. +.++++.|.++|.++++
T Consensus 249 ~l~~aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l-~~~G~a~~l~~--~~~~~~~L~~~i~~ll~ 323 (365)
T 3s2u_A 249 AYAWADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFL-VRSGAGRLLPQ--KSTGAAELAAQLSEVLM 323 (365)
T ss_dssp HHHHCSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHH-HTTTSEEECCT--TTCCHHHHHHHHHHHHH
T ss_pred hhccceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHH-HHCCCEEEeec--CCCCHHHHHHHHHHHHC
Confidence 9999998 99999999999999999999999973 4799999999 56699999974 67899999999999999
Q ss_pred CchH-HHHHHHHHHH
Q 012217 416 GEKG-KQMRNKAMEW 429 (468)
Q Consensus 416 ~~~~-~~~~~~a~~l 429 (468)
|++. ++|+++|+++
T Consensus 324 d~~~~~~m~~~a~~~ 338 (365)
T 3s2u_A 324 HPETLRSMADQARSL 338 (365)
T ss_dssp CTHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHhc
Confidence 8832 3455555443
No 22
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.68 E-value=3.5e-15 Score=147.17 Aligned_cols=166 Identities=11% Similarity=0.033 Sum_probs=110.4
Q ss_pred CCceEEEeecCCcCCCHHHHHHHHHHHHcC--CCCEEEEEcCCCCCCCCCCCchhHHH---Hhh-cCceEecccCh-HHh
Q 012217 268 PKSVIYVNFGSFIFMNKQQLIEVAMGLVNS--NHPFLWIIRPDLVTGETADLPAEFEV---KAK-EKGFVASWCPQ-EEV 340 (468)
Q Consensus 268 ~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~--~~~~lw~~~~~~~~~~~~~~~~~~~~---~~~-~~~~v~~~~p~-~~i 340 (468)
++++|++..|+... ......++++++.. +.++++.++.+. .+.+.+ +.+ +|+.+.+|+++ ..+
T Consensus 182 ~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~--------~~~l~~~~~~~~~~~v~~~g~~~~~~~~ 251 (364)
T 1f0k_A 182 GPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGS--------QQSVEQAYAEAGQPQHKVTEFIDDMAAA 251 (364)
T ss_dssp SSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTC--------HHHHHHHHHHTTCTTSEEESCCSCHHHH
T ss_pred CCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCch--------HHHHHHHHhhcCCCceEEecchhhHHHH
Confidence 34578888888753 33334444555433 456677776541 123322 222 57889999854 679
Q ss_pred hcCCCcceeeeccChhhHHHHHhcCCcEEecCCC---CCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCc
Q 012217 341 LKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFT---GDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGE 417 (468)
Q Consensus 341 l~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~---~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~ 417 (468)
+..+++ ||+++|.+++.||+++|+|+|+.|.. .||..|++.+ .+.|.|+.+.. +..+.++++++|.++ |+
T Consensus 252 ~~~ad~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~-~~~g~g~~~~~--~d~~~~~la~~i~~l--~~ 324 (364)
T 1f0k_A 252 YAWADV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPL-EKAGAAKIIEQ--PQLSVDAVANTLAGW--SR 324 (364)
T ss_dssp HHHCSE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHH-HHTTSEEECCG--GGCCHHHHHHHHHTC--CH
T ss_pred HHhCCE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHH-HhCCcEEEecc--ccCCHHHHHHHHHhc--CH
Confidence 999998 99999999999999999999999997 6899999998 45588987764 456699999999988 55
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHhc
Q 012217 418 KGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEILLS 457 (468)
Q Consensus 418 ~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~~~~~~~ 457 (468)
+.+++..+-+.+. .+..+.+...+.+.+.+.+.
T Consensus 325 ---~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~y~~~ 357 (364)
T 1f0k_A 325 ---ETLLTMAERARAA----SIPDATERVANEVSRVARAL 357 (364)
T ss_dssp ---HHHHHHHHHHHHT----CCTTHHHHHHHHHHHHHTTC
T ss_pred ---HHHHHHHHHHHHh----hccCHHHHHHHHHHHHHHHH
Confidence 3433333222221 12344445555555555444
No 23
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.50 E-value=1.9e-14 Score=130.78 Aligned_cols=131 Identities=13% Similarity=0.135 Sum_probs=93.8
Q ss_pred CCCceEEEeecCCcCCCHHHHHHH-----HHHHHcCC-CCEEEEEcCCCCCCCCCCCchhHHHHh---------h-----
Q 012217 267 EPKSVIYVNFGSFIFMNKQQLIEV-----AMGLVNSN-HPFLWIIRPDLVTGETADLPAEFEVKA---------K----- 326 (468)
Q Consensus 267 ~~~~vv~vs~GS~~~~~~~~~~~~-----~~~l~~~~-~~~lw~~~~~~~~~~~~~~~~~~~~~~---------~----- 326 (468)
+++++|||+.||.... .+.+..+ +++|.+.+ .+++|.++..... ..+.+.... +
T Consensus 26 ~~~~~VlVtgGS~~~~-n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~-----~~~~~~~~~~~~~~~~l~p~~~~~ 99 (224)
T 2jzc_A 26 IEEKALFVTCGATVPF-PKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSS-----EFEHLVQERGGQRESQKIPIDQFG 99 (224)
T ss_dssp CCSCCEEEECCSCCSC-HHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCC-----CCCSHHHHHTCEECSCCCSSCTTC
T ss_pred CCCCEEEEEcCCchHH-HHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchh-----hHHHHHHhhhcccccccccccccc
Confidence 4567999999998432 3444443 48888777 7899998865210 011111111 1
Q ss_pred ------------c--CceEecccChH-Hhhc-CCCcceeeeccChhhHHHHHhcCCcEEecCCC----CCcccchhhhee
Q 012217 327 ------------E--KGFVASWCPQE-EVLK-HPSIGGFLTHCGWNSIVESLCSGVPMICWPFT----GDQPTNGRYVCN 386 (468)
Q Consensus 327 ------------~--~~~v~~~~p~~-~il~-~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~----~DQ~~na~~~~~ 386 (468)
. ++.+.+|+++. .+|+ .+++ +|||||+||++|++++|+|+|++|.. .||..||+++ +
T Consensus 100 ~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l-~ 176 (224)
T 2jzc_A 100 CGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKF-V 176 (224)
T ss_dssp TTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHH-H
T ss_pred ccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHH-H
Confidence 1 33456787875 7999 9999 99999999999999999999999984 3599999999 6
Q ss_pred eceeEEEEeCCCCCcchhHHHHHHHHH
Q 012217 387 EWGVGMEINGDDEDVIRNEVEKLVREM 413 (468)
Q Consensus 387 ~~g~g~~~~~~~~~~~~~~l~~av~~~ 413 (468)
+.|.++.+ +.+.|.++|+++
T Consensus 177 ~~G~~~~~-------~~~~L~~~i~~l 196 (224)
T 2jzc_A 177 ELGYVWSC-------APTETGLIAGLR 196 (224)
T ss_dssp HHSCCCEE-------CSCTTTHHHHHH
T ss_pred HCCCEEEc-------CHHHHHHHHHHH
Confidence 66988654 456777777776
No 24
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=98.80 E-value=1.2e-08 Score=96.20 Aligned_cols=114 Identities=10% Similarity=0.073 Sum_probs=86.5
Q ss_pred CceEEEeecCCcCCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHh--hcCceEecccChH-HhhcCCC
Q 012217 269 KSVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKA--KEKGFVASWCPQE-EVLKHPS 345 (468)
Q Consensus 269 ~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~p~~-~il~~~~ 345 (468)
.+.|+|++|...... ....++++|.... ++.++.+.+. ...+.+.+.. ..|+.+..|+++. .++..++
T Consensus 157 ~~~ILv~~GG~d~~~--l~~~vl~~L~~~~-~i~vv~G~~~------~~~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aD 227 (282)
T 3hbm_A 157 KYDFFICMGGTDIKN--LSLQIASELPKTK-IISIATSSSN------PNLKKLQKFAKLHNNIRLFIDHENIAKLMNESN 227 (282)
T ss_dssp CEEEEEECCSCCTTC--HHHHHHHHSCTTS-CEEEEECTTC------TTHHHHHHHHHTCSSEEEEESCSCHHHHHHTEE
T ss_pred CCeEEEEECCCchhh--HHHHHHHHhhcCC-CEEEEECCCc------hHHHHHHHHHhhCCCEEEEeCHHHHHHHHHHCC
Confidence 458999998764332 4556777776544 5777777542 1223333222 2478899999886 5899999
Q ss_pred cceeeeccChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEe
Q 012217 346 IGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEIN 395 (468)
Q Consensus 346 ~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~ 395 (468)
+ +||+|| +|++|+++.|+|+|.+|...+|..||+.+ ++.|+++.+.
T Consensus 228 l--vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l-~~~G~~~~~~ 273 (282)
T 3hbm_A 228 K--LIISAS-SLVNEALLLKANFKAICYVKNQESTATWL-AKKGYEVEYK 273 (282)
T ss_dssp E--EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHH-HHTTCEEECG
T ss_pred E--EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHH-HHCCCEEEcc
Confidence 8 999999 89999999999999999999999999999 6679998886
No 25
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=98.79 E-value=1.3e-06 Score=86.18 Aligned_cols=162 Identities=12% Similarity=0.123 Sum_probs=98.0
Q ss_pred CceEEEeecCCcC-CCHHHHHHHHHHHHcC--CCCEEEEEcCCCCCCCCCCCchhHHH---HhhcCceEecccChHH---
Q 012217 269 KSVIYVNFGSFIF-MNKQQLIEVAMGLVNS--NHPFLWIIRPDLVTGETADLPAEFEV---KAKEKGFVASWCPQEE--- 339 (468)
Q Consensus 269 ~~vv~vs~GS~~~-~~~~~~~~~~~~l~~~--~~~~lw~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~p~~~--- 339 (468)
+..+++..|+... ...+.+.+.+..+.+. +.+++ .++.+. ..+.+.+ .+.+++.+.+|+|+.+
T Consensus 197 ~~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~-i~G~g~-------~~~~l~~~~~~~~~~v~~~g~~~~~~~~~ 268 (394)
T 3okp_A 197 TTPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLL-IVGSGR-------YESTLRRLATDVSQNVKFLGRLEYQDMIN 268 (394)
T ss_dssp TCCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEE-EECCCT-------THHHHHHHTGGGGGGEEEEESCCHHHHHH
T ss_pred CceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEE-EEcCch-------HHHHHHHHHhcccCeEEEcCCCCHHHHHH
Confidence 3467777888752 2344444444444332 34444 344321 1122222 2347899999998654
Q ss_pred hhcCCCcceeee-----------ccChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHH
Q 012217 340 VLKHPSIGGFLT-----------HCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEK 408 (468)
Q Consensus 340 il~~~~~~~~v~-----------hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~ 408 (468)
++..+++ +|. -|.-+++.||+++|+|+|+.+. ......+ +. |.|+.+. .-+.+++++
T Consensus 269 ~~~~ad~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i-~~-~~g~~~~----~~d~~~l~~ 336 (394)
T 3okp_A 269 TLAAADI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTS----GGAPETV-TP-ATGLVVE----GSDVDKLSE 336 (394)
T ss_dssp HHHHCSE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSS----TTGGGGC-CT-TTEEECC----TTCHHHHHH
T ss_pred HHHhCCE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCC----CChHHHH-hc-CCceEeC----CCCHHHHHH
Confidence 7888888 665 4445789999999999999764 3333344 44 4677665 347999999
Q ss_pred HHHHHhcCch-HHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHhc
Q 012217 409 LVREMMEGEK-GKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEILLS 457 (468)
Q Consensus 409 av~~~l~~~~-~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~~~~~~~ 457 (468)
+|.++++|++ .+++.+++++..+. .-+.....+++.+.+.+.
T Consensus 337 ~i~~l~~~~~~~~~~~~~~~~~~~~-------~~s~~~~~~~~~~~~~~~ 379 (394)
T 3okp_A 337 LLIELLDDPIRRAAMGAAGRAHVEA-------EWSWEIMGERLTNILQSE 379 (394)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHHHHH-------HTBHHHHHHHHHHHHHSC
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHH-------hCCHHHHHHHHHHHHHHh
Confidence 9999998773 23455555544332 124445555666555554
No 26
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=98.71 E-value=1e-05 Score=81.15 Aligned_cols=170 Identities=15% Similarity=0.159 Sum_probs=100.8
Q ss_pred ceEEEeecCCcCC-CHHHHHHHHHHHHcC--CCCE-EEEEcCCCCCCCCCCCchhHHH---H--hhcCceEecccChH--
Q 012217 270 SVIYVNFGSFIFM-NKQQLIEVAMGLVNS--NHPF-LWIIRPDLVTGETADLPAEFEV---K--AKEKGFVASWCPQE-- 338 (468)
Q Consensus 270 ~vv~vs~GS~~~~-~~~~~~~~~~~l~~~--~~~~-lw~~~~~~~~~~~~~~~~~~~~---~--~~~~~~v~~~~p~~-- 338 (468)
..+++..|+.... ..+.+.+.+..+.+. +..+ ++.++.....+ ...+.+.+ + +.+++.+.+|+|+.
T Consensus 243 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~p~~~~~l~i~G~~~~~g---~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~ 319 (438)
T 3c48_A 243 TKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPN---ATPDTYRHMAEELGVEKRIRFLDPRPPSEL 319 (438)
T ss_dssp SEEEEEESCBSGGGCHHHHHHHHHHHHHHCTTCSEEEEEECCBC---------CHHHHHHHHTTCTTTEEEECCCCHHHH
T ss_pred CcEEEEEeeecccCCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCC---cHHHHHHHHHHHcCCCCcEEEcCCCChHHH
Confidence 4667777887532 344444444444332 1133 33444311001 11122222 2 23688899999874
Q ss_pred -HhhcCCCcceeeecc---C-hhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHH
Q 012217 339 -EVLKHPSIGGFLTHC---G-WNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREM 413 (468)
Q Consensus 339 -~il~~~~~~~~v~hg---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~ 413 (468)
.++..+++ ||.-. | -+++.||+++|+|+|+.+. ......+ +.-+.|+.+. .-+.++++++|.++
T Consensus 320 ~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~~----~~d~~~la~~i~~l 388 (438)
T 3c48_A 320 VAVYRAADI--VAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAV-AEGETGLLVD----GHSPHAWADALATL 388 (438)
T ss_dssp HHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHS-CBTTTEEEES----SCCHHHHHHHHHHH
T ss_pred HHHHHhCCE--EEECccccCCchHHHHHHHcCCCEEecCC----CChhHHh-hCCCcEEECC----CCCHHHHHHHHHHH
Confidence 57888888 66543 2 4689999999999999754 3344444 5545777775 34799999999999
Q ss_pred hcCch-HHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHhcC
Q 012217 414 MEGEK-GKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEILLSN 458 (468)
Q Consensus 414 l~~~~-~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~~~~~~~~ 458 (468)
++|++ .+.+.+++++..+.+.-. .....+.++.+++....
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~s~~-----~~~~~~~~~~~~~~~~~ 429 (438)
T 3c48_A 389 LDDDETRIRMGEDAVEHARTFSWA-----ATAAQLSSLYNDAIANE 429 (438)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHTC
T ss_pred HcCHHHHHHHHHHHHHHHHhCCHH-----HHHHHHHHHHHHHhhhc
Confidence 98864 356677777766653321 23345556666665554
No 27
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=98.54 E-value=7.5e-06 Score=81.04 Aligned_cols=140 Identities=10% Similarity=0.100 Sum_probs=86.9
Q ss_pred eEEEeecCC-cC-CCHHHHHHHHHHHHcC--CCCEEEEEcCCCCCCCCCCCchhHHHH---hhcCceEecccChH---Hh
Q 012217 271 VIYVNFGSF-IF-MNKQQLIEVAMGLVNS--NHPFLWIIRPDLVTGETADLPAEFEVK---AKEKGFVASWCPQE---EV 340 (468)
Q Consensus 271 vv~vs~GS~-~~-~~~~~~~~~~~~l~~~--~~~~lw~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~p~~---~i 340 (468)
.+++..|+. .. -..+.+.+.+..+.+. +.+ +..++.+. . +.+.+. ..+++.+.+|+++. .+
T Consensus 209 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~-l~i~G~~~-------~-~~l~~~~~~~~~~v~~~g~~~~~~~~~~ 279 (406)
T 2gek_A 209 RTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVE-ILIVGRGD-------E-DELREQAGDLAGHLRFLGQVDDATKASA 279 (406)
T ss_dssp CEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCE-EEEESCSC-------H-HHHHHHTGGGGGGEEECCSCCHHHHHHH
T ss_pred eEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeE-EEEEcCCc-------H-HHHHHHHHhccCcEEEEecCCHHHHHHH
Confidence 567777887 43 2344444444445443 333 33444321 1 233322 24688899999975 68
Q ss_pred hcCCCcceeee----ccCh-hhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhc
Q 012217 341 LKHPSIGGFLT----HCGW-NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMME 415 (468)
Q Consensus 341 l~~~~~~~~v~----hgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~ 415 (468)
+..+++ +|. +-|+ +++.||+++|+|+|+.+. ......+ +..+.|+.+. .-+.++++++|.++++
T Consensus 280 ~~~adv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i-~~~~~g~~~~----~~d~~~l~~~i~~l~~ 348 (406)
T 2gek_A 280 MRSADV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVL-ADGDAGRLVP----VDDADGMAAALIGILE 348 (406)
T ss_dssp HHHSSE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHH-TTTTSSEECC----TTCHHHHHHHHHHHHH
T ss_pred HHHCCE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHh-cCCCceEEeC----CCCHHHHHHHHHHHHc
Confidence 888988 653 3344 589999999999999855 3444445 4435676664 3478999999999998
Q ss_pred Cch-HHHHHHHHHHHH
Q 012217 416 GEK-GKQMRNKAMEWK 430 (468)
Q Consensus 416 ~~~-~~~~~~~a~~l~ 430 (468)
|++ .+.+.+++++..
T Consensus 349 ~~~~~~~~~~~~~~~~ 364 (406)
T 2gek_A 349 DDQLRAGYVARASERV 364 (406)
T ss_dssp CHHHHHHHHHHHHHHG
T ss_pred CHHHHHHHHHHHHHHH
Confidence 773 233444444443
No 28
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=98.45 E-value=1.2e-05 Score=82.26 Aligned_cols=96 Identities=14% Similarity=0.122 Sum_probs=66.6
Q ss_pred hcCceEecccChH---HhhcCC----Ccceeeecc---Ch-hhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEE
Q 012217 326 KEKGFVASWCPQE---EVLKHP----SIGGFLTHC---GW-NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEI 394 (468)
Q Consensus 326 ~~~~~v~~~~p~~---~il~~~----~~~~~v~hg---G~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~ 394 (468)
.+++.+.+++|+. .++..+ ++ ||.-. |+ +++.||+++|+|+|+... ......+ +.-..|+.+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v-~~~~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEIL-DGGKYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHT-GGGTSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHh-cCCceEEEe
Confidence 3678899999865 477778 77 66322 33 689999999999999853 3344444 443467777
Q ss_pred eCCCCCcchhHHHHHHHHHhcCch-HHHHHHHHHHHHHH
Q 012217 395 NGDDEDVIRNEVEKLVREMMEGEK-GKQMRNKAMEWKGL 432 (468)
Q Consensus 395 ~~~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l~~~ 432 (468)
. .-+.++++++|.++++|++ .+++.+++++..+.
T Consensus 407 ~----~~d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~~ 441 (499)
T 2r60_A 407 D----PEDPEDIARGLLKAFESEETWSAYQEKGKQRVEE 441 (499)
T ss_dssp C----TTCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred C----CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 5 3578999999999998873 24555555554443
No 29
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=98.35 E-value=0.00019 Score=71.52 Aligned_cols=161 Identities=14% Similarity=0.097 Sum_probs=98.3
Q ss_pred eEEEeecCCc-CC-CHHHHHHHHHHHHcC----CCCEEEEEcCCCCCCCCCCCchhH---HHHhhcCceEecccChHH--
Q 012217 271 VIYVNFGSFI-FM-NKQQLIEVAMGLVNS----NHPFLWIIRPDLVTGETADLPAEF---EVKAKEKGFVASWCPQEE-- 339 (468)
Q Consensus 271 vv~vs~GS~~-~~-~~~~~~~~~~~l~~~----~~~~lw~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~p~~~-- 339 (468)
.+++..|+.. .. ..+.+.+.+..+.+. +.+++ .+|.+. . ...+.+ .++.++++.+.+|+++.+
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~-i~G~g~----~-~~~~~l~~~~~~~~~~~~~~g~~~~~~~~ 325 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFI-IIGKGD----P-ELEGWARSLEEKHGNVKVITEMLSREFVR 325 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEE-EECCCC----H-HHHHHHHHHHHHCTTEEEECSCCCHHHHH
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEE-EEcCCC----h-hHHHHHHHHHhhcCCEEEEcCCCCHHHHH
Confidence 7788888886 33 455555666666553 33333 334321 0 000111 222333445567898854
Q ss_pred -hhcCCCcceeeec---cC-hhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHh
Q 012217 340 -VLKHPSIGGFLTH---CG-WNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMM 414 (468)
Q Consensus 340 -il~~~~~~~~v~h---gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l 414 (468)
++..+++ +|.- -| -+++.||+++|+|+|+... ......+ +. |.|+.+. .-+.++++++|.+++
T Consensus 326 ~~~~~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~-~~-~~g~~~~----~~d~~~la~~i~~ll 393 (439)
T 3fro_A 326 ELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-TN-ETGILVK----AGDPGELANAILKAL 393 (439)
T ss_dssp HHHTTCSE--EEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHC-CT-TTCEEEC----TTCHHHHHHHHHHHH
T ss_pred HHHHHCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeE-Ec-CceEEeC----CCCHHHHHHHHHHHH
Confidence 7888888 6633 23 3789999999999999743 3344444 44 6787776 357999999999999
Q ss_pred c-Cch-HHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHhc
Q 012217 415 E-GEK-GKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEILLS 457 (468)
Q Consensus 415 ~-~~~-~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~~~~~~~ 457 (468)
+ |++ .+.+.+++++..+. -+.....+++.+.+.+.
T Consensus 394 ~~~~~~~~~~~~~~~~~~~~--------~s~~~~~~~~~~~~~~~ 430 (439)
T 3fro_A 394 ELSRSDLSKFRENCKKRAMS--------FSWEKSAERYVKAYTGS 430 (439)
T ss_dssp HHTTTTTHHHHHHHHHHHHT--------SCHHHHHHHHHHHHHTC
T ss_pred hcCHHHHHHHHHHHHHHHhh--------CcHHHHHHHHHHHHHHH
Confidence 8 653 35666666665532 35556666666666554
No 30
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.30 E-value=3.3e-06 Score=73.76 Aligned_cols=140 Identities=8% Similarity=0.011 Sum_probs=87.2
Q ss_pred eEEEeecCCcCCCHHHHHHHHHHHHcC-CCCEEEEEcCCCCCCCCCCCchhHH---HHhhcCceEecccCh---HHhhcC
Q 012217 271 VIYVNFGSFIFMNKQQLIEVAMGLVNS-NHPFLWIIRPDLVTGETADLPAEFE---VKAKEKGFVASWCPQ---EEVLKH 343 (468)
Q Consensus 271 vv~vs~GS~~~~~~~~~~~~~~~l~~~-~~~~lw~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~p~---~~il~~ 343 (468)
.+++..|+... .+.+..++++++.. +.+++++ +.... ...+..... ..+++|+.+.+|+++ ..++..
T Consensus 24 ~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~-G~~~~---~~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~ 97 (177)
T 2f9f_A 24 DFWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIV-GWFSK---GDHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSR 97 (177)
T ss_dssp SCEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEE-BCCCT---TSTHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHH
T ss_pred CEEEEEecccc--ccCHHHHHHHHHhCCCcEEEEE-ecCcc---HHHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHh
Confidence 45666777753 23355666777665 4555544 43211 111111111 123458999999998 568888
Q ss_pred CCcceeee---ccCh-hhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCchH
Q 012217 344 PSIGGFLT---HCGW-NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGEKG 419 (468)
Q Consensus 344 ~~~~~~v~---hgG~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~~~ 419 (468)
+++ +|. +-|+ +++.||+++|+|+|+... ..+...+ +..+.|+.+ . -+.++++++|.++++|++
T Consensus 98 adi--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i-~~~~~g~~~-~----~d~~~l~~~i~~l~~~~~- 164 (177)
T 2f9f_A 98 CKG--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETV-INEKTGYLV-N----ADVNEIIDAMKKVSKNPD- 164 (177)
T ss_dssp CSE--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHC-CBTTTEEEE-C----SCHHHHHHHHHHHHHCTT-
T ss_pred CCE--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHh-cCCCccEEe-C----CCHHHHHHHHHHHHhCHH-
Confidence 888 665 3344 489999999999999754 4444455 444567666 3 378999999999998773
Q ss_pred HHHHHHHHHHH
Q 012217 420 KQMRNKAMEWK 430 (468)
Q Consensus 420 ~~~~~~a~~l~ 430 (468)
.+++++++.+
T Consensus 165 -~~~~~~~~~a 174 (177)
T 2f9f_A 165 -KFKKDCFRRA 174 (177)
T ss_dssp -TTHHHHHHHH
T ss_pred -HHHHHHHHHH
Confidence 2244444433
No 31
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=98.24 E-value=0.0017 Score=63.73 Aligned_cols=142 Identities=13% Similarity=0.127 Sum_probs=86.0
Q ss_pred ceEEEeecCCcC-CCHHHHHHHHHHHHcC-CCCEEEEEcCCCCCCCCCCCchhHHHHh-----hcCceEecccCh-HHhh
Q 012217 270 SVIYVNFGSFIF-MNKQQLIEVAMGLVNS-NHPFLWIIRPDLVTGETADLPAEFEVKA-----KEKGFVASWCPQ-EEVL 341 (468)
Q Consensus 270 ~vv~vs~GS~~~-~~~~~~~~~~~~l~~~-~~~~lw~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~p~-~~il 341 (468)
..+++..|.... ...+.+.+.+..+.+. +.+ ++.++.+. ..+.+.+.. .+++.+.++..+ ..++
T Consensus 211 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~-l~i~G~g~-------~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~ 282 (394)
T 2jjm_A 211 EKILIHISNFRKVKRVQDVVQAFAKIVTEVDAK-LLLVGDGP-------EFCTILQLVKNLHIEDRVLFLGKQDNVAELL 282 (394)
T ss_dssp -CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCE-EEEECCCT-------THHHHHHHHHTTTCGGGBCCCBSCSCTHHHH
T ss_pred CeEEEEeeccccccCHHHHHHHHHHHHhhCCCE-EEEECCch-------HHHHHHHHHHHcCCCCeEEEeCchhhHHHHH
Confidence 356667788753 2334444444444332 343 34444321 112232221 357777776544 5689
Q ss_pred cCCCcceee----eccChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCc
Q 012217 342 KHPSIGGFL----THCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGE 417 (468)
Q Consensus 342 ~~~~~~~~v----~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~ 417 (468)
..+++ +| .-|.-+++.||+++|+|+|+.+.. .....+ +..+.|+.+. .-+.++++++|.++++|+
T Consensus 283 ~~adv--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e~v-~~~~~g~~~~----~~d~~~la~~i~~l~~~~ 351 (394)
T 2jjm_A 283 AMSDL--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPEVI-QHGDTGYLCE----VGDTTGVADQAIQLLKDE 351 (394)
T ss_dssp HTCSE--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTTTC-CBTTTEEEEC----TTCHHHHHHHHHHHHHCH
T ss_pred HhCCE--EEeccccCCCchHHHHHHhcCCCEEEecCC----ChHHHh-hcCCceEEeC----CCCHHHHHHHHHHHHcCH
Confidence 89998 77 445567899999999999998653 233333 4435677775 347899999999999887
Q ss_pred h-HHHHHHHHHHHH
Q 012217 418 K-GKQMRNKAMEWK 430 (468)
Q Consensus 418 ~-~~~~~~~a~~l~ 430 (468)
+ .+.+.+++++..
