Query 012218
Match_columns 468
No_of_seqs 442 out of 1661
Neff 5.3
Searched_HMMs 29240
Date Mon Mar 25 05:05:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012218.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/012218hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iwh_A Rhodanese-like domain p 99.9 4.6E-24 1.6E-28 181.9 9.4 101 270-401 2-102 (103)
2 3foj_A Uncharacterized protein 99.9 1.6E-23 5.5E-28 175.5 9.2 99 270-399 2-100 (100)
3 3eme_A Rhodanese-like domain p 99.9 2.4E-23 8.4E-28 175.0 9.4 101 270-401 2-102 (103)
4 3gk5_A Uncharacterized rhodane 99.9 3E-22 1E-26 170.6 8.8 101 270-404 4-104 (108)
5 3d1p_A Putative thiosulfate su 99.9 4.9E-22 1.7E-26 175.3 9.0 115 270-401 23-138 (139)
6 1gmx_A GLPE protein; transfera 99.9 5.1E-22 1.7E-26 168.3 8.6 101 270-402 5-105 (108)
7 1qxn_A SUD, sulfide dehydrogen 99.9 1.1E-21 3.8E-26 174.1 9.8 107 270-404 23-132 (137)
8 2hhg_A Hypothetical protein RP 99.9 2E-21 7E-26 170.8 10.9 113 270-404 22-136 (139)
9 3hix_A ALR3790 protein; rhodan 99.8 1E-21 3.5E-26 166.6 7.9 100 276-404 2-102 (106)
10 3ilm_A ALR3790 protein; rhodan 99.8 1.9E-21 6.6E-26 173.8 9.2 104 272-404 2-106 (141)
11 3nhv_A BH2092 protein; alpha-b 99.8 8.2E-21 2.8E-25 170.1 10.8 105 270-405 16-124 (144)
12 1tq1_A AT5G66040, senescence-a 99.8 5.7E-21 2E-25 167.3 7.6 111 270-400 18-128 (129)
13 3flh_A Uncharacterized protein 99.8 8.7E-21 3E-25 165.1 8.2 101 271-402 16-120 (124)
14 1e0c_A Rhodanese, sulfurtransf 99.8 9.8E-21 3.3E-25 183.7 7.6 115 271-401 148-271 (271)
15 1e0c_A Rhodanese, sulfurtransf 99.8 4.4E-20 1.5E-24 179.1 11.3 120 270-404 9-132 (271)
16 1wv9_A Rhodanese homolog TT165 99.8 6.4E-21 2.2E-25 157.9 4.2 92 271-396 3-94 (94)
17 3i2v_A Adenylyltransferase and 99.8 4.4E-20 1.5E-24 158.9 9.6 116 271-399 2-123 (127)
18 2fsx_A RV0390, COG0607: rhodan 99.8 1.9E-20 6.4E-25 167.5 6.4 117 268-403 3-141 (148)
19 2wlr_A Putative thiosulfate su 99.8 5.9E-20 2E-24 190.3 10.7 209 159-403 4-252 (423)
20 2k0z_A Uncharacterized protein 99.8 7.7E-21 2.6E-25 162.2 2.7 99 271-403 6-104 (110)
21 1rhs_A Sulfur-substituted rhod 99.8 2.9E-20 9.9E-25 183.5 6.4 117 271-403 161-290 (296)
22 1urh_A 3-mercaptopyruvate sulf 99.8 1.3E-19 4.5E-24 176.8 9.8 120 270-404 4-137 (280)
23 1urh_A 3-mercaptopyruvate sulf 99.8 2.5E-20 8.6E-25 181.9 4.7 114 272-402 154-279 (280)
24 3hzu_A Thiosulfate sulfurtrans 99.8 1.7E-19 5.9E-24 180.7 10.2 119 271-404 41-162 (318)
25 1vee_A Proline-rich protein fa 99.8 8.5E-20 2.9E-24 160.9 6.4 113 269-403 4-126 (134)
26 1rhs_A Sulfur-substituted rhod 99.8 3.5E-19 1.2E-23 175.7 11.5 122 268-403 6-144 (296)
27 1t3k_A Arath CDC25, dual-speci 99.8 8.9E-20 3.1E-24 164.7 5.7 108 270-404 28-144 (152)
28 1uar_A Rhodanese; sulfurtransf 99.8 2.3E-19 7.8E-24 175.2 8.9 116 272-402 148-283 (285)
29 3aay_A Putative thiosulfate su 99.8 4.3E-19 1.5E-23 172.6 9.2 119 271-404 7-128 (277)
30 1uar_A Rhodanese; sulfurtransf 99.8 3E-19 1E-23 174.4 7.2 119 271-404 9-130 (285)
31 3g5j_A Putative ATP/GTP bindin 99.8 7.3E-19 2.5E-23 152.0 7.5 109 270-396 5-131 (134)
32 3olh_A MST, 3-mercaptopyruvate 99.8 2.7E-18 9.3E-23 170.8 12.5 121 269-403 21-159 (302)
33 3tp9_A Beta-lactamase and rhod 99.8 5.7E-19 2E-23 184.7 7.4 191 159-401 273-474 (474)
34 3hzu_A Thiosulfate sulfurtrans 99.8 2.5E-18 8.5E-23 172.3 11.2 113 272-404 181-311 (318)
35 2jtq_A Phage shock protein E; 99.7 1.3E-18 4.3E-23 141.3 5.4 84 286-401 1-84 (85)
36 2a2k_A M-phase inducer phospha 99.7 4.7E-18 1.6E-22 155.5 9.6 132 270-426 24-173 (175)
37 3olh_A MST, 3-mercaptopyruvate 99.7 2.7E-18 9.3E-23 170.7 7.4 112 272-399 177-299 (302)
38 3aay_A Putative thiosulfate su 99.7 4.8E-18 1.6E-22 165.3 8.9 113 272-402 146-276 (277)
39 1c25_A CDC25A; hydrolase, cell 99.7 4.9E-18 1.7E-22 153.1 7.8 108 270-402 23-148 (161)
40 2vsw_A Dual specificity protei 99.7 1.5E-18 5.3E-23 155.0 4.0 122 270-403 4-135 (153)
41 2ouc_A Dual specificity protei 99.7 8.5E-18 2.9E-22 146.4 7.9 120 271-402 2-139 (142)
42 1okg_A Possible 3-mercaptopyru 99.7 3.7E-18 1.3E-22 175.2 6.5 115 270-402 14-144 (373)
43 1yt8_A Thiosulfate sulfurtrans 99.7 9E-18 3.1E-22 179.3 9.4 197 160-405 266-481 (539)
44 2j6p_A SB(V)-AS(V) reductase; 99.7 1.9E-17 6.4E-22 149.1 9.7 108 270-402 5-123 (152)
45 1yt8_A Thiosulfate sulfurtrans 99.7 3.1E-17 1.1E-21 175.1 11.3 106 270-403 7-112 (539)
46 1qb0_A Protein (M-phase induce 99.7 7.1E-17 2.4E-21 153.1 10.7 108 270-402 44-170 (211)
47 4f67_A UPF0176 protein LPG2838 99.7 1E-16 3.4E-21 158.2 9.9 103 270-397 122-224 (265)
48 3f4a_A Uncharacterized protein 99.7 6.6E-17 2.2E-21 148.9 7.6 113 270-402 31-159 (169)
49 2wlr_A Putative thiosulfate su 99.7 7.5E-17 2.6E-21 167.0 8.8 117 272-404 274-409 (423)
50 2eg4_A Probable thiosulfate su 99.7 1.4E-16 4.8E-21 151.5 9.7 99 271-401 122-230 (230)
51 1hzm_A Dual specificity protei 99.6 5.5E-17 1.9E-21 144.6 4.3 108 270-395 16-142 (154)
52 3op3_A M-phase inducer phospha 99.6 2.2E-16 7.4E-21 151.4 7.8 107 270-401 57-182 (216)
53 3ntd_A FAD-dependent pyridine 99.6 6.1E-16 2.1E-20 163.5 8.5 96 267-396 470-565 (565)
54 1okg_A Possible 3-mercaptopyru 99.6 3.1E-16 1.1E-20 160.9 4.5 104 285-402 173-295 (373)
55 3tg1_B Dual specificity protei 99.6 1.7E-15 5.9E-20 136.8 8.5 107 270-395 11-142 (158)
56 3utn_X Thiosulfate sulfurtrans 99.6 2.8E-15 9.6E-20 151.9 9.9 122 270-403 28-162 (327)
57 3ics_A Coenzyme A-disulfide re 99.6 3.2E-15 1.1E-19 159.6 9.1 97 266-395 485-581 (588)
58 2eg4_A Probable thiosulfate su 99.6 2.6E-15 8.8E-20 142.8 7.1 98 283-402 3-104 (230)
59 1whb_A KIAA0055; deubiqutinati 99.5 5.1E-15 1.7E-19 133.7 7.0 116 270-404 15-149 (157)
60 2gwf_A Ubiquitin carboxyl-term 99.5 1.2E-14 4E-19 131.8 8.9 114 270-402 20-152 (157)
61 3utn_X Thiosulfate sulfurtrans 99.5 9.9E-14 3.4E-18 140.5 12.3 192 189-398 71-319 (327)
62 3r2u_A Metallo-beta-lactamase 99.5 5.6E-15 1.9E-19 155.1 0.0 87 277-394 379-465 (466)
63 3tp9_A Beta-lactamase and rhod 99.4 3.2E-13 1.1E-17 141.2 6.1 100 270-402 273-373 (474)
64 3r2u_A Metallo-beta-lactamase 98.9 6.1E-10 2.1E-14 116.8 6.7 80 284-393 294-375 (466)
65 2f46_A Hypothetical protein; s 96.3 0.0052 1.8E-07 54.7 6.2 105 270-401 28-146 (156)
66 2nt2_A Protein phosphatase sli 82.4 3.8 0.00013 35.0 7.5 27 353-379 80-109 (145)
67 2r0b_A Serine/threonine/tyrosi 81.6 3.6 0.00012 35.4 7.1 27 353-379 89-118 (154)
68 3rgo_A Protein-tyrosine phosph 77.6 1.5 5.1E-05 37.7 3.3 27 353-379 88-117 (157)
69 2e0t_A Dual specificity phosph 77.0 3.6 0.00012 35.3 5.6 28 353-380 84-114 (151)
70 2hcm_A Dual specificity protei 75.8 7.3 0.00025 34.0 7.4 27 353-379 88-117 (164)
71 3h8v_A Ubiquitin-like modifier 73.8 1.2 4.3E-05 44.0 2.0 50 189-239 187-241 (292)
72 4erc_A Dual specificity protei 72.4 11 0.00037 31.9 7.4 90 273-379 24-116 (150)
73 2img_A Dual specificity protei 72.0 8.2 0.00028 32.5 6.5 19 353-371 88-107 (151)
74 1xri_A AT1G05000; structural g 70.8 2.6 9E-05 36.2 3.1 27 353-379 91-119 (151)
75 1yz4_A DUSP15, dual specificit 69.8 12 0.0004 32.5 7.2 28 353-380 83-113 (160)
76 1wrm_A Dual specificity phosph 69.6 12 0.0004 32.8 7.2 27 353-379 82-111 (165)
77 3s4e_A Dual specificity protei 68.3 9.2 0.00031 32.6 6.1 27 353-379 80-109 (144)
78 3ezz_A Dual specificity protei 66.5 20 0.00068 30.3 7.8 27 353-379 80-109 (144)
79 1zzw_A Dual specificity protei 66.2 12 0.0004 32.0 6.3 27 353-379 82-111 (149)
80 2g6z_A Dual specificity protei 64.6 16 0.00054 34.0 7.4 27 353-379 82-111 (211)
81 1v8c_A MOAD related protein; r 62.2 1.1 3.8E-05 40.9 -1.1 26 287-324 122-147 (168)
82 1ywf_A Phosphotyrosine protein 60.8 27 0.00092 34.1 8.5 31 270-301 54-84 (296)
83 3f81_A Dual specificity protei 60.1 29 0.00099 30.5 8.0 26 354-379 115-143 (183)
84 3rz2_A Protein tyrosine phosph 59.5 24 0.00081 31.6 7.4 28 352-379 115-144 (189)
85 2esb_A Dual specificity protei 59.3 31 0.0011 30.9 8.1 28 353-380 96-126 (188)
86 2wgp_A Dual specificity protei 56.4 32 0.0011 31.0 7.7 27 353-379 102-131 (190)
87 2j16_A SDP-1, tyrosine-protein 55.1 17 0.00057 33.1 5.6 27 353-379 116-145 (182)
88 2oud_A Dual specificity protei 54.8 24 0.00082 31.2 6.5 27 353-379 86-115 (177)
89 3emu_A Leucine rich repeat and 53.1 15 0.00052 32.2 4.8 28 353-380 86-116 (161)
90 3rui_A Ubiquitin-like modifier 53.0 4.7 0.00016 40.8 1.6 48 189-237 193-242 (340)
91 3h5n_A MCCB protein; ubiquitin 51.5 6.9 0.00024 39.3 2.5 46 189-237 258-316 (353)
92 1jzt_A Hypothetical 27.5 kDa p 47.9 24 0.00084 33.7 5.7 45 355-400 59-117 (246)
93 1fpz_A Cyclin-dependent kinase 45.6 31 0.0011 31.3 5.8 24 353-376 132-157 (212)
94 2jgn_A DBX, DDX3, ATP-dependen 44.9 18 0.00062 32.2 4.0 38 352-390 44-81 (185)
95 1rxd_A Protein tyrosine phosph 44.3 33 0.0011 28.9 5.5 28 352-379 94-123 (159)
96 3cm3_A Late protein H1, dual s 43.7 39 0.0013 29.6 6.0 28 353-380 107-137 (176)
97 2q05_A Late protein H1, dual s 43.3 63 0.0022 29.0 7.5 27 353-379 124-153 (195)
98 3s4o_A Protein tyrosine phosph 42.2 51 0.0018 27.9 6.4 24 353-376 108-133 (167)
99 2o8n_A APOA-I binding protein; 41.6 43 0.0015 32.5 6.4 45 355-400 80-137 (265)
100 1t5i_A C_terminal domain of A 41.4 36 0.0012 29.7 5.4 37 353-390 30-66 (172)
101 2hjv_A ATP-dependent RNA helic 41.1 30 0.001 29.8 4.7 36 353-389 34-69 (163)
102 4gsl_A Ubiquitin-like modifier 40.1 13 0.00044 40.6 2.6 48 189-237 485-534 (615)
103 4fak_A Ribosomal RNA large sub 37.8 45 0.0015 30.2 5.5 43 348-390 68-115 (163)
104 3nme_A Ptpkis1 protein, SEX4 g 36.6 52 0.0018 32.0 6.1 26 354-379 106-134 (294)
105 1fuk_A Eukaryotic initiation f 35.7 60 0.0021 27.8 5.8 36 353-389 29-64 (165)
106 2rb4_A ATP-dependent RNA helic 35.3 27 0.00091 30.4 3.5 36 353-389 33-68 (175)
107 3d3k_A Enhancer of mRNA-decapp 35.0 37 0.0013 32.7 4.7 30 355-385 86-118 (259)
108 1ohe_A CDC14B, CDC14B2 phospha 33.4 76 0.0026 31.7 6.9 28 352-379 267-297 (348)
109 3rss_A Putative uncharacterize 31.9 41 0.0014 35.5 4.8 48 353-400 51-110 (502)
110 1tvm_A PTS system, galactitol- 31.8 36 0.0012 28.4 3.5 28 353-380 20-52 (113)
111 3d3j_A Enhancer of mRNA-decapp 31.7 44 0.0015 33.0 4.7 30 355-385 133-165 (306)
112 3ghg_B Fibrinogen beta chain; 31.6 48 0.0017 34.9 5.2 103 68-179 72-181 (461)
113 1zud_1 Adenylyltransferase THI 31.3 12 0.00042 35.4 0.6 44 189-235 167-210 (251)
114 3eaq_A Heat resistant RNA depe 31.1 51 0.0017 29.8 4.8 36 353-389 30-65 (212)
115 1jw9_B Molybdopterin biosynthe 30.4 9.6 0.00033 36.1 -0.3 45 189-236 170-214 (249)
116 4f0j_A Probable hydrolytic enz 29.8 1.1E+02 0.0038 27.1 6.8 80 353-438 44-127 (315)
117 3to5_A CHEY homolog; alpha(5)b 29.4 74 0.0025 27.1 5.3 43 352-394 10-52 (134)
118 3zbh_A ESXA; unknown function, 27.8 15 0.00051 28.9 0.5 47 90-136 18-64 (99)
119 2hxp_A Dual specificity protei 27.1 54 0.0018 28.2 4.0 27 353-379 84-113 (155)
120 2c46_A MRNA capping enzyme; ph 27.0 42 0.0014 31.7 3.5 27 353-379 140-169 (241)
121 3llc_A Putative hydrolase; str 26.5 1.1E+02 0.0039 26.4 6.1 80 355-441 37-122 (270)
122 4ioe_A Secreted protein ESXB; 25.9 19 0.00065 28.2 0.7 46 90-135 18-63 (93)
123 3gwk_C SAG1039, putative uncha 25.2 13 0.00043 29.7 -0.4 62 90-151 17-78 (98)
124 2i4i_A ATP-dependent RNA helic 25.0 59 0.002 31.5 4.3 37 352-389 274-310 (417)
125 3nbm_A PTS system, lactose-spe 23.6 62 0.0021 27.0 3.6 28 352-379 4-35 (108)
126 2i6j_A Ssoptp, sulfolobus solf 23.1 1.4E+02 0.0049 25.0 5.9 25 274-299 18-42 (161)
127 1to0_A Hypothetical UPF0247 pr 22.7 67 0.0023 29.2 3.8 43 349-391 65-112 (167)
128 2p6n_A ATP-dependent RNA helic 22.5 67 0.0023 28.7 3.8 35 354-389 54-88 (191)
129 3v0d_A Voltage-sensor containi 22.5 1.7E+02 0.0057 29.2 7.1 28 352-379 117-146 (339)
130 3ohg_A Uncharacterized protein 22.5 76 0.0026 31.1 4.4 26 364-389 218-243 (285)
131 3keo_A Redox-sensing transcrip 21.8 61 0.0021 30.4 3.5 33 354-386 148-180 (212)
132 1u2p_A Ptpase, low molecular w 21.6 51 0.0017 29.1 2.8 38 355-392 5-48 (163)
133 3qit_A CURM TE, polyketide syn 20.9 2.4E+02 0.0083 24.1 7.1 82 353-439 24-109 (286)
134 2v1x_A ATP-dependent DNA helic 20.6 76 0.0026 33.8 4.4 36 353-389 266-301 (591)
135 3rof_A Low molecular weight pr 20.6 57 0.0019 29.0 2.8 38 355-392 7-49 (158)
136 2cwd_A Low molecular weight ph 20.5 42 0.0014 29.7 2.0 40 353-392 3-48 (161)
No 1
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=99.90 E-value=4.6e-24 Score=181.90 Aligned_cols=101 Identities=22% Similarity=0.377 Sum_probs=90.3
Q ss_pred cccCHHHHHHHHhCCCCcEEEEcCChhhHhhcCCCCCcccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhc
Q 012218 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (468)
Q Consensus 270 ~~ISp~el~elL~~~~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l~alGI~~Lk 349 (468)
++||++|+.+++.++++++|||||++.||+.||||||+ |+|+.++...+.+
T Consensus 2 k~Is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~~--------------------- 52 (103)
T 3iwh_A 2 KSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAK--------LIPMDTIPDNLNS--------------------- 52 (103)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCE--------ECCGGGGGGCGGG---------------------
T ss_pred CCcCHHHHHHHHhCCCCeEEEECCChhHHhcCccCCcc--------cCcccchhhhhhh---------------------
Confidence 46999999999877778999999999999999999999 9999887654432
Q ss_pred ccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCccc
Q 012218 350 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKE 401 (468)
Q Consensus 350 ~l~kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv~~ 401 (468)
++++++||+||++|.||..+++.|++.||+ +++|.||+.+|+++|+|++.