T Consensus 352 ~~~~~~~~~~~~~~ 365 (394)
T 2jjm_A 352 ELHRNMGERARESV 365 (394)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 3 234555555544
No 32
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=98.15 E-value=1.2e-05 Score=78.93 Aligned_cols=128 Identities=13% Similarity=0.138 Sum_probs=80.9
Q ss_pred CceEEEeecCCcCCCHHHHHHHHHHHHc-----CCCCEEEEEcCCCCCCCCCCCchhHHHHh--hcCceEecccCh---H
Q 012217 269 KSVIYVNFGSFIFMNKQQLIEVAMGLVN-----SNHPFLWIIRPDLVTGETADLPAEFEVKA--KEKGFVASWCPQ---E 338 (468)
Q Consensus 269 ~~vv~vs~GS~~~~~~~~~~~~~~~l~~-----~~~~~lw~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~p~---~ 338 (468)
+++|+++.|...... .+..++++++. .+..+++..+.+ ..+.+.+.+.. .+++.+.+++++ .
T Consensus 198 ~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~------~~~~~~l~~~~~~~~~v~~~g~~g~~~~~ 269 (376)
T 1v4v_A 198 GPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLN------PVVREAVFPVLKGVRNFVLLDPLEYGSMA 269 (376)
T ss_dssp SCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSC------HHHHHHHHHHHTTCTTEEEECCCCHHHHH
T ss_pred CCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCC------HHHHHHHHHHhccCCCEEEECCCCHHHHH
Confidence 457778877653322 23444454432 234454443432 00112222221 247888866555 4
Q ss_pred HhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCc
Q 012217 339 EVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGE 417 (468)
Q Consensus 339 ~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~ 417 (468)
.++..+++ ||+.+| |.+.||+++|+|+|+.+..+++... + + .|.|+.+. .+.++++++|.++++|+
T Consensus 270 ~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~---~-~-~g~g~lv~-----~d~~~la~~i~~ll~d~ 335 (376)
T 1v4v_A 270 ALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG---L-K-AGILKLAG-----TDPEGVYRVVKGLLENP 335 (376)
T ss_dssp HHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH---H-H-HTSEEECC-----SCHHHHHHHHHHHHTCH
T ss_pred HHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh---h-c-CCceEECC-----CCHHHHHHHHHHHHhCh
Confidence 78989998 999884 4466999999999999876666552 3 3 36776663 38999999999999887
No 33
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=98.03 E-value=8.2e-06 Score=80.29 Aligned_cols=130 Identities=12% Similarity=0.126 Sum_probs=82.6
Q ss_pred CCceEEEeecCCcCCCHHHHHHHHHHHHc----C-CCCEEEEEcCCCCCCCCCCCchhHHHHhh--cCceEecccCh---
Q 012217 268 PKSVIYVNFGSFIFMNKQQLIEVAMGLVN----S-NHPFLWIIRPDLVTGETADLPAEFEVKAK--EKGFVASWCPQ--- 337 (468)
Q Consensus 268 ~~~vv~vs~GS~~~~~~~~~~~~~~~l~~----~-~~~~lw~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~p~--- 337 (468)
++++++++.|....... .+..+++++.. . +..+++..+.+ ..+.+.+.+... +++.+.+++++
T Consensus 204 ~~~~vl~~~gr~~~~~k-g~~~li~a~~~l~~~~~~~~l~i~~g~~------~~~~~~l~~~~~~~~~v~~~g~~~~~~~ 276 (384)
T 1vgv_A 204 DKKMILVTGHRRESFGR-GFEEICHALADIATTHQDIQIVYPVHLN------PNVREPVNRILGHVKNVILIDPQEYLPF 276 (384)
T ss_dssp TSEEEEEECCCBSSCCH-HHHHHHHHHHHHHHHCTTEEEEEECCBC------HHHHHHHHHHHTTCTTEEEECCCCHHHH
T ss_pred CCCEEEEEeCCccccch-HHHHHHHHHHHHHhhCCCeEEEEEcCCC------HHHHHHHHHHhhcCCCEEEeCCCCHHHH
Confidence 34578888887654322 33444444432 2 34455433321 001112222222 57888766664
Q ss_pred HHhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCc
Q 012217 338 EEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGE 417 (468)
Q Consensus 338 ~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~ 417 (468)
..++..+++ ||+.+|. .+.||+++|+|+|+.+..++. ..+++. |.|+.+. . +.++++++|.++++|+
T Consensus 277 ~~~~~~ad~--~v~~Sg~-~~lEA~a~G~PvI~~~~~~~~----~e~v~~-g~g~lv~---~--d~~~la~~i~~ll~d~ 343 (384)
T 1vgv_A 277 VWLMNHAWL--ILTDSGG-IQEEAPSLGKPVLVMRDTTER----PEAVTA-GTVRLVG---T--DKQRIVEEVTRLLKDE 343 (384)
T ss_dssp HHHHHHCSE--EEESSST-GGGTGGGGTCCEEEESSCCSC----HHHHHH-TSEEEEC---S--SHHHHHHHHHHHHHCH
T ss_pred HHHHHhCcE--EEECCcc-hHHHHHHcCCCEEEccCCCCc----chhhhC-CceEEeC---C--CHHHHHHHHHHHHhCh
Confidence 467889998 9998864 488999999999999874443 233244 7888775 2 8999999999999887
No 34
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=97.86 E-value=1.9e-05 Score=78.57 Aligned_cols=108 Identities=14% Similarity=0.143 Sum_probs=72.7
Q ss_pred cCceEecccCh---HHhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcch
Q 012217 327 EKGFVASWCPQ---EEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIR 403 (468)
Q Consensus 327 ~~~~v~~~~p~---~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~ 403 (468)
+++.+++++++ ..++.++++ +|+-.|.. +.||.++|+|+|+.|-..+++. .+ + .|.|+.+. .+.
T Consensus 282 ~~v~l~~~l~~~~~~~l~~~ad~--vv~~SGg~-~~EA~a~g~PvV~~~~~~~~~e---~v-~-~g~~~lv~-----~d~ 348 (403)
T 3ot5_A 282 ERIHLIEPLDAIDFHNFLRKSYL--VFTDSGGV-QEEAPGMGVPVLVLRDTTERPE---GI-E-AGTLKLIG-----TNK 348 (403)
T ss_dssp TTEEEECCCCHHHHHHHHHHEEE--EEECCHHH-HHHGGGTTCCEEECCSSCSCHH---HH-H-HTSEEECC-----SCH
T ss_pred CCEEEeCCCCHHHHHHHHHhcCE--EEECCccH-HHHHHHhCCCEEEecCCCcchh---he-e-CCcEEEcC-----CCH
Confidence 57888888864 457888887 99887533 3699999999999976666554 23 4 37776664 289
Q ss_pred hHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHH
Q 012217 404 NEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEI 454 (468)
Q Consensus 404 ~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~~~~ 454 (468)
++|.++|.++++|+ ..+++..+- .+.++.++.+.+.++.+.+.+
T Consensus 349 ~~l~~ai~~ll~~~---~~~~~m~~~----~~~~g~~~aa~rI~~~l~~~l 392 (403)
T 3ot5_A 349 ENLIKEALDLLDNK---ESHDKMAQA----ANPYGDGFAANRILAAIKSHF 392 (403)
T ss_dssp HHHHHHHHHHHHCH---HHHHHHHHS----CCTTCCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCH---HHHHHHHhh----cCcccCCcHHHHHHHHHHHHh
Confidence 99999999999887 443332221 122445666555554444443
No 35
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=97.86 E-value=3.2e-05 Score=76.79 Aligned_cols=78 Identities=14% Similarity=0.156 Sum_probs=58.6
Q ss_pred cCceEecccCh---HHhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcch
Q 012217 327 EKGFVASWCPQ---EEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIR 403 (468)
Q Consensus 327 ~~~~v~~~~p~---~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~ 403 (468)
+++.+.+++++ ..++..+++ ||+-+| |.+.||.++|+|+|+..-..+++ ..+ +. |.++.+. .+.
T Consensus 288 ~~v~~~~~lg~~~~~~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~---e~v-~~-G~~~lv~-----~d~ 354 (396)
T 3dzc_A 288 SNIVLIEPQQYLPFVYLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERP---EAV-AA-GTVKLVG-----TNQ 354 (396)
T ss_dssp TTEEEECCCCHHHHHHHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCH---HHH-HH-TSEEECT-----TCH
T ss_pred CCEEEeCCCCHHHHHHHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcch---HHH-Hc-CceEEcC-----CCH
Confidence 57888777653 468888988 999988 66679999999999975444442 223 43 7775543 269
Q ss_pred hHHHHHHHHHhcCc
Q 012217 404 NEVEKLVREMMEGE 417 (468)
Q Consensus 404 ~~l~~av~~~l~~~ 417 (468)
++|.++|.++++|+
T Consensus 355 ~~l~~ai~~ll~d~ 368 (396)
T 3dzc_A 355 QQICDALSLLLTDP 368 (396)
T ss_dssp HHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHcCH
Confidence 99999999999887
No 36
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.67 E-value=0.00043 Score=59.06 Aligned_cols=141 Identities=11% Similarity=0.090 Sum_probs=82.5
Q ss_pred ceEEEeecCCcCCCHHHHHHHHHHHHcCC--CCE-EEEEcCCCCCCCCCCCchhHH---HHhhcCceEecccChH---Hh
Q 012217 270 SVIYVNFGSFIFMNKQQLIEVAMGLVNSN--HPF-LWIIRPDLVTGETADLPAEFE---VKAKEKGFVASWCPQE---EV 340 (468)
Q Consensus 270 ~vv~vs~GS~~~~~~~~~~~~~~~l~~~~--~~~-lw~~~~~~~~~~~~~~~~~~~---~~~~~~~~v~~~~p~~---~i 340 (468)
+++++..|++... +.+..+++++.... ..+ ++.++.+. ..+.+. ++.+-++.+ +|+|+. .+
T Consensus 2 ~~~i~~~G~~~~~--Kg~~~li~a~~~l~~~~~~~l~i~G~g~-------~~~~~~~~~~~~~~~v~~-g~~~~~~~~~~ 71 (166)
T 3qhp_A 2 PFKIAMVGRYSNE--KNQSVLIKAVALSKYKQDIVLLLKGKGP-------DEKKIKLLAQKLGVKAEF-GFVNSNELLEI 71 (166)
T ss_dssp CEEEEEESCCSTT--TTHHHHHHHHHTCTTGGGEEEEEECCST-------THHHHHHHHHHHTCEEEC-CCCCHHHHHHH
T ss_pred ceEEEEEeccchh--cCHHHHHHHHHHhccCCCeEEEEEeCCc-------cHHHHHHHHHHcCCeEEE-eecCHHHHHHH
Confidence 4778888887532 33455666665542 233 33334221 112222 223336777 999874 47
Q ss_pred hcCCCcceeeec----cChhhHHHHHhcCC-cEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhc
Q 012217 341 LKHPSIGGFLTH----CGWNSIVESLCSGV-PMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMME 415 (468)
Q Consensus 341 l~~~~~~~~v~h----gG~~s~~eal~~Gv-P~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~ 415 (468)
+..+++ +|.- +.-.++.||+++|+ |+|+... .......+ +.-+. .+. .-+.++++++|.++++
T Consensus 72 ~~~adv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~---~~~~~~~~-~~~~~--~~~----~~~~~~l~~~i~~l~~ 139 (166)
T 3qhp_A 72 LKTCTL--YVHAANVESEAIACLEAISVGIVPVIANSP---LSATRQFA-LDERS--LFE----PNNAKDLSAKIDWWLE 139 (166)
T ss_dssp HTTCSE--EEECCCSCCCCHHHHHHHHTTCCEEEECCT---TCGGGGGC-SSGGG--EEC----TTCHHHHHHHHHHHHH
T ss_pred HHhCCE--EEECCcccCccHHHHHHHhcCCCcEEeeCC---CCchhhhc-cCCce--EEc----CCCHHHHHHHHHHHHh
Confidence 888888 6652 33468999999996 9999332 22222222 33233 232 3479999999999998
Q ss_pred Cch-HHHHHHHHHHHHHH
Q 012217 416 GEK-GKQMRNKAMEWKGL 432 (468)
Q Consensus 416 ~~~-~~~~~~~a~~l~~~ 432 (468)
|++ .+++.+++++..+.
T Consensus 140 ~~~~~~~~~~~~~~~~~~ 157 (166)
T 3qhp_A 140 NKLERERMQNEYAKSALN 157 (166)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 873 24566666665533
No 37
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=97.66 E-value=0.00014 Score=71.12 Aligned_cols=132 Identities=9% Similarity=0.058 Sum_probs=79.9
Q ss_pred CCceEEEeecCCcCCCHHHHHHHHHHHHcC---CCCEEEEEcCCCCCCCCCCCchhHHHHhh--cCceEecccCh---HH
Q 012217 268 PKSVIYVNFGSFIFMNKQQLIEVAMGLVNS---NHPFLWIIRPDLVTGETADLPAEFEVKAK--EKGFVASWCPQ---EE 339 (468)
Q Consensus 268 ~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~---~~~~lw~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~p~---~~ 339 (468)
++++++++.|...... +.+..+++++... ...+.++++.+. ...+.+.+.+... +++.+.+++++ ..
T Consensus 204 ~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~~~g~----~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 278 (375)
T 3beo_A 204 NNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVYPVHM----NPVVRETANDILGDYGRIHLIEPLDVIDFHN 278 (375)
T ss_dssp TSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEEECCS----CHHHHHHHHHHHTTCTTEEEECCCCHHHHHH
T ss_pred CCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEEeCCC----CHHHHHHHHHHhhccCCEEEeCCCCHHHHHH
Confidence 3457777778754322 2345555555421 112333333220 0001112222223 58888777765 36
Q ss_pred hhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcCc
Q 012217 340 VLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEGE 417 (468)
Q Consensus 340 il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~~ 417 (468)
++..+++ ||+.+| +.+.||+++|+|+|+....+.. ...+ +. |.|+.+. . +.++++++|.++++|+
T Consensus 279 ~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~---~e~v-~~-g~g~~v~----~-d~~~la~~i~~ll~~~ 343 (375)
T 3beo_A 279 VAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTER---PEGI-EA-GTLKLAG----T-DEETIFSLADELLSDK 343 (375)
T ss_dssp HHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSC---HHHH-HT-TSEEECC----S-CHHHHHHHHHHHHHCH
T ss_pred HHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCC---ceee-cC-CceEEcC----C-CHHHHHHHHHHHHhCh
Confidence 8888998 888874 5588999999999998543332 2223 44 6787664 2 8899999999999887
No 38
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=97.63 E-value=0.00084 Score=65.23 Aligned_cols=144 Identities=15% Similarity=0.258 Sum_probs=92.3
Q ss_pred CceEEEeecCCcCCCHHHHHHHHHHHHcCCC----C-EEEEEcCCCCCCCCCCCchhHHH---H--hhcCceEecccCh-
Q 012217 269 KSVIYVNFGSFIFMNKQQLIEVAMGLVNSNH----P-FLWIIRPDLVTGETADLPAEFEV---K--AKEKGFVASWCPQ- 337 (468)
Q Consensus 269 ~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~----~-~lw~~~~~~~~~~~~~~~~~~~~---~--~~~~~~v~~~~p~- 337 (468)
+..+++..|+.... +.+..+++++..... . -++.++.+ . .+.+.+ + +.+++.+.++..+
T Consensus 195 ~~~~i~~~G~~~~~--K~~~~li~a~~~l~~~~~~~~~l~i~G~g----~----~~~~~~~~~~~~~~~~v~~~g~~~~~ 264 (374)
T 2iw1_A 195 QQNLLLQVGSDFGR--KGVDRSIEALASLPESLRHNTLLFVVGQD----K----PRKFEALAEKLGVRSNVHFFSGRNDV 264 (374)
T ss_dssp TCEEEEEECSCTTT--TTHHHHHHHHHTSCHHHHHTEEEEEESSS----C----CHHHHHHHHHHTCGGGEEEESCCSCH
T ss_pred CCeEEEEeccchhh--cCHHHHHHHHHHhHhccCCceEEEEEcCC----C----HHHHHHHHHHcCCCCcEEECCCcccH
Confidence 34677777876532 334556666665422 2 24445532 1 122322 2 2368888887554
Q ss_pred HHhhcCCCcceeee----ccChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHH
Q 012217 338 EEVLKHPSIGGFLT----HCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREM 413 (468)
Q Consensus 338 ~~il~~~~~~~~v~----hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~ 413 (468)
..++..+++ +|. -|.-+++.||+++|+|+|+... ..+...+ +..+.|+.+. ..-+.++++++|.++
T Consensus 265 ~~~~~~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~----~~~~e~i-~~~~~g~~~~---~~~~~~~l~~~i~~l 334 (374)
T 2iw1_A 265 SELMAAADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAV----CGYAHYI-ADANCGTVIA---EPFSQEQLNEVLRKA 334 (374)
T ss_dssp HHHHHHCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETT----STTTHHH-HHHTCEEEEC---SSCCHHHHHHHHHHH
T ss_pred HHHHHhcCE--EEeccccCCcccHHHHHHHCCCCEEEecC----CCchhhh-ccCCceEEeC---CCCCHHHHHHHHHHH
Confidence 568888888 665 3556789999999999999865 3345555 5547788775 245899999999999
Q ss_pred hcCch-HHHHHHHHHHHHHH
Q 012217 414 MEGEK-GKQMRNKAMEWKGL 432 (468)
Q Consensus 414 l~~~~-~~~~~~~a~~l~~~ 432 (468)
++|++ .+.+.+++++..+.
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~ 354 (374)
T 2iw1_A 335 LTQSPLRMAWAENARHYADT 354 (374)
T ss_dssp HHCHHHHHHHHHHHHHHHHH
T ss_pred HcChHHHHHHHHHHHHHHHH
Confidence 98763 24556666655553
No 39
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.50 E-value=0.002 Score=56.68 Aligned_cols=143 Identities=13% Similarity=0.102 Sum_probs=84.1
Q ss_pred eEEEeecCCc-CC-CHHHHHHHHHHHH--cCCCCE-EEEEcCCCCCCCCCCCchhHHHHhh--cCceE-ecccChH---H
Q 012217 271 VIYVNFGSFI-FM-NKQQLIEVAMGLV--NSNHPF-LWIIRPDLVTGETADLPAEFEVKAK--EKGFV-ASWCPQE---E 339 (468)
Q Consensus 271 vv~vs~GS~~-~~-~~~~~~~~~~~l~--~~~~~~-lw~~~~~~~~~~~~~~~~~~~~~~~--~~~~v-~~~~p~~---~ 339 (468)
.+++..|+.. .. ..+.+.+.+..+. +....+ ++.++... ....+.+.+... +++.+ .+|+++. .
T Consensus 37 ~~i~~~G~~~~~~K~~~~li~a~~~l~~~~~~~~~~l~i~G~~~-----~~~~~~l~~~~~~~~~v~~~~g~~~~~~~~~ 111 (200)
T 2bfw_A 37 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGD-----PELEGWARSLEEKHGNVKVITEMLSREFVRE 111 (200)
T ss_dssp EEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBC-----HHHHHHHHHHHHHCTTEEEECSCCCHHHHHH
T ss_pred CEEEEeeccccccCCHHHHHHHHHHHHhhccCCCeEEEEECCCC-----hHHHHHHHHHHHhcCCEEEEeccCCHHHHHH
Confidence 4666778876 33 3455555555553 222222 23333220 001122222221 28888 8999853 5
Q ss_pred hhcCCCcceeeecc---C-hhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhc
Q 012217 340 VLKHPSIGGFLTHC---G-WNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMME 415 (468)
Q Consensus 340 il~~~~~~~~v~hg---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~ 415 (468)
++..+++ +|.-. | -+++.||+++|+|+|+.... .+...+ ..+.|+.+. .-+.++++++|.++++
T Consensus 112 ~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~~--~~~~g~~~~----~~~~~~l~~~i~~l~~ 179 (200)
T 2bfw_A 112 LYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAVG----GLRDII--TNETGILVK----AGDPGELANAILKALE 179 (200)
T ss_dssp HHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESCH----HHHHHC--CTTTCEEEC----TTCHHHHHHHHHHHHH
T ss_pred HHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCCC----ChHHHc--CCCceEEec----CCCHHHHHHHHHHHHh
Confidence 7888888 66433 3 36889999999999998542 333333 235676665 3478999999999998
Q ss_pred -Cch-HHHHHHHHHHHH
Q 012217 416 -GEK-GKQMRNKAMEWK 430 (468)
Q Consensus 416 -~~~-~~~~~~~a~~l~ 430 (468)
|++ .+.+.+++++..
T Consensus 180 ~~~~~~~~~~~~a~~~~ 196 (200)
T 2bfw_A 180 LSRSDLSKFRENCKKRA 196 (200)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHH
Confidence 873 244555555544
No 40
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=97.48 E-value=8.7e-05 Score=73.28 Aligned_cols=128 Identities=14% Similarity=0.090 Sum_probs=82.0
Q ss_pred CceEEEeecCCcCCC-HHHHHHHHHHHHcC----CCCEEEEEcCCCCCCCCCCCchhHHHH---h--hcCceEecccCh-
Q 012217 269 KSVIYVNFGSFIFMN-KQQLIEVAMGLVNS----NHPFLWIIRPDLVTGETADLPAEFEVK---A--KEKGFVASWCPQ- 337 (468)
Q Consensus 269 ~~vv~vs~GS~~~~~-~~~~~~~~~~l~~~----~~~~lw~~~~~~~~~~~~~~~~~~~~~---~--~~~~~v~~~~p~- 337 (468)
+++|+++.|...... .+.+..+++++.+. +..+|+...+. ..+.+.+. . .+|+.+++.+++
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~--------~~~~l~~~~~~~~~~~~v~l~~~lg~~ 274 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPR--------TKKRLEDLEGFKELGDKIRFLPAFSFT 274 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHH--------HHHHHHTSGGGGGTGGGEEECCCCCHH
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChH--------HHHHHHHHHHHhcCCCCEEEEcCCCHH
Confidence 458889888764433 24556666666432 56677765421 11111111 1 257777665554
Q ss_pred --HHhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhc
Q 012217 338 --EEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMME 415 (468)
Q Consensus 338 --~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~ 415 (468)
..++.++++ +|+-.|. .+.||.++|+|+|+++...+-+. .+ +. |.++.+. .+.++|.+++.++++
T Consensus 275 ~~~~l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e---~v-~~-G~~~lv~-----~d~~~i~~ai~~ll~ 341 (385)
T 4hwg_A 275 DYVKLQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE---GM-DA-GTLIMSG-----FKAERVLQAVKTITE 341 (385)
T ss_dssp HHHHHHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH---HH-HH-TCCEECC-----SSHHHHHHHHHHHHT
T ss_pred HHHHHHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh---hh-hc-CceEEcC-----CCHHHHHHHHHHHHh
Confidence 468889998 9999886 46899999999999976543221 23 33 7666553 379999999999998
Q ss_pred Cc
Q 012217 416 GE 417 (468)
Q Consensus 416 ~~ 417 (468)
|+
T Consensus 342 d~ 343 (385)
T 4hwg_A 342 EH 343 (385)
T ss_dssp TC
T ss_pred Ch
Confidence 76
No 41
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.41 E-value=0.0023 Score=66.23 Aligned_cols=95 Identities=9% Similarity=0.083 Sum_probs=60.9
Q ss_pred cCceEecccChH---HhhcCCCcceeee---ccChhhHHHHHhcCCcEEecCCCCCcccch-hhheeeceeEEEEeCCCC
Q 012217 327 EKGFVASWCPQE---EVLKHPSIGGFLT---HCGWNSIVESLCSGVPMICWPFTGDQPTNG-RYVCNEWGVGMEINGDDE 399 (468)
Q Consensus 327 ~~~~v~~~~p~~---~il~~~~~~~~v~---hgG~~s~~eal~~GvP~v~~P~~~DQ~~na-~~~~~~~g~g~~~~~~~~ 399 (468)
+++.+.+++|+. .++..+++ ||. .|+-+++.||+++|+|+|++|-..=..... ..+ ...|+.-.+. +
T Consensus 434 ~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l-~~~g~~e~v~---~ 507 (568)
T 2vsy_A 434 QRLVFMPKLPHPQYLARYRHADL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLN-HHLGLDEMNV---A 507 (568)
T ss_dssp GGEEEECCCCHHHHHHHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHH-HHHTCGGGBC---S
T ss_pred hHEEeeCCCCHHHHHHHHhcCCE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHH-HHCCChhhhc---C
Confidence 678889999854 56888888 662 255578899999999999986431111111 122 2224432232 2
Q ss_pred CcchhHHHHHHHHHhcCch-HHHHHHHHHHH
Q 012217 400 DVIRNEVEKLVREMMEGEK-GKQMRNKAMEW 429 (468)
Q Consensus 400 ~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l 429 (468)
+.+++.+++.++++|++ .+.+++++++.
T Consensus 508 --~~~~la~~i~~l~~~~~~~~~~~~~~~~~ 536 (568)
T 2vsy_A 508 --DDAAFVAKAVALASDPAALTALHARVDVL 536 (568)
T ss_dssp --SHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 78999999999998873 23444444443
No 42
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.41 E-value=0.00052 Score=70.79 Aligned_cols=135 Identities=12% Similarity=0.082 Sum_probs=86.8
Q ss_pred ceEEEeecCCcCCCHHHHHHHHHHHHcCCCCEEEEE--cCCCCCCCCCCCchhH-HHHhhcCceEecccChHH---hhcC
Q 012217 270 SVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWII--RPDLVTGETADLPAEF-EVKAKEKGFVASWCPQEE---VLKH 343 (468)
Q Consensus 270 ~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~--~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~p~~~---il~~ 343 (468)
.++|.+|++.....++.++...+-+++.+..++|.. +.. .+....+-..+ ...+.+++.+.+..|+.+ .+..
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~--~g~~~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~ 518 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQS--NGITHPYVERFIKSYLGDSATAHPHSPYHQYLRILHN 518 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSC--CGGGHHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHT
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCC--chhhHHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhc
Confidence 589999999888888888888888888887888754 321 01000010111 112446777888888765 4578
Q ss_pred CCcceeee---ccChhhHHHHHhcCCcEEecCCCCCcccchhhh----eeeceeEEE-EeCCCCCcchhHHHHHHHHHhc
Q 012217 344 PSIGGFLT---HCGWNSIVESLCSGVPMICWPFTGDQPTNGRYV----CNEWGVGME-INGDDEDVIRNEVEKLVREMME 415 (468)
Q Consensus 344 ~~~~~~v~---hgG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~----~~~~g~g~~-~~~~~~~~~~~~l~~av~~~l~ 415 (468)
+++ |+. .+|.+|+.||+++|||+|+++-- + .+.|+ ....|+.-. +. -+.++..+...++..
T Consensus 519 aDI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~--~--~asRvgaSlL~~~GLpE~LIA-----~d~eeYv~~Av~La~ 587 (631)
T 3q3e_A 519 CDM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGA--E--VHEHIDEGLFKRLGLPEWLIA-----NTVDEYVERAVRLAE 587 (631)
T ss_dssp CSE--EECCSSSCCSHHHHHHHHTTCCEEEECCS--S--HHHHHHHHHHHHTTCCGGGEE-----SSHHHHHHHHHHHHH
T ss_pred CcE--EEeCCcccCChHHHHHHHcCCCEEeccCC--c--HHHHhHHHHHHhcCCCcceec-----CCHHHHHHHHHHHhC
Confidence 887 553 36779999999999999998642 2 22222 123344321 33 257777777777777
Q ss_pred Cc
Q 012217 416 GE 417 (468)
Q Consensus 416 ~~ 417 (468)
|+
T Consensus 588 D~ 589 (631)
T 3q3e_A 588 NH 589 (631)
T ss_dssp CH
T ss_pred CH
Confidence 77
No 43
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=97.32 E-value=0.0012 Score=63.54 Aligned_cols=125 Identities=14% Similarity=0.073 Sum_probs=78.9
Q ss_pred EEEeecCCcCCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChH---HhhcCCCcce
Q 012217 272 IYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQE---EVLKHPSIGG 348 (468)
Q Consensus 272 v~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~---~il~~~~~~~ 348 (468)
+++..|+... .+.+..++++++..+.++++ ++.+. ..+.+ ..+.++.++++.+.+|+++. .++..+++
T Consensus 164 ~i~~vG~~~~--~Kg~~~li~a~~~~~~~l~i-~G~g~---~~~~l-~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv-- 234 (342)
T 2iuy_A 164 FLLFMGRVSP--HKGALEAAAFAHACGRRLVL-AGPAW---EPEYF-DEITRRYGSTVEPIGEVGGERRLDLLASAHA-- 234 (342)
T ss_dssp CEEEESCCCG--GGTHHHHHHHHHHHTCCEEE-ESCCC---CHHHH-HHHHHHHTTTEEECCCCCHHHHHHHHHHCSE--
T ss_pred EEEEEecccc--ccCHHHHHHHHHhcCcEEEE-EeCcc---cHHHH-HHHHHHhCCCEEEeccCCHHHHHHHHHhCCE--
Confidence 4555677652 23355566666665666554 44321 00001 12223345789999999976 68888888
Q ss_pred eee--c-----------cC-hhhHHHHHhcCCcEEecCCCCCcccchhhheee--ceeEEEEeCCCCCcchhHHHHHHHH
Q 012217 349 FLT--H-----------CG-WNSIVESLCSGVPMICWPFTGDQPTNGRYVCNE--WGVGMEINGDDEDVIRNEVEKLVRE 412 (468)
Q Consensus 349 ~v~--h-----------gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~--~g~g~~~~~~~~~~~~~~l~~av~~ 412 (468)
+|. . -| -+++.||+++|+|+|+.... .+...+ +. -+.|+.+. . +.++++++|.+
T Consensus 235 ~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~----~~~e~~-~~~~~~~g~~~~----~-d~~~l~~~i~~ 304 (342)
T 2iuy_A 235 VLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG----CLAEIV-PSVGEVVGYGTD----F-APDEARRTLAG 304 (342)
T ss_dssp EEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT----THHHHG-GGGEEECCSSSC----C-CHHHHHHHHHT
T ss_pred EEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCC----ChHHHh-cccCCCceEEcC----C-CHHHHHHHHHH
Confidence 653 2 23 36899999999999998753 344444 33 24555443 4 89999999999
Q ss_pred Hhc
Q 012217 413 MME 415 (468)
Q Consensus 413 ~l~ 415 (468)
+++
T Consensus 305 l~~ 307 (342)
T 2iuy_A 305 LPA 307 (342)
T ss_dssp SCC
T ss_pred HHH
Confidence 986
No 44
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.22 E-value=0.0042 Score=66.31 Aligned_cols=97 Identities=22% Similarity=0.350 Sum_probs=73.7
Q ss_pred CCceEEEeecCCcCCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHh------hcCceEecccChHH--
Q 012217 268 PKSVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKA------KEKGFVASWCPQEE-- 339 (468)
Q Consensus 268 ~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~~p~~~-- 339 (468)
.+.+||.||-+....+++.+...++-|++.+...||..+.... ....+.+.. ++++.+.+..|+.+
T Consensus 521 ~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~------~~~~l~~~~~~~gi~~~r~~f~~~~~~~~~l 594 (723)
T 4gyw_A 521 EDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAV------GEPNIQQYAQNMGLPQNRIIFSPVAPKEEHV 594 (723)
T ss_dssp TTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGG------GHHHHHHHHHHTTCCGGGEEEEECCCHHHHH
T ss_pred CCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHH------HHHHHHHHHHhcCCCcCeEEECCCCCHHHHH
Confidence 4569999999998999999999999999999999999875421 111122111 35677777777654
Q ss_pred -hhcCCCcceeee---ccChhhHHHHHhcCCcEEecC
Q 012217 340 -VLKHPSIGGFLT---HCGWNSIVESLCSGVPMICWP 372 (468)
Q Consensus 340 -il~~~~~~~~v~---hgG~~s~~eal~~GvP~v~~P 372 (468)
.+...++ |+- .+|.+|+.|||++|||+|+++
T Consensus 595 ~~~~~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~ 629 (723)
T 4gyw_A 595 RRGQLADV--CLDTPLCNGHTTGMDVLWAGTPMVTMP 629 (723)
T ss_dssp HHGGGCSE--EECCSSSCCSHHHHHHHHTTCCEEBCC
T ss_pred HHhCCCeE--EeCCCCcCCHHHHHHHHHcCCCEEEcc
Confidence 4556666 765 788899999999999999998
No 45
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=97.05 E-value=0.0069 Score=59.82 Aligned_cols=91 Identities=16% Similarity=0.104 Sum_probs=63.4
Q ss_pred cCceEecccC---h---HHhhcCCCcceeeecc----ChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeC
Q 012217 327 EKGFVASWCP---Q---EEVLKHPSIGGFLTHC----GWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEING 396 (468)
Q Consensus 327 ~~~~v~~~~p---~---~~il~~~~~~~~v~hg----G~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~ 396 (468)
+++.+.+|++ + ..++..+++ ||.-. .-+++.||+++|+|+|+.+. ..+...+ +.-+.|+.+.
T Consensus 293 ~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i-~~~~~g~l~~- 364 (416)
T 2x6q_A 293 YDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQI-VDGETGFLVR- 364 (416)
T ss_dssp TTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHC-CBTTTEEEES-
T ss_pred CcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhhe-ecCCCeEEEC-
Confidence 6888888765 3 357788888 66544 34689999999999999764 3344444 4445676653
Q ss_pred CCCCcchhHHHHHHHHHhcCch-HHHHHHHHHHHH
Q 012217 397 DDEDVIRNEVEKLVREMMEGEK-GKQMRNKAMEWK 430 (468)
Q Consensus 397 ~~~~~~~~~l~~av~~~l~~~~-~~~~~~~a~~l~ 430 (468)
+.++++++|.++++|++ .+.+.+++++..
T Consensus 365 -----d~~~la~~i~~ll~~~~~~~~~~~~a~~~~ 394 (416)
T 2x6q_A 365 -----DANEAVEVVLYLLKHPEVSKEMGAKAKERV 394 (416)
T ss_dssp -----SHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred -----CHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 78999999999998873 234455554443
No 46
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.99 E-value=0.0015 Score=63.14 Aligned_cols=111 Identities=13% Similarity=0.130 Sum_probs=78.7
Q ss_pred CceEecccChHHh---hcCCCcceeeeccCh---------hhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEe
Q 012217 328 KGFVASWCPQEEV---LKHPSIGGFLTHCGW---------NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEIN 395 (468)
Q Consensus 328 ~~~v~~~~p~~~i---l~~~~~~~~v~hgG~---------~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~ 395 (468)
|+...+|+|+.++ |...+++.+..-+.+ +-+.|++++|+|+|+.+ ...++..+ ++.++|+.+.
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v-~~~~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELI-ENNGLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHH-HHHTCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHH-HhCCeEEEeC
Confidence 8999999999775 445556444322222 34789999999999865 45666666 6669998875
Q ss_pred CCCCCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHH
Q 012217 396 GDDEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEI 454 (468)
Q Consensus 396 ~~~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~~~~ 454 (468)
+.+++.+++..+. +++.++|++|+++.++++++ |--....+.+.+.++
T Consensus 290 ------~~~e~~~~i~~l~-~~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~~ 337 (339)
T 3rhz_A 290 ------DVEEAIMKVKNVN-EDEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQA 337 (339)
T ss_dssp ------SHHHHHHHHHHCC-HHHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHHH
T ss_pred ------CHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHHh
Confidence 3688888888764 44567899999999998885 445555555555443
No 47
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=96.94 E-value=0.0029 Score=61.99 Aligned_cols=98 Identities=20% Similarity=0.326 Sum_probs=67.3
Q ss_pred CceEecccCh-HHhhcCCCcceeee---c--cChhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCc
Q 012217 328 KGFVASWCPQ-EEVLKHPSIGGFLT---H--CGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDV 401 (468)
Q Consensus 328 ~~~v~~~~p~-~~il~~~~~~~~v~---h--gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~ 401 (468)
++.+.++..+ ..++..+++ |+. . +|..++.||+++|+|+|+-|..++.......+ .+-|.++.+.
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~-~~~G~l~~~~------ 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFL-EKEGAGFEVK------ 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHH-HHTTCEEECC------
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHH-HHCCCEEEeC------
Confidence 3444454443 457877776 543 1 23478999999999999877766666655544 2336666553
Q ss_pred chhHHHHHHHHHhcCchHHHHHHHHHHHHHHHH
Q 012217 402 IRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAE 434 (468)
Q Consensus 402 ~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~ 434 (468)
+.++++++|.++++|+..+.|.+++++..+.-.
T Consensus 332 d~~~La~ai~~ll~d~~r~~mg~~ar~~~~~~~ 364 (374)
T 2xci_A 332 NETELVTKLTELLSVKKEIKVEEKSREIKGCYL 364 (374)
T ss_dssp SHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcc
Confidence 679999999999987323578888888776633
No 48
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=96.63 E-value=0.016 Score=57.09 Aligned_cols=77 Identities=10% Similarity=0.023 Sum_probs=50.6
Q ss_pred ceEecccChH---HhhcCCCcceeeec----cChhhHHHHHhcCCcEEecCCCCCcccchhhheeece------------
Q 012217 329 GFVASWCPQE---EVLKHPSIGGFLTH----CGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWG------------ 389 (468)
Q Consensus 329 ~~v~~~~p~~---~il~~~~~~~~v~h----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g------------ 389 (468)
+.+.+|+|+. .++..+++ ||.- |.-+++.||+++|+|+|+.... .....+ +.-.
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~~----g~~e~v-~~~~~~~i~~~~~~~~ 328 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAVG----GADDYF-SGDCVYKIKPSAWISV 328 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECCH----HHHHHS-CTTTSEEECCCEEEEC
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCCC----ChHHHH-ccCccccccccccccc
Confidence 5556899854 47888888 6532 2235899999999999997652 222222 1100
Q ss_pred ---eEE--EEeCCCCCcchhHHHHHHHHHhcCc
Q 012217 390 ---VGM--EINGDDEDVIRNEVEKLVREMMEGE 417 (468)
Q Consensus 390 ---~g~--~~~~~~~~~~~~~l~~av~~~l~~~ 417 (468)
.|+ .+. .-+.++++++| ++++|+
T Consensus 329 ~~~~G~~gl~~----~~d~~~la~~i-~l~~~~ 356 (413)
T 3oy2_A 329 DDRDGIGGIEG----IIDVDDLVEAF-TFFKDE 356 (413)
T ss_dssp TTTCSSCCEEE----ECCHHHHHHHH-HHTTSH
T ss_pred ccccCcceeeC----CCCHHHHHHHH-HHhcCH
Confidence 133 443 23899999999 999887
No 49
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=96.28 E-value=0.095 Score=52.68 Aligned_cols=129 Identities=7% Similarity=0.032 Sum_probs=78.0
Q ss_pred eEEEeecCCcCC-CHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHH---HHhhcCce-EecccChH---Hhhc
Q 012217 271 VIYVNFGSFIFM-NKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFE---VKAKEKGF-VASWCPQE---EVLK 342 (468)
Q Consensus 271 vv~vs~GS~~~~-~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~---~~~~~~~~-v~~~~p~~---~il~ 342 (468)
.+++..|.+... ..+.+.+.+..+.+.+.+++++ +.+. ..+.+.+. .+.++++. +.++ ++. .++.
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~iv-G~g~-----~~~~~~l~~~~~~~~~~v~~~~g~-~~~~~~~~~~ 364 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVL-GAGD-----VALEGALLAAASRHHGRVGVAIGY-NEPLSHLMQA 364 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEE-ECBC-----HHHHHHHHHHHHHTTTTEEEEESC-CHHHHHHHHH
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEEE-eCCc-----hHHHHHHHHHHHhCCCcEEEecCC-CHHHHHHHHh
Confidence 577788887633 3344444444444445555544 4320 00111222 22346776 5677 443 5788
Q ss_pred CCCcceeeec----cChhhHHHHHhcCCcEEecCCCCCcccchhhheeec---------eeEEEEeCCCCCcchhHHHHH
Q 012217 343 HPSIGGFLTH----CGWNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEW---------GVGMEINGDDEDVIRNEVEKL 409 (468)
Q Consensus 343 ~~~~~~~v~h----gG~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~---------g~g~~~~~~~~~~~~~~l~~a 409 (468)
.+++ ||.- |--++++||+++|+|+|+... ......+ +.- +.|+.+. .-+.++++++
T Consensus 365 ~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~~----~~d~~~la~~ 433 (485)
T 1rzu_A 365 GCDA--IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTV-IDANHAALASKAATGVQFS----PVTLDGLKQA 433 (485)
T ss_dssp HCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEES----SCSHHHHHHH
T ss_pred cCCE--EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhhee-cccccccccccCCcceEeC----CCCHHHHHHH
Confidence 8888 6632 224689999999999999755 2334344 442 4677775 3478999999
Q ss_pred HHHHh---cCc
Q 012217 410 VREMM---EGE 417 (468)
Q Consensus 410 v~~~l---~~~ 417 (468)
|.+++ +|+
T Consensus 434 i~~ll~~~~~~ 444 (485)
T 1rzu_A 434 IRRTVRYYHDP 444 (485)
T ss_dssp HHHHHHHHTCH
T ss_pred HHHHHHHhCCH
Confidence 99999 666
No 50
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=96.27 E-value=0.085 Score=53.06 Aligned_cols=131 Identities=10% Similarity=0.066 Sum_probs=77.2
Q ss_pred ceEEEeecCCcC-CCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHH---HHhhcCce-EecccCh--HHhhc
Q 012217 270 SVIYVNFGSFIF-MNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFE---VKAKEKGF-VASWCPQ--EEVLK 342 (468)
Q Consensus 270 ~vv~vs~GS~~~-~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~---~~~~~~~~-v~~~~p~--~~il~ 342 (468)
..+++..|.+.. -..+.+.+.+..+.+.+.+++++-.+. ..+.+.+. .+.++++. +.++... ..++.
T Consensus 292 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~ivG~g~------~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~ 365 (485)
T 2qzs_A 292 VPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGD------PVLQEGFLAAAAEYPGQVGVQIGYHEAFSHRIMG 365 (485)
T ss_dssp SCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEEEEEC------HHHHHHHHHHHHHSTTTEEEEESCCHHHHHHHHH
T ss_pred CeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEEeCCc------hHHHHHHHHHHHhCCCcEEEeCCCCHHHHHHHHH
Confidence 466677777653 233444444444444455555443221 00111222 22335775 6677333 25788
Q ss_pred CCCcceeeecc---C-hhhHHHHHhcCCcEEecCCCCCcccchhhheeec---------eeEEEEeCCCCCcchhHHHHH
Q 012217 343 HPSIGGFLTHC---G-WNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEW---------GVGMEINGDDEDVIRNEVEKL 409 (468)
Q Consensus 343 ~~~~~~~v~hg---G-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~---------g~g~~~~~~~~~~~~~~l~~a 409 (468)
.+++ ||.-. | -+++.||+++|+|+|+... ..+...+ +.- +.|+.+. .-+.++++++
T Consensus 366 ~adv--~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v-~~~~~~~~~~~~~~G~l~~----~~d~~~la~~ 434 (485)
T 2qzs_A 366 GADV--ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTV-SDCSLENLADGVASGFVFE----DSNAWSLLRA 434 (485)
T ss_dssp HCSE--EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHC-CBCCHHHHHTTCCCBEEEC----SSSHHHHHHH
T ss_pred hCCE--EEECCccCCCcHHHHHHHHCCCCEEECCC----CCcccee-ccCccccccccccceEEEC----CCCHHHHHHH
Confidence 8888 66332 3 4678899999999999854 2334344 442 4677775 3478999999
Q ss_pred HHHHh---cCc
Q 012217 410 VREMM---EGE 417 (468)
Q Consensus 410 v~~~l---~~~ 417 (468)
|.+++ +|+
T Consensus 435 i~~ll~~~~~~ 445 (485)
T 2qzs_A 435 IRRAFVLWSRP 445 (485)
T ss_dssp HHHHHHHHTSH
T ss_pred HHHHHHHcCCH
Confidence 99999 566
No 51
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=94.85 E-value=0.33 Score=52.24 Aligned_cols=93 Identities=11% Similarity=0.129 Sum_probs=59.9
Q ss_pred cCceEecc----cChHHhhc----CCCcceeeec---cC-hhhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEE
Q 012217 327 EKGFVASW----CPQEEVLK----HPSIGGFLTH---CG-WNSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEI 394 (468)
Q Consensus 327 ~~~~v~~~----~p~~~il~----~~~~~~~v~h---gG-~~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~ 394 (468)
+++.+.++ +++.++.. .+++ ||.- -| -.++.||+++|+|+|+. |.......+ +.-..|+.+
T Consensus 640 ~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIas----d~GG~~EiV-~dg~~Gllv 712 (816)
T 3s28_A 640 GQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFAT----CKGGPAEII-VHGKSGFHI 712 (816)
T ss_dssp BBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEE----SSBTHHHHC-CBTTTBEEE
T ss_pred CcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEe----CCCChHHHH-ccCCcEEEe
Confidence 67777764 44455443 4566 6643 23 36899999999999996 444444444 443568777
Q ss_pred eCCCCCcchhHHHHHHHHHh----cCch-HHHHHHHHHHHH
Q 012217 395 NGDDEDVIRNEVEKLVREMM----EGEK-GKQMRNKAMEWK 430 (468)
Q Consensus 395 ~~~~~~~~~~~l~~av~~~l----~~~~-~~~~~~~a~~l~ 430 (468)
. .-+.++++++|.+++ .|++ .+.+.+++++..
T Consensus 713 ~----p~D~e~LA~aI~~lL~~Ll~d~~~~~~m~~~ar~~a 749 (816)
T 3s28_A 713 D----PYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRI 749 (816)
T ss_dssp C----TTSHHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHH
T ss_pred C----CCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHH
Confidence 6 347899999997776 6663 345555555544
No 52
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=93.53 E-value=0.18 Score=51.62 Aligned_cols=137 Identities=12% Similarity=0.050 Sum_probs=75.7
Q ss_pred CceEEEeecCCcCC-CHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChH---HhhcCC
Q 012217 269 KSVIYVNFGSFIFM-NKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQE---EVLKHP 344 (468)
Q Consensus 269 ~~vv~vs~GS~~~~-~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~---~il~~~ 344 (468)
+.++++..|.+... ..+.+.+.+..+.+.+.+++++..++. .....-.....+.+.++.+..+.++. .++..+
T Consensus 326 ~~p~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~a 402 (536)
T 3vue_A 326 KIPLIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKK---KFEKLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGA 402 (536)
T ss_dssp TSCEEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCH---HHHHHHHHHHHHSTTTEEEECSCCHHHHHHHHHHC
T ss_pred CCcEEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCc---hHHHHHHHHHhhcCCceEEEEeccHHHHHHHHHhh
Confidence 34566777777532 334444444444455666655443220 00000011223345677777766653 467788
Q ss_pred Ccceeeecc---Ch-hhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCC--C----CCcchhHHHHHHHHHh
Q 012217 345 SIGGFLTHC---GW-NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGD--D----EDVIRNEVEKLVREMM 414 (468)
Q Consensus 345 ~~~~~v~hg---G~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~--~----~~~~~~~l~~av~~~l 414 (468)
++ ||.-. |+ .+++||+++|+|+|+.... -....| ..-..|..+... + ...+.+.++++|++++
T Consensus 403 D~--~v~PS~~E~fgl~~lEAma~G~PvI~s~~g----G~~e~V-~dg~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral 475 (536)
T 3vue_A 403 DV--LAVPSRFEPCGLIQLQGMRYGTPCACASTG----GLVDTV-IEGKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAI 475 (536)
T ss_dssp SE--EEECCSCCSSCSHHHHHHHTTCCEEECSCT----HHHHHC-CBTTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHH
T ss_pred he--eecccccCCCCHHHHHHHHcCCCEEEcCCC----Cchhee-eCCCCccccccCCCceeEECCCCHHHHHHHHHHHH
Confidence 87 66432 33 4889999999999997543 233333 332345443210 0 1346788999999887
Q ss_pred c
Q 012217 415 E 415 (468)
Q Consensus 415 ~ 415 (468)
.
T Consensus 476 ~ 476 (536)
T 3vue_A 476 K 476 (536)
T ss_dssp H
T ss_pred H
Confidence 4
No 53
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=93.37 E-value=0.42 Score=46.92 Aligned_cols=75 Identities=13% Similarity=0.038 Sum_probs=56.8
Q ss_pred hcCceEecccChH---HhhcCCCcceeee---ccCh-hhHHHHH-------hcCCcEEecCCCCCcccchhhheeeceeE
Q 012217 326 KEKGFVASWCPQE---EVLKHPSIGGFLT---HCGW-NSIVESL-------CSGVPMICWPFTGDQPTNGRYVCNEWGVG 391 (468)
Q Consensus 326 ~~~~~v~~~~p~~---~il~~~~~~~~v~---hgG~-~s~~eal-------~~GvP~v~~P~~~DQ~~na~~~~~~~g~g 391 (468)
.+|+.+.+++|+. .++..+++ ||. +-|+ +++.||+ ++|+|+|+... + ..-..|
T Consensus 264 ~~~V~f~G~~~~~~l~~~~~~adv--~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v-~~~~~G 330 (406)
T 2hy7_A 264 GDNVIVYGEMKHAQTIGYIKHARF--GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------V-VGPYKS 330 (406)
T ss_dssp CTTEEEECCCCHHHHHHHHHTCSE--EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------G-TCSCSS
T ss_pred CCCEEEcCCCCHHHHHHHHHhcCE--EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------c-ccCcce
Confidence 4789999999875 47888888 553 2344 5788999 99999999855 4 332456
Q ss_pred EE-EeCCCCCcchhHHHHHHHHHhcCc
Q 012217 392 ME-INGDDEDVIRNEVEKLVREMMEGE 417 (468)
Q Consensus 392 ~~-~~~~~~~~~~~~l~~av~~~l~~~ 417 (468)
+. +. .-+.++++++|.++++|+
T Consensus 331 ~l~v~----~~d~~~la~ai~~ll~~~ 353 (406)
T 2hy7_A 331 RFGYT----PGNADSVIAAITQALEAP 353 (406)
T ss_dssp EEEEC----TTCHHHHHHHHHHHHHCC
T ss_pred EEEeC----CCCHHHHHHHHHHHHhCc
Confidence 65 54 347899999999999887
No 54
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=92.25 E-value=0.097 Score=51.77 Aligned_cols=79 Identities=14% Similarity=-0.005 Sum_probs=56.6
Q ss_pred cCceEecccChH---HhhcCCCcceeeecc---Ch-hhHHHHHhcCCcEEecCCCCCcccchhhheeeceeEEEEeCCCC
Q 012217 327 EKGFVASWCPQE---EVLKHPSIGGFLTHC---GW-NSIVESLCSGVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDE 399 (468)
Q Consensus 327 ~~~~v~~~~p~~---~il~~~~~~~~v~hg---G~-~s~~eal~~GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~ 399 (468)
+++.+.+++|+. .++..+++ ||.-. |. +++.||+++|+|+|+ -..+ ....+ +.-..|+.+.
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v-~~~~~G~lv~---- 362 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLS-NWHSNIVSLE---- 362 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGG-GTBTTEEEES----
T ss_pred CcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhh-hcCCCEEEeC----
Confidence 578888999875 47888888 66421 43 567999999999998 3222 12233 4424677775
Q ss_pred CcchhHHHHHHHHHhcCc
Q 012217 400 DVIRNEVEKLVREMMEGE 417 (468)
Q Consensus 400 ~~~~~~l~~av~~~l~~~ 417 (468)
.-++++++++|.++++|+
T Consensus 363 ~~d~~~la~ai~~ll~~~ 380 (413)
T 2x0d_A 363 QLNPENIAETLVELCMSF 380 (413)
T ss_dssp SCSHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHcCH
Confidence 357899999999999877
No 55
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=90.03 E-value=0.17 Score=51.85 Aligned_cols=44 Identities=9% Similarity=0.179 Sum_probs=29.3
Q ss_pred CCCCCCCCCCcEEEEEcC--------CCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012217 1 MESKPKACSKVHAVCIPS--------PFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 1 m~~~~~~~~~~~il~~p~--------p~~GHi~P~l~La~~L~~rGh~Vt~~t~~ 47 (468)
|.+..+. ++|||+++++ ++.|++ .-.|+++|+++||+|++++|.