T Consensus 53 -l~~~~~ivv~C~~G~rS~~aa~~L~~~G~~-~~~l~GG~~~W~~~g~pves 102 (103)
T 3iwh_A 53 -FNKNEIYYIVCAGGVRSAKVVEYLEANGID-AVNVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp -CCTTSEEEEECSSSSHHHHHHHHHHTTTCE-EEEETTHHHHHCSSSCBCCC
T ss_pred -hcCCCeEEEECCCCHHHHHHHHHHHHcCCC-EEEecChHHHHHHCCCccee
Confidence 378999999999999999999999999995 55799999999999999874
No 2
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=99.89 E-value=1.6e-23 Score=175.50 Aligned_cols=99 Identities=20% Similarity=0.324 Sum_probs=89.3
Q ss_pred cccCHHHHHHHHhCCCCcEEEEcCChhhHhhcCCCCCcccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhc
Q 012218 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (468)
Q Consensus 270 ~~ISp~el~elL~~~~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l~alGI~~Lk 349 (468)
..|+++++.++++++++++|||||++.||..||||||+ |+|+.++...+.+
T Consensus 2 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~~--------------------- 52 (100)
T 3foj_A 2 ESITVTELKEKILDANPVNIVDVRTDQETAMGIIPGAE--------TIPMNSIPDNLNY--------------------- 52 (100)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCE--------ECCGGGGGGCGGG---------------------
T ss_pred CccCHHHHHHHHhcCCCcEEEECCCHHHHhcCcCCCCE--------ECCHHHHHHHHHh---------------------
Confidence 36899999999866678999999999999999999999 9999877654332
Q ss_pred ccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCc
Q 012218 350 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRI 399 (468)
Q Consensus 350 ~l~kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv 399 (468)
++++++||+||++|.||..+++.|+++|| +|++|+||+.+|.++|+|+
T Consensus 53 -l~~~~~ivvyC~~g~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~pv 100 (100)
T 3foj_A 53 -FNDNETYYIICKAGGRSAQVVQYLEQNGV-NAVNVEGGMDEFGDEGLEH 100 (100)
T ss_dssp -SCTTSEEEEECSSSHHHHHHHHHHHTTTC-EEEEETTHHHHHCSSSCBC
T ss_pred -CCCCCcEEEEcCCCchHHHHHHHHHHCCC-CEEEecccHHHHHHcCCCC
Confidence 37889999999999999999999999999 9999999999999999986
No 3
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=99.89 E-value=2.4e-23 Score=175.02 Aligned_cols=101 Identities=22% Similarity=0.386 Sum_probs=90.7
Q ss_pred cccCHHHHHHHHhCCCCcEEEEcCChhhHhhcCCCCCcccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhc
Q 012218 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (468)
Q Consensus 270 ~~ISp~el~elL~~~~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l~alGI~~Lk 349 (468)
..|+++++.++++++++.+|||||++.||..||||||+ |+|+.++...+..
T Consensus 2 ~~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~~--------------------- 52 (103)
T 3eme_A 2 KSITTDELKNKLLESKPVQIVDVRTDEETAMGYIPNAK--------LIPMDTIPDNLNS--------------------- 52 (103)
T ss_dssp CEECHHHHHHGGGSSSCCEEEECSCHHHHTTCBCTTCE--------ECCGGGGGGCGGG---------------------
T ss_pred CccCHHHHHHHHhcCCCCEEEECCCHHHHhcCcCCCCE--------EcCHHHHHHHHHh---------------------
Confidence 36899999999866678999999999999999999999 9999877654332
Q ss_pred ccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCccc
Q 012218 350 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKE 401 (468)
Q Consensus 350 ~l~kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv~~ 401 (468)
++++++||+||++|.||..+++.|+.+|| +|++|+||+.+|+++|+|+++
T Consensus 53 -l~~~~~iv~yC~~g~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~g~p~~~ 102 (103)
T 3eme_A 53 -FNKNEIYYIVCAGGVRSAKVVEYLEANGI-DAVNVEGGMHAWGDEGLEIKS 102 (103)
T ss_dssp -CCTTSEEEEECSSSSHHHHHHHHHHTTTC-EEEEETTHHHHHCSSSCBCCC
T ss_pred -CCCCCeEEEECCCChHHHHHHHHHHHCCC-CeEEeCCCHHHHHHCCCcCCC
Confidence 37889999999999999999999999999 999999999999999999875
No 4
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=99.86 E-value=3e-22 Score=170.63 Aligned_cols=101 Identities=24% Similarity=0.327 Sum_probs=88.6
Q ss_pred cccCHHHHHHHHhCCCCcEEEEcCChhhHhhcCCCCCcccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhc
Q 012218 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (468)
Q Consensus 270 ~~ISp~el~elL~~~~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l~alGI~~Lk 349 (468)
..|+++++.++++ + ++|||||++.||..||||||+ |+|+.++...+..
T Consensus 4 ~~is~~el~~~l~-~--~~iiDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~~--------------------- 51 (108)
T 3gk5_A 4 RSINAADLYENIK-A--YTVLDVREPFELIFGSIANSI--------NIPISELREKWKI--------------------- 51 (108)
T ss_dssp CEECHHHHHHTTT-T--CEEEECSCHHHHTTCBCTTCE--------ECCHHHHHHHGGG---------------------
T ss_pred cEeCHHHHHHHHc-C--CEEEECCCHHHHhcCcCCCCE--------EcCHHHHHHHHHh---------------------
Confidence 5799999999984 2 999999999999999999999 9998766543322
Q ss_pred ccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCcccccc
Q 012218 350 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (468)
Q Consensus 350 ~l~kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv~~~~~ 404 (468)
++++++||+||++|.||..+++.|+++|| +|++|+||+.+|+++|+|+++..+
T Consensus 52 -l~~~~~ivvyC~~G~rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~~~~~~~~~~ 104 (108)
T 3gk5_A 52 -LERDKKYAVICAHGNRSAAAVEFLSQLGL-NIVDVEGGIQSWIEEGYPVVLEHH 104 (108)
T ss_dssp -SCTTSCEEEECSSSHHHHHHHHHHHTTTC-CEEEETTHHHHHHHTTCCCBCC--
T ss_pred -CCCCCeEEEEcCCCcHHHHHHHHHHHcCC-CEEEEcCcHHHHHHcCCCCCCCCC
Confidence 37889999999999999999999999999 999999999999999999987643
No 5
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=99.86 E-value=4.9e-22 Score=175.33 Aligned_cols=115 Identities=18% Similarity=0.200 Sum_probs=94.7
Q ss_pred cccCHHHHHHHHhC-CCCcEEEEcCChhhHhhcCCCCCcccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhh
Q 012218 270 GDLSPKSTLELLRG-KENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNL 348 (468)
Q Consensus 270 ~~ISp~el~elL~~-~~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l~alGI~~L 348 (468)
..|+++++.+++++ +++.+|||||++.||..||||||+ |+|+.++.... .+++..+.+.+...
T Consensus 23 ~~is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi--------nip~~~l~~~~---~~~~~~~~~~~~~~----- 86 (139)
T 3d1p_A 23 QSYSFEDMKRIVGKHDPNVVLVDVREPSEYSIVHIPASI--------NVPYRSHPDAF---ALDPLEFEKQIGIP----- 86 (139)
T ss_dssp EECCHHHHHHHHHHTCTTEEEEECSCHHHHHHCCCTTCE--------ECCTTTCTTGG---GSCHHHHHHHHSSC-----
T ss_pred ceecHHHHHHHHhCCCCCeEEEECcCHHHHhCCCCCCcE--------EcCHHHhhhhc---cCCHHHHHHHHhcc-----
Confidence 47999999999864 367999999999999999999999 99988775432 23334444333211
Q ss_pred cccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCccc
Q 012218 349 KIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKE 401 (468)
Q Consensus 349 k~l~kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv~~ 401 (468)
.++++++||+||++|.||..+++.|+++||++|++|+||+.+|.++|+|+.+
T Consensus 87 -~~~~~~~ivvyC~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~ 138 (139)
T 3d1p_A 87 -KPDSAKELIFYCASGKRGGEAQKVASSHGYSNTSLYPGSMNDWVSHGGDKLD 138 (139)
T ss_dssp -CCCTTSEEEEECSSSHHHHHHHHHHHTTTCCSEEECTTHHHHHHHTTGGGCC
T ss_pred -CCCCCCeEEEECCCCchHHHHHHHHHHcCCCCeEEeCCcHHHHHHcCCCCCC
Confidence 2378899999999999999999999999999999999999999999999864
No 6
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=99.86 E-value=5.1e-22 Score=168.31 Aligned_cols=101 Identities=21% Similarity=0.315 Sum_probs=88.8
Q ss_pred cccCHHHHHHHHhCCCCcEEEEcCChhhHhhcCCCCCcccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhc
Q 012218 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (468)
Q Consensus 270 ~~ISp~el~elL~~~~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l~alGI~~Lk 349 (468)
..|+++++.++++ +++.+|||||++.||..||||||+ |+|+.++...+.+
T Consensus 5 ~~i~~~~l~~~~~-~~~~~liDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~~--------------------- 54 (108)
T 1gmx_A 5 ECINVADAHQKLQ-EKEAVLVDIRDPQSFAMGHAVQAF--------HLTNDTLGAFMRD--------------------- 54 (108)
T ss_dssp EEECHHHHHHHHH-TTCCEEEECSCHHHHHHCEETTCE--------ECCHHHHHHHHHH---------------------
T ss_pred cccCHHHHHHHHh-CCCCEEEEcCCHHHHHhCCCccCE--------eCCHHHHHHHHHh---------------------
Confidence 4699999999986 456899999999999999999999 9998665443221
Q ss_pred ccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCcccc
Q 012218 350 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKEL 402 (468)
Q Consensus 350 ~l~kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv~~~ 402 (468)
++++++||+||++|.||..+++.|++.||++|++|+||+.+|.++ +|++..
T Consensus 55 -l~~~~~ivvyc~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~-~p~~~~ 105 (108)
T 1gmx_A 55 -NDFDTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQ-FPAEVA 105 (108)
T ss_dssp -SCTTSCEEEECSSSSHHHHHHHHHHHHTCSSEEEETTHHHHHHHH-CGGGEE
T ss_pred -cCCCCCEEEEcCCCchHHHHHHHHHHcCCceEEEecCCHHHHHHh-CCcccc
Confidence 378899999999999999999999999999999999999999999 999764
No 7
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=99.85 E-value=1.1e-21 Score=174.12 Aligned_cols=107 Identities=22% Similarity=0.361 Sum_probs=92.8
Q ss_pred cccCHHHHHHHHhCCCCcEEEEcCChhhHhh-cC--CCCCcccccccccccCcccccchhhhhhcCchhhHHHHHHHHHh
Q 012218 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRER-DG--IPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIR 346 (468)
Q Consensus 270 ~~ISp~el~elL~~~~~avLIDVRs~~Ey~~-gH--IPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l~alGI~ 346 (468)
..|+++++.++++++++.+|||||++.||.. || ||||+ |+|+.++.....
T Consensus 23 ~~is~~el~~~l~~~~~~~liDVR~~~E~~~~gh~~IpgAi--------nip~~~l~~~~~------------------- 75 (137)
T 1qxn_A 23 VMLSPKDAYKLLQENPDITLIDVRDPDELKAMGKPDVKNYK--------HMSRGKLEPLLA------------------- 75 (137)
T ss_dssp EEECHHHHHHHHHHCTTSEEEECCCHHHHHHTCEECCSSEE--------ECCTTTSHHHHH-------------------
T ss_pred cccCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCcCCCCCE--------EcchHHhhhHHh-------------------
Confidence 4799999999996356799999999999999 99 99999 999877643100
Q ss_pred hhcccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCcccccc
Q 012218 347 NLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (468)
Q Consensus 347 ~Lk~l~kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv~~~~~ 404 (468)
+..++++++||+||++|.||..+++.|++.||++|++|+||+.+|.++|+|+++..+
T Consensus 76 -~~~l~~~~~ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 132 (137)
T 1qxn_A 76 -KSGLDPEKPVVVFCKTAARAALAGKTLREYGFKTIYNSEGGMDKWLEEGLPSLDRSH 132 (137)
T ss_dssp -HHCCCTTSCEEEECCSSSCHHHHHHHHHHHTCSCEEEESSCHHHHHHTTCCEECCCC
T ss_pred -hccCCCCCeEEEEcCCCcHHHHHHHHHHHcCCcceEEEcCcHHHHHHCCCCcccccc
Confidence 112478999999999999999999999999999999999999999999999998754
No 8
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=99.85 E-value=2e-21 Score=170.84 Aligned_cols=113 Identities=22% Similarity=0.313 Sum_probs=90.6
Q ss_pred cccCHHHHHHHHhC-CCCcEEEEcCChhhHhh-cCCCCCcccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhh
Q 012218 270 GDLSPKSTLELLRG-KENAVLIDVRHEDLRER-DGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRN 347 (468)
Q Consensus 270 ~~ISp~el~elL~~-~~~avLIDVRs~~Ey~~-gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l~alGI~~ 347 (468)
..|+++++.+++++ +++.+|||||++.||.. ||||||+ |+|+.++....... .+..
T Consensus 22 ~~is~~~l~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~--------~ip~~~l~~~~~~~--~~~~------------ 79 (139)
T 2hhg_A 22 ETLTTADAIALHKSGASDVVIVDIRDPREIERDGKIPGSF--------SCTRGMLEFWIDPQ--SPYA------------ 79 (139)
T ss_dssp EEECHHHHHHHHHTTCTTEEEEECSCHHHHHHHCCCTTCE--------ECCGGGHHHHHCTT--STTC------------
T ss_pred CccCHHHHHHHHhccCCCeEEEECCCHHHHHhCCCCCCeE--------ECChHHHHHhcCcc--chhh------------
Confidence 47999999999963 45799999999999999 9999999 99987765432210 0000
Q ss_pred hcccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCcccccc
Q 012218 348 LKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (468)
Q Consensus 348 Lk~l~kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv~~~~~ 404 (468)
+..++++++||+||++|.||..+++.|+.+||++|++|+||+.+|.++|+|++.+.+
T Consensus 80 ~~~~~~~~~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 136 (139)
T 2hhg_A 80 KPIFQEDKKFVFYCAGGLRSALAAKTAQDMGLKPVAHIEGGFGAWRDAGGPIEAWAP 136 (139)
T ss_dssp CGGGGSSSEEEEECSSSHHHHHHHHHHHHHTCCSEEEETTHHHHHHHTTCCCC----
T ss_pred hccCCCCCeEEEECCCChHHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCCeecCCC
Confidence 011368899999999999999999999999999999999999999999999987643
No 9
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=99.85 E-value=1e-21 Score=166.59 Aligned_cols=100 Identities=14% Similarity=0.179 Sum_probs=79.3
Q ss_pred HHHHHHhC-CCCcEEEEcCChhhHhhcCCCCCcccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhcccCCC
Q 012218 276 STLELLRG-KENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDR 354 (468)
Q Consensus 276 el~elL~~-~~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l~alGI~~Lk~l~kd 354 (468)
|+.+++++ +++++|||||++.||..||||||+ |+|+.++...... .++++
T Consensus 2 el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi--------~ip~~~l~~~~~~---------------------~l~~~ 52 (106)
T 3hix_A 2 VLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAM--------AMPIEDLVDRASS---------------------SLEKS 52 (106)
T ss_dssp -----------CCEEEECSCHHHHHTCEETTCE--------ECCGGGHHHHHHH---------------------HSCTT
T ss_pred hHHHHHHcCCCCeEEEECCCHHHHhcCcCCCCE--------eCCHHHHHHHHHh---------------------cCCCC
Confidence 56677743 346999999999999999999999 9998776543211 13788
Q ss_pred ceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCcccccc
Q 012218 355 SKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (468)
Q Consensus 355 ~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv~~~~~ 404 (468)
++||+||.+|.||..+++.|+.+||++|++|+||+.+|+++|+|+.+..+
T Consensus 53 ~~ivvyc~~g~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~~~~~~~~ 102 (106)
T 3hix_A 53 RDIYVYGAGDEQTSQAVNLLRSAGFEHVSELKGGLAAWKAIGGPTELEHH 102 (106)
T ss_dssp SCEEEECSSHHHHHHHHHHHHHTTCSCEEECTTHHHHHHHTTCCEEECCE
T ss_pred CeEEEEECCCChHHHHHHHHHHcCCcCEEEecCCHHHHHHCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999999988643
No 10
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=99.84 E-value=1.9e-21 Score=173.75 Aligned_cols=104 Identities=13% Similarity=0.180 Sum_probs=90.6
Q ss_pred cCHHHHHHHHhCC-CCcEEEEcCChhhHhhcCCCCCcccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhcc
Q 012218 272 LSPKSTLELLRGK-ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKI 350 (468)
Q Consensus 272 ISp~el~elL~~~-~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l~alGI~~Lk~ 350 (468)
|+++++.++++++ ++++|||||++.||..||||||+ |+|+.++...... .
T Consensus 2 Is~~el~~~l~~~~~~~~liDvR~~~e~~~ghIpgAi--------~ip~~~l~~~~~~---------------------~ 52 (141)
T 3ilm_A 2 SDAHVLKSRLEWGEPAFTILDVRDRSTYNDGHIMGAM--------AMPIEDLVDRASS---------------------S 52 (141)
T ss_dssp CCHHHHHHHHHHSCSCEEEEECSCHHHHHHCEETTCE--------ECCGGGHHHHHHT---------------------T
T ss_pred CCHHHHHHHHhcCCCCEEEEECCCHHHHhCCCCCCCE--------EcCHHHHHHHHHh---------------------c
Confidence 8999999998644 46999999999999999999999 9998766543211 1
Q ss_pred cCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCcccccc
Q 012218 351 VQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (468)
Q Consensus 351 l~kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv~~~~~ 404 (468)
++++++||+||.+|.||..+++.|+..||++|++|+||+.+|.++|+|++...+
T Consensus 53 l~~~~~ivvyC~~g~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 106 (141)
T 3ilm_A 53 LEKSRDIYVYGAGDEQTSQAVNLLRSAGFEHVSELKGGLAAWKAIGGPTEGIIE 106 (141)
T ss_dssp SCTTSEEEEECSSHHHHHHHHHHHHHTTCCSEEECTTHHHHHHHTTCCEEEEC-
T ss_pred CCCCCeEEEEECCChHHHHHHHHHHHcCCCCEEEecCHHHHHHHCCCCcccCCC
Confidence 378899999999999999999999999999999999999999999999998753
No 11
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=99.83 E-value=8.2e-21 Score=170.06 Aligned_cols=105 Identities=17% Similarity=0.203 Sum_probs=91.2
Q ss_pred cccCHHHHHHHHhCC-CCcEEEEcCChhhHhhcCCCCCcccccccccccCcccccc-hhhhhhcCchhhHHHHHHHHHhh
Q 012218 270 GDLSPKSTLELLRGK-ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGG-SVKKLLRGGRELDDTLTAAVIRN 347 (468)
Q Consensus 270 ~~ISp~el~elL~~~-~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~-~l~~ll~~~~~L~~~l~alGI~~ 347 (468)
..|+++++.++++++ ++++|||||++.||..||||||+ |+|+.++.. .+.