T Consensus 1 ~~~~~~~-~~MkIl~vs~E~~P~~K~GGLadv--v~~L~~aL~~~G~~V~Vi~P~ 52 (536)
T 3vue_A 1 MAHHHHH-HHMNVVFVGAEMAPWSKTGGLGDV--LGGLPPAMAANGHRVMVISPR 52 (536)
T ss_dssp --------CCCEEEEECSCBTTTBCSSHHHHH--HHHHHHHHHTTTCEEEEEEEC
T ss_pred CCcccCC-CCcEEEEEEEeccchhccCcHHHH--HHHHHHHHHHcCCeEEEEecC
Confidence 4444433 4899999973 333444 568999999999999999864
No 56
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=87.54 E-value=2.6 Score=39.91 Aligned_cols=44 Identities=11% Similarity=0.141 Sum_probs=38.4
Q ss_pred cEEEEEcCCCCccHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHH
Q 012217 11 VHAVCIPSPFQSHIKAMLKLAKLLHHK--GFHITFVNTEFNHRRLL 54 (468)
Q Consensus 11 ~~il~~p~p~~GHi~P~l~La~~L~~r--Gh~Vt~~t~~~~~~~~~ 54 (468)
++|+++...+.|++.=...+.+.|+++ +.+|++++.+.+.+.++
T Consensus 1 mkILii~~~~~GD~i~~~p~l~~Lk~~~P~~~i~~l~~~~~~~l~~ 46 (348)
T 1psw_A 1 MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPLLS 46 (348)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHHHSTTCEEEEEECGGGHHHHT
T ss_pred CeEEEEeccccCHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHh
Confidence 489999988889999999999999987 99999999987766543
No 57
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=83.60 E-value=1.2 Score=42.07 Aligned_cols=39 Identities=10% Similarity=0.117 Sum_probs=32.6
Q ss_pred CcEEEEEcCC----------------CCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 10 KVHAVCIPSP----------------FQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 10 ~~~il~~p~p----------------~~GHi~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
+|+|+++... ..|.-.-...|++.|.++||+|++++...
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~v~~~~~ 57 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVFLLGAPG 57 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEEEESCTT
T ss_pred ccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEEEEecCC
Confidence 4689988765 26777888999999999999999998754
No 58
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=83.07 E-value=1.7 Score=41.60 Aligned_cols=45 Identities=16% Similarity=0.058 Sum_probs=40.2
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHH
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHK--GFHITFVNTEFNHRRLL 54 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~r--Gh~Vt~~t~~~~~~~~~ 54 (468)
..+|+++-..+.|++.=...+.+.|+++ +.+|++++.+.+.+.++
T Consensus 8 ~~~iLvi~~~~lGD~i~~~P~l~~L~~~~P~a~I~~l~~~~~~~l~~ 54 (349)
T 3tov_A 8 YKRIVVTFLMHLGDVILTTPFLEVLRKAAPHSHITYVIDEKLQQVME 54 (349)
T ss_dssp TCEEEEECCCCHHHHHTTHHHHHHHHHHCTTSEEEEEEEGGGGGGTS
T ss_pred CCEEEEEecCcccHHHHHHHHHHHHHHHCCCCEEEEEECcchhHHHh
Confidence 4699999999999999999999999997 99999999988766553
No 59
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=78.16 E-value=3.1 Score=40.38 Aligned_cols=41 Identities=17% Similarity=0.076 Sum_probs=33.6
Q ss_pred CCcEEEEEcCC--CCccHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012217 9 SKVHAVCIPSP--FQSHIKAMLKLAKLLHHKGFHITFVNTEFN 49 (468)
Q Consensus 9 ~~~~il~~p~p--~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~ 49 (468)
.+|+|+++... ..|+-..+..|++.|.++||+|++++....
T Consensus 39 ~~mkIl~v~~~~~~GG~~~~~~~l~~~L~~~G~~v~v~~~~~~ 81 (416)
T 2x6q_A 39 KGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEGP 81 (416)
T ss_dssp TTCEEEEEESCSSSSTHHHHHHHHHHHHHHTTCEEEEEECCCC
T ss_pred hccEEEEEeCCCCCCCHHHHHHHHHHHHHhCCCeEEEEEccCC
Confidence 36799888664 468888999999999999999999886543
No 60
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=77.70 E-value=1.8 Score=41.14 Aligned_cols=37 Identities=14% Similarity=0.319 Sum_probs=30.2
Q ss_pred cEEEEEcC---CCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012217 11 VHAVCIPS---PFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 11 ~~il~~p~---p~~GHi~P~l~La~~L~~rGh~Vt~~t~~ 47 (468)
|+|+++.. |..|.-.-+..|++.|+++||+|++++..
T Consensus 1 MkIl~i~~~~~~~gG~~~~~~~l~~~L~~~G~~V~v~~~~ 40 (374)
T 2iw1_A 1 MIVAFCLYKYFPFGGLQRDFMRIASTVAARGHHVRVYTQS 40 (374)
T ss_dssp -CEEEECSEECTTCHHHHHHHHHHHHHHHTTCCEEEEESE
T ss_pred CeEEEEEeecCCCcchhhHHHHHHHHHHhCCCeEEEEecC
Confidence 36777743 45778888999999999999999999875
No 61
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=76.01 E-value=1.6 Score=42.87 Aligned_cols=39 Identities=18% Similarity=0.198 Sum_probs=30.6
Q ss_pred CcEEEEEcCCCC-----ccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 10 KVHAVCIPSPFQ-----SHIKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 10 ~~~il~~p~p~~-----GHi~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
+|+|+++..... |=..-...||++|+++||+|+++++..
T Consensus 46 ~mrI~~v~~~~~p~~~~GG~~~v~~la~~L~~~GheV~Vvt~~~ 89 (413)
T 2x0d_A 46 GKRLNLLVPSINQEHMFGGISTALKLFEQFDNKKFKKRIILTDA 89 (413)
T ss_dssp SCEEEEEESCCCGGGCSHHHHHHHHHHTTSCTTTCEEEEEESSC
T ss_pred CceEEEEeCCCCccccccHHHHHHHHHHHHHHcCCceEEEEecC
Confidence 689998875321 333568999999999999999999853
No 62
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=74.75 E-value=3.4 Score=43.11 Aligned_cols=35 Identities=20% Similarity=0.263 Sum_probs=26.6
Q ss_pred HHhhcCCCcceeeec---cCh-hhHHHHHhcCCcEEecCCC
Q 012217 338 EEVLKHPSIGGFLTH---CGW-NSIVESLCSGVPMICWPFT 374 (468)
Q Consensus 338 ~~il~~~~~~~~v~h---gG~-~s~~eal~~GvP~v~~P~~ 374 (468)
..++..+++ ||.- =|+ .+.+||+++|+|+|+.-..
T Consensus 513 ~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 513 DEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp HHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred HHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 457888888 6644 344 5889999999999997553
No 63
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=73.69 E-value=4.7 Score=37.81 Aligned_cols=130 Identities=12% Similarity=0.023 Sum_probs=76.1
Q ss_pred CCceEEEeecCCc---CCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhh---cCceEecc--cCh-H
Q 012217 268 PKSVIYVNFGSFI---FMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAK---EKGFVASW--CPQ-E 338 (468)
Q Consensus 268 ~~~vv~vs~GS~~---~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~--~p~-~ 338 (468)
.++.|.+.-||.. .++.+.+.++++.|.+.|.++++..+... .....+++. .++.+++- +.+ .
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~--------e~~~~~~i~~~~~~~~l~g~~sl~el~ 248 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPH--------EEERAKRLAEGFAYVEVLPKMSLEGVA 248 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHH--------HHHHHHHHHTTCTTEEECCCCCHHHHH
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHH--------HHHHHHHHHhhCCcccccCCCCHHHHH
Confidence 3457888777753 66788999999998776777665534220 011111211 23333332 223 5
Q ss_pred HhhcCCCcceeeec-cChhhHHHHHhcCCcEEec--CCCCCc--ccchhhheeeceeEEEEe---CCCCCcchhHHHHHH
Q 012217 339 EVLKHPSIGGFLTH-CGWNSIVESLCSGVPMICW--PFTGDQ--PTNGRYVCNEWGVGMEIN---GDDEDVIRNEVEKLV 410 (468)
Q Consensus 339 ~il~~~~~~~~v~h-gG~~s~~eal~~GvP~v~~--P~~~DQ--~~na~~~~~~~g~g~~~~---~~~~~~~~~~l~~av 410 (468)
.++.++++ +|+. .|...+ |.+.|+|+|++ |..... +.... ...+. .....+++|+|.+++
T Consensus 249 ali~~a~l--~I~~DSG~~Hl--Aaa~g~P~v~lfg~t~p~~~~P~~~~--------~~~~~~~~~cm~~I~~~~V~~~i 316 (326)
T 2gt1_A 249 RVLAGAKF--VVSVDTGLSHL--TAALDRPNITVYGPTDPGLIGGYGKN--------QMVCRAPGNELSQLTANAVKQFI 316 (326)
T ss_dssp HHHHTCSE--EEEESSHHHHH--HHHTTCCEEEEESSSCHHHHCCCSSS--------EEEEECGGGCGGGCCHHHHHHHH
T ss_pred HHHHhCCE--EEecCCcHHHH--HHHcCCCEEEEECCCChhhcCCCCCC--------ceEecCCcccccCCCHHHHHHHH
Confidence 68999998 9999 444333 66699999998 321111 11100 01111 112478999999999
Q ss_pred HHHhcCc
Q 012217 411 REMMEGE 417 (468)
Q Consensus 411 ~~~l~~~ 417 (468)
+++|++.
T Consensus 317 ~~~l~~~ 323 (326)
T 2gt1_A 317 EENAEKA 323 (326)
T ss_dssp HHTTTTC
T ss_pred HHHHHHh
Confidence 9998754
No 64
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=72.79 E-value=3.3 Score=41.18 Aligned_cols=38 Identities=13% Similarity=0.203 Sum_probs=29.7
Q ss_pred cEEEEEcC---C---CCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 11 VHAVCIPS---P---FQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 11 ~~il~~p~---p---~~GHi~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
|+|++++. | ..|=-.-...|++.|+++||+|+++++..
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 1rzu_A 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGY 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEEECC
T ss_pred CeEEEEeeeeccccccccHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 47888875 2 34555677899999999999999998743
No 65
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=71.85 E-value=7.5 Score=34.11 Aligned_cols=46 Identities=9% Similarity=-0.002 Sum_probs=39.3
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhh
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKA 56 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~ 56 (468)
+.||++--.++.|=+. ...|.+.|.++|++|.++.++.....+...
T Consensus 4 ~k~IllgvTGaiaa~k-~~~ll~~L~~~g~eV~vv~T~~A~~fi~~e 49 (209)
T 3zqu_A 4 PERITLAMTGASGAQY-GLRLLDCLVQEEREVHFLISKAAQLVMATE 49 (209)
T ss_dssp CSEEEEEECSSSCHHH-HHHHHHHHHHTTCEEEEEECHHHHHHHHHH
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEECccHHHHHHHH
Confidence 4689999999999888 899999999999999999998776665543
No 66
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=71.10 E-value=3.8 Score=40.69 Aligned_cols=38 Identities=13% Similarity=0.148 Sum_probs=29.2
Q ss_pred cEEEEEcC---C---CCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 11 VHAVCIPS---P---FQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 11 ~~il~~p~---p---~~GHi~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
|+|++++. | ..|=-.-...|++.|+++||+|+++++..
T Consensus 1 MkIl~v~~~~~P~~~~GG~~~~~~~la~~L~~~G~~V~vi~~~~ 44 (485)
T 2qzs_A 1 MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAF 44 (485)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHHTTCEEEEEEECC
T ss_pred CeEEEEeeeccccccCCcHHHHHHHHHHHHHHcCCEEEEEecCc
Confidence 47888874 2 23445667789999999999999998753
No 67
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=64.66 E-value=11 Score=32.74 Aligned_cols=45 Identities=7% Similarity=0.014 Sum_probs=37.3
Q ss_pred cEEEEEcCCCCccHHHHHHHHHHHHhC-CCEEEEEeCCcchHHHHhh
Q 012217 11 VHAVCIPSPFQSHIKAMLKLAKLLHHK-GFHITFVNTEFNHRRLLKA 56 (468)
Q Consensus 11 ~~il~~p~p~~GHi~P~l~La~~L~~r-Gh~Vt~~t~~~~~~~~~~~ 56 (468)
++|++--.++.|-+. ...|.+.|.++ |++|.++.++.....+...
T Consensus 1 ~~IllgvTGsiaa~k-~~~ll~~L~~~~g~~V~vv~T~~A~~fi~~~ 46 (197)
T 1sbz_A 1 MKLIVGMTGATGAPL-GVALLQALREMPNVETHLVMSKWAKTTIELE 46 (197)
T ss_dssp CEEEEEECSSSCHHH-HHHHHHHHHTCTTCEEEEEECHHHHHHHHHH
T ss_pred CEEEEEEeChHHHHH-HHHHHHHHHhccCCEEEEEECchHHHHhHHH
Confidence 478888888888766 89999999999 9999999998766655543
No 68
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=64.54 E-value=28 Score=34.72 Aligned_cols=106 Identities=10% Similarity=0.108 Sum_probs=65.7
Q ss_pred ecccChHH---hhcCCCcceeee---ccChh-hHHHHHhcCC-----cEEecCCCCCcccchhhheeeceeEEEEeCCCC
Q 012217 332 ASWCPQEE---VLKHPSIGGFLT---HCGWN-SIVESLCSGV-----PMICWPFTGDQPTNGRYVCNEWGVGMEINGDDE 399 (468)
Q Consensus 332 ~~~~p~~~---il~~~~~~~~v~---hgG~~-s~~eal~~Gv-----P~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~ 399 (468)
.+++++.+ ++..+++ ||. .=|+| ++.||+++|+ |+|+--+.+ .+..+ ..|+.++
T Consensus 337 ~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~~l----~~g~lv~---- 402 (482)
T 1uqt_A 337 NQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AANEL----TSALIVN---- 402 (482)
T ss_dssp CSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGGTC----TTSEEEC----
T ss_pred CCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHHHh----CCeEEEC----
Confidence 46777754 6777887 554 33554 7889999998 677654322 12222 2356665
Q ss_pred CcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHhc
Q 012217 400 DVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEILLS 457 (468)
Q Consensus 400 ~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~~~~~~~ 457 (468)
.-+.++++++|.++|+++.. ..+++.++..+.+++ -+...-.+++++.+.+.
T Consensus 403 p~d~~~lA~ai~~lL~~~~~-~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~~ 454 (482)
T 1uqt_A 403 PYDRDEVAAALDRALTMSLA-ERISRHAEMLDVIVK-----NDINHWQECFISDLKQI 454 (482)
T ss_dssp TTCHHHHHHHHHHHHTCCHH-HHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHHS
T ss_pred CCCHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHhc
Confidence 35789999999999985421 223333333444333 25667777888887765
No 69
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=59.45 E-value=11 Score=33.09 Aligned_cols=42 Identities=19% Similarity=0.081 Sum_probs=35.9
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHH
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRL 53 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~ 53 (468)
+.||++.-.++.+-+. ...|.+.|.++| +|.++.++.....+
T Consensus 19 ~k~IllgvTGsiaa~k-~~~ll~~L~~~g-~V~vv~T~~A~~fv 60 (209)
T 1mvl_A 19 KPRVLLAASGSVAAIK-FGNLCHCFTEWA-EVRAVVTKSSLHFL 60 (209)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHHTTS-EEEEEECTGGGGTC
T ss_pred CCEEEEEEeCcHHHHH-HHHHHHHHhcCC-CEEEEEcchHHHhc
Confidence 5699999999998776 899999999999 99999997765443
No 70
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=58.73 E-value=12 Score=31.75 Aligned_cols=43 Identities=7% Similarity=-0.021 Sum_probs=35.4
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHH
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRL 53 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~ 53 (468)
+.||++.-.++.|=+. ...|.+.|.++|++|.++.++...+.+
T Consensus 5 ~k~IllgvTGs~aa~k-~~~ll~~L~~~g~~V~vv~T~~A~~fi 47 (175)
T 3qjg_A 5 GENVLICLCGSVNSIN-ISHYIIELKSKFDEVNVIASTNGRKFI 47 (175)
T ss_dssp CCEEEEEECSSGGGGG-HHHHHHHHTTTCSEEEEEECTGGGGGS
T ss_pred CCEEEEEEeCHHHHHH-HHHHHHHHHHCCCEEEEEECcCHHHHh
Confidence 3589888888877664 899999999999999999998665433
No 71
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=57.74 E-value=18 Score=29.07 Aligned_cols=37 Identities=16% Similarity=0.113 Sum_probs=33.7
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~ 46 (468)
+++|++.+.++-+|-....-++..|..+|++|..+-.
T Consensus 3 ~~~vvla~~~~d~HdiG~~~v~~~l~~~G~~Vi~lG~ 39 (137)
T 1ccw_A 3 KKTIVLGVIGSDCHAVGNKILDHAFTNAGFNVVNIGV 39 (137)
T ss_dssp CCEEEEEEETTCCCCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCEEEEEeCCCchhHHHHHHHHHHHHHCCCEEEECCC
Confidence 5799999999999999999999999999999996644
No 72
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=56.44 E-value=21 Score=30.62 Aligned_cols=43 Identities=16% Similarity=0.117 Sum_probs=36.8
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHh
Q 012217 12 HAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLK 55 (468)
Q Consensus 12 ~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~ 55 (468)
||++.-.++.|-+ =...|.+.|.++|++|.++.++.....+..
T Consensus 3 ~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~~i~~ 45 (189)
T 2ejb_A 3 KIALCITGASGVI-YGIKLLQVLEELDFSVDLVISRNAKVVLKE 45 (189)
T ss_dssp EEEEEECSSTTHH-HHHHHHHHHHHTTCEEEEEECHHHHHHHHH
T ss_pred EEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEChhHHHHhhH
Confidence 8999999998855 579999999999999999999877666554
No 73
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=52.74 E-value=17 Score=30.22 Aligned_cols=38 Identities=13% Similarity=0.311 Sum_probs=34.8
Q ss_pred CCcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012217 9 SKVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (468)
Q Consensus 9 ~~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~ 46 (468)
++++|++.+.++-+|-.-..-++..|..+|++|...-.
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~ 54 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGL 54 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCS
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCC
Confidence 37899999999999999999999999999999998754
No 74
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=52.55 E-value=22 Score=30.82 Aligned_cols=42 Identities=14% Similarity=0.028 Sum_probs=36.8
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchH
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHR 51 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~ 51 (468)
+.+|++.+.++-.|-....-++..|..+|++|..+-.....+
T Consensus 88 ~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~ 129 (210)
T 1y80_A 88 VGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPG 129 (210)
T ss_dssp CCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHH
T ss_pred CCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHH
Confidence 679999999999999999999999999999999886643333
No 75
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=51.90 E-value=8.9 Score=31.32 Aligned_cols=33 Identities=18% Similarity=0.265 Sum_probs=26.3
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~ 47 (468)
+.||+++-+ |++- ..+++.|.++||+|+++...
T Consensus 3 ~~~vlI~G~---G~vG--~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 3 KDHFIVCGH---SILA--INTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CSCEEEECC---SHHH--HHHHHHHHHTTCCEEEEECC
T ss_pred CCcEEEECC---CHHH--HHHHHHHHHCCCCEEEEECC
Confidence 568888843 5554 78899999999999999873
No 76
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=49.08 E-value=26 Score=31.59 Aligned_cols=38 Identities=18% Similarity=0.226 Sum_probs=34.9
Q ss_pred CCcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012217 9 SKVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (468)
Q Consensus 9 ~~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~ 46 (468)
.+.+|++.+.++-.|-....-++..|..+|++|..+-.
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~ 159 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGR 159 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCC
Confidence 37899999999999999999999999999999987754
No 77
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=48.24 E-value=18 Score=33.81 Aligned_cols=92 Identities=12% Similarity=0.043 Sum_probs=58.4
Q ss_pred CCceEEEeecC-C---cCCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhh--------cCce-Eecc
Q 012217 268 PKSVIYVNFGS-F---IFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAK--------EKGF-VASW 334 (468)
Q Consensus 268 ~~~vv~vs~GS-~---~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~--------~~~~-v~~~ 334 (468)
.+++|.+.-|| . ..++.+.+.++++.|.+.+.++++. +.+. + ....+.+. .++. +.+.
T Consensus 179 ~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~-g~~~---e-----~~~~~~i~~~~~~~~~~~~~~l~g~ 249 (348)
T 1psw_A 179 ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLF-GSAK---D-----HEAGNEILAALNTEQQAWCRNLAGE 249 (348)
T ss_dssp SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEEC-CCGG---G-----HHHHHHHHTTSCHHHHTTEEECTTT
T ss_pred CCcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEE-eChh---h-----HHHHHHHHHhhhhccccceEeccCc
Confidence 45588888888 3 2567889999999997778777654 3220 0 11111111 1232 2222
Q ss_pred c--Ch-HHhhcCCCcceeeeccChhhHHHHHhcCCcEEec
Q 012217 335 C--PQ-EEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICW 371 (468)
Q Consensus 335 ~--p~-~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~ 371 (468)
. .+ ..++.++++ +|+.- .|++.-|.+.|+|+|++
T Consensus 250 ~sl~e~~ali~~a~l--~I~~D-sg~~HlAaa~g~P~v~l 286 (348)
T 1psw_A 250 TQLDQAVILIAACKA--IVTND-SGLMHVAAALNRPLVAL 286 (348)
T ss_dssp SCHHHHHHHHHTSSE--EEEES-SHHHHHHHHTTCCEEEE
T ss_pred CCHHHHHHHHHhCCE--EEecC-CHHHHHHHHcCCCEEEE
Confidence 2 22 568999998 99974 45566688899999986
No 78
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=46.83 E-value=68 Score=32.01 Aligned_cols=111 Identities=9% Similarity=0.017 Sum_probs=69.1
Q ss_pred CceEecccChH---HhhcCCCcceeee---ccChhh-HHHHHhcC---CcEEecCCCCCcccchhhheeeceeEEEEeCC
Q 012217 328 KGFVASWCPQE---EVLKHPSIGGFLT---HCGWNS-IVESLCSG---VPMICWPFTGDQPTNGRYVCNEWGVGMEINGD 397 (468)
Q Consensus 328 ~~~v~~~~p~~---~il~~~~~~~~v~---hgG~~s-~~eal~~G---vP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~ 397 (468)
.+.+...+|+. .++..+++ ||. +=|+|- ..|++++| .|+|+--+.+ .+..+ . .-|+.++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l-~--~~allVn-- 421 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVL-G--EYCRSVN-- 421 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHH-G--GGSEEEC--
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHh-C--CCEEEEC--
Confidence 45666777764 46667777 443 458875 57999996 6666553332 12222 1 1467776
Q ss_pred CCCcchhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHhc
Q 012217 398 DEDVIRNEVEKLVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEILLS 457 (468)
Q Consensus 398 ~~~~~~~~l~~av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~~~~~~~ 457 (468)
-.+.++++++|.++|+++.. +-+++.+++.+.+++ -+...=.++|++.|...
T Consensus 422 --P~D~~~lA~AI~~aL~m~~~-er~~r~~~~~~~V~~-----~d~~~W~~~fl~~L~~~ 473 (496)
T 3t5t_A 422 --PFDLVEQAEAISAALAAGPR-QRAEAAARRRDAARP-----WTLEAWVQAQLDGLAAD 473 (496)
T ss_dssp --TTBHHHHHHHHHHHHHCCHH-HHHHHHHHHHHHHTT-----CBHHHHHHHHHHHHHHH
T ss_pred --CCCHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHhhc
Confidence 35899999999999986521 334444444444432 35667778888888654
No 79
>1kjn_A MTH0777; hypotethical protein, structural genomics, PSI, protein structure initiative; 2.20A {Methanothermobacterthermautotrophicus} SCOP: c.115.1.1
Probab=46.68 E-value=19 Score=29.43 Aligned_cols=47 Identities=21% Similarity=0.246 Sum_probs=34.4
Q ss_pred CcEEEEE-cCC-CCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhh
Q 012217 10 KVHAVCI-PSP-FQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKA 56 (468)
Q Consensus 10 ~~~il~~-p~p-~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~ 56 (468)
.|+++++ -.| ..--+--.+-++..|.++||+|++..++.....++-+
T Consensus 6 ~m~~LilLGCPE~Pvq~p~~lYl~~~Lk~~G~~v~VA~npAAlkLleva 54 (157)
T 1kjn_A 6 TGKALMVLGCPESPVQIPLAIYTSHKLKKKGFRVTVTANPAALRLVQVA 54 (157)
T ss_dssp CCEEEEECCCSCSTTHHHHHHHHHHHHHHTTCEEEEEECHHHHHHHHHH
T ss_pred ceeeeEEecCCCCcchhhHHHHHHHHHHhcCCeeEEecCHHHHhheecc
Confidence 4454443 344 3344555788999999999999999999888877765
No 80
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=46.50 E-value=22 Score=32.48 Aligned_cols=32 Identities=22% Similarity=0.315 Sum_probs=24.5
Q ss_pred cEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012217 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (468)
Q Consensus 11 ~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~ 46 (468)
|+|++. ++.|.+= -+|+++|.++||+|+.++-
T Consensus 1 MkILVT--GatGfIG--~~L~~~L~~~G~~V~~l~R 32 (298)
T 4b4o_A 1 MRVLVG--GGTGFIG--TALTQLLNARGHEVTLVSR 32 (298)
T ss_dssp CEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred CEEEEE--CCCCHHH--HHHHHHHHHCCCEEEEEEC
Confidence 365443 7778775 4688999999999999874
No 81
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=45.84 E-value=1.5e+02 Score=25.86 Aligned_cols=152 Identities=13% Similarity=0.084 Sum_probs=80.5
Q ss_pred hccccCCCCceEEEeecCCcCCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhh-cCceEecccChHH
Q 012217 261 QWLDCKEPKSVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAK-EKGFVASWCPQEE 339 (468)
Q Consensus 261 ~wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~p~~~ 339 (468)
-|++-. .+.++.|..|.+. ...++.|.+.|..+.++... +.+.+.+... .++.++...-+..
T Consensus 25 ifl~L~-gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~---------~~~~l~~l~~~~~i~~i~~~~~~~ 87 (223)
T 3dfz_A 25 VMLDLK-GRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPT---------VSAEINEWEAKGQLRVKRKKVGEE 87 (223)
T ss_dssp EEECCT-TCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSS---------CCHHHHHHHHTTSCEEECSCCCGG
T ss_pred cEEEcC-CCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCC---------CCHHHHHHHHcCCcEEEECCCCHh
Confidence 356543 4568888876433 44556677778887766432 2233332222 3444443222334
Q ss_pred hhcCCCcceeeeccChhhHHHHHh----cCCcEEecCCCCCcccchhhh----eeeceeEEEEeCC-CCCcchhHHHHHH
Q 012217 340 VLKHPSIGGFLTHCGWNSIVESLC----SGVPMICWPFTGDQPTNGRYV----CNEWGVGMEINGD-DEDVIRNEVEKLV 410 (468)
Q Consensus 340 il~~~~~~~~v~hgG~~s~~eal~----~GvP~v~~P~~~DQ~~na~~~----~~~~g~g~~~~~~-~~~~~~~~l~~av 410 (468)
.|...++ +|.--|.-.+.+.++ .|+|+-+ .|.+..+..+ +++-++-+.+.+. ..-.-+..|++.|
T Consensus 88 dL~~adL--VIaAT~d~~~N~~I~~~ak~gi~VNv----vD~p~~~~f~~Paiv~rg~l~iaIST~G~sP~la~~iR~~i 161 (223)
T 3dfz_A 88 DLLNVFF--IVVATNDQAVNKFVKQHIKNDQLVNM----ASSFSDGNIQIPAQFSRGRLSLAISTDGASPLLTKRIKEDL 161 (223)
T ss_dssp GSSSCSE--EEECCCCTHHHHHHHHHSCTTCEEEC---------CCSEECCEEEEETTEEEEEECTTSCHHHHHHHHHHH
T ss_pred HhCCCCE--EEECCCCHHHHHHHHHHHhCCCEEEE----eCCcccCeEEEeeEEEeCCEEEEEECCCCCcHHHHHHHHHH
Confidence 5666666 888777766655544 3555433 3665544322 2444555666541 1123345666666
Q ss_pred HHHhcCchHHHHHHHHHHHHHHHHHH
Q 012217 411 REMMEGEKGKQMRNKAMEWKGLAEEA 436 (468)
Q Consensus 411 ~~~l~~~~~~~~~~~a~~l~~~~~~a 436 (468)
.+++.. +-..+-+.+.++++.+++.