T Consensus 16 ~~is~~el~~~l~~~~~~~~liDvR~~~ey~~ghIpgAi--------nip~~~l~~~~~~-------------------- 67 (144)
T 3nhv_A 16 YETDIADLSIDIKKGYEGIIVVDVRDAEAYKECHIPTAI--------SIPGNKINEDTTK-------------------- 67 (144)
T ss_dssp TEEEHHHHHHHHHTTCCSEEEEECSCHHHHHHCBCTTCE--------ECCGGGCSTTTTT--------------------
T ss_pred cccCHHHHHHHHHcCCCCEEEEECcCHHHHhcCCCCCCE--------ECCHHHHhHHHHh--------------------
Confidence 369999999999754 47999999999999999999999 999877653 211
Q ss_pred hcccCCCceEEEEeCCC--chHHHHHHHHHHccCCCEEEecchHHHHHHcCCCccccccc
Q 012218 348 LKIVQDRSKVIVMDADG--TRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKSE 405 (468)
Q Consensus 348 Lk~l~kd~~IVVyC~sG--~RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv~~~~~~ 405 (468)
.++++++||+||++| .||..+++.|+.+|| +|++|+||+.+|+++|+|++...+.
T Consensus 68 --~l~~~~~ivvyC~~g~~~rs~~aa~~L~~~G~-~v~~l~GG~~~W~~~g~pv~~~~~~ 124 (144)
T 3nhv_A 68 --RLSKEKVIITYCWGPACNGATKAAAKFAQLGF-RVKELIGGIEYWRKENGEVEGTLGA 124 (144)
T ss_dssp --TCCTTSEEEEECSCTTCCHHHHHHHHHHHTTC-EEEEEESHHHHHHHTTCCCBSSSGG
T ss_pred --hCCCCCeEEEEECCCCccHHHHHHHHHHHCCC-eEEEeCCcHHHHHHCCCCccCCCCC
Confidence 237889999999999 699999999999999 6999999999999999999987553
No 12
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=99.83 E-value=5.7e-21 Score=167.34 Aligned_cols=111 Identities=21% Similarity=0.250 Sum_probs=90.5
Q ss_pred cccCHHHHHHHHhCCCCcEEEEcCChhhHhhcCCCCCcccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhc
Q 012218 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (468)
Q Consensus 270 ~~ISp~el~elL~~~~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l~alGI~~Lk 349 (468)
..|+++++.++++ ++++|||||++.||..||||||+ |+|+..+.. ...+++++++++.+ +
T Consensus 18 ~~is~~e~~~~l~--~~~~lIDvR~~~e~~~ghIpgAi--------nip~~~~~~--~~~~~~~~~~~~~~--------~ 77 (129)
T 1tq1_A 18 SSVSVTVAHDLLL--AGHRYLDVRTPEEFSQGHACGAI--------NVPYMNRGA--SGMSKNTDFLEQVS--------S 77 (129)
T ss_dssp EEEEHHHHHHHHH--HTCCEEEESCHHHHHHCCBTTBE--------ECCSCCCST--TTCCCTTTHHHHHT--------T
T ss_pred cccCHHHHHHHhc--CCCEEEECCCHHHHhcCCCCCcE--------ECcHhhccc--ccccCCHHHHHHHH--------h
Confidence 4799999999985 46899999999999999999999 888854432 12223333333211 2
Q ss_pred ccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCcc
Q 012218 350 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIK 400 (468)
Q Consensus 350 ~l~kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv~ 400 (468)
.++++++||+||++|.||..+++.|+++||++|++|+||+.+|..+|+|++
T Consensus 78 ~l~~~~~ivvyC~~G~rs~~aa~~L~~~G~~~v~~l~GG~~~W~~~g~p~~ 128 (129)
T 1tq1_A 78 HFGQSDNIIVGCQSGGRSIKATTDLLHAGFTGVKDIVGGYSAWAKNGLPTK 128 (129)
T ss_dssp TCCTTSSEEEEESSCSHHHHHHHHHHHHHCCSEEEEECCHHHHHHHTCCCC
T ss_pred hCCCCCeEEEECCCCcHHHHHHHHHHHcCCCCeEEeCCcHHHHHhCCCCCC
Confidence 247889999999999999999999999999999999999999999999986
No 13
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=99.82 E-value=8.7e-21 Score=165.11 Aligned_cols=101 Identities=17% Similarity=0.282 Sum_probs=88.2
Q ss_pred ccCHHHHHHHHhCC-CCcEEEEcCChhhH-hhcCCCCCcccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhh
Q 012218 271 DLSPKSTLELLRGK-ENAVLIDVRHEDLR-ERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNL 348 (468)
Q Consensus 271 ~ISp~el~elL~~~-~~avLIDVRs~~Ey-~~gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l~alGI~~L 348 (468)
.|+++++.++++++ ++++|||||++.|| ..||||||+ |+|+.++...+..
T Consensus 16 ~is~~el~~~l~~~~~~~~liDvR~~~e~~~~ghIpgA~--------nip~~~l~~~~~~-------------------- 67 (124)
T 3flh_A 16 YIDHHTVLADMQNATGKYVVLDVRNAPAQVKKDQIKGAI--------AMPAKDLATRIGE-------------------- 67 (124)
T ss_dssp EECHHHHHHHHHHTCCCEEEEECCCSCHHHHCCEETTCE--------ECCHHHHHHHGGG--------------------
T ss_pred eecHHHHHHHHHcCCCCEEEEECCCHHHHHhcCcCCCCE--------ECCHHHHHHHHhc--------------------
Confidence 69999999998654 35999999999998 999999999 9998766543322
Q ss_pred cccCCCceEEEEeCCCch--HHHHHHHHHHccCCCEEEecchHHHHHHcCCCcccc
Q 012218 349 KIVQDRSKVIVMDADGTR--SKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKEL 402 (468)
Q Consensus 349 k~l~kd~~IVVyC~sG~R--S~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv~~~ 402 (468)
++++++||+||++|.| |..+++.|++.||+ |++|+||+.+|+++|+|+.+.
T Consensus 68 --l~~~~~ivvyC~~g~r~~s~~a~~~L~~~G~~-v~~l~GG~~~W~~~~~p~~~~ 120 (124)
T 3flh_A 68 --LDPAKTYVVYDWTGGTTLGKTALLVLLSAGFE-AYELAGALEGWKGMQLPLEHH 120 (124)
T ss_dssp --SCTTSEEEEECSSSSCSHHHHHHHHHHHHTCE-EEEETTHHHHHHHTTCCEEC-
T ss_pred --CCCCCeEEEEeCCCCchHHHHHHHHHHHcCCe-EEEeCCcHHHHHHcCCCCCcc
Confidence 3789999999999998 89999999999996 999999999999999998775
No 14
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.82 E-value=9.8e-21 Score=183.68 Aligned_cols=115 Identities=15% Similarity=0.111 Sum_probs=97.4
Q ss_pred ccCHHHHHHHHhCCCCcEEEEcCChhhHh--------hcCCCCCcccccccccccCcccccchhhhhhcCchhhHHHHHH
Q 012218 271 DLSPKSTLELLRGKENAVLIDVRHEDLRE--------RDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTA 342 (468)
Q Consensus 271 ~ISp~el~elL~~~~~avLIDVRs~~Ey~--------~gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l~a 342 (468)
.|+++++.+++. +++.+|||||++.||. .||||||+ |+|+.++.......... +++++.+..
T Consensus 148 ~i~~~~l~~~l~-~~~~~liDvR~~~e~~g~~~~~~~~ghIpgA~--------~ip~~~~~~~~~~~~~~-~~l~~~~~~ 217 (271)
T 1e0c_A 148 TASRDYLLGRLG-AADLAIWDARSPQEYRGEKVLAAKGGHIPGAV--------NFEWTAAMDPSRALRIR-TDIAGRLEE 217 (271)
T ss_dssp BCCHHHHHHHTT-CTTEEEEECSCHHHHTTSSCCSSSCSBCTTCE--------ECCGGGGEEGGGTTEEC-TTHHHHHHH
T ss_pred cccHHHHHHHhc-CCCcEEEEcCChhhcCCccCCCCcCCcCCCce--------eccHHHhCCCCCCCCCH-HHHHHHHHH
Confidence 468999999984 5679999999999999 99999999 99988776543333333 666666666
Q ss_pred HHHhhhcccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHc-CCCccc
Q 012218 343 AVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKE-GLRIKE 401 (468)
Q Consensus 343 lGI~~Lk~l~kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~a-GLPv~~ 401 (468)
+++ +++++||+||++|.||..+++.|+.+||++|++|+||+.+|.+. |+|+++
T Consensus 218 ~~~------~~~~~ivvyC~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~~~~~pv~~ 271 (271)
T 1e0c_A 218 LGI------TPDKEIVTHCQTHHRSGLTYLIAKALGYPRVKGYAGSWGEWGNHPDTPVEL 271 (271)
T ss_dssp TTC------CTTSEEEEECSSSSHHHHHHHHHHHTTCSCEEECSSHHHHHTTCTTCCCBC
T ss_pred cCC------CCCCCEEEECCchHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCCcC
Confidence 565 88999999999999999999999999999999999999999998 999863
No 15
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=99.81 E-value=4.4e-20 Score=179.09 Aligned_cols=120 Identities=17% Similarity=0.209 Sum_probs=104.3
Q ss_pred cccCHHHHHHHHhCCCCcEEEEcCChhhHhhcCCCCCcccccccccccCcccccch---hhhhhcCchhhHHHHHHHHHh
Q 012218 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGS---VKKLLRGGRELDDTLTAAVIR 346 (468)
Q Consensus 270 ~~ISp~el~elL~~~~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~~---l~~ll~~~~~L~~~l~alGI~ 346 (468)
..|+++++.++++ +++++|||||++.||..+|||||+ |+|+..+... ...++++++.+.+.+..+|+
T Consensus 9 ~~is~~~l~~~l~-~~~~~iiDvR~~~ey~~ghIpgA~--------~ip~~~l~~~~~~~~~~~~~~~~~~~~~~~~gi- 78 (271)
T 1e0c_A 9 LVIEPADLQARLS-APELILVDLTSAARYAEGHIPGAR--------FVDPKRTQLGQPPAPGLQPPREQLESLFGELGH- 78 (271)
T ss_dssp SEECHHHHHTTTT-CTTEEEEECSCHHHHHHCBSTTCE--------ECCGGGGSCCCTTCTTSCCCHHHHHHHHHHHTC-
T ss_pred ceeeHHHHHHhcc-CCCeEEEEcCCcchhhhCcCCCCE--------ECCHHHhccCCCCCCCCCCCHHHHHHHHHHcCC-
Confidence 4799999999984 567999999999999999999999 8888766432 34556777778888887777
Q ss_pred hhcccCCCceEEEEeCCCc-hHHHHHHHHHHccCCCEEEecchHHHHHHcCCCcccccc
Q 012218 347 NLKIVQDRSKVIVMDADGT-RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (468)
Q Consensus 347 ~Lk~l~kd~~IVVyC~sG~-RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv~~~~~ 404 (468)
+++++|||||++|. ||.++++.|+.+||++|++|+||+.+|+++|+|++...+
T Consensus 79 -----~~~~~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~L~GG~~~w~~~g~p~~~~~~ 132 (271)
T 1e0c_A 79 -----RPEAVYVVYDDEGGGWAGRFIWLLDVIGQQRYHYLNGGLTAWLAEDRPLSRELP 132 (271)
T ss_dssp -----CTTCEEEEECSSSSHHHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCCCC
T ss_pred -----CCCCeEEEEcCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHcCCCccCCCC
Confidence 78999999999998 999999999999999999999999999999999987644
No 16
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=99.81 E-value=6.4e-21 Score=157.92 Aligned_cols=92 Identities=21% Similarity=0.222 Sum_probs=76.0
Q ss_pred ccCHHHHHHHHhCCCCcEEEEcCChhhHhhcCCCCCcccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhcc
Q 012218 271 DLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKI 350 (468)
Q Consensus 271 ~ISp~el~elL~~~~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l~alGI~~Lk~ 350 (468)
.|+++++.+++++ +.+|||||++.||..+|||||+ |+|+.++...+. .
T Consensus 3 ~is~~~l~~~~~~--~~~liDvR~~~e~~~ghi~gAi--------~ip~~~l~~~~~----------------------~ 50 (94)
T 1wv9_A 3 KVRPEELPALLEE--GVLVVDVRPADRRSTPLPFAAE--------WVPLEKIQKGEH----------------------G 50 (94)
T ss_dssp EECGGGHHHHHHT--TCEEEECCCC--CCSCCSSCCE--------ECCHHHHTTTCC----------------------C
T ss_pred cCCHHHHHHHHHC--CCEEEECCCHHHHhcccCCCCE--------ECCHHHHHHHHH----------------------h
Confidence 5899999999863 7899999999999999999999 999876654322 2
Q ss_pred cCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcC
Q 012218 351 VQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEG 396 (468)
Q Consensus 351 l~kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~aG 396 (468)
+++ ++||+||++|.||..+++.|+.+||+ |++|+||+.+|.++|
T Consensus 51 l~~-~~ivvyC~~g~rs~~a~~~L~~~G~~-v~~l~GG~~~W~~~G 94 (94)
T 1wv9_A 51 LPR-RPLLLVCEKGLLSQVAALYLEAEGYE-AMSLEGGLQALTQGK 94 (94)
T ss_dssp CCS-SCEEEECSSSHHHHHHHHHHHHHTCC-EEEETTGGGCC----
T ss_pred CCC-CCEEEEcCCCChHHHHHHHHHHcCCc-EEEEcccHHHHHhCc
Confidence 367 89999999999999999999999998 999999999998865
No 17
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=99.81 E-value=4.4e-20 Score=158.88 Aligned_cols=116 Identities=17% Similarity=0.155 Sum_probs=86.9
Q ss_pred ccCHHHHHHHHhCCCCcEEEEcCChhhHhhcCCCCCcccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhcc
Q 012218 271 DLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKI 350 (468)
Q Consensus 271 ~ISp~el~elL~~~~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l~alGI~~Lk~ 350 (468)
+|+++++.++++++++++|||||++.||..||||||+ |+|+.++.....+.+ ..+.+.+.... .-..
T Consensus 2 ~is~~el~~~l~~~~~~~liDvR~~~e~~~ghIpgA~--------~ip~~~~~~~~~~~~---~~~~~~l~~~~--~~~~ 68 (127)
T 3i2v_A 2 RVSVTDYKRLLDSGAFHLLLDVRPQVEVDICRLPHAL--------HIPLKHLERRDAESL---KLLKEAIWEEK--QGTQ 68 (127)
T ss_dssp EECHHHHHHHHHHTCCCEEEECSCHHHHHHCCCTTSE--------ECCHHHHHTTCHHHH---HHHHHHHHHHH--TTC-
T ss_pred CCCHHHHHHHHhCCCCeEEEECCCHHHhhheecCCce--------eCChHHHhhhhhhhH---HHHHHHHhhhc--cccc
Confidence 5899999999975557999999999999999999999 999877765433221 01111111100 0001
Q ss_pred cCCCceEEEEeCCCchHHHHHHHHHHc------cCCCEEEecchHHHHHHcCCCc
Q 012218 351 VQDRSKVIVMDADGTRSKGIARSLRKL------GVMRAFLVQGGFQSWVKEGLRI 399 (468)
Q Consensus 351 l~kd~~IVVyC~sG~RS~~AA~~L~~~------Gf~nV~vLdGG~~aW~~aGLPv 399 (468)
.+++++||+||++|.||..+++.|+++ ||.+|++|+|||.+|.++..|.
T Consensus 69 ~~~~~~ivv~C~~G~rs~~a~~~L~~~gg~~~~G~~~v~~l~GG~~~W~~~~~~~ 123 (127)
T 3i2v_A 69 EGAAVPIYVICKLGNDSQKAVKILQSLSAAQELDPLTVRDVVGGLMAWAAKIDGT 123 (127)
T ss_dssp --CCEEEEEECSSSSHHHHHHHHHHHHHHTTSSSCEEEEEETTHHHHHHHHTCTT
T ss_pred CCCCCeEEEEcCCCCcHHHHHHHHHHhhccccCCCceEEEecCCHHHHHHhcCCC
Confidence 145679999999999999999999999 6889999999999999976654
No 18
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=99.81 E-value=1.9e-20 Score=167.50 Aligned_cols=117 Identities=29% Similarity=0.419 Sum_probs=88.4
Q ss_pred CCcccCHHHHHHHHhCCCCcEEEEcCChhhHhh-cCC------CCCcccccccccccCcccccchhhhhhcCchh---hH
Q 012218 268 YSGDLSPKSTLELLRGKENAVLIDVRHEDLRER-DGI------PDLRRGARFRYASVYLPEVGGSVKKLLRGGRE---LD 337 (468)
Q Consensus 268 y~~~ISp~el~elL~~~~~avLIDVRs~~Ey~~-gHI------PGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~---L~ 337 (468)
|.+.|+++++.++++++++++|||||++.||.. ||| |||+ |+|+.++... .++.+ +.
T Consensus 3 ~~~~is~~el~~~l~~~~~~~liDVR~~~e~~~~ghi~~~g~~pgAv--------~ip~~~~~~~-----~~~~~~~~l~ 69 (148)
T 2fsx_A 3 YAGDITPLQAWEMLSDNPRAVLVDVRCEAEWRFVGVPDLSSLGREVV--------YVEWATSDGT-----HNDNFLAELR 69 (148)
T ss_dssp CSEEECHHHHHHHHHHCTTCEEEECSCHHHHHHTCEECCGGGTCCCE--------ECCSBCTTSC-----BCTTHHHHHH
T ss_pred ccccCCHHHHHHHHhcCCCeEEEECCCHHHHHhcCCCccccCCCCcE--------Eeeeeccccc-----cCHHHHHHHH
Confidence 456799999999986446899999999999997 999 9999 8888652110 01111 22
Q ss_pred HHHHHHHHhhhcccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchH------------HHHHHcCCCccccc
Q 012218 338 DTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGF------------QSWVKEGLRIKELK 403 (468)
Q Consensus 338 ~~l~alGI~~Lk~l~kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~------------~aW~~aGLPv~~~~ 403 (468)
+.+...++ +++++|||||++|.||..+++.|+.+||++|++|+||+ .+|+++|+|++...
T Consensus 70 ~~l~~~~~------~~~~~ivvyC~~G~rS~~aa~~L~~~G~~~v~~l~GG~~~w~~~~g~~~~~~W~~~glp~~~~~ 141 (148)
T 2fsx_A 70 DRIPADAD------QHERPVIFLCRSGNRSIGAAEVATEAGITPAYNVLDGFEGHLDAEGHRGATGWRAVGLPWRQGR 141 (148)
T ss_dssp HHCC-------------CCEEEECSSSSTHHHHHHHHHHTTCCSEEEETTTTTCCCCTTSCCCSSSTTTTTCSEECC-
T ss_pred HHHhhccC------CCCCEEEEEcCCChhHHHHHHHHHHcCCcceEEEcCChhhhhhhccccccccHHHcCCCCCccc
Confidence 21212233 78899999999999999999999999999999999999 78999999998753
No 19
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.80 E-value=5.9e-20 Score=190.30 Aligned_cols=209 Identities=15% Similarity=0.141 Sum_probs=153.2
Q ss_pred cchhHHHHHHHHHHhhhhcccCcceE---------EEeeccCCCCCCCchHHHhhhhhHhhhhhcccccchHHHHHHHHH
Q 012218 159 TVAAVDVLRNTIVALEESMTNGASFV---------VYYYGTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVSVAIE 229 (468)
Q Consensus 159 ~~~~~d~l~~~~~~~~~~~~~~~~~~---------~~~~G~~~~~l~p~~~~~~~~~e~~~~~v~~p~g~~~~q~~~~ie 229 (468)
+-|+.+||++.+..-+-.++|.|+.. .|.-||++..++-++.. +. +.. .+ .++
T Consensus 4 ~~is~~~L~~~l~~~~~~ilD~r~~~~~~~~~~~~~y~~gHIPgAv~~~~~~-l~------------lp~-~~----~f~ 65 (423)
T 2wlr_A 4 AELAKPLTLDQLQQQNGKAIDTRPSAFYNGWPQTLNGPSGHELAALNLSASW-LD------------KMS-TE----QLN 65 (423)
T ss_dssp CCCCSCBCHHHHHHTTCEEEECSCHHHHHTCCSSTTCCCSBCTTCEECCGGG-GG------------GCC-HH----HHH
T ss_pred cccCHHHHHHHhCCCCeEEEECCCcccccccccccccccCCCCCCccCCHHH-hc------------CCC-HH----HHH
Confidence 34677888888865556788998765 35578999888776642 21 111 11 222
Q ss_pred HHHHhcCCCCCCCcchHHHHHhhhHHHHHHHHHHHhCC----------------------CCcccCHHHHHHHHhC----
Q 012218 230 GLERSLGFDPNDPIVPFVVFLGTSATLWIFYWWWTYGG----------------------YSGDLSPKSTLELLRG---- 283 (468)
Q Consensus 230 ~le~~lgf~~~~PvL~~~~~vg~~aal~l~~~l~~~~~----------------------y~~~ISp~el~elL~~---- 283 (468)
..-..+|+.++++++++..- + .++ .+++.+ +.-+ +...++++++.++++.
T Consensus 66 ~~~~~lgi~~~~~vVvy~~~-~-~a~-r~~w~l-~~~G~~~V~vl~Gg~~~~g~~~~~~~~~~~i~~~~l~~~~~~~~~~ 141 (423)
T 2wlr_A 66 AWIKQHNLKTDAPVALYGND-K-DVD-AVKTRL-QKAGLTHISILSDALSEPSRLQKLPHFEQLVYPQWLHDLQQGKEVT 141 (423)
T ss_dssp HHHHHTTCCTTSCEEEESCH-H-HHH-HHHHHH-HHTTCCCEEEBTTTTSCGGGCBCCTTGGGEECHHHHHHHHTTCCCT
T ss_pred HHHHHcCCCCCCeEEEECCC-C-CHH-HHHHHH-HHcCCceeEeccchhhcCCCcccCCCCCcccCHHHHHHHhhccccc
Confidence 33344788888999876433 2 222 222222 1111 1135788999988853
Q ss_pred ---CCCcEEEEcC--ChhhHhhcCCCCCcccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhcccCCCceEE
Q 012218 284 ---KENAVLIDVR--HEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDRSKVI 358 (468)
Q Consensus 284 ---~~~avLIDVR--s~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l~alGI~~Lk~l~kd~~IV 358 (468)
+++.+|||+| ++.||..||||||+ |+|+.++.......+++++.+.+.+.+.|+ +++++||
T Consensus 142 ~~~~~~~~liDvR~~~~~e~~~ghIpgA~--------nip~~~~~~~~~~~~~~~~~l~~~~~~~gi------~~~~~iv 207 (423)
T 2wlr_A 142 AKPAGDWKVIEAAWGAPKLYLISHIPGAD--------YIDTNEVESEPLWNKVSDEQLKAMLAKHGI------RHDTTVI 207 (423)
T ss_dssp TCCSSCEEEEEEESSSCSHHHHCBCTTCE--------EEEGGGTEETTTTEECCHHHHHHHHHHTTC------CTTSEEE
T ss_pred cccCCCeEEEEecCCCchhhccCcCCCcE--------EcCHHHhccCCCCCCCCHHHHHHHHHHcCC------CCCCeEE
Confidence 3478999999 99999999999999 899877754333567778888888877777 7899999
Q ss_pred EEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCccccc
Q 012218 359 VMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELK 403 (468)
Q Consensus 359 VyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv~~~~ 403 (468)
+||++|.||..+++.|+.+||++|++|+||+.+|..+|+|++++.
T Consensus 208 vyC~~G~~a~~~~~~L~~~G~~~v~~l~Gg~~~W~~~g~pv~~g~ 252 (423)
T 2wlr_A 208 LYGRDVYAAARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERGT 252 (423)
T ss_dssp EECSSHHHHHHHHHHHHHHTCSCEEEETTTHHHHHHTTCCCBCSS
T ss_pred EECCCchHHHHHHHHHHHcCCCCeEEECCCHHHHhhCCCCcccCC
Confidence 999999999999999999999999999999999999999998753
No 20
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=99.80 E-value=7.7e-21 Score=162.17 Aligned_cols=99 Identities=19% Similarity=0.281 Sum_probs=83.7
Q ss_pred ccCHHHHHHHHhCCCCcEEEEcCChhhHhhcCCCCCcccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhcc
Q 012218 271 DLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKI 350 (468)
Q Consensus 271 ~ISp~el~elL~~~~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l~alGI~~Lk~ 350 (468)
.|+++++ ++++++|||||++.||..||||||+ |+|+.++...+. ..+
T Consensus 6 ~is~~el-----~~~~~~liDvR~~~e~~~ghIpgAi--------~ip~~~l~~~~~--------------~~~------ 52 (110)
T 2k0z_A 6 AISLEEV-----NFNDFIVVDVRELDEYEELHLPNAT--------LISVNDQEKLAD--------------FLS------ 52 (110)
T ss_dssp EEETTTC-----CGGGSEEEEEECHHHHHHSBCTTEE--------EEETTCHHHHHH--------------HHH------
T ss_pred eeCHHHh-----ccCCeEEEECCCHHHHhcCcCCCCE--------EcCHHHHHHHHH--------------hcc------
Confidence 4666665 2457899999999999999999999 999877654322 112
Q ss_pred cCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCccccc
Q 012218 351 VQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELK 403 (468)
Q Consensus 351 l~kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv~~~~ 403 (468)
++++++||+||++|.||..+++.|+.+||++ ++|+||+.+|.++|+|++.+.
T Consensus 53 ~~~~~~ivvyC~~G~rs~~aa~~L~~~G~~~-~~l~GG~~~W~~~g~p~~~~~ 104 (110)
T 2k0z_A 53 QHKDKKVLLHCRAGRRALDAAKSMHELGYTP-YYLEGNVYDFEKYGFRMVYDD 104 (110)
T ss_dssp SCSSSCEEEECSSSHHHHHHHHHHHHTTCCC-EEEESCGGGTTTTTCCCBCCC
T ss_pred cCCCCEEEEEeCCCchHHHHHHHHHHCCCCE-EEecCCHHHHHHCCCcEecCC
Confidence 2788999999999999999999999999999 999999999999999998753
No 21
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.80 E-value=2.9e-20 Score=183.48 Aligned_cols=117 Identities=15% Similarity=0.095 Sum_probs=97.8
Q ss_pred ccCHHHHHHHHhCCCCcEEEEcCChhhH------------hhcCCCCCcccccccccccCcccccchhhhhhcCchhhHH
Q 012218 271 DLSPKSTLELLRGKENAVLIDVRHEDLR------------ERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDD 338 (468)
Q Consensus 271 ~ISp~el~elL~~~~~avLIDVRs~~Ey------------~~gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~ 338 (468)
.|+++++.++++ +++.+|||||++.|| +.||||||+ |+|+.++.... ..+++++++.+
T Consensus 161 ~i~~~e~~~~~~-~~~~~liDvR~~~e~~G~~~~~~~~~~~~ghIpgA~--------nip~~~l~~~~-~~~~~~~~l~~ 230 (296)
T 1rhs_A 161 LKTYEQVLENLE-SKRFQLVDSRAQGRYLGTQPEPDAVGLDSGHIRGSV--------NMPFMNFLTED-GFEKSPEELRA 230 (296)
T ss_dssp EECHHHHHHHHH-HCCSEEEECSCHHHHHTSSCCSSSSSCCCCEETTCE--------ECCGGGGBCTT-SCBCCHHHHHH
T ss_pred EEcHHHHHHHhc-CCCceEEeCCchhhcccccCCcccCCCcCccCCCCE--------eecHHHhcCCC-CcCCCHHHHHH
Confidence 578999999885 457899999999999 889999999 99988775432 22444555666
Q ss_pred HHHHHHHhhhcccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHH-cCCCccccc
Q 012218 339 TLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVK-EGLRIKELK 403 (468)
Q Consensus 339 ~l~alGI~~Lk~l~kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~-aGLPv~~~~ 403 (468)
.+...++ +++++||+||++|.||..++..|+.+||++|++|+|||.+|.. .++|+++..
T Consensus 231 ~~~~~~~------~~~~~ivv~C~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~~~~ 290 (296)
T 1rhs_A 231 MFEAKKV------DLTKPLIATCRKGVTACHIALAAYLCGKPDVAIYDGSWFEWFHRAPPETWVSQ 290 (296)
T ss_dssp HHHHTTC------CTTSCEEEECSSSSTHHHHHHHHHHTTCCCCEEESSHHHHHHHHSCGGGEEBT
T ss_pred HHHHcCC------CCCCCEEEECCcHHHHHHHHHHHHHcCCCCceeeCCcHHHHhcCCCCCcccCC
Confidence 5554444 7899999999999999999999999999999999999999998 899998753
No 22
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.79 E-value=1.3e-19 Score=176.77 Aligned_cols=120 Identities=16% Similarity=0.210 Sum_probs=102.5
Q ss_pred cccCHHHHHHHHhCCCCcEEEEcC----------ChhhHhhcCCCCCcccccccccccCcccccch---hhhhhcCchhh
Q 012218 270 GDLSPKSTLELLRGKENAVLIDVR----------HEDLRERDGIPDLRRGARFRYASVYLPEVGGS---VKKLLRGGREL 336 (468)
Q Consensus 270 ~~ISp~el~elL~~~~~avLIDVR----------s~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~~---l~~ll~~~~~L 336 (468)
..|+++++.++++ +++++|||+| ++.||..||||||+ |+|+..+... ...++++++.+
T Consensus 4 ~~is~~~l~~~l~-~~~~~iiDvR~~~~~~~~~~~~~e~~~ghIpgAi--------~ip~~~l~~~~~~~~~~~~~~~~~ 74 (280)
T 1urh_A 4 WFVGADWLAEHID-DPEIQIIDARMASPGQEDRNVAQEYLNGHIPGAV--------FFDIEALSDHTSPLPHMLPRPETF 74 (280)
T ss_dssp CEECHHHHHTTTT-CTTEEEEECCCCCSSCTTCCHHHHHHHSBCTTCE--------ECCGGGGSCSSSSSSSCCCCHHHH
T ss_pred ceeeHHHHHHhcC-CCCeEEEEeeccCCcccccchhhhhhhCcCCCCE--------ECCHHHhcCCCCCCCCCCCCHHHH
Confidence 3689999999984 4689999999 78999999999999 8887665432 22456667778
Q ss_pred HHHHHHHHHhhhcccCCCceEEEEeCCCch-HHHHHHHHHHccCCCEEEecchHHHHHHcCCCcccccc
Q 012218 337 DDTLTAAVIRNLKIVQDRSKVIVMDADGTR-SKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (468)
Q Consensus 337 ~~~l~alGI~~Lk~l~kd~~IVVyC~sG~R-S~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv~~~~~ 404 (468)
++.+..+|+ +++++||+||++|.| |.++++.|+.+||++|++|+||+.+|.++|+|+++..+
T Consensus 75 ~~~~~~~gi------~~~~~ivvyc~~g~~~a~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 137 (280)
T 1urh_A 75 AVAMRELGV------NQDKHLIVYDEGNLFSAPRAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAV 137 (280)
T ss_dssp HHHHHHTTC------CTTSEEEEECSSSCSSHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBBSCC
T ss_pred HHHHHHcCC------CCCCeEEEECCCCCccHHHHHHHHHHcCCCCEEEecCCHHHHHHCCCcccCCCC
Confidence 888877777 789999999999998 99999999999999999999999999999999988644
No 23
>1urh_A 3-mercaptopyruvate sulfurtransferase; rhodanese; 2.8A {Escherichia coli} SCOP: c.46.1.2 c.46.1.2
Probab=99.79 E-value=2.5e-20 Score=181.86 Aligned_cols=114 Identities=21% Similarity=0.254 Sum_probs=87.1
Q ss_pred cCHHHHHHHHhCCCCcEEEEcCChhhH-----------hhcCCCCCcccccccccccCcccccchhhhhhcCchhhHHHH
Q 012218 272 LSPKSTLELLRGKENAVLIDVRHEDLR-----------ERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTL 340 (468)
Q Consensus 272 ISp~el~elL~~~~~avLIDVRs~~Ey-----------~~gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l 340 (468)
|+++++.+++. +++.+|||||++.|| ..||||||+ |+|+.++.. ...+++++.+.+.+
T Consensus 154 i~~~e~~~~~~-~~~~~liDvR~~~e~~G~~~~~~~~~~~ghIpgA~--------nip~~~~~~--~~~~~~~~~l~~~~ 222 (280)
T 1urh_A 154 VKVTDVLLASH-ENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGAL--------NVPWTELVR--EGELKTTDELDAIF 222 (280)
T ss_dssp CCHHHHHHHHH-HTCSEEEECSCHHHHSSCCCC----CCSSSCTTCE--------ECCGGGGBS--SSSBCCHHHHHHHH
T ss_pred EcHHHHHHHhc-CCCcEEEeCCchhhcccccCCCCCCCcCccCCCce--------EeeHHHhhc--CCccCCHHHHHHHH
Confidence 89999999985 457899999999999 689999999 999877765 22344455566555
Q ss_pred HHHHHhhhcccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHH-cCCCcccc
Q 012218 341 TAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVK-EGLRIKEL 402 (468)
Q Consensus 341 ~alGI~~Lk~l~kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~-aGLPv~~~ 402 (468)
.+.++ +++++||+||++|.||..++..|+.+||++|++|+|||.+|.+ .|+|+++.
T Consensus 223 ~~~~~------~~~~~ivv~C~~G~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~~~ 279 (280)
T 1urh_A 223 FGRGV------SYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLPVEPV 279 (280)
T ss_dssp HTTTC------CSSSCEEEECCSSSTHHHHHHHHHHTTCSSCEEECCSCCC------------
T ss_pred HHcCC------CCCCCEEEECChHHHHHHHHHHHHHcCCCCceeeCChHHHHhcCCCCCceec
Confidence 54444 7899999999999999999999999999999999999999987 59998753
No 24
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.79 E-value=1.7e-19 Score=180.75 Aligned_cols=119 Identities=10% Similarity=0.133 Sum_probs=101.8
Q ss_pred ccCHHHHHHHHhCCCCcEEEEcCChhh-HhhcCCCCCcccccccccccCcc-cccchhhhhhcCchhhHHHHHHHHHhhh
Q 012218 271 DLSPKSTLELLRGKENAVLIDVRHEDL-RERDGIPDLRRGARFRYASVYLP-EVGGSVKKLLRGGRELDDTLTAAVIRNL 348 (468)
Q Consensus 271 ~ISp~el~elL~~~~~avLIDVRs~~E-y~~gHIPGA~~a~~~~~~nIPl~-el~~~l~~ll~~~~~L~~~l~alGI~~L 348 (468)
.|+++++.++++ +++++|||||++.| |..||||||+ |+|+. .+.......+++++.+++.+..+|+
T Consensus 41 ~is~~~l~~~l~-~~~~~iiDvR~~~e~y~~gHIpGAi--------~ip~~~~~~~~~~~~~~~~~~~~~~l~~lgi--- 108 (318)
T 3hzu_A 41 LVTADWLSAHMG-APGLAIVESDEDVLLYDVGHIPGAV--------KIDWHTDLNDPRVRDYINGEQFAELMDRKGI--- 108 (318)
T ss_dssp EECHHHHHHHTT-CTTEEEEECCSSTTSGGGCBCTTEE--------ECCHHHHHBCSSSSSBCCHHHHHHHHHHTTC---
T ss_pred eecHHHHHHhcc-CCCEEEEECCCChhHHhcCcCCCCe--------EeCchhhhccCcccCCCCHHHHHHHHHHcCC---
Confidence 599999999984 56799999999887 9999999999 88863 2332333456677788888888877
Q ss_pred cccCCCceEEEEeCCCc-hHHHHHHHHHHccCCCEEEecchHHHHHHcCCCcccccc
Q 012218 349 KIVQDRSKVIVMDADGT-RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (468)
Q Consensus 349 k~l~kd~~IVVyC~sG~-RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv~~~~~ 404 (468)
+++++||+||++|. ||.++++.|+.+||++|++|+||+.+|+++|+|+++..+
T Consensus 109 ---~~~~~vVvyc~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~ 162 (318)
T 3hzu_A 109 ---ARDDTVVIYGDKSNWWAAYALWVFTLFGHADVRLLNGGRDLWLAERRETTLDVP 162 (318)
T ss_dssp ---CTTCEEEEECSGGGHHHHHHHHHHHHTTCSCEEEETTHHHHHHHTTCCCBCCCC
T ss_pred ---CCCCeEEEECCCCCccHHHHHHHHHHcCCCceEEccCCHHHHhhcCCCcccCCC
Confidence 88999999999988 999999999999999999999999999999999987533
No 25
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=99.78 E-value=8.5e-20 Score=160.85 Aligned_cols=113 Identities=19% Similarity=0.198 Sum_probs=88.0
Q ss_pred CcccCHHHHHHHHhCCCCcEEEEcCChhhHhhcCC-------CCCcccccccccccCcccccchhhhhhcCchhhHHHHH
Q 012218 269 SGDLSPKSTLELLRGKENAVLIDVRHEDLRERDGI-------PDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLT 341 (468)
Q Consensus 269 ~~~ISp~el~elL~~~~~avLIDVRs~~Ey~~gHI-------PGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l~ 341 (468)
.+.|+++++.++++++++++|||||++.||+.+|+ |||+ |||+.++.. +.++.+ +.
T Consensus 4 ~~~is~~e~~~~l~~~~~~~liDVR~~~E~~~~~~~~~~g~~~ga~--------~ip~~~~~~--------~~~~~~-l~ 66 (134)
T 1vee_A 4 GSSGSAKNAYTKLGTDDNAQLLDIRATADFRQVGSPNIKGLGKKAV--------STVYNGEDK--------PGFLKK-LS 66 (134)
T ss_dssp SCBCCHHHHHHHHHHCTTEEEEECSCHHHHHHTCEECCTTTSCCCE--------ECCCCGGGH--------HHHHHH-HH
T ss_pred CCccCHHHHHHHHHhCCCeEEEEcCCHHHHhhcCCCcccccCCceE--------EeecccccC--------hhHHHH-HH
Confidence 35799999999986456799999999999987544 6888 888765421 011111 11
Q ss_pred HHHHhhhcccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchH---HHHHHcCCCccccc
Q 012218 342 AAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGF---QSWVKEGLRIKELK 403 (468)
Q Consensus 342 alGI~~Lk~l~kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~---~aW~~aGLPv~~~~ 403 (468)
+. ...+++++||+||++|.||..+++.|+++||++|++|.||| .+|+++|+|+++..