T Consensus 162 e~~lp~-~~~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 162 SSNYDE-SYTQYTQFLYECRVLIHRL 186 (223)
T ss_dssp HHHSCT-HHHHHHHHHHHHHHHHHHC
T ss_pred HHHccH-HHHHHHHHHHHHHHHHHHH
Confidence 666633 2236778888888888764
No 82
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=45.69 E-value=28 Score=30.88 Aligned_cols=39 Identities=18% Similarity=0.128 Sum_probs=35.5
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
++.|++..-|+.|-..-++.+|..|+++|++|.++....
T Consensus 6 ~l~I~~~~kgGvGKTt~a~~la~~l~~~G~~V~v~d~D~ 44 (228)
T 2r8r_A 6 RLKVFLGAAPGVGKTYAMLQAAHAQLRQGVRVMAGVVET 44 (228)
T ss_dssp CEEEEEESSTTSSHHHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred eEEEEEECCCCCcHHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 678999999999999999999999999999998887654
No 83
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=45.60 E-value=32 Score=32.40 Aligned_cols=73 Identities=7% Similarity=0.116 Sum_probs=54.2
Q ss_pred CCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHH
Q 012217 282 MNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVES 361 (468)
Q Consensus 282 ~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~ea 361 (468)
.+.+...++.+++.+...+.||.++++. +-.++.++++...|-.+|.. ||-+.-...++-+
T Consensus 62 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~-----------------g~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~a 122 (331)
T 4e5s_A 62 SISSRVQDLHEAFRDPNVKAILTTLGGY-----------------NSNGLLKYLDYDLIRENPKF--FCGYSDITALNNA 122 (331)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCS-----------------CGGGGGGGCCHHHHHTSCCE--EEECGGGHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEccccc-----------------cHHHHHhhcChhHHHhCCeE--EEEecchHHHHHH
Confidence 3456788899999998899999988662 22345666666777677776 8888887777777
Q ss_pred Hh--cCCcEEecCC
Q 012217 362 LC--SGVPMICWPF 373 (468)
Q Consensus 362 l~--~GvP~v~~P~ 373 (468)
++ .|+..+-=|+
T Consensus 123 l~~~~G~~t~hGp~ 136 (331)
T 4e5s_A 123 IYTKTGLVTYSGPH 136 (331)
T ss_dssp HHHHHCBCEEECCC
T ss_pred HHHhhCCcEEEccc
Confidence 76 5887777666
No 84
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=43.25 E-value=25 Score=30.49 Aligned_cols=40 Identities=15% Similarity=-0.067 Sum_probs=33.1
Q ss_pred CcEEEEEcCCCCccHH-HHHHHHHHHHhCCCEEEEEeCCcch
Q 012217 10 KVHAVCIPSPFQSHIK-AMLKLAKLLHHKGFHITFVNTEFNH 50 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~-P~l~La~~L~~rGh~Vt~~t~~~~~ 50 (468)
..||++--.++ +... -.+.|.+.|.++|++|.++.++...
T Consensus 7 ~k~I~lgiTGs-~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~ 47 (201)
T 3lqk_A 7 GKHVGFGLTGS-HCTYHEVLPQMERLVELGAKVTPFVTHTVQ 47 (201)
T ss_dssp TCEEEEECCSC-GGGGGGTHHHHHHHHHTTCEEEEECSSCSC
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHhhCCCEEEEEEChhHH
Confidence 45888888888 4555 7899999999999999999987544
No 85
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=42.80 E-value=42 Score=31.83 Aligned_cols=98 Identities=15% Similarity=0.169 Sum_probs=49.2
Q ss_pred ceEEEeecCCcCCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCC----CC----CCCc-hhHHHHh-hcCceEe-cc---c
Q 012217 270 SVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTG----ET----ADLP-AEFEVKA-KEKGFVA-SW---C 335 (468)
Q Consensus 270 ~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~----~~----~~~~-~~~~~~~-~~~~~v~-~~---~ 335 (468)
.+|+.+.||-....+ ...+++.|.+.|.+++|+......+. .. ..++ .++..+. ..+.... .+ +
T Consensus 4 ~i~i~~GGTgGHi~p--alala~~L~~~g~~V~~vg~~~g~e~~~v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 81 (365)
T 3s2u_A 4 NVLIMAGGTGGHVFP--ALACAREFQARGYAVHWLGTPRGIENDLVPKAGLPLHLIQVSGLRGKGLKSLVKAPLELLKSL 81 (365)
T ss_dssp EEEEECCSSHHHHHH--HHHHHHHHHHTTCEEEEEECSSSTHHHHTGGGTCCEEECC--------------CHHHHHHHH
T ss_pred cEEEEcCCCHHHHHH--HHHHHHHHHhCCCEEEEEECCchHhhchhhhcCCcEEEEECCCcCCCCHHHHHHHHHHHHHHH
Confidence 377777777543222 34578888888999999875431100 00 0011 0110000 0000000 00 0
Q ss_pred Ch-HHhhc--CCCcceeeeccChhhH---HHHHhcCCcEEec
Q 012217 336 PQ-EEVLK--HPSIGGFLTHCGWNSI---VESLCSGVPMICW 371 (468)
Q Consensus 336 p~-~~il~--~~~~~~~v~hgG~~s~---~eal~~GvP~v~~ 371 (468)
-+ ..++. .|++ +|++||+-+. ..|-..|+|+++.
T Consensus 82 ~~~~~~l~~~~PDv--Vi~~g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 82 FQALRVIRQLRPVC--VLGLGGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp HHHHHHHHHHCCSE--EEECSSSTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHhcCCCE--EEEcCCcchHHHHHHHHHcCCCEEEE
Confidence 11 12332 6787 9999998664 5677889999963
No 86
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=42.40 E-value=24 Score=33.13 Aligned_cols=39 Identities=13% Similarity=0.062 Sum_probs=30.8
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhC-C-CEEEEEeCCcc
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHK-G-FHITFVNTEFN 49 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~r-G-h~Vt~~t~~~~ 49 (468)
+|+|+++. +..++......++++|+++ | |+|.++++...
T Consensus 8 ~mkIl~v~-~~~~~~~~~~~l~~~L~~~~~~~~v~~~~~~~~ 48 (375)
T 3beo_A 8 RLKVMTIF-GTRPEAIKMAPLVLELQKHPEKIESIVTVTAQH 48 (375)
T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHHTTCTTTEEEEEEECCSS
T ss_pred CceEEEEe-cCcHHHHHHHHHHHHHHhCCCCCCeEEEEcCCC
Confidence 57999997 4577888888999999987 5 88877776543
No 87
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=42.14 E-value=25 Score=30.64 Aligned_cols=40 Identities=8% Similarity=-0.163 Sum_probs=31.3
Q ss_pred CcEEEEEcCCCCccHHH-HHHHHHHHHhCCCEEEEEeCCcch
Q 012217 10 KVHAVCIPSPFQSHIKA-MLKLAKLLHHKGFHITFVNTEFNH 50 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P-~l~La~~L~~rGh~Vt~~t~~~~~ 50 (468)
..||++--.++ +..+- ...|.+.|.++|++|.++.++...
T Consensus 5 ~k~IllgiTGs-iaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 5 GKRIGFGFTGS-HCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp TCEEEEEECSC-GGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CCEEEEEEECh-HHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 45888888887 55665 889999999999999999997655
No 88
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=41.80 E-value=26 Score=32.55 Aligned_cols=45 Identities=9% Similarity=0.014 Sum_probs=40.0
Q ss_pred cEEEEEcCCCCccHHHHHHHHHHHHhC--CCEEEEEeCCcchHHHHh
Q 012217 11 VHAVCIPSPFQSHIKAMLKLAKLLHHK--GFHITFVNTEFNHRRLLK 55 (468)
Q Consensus 11 ~~il~~p~p~~GHi~P~l~La~~L~~r--Gh~Vt~~t~~~~~~~~~~ 55 (468)
++|+++-..+.||+.=...+.+.|+++ +.+|++++.+.+.+.++.
T Consensus 1 ~~ILii~~~~iGD~i~~~p~l~~Lk~~~P~a~I~~l~~~~~~~l~~~ 47 (326)
T 2gt1_A 1 MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSW 47 (326)
T ss_dssp CEEEEECCCCHHHHHHHHHHHHHHHHHSTTCEEEEEEEGGGTHHHHT
T ss_pred CeEEEEeccccchHHhHHHHHHHHHHhCCCCEEEEEEehhhhHHHhc
Confidence 489999999999999999999999997 999999999887776544
No 89
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=41.41 E-value=22 Score=30.33 Aligned_cols=42 Identities=5% Similarity=-0.073 Sum_probs=34.1
Q ss_pred cEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHH
Q 012217 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRL 53 (468)
Q Consensus 11 ~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~ 53 (468)
.||++.-.++.|=+ -...+.+.|.++|++|.++.++...+.+
T Consensus 3 k~IllgvTGs~aa~-k~~~l~~~L~~~g~~V~vv~T~~A~~fi 44 (181)
T 1g63_A 3 GKLLICATASINVI-NINHYIVELKQHFDEVNILFSPSSKNFI 44 (181)
T ss_dssp CCEEEEECSCGGGG-GHHHHHHHHTTTSSCEEEEECGGGGGTS
T ss_pred CEEEEEEECHHHHH-HHHHHHHHHHHCCCEEEEEEchhHHHHH
Confidence 47888888887766 6789999999999999999997665433
No 90
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=41.24 E-value=43 Score=29.23 Aligned_cols=39 Identities=15% Similarity=0.134 Sum_probs=35.3
Q ss_pred CCcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012217 9 SKVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 9 ~~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~ 47 (468)
.+.+|++.+.++-.|-....-++..|..+|++|..+-..
T Consensus 91 ~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~ 129 (215)
T 3ezx_A 91 EAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVD 129 (215)
T ss_dssp -CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSS
T ss_pred CCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCC
Confidence 368999999999999999999999999999999988554
No 91
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=41.24 E-value=21 Score=30.83 Aligned_cols=43 Identities=9% Similarity=-0.115 Sum_probs=35.5
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHH
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRL 53 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~ 53 (468)
..||++.-.++.|=+. ...|.+.|.++|++|.++.++.....+
T Consensus 8 ~k~IllgvTGs~aa~k-~~~l~~~L~~~g~~V~vv~T~~A~~fi 50 (194)
T 1p3y_1 8 DKKLLIGICGSISSVG-ISSYLLYFKSFFKEIRVVMTKTAEDLI 50 (194)
T ss_dssp GCEEEEEECSCGGGGG-THHHHHHHTTTSSEEEEEECHHHHHHS
T ss_pred CCEEEEEEECHHHHHH-HHHHHHHHHHCCCEEEEEEchhHHHHH
Confidence 4589888888887775 789999999999999999997655443
No 92
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=40.63 E-value=24 Score=33.39 Aligned_cols=96 Identities=13% Similarity=0.155 Sum_probs=59.0
Q ss_pred CCceEEEeecCC---cCCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceE-ecc--cC-hHHh
Q 012217 268 PKSVIYVNFGSF---IFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFV-ASW--CP-QEEV 340 (468)
Q Consensus 268 ~~~vv~vs~GS~---~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~--~p-~~~i 340 (468)
.+++|.+.-||. ..++.+.+.++++.|.+.|.++++ ++... + ..+-+.+.+..+.++.. .+- +. -..+
T Consensus 184 ~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl-~g~~~---e-~~~~~~i~~~~~~~~~~l~g~~sl~e~~al 258 (349)
T 3tov_A 184 TDILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVF-FGGPM---D-LEMVQPVVEQMETKPIVATGKFQLGPLAAA 258 (349)
T ss_dssp TCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEE-CCCTT---T-HHHHHHHHHTCSSCCEECTTCCCHHHHHHH
T ss_pred CCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEE-EeCcc---h-HHHHHHHHHhcccccEEeeCCCCHHHHHHH
Confidence 356888888875 366788999999998766888776 44321 0 00111222222333332 222 22 3468
Q ss_pred hcCCCcceeeeccChhhHHHHHhcCCcEEec
Q 012217 341 LKHPSIGGFLTHCGWNSIVESLCSGVPMICW 371 (468)
Q Consensus 341 l~~~~~~~~v~hgG~~s~~eal~~GvP~v~~ 371 (468)
+.++++ +|+.-. |.+.=|.+.|+|+|++
T Consensus 259 i~~a~~--~i~~Ds-G~~HlAaa~g~P~v~l 286 (349)
T 3tov_A 259 MNRCNL--LITNDS-GPMHVGISQGVPIVAL 286 (349)
T ss_dssp HHTCSE--EEEESS-HHHHHHHTTTCCEEEE
T ss_pred HHhCCE--EEECCC-CHHHHHHhcCCCEEEE
Confidence 999998 999832 3344488899999997
No 93
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=39.92 E-value=19 Score=28.23 Aligned_cols=33 Identities=21% Similarity=0.341 Sum_probs=24.7
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~ 47 (468)
.++|+++-. |.+- ..+++.|.++||+|+++...
T Consensus 4 ~m~i~IiG~---G~iG--~~~a~~L~~~g~~v~~~d~~ 36 (140)
T 1lss_A 4 GMYIIIAGI---GRVG--YTLAKSLSEKGHDIVLIDID 36 (140)
T ss_dssp -CEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECC---CHHH--HHHHHHHHhCCCeEEEEECC
Confidence 568888833 6664 35788999999999998753
No 94
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=38.16 E-value=46 Score=31.17 Aligned_cols=73 Identities=4% Similarity=0.107 Sum_probs=51.5
Q ss_pred CCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHH
Q 012217 282 MNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVES 361 (468)
Q Consensus 282 ~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~ea 361 (468)
.+.+...++.+++.+...+.||..+++. +-.++.++++...|-.||.. ||-..-..+++-+
T Consensus 62 td~~Ra~dL~~a~~Dp~i~aI~~~rGG~-----------------g~~rlL~~LD~~~i~~~PK~--~~GySDiT~L~~a 122 (327)
T 4h1h_A 62 SIRSRVADIHEAFNDSSVKAILTVIGGF-----------------NSNQLLPYLDYDLISENPKI--LCGFSDITALATA 122 (327)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCS-----------------CGGGGGGGCCHHHHHHSCCE--EEECTTHHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcCCch-----------------hHHHHhhhcchhhhccCCeE--EEecccccHHHHH
Confidence 3456788899999999999999987652 22355666677777777766 7777777777666
Q ss_pred Hh--cCCcEEecCC
Q 012217 362 LC--SGVPMICWPF 373 (468)
Q Consensus 362 l~--~GvP~v~~P~ 373 (468)
++ .|+..+.=|+
T Consensus 123 l~~~~g~~t~hGp~ 136 (327)
T 4h1h_A 123 IYTQTELITYSGAH 136 (327)
T ss_dssp HHHHHCBCEEECCC
T ss_pred HHHhcCeEEEeCcc
Confidence 64 4666665555
No 95
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=38.03 E-value=36 Score=27.60 Aligned_cols=33 Identities=15% Similarity=0.207 Sum_probs=25.2
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~ 47 (468)
..+|+++-. |.+- ..+++.|.++|++|+++...
T Consensus 19 ~~~v~IiG~---G~iG--~~la~~L~~~g~~V~vid~~ 51 (155)
T 2g1u_A 19 SKYIVIFGC---GRLG--SLIANLASSSGHSVVVVDKN 51 (155)
T ss_dssp CCEEEEECC---SHHH--HHHHHHHHHTTCEEEEEESC
T ss_pred CCcEEEECC---CHHH--HHHHHHHHhCCCeEEEEECC
Confidence 568998854 4443 55788999999999998763
No 96
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=37.28 E-value=54 Score=30.87 Aligned_cols=73 Identities=11% Similarity=0.188 Sum_probs=56.2
Q ss_pred CCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHH
Q 012217 282 MNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVES 361 (468)
Q Consensus 282 ~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~ea 361 (468)
.+.+...++.+++.+...+.||.++++. +-.++.++++...|-.+|.. ||-+.-...++-+
T Consensus 63 ~d~~Ra~dL~~a~~Dp~i~aI~~~rGG~-----------------g~~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~a 123 (336)
T 3sr3_A 63 SIQERAKELNALIRNPNVSCIMSTIGGM-----------------NSNSLLPYIDYDAFQNNPKI--MIGYSDATALLLG 123 (336)
T ss_dssp CHHHHHHHHHHHHHCTTEEEEEESCCCS-----------------CGGGGGGGSCHHHHHHSCCE--EEECGGGHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEccccc-----------------cHHHHhhhcChhHHhhCCeE--EEEechHHHHHHH
Confidence 3456788899999998899999988662 22356667777777778877 8888888888888
Q ss_pred Hh--cCCcEEecCC
Q 012217 362 LC--SGVPMICWPF 373 (468)
Q Consensus 362 l~--~GvP~v~~P~ 373 (468)
++ .|+..+-=|+
T Consensus 124 l~~~~G~~t~hGp~ 137 (336)
T 3sr3_A 124 IYAKTGIPTFYGPA 137 (336)
T ss_dssp HHHHHCCCEEECCC
T ss_pred HHHhcCceEEECCh
Confidence 86 5888888877
No 97
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=37.16 E-value=56 Score=30.81 Aligned_cols=34 Identities=9% Similarity=0.245 Sum_probs=24.4
Q ss_pred eEEEeecCCcCCCHHHHHHHHHHHHcCCCCEEEEEc
Q 012217 271 VIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIR 306 (468)
Q Consensus 271 vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~ 306 (468)
++++++|+.... ..+..++++|.+.|.++.+...
T Consensus 7 il~~~~~~~Ghv--~~~~~La~~L~~~GheV~v~~~ 40 (402)
T 3ia7_A 7 ILFANVQGHGHV--YPSLGLVSELARRGHRITYVTT 40 (402)
T ss_dssp EEEECCSSHHHH--HHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEeCCCCccc--ccHHHHHHHHHhCCCEEEEEcC
Confidence 778887765432 3356788888888988888765
No 98
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=37.11 E-value=27 Score=31.78 Aligned_cols=50 Identities=18% Similarity=0.235 Sum_probs=35.8
Q ss_pred eeeeccChhhHHHHHhc------CCcEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHHhcC
Q 012217 348 GFLTHCGWNSIVESLCS------GVPMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREMMEG 416 (468)
Q Consensus 348 ~~v~hgG~~s~~eal~~------GvP~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~l~~ 416 (468)
++|.=||-||+.+++.. ++|++++|.. .+|. + ..+.++++.++++.++++
T Consensus 38 ~vv~lGGDGT~l~aa~~~~~~~~~~PilGIn~G------------~lgf---l----~~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 38 IVISIGGDGTFLSAFHQYEERLDEIAFIGIHTG------------HLGF---Y----ADWRPAEADKLVKLLAKG 93 (272)
T ss_dssp EEEEEESHHHHHHHHHHTGGGTTTCEEEEEESS------------SCCS---S----CCBCGGGHHHHHHHHHTT
T ss_pred EEEEEcCcHHHHHHHHHHhhcCCCCCEEEEeCC------------CCCc---C----CcCCHHHHHHHHHHHHcC
Confidence 49999999999999864 8899988751 0121 1 134577788888888765
No 99
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=35.86 E-value=2.1e+02 Score=26.05 Aligned_cols=102 Identities=11% Similarity=0.085 Sum_probs=65.1
Q ss_pred HHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHHHhcCCc
Q 012217 288 IEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVP 367 (468)
Q Consensus 288 ~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP 367 (468)
.++++.|++.+..+++..+.. ..+|+.+.+..+.++.=+ ||+. .=...|++....|+.+|+.
T Consensus 155 ~~~~~~l~~~~~Dlivlagym------~il~~~~l~~~~~~~iNi----------HpSl--LP~~rG~~p~~~Ai~~G~k 216 (287)
T 3nrb_A 155 SQIKNIVTQSQADLIVLARYM------QILSDDLSAFLSGRCINI----------HHSF--LPGFKGAKPYHQAHTRGVK 216 (287)
T ss_dssp HHHHHHHHHHTCSEEEESSCC------SCCCHHHHHHHTTSEEEE----------ESSC--TTTTCSSCHHHHHHHHTCS
T ss_pred HHHHHHHHHhCCCEEEhhhhh------hhcCHHHHhhccCCeEEE----------Cccc--ccCCCCchHHHHHHHcCCC
Confidence 457778888788888887754 458888877665433211 2222 2224589999999999999
Q ss_pred EEecCCCC--CcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHH
Q 012217 368 MICWPFTG--DQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREM 413 (468)
Q Consensus 368 ~v~~P~~~--DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~ 413 (468)
..++=.+. +..+-+..+.++ -+.+. ..-|.++|.+.+.++
T Consensus 217 ~tG~Tvh~v~~~lD~GpIi~Q~---~v~i~---~~dt~~~L~~r~~~~ 258 (287)
T 3nrb_A 217 LIGATAHFVTADLDEGPIIAQD---VEHVS---HRDSAEDLVRKGRDI 258 (287)
T ss_dssp EEEEEEEECCSSSSCCCEEEEE---EEECC---TTCCHHHHHHHHHHH
T ss_pred eEEEEEEEECCCCcCCCEEEEE---EEecC---CCCCHHHHHHHHHHH
Confidence 88876633 334444444222 34444 456788888777654
No 100
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=35.63 E-value=60 Score=30.21 Aligned_cols=75 Identities=13% Similarity=0.197 Sum_probs=57.6
Q ss_pred CCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhc-CCCcceeeeccChhhHH
Q 012217 281 FMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLK-HPSIGGFLTHCGWNSIV 359 (468)
Q Consensus 281 ~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~-~~~~~~~v~hgG~~s~~ 359 (468)
..+.+...++.+++.+...+.||.++++. +-..+.++++...+-. +|.. ||-+.-...++
T Consensus 63 gtd~~Ra~dL~~a~~Dp~i~aI~~~rGGy-----------------ga~rlLp~LD~~~i~~a~PK~--~iGySDiTaL~ 123 (311)
T 1zl0_A 63 GTVEQRLEDLHNAFDMPDITAVWCLRGGY-----------------GCGQLLPGLDWGRLQAASPRP--LIGFSDISVLL 123 (311)
T ss_dssp SCHHHHHHHHHHHHHSTTEEEEEESCCSS-----------------CGGGGTTTCCHHHHHHSCCCC--EEECGGGHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEccCCc-----------------CHHHHhhccchhhhhccCCCE--EEEEchhHHHH
Confidence 34567788899999998899999988662 2235566777777766 8887 99998888888
Q ss_pred HHHh-cCCcEEecCCC
Q 012217 360 ESLC-SGVPMICWPFT 374 (468)
Q Consensus 360 eal~-~GvP~v~~P~~ 374 (468)
-+++ .|++.+-=|+.
T Consensus 124 ~al~~~G~~t~hGp~~ 139 (311)
T 1zl0_A 124 SAFHRHGLPAIHGPVA 139 (311)
T ss_dssp HHHHHTTCCEEECCCG
T ss_pred HHHHHcCCcEEECHhh
Confidence 8886 48888888864
No 101
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=35.61 E-value=2.7e+02 Score=27.95 Aligned_cols=28 Identities=21% Similarity=0.379 Sum_probs=23.2
Q ss_pred cCCCcceeeeccChh------hHHHHHhcCCcEEec
Q 012217 342 KHPSIGGFLTHCGWN------SIVESLCSGVPMICW 371 (468)
Q Consensus 342 ~~~~~~~~v~hgG~~------s~~eal~~GvP~v~~ 371 (468)
..+.+ +++|.|-| .++||-+.++|+|++
T Consensus 70 G~pgv--~~~TsGpG~~N~~~gia~A~~d~vPll~i 103 (556)
T 3hww_A 70 KQPVA--VIVTSGTAVANLYPALIEAGLTGEKLILL 103 (556)
T ss_dssp CSCEE--EEECSSHHHHTTHHHHHHHHHHCCCEEEE
T ss_pred CCCEE--EEECCCcHHHhhhHHHHHHHHhCCCeEEE
Confidence 34555 89999965 788999999999997
No 102
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=35.32 E-value=1.2e+02 Score=30.85 Aligned_cols=25 Identities=16% Similarity=0.361 Sum_probs=21.8
Q ss_pred ceeeeccC------hhhHHHHHhcCCcEEec
Q 012217 347 GGFLTHCG------WNSIVESLCSGVPMICW 371 (468)
Q Consensus 347 ~~~v~hgG------~~s~~eal~~GvP~v~~ 371 (468)
+++++|+| .+.++||-+.++|+|++
T Consensus 70 ~v~~~tsGpG~~N~~~gl~~A~~~~vPll~I 100 (590)
T 1v5e_A 70 GVTVGSGGPGASHLINGLYDAAMDNIPVVAI 100 (590)
T ss_dssp CEEEECTTHHHHTTHHHHHHHHHHTCCEEEE
T ss_pred EEEEeCcChHHHHHHHHHHHHHhcCCCEEEE
Confidence 34999998 66889999999999997
No 103
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=34.93 E-value=29 Score=30.26 Aligned_cols=43 Identities=19% Similarity=0.179 Sum_probs=33.5
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHh-CCCEEEEEeCCcchHHH
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHH-KGFHITFVNTEFNHRRL 53 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~-rGh~Vt~~t~~~~~~~~ 53 (468)
+.||++.-.++.+=+ -...|.+.|.+ +|++|.++.++.....+
T Consensus 19 ~k~IllgvTGsiaa~-k~~~lv~~L~~~~g~~V~vv~T~~A~~fi 62 (206)
T 1qzu_A 19 KFHVLVGVTGSVAAL-KLPLLVSKLLDIPGLEVAVVTTERAKHFY 62 (206)
T ss_dssp SEEEEEEECSSGGGG-THHHHHHHHC---CEEEEEEECTGGGGSS
T ss_pred CCEEEEEEeChHHHH-HHHHHHHHHhcccCCEEEEEECHhHHHHh
Confidence 568999888888755 46999999999 89999999998765443
No 104
>1w2w_B 5-methylthioribose-1-phosphate isomerase; EIF2B, methionine salvage pathway, translation initiation, oxidoreductase; 1.75A {Saccharomyces cerevisiae} SCOP: c.124.1.5
Probab=34.30 E-value=46 Score=28.56 Aligned_cols=72 Identities=11% Similarity=-0.027 Sum_probs=42.1
Q ss_pred HHHHHHhCCCEEEEEeCCcchHHHHhhhcCCCCCCCCCeeEEeCCC-CCCCCCCCCCCcCCCCCCCcccchHHHHHHHcC
Q 012217 30 LAKLLHHKGFHITFVNTEFNHRRLLKARGQHSLDGLPSFRFEAIPD-GLPASSDESPTAQDAYSLDGFLPFTITAAQQLG 108 (468)
Q Consensus 30 La~~L~~rGh~Vt~~t~~~~~~~~~~~~~~~~~~~~~gi~f~~l~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~vA~~lg 108 (468)
+|++|.+.|..||+++-..-...+.+. ..+++.+-+.- .+-.. -... .-.-......+|+.+|
T Consensus 22 ta~eL~~~gI~vtlI~Dsa~~~~m~~~--------~~~Vd~VivGAd~v~~n---G~v~-----nkiGT~~~Al~Ak~~~ 85 (191)
T 1w2w_B 22 TAYELVYDKIPSTLITDSSIAYRIRTS--------PIPIKAAFVGADRIVRN---GDTA-----NKIGTLQLAVICKQFG 85 (191)
T ss_dssp HHHHHHHHTCCBEEBCGGGHHHHHHHC--------SSCEEEEEECCSEECTT---SCEE-----EETTHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEEechHHHHHHHhC--------CCCCCEEEECccEEecC---CCEE-----ecccHHHHHHHHHHcC
Confidence 599999999999999764444444432 00277776641 11111 0111 1112234556788999
Q ss_pred CCeEEEccc
Q 012217 109 LPIVLFFTI 117 (468)
Q Consensus 109 IP~v~~~~~ 117 (468)
||+++..+.