T Consensus 67 ~~-----~~~~~~~~ivv~C~sG~RS~~aa~~L~~~G~~~v~~l~GG~~~~~~W~~~g~p~~~~~ 126 (134)
T 1vee_A 67 LK-----FKDPENTTLYILDKFDGNSELVAELVALNGFKSAYAIKDGAEGPRGWLNSSLPWIEPK 126 (134)
T ss_dssp TT-----CSCGGGCEEEEECSSSTTHHHHHHHHHHHTCSEEEECTTTTTSTTSSGGGTCCEECCC
T ss_pred HH-----hCCCCCCEEEEEeCCCCcHHHHHHHHHHcCCcceEEecCCccCCcchhhcCCCCCCCC
Confidence 00 00157899999999999999999999999999999999999 78999999998753
No 26
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=99.78 E-value=3.5e-19 Score=175.71 Aligned_cols=122 Identities=20% Similarity=0.310 Sum_probs=103.8
Q ss_pred CCcccCHHHHHHHHhCC---CCcEEEEcC--------ChhhHhhcCCCCCcccccccccccCcccccch---hhhhhcCc
Q 012218 268 YSGDLSPKSTLELLRGK---ENAVLIDVR--------HEDLRERDGIPDLRRGARFRYASVYLPEVGGS---VKKLLRGG 333 (468)
Q Consensus 268 y~~~ISp~el~elL~~~---~~avLIDVR--------s~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~~---l~~ll~~~ 333 (468)
|...|+++++.++++++ ++++||||| ++.||..||||||+ |+|+.++... ...+++++
T Consensus 6 ~~~~is~~~l~~~l~~~~~~~~~~liDvR~~~~~~~~~~~ey~~gHIpGAi--------~ip~~~l~~~~~~~~~~lp~~ 77 (296)
T 1rhs_A 6 YRALVSTKWLAESVRAGKVGPGLRVLDASWYSPGTREARKEYLERHVPGAS--------FFDIEECRDKASPYEVMLPSE 77 (296)
T ss_dssp CCSEECHHHHHHHHHTTCCBTTEEEEECCCCCTTSCCHHHHHHHSBCTTCE--------ECCTTTSSCTTSSSSSCCCCH
T ss_pred cCceeeHHHHHHHHhccccCCCeEEEEecccCcCCcchhhhHhhCcCCCCE--------EeCHHHhcCCCCCCCCCCCCH
Confidence 45679999999999642 579999999 68999999999999 8888766543 23466777
Q ss_pred hhhHHHHHHHHHhhhcccCCCceEEEEeCC--Cch-HHHHHHHHHHccCCCEEEecchHHHHHHcCCCccccc
Q 012218 334 RELDDTLTAAVIRNLKIVQDRSKVIVMDAD--GTR-SKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELK 403 (468)
Q Consensus 334 ~~L~~~l~alGI~~Lk~l~kd~~IVVyC~s--G~R-S~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv~~~~ 403 (468)
+.+++.+..+|+ +++++||+||++ |.+ +.++++.|+.+||++|++|+||+.+|+++|+|++...
T Consensus 78 ~~~~~~l~~lgi------~~~~~vVvyc~~~~g~~~a~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~ 144 (296)
T 1rhs_A 78 AGFADYVGSLGI------SNDTHVVVYDGDDLGSFYAPRVWWMFRVFGHRTVSVLNGGFRNWLKEGHPVTSEP 144 (296)
T ss_dssp HHHHHHHHHTTC------CTTCEEEEECCCSSSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHTTCCCBCSC
T ss_pred HHHHHHHHHcCC------CCCCeEEEEcCCCCCcchHHHHHHHHHHcCCCcEEEcCCCHHHHHHcCCccccCC
Confidence 778887877777 789999999999 876 8899999999999999999999999999999998764
No 27
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=99.78 E-value=8.9e-20 Score=164.71 Aligned_cols=108 Identities=20% Similarity=0.331 Sum_probs=90.4
Q ss_pred cccCHHHHHHHHhCCCCcEEEEcCChhhHhhcCCCCCcccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhc
Q 012218 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (468)
Q Consensus 270 ~~ISp~el~elL~~~~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l~alGI~~Lk 349 (468)
..|+++++.+++ ++++++|||||+++||..||||||+ |+|+.++...+.++ + +
T Consensus 28 ~~Is~~el~~~l-~~~~~~lIDvR~~~ey~~ghIpgAi--------nip~~~l~~~~~~l----------~--------~ 80 (152)
T 1t3k_A 28 SYITSTQLLPLH-RRPNIAIIDVRDEERNYDGHIAGSL--------HYASGSFDDKISHL----------V--------Q 80 (152)
T ss_dssp EEECTTTTTTCC-CCTTEEEEEESCSHHHHSSCCCSSE--------EECCSSSSTTHHHH----------H--------H
T ss_pred ceECHHHHHHHh-cCCCEEEEECCChhhccCccCCCCE--------ECCHHHHHHHHHHH----------H--------H
Confidence 479999999887 3568999999999999999999999 99988776544332 1 1
Q ss_pred ccCCCceEEEEeC-CCchHHHHHHHHHH--------ccCCCEEEecchHHHHHHcCCCcccccc
Q 012218 350 IVQDRSKVIVMDA-DGTRSKGIARSLRK--------LGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (468)
Q Consensus 350 ~l~kd~~IVVyC~-sG~RS~~AA~~L~~--------~Gf~nV~vLdGG~~aW~~aGLPv~~~~~ 404 (468)
.++++++||+||+ +|.|+..+++.|.+ .||++|++|+||+.+|.++|+|+++..+
T Consensus 81 ~~~~~~~iVvyC~~~G~rs~~aa~~L~~~l~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~~ 144 (152)
T 1t3k_A 81 NVKDKDTLVFHSALSQVRGPTCARRLVNYLDEKKEDTGIKNIMILERGFNGWEASGKPVCRCAE 144 (152)
T ss_dssp TCCSCCEEEESSSCCSSSHHHHHHHHHHHHHHSSSCCCSSEEEEESSTTHHHHHHSCSSCCCSC
T ss_pred hcCCCCEEEEEcCCCCcchHHHHHHHHHHHHHHHHhcCCCcEEEEcCCHHHHHHcCCccccCCC
Confidence 1367889999999 99999999988754 8999999999999999999999987643
No 28
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.78 E-value=2.3e-19 Score=175.25 Aligned_cols=116 Identities=18% Similarity=0.194 Sum_probs=96.7
Q ss_pred cCHHHHHHHHhC--CCCcEEEEcCChhhHh----------------hcCCCCCcccccccccccCcccccchhhhhhcCc
Q 012218 272 LSPKSTLELLRG--KENAVLIDVRHEDLRE----------------RDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGG 333 (468)
Q Consensus 272 ISp~el~elL~~--~~~avLIDVRs~~Ey~----------------~gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~ 333 (468)
|+++++.++++. .++..|||||++.||. .||||||+ |+|+.++.... ..++++
T Consensus 148 i~~~el~~~l~~~~~~~~~liDvR~~~e~~g~~~~~~~~~~~~~~~~ghIpgA~--------~ip~~~~~~~~-~~~~~~ 218 (285)
T 1uar_A 148 AYRDDVLEHIIKVKEGKGALVDVRSPQEYRGELTHMPDYPQEGALRAGHIPGAK--------NIPWAKAVNPD-GTFKSA 218 (285)
T ss_dssp ECHHHHHHHHHHHHTTSEEEEECSCHHHHHTCC--------CCCSCCSBCTTCE--------ECCGGGGBCTT-SCBCCH
T ss_pred EcHHHHHHHHhhcccCCCcEEEcCCccceeeeccccccccccccccCCcCCCcc--------ccCHHHhcCCC-CcCCCH
Confidence 899999998830 1245799999999997 89999999 89987765432 245666
Q ss_pred hhhHHHHHHHHHhhhcccCCCceEEEEeCCCchHHHHHHHHH-HccCCCEEEecchHHHHH-HcCCCcccc
Q 012218 334 RELDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLR-KLGVMRAFLVQGGFQSWV-KEGLRIKEL 402 (468)
Q Consensus 334 ~~L~~~l~alGI~~Lk~l~kd~~IVVyC~sG~RS~~AA~~L~-~~Gf~nV~vLdGG~~aW~-~aGLPv~~~ 402 (468)
+.+.+.+..+|+ +++++||+||++|.||..+++.|+ .+||++|++|+||+.+|. .+|+|++++
T Consensus 219 ~~l~~~~~~~g~------~~~~~ivvyC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~~g 283 (285)
T 1uar_A 219 EELRALYEPLGI------TKDKDIVVYCRIAERSSHSWFVLKYLLGYPHVKNYDGSWTEWGNLVGVPIAKG 283 (285)
T ss_dssp HHHHHHHGGGTC------CTTSEEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCS
T ss_pred HHHHHHHHHcCC------CCCCCEEEECCchHHHHHHHHHHHHHcCCCCcceeCchHHHHhcCCCCCcccC
Confidence 677766665555 789999999999999999999999 999999999999999998 799999875
No 29
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.77 E-value=4.3e-19 Score=172.64 Aligned_cols=119 Identities=16% Similarity=0.200 Sum_probs=98.9
Q ss_pred ccCHHHHHHHHhCCCCcEEEEcCC-hhhHhhcCCCCCcccccccccccCcccc-cchhhhhhcCchhhHHHHHHHHHhhh
Q 012218 271 DLSPKSTLELLRGKENAVLIDVRH-EDLRERDGIPDLRRGARFRYASVYLPEV-GGSVKKLLRGGRELDDTLTAAVIRNL 348 (468)
Q Consensus 271 ~ISp~el~elL~~~~~avLIDVRs-~~Ey~~gHIPGA~~a~~~~~~nIPl~el-~~~l~~ll~~~~~L~~~l~alGI~~L 348 (468)
.|+++++.++++ +++.+|||||+ +.||..||||||+ |+|+..+ .......+++++.+.+.+..+|+
T Consensus 7 ~is~~~l~~~l~-~~~~~liDvR~~~~ey~~ghIpgA~--------~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi--- 74 (277)
T 3aay_A 7 LVSADWAESNLH-APKVVFVEVDEDTSAYDRDHIAGAI--------KLDWRTDLQDPVKRDFVDAQQFSKLLSERGI--- 74 (277)
T ss_dssp EECHHHHHTTTT-CTTEEEEEEESSSHHHHHCBSTTCE--------EEETTTTTBCSSSSSBCCHHHHHHHHHHHTC---
T ss_pred eEcHHHHHHHhC-CCCEEEEEcCCChhhHhhCCCCCcE--------EecccccccCCCCCCCCCHHHHHHHHHHcCC---
Confidence 589999999884 45799999998 8999999999998 7777542 22223345556667777777777
Q ss_pred cccCCCceEEEEeCCCc-hHHHHHHHHHHccCCCEEEecchHHHHHHcCCCcccccc
Q 012218 349 KIVQDRSKVIVMDADGT-RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (468)
Q Consensus 349 k~l~kd~~IVVyC~sG~-RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv~~~~~ 404 (468)
+++++||+||++|. +|.++++.|+.+||++|++|+||+.+|+++|+|+++..+
T Consensus 75 ---~~~~~vvvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 128 (277)
T 3aay_A 75 ---ANEDTVILYGGNNNWFAAYAYWYFKLYGHEKVKLLDGGRKKWELDGRPLSSDPV 128 (277)
T ss_dssp ---CTTSEEEEECSGGGHHHHHHHHHHHHTTCCSEEEETTHHHHHHHTTCCCBCCCC
T ss_pred ---CCCCeEEEECCCCCchHHHHHHHHHHcCCCcEEEecCCHHHHHHcCCccccCCC
Confidence 88999999999976 789999999999999999999999999999999987644
No 30
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=99.77 E-value=3e-19 Score=174.39 Aligned_cols=119 Identities=17% Similarity=0.188 Sum_probs=99.4
Q ss_pred ccCHHHHHHHHhCCCCcEEEEcC-ChhhHhhcCCCCCcccccccccccCccc-ccchhhhhhcCchhhHHHHHHHHHhhh
Q 012218 271 DLSPKSTLELLRGKENAVLIDVR-HEDLRERDGIPDLRRGARFRYASVYLPE-VGGSVKKLLRGGRELDDTLTAAVIRNL 348 (468)
Q Consensus 271 ~ISp~el~elL~~~~~avLIDVR-s~~Ey~~gHIPGA~~a~~~~~~nIPl~e-l~~~l~~ll~~~~~L~~~l~alGI~~L 348 (468)
.|+++++.++++ +++++||||| ++.||..||||||+ |+|+.. +.......+++++.+.+.+..+|+
T Consensus 9 ~is~~~l~~~l~-~~~~~liDvR~~~~e~~~ghIpgA~--------~ip~~~~~~~~~~~~~~~~~~~~~~~~~~gi--- 76 (285)
T 1uar_A 9 LVSTDWVQEHLE-DPKVRVLEVDEDILLYDTGHIPGAQ--------KIDWQRDFWDPVVRDFISEEEFAKLMERLGI--- 76 (285)
T ss_dssp EECHHHHHTTTT-CTTEEEEEECSSTTHHHHCBCTTCE--------EECHHHHHBCSSSSSBCCHHHHHHHHHHTTC---
T ss_pred eEcHHHHHHhcC-CCCEEEEEcCCCcchhhcCcCCCCE--------ECCchhhccCCcccCCCCHHHHHHHHHHcCC---
Confidence 699999999884 4579999999 79999999999999 888753 322223345566667777776666
Q ss_pred cccCCCceEEEEeCCCc-hHHHHHHHHHHccCCCEEEecchHHHHHHcCCCcccccc
Q 012218 349 KIVQDRSKVIVMDADGT-RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKS 404 (468)
Q Consensus 349 k~l~kd~~IVVyC~sG~-RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv~~~~~ 404 (468)
+++++||+||++|. +|.++++.|+.+||++|++|+||+.+|.++|+|++...+
T Consensus 77 ---~~~~~ivvyc~~g~~~s~~a~~~L~~~G~~~v~~l~GG~~~W~~~g~p~~~~~~ 130 (285)
T 1uar_A 77 ---SNDTTVVLYGDKNNWWAAYAFWFFKYNGHKDVRLMNGGRQKWVEEGRPLTTEVP 130 (285)
T ss_dssp ---CTTCEEEEECHHHHHHHHHHHHHHHHTTCSCEEEETTHHHHHHHHTCCCBCCCC
T ss_pred ---CCCCeEEEECCCCCccHHHHHHHHHHcCCCCeEEecCCHHHHHHCCCcccCCCC
Confidence 78999999999998 799999999999999999999999999999999987543
No 31
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=99.76 E-value=7.3e-19 Score=152.03 Aligned_cols=109 Identities=20% Similarity=0.308 Sum_probs=79.0
Q ss_pred cccCHHHHHHHHhCCCCcEEEEcCChhhHhhcCCCCCcccccccccccCcccccchhh--hhhc--------------Cc
Q 012218 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVK--KLLR--------------GG 333 (468)
Q Consensus 270 ~~ISp~el~elL~~~~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~~l~--~ll~--------------~~ 333 (468)
..|+++++.+ +++++|||||++.||..||||||+ |+|+..+..... .+.. ..
T Consensus 5 ~~i~~~el~~----~~~~~iiDvR~~~e~~~ghIpgA~--------nip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (134)
T 3g5j_A 5 SVIKIEKALK----LDKVIFVDVRTEGEYEEDHILNAI--------NMPLFKNNEHNEVGTIYKMQGKHEAIQKGFDYVS 72 (134)
T ss_dssp CEECHHHHTT----CTTEEEEECSCHHHHHHCCCTTCE--------ECCSSCHHHHHHHHHHHHHHCHHHHHHHHHHHHG
T ss_pred cccCHHHHHh----cCCcEEEEcCCHHHHhcCCCCCCE--------EcCccchhhhhcccceeeecChhHHHhccccccc
Confidence 4688888765 468999999999999999999999 899865432100 0000 00
Q ss_pred hhhHHHHHHHHHhhhcccCCC-ceEEEEe-CCCchHHHHHHHHHHccCCCEEEecchHHHHHHcC
Q 012218 334 RELDDTLTAAVIRNLKIVQDR-SKVIVMD-ADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEG 396 (468)
Q Consensus 334 ~~L~~~l~alGI~~Lk~l~kd-~~IVVyC-~sG~RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~aG 396 (468)
..+.+....+ ..++++ ++||+|| ++|.||..+++.|+.+|| +|++|+||+.+|++..
T Consensus 73 ~~~~~~~~~~-----~~~~~~~~~ivvyC~~~G~rs~~a~~~L~~~G~-~v~~l~GG~~~W~~~~ 131 (134)
T 3g5j_A 73 YKLKDIYLQA-----AELALNYDNIVIYCARGGMRSGSIVNLLSSLGV-NVYQLEGGYKAYRNFV 131 (134)
T ss_dssp GGHHHHHHHH-----HHHHTTCSEEEEECSSSSHHHHHHHHHHHHTTC-CCEEETTHHHHHHHHH
T ss_pred ccHHHHHHHH-----HHhccCCCeEEEEECCCChHHHHHHHHHHHcCC-ceEEEeCcHHHHHHHh
Confidence 0011111111 123567 9999999 589999999999999999 9999999999999743
No 32
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.76 E-value=2.7e-18 Score=170.75 Aligned_cols=121 Identities=18% Similarity=0.278 Sum_probs=100.4
Q ss_pred CcccCHHHHHHHHhCC---CCcEEEEcC---------ChhhHhhcCCCCCcccccccccccCccccc---chhhhhhcCc
Q 012218 269 SGDLSPKSTLELLRGK---ENAVLIDVR---------HEDLRERDGIPDLRRGARFRYASVYLPEVG---GSVKKLLRGG 333 (468)
Q Consensus 269 ~~~ISp~el~elL~~~---~~avLIDVR---------s~~Ey~~gHIPGA~~a~~~~~~nIPl~el~---~~l~~ll~~~ 333 (468)
...|+++++.++++++ ++++||||| ++.||..||||||+ |+|+..+. .....+++++
T Consensus 21 ~~lIs~~~l~~~l~~~~~~~~~~ilDvR~~~~~~~~~~~~ey~~gHIpGAi--------~i~~~~~~~~~~~~~~~lp~~ 92 (302)
T 3olh_A 21 QSMVSAQWVAEALRAPRAGQPLQLLDASWYLPKLGRDARREFEERHIPGAA--------FFDIDQCSDRTSPYDHMLPGA 92 (302)
T ss_dssp CCEECHHHHHHHHHCCCSSCCEEEEECCCCCCC--CCHHHHHHHSCCTTCE--------ECCTTTSSCSSCSSSSCCCCH
T ss_pred CCccCHHHHHHHhcCcCCCCCEEEEEeecCCCccCcccHHHHhhCcCCCCe--------EeCHHHhcCcCCCCCCCCCCH
Confidence 3469999999999643 389999999 78999999999998 77775542 2234456677
Q ss_pred hhhHHHHHHHHHhhhcccCCCceEEEEeCC---CchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCccccc
Q 012218 334 RELDDTLTAAVIRNLKIVQDRSKVIVMDAD---GTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELK 403 (468)
Q Consensus 334 ~~L~~~l~alGI~~Lk~l~kd~~IVVyC~s---G~RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv~~~~ 403 (468)
+.+++.+.++|+ +++++||+||++ +.+|.++++.|+.+||++|++|+||+.+|+++|+|++...
T Consensus 93 ~~~~~~~~~lgi------~~~~~VVvyc~~~~g~~~a~ra~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~ 159 (302)
T 3olh_A 93 EHFAEYAGRLGV------GAATHVVIYDASDQGLYSAPRVWWMFRAFGHHAVSLLDGGLRHWLRQNLPLSSGK 159 (302)
T ss_dssp HHHHHHHHHTTC------CSSCEEEEECCCTTSCSSHHHHHHHHHHTTCCCEEEETTHHHHHHHSCCC-CCSC
T ss_pred HHHHHHHHHcCC------CCCCEEEEEeCCCCCcchHHHHHHHHHHcCCCcEEECCCCHHHHHHcCCCcccCC
Confidence 778888888887 889999999964 3479999999999999999999999999999999998763
No 33
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.75 E-value=5.7e-19 Score=184.70 Aligned_cols=191 Identities=19% Similarity=0.223 Sum_probs=129.4
Q ss_pred cchhHHHHHHHHHHhhhhcccCcceEEEeeccCCCCCCCchHHHhhh------hhHhhhhhcccccchHHHHHHHHHHHH
Q 012218 159 TVAAVDVLRNTIVALEESMTNGASFVVYYYGTTKESLPPEIRDALNL------YEDRAVKLWRPVGSALQQVSVAIEGLE 232 (468)
Q Consensus 159 ~~~~~d~l~~~~~~~~~~~~~~~~~~~~~~G~~~~~l~p~~~~~~~~------~e~~~~~v~~p~g~~~~q~~~~ie~le 232 (468)
..++.++|++.+.. . .+.|.|+...|.-||++.++.-+....... ..++-..+++--|. +. .+..-|+
T Consensus 273 ~~is~~~l~~~l~~-~-~iiD~R~~~~y~~ghIpGA~~i~~~~~~~~~~~~l~~~~~~vvvy~~~~~-~~---~~~~~L~ 346 (474)
T 3tp9_A 273 VDLPPERVRAWREG-G-VVLDVRPADAFAKRHLAGSLNIPWNKSFVTWAGWLLPADRPIHLLAADAI-AP---DVIRALR 346 (474)
T ss_dssp CCCCGGGHHHHHHT-S-EEEECSCHHHHHHSEETTCEECCSSTTHHHHHHHHCCSSSCEEEECCTTT-HH---HHHHHHH
T ss_pred ceeCHHHHHHHhCC-C-EEEECCChHHHhccCCCCeEEECcchHHHHHHHhcCCCCCeEEEEECCCc-HH---HHHHHHH
Confidence 45677899988866 3 899999999999999998765544321100 01111112222121 11 1111111
Q ss_pred HhcCCCCCCCcchHHHHH-hhhHHHHHHHHHHHhCCC----CcccCHHHHHHHHhCCCCcEEEEcCChhhHhhcCCCCCc
Q 012218 233 RSLGFDPNDPIVPFVVFL-GTSATLWIFYWWWTYGGY----SGDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLR 307 (468)
Q Consensus 233 ~~lgf~~~~PvL~~~~~v-g~~aal~l~~~l~~~~~y----~~~ISp~el~elL~~~~~avLIDVRs~~Ey~~gHIPGA~ 307 (468)
.+|++. +.. +. |..+ |...++ ...++++++.++++ +++.+|||+|++.||..||||||+
T Consensus 347 -~~G~~~---v~~---~l~G~~~--------W~~~g~~~~~~~~i~~~~l~~~~~-~~~~~lvDvR~~~e~~~ghIpgA~ 410 (474)
T 3tp9_A 347 -SIGIDD---VVD---WTDPAAV--------DRAAPDDVASYANVSPDEVRGALA-QQGLWLLDVRNVDEWAGGHLPQAH 410 (474)
T ss_dssp -HTTCCC---EEE---EECGGGG--------TTCCGGGEECCEEECHHHHHHTTT-TTCCEEEECSCHHHHHHCBCTTCE
T ss_pred -HcCCcc---eEE---ecCcHHH--------HHhcccccccccccCHHHHHHHhc-CCCcEEEECCCHHHHhcCcCCCCE
Confidence 124321 110 00 1110 111111 13689999999884 468999999999999999999999
Q ss_pred ccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhcccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecc
Q 012218 308 RGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQG 387 (468)
Q Consensus 308 ~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l~alGI~~Lk~l~kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdG 387 (468)
|+|+.++...+.+ ++++++||+||++|.||..+++.|+.+||++|++|+|
T Consensus 411 --------~ip~~~l~~~~~~----------------------l~~~~~vvv~C~~G~ra~~a~~~L~~~G~~~v~~~~G 460 (474)
T 3tp9_A 411 --------HIPLSKLAAHIHD----------------------VPRDGSVCVYCRTGGRSAIAASLLRAHGVGDVRNMVG 460 (474)
T ss_dssp --------ECCHHHHTTTGGG----------------------SCSSSCEEEECSSSHHHHHHHHHHHHHTCSSEEEETT
T ss_pred --------ECCHHHHHHHHhc----------------------CCCCCEEEEECCCCHHHHHHHHHHHHcCCCCEEEecC
Confidence 9998776554322 3788999999999999999999999999999999999
Q ss_pred hHHHHHHcCCCccc
Q 012218 388 GFQSWVKEGLRIKE 401 (468)
Q Consensus 388 G~~aW~~aGLPv~~ 401 (468)
||.+|.++|+|++.
T Consensus 461 g~~~W~~~g~p~~~ 474 (474)
T 3tp9_A 461 GYEAWRGKGFPVEA 474 (474)
T ss_dssp HHHHHHHTTCCCBC
T ss_pred hHHHHHhCCCCCCC
Confidence 99999999999863
No 34
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=99.75 E-value=2.5e-18 Score=172.34 Aligned_cols=113 Identities=19% Similarity=0.222 Sum_probs=91.8
Q ss_pred cCHHHHHHHHhCCCCcEEEEcCChhhHhh----------------cCCCCCcccccccccccCcccccchhhhhhcCchh
Q 012218 272 LSPKSTLELLRGKENAVLIDVRHEDLRER----------------DGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRE 335 (468)
Q Consensus 272 ISp~el~elL~~~~~avLIDVRs~~Ey~~----------------gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~ 335 (468)
++++|+.+++++ . +|||||++.||.. ||||||+ |+|+.++....+ .++++++
T Consensus 181 i~~~el~~~l~~--~-~liDvR~~~e~~~~~~~~~~~~~~~~~~~GhIpGA~--------niP~~~~~~~~g-~~~~~~~ 248 (318)
T 3hzu_A 181 AFRDDVLAILGA--Q-PLIDVRSPEEYTGKRTHMPDYPEEGALRAGHIPTAV--------HIPWGKAADESG-RFRSREE 248 (318)
T ss_dssp CCHHHHHHHTTT--S-CEEECSCHHHHHTSCSSCTTSCSCSCSSCSBCTTCE--------ECCGGGGBCTTS-CBCCHHH
T ss_pred ccHHHHHHhhcC--C-eEEecCCHHHhcccccCccccccccCCcCcCCCCee--------ecCHHHhcCCCC-cCCCHHH
Confidence 678999998843 3 8999999999998 9999999 999876643222 2344444
Q ss_pred hHHHHHHHHHhhhcccCCCceEEEEeCCCchHHHHHHHHHH-ccCCCEEEecchHHHHHH-cCCCcccccc
Q 012218 336 LDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRK-LGVMRAFLVQGGFQSWVK-EGLRIKELKS 404 (468)
Q Consensus 336 L~~~l~alGI~~Lk~l~kd~~IVVyC~sG~RS~~AA~~L~~-~Gf~nV~vLdGG~~aW~~-aGLPv~~~~~ 404 (468)
+.+.+ ..++++++||+||++|.||..++..|++ +||++|++|+|||.+|.+ .|+|++++..
T Consensus 249 l~~~~--------~~l~~~~~ivvyC~sG~rs~~a~~~L~~~~G~~~v~~~~GG~~~W~~~~g~Pv~~g~~ 311 (318)
T 3hzu_A 249 LERLY--------DFINPDDQTVVYCRIGERSSHTWFVLTHLLGKADVRNYDGSWTEWGNAVRVPIVAGEE 311 (318)
T ss_dssp HHHHT--------TTCCTTCCCEEECSSSHHHHHHHHHHHHTSCCSSCEECTTHHHHHTTSTTCCCBCSSS
T ss_pred HHHHh--------cCCCCCCcEEEEcCChHHHHHHHHHHHHHcCCCCeeEeCCcHHHHhcCCCCCcccCCC
Confidence 54433 2347899999999999999999999997 999999999999999995 7999998743
No 35
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=99.74 E-value=1.3e-18 Score=141.30 Aligned_cols=84 Identities=20% Similarity=0.238 Sum_probs=69.9
Q ss_pred CcEEEEcCChhhHhhcCCCCCcccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhcccCCCceEEEEeCCCc
Q 012218 286 NAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDRSKVIVMDADGT 365 (468)
Q Consensus 286 ~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l~alGI~~Lk~l~kd~~IVVyC~sG~ 365 (468)
+++|||||++.||..+|||||+ |+|+.++...+.+ +++ +++++||+||++|.
T Consensus 1 ~~~liDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~~--------------l~~------~~~~~ivv~C~~g~ 52 (85)
T 2jtq_A 1 AEHWIDVRVPEQYQQEHVQGAI--------NIPLKEVKERIAT--------------AVP------DKNDTVKVYCNAGR 52 (85)
T ss_dssp CEEEEECSCHHHHTTEEETTCE--------ECCHHHHHHHHHH--------------HCC------CTTSEEEEEESSSH
T ss_pred CCEEEECCCHHHHHhCCCCCCE--------EcCHHHHHHHHHH--------------hCC------CCCCcEEEEcCCCc
Confidence 4689999999999999999999 9998766443322 222 67899999999999
Q ss_pred hHHHHHHHHHHccCCCEEEecchHHHHHHcCCCccc
Q 012218 366 RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKE 401 (468)
Q Consensus 366 RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv~~ 401 (468)
||..+++.|+++||++|+++ |||.+|. .|+++
T Consensus 53 rs~~aa~~L~~~G~~~v~~l-GG~~~w~---~~~~~ 84 (85)
T 2jtq_A 53 QSGQAKEILSEMGYTHVENA-GGLKDIA---MPKVK 84 (85)
T ss_dssp HHHHHHHHHHHTTCSSEEEE-EETTTCC---SCEEE
T ss_pred hHHHHHHHHHHcCCCCEEec-cCHHHHh---ccccc
Confidence 99999999999999999999 9988884 45543
No 36
>2a2k_A M-phase inducer phosphatase 2; dual specificity, substrate trapping, active site mutant, hydrolase; 1.52A {Homo sapiens} PDB: 2ifv_A 1ymd_A 1ym9_A 1ymk_A 1yml_A 1ys0_A 1cwt_A 2ifd_A
Probab=99.73 E-value=4.7e-18 Score=155.46 Aligned_cols=132 Identities=16% Similarity=0.178 Sum_probs=94.1
Q ss_pred cccCHHHHHHHHhCC-----CCcEEEEcCChhhHhhcCCCCCcccccccccccCcccccchhhhhhcCchhhHHHHHHHH
Q 012218 270 GDLSPKSTLELLRGK-----ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAV 344 (468)
Q Consensus 270 ~~ISp~el~elL~~~-----~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l~alG 344 (468)
..|+++++.++++++ ++++|||||++.||..||||||+ |+|+.++...... ....+
T Consensus 24 ~~is~~el~~~l~~~~~~~~~~~~liDvR~~~ey~~ghIpgAi--------nip~~~l~~~~~~---~~~~~-------- 84 (175)
T 2a2k_A 24 KYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAV--------NLPLERDAESFLL---KSPIA-------- 84 (175)
T ss_dssp CEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCE--------ECCSHHHHHHHHH---SSCCC--------
T ss_pred ceeCHHHHHHHHhcccccCCCCEEEEECCCHHHHcCCcCCCcE--------ECChhHHHHHhhh---hhhhc--------
Confidence 479999999999543 47899999999999999999999 9998665332100 00000
Q ss_pred HhhhcccCCCceEEE--EeC-CCchHHHHHHHHHHc----------cCCCEEEecchHHHHHHcCCCccccccccchhhc
Q 012218 345 IRNLKIVQDRSKVIV--MDA-DGTRSKGIARSLRKL----------GVMRAFLVQGGFQSWVKEGLRIKELKSETALTIL 411 (468)
Q Consensus 345 I~~Lk~l~kd~~IVV--yC~-sG~RS~~AA~~L~~~----------Gf~nV~vLdGG~~aW~~aGLPv~~~~~~~~l~i~ 411 (468)
..+++++||+ ||+ +|.||..+++.|++. ||++|++|+||+.+|.++|.|+.....-.+.. .
T Consensus 85 -----~~~~~~~ivvv~yC~~~g~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~~~~~~~~~~y~~~~-~ 158 (175)
T 2a2k_A 85 -----PCSLDKRVILIFHSEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCEPQDYRPMN-H 158 (175)
T ss_dssp -----C----CEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEESSCCCCTT-C
T ss_pred -----cccCCCCeEEEEECCCCCCccHHHHHHHHHhhhhhhhhhhcCCceEEEEcCCHHHHHHHCccccCCCCccccc-c
Confidence 0136778754 699 899999999999864 99999999999999999999987643222222 1
Q ss_pred hhhHHHHHHHhcCCC
Q 012218 412 NEDAEAILEDINSSP 426 (468)
Q Consensus 412 ~~~~e~~lq~ir~~~ 426 (468)
.+-..++.+..+++.
T Consensus 159 ~~~~~~l~~~~~~~~ 173 (175)
T 2a2k_A 159 EAFKDELKTFRLKTR 173 (175)
T ss_dssp GGGHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHhc
Confidence 223455667777764
No 37
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=99.73 E-value=2.7e-18 Score=170.73 Aligned_cols=112 Identities=13% Similarity=0.123 Sum_probs=96.7
Q ss_pred cCHHHHHHHHhCCCCcEEEEcCChhhH-----------hhcCCCCCcccccccccccCcccccchhhhhhcCchhhHHHH
Q 012218 272 LSPKSTLELLRGKENAVLIDVRHEDLR-----------ERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTL 340 (468)
Q Consensus 272 ISp~el~elL~~~~~avLIDVRs~~Ey-----------~~gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l 340 (468)
++++++.++++ +++++|||||++.|| +.||||||+ |+|+.++..... .+++++++.+.+
T Consensus 177 i~~~e~~~~~~-~~~~~liDvR~~~ef~G~~~~p~~~~~~GhIpGAi--------niP~~~l~~~~~-~~~~~~~l~~~~ 246 (302)
T 3olh_A 177 KTYEDIKENLE-SRRFQVVDSRATGRFRGTEPEPRDGIEPGHIPGTV--------NIPFTDFLSQEG-LEKSPEEIRHLF 246 (302)
T ss_dssp ECHHHHHHHHH-HCCSEEEECSCHHHHHTSSCCSSTTCCCCCCTTCE--------ECCGGGGBCSSS-CBCCHHHHHHHH
T ss_pred ecHHHHHHhhc-CCCcEEEecCCHHHccccccCCCcCCcCccCCCce--------ecCHHHhcCCCC-ccCCHHHHHHHH
Confidence 67889998885 467899999999999 799999999 999987754332 356677777777
Q ss_pred HHHHHhhhcccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCc
Q 012218 341 TAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRI 399 (468)
Q Consensus 341 ~alGI~~Lk~l~kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv 399 (468)
.+.++ +++++||+||++|.||..++..|+.+||++|++|+|||.+|.++|+|.
T Consensus 247 ~~~~~------~~~~~iv~yC~sG~rs~~a~~~L~~~G~~~v~~~~Gg~~~W~~~~~P~ 299 (302)
T 3olh_A 247 QEKKV------DLSKPLVATCGSGVTACHVALGAYLCGKPDVPIYDGSWVEWYMRARPE 299 (302)
T ss_dssp HHTTC------CTTSCEEEECSSSSTTHHHHHHHHTTTCCCCCEESSHHHHHHHHHCCC
T ss_pred HhcCC------CCCCCEEEECCChHHHHHHHHHHHHcCCCCeeEeCCcHHHHhhccCCC
Confidence 66666 789999999999999999999999999999999999999999999874
No 38
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=99.73 E-value=4.8e-18 Score=165.25 Aligned_cols=113 Identities=22% Similarity=0.206 Sum_probs=94.4
Q ss_pred cCHHHHHHHHhCCCCcEEEEcCChhhHhh----------------cCCCCCcccccccccccCcccccchhhhhhcCchh
Q 012218 272 LSPKSTLELLRGKENAVLIDVRHEDLRER----------------DGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRE 335 (468)
Q Consensus 272 ISp~el~elL~~~~~avLIDVRs~~Ey~~----------------gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~ 335 (468)
++++++.+++. +++ |||||++.||.. ||||||+ |+|+.++.... ..+++++.
T Consensus 146 ~~~~el~~~~~-~~~--liDvR~~~e~~~~~~~~~~~~~~~~~~~ghIpgA~--------~ip~~~~~~~~-~~~~~~~~ 213 (277)
T 3aay_A 146 AFRDEVLAAIN-VKN--LIDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAI--------NVPWSRAANED-GTFKSDEE 213 (277)
T ss_dssp ECHHHHHHTTT-TSE--EEECSCHHHHHTSCCC-----CCCCSCCSBCTTCE--------ECCGGGGBCTT-SCBCCHHH
T ss_pred cCHHHHHHhcC-CCC--EEEeCChHHeeeeecccccccccccccCCcCCCce--------ecCHHHhcCCC-CcCCCHHH
Confidence 67899998874 333 999999999985 9999999 89987654322 23556667
Q ss_pred hHHHHHHHHHhhhcccCCCceEEEEeCCCchHHHHHHHHHH-ccCCCEEEecchHHHHHH-cCCCcccc
Q 012218 336 LDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRK-LGVMRAFLVQGGFQSWVK-EGLRIKEL 402 (468)
Q Consensus 336 L~~~l~alGI~~Lk~l~kd~~IVVyC~sG~RS~~AA~~L~~-~Gf~nV~vLdGG~~aW~~-aGLPv~~~ 402 (468)
+.+.+.++++ +++++||+||++|.||..+++.|++ +||++|++|+|||.+|.+ +|+|++++
T Consensus 214 l~~~~~~~~~------~~~~~iv~yC~~G~rs~~a~~~L~~~~G~~~v~~l~GG~~~W~~~~g~pv~~g 276 (277)
T 3aay_A 214 LAKLYADAGL------DNSKETIAYCRIGERSSHTWFVLRELLGHQNVKNYDGSWTEYGSLVGAPIELG 276 (277)
T ss_dssp HHHHHHHHTC------CTTSCEEEECSSHHHHHHHHHHHHTTSCCSCEEEESSHHHHHTTSTTCCCBCC
T ss_pred HHHHHHHcCC------CCCCCEEEEcCcHHHHHHHHHHHHHHcCCCcceeeCchHHHHhcCCCCCCccC
Confidence 7777776666 7899999999999999999999995 999999999999999999 99999764
No 39
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=99.72 E-value=4.9e-18 Score=153.15 Aligned_cols=108 Identities=19% Similarity=0.223 Sum_probs=86.5
Q ss_pred cccCHHHHHHHHhCC-----CCcEEEEcCChhhHhhcCCCCCcccccccccccCcccccchhhhhhcCchhhHHHHHHHH
Q 012218 270 GDLSPKSTLELLRGK-----ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAV 344 (468)
Q Consensus 270 ~~ISp~el~elL~~~-----~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l~alG 344 (468)
..|+++++.++++++ ++++|||||++.||..||||||+ |+|+.++...... ....
T Consensus 23 ~~is~~el~~~l~~~~~~~~~~~~liDvR~~~e~~~ghIpgAi--------nip~~~~~~~~~~---~~~~--------- 82 (161)
T 1c25_A 23 KYISPEIMASVLNGKFANLIKEFVIIDCRYPYEYEGGHIKGAV--------NLHMEEEVEDFLL---KKPI--------- 82 (161)
T ss_dssp CEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCE--------ECCSHHHHHHHTT---TSCC---------
T ss_pred ceeCHHHHHHHHhccccccCCCeEEEECCChHHccCCcccCcE--------eCChhHHHHHHHh---hhhh---------
Confidence 479999999999643 47899999999999999999999 9998665332100 0000
Q ss_pred HhhhcccCCCceE--EEEeC-CCchHHHHHHHHHHc----------cCCCEEEecchHHHHHHcCCCcccc
Q 012218 345 IRNLKIVQDRSKV--IVMDA-DGTRSKGIARSLRKL----------GVMRAFLVQGGFQSWVKEGLRIKEL 402 (468)
Q Consensus 345 I~~Lk~l~kd~~I--VVyC~-sG~RS~~AA~~L~~~----------Gf~nV~vLdGG~~aW~~aGLPv~~~ 402 (468)
..+++++| |+||+ +|.||..+++.|++. ||++|++|+||+.+|.+++.|+...