T Consensus 86 vPf~V~a~~ 94 (191)
T 1w2w_B 86 IKFFVVAPK 94 (191)
T ss_dssp CEEEEECCG
T ss_pred CCEEEeccc
Confidence 999998654
No 105
>3mc3_A DSRE/DSRF-like family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MLY MSE; 1.49A {Sulfolobus solfataricus}
Probab=34.08 E-value=60 Score=25.76 Aligned_cols=29 Identities=10% Similarity=-0.040 Sum_probs=24.6
Q ss_pred CCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 20 FQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 20 ~~GHi~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
+......-+.+|...++.||+|+++-+..
T Consensus 28 ~~~~~~~al~lA~~A~a~g~eV~vFf~~d 56 (134)
T 3mc3_A 28 DLDRTYAPLFMASISASMEYETSVFFMIX 56 (134)
T ss_dssp GTHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred CHHHHHHHHHHHHHHHHCCCCEEEEEEeC
Confidence 56788889999999999999999887643
No 106
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=33.80 E-value=25 Score=33.94 Aligned_cols=36 Identities=8% Similarity=0.121 Sum_probs=25.0
Q ss_pred CcEEEEEc---CCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012217 10 KVHAVCIP---SPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 10 ~~~il~~p---~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~ 47 (468)
+|+|++++ +| .+.-.-...+++.|+++| +|++++..
T Consensus 14 ~MkIl~is~~~~p-~~~~~~~~~l~~~l~~~G-~V~vi~~~ 52 (406)
T 2hy7_A 14 RPCYLVLSSHDFR-TPRRANIHFITDQLALRG-TTRFFSLR 52 (406)
T ss_dssp CSCEEEEESSCTT-SSSCCHHHHHHHHHHHHS-CEEEEECS
T ss_pred CceEEEEecccCC-ChhhhhHhHHHHHHHhCC-ceEEEEec
Confidence 58999988 44 222112345788999999 99999554
No 107
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=33.25 E-value=46 Score=31.18 Aligned_cols=38 Identities=13% Similarity=0.023 Sum_probs=27.2
Q ss_pred cEEEEEcCCCCccHHHHHHHHHHHHhC-CCEEEEEeCCcc
Q 012217 11 VHAVCIPSPFQSHIKAMLKLAKLLHHK-GFHITFVNTEFN 49 (468)
Q Consensus 11 ~~il~~p~p~~GHi~P~l~La~~L~~r-Gh~Vt~~t~~~~ 49 (468)
++|+++... .+....+..|++.|.++ ||+|.++++...
T Consensus 6 mkIl~v~~~-~~~~~~~~~l~~~L~~~~g~~v~~~~~~~~ 44 (376)
T 1v4v_A 6 KRVVLAFGT-RPEATKMAPVYLALRGIPGLKPLVLLTGQH 44 (376)
T ss_dssp EEEEEEECS-HHHHHHHHHHHHHHHTSTTEEEEEEECSSC
T ss_pred eEEEEEEec-cHHHHHHHHHHHHHHhCCCCceEEEEcCCc
Confidence 689888743 33445567789999998 899887766443
No 108
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=32.45 E-value=2.3e+02 Score=25.88 Aligned_cols=103 Identities=12% Similarity=0.099 Sum_probs=65.4
Q ss_pred HHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHHHhcCC
Q 012217 287 LIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGV 366 (468)
Q Consensus 287 ~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~Gv 366 (468)
-.++++.|++.+..+++..+.. ..+|+.+.+..+.++.=+ ||+. .=...|++....|+.+|+
T Consensus 155 ~~~~~~~l~~~~~Dlivlagy~------~il~~~~l~~~~~~~iNi----------HpSl--LP~~rG~~p~~~A~~~G~ 216 (288)
T 3obi_A 155 EAAITALIAQTHTDLVVLARYM------QILSDEMSARLAGRCINI----------HHSF--LPGFKGAKPYHQAFDRGV 216 (288)
T ss_dssp HHHHHHHHHHHTCCEEEESSCC------SCCCHHHHHHTTTSEEEE----------EEEC--SSCCCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHhcCCCEEEhhhhh------hhCCHHHHhhhcCCeEEe----------Cccc--ccCCCCchHHHHHHHcCC
Confidence 3457788888888888887754 458888877655432211 2221 222458999999999999
Q ss_pred cEEecCCCC--CcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHH
Q 012217 367 PMICWPFTG--DQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREM 413 (468)
Q Consensus 367 P~v~~P~~~--DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~ 413 (468)
...++=.+. +..+-+..+.++ -+.+. ..-|.++|.+.+.++
T Consensus 217 ~~~G~Tvh~v~~~~D~GpIi~Q~---~v~i~---~~dt~~~L~~r~~~~ 259 (288)
T 3obi_A 217 KLIGATAHYVTSALDEGPIIDQD---VERIS---HRDTPADLVRKGRDI 259 (288)
T ss_dssp SEEEEEEEECCSSTTCSCEEEEE---EEECC---TTCCHHHHHHHHHHH
T ss_pred CEEEEEEEEECCCCcCCCeEEEE---EEecC---CCCCHHHHHHHHHHH
Confidence 988776633 444455444222 34444 456788888777655
No 109
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=32.12 E-value=47 Score=30.84 Aligned_cols=42 Identities=5% Similarity=0.085 Sum_probs=30.4
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhh
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKA 56 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~ 56 (468)
+++|+++-.++.| ..+|..|++.||+|+++..+...+.+.+.
T Consensus 19 ~~kI~IiGaGa~G-----~~~a~~L~~~G~~V~l~~~~~~~~~i~~~ 60 (318)
T 3hwr_A 19 GMKVAIMGAGAVG-----CYYGGMLARAGHEVILIARPQHVQAIEAT 60 (318)
T ss_dssp -CEEEEESCSHHH-----HHHHHHHHHTTCEEEEECCHHHHHHHHHH
T ss_pred CCcEEEECcCHHH-----HHHHHHHHHCCCeEEEEEcHhHHHHHHhC
Confidence 5799999888887 45788899999999999333344444443
No 110
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=32.09 E-value=28 Score=34.84 Aligned_cols=34 Identities=12% Similarity=0.320 Sum_probs=28.4
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
|+|||++=.+.-| +.+|+.|.++|++||++....
T Consensus 42 KprVVIIGgG~AG-----l~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 42 KPNVLILGSGWGA-----ISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SCEEEEECSSHHH-----HHHHHHSCTTTCEEEEEESSS
T ss_pred CCCEEEECCcHHH-----HHHHHHhhhCCCcEEEECCCC
Confidence 7899999866555 578999999999999998754
No 111
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=32.01 E-value=2.6e+02 Score=25.71 Aligned_cols=106 Identities=12% Similarity=0.120 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHHHh
Q 012217 284 KQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLC 363 (468)
Q Consensus 284 ~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~ 363 (468)
.+.-.++++.|++.+..+++..+.. ..+|+.+.+..+.++.=+ ||+. .=...|++....|+.
T Consensus 167 ~~~~~~~~~~l~~~~~DliVlagym------~IL~~~~l~~~~~~~INi----------HpSl--LP~frG~~p~~~Ai~ 228 (302)
T 3o1l_A 167 EPAFAEVSRLVGHHQADVVVLARYM------QILPPQLCREYAHQVINI----------HHSF--LPSFVGAKPYHQASL 228 (302)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESSCC------SCCCTTHHHHTTTCEEEE----------ESSC--TTSSCSSCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEHhHhh------hhcCHHHHhhhhCCeEEe----------Cccc--ccCCCCccHHHHHHH
Confidence 3344567788888888888887754 457788776655432211 2222 223468999999999
Q ss_pred cCCcEEecCCCC--CcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHH
Q 012217 364 SGVPMICWPFTG--DQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREM 413 (468)
Q Consensus 364 ~GvP~v~~P~~~--DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~ 413 (468)
+|+...++=.+. +..+-+..+.++ -+.+. ..-|.++|.+.+.++
T Consensus 229 ~G~k~tG~TvH~v~~~lD~GpII~Q~---~v~I~---~~dt~~~L~~r~~~~ 274 (302)
T 3o1l_A 229 RGVKLIGATCHYVTEELDAGPIIEQD---VVRVS---HRDSIENMVRFGRDV 274 (302)
T ss_dssp HTCSEEEEEEEECCSSTTCSCEEEEE---EEECC---TTCCHHHHHHHHHHH
T ss_pred cCCCeEEEEEEEECCCCcCCCeEEEE---EEecC---CCCCHHHHHHHHHHH
Confidence 999988876633 444444444222 34444 456888888777654
No 112
>2yvk_A Methylthioribose-1-phosphate isomerase; methionine salvage pathway,; HET: MRU; 2.40A {Bacillus subtilis} PDB: 2yrf_A*
Probab=31.82 E-value=58 Score=31.19 Aligned_cols=20 Identities=15% Similarity=0.163 Sum_probs=15.2
Q ss_pred hHHHHHHHcCCCeEEEcccc
Q 012217 99 FTITAAQQLGLPIVLFFTIS 118 (468)
Q Consensus 99 ~~~~vA~~lgIP~v~~~~~~ 118 (468)
....+|+.+|||+++..++.
T Consensus 277 ~lAl~Ak~~~vPfyV~ap~~ 296 (374)
T 2yvk_A 277 GLAILANAFDIPFFVAAPLS 296 (374)
T ss_dssp HHHHHHHHTTCCEEEECCGG
T ss_pred HHHHHHHHcCCCEEEecccc
Confidence 44567899999999986543
No 113
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=31.82 E-value=46 Score=30.98 Aligned_cols=48 Identities=15% Similarity=0.021 Sum_probs=29.9
Q ss_pred hhhhhccccCCCCceEEEeecCC---cCCCHHHHHHHHHHHHcCCCCEEEEEcC
Q 012217 257 TECLQWLDCKEPKSVIYVNFGSF---IFMNKQQLIEVAMGLVNSNHPFLWIIRP 307 (468)
Q Consensus 257 ~~~~~wld~~~~~~vv~vs~GS~---~~~~~~~~~~~~~~l~~~~~~~lw~~~~ 307 (468)
+++..+++... ++-|-+|+. ..+..+.+..+.+.+++.+..+++-.+.
T Consensus 127 ~el~~~~~~~g---~~Gv~l~~~~~~~~l~d~~~~~~~~~~~e~~lpv~iH~~~ 177 (336)
T 2wm1_A 127 KEMERCVKELG---FPGVQIGTHVNEWDLNAQELFPVYAAAERLKCSLFVHPWD 177 (336)
T ss_dssp HHHHHHHHTSC---CSEEEEESEETTEETTCGGGHHHHHHHHHHTCEEEEECCS
T ss_pred HHHHHHHHccC---CeEEEECCcCCCCCCCCccHHHHHHHHHHcCCEEEECCCC
Confidence 45666665432 333434443 2344567888999999889888776653
No 114
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=31.70 E-value=32 Score=27.44 Aligned_cols=34 Identities=15% Similarity=0.047 Sum_probs=27.5
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
+.||+++-++..| ..+|+.|.++||+|+++....
T Consensus 7 ~~~viIiG~G~~G-----~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVG-----SLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHH-----HHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHH-----HHHHHHHHHCCCCEEEEECCH
Confidence 5699999776555 478999999999999997643
No 115
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=31.46 E-value=35 Score=27.46 Aligned_cols=36 Identities=17% Similarity=0.099 Sum_probs=28.8
Q ss_pred cEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012217 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFN 49 (468)
Q Consensus 11 ~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~ 49 (468)
.+++++.-+ .| +.|++.+++.|.++|.+|+++ ....
T Consensus 19 ~~~llIaGG-~G-iaPl~sm~~~l~~~~~~v~l~-g~R~ 54 (142)
T 3lyu_A 19 GKILAIGAY-TG-IVEVYPIAKAWQEIGNDVTTL-HVTF 54 (142)
T ss_dssp SEEEEEEET-TH-HHHHHHHHHHHHHTTCEEEEE-EEEE
T ss_pred CeEEEEECc-Cc-HHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 477777744 34 899999999999999999999 6543
No 116
>2a0u_A Initiation factor 2B; SGPP, structural genomics, PSI, protein structure initiative eukaryotic initiation factor; 2.10A {Leishmania major} SCOP: c.124.1.5
Probab=30.97 E-value=61 Score=31.12 Aligned_cols=20 Identities=10% Similarity=0.052 Sum_probs=15.2
Q ss_pred hHHHHHHHcCCCeEEEcccc
Q 012217 99 FTITAAQQLGLPIVLFFTIS 118 (468)
Q Consensus 99 ~~~~vA~~lgIP~v~~~~~~ 118 (468)
....+|+.+|||+++..++.
T Consensus 281 ~lAl~Ak~~~vPfyV~ap~~ 300 (383)
T 2a0u_A 281 NLAVSAKFHGVKLYVAAPTT 300 (383)
T ss_dssp HHHHHHHHTTCCEEEECCGG
T ss_pred HHHHHHHHcCCCEEEeCCcc
Confidence 44567899999999986643
No 117
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=30.61 E-value=1e+02 Score=28.51 Aligned_cols=47 Identities=13% Similarity=0.092 Sum_probs=30.1
Q ss_pred hhhhhccccCCCCceEEEeecCC---cCCCHHHHHHHHHHHHcCCCCEEEEEcC
Q 012217 257 TECLQWLDCKEPKSVIYVNFGSF---IFMNKQQLIEVAMGLVNSNHPFLWIIRP 307 (468)
Q Consensus 257 ~~~~~wld~~~~~~vv~vs~GS~---~~~~~~~~~~~~~~l~~~~~~~lw~~~~ 307 (468)
+++..+++.+ -+++ -+|+. ..+..+.+..+.+.+++.+..+++-.+.
T Consensus 131 ~el~~~~~~g-~~Gv---~l~~~~~~~~l~d~~~~p~~~~~~e~~lpv~iH~~~ 180 (334)
T 2hbv_A 131 KEASRAVAAG-HLGI---QIGNHLGDKDLDDATLEAFLTHCANEDIPILVHPWD 180 (334)
T ss_dssp HHHHHHHHHT-CCCE---EEESCBTTBCTTSHHHHHHHHHHHHTTCCEEEECCS
T ss_pred HHHHHHHHcC-CeEE---EECCCCCCCCCCcHHHHHHHHHHHHCCCEEEECCCC
Confidence 4566666322 2333 33333 2445678999999999999998877654
No 118
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=30.60 E-value=71 Score=29.42 Aligned_cols=41 Identities=10% Similarity=0.079 Sum_probs=30.5
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhh
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKA 56 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~ 56 (468)
.++|+++-.++.|- .+|..|++.||+|+++.... .+.+.+.
T Consensus 2 ~mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~~~ 42 (312)
T 3hn2_A 2 SLRIAIVGAGALGL-----YYGALLQRSGEDVHFLLRRD-YEAIAGN 42 (312)
T ss_dssp --CEEEECCSTTHH-----HHHHHHHHTSCCEEEECSTT-HHHHHHT
T ss_pred CCEEEEECcCHHHH-----HHHHHHHHCCCeEEEEEcCc-HHHHHhC
Confidence 35899998888884 46888999999999998754 3555443
No 119
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=30.37 E-value=65 Score=29.80 Aligned_cols=41 Identities=12% Similarity=0.113 Sum_probs=30.8
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHhh
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLKA 56 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~~ 56 (468)
+++|+++-.++.|- .+|..|++.||+|+++.... .+.+.+.
T Consensus 2 ~mkI~IiGaGaiG~-----~~a~~L~~~g~~V~~~~r~~-~~~i~~~ 42 (320)
T 3i83_A 2 SLNILVIGTGAIGS-----FYGALLAKTGHCVSVVSRSD-YETVKAK 42 (320)
T ss_dssp -CEEEEESCCHHHH-----HHHHHHHHTTCEEEEECSTT-HHHHHHH
T ss_pred CCEEEEECcCHHHH-----HHHHHHHhCCCeEEEEeCCh-HHHHHhC
Confidence 46899998777774 57888999999999998755 3555554
No 120
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=30.05 E-value=1.1e+02 Score=30.49 Aligned_cols=66 Identities=14% Similarity=0.168 Sum_probs=39.0
Q ss_pred cCCCcceeeeccCh------hhHHHHHhcCCcEEec-------------CCC-CCcccchhhheeeceeEEEEeCCCCCc
Q 012217 342 KHPSIGGFLTHCGW------NSIVESLCSGVPMICW-------------PFT-GDQPTNGRYVCNEWGVGMEINGDDEDV 401 (468)
Q Consensus 342 ~~~~~~~~v~hgG~------~s~~eal~~GvP~v~~-------------P~~-~DQ~~na~~~~~~~g~g~~~~~~~~~~ 401 (468)
..+.+ +++|.|- +.++||-+.++|+|++ .+. .||..-.+-+++ -...+.. ..-
T Consensus 62 g~~~v--~~~tsGpG~~N~~~~l~~A~~~~~Pll~itg~~~~~~~~~~~~q~~~d~~~~~~~~~k---~~~~v~~--~~~ 134 (528)
T 1q6z_A 62 RKPAF--INLHSAAGTGNAMGALSNAWNSHSPLIVTAGQQTRAMIGVEALLTNVDAANLPRPLVK---WSYEPAS--AAE 134 (528)
T ss_dssp TSCEE--EEEEHHHHHHHTHHHHHHHHHTTCCEEEEEEECCHHHHTTTCTTCCTTGGGSSTTSCS---CEECCSS--GGG
T ss_pred CCCEE--EEEcCChHHHHHHHHHHHHhhcCCCEEEEeCCCcccccCCCcccccccHHHHHHHhhH---hhhcCCC--HHH
Confidence 34555 7788774 4688999999999999 333 366555544432 1333331 112
Q ss_pred chhHHHHHHHHHh
Q 012217 402 IRNEVEKLVREMM 414 (468)
Q Consensus 402 ~~~~l~~av~~~l 414 (468)
-.+.+.+|++..+
T Consensus 135 ~~~~i~~A~~~a~ 147 (528)
T 1q6z_A 135 VPHAMSRAIHMAS 147 (528)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 3456666666554
No 121
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=29.87 E-value=47 Score=31.59 Aligned_cols=37 Identities=5% Similarity=0.052 Sum_probs=28.0
Q ss_pred cEEEEEc--CC-CCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 11 VHAVCIP--SP-FQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 11 ~~il~~p--~p-~~GHi~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
|+|+++. +| ..|--.-...|++.|+++ |+|++++...
T Consensus 1 MkI~~v~~~~p~~gG~~~~~~~l~~~L~~~-~~V~v~~~~~ 40 (413)
T 3oy2_A 1 MKLIIVGAHSSVPSGYGRVMRAIVPRISKA-HEVIVFGIHA 40 (413)
T ss_dssp CEEEEEEECTTCCSHHHHHHHHHHHHHTTT-SEEEEEEESC
T ss_pred CeEEEecCCCCCCCCHHHHHHHHHHHHHhc-CCeEEEeecC
Confidence 4777774 23 345566778999999999 9999998644
No 122
>1t9k_A Probable methylthioribose-1-phosphate isomerase; structural genomics, translation initiation factor, AIF-2B subunit, PSI; 2.60A {Thermotoga maritima} SCOP: c.124.1.5
Probab=29.52 E-value=62 Score=30.63 Aligned_cols=20 Identities=15% Similarity=0.162 Sum_probs=15.1
Q ss_pred hHHHHHHHcCCCeEEEcccc
Q 012217 99 FTITAAQQLGLPIVLFFTIS 118 (468)
Q Consensus 99 ~~~~vA~~lgIP~v~~~~~~ 118 (468)
....+|+.+|||+++..++.
T Consensus 252 ~lAl~Ak~~~vPfyV~ap~~ 271 (347)
T 1t9k_A 252 SLAVLAKRNNIPFYVAAPVS 271 (347)
T ss_dssp HHHHHHHHTTCCEEEECCGG
T ss_pred HHHHHHHHcCCCEEEecccc
Confidence 44567899999999986543
No 123
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=29.31 E-value=33 Score=32.58 Aligned_cols=29 Identities=24% Similarity=0.273 Sum_probs=24.4
Q ss_pred cEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEE
Q 012217 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFV 44 (468)
Q Consensus 11 ~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~ 44 (468)
|||+++=-+-.| +.+|..|+++|++|+++
T Consensus 2 m~V~IVGaGpaG-----l~~A~~L~~~G~~v~v~ 30 (412)
T 4hb9_A 2 MHVGIIGAGIGG-----TCLAHGLRKHGIKVTIY 30 (412)
T ss_dssp CEEEEECCSHHH-----HHHHHHHHHTTCEEEEE
T ss_pred CEEEEECcCHHH-----HHHHHHHHhCCCCEEEE
Confidence 588888766555 78888999999999998
No 124
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=29.01 E-value=40 Score=30.89 Aligned_cols=32 Identities=13% Similarity=0.058 Sum_probs=23.6
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012217 12 HAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (468)
Q Consensus 12 ~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~ 46 (468)
+.++++ ++.|-+- ..|+++|+++||+|+.+.-
T Consensus 13 ~~vlVT-GatG~iG--~~l~~~L~~~G~~V~~~~r 44 (321)
T 2pk3_A 13 MRALIT-GVAGFVG--KYLANHLTEQNVEVFGTSR 44 (321)
T ss_dssp CEEEEE-TTTSHHH--HHHHHHHHHTTCEEEEEES
T ss_pred ceEEEE-CCCChHH--HHHHHHHHHCCCEEEEEec
Confidence 344444 6777663 6788999999999998864
No 125
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=28.74 E-value=1e+02 Score=32.29 Aligned_cols=112 Identities=13% Similarity=0.036 Sum_probs=72.6
Q ss_pred cccChHHhhcCCCcceeeeccChhhHHHHHhcCCcEEecCCCCCcccch-hhhe---eeceeEEEEeCCCCCcchhHHHH
Q 012217 333 SWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVPMICWPFTGDQPTNG-RYVC---NEWGVGMEINGDDEDVIRNEVEK 408 (468)
Q Consensus 333 ~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP~v~~P~~~DQ~~na-~~~~---~~~g~g~~~~~~~~~~~~~~l~~ 408 (468)
++.+-.++|..+++ .||=- .+.+.|.+..++|+|....-.|++.+- +-+- ++.--|.. .-+.++|.+
T Consensus 605 ~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~~rg~y~d~~~~~pg~~------~~~~~eL~~ 675 (729)
T 3l7i_A 605 NYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDKGLRGFYMNYMEDLPGPI------YTEPYGLAK 675 (729)
T ss_dssp TCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTSSCCSBSSCTTSSSSSCE------ESSHHHHHH
T ss_pred CCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhhccCCcccChhHhCCCCe------ECCHHHHHH
Confidence 35666788988888 99974 467789999999999998877776542 1110 01111222 246788888
Q ss_pred HHHHHhcCchHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHh
Q 012217 409 LVREMMEGEKGKQMRNKAMEWKGLAEEAAAPHGSSSLNLDKLVNEILL 456 (468)
Q Consensus 409 av~~~l~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~~~~~~~ 456 (468)
+|.....+. ..|+++.++..+++-. ..+|.++++.++.+++....
T Consensus 676 ~i~~~~~~~--~~~~~~~~~~~~~~~~-~~dg~as~ri~~~i~~~~~~ 720 (729)
T 3l7i_A 676 ELKNLDKVQ--QQYQEKIDAFYDRFCS-VDNGKASQYIGDLIHKDIKE 720 (729)
T ss_dssp HHTTHHHHH--HHTHHHHHHHHHHHST-TCCSCHHHHHHHHHHHHHHH
T ss_pred HHhhhhccc--hhHHHHHHHHHHHhCC-ccCChHHHHHHHHHHhcCcC
Confidence 888776421 2677777777777654 34566666666666665543
No 126
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=28.53 E-value=40 Score=29.93 Aligned_cols=26 Identities=15% Similarity=0.379 Sum_probs=21.2
Q ss_pred CccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 21 QSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 21 ~GHi~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
.|.+- ..+|++|+++|++|++++.+.
T Consensus 28 SG~mG--~aiA~~~~~~Ga~V~lv~~~~ 53 (232)
T 2gk4_A 28 TGHLG--KIITETLLSAGYEVCLITTKR 53 (232)
T ss_dssp CCHHH--HHHHHHHHHTTCEEEEEECTT
T ss_pred CCHHH--HHHHHHHHHCCCEEEEEeCCc
Confidence 66553 568999999999999998754
No 127
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=28.47 E-value=3.1e+02 Score=24.87 Aligned_cols=102 Identities=12% Similarity=0.085 Sum_probs=63.2
Q ss_pred HHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHHHhcCCc
Q 012217 288 IEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVP 367 (468)
Q Consensus 288 ~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP 367 (468)
.++++.|++.+..+++..+.. ..+|+.+.+..+.++.=+ ||+. .=...|++....|+.+|+.