T Consensus 83 -----~~~~~~~ivvv~yC~~sg~rs~~aa~~L~~~~~~~~~l~~~G~~~v~~l~GG~~~W~~~~~~~~~~ 148 (161)
T 1c25_A 83 -----VPTDGKRVIVVFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKGGYKEFFMKCQSYCEP 148 (161)
T ss_dssp -----CCCTTSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSSCCEEEETTHHHHHHHHHGGGEES
T ss_pred -----ccCCCCCeEEEEEcCCCCcchHHHHHHHHHHHHhhhhccccCCceEEEEcCCHHHHHHHcccccCC
Confidence 01467776 67899 999999999999864 9999999999999999999998875
No 40
>2vsw_A Dual specificity protein phosphatase 16; hydrolase, dual specificity phosphatase, nucleus, cytoplasm, rhodanese domain, CAsp8; 2.20A {Homo sapiens} PDB: 3tg3_A
Probab=99.72 E-value=1.5e-18 Score=154.99 Aligned_cols=122 Identities=17% Similarity=0.203 Sum_probs=85.8
Q ss_pred cccCHHHHHHHHhC-CCCcEEEEcCChhhHhhcCCCCCcccccccccccCccccc-chhhhhhcCchhhHHHHHHHHHhh
Q 012218 270 GDLSPKSTLELLRG-KENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVG-GSVKKLLRGGRELDDTLTAAVIRN 347 (468)
Q Consensus 270 ~~ISp~el~elL~~-~~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~-~~l~~ll~~~~~L~~~l~alGI~~ 347 (468)
..|+++++.+++++ +++++|||||++.||..||||||+ |+|+..+. .+... +...+..++.......
T Consensus 4 ~~Is~~~l~~~l~~~~~~~~iiDvR~~~ey~~gHIpgAi--------nip~~~l~~~~~~~---~~~~~~~ll~~~~~~~ 72 (153)
T 2vsw_A 4 TQIVTERLVALLESGTEKVLLIDSRPFVEYNTSHILEAI--------NINCSKLMKRRLQQ---DKVLITELIQHSAKHK 72 (153)
T ss_dssp EEECHHHHHHHHTSTTCCEEEEECSCHHHHHHCEETTCE--------ECCCCHHHHHHHHT---TSSCHHHHHHHSCSSC
T ss_pred ccccHHHHHHHHhcCCCCEEEEECCCHHHhccCccCCCe--------eeChHHHHHhhhhc---CCcCHHHhcCchhhhh
Confidence 47999999999963 467999999999999999999999 99987652 21110 0000111110000000
Q ss_pred hcccCCCceEEEEeCCCchHHHH------HHHHHHc--cCCCEEEecchHHHHHHcCCCccccc
Q 012218 348 LKIVQDRSKVIVMDADGTRSKGI------ARSLRKL--GVMRAFLVQGGFQSWVKEGLRIKELK 403 (468)
Q Consensus 348 Lk~l~kd~~IVVyC~sG~RS~~A------A~~L~~~--Gf~nV~vLdGG~~aW~~aGLPv~~~~ 403 (468)
+ .++++++|||||++|.|+..+ ++.|+.+ ||++|++|+||+.+|.+.+.++....
T Consensus 73 ~-~~~~~~~iVvyc~~g~~s~~a~~~~~~~~~L~~l~~G~~~v~~L~GG~~~W~~~~~~~~~~~ 135 (153)
T 2vsw_A 73 V-DIDCSQKVVVYDQSSQDVASLSSDCFLTVLLGKLEKSFNSVHLLAGGFAEFSRCFPGLCEGK 135 (153)
T ss_dssp C-CCCTTSEEEEECSSCCCGGGSCTTSHHHHHHHHHHHHCSCEEEETTHHHHHHHHCGGGEEC-
T ss_pred h-ccCCCCeEEEEeCCCCcccccccchHHHHHHHHHHhCCCcEEEEeChHHHHHHhChhhhcCC
Confidence 0 136789999999999988765 5777744 99999999999999999877766553
No 41
>2ouc_A Dual specificity protein phosphatase 10; rhodanese fold, hydrolase; 2.20A {Homo sapiens}
Probab=99.71 E-value=8.5e-18 Score=146.40 Aligned_cols=120 Identities=17% Similarity=0.223 Sum_probs=80.5
Q ss_pred ccCHHHHHH--------HHhCCCCcEEEEcCChhhHhhcCCCCCcccccccccccCcccccchhhhhhcCchhhHHHHHH
Q 012218 271 DLSPKSTLE--------LLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTA 342 (468)
Q Consensus 271 ~ISp~el~e--------lL~~~~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l~a 342 (468)
.|+++++.+ ++ ++++.+|||||++.||..||||||+ |+|+.++..... +.+....+...+..
T Consensus 2 ~Is~~~l~~~l~~~~~~~l-~~~~~~iiDvR~~~e~~~ghIpgA~--------~ip~~~~~~~~~-~~~~~~~~~~~~~~ 71 (142)
T 2ouc_A 2 IIYPNDLAKKMTKCSKSHL-PSQGPVIIDCRPFMEYNKSHIQGAV--------HINCADKISRRR-LQQGKITVLDLISC 71 (142)
T ss_dssp EECHHHHHHHHHC-----------CEEEECSCHHHHHHEEETTCE--------ECCCSSHHHHHH-HHTTSSCHHHHHHT
T ss_pred ccCHHHHHHHHHhcccccC-CCCCCEEEEeCCHHHhhhhhccCcc--------ccCccHHHHHHH-hhcCCcchhhhCCC
Confidence 489999998 54 3457899999999999999999999 899876532111 00011111111110
Q ss_pred HHH-hhhcccCCCceEEEEeCCCchH---------HHHHHHHHHccCCCEEEecchHHHHHHcCCCcccc
Q 012218 343 AVI-RNLKIVQDRSKVIVMDADGTRS---------KGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKEL 402 (468)
Q Consensus 343 lGI-~~Lk~l~kd~~IVVyC~sG~RS---------~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv~~~ 402 (468)
.+. ..++.. ++++||+||++|.++ ..++..|...|| +|++|+||+.+|.++|.|+...
T Consensus 72 ~~~~~~~~~~-~~~~ivvyc~~g~~~~~~~~~~~~~~~~~~L~~~G~-~v~~l~GG~~~w~~~g~~~~~~ 139 (142)
T 2ouc_A 72 REGKDSFKRI-FSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQNHENLCDN 139 (142)
T ss_dssp TSCTTHHHHH-HHSCEEEECSSCCCGGGCCTTSHHHHHHHHHHHTTC-CCEEETTHHHHHTTTCGGGEEE
T ss_pred hhhhHHHhcc-CCCcEEEEECCCCchhhcCcccHHHHHHHHHHHcCC-cEEEEccCHHHHHHHCHHhhcc
Confidence 000 000000 267899999999875 457788999999 9999999999999999998765
No 42
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.71 E-value=3.7e-18 Score=175.18 Aligned_cols=115 Identities=19% Similarity=0.225 Sum_probs=97.9
Q ss_pred cccCHHHHHHHHhCCCCcEEEEcCC--------hhhHhhcCCCCCcccccccccccCccc-ccch-----hhhhhcCchh
Q 012218 270 GDLSPKSTLELLRGKENAVLIDVRH--------EDLRERDGIPDLRRGARFRYASVYLPE-VGGS-----VKKLLRGGRE 335 (468)
Q Consensus 270 ~~ISp~el~elL~~~~~avLIDVRs--------~~Ey~~gHIPGA~~a~~~~~~nIPl~e-l~~~-----l~~ll~~~~~ 335 (468)
..|+++++.+++++ ++|||||+ +.||..||||||+ |+|+.. +... ...++++++.
T Consensus 14 ~~Is~~el~~~l~~---~~iIDvR~~~~~~~~~~~ey~~gHIpGAi--------~ip~~~~l~~~~~~~~~~~~lp~~~~ 82 (373)
T 1okg_A 14 VFLDPSEVADHLAE---YRIVDCRYSLKIKDHGSIQYAKEHVKSAI--------RADVDTNLSKLVPTSTARHPLPPXAE 82 (373)
T ss_dssp CEECHHHHTTCGGG---SEEEECCCCSSSTTTTTTHHHHCEETTCE--------ECCTTTTSCCCCTTCCCSSCCCCHHH
T ss_pred cEEcHHHHHHHcCC---cEEEEecCCccccccchhHHhhCcCCCCE--------EeCchhhhhcccccCCccccCCCHHH
Confidence 47999999998842 89999998 6999999999999 888764 5432 2345667777
Q ss_pred hHHHHHHHHHhhhcccCCCceEEEEe-CCCchHH-HHHHHHHHccCCCEEEecchHHHHHHcCCCcccc
Q 012218 336 LDDTLTAAVIRNLKIVQDRSKVIVMD-ADGTRSK-GIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKEL 402 (468)
Q Consensus 336 L~~~l~alGI~~Lk~l~kd~~IVVyC-~sG~RS~-~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv~~~ 402 (468)
+.+.+..+|+ +++++||+|| ++|.|+. ++++.|+.+|| +|++|+||+.+|+++|+|++..
T Consensus 83 f~~~l~~~gi------~~d~~VVvYc~~~G~rsa~ra~~~L~~~G~-~V~~L~GG~~aW~~~g~pv~~~ 144 (373)
T 1okg_A 83 FIDWCMANGM------AGELPVLCYDDECGAMGGCRLWWMLNSLGA-DAYVINGGFQACKAAGLEMESG 144 (373)
T ss_dssp HHHHHHHTTC------SSSSCEEEECSSTTTTTHHHHHHHHHHHTC-CEEEETTTTHHHHTTTCCEECS
T ss_pred HHHHHHHcCC------CCCCeEEEEeCCCCchHHHHHHHHHHHcCC-eEEEeCCCHHHHHhhcCCcccC
Confidence 8877877777 7899999999 7888886 99999999999 9999999999999999999876
No 43
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.71 E-value=9e-18 Score=179.28 Aligned_cols=197 Identities=14% Similarity=0.172 Sum_probs=139.7
Q ss_pred chhHHHHHHHHHHh--hhhcccCcceEEEeeccCCCCCCCchHHHhhhhh------HhhhhhcccccchHHHHHHHHHHH
Q 012218 160 VAAVDVLRNTIVAL--EESMTNGASFVVYYYGTTKESLPPEIRDALNLYE------DRAVKLWRPVGSALQQVSVAIEGL 231 (468)
Q Consensus 160 ~~~~d~l~~~~~~~--~~~~~~~~~~~~~~~G~~~~~l~p~~~~~~~~~e------~~~~~v~~p~g~~~~q~~~~ie~l 231 (468)
.++.+.|++.+..- +-.+.|.|+.-.|.-||++..+.-...++....+ ++-..++|--|.....+... |
T Consensus 266 ~is~~~l~~~~~~~~~~~~liDvR~~~ey~~ghIpgAinip~~~l~~~~~~~~~~~~~~ivv~c~~g~rs~~aa~~---L 342 (539)
T 1yt8_A 266 RLDLAGLAQWQDEHDRTTYLLDVRTPEEYEAGHLPGSRSTPGGQLVQETDHVASVRGARLVLVDDDGVRANMSASW---L 342 (539)
T ss_dssp EECHHHHHHHHHCTTSCEEEEECSCHHHHHHCBCTTCEECCHHHHHHSHHHHCCSBTCEEEEECSSSSHHHHHHHH---H
T ss_pred eECHHHHHHHHhCCCCCeEEEECCCHHHHhcCCCCCCEeCCHHHHHHHHHhhcCCCCCeEEEEeCCCCcHHHHHHH---H
Confidence 45677777766432 2358999999999999999877655555443322 22333455555555544433 3
Q ss_pred HHhcCCCCCCCcchHHHHHh-hhHHHHHHHHHHHhCCC----------CcccCHHHHHHHHhCCCCcEEEEcCChhhHhh
Q 012218 232 ERSLGFDPNDPIVPFVVFLG-TSATLWIFYWWWTYGGY----------SGDLSPKSTLELLRGKENAVLIDVRHEDLRER 300 (468)
Q Consensus 232 e~~lgf~~~~PvL~~~~~vg-~~aal~l~~~l~~~~~y----------~~~ISp~el~elL~~~~~avLIDVRs~~Ey~~ 300 (468)
+. +|+ +-.+| -| ...+ |...++ ...|+++++.+++. +++.+|||||++.||+.
T Consensus 343 ~~-~G~--~v~~l-----~G~G~~~-------w~~~g~p~~~~~~~~~~~~i~~~~l~~~l~-~~~~~liDvR~~~e~~~ 406 (539)
T 1yt8_A 343 AQ-MGW--QVAVL-----DGLSEAD-------FSERGAWSAPLPRQPRADTIDPTTLADWLG-EPGTRVLDFTASANYAK 406 (539)
T ss_dssp HH-TTC--EEEEE-----CSCCGGG-------CCBCSSCCCCCCCCCCCCEECHHHHHHHTT-STTEEEEECSCHHHHHH
T ss_pred HH-cCC--eEEEe-----cCCChHH-------HHHhhccccCCCCCCcCCccCHHHHHHHhc-CCCeEEEEeCCHHHhhc
Confidence 32 466 11111 22 1111 212111 24799999999984 46799999999999999
Q ss_pred cCCCCCcccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhcccCCCceEEEEeCCCchHHHHHHHHHHccCC
Q 012218 301 DGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVM 380 (468)
Q Consensus 301 gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l~alGI~~Lk~l~kd~~IVVyC~sG~RS~~AA~~L~~~Gf~ 380 (468)
||||||+ |+|..++...+.+ ++++++||+||++|.||..+++.|+.+||+
T Consensus 407 ghIpgA~--------~ip~~~l~~~l~~----------------------l~~~~~ivv~C~sG~rs~~aa~~L~~~G~~ 456 (539)
T 1yt8_A 407 RHIPGAA--------WVLRSQLKQALER----------------------LGTAERYVLTCGSSLLARFAVAEVQALSGK 456 (539)
T ss_dssp CBCTTCE--------ECCGGGHHHHHHH----------------------HCCCSEEEEECSSSHHHHHHHHHHHHHHCS
T ss_pred CcCCCch--------hCCHHHHHHHHHh----------------------CCCCCeEEEEeCCChHHHHHHHHHHHcCCC
Confidence 9999999 8888766543321 278899999999999999999999999999
Q ss_pred CEEEecchHHHHHHcCCCccccccc
Q 012218 381 RAFLVQGGFQSWVKEGLRIKELKSE 405 (468)
Q Consensus 381 nV~vLdGG~~aW~~aGLPv~~~~~~ 405 (468)
+|++|+||+.+|.++|+|++++.+.
T Consensus 457 ~v~~l~GG~~~W~~~g~pv~~~~~~ 481 (539)
T 1yt8_A 457 PVFLLDGGTSAWVAAGLPTEDGESL 481 (539)
T ss_dssp CEEEETTHHHHHHHTTCCCBCSSCC
T ss_pred CEEEeCCcHHHHHhCCCCcccCCCC
Confidence 9999999999999999999987443
No 44
>2j6p_A SB(V)-AS(V) reductase; arsenate reductase, antimonate reductase, CDC25 phosphatase, rhodanese, C-MYC epitope, oxidoreductase; HET: EPE; 2.15A {Leishmania major}
Probab=99.71 E-value=1.9e-17 Score=149.14 Aligned_cols=108 Identities=19% Similarity=0.217 Sum_probs=83.3
Q ss_pred cccCHHHHHHHHhCC---CCcEEEEcCChhhHhhcCCCCCcccccccccccCcccccc-hhhhhhcCchhhHHHHHHHHH
Q 012218 270 GDLSPKSTLELLRGK---ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGG-SVKKLLRGGRELDDTLTAAVI 345 (468)
Q Consensus 270 ~~ISp~el~elL~~~---~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~-~l~~ll~~~~~L~~~l~alGI 345 (468)
..|+++++.++++++ ++++|||||++ ||..||||||+ |+|+.++.. .+.+ +.+.+ .-
T Consensus 5 ~~Is~~el~~~l~~~~~~~~~~lIDvR~~-ey~~gHIpGAi--------nip~~~l~~~~~~~-------l~~~l---~~ 65 (152)
T 2j6p_A 5 TYIKPEELVELLDNPDSLVKAAVIDCRDS-DRDCGFIVNSI--------NMPTISCTEEMYEK-------LAKTL---FE 65 (152)
T ss_dssp EEECHHHHHHHHHSHHHHHTEEEEECCST-TGGGCBCTTCE--------ECCTTTCCHHHHHH-------HHHHH---HH
T ss_pred CccCHHHHHHHHhCCCCCCCEEEEEcCcH-HhCcCcCCCcE--------ECChhHhhHHHHHH-------HHHHh---cc
Confidence 369999999998642 37899999999 99999999999 999876653 2211 11111 10
Q ss_pred hhhcccCCCceEEEEe-CCCchHHHHH----HHHHHccC--CCEEEecchHHHHHHcCCCcccc
Q 012218 346 RNLKIVQDRSKVIVMD-ADGTRSKGIA----RSLRKLGV--MRAFLVQGGFQSWVKEGLRIKEL 402 (468)
Q Consensus 346 ~~Lk~l~kd~~IVVyC-~sG~RS~~AA----~~L~~~Gf--~nV~vLdGG~~aW~~aGLPv~~~ 402 (468)
...+.||+|| .+|.|+..++ +.|++.|| ++|++|+||+.+|.++|.++...
T Consensus 66 ------~~~~~vV~yC~~sg~rs~~aa~~~~~~L~~~G~~~~~v~~L~GG~~~W~~~g~~~~~~ 123 (152)
T 2j6p_A 66 ------EKKELAVFHCAQSLVRAPKGANRFALAQKKLGYVLPAVYVLRGGWEAFYHMYGDVRPD 123 (152)
T ss_dssp ------TTCCEEEEECSSSSSHHHHHHHHHHHHHHHHTCCCSEEEEETTHHHHHHHHHTTTCGG
T ss_pred ------cCCCEEEEEcCCCCCccHHHHHHHHHHHHHcCCCCCCEEEEcCcHHHHHHHcCCCCCC
Confidence 2334677789 7999998888 77888997 58999999999999999988653
No 45
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=99.70 E-value=3.1e-17 Score=175.14 Aligned_cols=106 Identities=19% Similarity=0.196 Sum_probs=92.5
Q ss_pred cccCHHHHHHHHhCCCCcEEEEcCChhhHhhcCCCCCcccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhc
Q 012218 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (468)
Q Consensus 270 ~~ISp~el~elL~~~~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l~alGI~~Lk 349 (468)
..|+++++.+++.++++++|||||++.||..+|||||+ |+|+..+...+..+ +
T Consensus 7 ~~is~~~l~~~l~~~~~~~liDvR~~~e~~~ghIpgAv--------~ip~~~~~~~~~~l--------------~----- 59 (539)
T 1yt8_A 7 AVRTFHDIRAALLARRELALLDVREEDPFAQAHPLFAA--------NLPLSRLELEIHAR--------------V----- 59 (539)
T ss_dssp EEECHHHHHHHHHHTCCBEEEECSCHHHHTTSBCTTCE--------ECCGGGHHHHHHHH--------------S-----
T ss_pred cccCHHHHHHHHhCCCCeEEEECCCHHHHhcCcCCCCE--------ECCHHHHHHHHHhh--------------C-----
Confidence 46999999999965568999999999999999999999 99987765443322 1
Q ss_pred ccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCccccc
Q 012218 350 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELK 403 (468)
Q Consensus 350 ~l~kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv~~~~ 403 (468)
.+++++||+||++|.+|.++++.|+.+||++|++|+||+.+|+++|+|++++.