T Consensus 156 ~~~~~~l~~~~~Dlivla~y~------~il~~~~l~~~~~~~iNi----------HpSl--LP~~rG~~p~~~Ai~~G~~ 217 (286)
T 3n0v_A 156 RKVLQVIEETGAELVILARYM------QVLSPELCRRLDGWAINI----------HHSL--LPGFKGAKPYHQAYNKGVK 217 (286)
T ss_dssp HHHHHHHHHHTCSEEEESSCC------SCCCHHHHHHTTTSEEEE----------EECS--STTCCCSCHHHHHHHHTCS
T ss_pred HHHHHHHHhcCCCEEEecccc------cccCHHHHhhhcCCeEEe----------cccc--ccCCCCccHHHHHHHcCCC
Confidence 457777777778888777754 457788776654332211 2221 1224588999999999999
Q ss_pred EEecCCCC--CcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHH
Q 012217 368 MICWPFTG--DQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREM 413 (468)
Q Consensus 368 ~v~~P~~~--DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~ 413 (468)
..++=.+. +..+-+..+.++ -+.+. ..-|.++|.+.+.++
T Consensus 218 ~~G~Tvh~v~~~lD~GpIi~Q~---~~~i~---~~dt~~~L~~r~~~~ 259 (286)
T 3n0v_A 218 MVGATAHYINNDLDEGPIIAQG---VEVVD---HSHYPEDLIAKGRDI 259 (286)
T ss_dssp EEEEEEEECCSSTTCSCEEEEE---EEECC---TTCCHHHHHHHHHHH
T ss_pred eEEEEEEEEcCCCCCCceeEEE---EEEcC---CCCCHHHHHHHHHHH
Confidence 88876633 334444444222 34444 456788888777654
No 128
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=28.17 E-value=54 Score=30.73 Aligned_cols=35 Identities=14% Similarity=0.134 Sum_probs=27.0
Q ss_pred cEEEEEcCCCCccHHHHHHHHHHHHhCCC-EEEEEeC
Q 012217 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGF-HITFVNT 46 (468)
Q Consensus 11 ~~il~~p~p~~GHi~P~l~La~~L~~rGh-~Vt~~t~ 46 (468)
|+|++++ +..++...+..|+++|.++|+ ++.++.+
T Consensus 1 mkIl~v~-~~~~~~~~~~~l~~~L~~~g~~~~~v~~~ 36 (384)
T 1vgv_A 1 MKVLTVF-GTRPEAIKMAPLVHALAKDPFFEAKVCVT 36 (384)
T ss_dssp CEEEEEE-CSHHHHHHHHHHHHHHHHSTTCEEEEEEC
T ss_pred CeEEEEe-cccHHHHHHHHHHHHHHhCCCCceEEEEc
Confidence 4788775 456778888999999999994 8876544
No 129
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=28.15 E-value=1.9e+02 Score=26.14 Aligned_cols=66 Identities=11% Similarity=0.167 Sum_probs=40.6
Q ss_pred CCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHh-hcCCCcceeeeccChhhHHH
Q 012217 282 MNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEV-LKHPSIGGFLTHCGWNSIVE 360 (468)
Q Consensus 282 ~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~i-l~~~~~~~~v~hgG~~s~~e 360 (468)
...+.+..+++.+++.|.+++.-.+..... ...+ .+. ..-..+ -.+|+++.+|.|||+....+
T Consensus 135 ~~d~~~~~~~~~a~e~glpv~iH~~~~~~~------~~~~-----~~p-----~~~~~v~~~~P~l~ivl~H~G~~~~~~ 198 (291)
T 3irs_A 135 VDDRRLYPLYAFCEDNGIPVIMMTGGNAGP------DITY-----TNP-----EHIDRVLGDFPDLTVVSSHGNWPWVQE 198 (291)
T ss_dssp TTCGGGHHHHHHHHHTTCCEEEECSSSCSS------SGGG-----GCH-----HHHHHHHHHCTTCCEEEEGGGTTCHHH
T ss_pred CCCHHHHHHHHHHHHcCCeEEEeCCCCCCC------CCcc-----CCH-----HHHHHHHHHCCCCEEEeecCCcccHHH
Confidence 345678889999999999988776642100 0000 000 001223 34788888999999887777
Q ss_pred HHh
Q 012217 361 SLC 363 (468)
Q Consensus 361 al~ 363 (468)
++.
T Consensus 199 ~~~ 201 (291)
T 3irs_A 199 IIH 201 (291)
T ss_dssp HHH
T ss_pred HHH
Confidence 665
No 130
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=27.96 E-value=58 Score=27.13 Aligned_cols=36 Identities=14% Similarity=0.386 Sum_probs=28.3
Q ss_pred EEEEEcCCCCc-----cHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012217 12 HAVCIPSPFQS-----HIKAMLKLAKLLHHKGFHITFVNTEFN 49 (468)
Q Consensus 12 ~il~~p~p~~G-----Hi~P~l~La~~L~~rGh~Vt~~t~~~~ 49 (468)
.|+++|- .| =.++.-+|++.|.++|.+|.|..+|-.
T Consensus 25 ~ViIvPG--YGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPVA 65 (180)
T 1pno_A 25 KVIIVPG--YGMAVAQAQHALREMADVLKKEGVEVSYAIHPVA 65 (180)
T ss_dssp EEEEEEC--HHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTTC
T ss_pred eEEEECC--hHHHHHHHHHHHHHHHHHHHHCCCeEEEEecccc
Confidence 6777763 22 246899999999999999999998743
No 131
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=27.82 E-value=50 Score=30.84 Aligned_cols=41 Identities=12% Similarity=0.004 Sum_probs=29.9
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcchHHHHh
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNHRRLLK 55 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~~~~~~ 55 (468)
.++|+++-.++.|- .+|..|++.||+|+++......+.+.+
T Consensus 3 ~mkI~IiGaG~~G~-----~~a~~L~~~g~~V~~~~r~~~~~~~~~ 43 (335)
T 3ghy_A 3 LTRICIVGAGAVGG-----YLGARLALAGEAINVLARGATLQALQT 43 (335)
T ss_dssp CCCEEEESCCHHHH-----HHHHHHHHTTCCEEEECCHHHHHHHHH
T ss_pred CCEEEEECcCHHHH-----HHHHHHHHCCCEEEEEEChHHHHHHHH
Confidence 45899998777774 568899999999999986433333433
No 132
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=27.70 E-value=77 Score=29.27 Aligned_cols=32 Identities=9% Similarity=0.121 Sum_probs=23.9
Q ss_pred hhcCCCcceeeeccChhhHHHHHhc----CCcEEecCC
Q 012217 340 VLKHPSIGGFLTHCGWNSIVESLCS----GVPMICWPF 373 (468)
Q Consensus 340 il~~~~~~~~v~hgG~~s~~eal~~----GvP~v~~P~ 373 (468)
+...+++ +|.-||-||+.+++.. ++|+++++.
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 3445666 9999999999999854 899998864
No 133
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=27.48 E-value=44 Score=29.22 Aligned_cols=38 Identities=11% Similarity=-0.042 Sum_probs=32.6
Q ss_pred cEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 11 ~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
|+|++..-++.|-..-...||..|+++|++|.++-...
T Consensus 1 mkI~vs~kGGvGKTt~a~~LA~~la~~g~~VlliD~D~ 38 (254)
T 3kjh_A 1 MKLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDP 38 (254)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHHHTTTCSCEEEEEECT
T ss_pred CEEEEecCCCCCHHHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 36778777899999999999999999999999996543
No 134
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=27.26 E-value=60 Score=27.13 Aligned_cols=37 Identities=16% Similarity=0.222 Sum_probs=27.9
Q ss_pred EEEEEcCC--C-CccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 12 HAVCIPSP--F-QSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 12 ~il~~p~p--~-~GHi~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
.|+++|-= + .--.++.-+|++.|.++|.+|.|..+|-
T Consensus 24 ~ViIvPGYGmAvAqAQ~~v~el~~~L~~~G~~V~faIHPV 63 (184)
T 1d4o_A 24 SIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPV 63 (184)
T ss_dssp EEEEEECHHHHHTTTHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred eEEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 67777631 1 1124689999999999999999999874
No 135
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=27.13 E-value=2.7e+02 Score=23.15 Aligned_cols=145 Identities=12% Similarity=0.063 Sum_probs=77.9
Q ss_pred CceEEEeecCCcCCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcce
Q 012217 269 KSVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGG 348 (468)
Q Consensus 269 ~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~ 348 (468)
+|.|-|-+||... -+..++....|+..|.++=..+-+- ...|+.+.+-... .. -...+|
T Consensus 11 ~~~V~IimGS~SD--~~v~~~a~~~L~~~Gi~~dv~V~Sa------HR~p~~l~~~~~~----------a~-~~g~~V-- 69 (170)
T 1xmp_A 11 KSLVGVIMGSTSD--WETMKYACDILDELNIPYEKKVVSA------HRTPDYMFEYAET----------AR-ERGLKV-- 69 (170)
T ss_dssp CCSEEEEESSGGG--HHHHHHHHHHHHHTTCCEEEEECCT------TTSHHHHHHHHHH----------TT-TTTCCE--
T ss_pred CCcEEEEECcHHH--HHHHHHHHHHHHHcCCCEEEEEEec------cCCHHHHHHHHHH----------HH-hCCCcE--
Confidence 3578888888874 4456677778888888865444332 3344443221110 00 011233
Q ss_pred eeeccChh----hHHHHHhcCCcEEecCCCCC--cccchhh-hee-eceeEEEEeCCC--CCcchhHHHHHHHHHhcCch
Q 012217 349 FLTHCGWN----SIVESLCSGVPMICWPFTGD--QPTNGRY-VCN-EWGVGMEINGDD--EDVIRNEVEKLVREMMEGEK 418 (468)
Q Consensus 349 ~v~hgG~~----s~~eal~~GvP~v~~P~~~D--Q~~na~~-~~~-~~g~g~~~~~~~--~~~~~~~l~~av~~~l~~~~ 418 (468)
||.=.|.. ++..++ .-+|+|.+|.... +...+-. +++ --|+.+..-.-+ +..++..++..|- -+.|+
T Consensus 70 iIa~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlSivqmP~GvpVatV~I~~a~~~nAallAaqIl-a~~d~- 146 (170)
T 1xmp_A 70 IIAGAGGAAHLPGMVAAK-TNLPVIGVPVQSKALNGLDSLLSIVQMPGGVPVATVAIGKAGSTNAGLLAAQIL-GSFHD- 146 (170)
T ss_dssp EEEEEESSCCHHHHHHTT-CCSCEEEEEECCTTTTTHHHHHHHHCCCTTCCCEECCSSHHHHHHHHHHHHHHH-HTTCH-
T ss_pred EEEECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCcHHHHHHHhcCCCCCeeEEEecCCcchHHHHHHHHHHH-ccCCH-
Confidence 77766643 333333 4689999999543 1222211 112 124542221101 2345566665554 34577
Q ss_pred HHHHHHHHHHHHHHHHHHhCC
Q 012217 419 GKQMRNKAMEWKGLAEEAAAP 439 (468)
Q Consensus 419 ~~~~~~~a~~l~~~~~~a~~~ 439 (468)
+++++.+..+++.++.+.+
T Consensus 147 --~l~~kl~~~r~~~~~~v~~ 165 (170)
T 1xmp_A 147 --DIHDALELRREAIEKDVRE 165 (170)
T ss_dssp --HHHHHHHHHHHHHHHHHHC
T ss_pred --HHHHHHHHHHHHHHHHHHh
Confidence 7899999888888775433
No 136
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=26.79 E-value=1.1e+02 Score=28.89 Aligned_cols=36 Identities=14% Similarity=0.267 Sum_probs=24.8
Q ss_pred ceEEEeecCCcCCCHHHHHHHHHHHHcCCCCEEEEEcC
Q 012217 270 SVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRP 307 (468)
Q Consensus 270 ~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~ 307 (468)
.+++++.|+..... ....++++|.+.|..+.+....
T Consensus 22 rIl~~~~~~~Gh~~--~~~~la~~L~~~GheV~v~~~~ 57 (412)
T 3otg_A 22 RVLFASLGTHGHTY--PLLPLATAARAAGHEVTFATGE 57 (412)
T ss_dssp EEEEECCSSHHHHG--GGHHHHHHHHHTTCEEEEEECG
T ss_pred EEEEEcCCCcccHH--HHHHHHHHHHHCCCEEEEEccH
Confidence 37788866543211 2457889999999998888764
No 137
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=26.25 E-value=41 Score=30.90 Aligned_cols=32 Identities=6% Similarity=0.158 Sum_probs=26.2
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhC-----C-CEEEEEeC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHK-----G-FHITFVNT 46 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~r-----G-h~Vt~~t~ 46 (468)
+++|.++-.+..|. .+|..|++. | |+|+++..
T Consensus 8 ~m~I~iiG~G~mG~-----~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 8 PIKIAVFGLGGVGG-----YYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp CEEEEEECCSHHHH-----HHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CCEEEEECcCHHHH-----HHHHHHHhCccccCCCCCEEEEEc
Confidence 46999998777774 568889888 9 99999976
No 138
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=26.15 E-value=1.1e+02 Score=28.67 Aligned_cols=31 Identities=19% Similarity=0.320 Sum_probs=23.1
Q ss_pred CCCcceeeec-cChhhHHHHHhcCCcEEecCCCC
Q 012217 343 HPSIGGFLTH-CGWNSIVESLCSGVPMICWPFTG 375 (468)
Q Consensus 343 ~~~~~~~v~h-gG~~s~~eal~~GvP~v~~P~~~ 375 (468)
.|++ +|++ .++.....|-..|+|.+.+-...
T Consensus 114 ~PD~--Vv~~~~~~~~~~aa~~~giP~v~~~~~~ 145 (391)
T 3tsa_A 114 RPSV--LLVDVCALIGRVLGGLLDLPVVLHRWGV 145 (391)
T ss_dssp CCSE--EEEETTCHHHHHHHHHTTCCEEEECCSC
T ss_pred CCCE--EEeCcchhHHHHHHHHhCCCEEEEecCC
Confidence 6887 6666 66667777889999999885433
No 139
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=25.78 E-value=90 Score=29.80 Aligned_cols=74 Identities=9% Similarity=0.103 Sum_probs=47.8
Q ss_pred CCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHH
Q 012217 281 FMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVE 360 (468)
Q Consensus 281 ~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~e 360 (468)
..+.+...++.+++.+...+.||.++++. +-.++.++++...|-.+|.. ||-..-...+.-
T Consensus 92 gtd~~Ra~dL~~af~Dp~i~aI~~~rGGy-----------------ga~rlLp~LD~~~i~~~PK~--fiGySDiTaL~~ 152 (371)
T 3tla_A 92 GTIKERAQEFNELVYNPDITCIMSTIGGD-----------------NSNSLLPFLDYDAIIANPKI--IIGYSDTTALLA 152 (371)
T ss_dssp SCHHHHHHHHHHHHTCTTEEEEEESCCCS-----------------CGGGGGGGSCHHHHHHSCCE--EEECGGGHHHHH
T ss_pred CCHHHHHHHHHHHhhCCCCCEEEEccccc-----------------cHHHHHhhcChhhHHhCCcE--EEEechHHHHHH
Confidence 33457788899999988899999988662 12244555555555556655 666666665555
Q ss_pred HHh--cCCcEEecCC
Q 012217 361 SLC--SGVPMICWPF 373 (468)
Q Consensus 361 al~--~GvP~v~~P~ 373 (468)
|++ +|++.+-=|+
T Consensus 153 ai~~k~Gl~T~hGP~ 167 (371)
T 3tla_A 153 GIYAKTGLITFYGPA 167 (371)
T ss_dssp HHHHHHCBCEEECCC
T ss_pred HHHHHcCCEEEECcc
Confidence 554 4666655554
No 140
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=25.71 E-value=4.7e+02 Score=25.41 Aligned_cols=153 Identities=8% Similarity=0.014 Sum_probs=76.8
Q ss_pred ccccCCCCceEEEeecCCcCCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhh-cCceEecccChHHh
Q 012217 262 WLDCKEPKSVIYVNFGSFIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAK-EKGFVASWCPQEEV 340 (468)
Q Consensus 262 wld~~~~~~vv~vs~GS~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~p~~~i 340 (468)
|++-. .+.++.|..|... ...++.|.+.|..+.++-.. +.+.+.+... .++.+..-.-+...
T Consensus 7 ~~~l~-~~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~---------~~~~~~~l~~~~~i~~~~~~~~~~~ 69 (457)
T 1pjq_A 7 FCQLR-DRDCLIVGGGDVA-------ERKARLLLEAGARLTVNALT---------FIPQFTVWANEGMLTLVEGPFDETL 69 (457)
T ss_dssp EECCB-TCEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESS---------CCHHHHHHHTTTSCEEEESSCCGGG
T ss_pred EEECC-CCEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCC---------CCHHHHHHHhcCCEEEEECCCCccc
Confidence 44433 4558888877543 23445566678877665432 2233332211 34444321112233
Q ss_pred hcCCCcceeeeccChhh-----HHHHHhcCCcEEec--CCCCCcccchhhheeeceeEEEEeCCCCC-cchhHHHHHHHH
Q 012217 341 LKHPSIGGFLTHCGWNS-----IVESLCSGVPMICW--PFTGDQPTNGRYVCNEWGVGMEINGDDED-VIRNEVEKLVRE 412 (468)
Q Consensus 341 l~~~~~~~~v~hgG~~s-----~~eal~~GvP~v~~--P~~~DQ~~na~~~~~~~g~g~~~~~~~~~-~~~~~l~~av~~ 412 (468)
|...++ +|.--|.-. ..+|-..|+|+-++ |-..|...-| .+ ++-++-+.+.+.-.. .-...|++.|.+
T Consensus 70 l~~~~l--Vi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e~~~~~~pa-~~-~~~~l~iaIsT~Gksp~la~~ir~~ie~ 145 (457)
T 1pjq_A 70 LDSCWL--AIAATDDDTVNQRVSDAAESRRIFCNVVDAPKAASFIMPS-II-DRSPLMVAVSSGGTSPVLARLLREKLES 145 (457)
T ss_dssp GTTCSE--EEECCSCHHHHHHHHHHHHHTTCEEEETTCTTSSSEECCE-EE-EETTEEEEEECTTSCHHHHHHHHHHHHH
T ss_pred cCCccE--EEEcCCCHHHHHHHHHHHHHcCCEEEECCCcccCceEeee-EE-EeCCeEEEEECCCCChHHHHHHHHHHHH
Confidence 445555 777667543 34566789997333 3333332222 11 232333334331012 225777777777
Q ss_pred HhcCchHHHHHHHHHHHHHHHHHH
Q 012217 413 MMEGEKGKQMRNKAMEWKGLAEEA 436 (468)
Q Consensus 413 ~l~~~~~~~~~~~a~~l~~~~~~a 436 (468)
.+... -..+-+.+.++++++++.
T Consensus 146 ~l~~~-~~~~~~~~~~~R~~~~~~ 168 (457)
T 1pjq_A 146 LLPQH-LGQVARYAGQLRARVKKQ 168 (457)
T ss_dssp HSCTT-HHHHHHHHHHHHHHHHHH
T ss_pred hcchh-HHHHHHHHHHHHHHHHhh
Confidence 77542 125666667777776654
No 141
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=25.59 E-value=83 Score=26.39 Aligned_cols=36 Identities=19% Similarity=0.383 Sum_probs=30.0
Q ss_pred EEEEEc--CCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012217 12 HAVCIP--SPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 12 ~il~~p--~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~ 47 (468)
+++.|. -++.|-..-...||..|+++|++|.++-..
T Consensus 2 ~vi~v~s~kgG~GKTt~a~~la~~la~~g~~vlliD~D 39 (206)
T 4dzz_A 2 KVISFLNPKGGSGKTTAVINIATALSRSGYNIAVVDTD 39 (206)
T ss_dssp EEEEECCSSTTSSHHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred eEEEEEeCCCCccHHHHHHHHHHHHHHCCCeEEEEECC
Confidence 445444 478999999999999999999999999664
No 142
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=25.35 E-value=66 Score=27.41 Aligned_cols=35 Identities=14% Similarity=0.400 Sum_probs=27.8
Q ss_pred EEEEEcCCCCc-----cHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 12 HAVCIPSPFQS-----HIKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 12 ~il~~p~p~~G-----Hi~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
.|+++|- .| -.++.-+|++.|.++|.+|.|..+|-
T Consensus 48 ~ViIVPG--YGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 87 (203)
T 2fsv_C 48 KVIIVPG--YGMAVAQAQHALREMADVLKKEGVEVSYAIHPV 87 (203)
T ss_dssp EEEEEEC--HHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred cEEEEcC--chHhHHHHHHHHHHHHHHHHHcCCeEEEEeccc
Confidence 6777763 22 24688999999999999999999874
No 143
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=25.14 E-value=23 Score=35.14 Aligned_cols=34 Identities=18% Similarity=0.194 Sum_probs=28.3
Q ss_pred CCcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012217 9 SKVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 9 ~~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~ 47 (468)
+.|||+++-++-.|. .||+.|.+.||+|+++=..
T Consensus 2 ~~M~iiI~G~G~vG~-----~la~~L~~~~~~v~vId~d 35 (461)
T 4g65_A 2 NAMKIIILGAGQVGG-----TLAENLVGENNDITIVDKD 35 (461)
T ss_dssp CCEEEEEECCSHHHH-----HHHHHTCSTTEEEEEEESC
T ss_pred CcCEEEEECCCHHHH-----HHHHHHHHCCCCEEEEECC
Confidence 478999998877664 6999999999999999653
No 144
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=25.13 E-value=41 Score=30.31 Aligned_cols=35 Identities=11% Similarity=0.115 Sum_probs=24.8
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~ 46 (468)
+.|-.++-.++.|-+ -..|++.|+++||+|+.+.-
T Consensus 10 ~~~~~vlVtGatG~i--G~~l~~~L~~~g~~V~~~~r 44 (292)
T 1vl0_A 10 HHHMKILITGANGQL--GREIQKQLKGKNVEVIPTDV 44 (292)
T ss_dssp --CEEEEEESTTSHH--HHHHHHHHTTSSEEEEEECT
T ss_pred cccceEEEECCCChH--HHHHHHHHHhCCCeEEeccC
Confidence 344444455788876 46788999999999998863
No 145
>2qs7_A Uncharacterized protein; putative oxidoreductase of the DSRE/DSRF-like family, struct genomics, joint center for structural genomics; HET: MSE EPE; 2.09A {Sulfolobus solfataricus P2}
Probab=25.05 E-value=94 Score=25.01 Aligned_cols=40 Identities=10% Similarity=0.054 Sum_probs=31.4
Q ss_pred cEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcch
Q 012217 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNH 50 (468)
Q Consensus 11 ~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~ 50 (468)
.-.+++..+..-.+.+-+.+|...++.|++|+++.+-.-.
T Consensus 9 kl~II~~sg~~d~~~~a~~lA~~Aaa~g~eV~iF~t~~gv 48 (144)
T 2qs7_A 9 KLSIIVFSGTIDKLMPVGILTSGAAASGYEVNLFFTFWGL 48 (144)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHHHHHTTCEEEEEECHHHH
T ss_pred CEEEEEEcCCHHHHHHHHHHHHHHHHcCCcEEEEEehHHH
Confidence 3445555567888999999999999999999999885443
No 146
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=24.73 E-value=69 Score=27.39 Aligned_cols=35 Identities=17% Similarity=0.260 Sum_probs=27.9
Q ss_pred EEEEEcCCCCc-----cHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 12 HAVCIPSPFQS-----HIKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 12 ~il~~p~p~~G-----Hi~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
.|+++|- .| =.++.-+|++.|.++|.+|.|..+|-
T Consensus 47 ~ViIVPG--YGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 86 (207)
T 1djl_A 47 SIIITPG--YGLCAAKAQYPIADLVKMLTEQGKKVRFGIHPV 86 (207)
T ss_dssp EEEEEEC--HHHHHHTCHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred eEEEECC--chHHHHHHhHHHHHHHHHHHHCCCeEEEEeCcc
Confidence 6777763 22 24688999999999999999999874
No 147
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=24.69 E-value=79 Score=29.25 Aligned_cols=32 Identities=16% Similarity=0.219 Sum_probs=27.3
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~ 46 (468)
.++|.++-.+..| ..+|+.|++.||+|+++..
T Consensus 31 ~~~I~iIG~G~mG-----~~~a~~l~~~G~~V~~~dr 62 (320)
T 4dll_A 31 ARKITFLGTGSMG-----LPMARRLCEAGYALQVWNR 62 (320)
T ss_dssp CSEEEEECCTTTH-----HHHHHHHHHTTCEEEEECS
T ss_pred CCEEEEECccHHH-----HHHHHHHHhCCCeEEEEcC
Confidence 4699999888888 5688999999999998854
No 148
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=24.11 E-value=47 Score=27.23 Aligned_cols=36 Identities=17% Similarity=0.175 Sum_probs=28.9
Q ss_pred cEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012217 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFN 49 (468)
Q Consensus 11 ~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~ 49 (468)
.+++++.- +.| +.|++.+++.|.++|.+|+++ ...+
T Consensus 24 ~~~llIaG-G~G-ItPl~sm~~~l~~~~~~v~l~-g~r~ 59 (158)
T 3lrx_A 24 GKILAIGA-YTG-IVEVYPIAKAWQEIGNDVTTL-HVTF 59 (158)
T ss_dssp SEEEEEEE-TTH-HHHHHHHHHHHHHHTCEEEEE-EECB
T ss_pred CeEEEEEc-cCc-HHHHHHHHHHHHhcCCcEEEE-EeCC
Confidence 47777774 445 999999999999999999999 6443
No 149
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=23.61 E-value=82 Score=28.62 Aligned_cols=32 Identities=16% Similarity=0.301 Sum_probs=25.3
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~ 46 (468)
+++|+++-.+..|. .+|..|+++||+|+++..
T Consensus 3 ~m~i~iiG~G~~G~-----~~a~~l~~~g~~V~~~~r 34 (316)
T 2ew2_A 3 AMKIAIAGAGAMGS-----RLGIMLHQGGNDVTLIDQ 34 (316)
T ss_dssp -CEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred CCeEEEECcCHHHH-----HHHHHHHhCCCcEEEEEC
Confidence 46899987766664 578899999999999865
No 150
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=23.56 E-value=44 Score=31.13 Aligned_cols=26 Identities=12% Similarity=0.163 Sum_probs=20.8
Q ss_pred ccHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012217 22 SHIKAMLKLAKLLHHKGFHITFVNTEFN 49 (468)
Q Consensus 22 GHi~P~l~La~~L~~rGh~Vt~~t~~~~ 49 (468)
|.+- ..+|+.+.++|++||+++.+..
T Consensus 65 GkmG--~aiAe~~~~~Ga~V~lv~g~~s 90 (313)
T 1p9o_A 65 GRRG--ATSAEAFLAAGYGVLFLYRARS 90 (313)
T ss_dssp CHHH--HHHHHHHHHTTCEEEEEEETTS
T ss_pred cHHH--HHHHHHHHHCCCEEEEEecCCC
Confidence 5443 5688999999999999998643
No 151
>1t5o_A EIF2BD, translation initiation factor EIF2B, subunit DELT; subunit delta, structural GEN PSI, protein structure initiative; 1.90A {Archaeoglobus fulgidus} SCOP: c.124.1.5
Probab=23.52 E-value=67 Score=30.45 Aligned_cols=20 Identities=10% Similarity=0.107 Sum_probs=15.0
Q ss_pred hHHHHHHHcCCCeEEEcccc
Q 012217 99 FTITAAQQLGLPIVLFFTIS 118 (468)
Q Consensus 99 ~~~~vA~~lgIP~v~~~~~~ 118 (468)
....+|+.+|||+++..++.
T Consensus 249 ~lAl~Ak~~~vPfyV~a~~~ 268 (351)
T 1t5o_A 249 TVSVVAKHHNIPFYVAAPKA 268 (351)
T ss_dssp HHHHHHHHTTCCEEEECCGG
T ss_pred HHHHHHHHcCCCEEEeCccc
Confidence 34557889999999986543
No 152
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=23.41 E-value=48 Score=30.55 Aligned_cols=32 Identities=16% Similarity=0.174 Sum_probs=26.1
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~ 46 (468)
.++|.++-.+..|. .+|+.|+++||+|+++..
T Consensus 9 ~~~IgiIG~G~mG~-----~~A~~l~~~G~~V~~~dr 40 (306)
T 3l6d_A 9 EFDVSVIGLGAMGT-----IMAQVLLKQGKRVAIWNR 40 (306)
T ss_dssp SCSEEEECCSHHHH-----HHHHHHHHTTCCEEEECS
T ss_pred CCeEEEECCCHHHH-----HHHHHHHHCCCEEEEEeC
Confidence 56899997776664 678999999999998854
No 153
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=23.30 E-value=1.2e+02 Score=28.29 Aligned_cols=19 Identities=11% Similarity=0.039 Sum_probs=14.4
Q ss_pred hHHHHHHHcCCCeEEEccc
Q 012217 99 FTITAAQQLGLPIVLFFTI 117 (468)
Q Consensus 99 ~~~~vA~~lgIP~v~~~~~ 117 (468)
....+|+.+|+|+++..++
T Consensus 214 ~iAl~Ak~~~vP~~V~a~~ 232 (315)
T 3ecs_A 214 QMAVCAKAQNKPFYVVAES 232 (315)
T ss_dssp HHHHHHHHTTCCEEEECCG
T ss_pred HHHHHHHHhCCCEEEEecc
Confidence 3455788999999998553
No 154
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=23.15 E-value=32 Score=31.56 Aligned_cols=26 Identities=31% Similarity=0.261 Sum_probs=22.7
Q ss_pred CCCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 19 PFQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 19 p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
=+.||+.=.+.||++|. +|+|++...
T Consensus 13 IG~GHvmRcl~LA~~l~----~v~F~~~~~ 38 (282)
T 3hbm_A 13 IGFGHIKRDLVLAKQYS----DVSFACLPL 38 (282)
T ss_dssp TBSHHHHHHHHHHTTCS----SEEEEECCC
T ss_pred ccccHHHHHHHHHHHHH----hCEEEEecC
Confidence 37899999999999998 799998653
No 155
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=22.98 E-value=66 Score=26.89 Aligned_cols=35 Identities=11% Similarity=0.249 Sum_probs=27.9
Q ss_pred EEEEEcCCCCc-----cHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 12 HAVCIPSPFQS-----HIKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 12 ~il~~p~p~~G-----Hi~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
.|+++|- .| =..+.-+|++.|.++|.+|.|...|-
T Consensus 32 ~ViIVPG--YGmAVAqAQ~~v~el~~~L~~~G~~V~faIHPV 71 (186)
T 2bru_C 32 SVIITPG--YGMAVAQAQYPVAEITEKLRARGINVRFGIHPV 71 (186)
T ss_dssp EEEEECS--BHHHHTTTHHHHHHHHHHHHHHCCEEEEEECSS
T ss_pred eEEEECC--hHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccc
Confidence 6677663 32 24689999999999999999999874
No 156
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=22.85 E-value=1.1e+02 Score=31.13 Aligned_cols=41 Identities=10% Similarity=-0.019 Sum_probs=36.5
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCcch
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEFNH 50 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~~ 50 (468)
+.+|++.+.++-.|-....-++..|..+|++|..+-.....
T Consensus 98 ~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~ 138 (579)
T 3bul_A 98 NGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPA 138 (579)
T ss_dssp SCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCH
T ss_pred CCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCH
Confidence 78999999999999999999999999999999988654333
No 157
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=22.71 E-value=45 Score=26.32 Aligned_cols=32 Identities=19% Similarity=0.173 Sum_probs=24.8
Q ss_pred cEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012217 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 11 ~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~ 47 (468)
.||+++-+ |.+ -..+|+.|.++||+|+++...
T Consensus 7 ~~v~I~G~---G~i--G~~la~~L~~~g~~V~~id~~ 38 (141)
T 3llv_A 7 YEYIVIGS---EAA--GVGLVRELTAAGKKVLAVDKS 38 (141)
T ss_dssp CSEEEECC---SHH--HHHHHHHHHHTTCCEEEEESC
T ss_pred CEEEEECC---CHH--HHHHHHHHHHCCCeEEEEECC
Confidence 47888865 443 467899999999999998653
No 158
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=22.52 E-value=1e+02 Score=28.26 Aligned_cols=39 Identities=5% Similarity=-0.082 Sum_probs=28.9
Q ss_pred CcEEEEEcCCCCc-c---HHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 10 KVHAVCIPSPFQS-H---IKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 10 ~~~il~~p~p~~G-H---i~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
+++|+++.-+-.+ | +.--..+++.|.+.||+|..+.+..
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~ 55 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAE 55 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTT
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 5788887754322 2 4567889999999999999997543
No 159
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=21.95 E-value=83 Score=29.23 Aligned_cols=33 Identities=21% Similarity=0.135 Sum_probs=28.1
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~ 46 (468)
..||.|+-.++.| |-.+|+.|+++||+|+..=.
T Consensus 4 ~~~i~~iGiGg~G----ms~~A~~L~~~G~~V~~~D~ 36 (326)
T 3eag_A 4 MKHIHIIGIGGTF----MGGLAAIAKEAGFEVSGCDA 36 (326)
T ss_dssp CCEEEEESCCSHH----HHHHHHHHHHTTCEEEEEES
T ss_pred CcEEEEEEECHHH----HHHHHHHHHhCCCEEEEEcC
Confidence 4589999999888 55799999999999999854
No 160
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=21.89 E-value=80 Score=26.57 Aligned_cols=101 Identities=11% Similarity=0.021 Sum_probs=54.1
Q ss_pred hhhhhccccCCCCceEEEeecC-CcCCCHHHHHHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEeccc
Q 012217 257 TECLQWLDCKEPKSVIYVNFGS-FIFMNKQQLIEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWC 335 (468)
Q Consensus 257 ~~~~~wld~~~~~~vv~vs~GS-~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 335 (468)
.++-++|.+. ....||.|. ..- .....++..+.|-.++=++.... ...+... -+...+++..
T Consensus 35 ~~lg~~La~~---g~~lVsGGg~~Gi-----m~aa~~gAl~~gG~tigVlP~~~-----~~~~~~~----~~~~i~~~~~ 97 (176)
T 2iz6_A 35 NELGKQIATH---GWILLTGGRSLGV-----MHEAMKGAKEAGGTTIGVLPGPD-----TSEISDA----VDIPIVTGLG 97 (176)
T ss_dssp HHHHHHHHHT---TCEEEEECSSSSH-----HHHHHHHHHHTTCCEEEEECC----------CCTT----CSEEEECCCC
T ss_pred HHHHHHHHHC---CCEEEECCCccCH-----hHHHHHHHHHcCCEEEEEeCchh-----hhhhccC----CceeEEcCCH
Confidence 3566677654 267777766 432 22334444445556665553210 0011000 0123345555
Q ss_pred Ch-HHhhcCCCcceeeeccChhhHHH---HHhcCCcEEecCCC
Q 012217 336 PQ-EEVLKHPSIGGFLTHCGWNSIVE---SLCSGVPMICWPFT 374 (468)
Q Consensus 336 p~-~~il~~~~~~~~v~hgG~~s~~e---al~~GvP~v~~P~~ 374 (468)
+. ..++..-+.+.++--||.||..| ++..++|++.+|.+
T Consensus 98 ~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 98 SARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp SSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 54 34444334456777899998665 56799999999983
No 161
>2bw0_A 10-FTHFDH, 10-formyltetrahydrofolate dehydrogenase; nucleotide biosynthesis, oxidoreductase; 1.7A {Homo sapiens} SCOP: b.46.1.1 c.65.1.1 PDB: 2cfi_A* 1s3i_A
Probab=21.80 E-value=2e+02 Score=26.76 Aligned_cols=32 Identities=16% Similarity=0.044 Sum_probs=22.2
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~ 46 (468)
+++|+|+- --+--..+.+.|.++||+|..+.+
T Consensus 22 ~mrIvf~G-----~~~fa~~~L~~L~~~~~~i~~Vvt 53 (329)
T 2bw0_A 22 SMKIAVIG-----QSLFGQEVYCHLRKEGHEVVGVFT 53 (329)
T ss_dssp CCEEEEEC-----CHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCEEEEEc-----CcHHHHHHHHHHHHCCCeEEEEEe
Confidence 58999992 222223467888899999876665
No 162
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=21.71 E-value=1.1e+02 Score=25.87 Aligned_cols=36 Identities=11% Similarity=0.127 Sum_probs=29.6
Q ss_pred cEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012217 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (468)
Q Consensus 11 ~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~ 46 (468)
..++++-.+..|+-.-+..+++.|+++|+.|..+-.
T Consensus 32 ~p~vv~~HG~~g~~~~~~~~~~~l~~~G~~v~~~d~ 67 (241)
T 3f67_A 32 LPIVIVVQEIFGVHEHIRDLCRRLAQEGYLAIAPEL 67 (241)
T ss_dssp EEEEEEECCTTCSCHHHHHHHHHHHHTTCEEEEECT
T ss_pred CCEEEEEcCcCccCHHHHHHHHHHHHCCcEEEEecc
Confidence 356666678888888899999999999999887754
No 163
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=21.69 E-value=59 Score=30.38 Aligned_cols=32 Identities=16% Similarity=0.067 Sum_probs=25.7
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~ 46 (468)
+++|+++-.+..|. .+|..|++.||+|+++..
T Consensus 4 ~mki~iiG~G~~G~-----~~a~~L~~~g~~V~~~~r 35 (359)
T 1bg6_A 4 SKTYAVLGLGNGGH-----AFAAYLALKGQSVLAWDI 35 (359)
T ss_dssp CCEEEEECCSHHHH-----HHHHHHHHTTCEEEEECS
T ss_pred cCeEEEECCCHHHH-----HHHHHHHhCCCEEEEEeC
Confidence 46999997766664 468889999999998865
No 164
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=21.57 E-value=96 Score=27.71 Aligned_cols=31 Identities=19% Similarity=0.239 Sum_probs=23.5
Q ss_pred cEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012217 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (468)
Q Consensus 11 ~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~ 46 (468)
++|+++ ++ |-+ -..|++.|.++||+|+.++-
T Consensus 4 ~~ilVt--Ga-G~i--G~~l~~~L~~~g~~V~~~~r 34 (286)
T 3gpi_A 4 SKILIA--GC-GDL--GLELARRLTAQGHEVTGLRR 34 (286)
T ss_dssp CCEEEE--CC-SHH--HHHHHHHHHHTTCCEEEEEC
T ss_pred CcEEEE--CC-CHH--HHHHHHHHHHCCCEEEEEeC
Confidence 466666 45 744 45788999999999999865
No 165
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=21.48 E-value=76 Score=29.46 Aligned_cols=35 Identities=9% Similarity=-0.165 Sum_probs=24.8
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCCc
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTEF 48 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~~ 48 (468)
+++|+++ ++.|.+- ..|++.|.++||+|+.++-..
T Consensus 10 ~~~IlVt--GatG~iG--~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 10 KGRVLIA--GATGFIG--QFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp -CCEEEE--CTTSHHH--HHHHHHHHHTTCCEEEEECSS
T ss_pred CCeEEEE--CCCcHHH--HHHHHHHHHCCCCEEEEECCC
Confidence 3455544 6667554 567889999999999987643
No 166
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=21.44 E-value=47 Score=28.74 Aligned_cols=28 Identities=18% Similarity=0.255 Sum_probs=21.7
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEE
Q 012217 12 HAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFV 44 (468)
Q Consensus 12 ~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~ 44 (468)
.|+++=.+-.| +.+|..|+++|++|+++
T Consensus 4 dV~IIGaGpaG-----L~aA~~La~~G~~V~v~ 31 (336)
T 3kkj_A 4 PIAIIGTGIAG-----LSAAQALTAAGHQVHLF 31 (336)
T ss_dssp CEEEECCSHHH-----HHHHHHHHHTTCCEEEE
T ss_pred CEEEECcCHHH-----HHHHHHHHHCCCCEEEE
Confidence 45666544444 78999999999999998
No 167
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=21.37 E-value=93 Score=26.72 Aligned_cols=36 Identities=19% Similarity=0.240 Sum_probs=26.9
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~ 46 (468)
++.|+++ .+..|+..-+..++..|.++|++|..+--
T Consensus 12 ~~~vvll-HG~~~~~~~~~~~~~~l~~~g~~v~~~D~ 47 (267)
T 3sty_A 12 KKHFVLV-HAAFHGAWCWYKIVALMRSSGHNVTALDL 47 (267)
T ss_dssp CCEEEEE-CCTTCCGGGGHHHHHHHHHTTCEEEEECC
T ss_pred CCeEEEE-CCCCCCcchHHHHHHHHHhcCCeEEEecc
Confidence 4555555 46667777788999999999999887744
No 168
>2vo1_A CTP synthase 1; pyrimidine biosynthesis, glutamine amidotransferase, phosphorylation, amidotransferase, cytidine 5-prime triphos synthetase, UTP; 2.8A {Homo sapiens} SCOP: c.37.1.10 PDB: 3ihl_A*
Probab=21.29 E-value=1.1e+02 Score=27.84 Aligned_cols=41 Identities=10% Similarity=0.105 Sum_probs=34.1
Q ss_pred CCcEEEEEcCC---CCccHHHHHHHHHHHHhCCCEEEEEeCCcc
Q 012217 9 SKVHAVCIPSP---FQSHIKAMLKLAKLLHHKGFHITFVNTEFN 49 (468)
Q Consensus 9 ~~~~il~~p~p---~~GHi~P~l~La~~L~~rGh~Vt~~t~~~~ 49 (468)
.+++.+|++-+ +-|-=.-.-.|++.|..||++||..--..+
T Consensus 21 ~~~KyIfVTGGVvS~lGKGi~aaSlg~lLk~~G~~Vt~~K~DPY 64 (295)
T 2vo1_A 21 QSMKYILVTGGVISGIGKGIIASSVGTILKSCGLHVTSIKIDPY 64 (295)
T ss_dssp CCCEEEEEEECSSSSSSHHHHHHHHHHHHHHTTCCEEEEEEECS
T ss_pred ccceEEEEcCCcccccccHHHHHHHHHHHHHCCCcceeeecccc
Confidence 36799999976 677888889999999999999999865443
No 169
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=21.25 E-value=89 Score=28.47 Aligned_cols=32 Identities=9% Similarity=-0.100 Sum_probs=23.5
Q ss_pred EEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012217 12 HAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 12 ~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~ 47 (468)
+|+++ ++.|.+ -..+++.|.++||+|+.++-.
T Consensus 13 ~ilVt--GatG~i--G~~l~~~L~~~g~~V~~l~R~ 44 (318)
T 2r6j_A 13 KILIF--GGTGYI--GNHMVKGSLKLGHPTYVFTRP 44 (318)
T ss_dssp CEEEE--TTTSTT--HHHHHHHHHHTTCCEEEEECT
T ss_pred eEEEE--CCCchH--HHHHHHHHHHCCCcEEEEECC
Confidence 45444 566665 357889999999999988754
No 170
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=21.18 E-value=1.7e+02 Score=28.13 Aligned_cols=60 Identities=17% Similarity=0.426 Sum_probs=38.6
Q ss_pred ChHHhhcCCCcceeeeccChhhHHHHHhc----CC-cEEecCCCCCcccchhhheeeceeEEEEeCCCCCcchhHHHHHH
Q 012217 336 PQEEVLKHPSIGGFLTHCGWNSIVESLCS----GV-PMICWPFTGDQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLV 410 (468)
Q Consensus 336 p~~~il~~~~~~~~v~hgG~~s~~eal~~----Gv-P~v~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av 410 (468)
+...+-..+++ +|+=||-||+..++.. ++ |+++++.. .+|. +. .++.+++.+++
T Consensus 107 ~~~~~~~~~Dl--VIvlGGDGTlL~aa~~~~~~~vpPiLGIN~G------------~lGF---Lt----~~~~~~~~~al 165 (388)
T 3afo_A 107 PEQDIVNRTDL--LVTLGGDGTILHGVSMFGNTQVPPVLAFALG------------TLGF---LS----PFDFKEHKKVF 165 (388)
T ss_dssp CHHHHHHHCSE--EEEEESHHHHHHHHHTTTTSCCCCEEEEECS------------SCCS---SC----CEEGGGHHHHH
T ss_pred chhhcccCCCE--EEEEeCcHHHHHHHHHhcccCCCeEEEEECC------------Cccc---CC----cCChHHHHHHH
Confidence 33445556776 9999999999999753 57 78888531 1111 11 24456777777
Q ss_pred HHHhcC
Q 012217 411 REMMEG 416 (468)
Q Consensus 411 ~~~l~~ 416 (468)
.+++++
T Consensus 166 ~~il~g 171 (388)
T 3afo_A 166 QEVISS 171 (388)
T ss_dssp HHHHTT
T ss_pred HHHhcC
Confidence 777754
No 171
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=21.18 E-value=3.2e+02 Score=27.38 Aligned_cols=28 Identities=14% Similarity=0.287 Sum_probs=23.3
Q ss_pred cCCCcceeeeccCh------hhHHHHHhcCCcEEec
Q 012217 342 KHPSIGGFLTHCGW------NSIVESLCSGVPMICW 371 (468)
Q Consensus 342 ~~~~~~~~v~hgG~------~s~~eal~~GvP~v~~ 371 (468)
..+.+ +++|.|- +.++||-+.++|+|++
T Consensus 72 g~p~v--~~~TsGpG~~N~~~~l~~A~~~~vPll~i 105 (566)
T 1ozh_A 72 GKAGV--ALVTSGPGCSNLITGMATANSEGDPVVAL 105 (566)
T ss_dssp SSCEE--EEECSTHHHHTTHHHHHHHHHHTCCEEEE
T ss_pred CCCEE--EEEccChHHHHHHHHHHHHHhcCCCEEEE
Confidence 34555 8889885 6889999999999997
No 172
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=21.16 E-value=1.1e+02 Score=28.18 Aligned_cols=33 Identities=9% Similarity=0.083 Sum_probs=24.1
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNT 46 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~ 46 (468)
.++|+++ ++.|.+ -.+|++.|+++||+|+.+.-
T Consensus 20 ~~~vlVT--GasG~i--G~~l~~~L~~~g~~V~~~~r 52 (330)
T 2pzm_A 20 HMRILIT--GGAGCL--GSNLIEHWLPQGHEILVIDN 52 (330)
T ss_dssp CCEEEEE--TTTSHH--HHHHHHHHGGGTCEEEEEEC
T ss_pred CCEEEEE--CCCCHH--HHHHHHHHHHCCCEEEEEEC
Confidence 3455443 666766 36789999999999998864
No 173
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=21.04 E-value=1.5e+02 Score=26.92 Aligned_cols=34 Identities=6% Similarity=0.099 Sum_probs=24.3
Q ss_pred CcEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012217 10 KVHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 10 ~~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~ 47 (468)
.++|++. ++.|.+- .+|++.|+++||+|+.+.-.
T Consensus 11 ~~~vlVT--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 44 (342)
T 1y1p_A 11 GSLVLVT--GANGFVA--SHVVEQLLEHGYKVRGTARS 44 (342)
T ss_dssp TCEEEEE--TTTSHHH--HHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEEE--CCccHHH--HHHHHHHHHCCCEEEEEeCC
Confidence 3455443 6667664 57889999999999988653
No 174
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=20.51 E-value=4.1e+02 Score=22.90 Aligned_cols=102 Identities=13% Similarity=0.153 Sum_probs=62.9
Q ss_pred HHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHHHhcCCc
Q 012217 288 IEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVP 367 (468)
Q Consensus 288 ~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP 367 (468)
.++++.|++.+..+++..+.. ..+|+.+.+..+.++.= -||+. .=...|+..+..|+.+|+.
T Consensus 72 ~~~~~~L~~~~~Dlivlagy~------~IL~~~~l~~~~~~~iN----------iHpSL--LP~yrG~~pi~~Ai~~G~~ 133 (215)
T 3kcq_A 72 EHISTVLREHDVDLVCLAGFM------SILPEKFVTDWHHKIIN----------IHPSL--LPSFKGLNAQEQAYKAGVK 133 (215)
T ss_dssp HHHHHHHHHTTCSEEEESSCC------SCCCHHHHHHTTTSEEE----------EESSC--TTTTCSSCHHHHHHHHTCS
T ss_pred HHHHHHHHHhCCCEEEEeCCc------eEeCHHHHhhccCCeEE----------ECccc--ccCCCCccHHHHHHHcCCC
Confidence 456677777788888877754 45777777654432221 12332 2234589999999999998
Q ss_pred EEecCCCC--CcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHH
Q 012217 368 MICWPFTG--DQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREM 413 (468)
Q Consensus 368 ~v~~P~~~--DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~ 413 (468)
..++=.+. +..+.+..+.++ -+.+. ..-|.++|.+.+.++
T Consensus 134 ~tGvTvh~v~~~lD~G~Ii~Q~---~v~I~---~~dt~~~L~~rl~~~ 175 (215)
T 3kcq_A 134 IAGCTLHYVYQELDAGPIIMQA---AVPVL---REDTAESLASRILAA 175 (215)
T ss_dssp EEEEEEEECCSSTTCSCEEEEE---EEECC---TTCCHHHHHHHHHHH
T ss_pred eEEEEEEEEcCCCCCCCEEEEE---EeecC---CCCCHHHHHHHHHHH
Confidence 87776632 445555555322 34444 355778887766643
No 175
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=20.41 E-value=1.1e+02 Score=26.14 Aligned_cols=33 Identities=21% Similarity=0.208 Sum_probs=24.6
Q ss_pred cEEEEEcCCCCccHHHHHHHHHHHHhCCCEEEEEeCC
Q 012217 11 VHAVCIPSPFQSHIKAMLKLAKLLHHKGFHITFVNTE 47 (468)
Q Consensus 11 ~~il~~p~p~~GHi~P~l~La~~L~~rGh~Vt~~t~~ 47 (468)
++|+++ ++.|.+- ..|++.|+++||+|+.+.-.
T Consensus 5 ~~ilIt--GatG~iG--~~l~~~L~~~g~~V~~~~r~ 37 (227)
T 3dhn_A 5 KKIVLI--GASGFVG--SALLNEALNRGFEVTAVVRH 37 (227)
T ss_dssp CEEEEE--TCCHHHH--HHHHHHHHTTTCEEEEECSC
T ss_pred CEEEEE--cCCchHH--HHHHHHHHHCCCEEEEEEcC
Confidence 465544 6667654 57889999999999998654
No 176
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=20.17 E-value=4.1e+02 Score=24.19 Aligned_cols=102 Identities=13% Similarity=0.083 Sum_probs=64.0
Q ss_pred HHHHHHHHcCCCCEEEEEcCCCCCCCCCCCchhHHHHhhcCceEecccChHHhhcCCCcceeeeccChhhHHHHHhcCCc
Q 012217 288 IEVAMGLVNSNHPFLWIIRPDLVTGETADLPAEFEVKAKEKGFVASWCPQEEVLKHPSIGGFLTHCGWNSIVESLCSGVP 367 (468)
Q Consensus 288 ~~~~~~l~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~p~~~il~~~~~~~~v~hgG~~s~~eal~~GvP 367 (468)
.++++.|++.+..+++..+.. ..+|+.+.+..+.++.=+ ||+. .=...|++....|+.+|+.
T Consensus 161 ~~~~~~l~~~~~Dlivla~y~------~il~~~~l~~~~~~~iNi----------HpSl--LP~~rG~~p~~~Ai~~G~~ 222 (292)
T 3lou_A 161 AQWLDVFETSGAELVILARYM------QVLSPEASARLANRAINI----------HHSF--LPGFKGAKPYHQAHARGVK 222 (292)
T ss_dssp HHHHHHHHHHTCSEEEESSCC------SCCCHHHHHHTTTSEEEE----------EEEC--SSCCCSSCHHHHHHHHTCS
T ss_pred HHHHHHHHHhCCCEEEecCch------hhCCHHHHhhhcCCeEEe----------CCCc--CcCCCCccHHHHHHHcCCC
Confidence 457777777778888777754 457888776654332211 2222 2234589999999999999
Q ss_pred EEecCCCC--CcccchhhheeeceeEEEEeCCCCCcchhHHHHHHHHH
Q 012217 368 MICWPFTG--DQPTNGRYVCNEWGVGMEINGDDEDVIRNEVEKLVREM 413 (468)
Q Consensus 368 ~v~~P~~~--DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~l~~av~~~ 413 (468)
..++=.+. +..+.+..+.++ -+.+. ..-|.++|.+.+.++
T Consensus 223 ~~G~Tvh~v~~~lD~G~Ii~Q~---~v~i~---~~dt~~~L~~r~~~~ 264 (292)
T 3lou_A 223 LIGATAHFVTDDLDEGPIIEQV---VERVD---HSYRPEQLLAVGRDV 264 (292)
T ss_dssp EEEEEEEECCSSTTCSCEEEEE---EEECC---TTCCHHHHHHHHHHH
T ss_pred eEEEEEEEEcCCCcCCCEEEEE---EEEcC---CCCCHHHHHHHHHHH
Confidence 88776633 444455444222 34444 456788888777654
No 177
>1jx7_A Hypothetical protein YCHN; NEW fold, hexamer, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; 2.80A {Escherichia coli} SCOP: c.114.1.1
Probab=20.08 E-value=1.2e+02 Score=22.78 Aligned_cols=30 Identities=13% Similarity=0.039 Sum_probs=23.7
Q ss_pred CCccHHHHHHHHHHHHhC-CC-EEEEEeCCcc
Q 012217 20 FQSHIKAMLKLAKLLHHK-GF-HITFVNTEFN 49 (468)
Q Consensus 20 ~~GHi~P~l~La~~L~~r-Gh-~Vt~~t~~~~ 49 (468)
+......-+.+|..+++. || +|+++-....
T Consensus 14 ~~~~~~~al~~a~~~~~~~g~~~v~vff~~dg 45 (117)
T 1jx7_A 14 GSESLFNSLRLAIALREQESNLDLRLFLMSDA 45 (117)
T ss_dssp TCSHHHHHHHHHHHHHHHCTTCEEEEEECGGG
T ss_pred CcHHHHHHHHHHHHHHhcCCCccEEEEEEchH
Confidence 345667789999999999 99 9998876443
Done!