T Consensus 60 -~~~~~~iVvyc~~g~~s~~a~~~L~~~G~~~V~~L~GG~~~W~~~g~p~~~~~ 112 (539)
T 1yt8_A 60 -PRRDTPITVYDDGEGLAPVAAQRLHDLGYSDVALLDGGLSGWRNAGGELFRDV 112 (539)
T ss_dssp -CCTTSCEEEECSSSSHHHHHHHHHHHTTCSSEEEETTHHHHHHHTTCCCBCSS
T ss_pred -CCCCCeEEEEECCCChHHHHHHHHHHcCCCceEEeCCCHHHHHhcCCCcccCC
Confidence 15789999999999999999999999999999999999999999999998764
No 46
>1qb0_A Protein (M-phase inducer phosphatase 2 (CDC25B)); hydrolase, cell cycle phosphatase, dual specificity protein phosphatase; 1.91A {Homo sapiens} SCOP: c.46.1.1 PDB: 1cwr_A 1cws_A 2uzq_A
Probab=99.69 E-value=7.1e-17 Score=153.06 Aligned_cols=108 Identities=21% Similarity=0.273 Sum_probs=86.7
Q ss_pred cccCHHHHHHHHhCC-----CCcEEEEcCChhhHhhcCCCCCcccccccccccCcccccch-hhhhhcCchhhHHHHHHH
Q 012218 270 GDLSPKSTLELLRGK-----ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGS-VKKLLRGGRELDDTLTAA 343 (468)
Q Consensus 270 ~~ISp~el~elL~~~-----~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~~-l~~ll~~~~~L~~~l~al 343 (468)
..|+++++.++++++ ++++|||||++.||..||||||+ |+|+.++... +.. ...+
T Consensus 44 ~~Is~~el~~~l~~~~~~~~~~~~lIDvR~~~Ey~~gHIpGAi--------nip~~~l~~~~~~~----~~~l------- 104 (211)
T 1qb0_A 44 KYISPETMVALLTGKFSNIVDKFVIVDCRYPYEYEGGHIKTAV--------NLPLERDAESFLLK----SPIA------- 104 (211)
T ss_dssp CEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTCEETTCE--------ECCSHHHHHHHHHT----TTCC-------
T ss_pred CeeCHHHHHHHHhcccccCCCCEEEEECCCHHHHccCcCCCCE--------ECCchHHHHHhhhh----hhhc-------
Confidence 479999999999543 37899999999999999999999 9998665332 110 0000
Q ss_pred HHhhhcccCCCceE--EEEeC-CCchHHHHHHHHHH----------ccCCCEEEecchHHHHHHcCCCcccc
Q 012218 344 VIRNLKIVQDRSKV--IVMDA-DGTRSKGIARSLRK----------LGVMRAFLVQGGFQSWVKEGLRIKEL 402 (468)
Q Consensus 344 GI~~Lk~l~kd~~I--VVyC~-sG~RS~~AA~~L~~----------~Gf~nV~vLdGG~~aW~~aGLPv~~~ 402 (468)
..+++++| |+||+ +|.||..+++.|++ +||++|++|+||+.+|.++|.|+...
T Consensus 105 ------~~~~d~~ivvVvyC~~sG~rs~~aa~~L~~~~~~~~~l~~~G~~~V~~L~GG~~~W~~~g~~~~~~ 170 (211)
T 1qb0_A 105 ------PCSLDKRVILIFHCEFSSERGPRMCRFIRERDRAVNDYPSLYYPEMYILKGGYKEFFPQHPNFCEP 170 (211)
T ss_dssp ------CSSTTSEEEEEEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEES
T ss_pred ------cccCCCCeEEEEECCCCCccHHHHHHHHHhhhhhhhhhhhcCCCeEEEECCHHHHHHHHCccccCC
Confidence 01367887 78899 99999999999986 69999999999999999999998764
No 47
>4f67_A UPF0176 protein LPG2838; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium; 1.79A {Legionella pneumophila subsp}
Probab=99.67 E-value=1e-16 Score=158.24 Aligned_cols=103 Identities=14% Similarity=0.235 Sum_probs=86.0
Q ss_pred cccCHHHHHHHHhCCCCcEEEEcCChhhHhhcCCCCCcccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhc
Q 012218 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLK 349 (468)
Q Consensus 270 ~~ISp~el~elL~~~~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l~alGI~~Lk 349 (468)
..|+++++.++++ +++++|||||++.||+.||||||+ |+|+..+.+.... +.+ .+.
T Consensus 122 ~~Is~~el~~ll~-~~~~vlIDVR~~~Ey~~GHIpGAi--------niP~~~~~~~~~~-------l~~---~l~----- 177 (265)
T 4f67_A 122 TYLSPEEWHQFIQ-DPNVILLDTRNDYEYELGTFKNAI--------NPDIENFREFPDY-------VQR---NLI----- 177 (265)
T ss_dssp CEECHHHHHHHTT-CTTSEEEECSCHHHHHHEEETTCB--------CCCCSSGGGHHHH-------HHH---HTG-----
T ss_pred ceECHHHHHHHhc-CCCeEEEEeCCchHhhcCcCCCCE--------eCCHHHHHhhHHH-------HHH---hhh-----
Confidence 4799999999984 568999999999999999999999 9998777543221 111 111
Q ss_pred ccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCC
Q 012218 350 IVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGL 397 (468)
Q Consensus 350 ~l~kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGL 397 (468)
.+++++||+||.+|.||..+++.|+..||++|++|+||+.+|.+..-
T Consensus 178 -~~kdk~IVvyC~~G~RS~~Aa~~L~~~Gf~nV~~L~GGi~aW~~~~~ 224 (265)
T 4f67_A 178 -DKKDKKIAMFCTGGIRCEKTTAYMKELGFEHVYQLHDGILNYLESIP 224 (265)
T ss_dssp -GGTTSCEEEECSSSHHHHHHHHHHHHHTCSSEEEETTHHHHHHHHSC
T ss_pred -hCCCCeEEEEeCCChHHHHHHHHHHHcCCCCEEEecCHHHHHHHhcC
Confidence 16789999999999999999999999999999999999999998643
No 48
>3f4a_A Uncharacterized protein YGR203W; protein phosphatase, rhodanese-like family, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.80A {Saccharomyces cerevisiae} PDB: 3fs5_A*
Probab=99.67 E-value=6.6e-17 Score=148.88 Aligned_cols=113 Identities=17% Similarity=0.152 Sum_probs=84.6
Q ss_pred cccCHHHHHHHHhCCC------CcEEEEcCChhhHhhcCCCCCcccccccccccCcccccch---hhhhhcCchhhHHHH
Q 012218 270 GDLSPKSTLELLRGKE------NAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGS---VKKLLRGGRELDDTL 340 (468)
Q Consensus 270 ~~ISp~el~elL~~~~------~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~~---l~~ll~~~~~L~~~l 340 (468)
..|+++++.+++++++ +++|||||+ .||..||||||+ |+|+.++... +.+ +.+.+
T Consensus 31 ~~Is~~eL~~~l~~~~~~~~~~~~~iIDVR~-~Ey~~GHIpGAi--------niP~~~l~~~~~~l~~-------l~~~~ 94 (169)
T 3f4a_A 31 KYLDPTELHRWMQEGHTTTLREPFQVVDVRG-SDYMGGHIKDGW--------HYAYSRLKQDPEYLRE-------LKHRL 94 (169)
T ss_dssp EEECHHHHHHHHHHTSCTTTCCCEEEEECCS-TTCTTCEETTCE--------ECCHHHHHHCHHHHHH-------HHHHH
T ss_pred cEeCHHHHHHHHhcCCccCcCCCEEEEECCc-hHHccCcCCCCE--------ECCHHHhhcccccHHH-------HHHHH
Confidence 4799999999996443 599999999 999999999999 9998777543 222 22212
Q ss_pred HHHHHhhhcccCCCceEEEEeCCC-chHHHHHHHHHH----cc--CCCEEEecchHHHHHHcCCCcccc
Q 012218 341 TAAVIRNLKIVQDRSKVIVMDADG-TRSKGIARSLRK----LG--VMRAFLVQGGFQSWVKEGLRIKEL 402 (468)
Q Consensus 341 ~alGI~~Lk~l~kd~~IVVyC~sG-~RS~~AA~~L~~----~G--f~nV~vLdGG~~aW~~aGLPv~~~ 402 (468)
...++. ..++++|||||++| .|+..++.+|.+ .| +.+|++|+|||.+|.+++.|....
T Consensus 95 ~~~~~~----~~~~~~IVvyC~sG~~Rs~~aa~~l~~~L~~~G~~~~~V~~L~GG~~aW~~~~~~~~~~ 159 (169)
T 3f4a_A 95 LEKQAD----GRGALNVIFHCMLSQQRGPSAAMLLLRSLDTAELSRCRLWVLRGGFSRWQSVYGDDESV 159 (169)
T ss_dssp HHHHHT----SSSCEEEEEECSSSSSHHHHHHHHHHHTCCHHHHTTEEEEEETTHHHHHHHHHTTCTTT
T ss_pred Hhhccc----ccCCCeEEEEeCCCCCcHHHHHHHHHHHHHHcCCCCCCEEEECCCHHHHHHHcCCcccc
Confidence 222221 02247999999997 799988877654 36 579999999999999998876543
No 49
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=99.66 E-value=7.5e-17 Score=167.04 Aligned_cols=117 Identities=16% Similarity=0.181 Sum_probs=94.0
Q ss_pred cCHHHHHHHHhCCCCcEEEEcCChhhH-----------hhcCCCCCcccccccccccCcc-------cccchhhhhhcCc
Q 012218 272 LSPKSTLELLRGKENAVLIDVRHEDLR-----------ERDGIPDLRRGARFRYASVYLP-------EVGGSVKKLLRGG 333 (468)
Q Consensus 272 ISp~el~elL~~~~~avLIDVRs~~Ey-----------~~gHIPGA~~a~~~~~~nIPl~-------el~~~l~~ll~~~ 333 (468)
|+++++.+++. +++.+|||||++.|| +.||||||+ |+|+. ++.... ..++++
T Consensus 274 i~~~e~~~~l~-~~~~~liDvR~~~e~~G~~~~~~~~~~~GhIpgAi--------~ip~~~~~~~~~~~~~~~-~~~~~~ 343 (423)
T 2wlr_A 274 LDMEQARGLLH-RQDASLVSIRSWPEFIGTTSGYSYIKPKGEIAGAR--------WGHAGSDSTHMEDFHNPD-GTMRSA 343 (423)
T ss_dssp ECHHHHHTTTT-CSSEEEEECSCHHHHHTSCCSSTTCCCCSEETTCE--------ECCCCSSTTCCGGGBCTT-SSBCCH
T ss_pred ecHHHHHHHhc-CCCceEEecCchhheeeeccCCCCCCcCCCCCCcc--------ccccccccccHHHHcCCC-CcCCCH
Confidence 78889988874 467899999999999 899999998 55543 332211 223445
Q ss_pred hhhHHHHHHHHHhhhcccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHH-cCCCcccccc
Q 012218 334 RELDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVK-EGLRIKELKS 404 (468)
Q Consensus 334 ~~L~~~l~alGI~~Lk~l~kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~-aGLPv~~~~~ 404 (468)
+++.+.+...++ +++++||+||++|.||..++..|+.+||++|++|+|||.+|.+ .|+|++++.+
T Consensus 344 ~~l~~~~~~~~~------~~~~~ivvyC~sG~rs~~aa~~L~~~G~~~v~~~~GG~~~W~~~~~~Pv~~~~~ 409 (423)
T 2wlr_A 344 DDITAMWKAWNI------KPEQQVSFYCGTGWRASETFMYARAMGWKNVSVYDGGWYEWSSDPKNPVATGER 409 (423)
T ss_dssp HHHHHHHHTTTC------CTTSEEEEECSSSHHHHHHHHHHHHTTCSSEEEESSHHHHHTTSTTSCEECSSC
T ss_pred HHHHHHHHHcCC------CCCCcEEEECCcHHHHHHHHHHHHHcCCCCcceeCccHHHHhcCCCCCcccCCC
Confidence 556655544444 7899999999999999999999999999999999999999998 9999998754
No 50
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.66 E-value=1.4e-16 Score=151.51 Aligned_cols=99 Identities=26% Similarity=0.308 Sum_probs=81.7
Q ss_pred ccCHHHHHHHHhCCCCcEEEEcCChhhHhh----------cCCCCCcccccccccccCcccccchhhhhhcCchhhHHHH
Q 012218 271 DLSPKSTLELLRGKENAVLIDVRHEDLRER----------DGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTL 340 (468)
Q Consensus 271 ~ISp~el~elL~~~~~avLIDVRs~~Ey~~----------gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l 340 (468)
.++++++.+ +.+|||+|++.||.. ||||||+ |+|+.++.... +.+
T Consensus 122 ~i~~~e~~~------~~~liDvR~~~e~~~~~~~~~~~~~ghIpgA~--------~ip~~~~~~~~-----------e~~ 176 (230)
T 2eg4_A 122 LLTADEAAR------HPLLLDVRSPEEFQGKVHPPCCPRGGRIPGSK--------NAPLELFLSPE-----------GLL 176 (230)
T ss_dssp BCCHHHHHT------CSCEEECSCHHHHTTSCCCTTSSSCCBCTTCE--------ECCGGGGGCCT-----------THH
T ss_pred eeCHHHHhh------CCeEEeCCCHHHcCcccCCCCCccCCCCCCcE--------EcCHHHhCChH-----------HHH
Confidence 366666544 678999999999999 9999999 99987764421 012
Q ss_pred HHHHHhhhcccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCccc
Q 012218 341 TAAVIRNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKE 401 (468)
Q Consensus 341 ~alGI~~Lk~l~kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv~~ 401 (468)
...++ +++++||+||++|.||..++..|+.+| ++|++|+|||.+|.+.|+|+++
T Consensus 177 ~~~~~------~~~~~iv~~C~~G~rs~~a~~~L~~~G-~~v~~~~Gg~~~W~~~g~p~~~ 230 (230)
T 2eg4_A 177 ERLGL------QPGQEVGVYCHSGARSAVAFFVLRSLG-VRARNYLGSMHEWLQEGLPTEP 230 (230)
T ss_dssp HHHTC------CTTCEEEEECSSSHHHHHHHHHHHHTT-CEEEECSSHHHHHHHTTCCCBC
T ss_pred HhcCC------CCCCCEEEEcCChHHHHHHHHHHHHcC-CCcEEecCcHHHHhhcCCCCCC
Confidence 22233 789999999999999999999999999 8999999999999999999863
No 51
>1hzm_A Dual specificity protein phosphatase 6; hydrolase; NMR {Homo sapiens} SCOP: c.46.1.1
Probab=99.64 E-value=5.5e-17 Score=144.62 Aligned_cols=108 Identities=26% Similarity=0.358 Sum_probs=78.9
Q ss_pred cccCHHHHHHHHhCC-CCcEEEEcCChhhHhhcCCCCCcccccccccccCccccc------c--hhhhhhcCchhhHHHH
Q 012218 270 GDLSPKSTLELLRGK-ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVG------G--SVKKLLRGGRELDDTL 340 (468)
Q Consensus 270 ~~ISp~el~elL~~~-~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~------~--~l~~ll~~~~~L~~~l 340 (468)
..|+++++.++++++ ++.+|||||++.||..||||||+ |+|++.+. + .+...++++... +.+
T Consensus 16 ~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHIpgAi--------nip~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~ 86 (154)
T 1hzm_A 16 ISKTVAWLNEQLELGNERLLLMDCRPQELYESSHIESAI--------NVAIPGIMLRRLQKGNLPVRALFTRGEDR-DRF 86 (154)
T ss_dssp SBSCCCCHHHHHHHCSSSCEEECCSTTHHHHHHTSSSCC--------CCCCSSHHHHTBCCSCCCTTTTSTTSHHH-HHH
T ss_pred cccCHHHHHHHHhCCCCCEEEEEcCCHHHHhhccccCce--------EeCccHHHHhhhhcCcccHHHhCCCHHHH-HHH
Confidence 468999999988533 37899999999999999999999 88876542 1 112233322211 111
Q ss_pred HHHHHhhhcccCCCceEEEEeCCCchH-------HHHHHHHHHc---cCCCEEEecchHHHHHHc
Q 012218 341 TAAVIRNLKIVQDRSKVIVMDADGTRS-------KGIARSLRKL---GVMRAFLVQGGFQSWVKE 395 (468)
Q Consensus 341 ~alGI~~Lk~l~kd~~IVVyC~sG~RS-------~~AA~~L~~~---Gf~nV~vLdGG~~aW~~a 395 (468)
..++++++||+||.+|.++ ..+++.|+.+ ||+ |++|+||+.+|.+.
T Consensus 87 --------~~~~~~~~iVvyc~~g~~~~~~~~aa~~~~~~l~~l~~~G~~-v~~L~GG~~~W~~~ 142 (154)
T 1hzm_A 87 --------TRRCGTDTVVLYDESSSDWNENTGGESLLGLLLKKLKDEGCR-AFYLEGGFSKFQAE 142 (154)
T ss_dssp --------HHSTTSSCEEECCCSSSSSCSCSSCCSHHHHHHHHHHHTTCC-CEECCCCHHHHHHH
T ss_pred --------hccCCCCeEEEEeCCCCccccccccchHHHHHHHHHHHCCCc-eEEEcChHHHHHHH
Confidence 1136788999999999875 4456677765 998 99999999999875
No 52
>3op3_A M-phase inducer phosphatase 3; structural genomics, structural genomics consortium, SGC, Al alpha sandwich, kinase, cytosol, hydrolase; 2.63A {Homo sapiens}
Probab=99.64 E-value=2.2e-16 Score=151.42 Aligned_cols=107 Identities=20% Similarity=0.265 Sum_probs=80.6
Q ss_pred cccCHHHHHHHHhCC-----CCcEEEEcCChhhHhhcCCCCCcccccccccccCccc-ccchhhhhhcCchhhHHHHHHH
Q 012218 270 GDLSPKSTLELLRGK-----ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPE-VGGSVKKLLRGGRELDDTLTAA 343 (468)
Q Consensus 270 ~~ISp~el~elL~~~-----~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~e-l~~~l~~ll~~~~~L~~~l~al 343 (468)
..|+++++.++++++ ++++|||||++.||..||||||+ |+|+.+ +...+.. ...+
T Consensus 57 ~~Is~~eL~~~l~~~~~~~~~~~~lIDVR~~~Ey~~GHIpGAi--------nIP~~~~l~~~l~~----~~~~------- 117 (216)
T 3op3_A 57 KYVNPETVAALLSGKFQGLIEKFYVIDCRYPYEYLGGHIQGAL--------NLYSQEELFNFFLK----KPIV------- 117 (216)
T ss_dssp EEECHHHHHHHHTTTTTTTEEEEEEEECSCHHHHHTSEETTCE--------ECCSHHHHHHHHTS----SCCC-------
T ss_pred CEeCHHHHHHHHhCCCccccCCEEEEEeCcHHHHhcCCccCCE--------ECChHHHHHHHHhh----cccc-------
Confidence 479999999999643 26899999999999999999999 999854 2221100 0000
Q ss_pred HHhhhcccCCCc--eEEEEeC-CCchHHHHHHHHHHc----------cCCCEEEecchHHHHHHcCCCccc
Q 012218 344 VIRNLKIVQDRS--KVIVMDA-DGTRSKGIARSLRKL----------GVMRAFLVQGGFQSWVKEGLRIKE 401 (468)
Q Consensus 344 GI~~Lk~l~kd~--~IVVyC~-sG~RS~~AA~~L~~~----------Gf~nV~vLdGG~~aW~~aGLPv~~ 401 (468)
..++++ +||+||+ +|.||..+++.|+.. ||++|++|+|||.+|.+..-.+..
T Consensus 118 ------~~~~~k~~~VVvyC~~SG~Rs~~aa~~L~~~~~~~~~y~~lGf~~V~~L~GG~~aW~~~~~~lce 182 (216)
T 3op3_A 118 ------PLDTQKRIIIVFHCEFSSERGPRMCRCLREEDRSLNQYPALYYPELYILKGGYRDFFPEYMELCE 182 (216)
T ss_dssp ------CSSTTSEEEEEEECCC--CCHHHHHHHHHHHHHHTSSTTCCSCCCEEEETTHHHHHTTTCGGGEE
T ss_pred ------ccccCCCCEEEEEeCCCChHHHHHHHHHHHcCcccccccccCCCcEEEECCcHHHHHHhCccccc
Confidence 012344 5999999 999999999999887 899999999999999987555443
No 53
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.61 E-value=6.1e-16 Score=163.53 Aligned_cols=96 Identities=20% Similarity=0.322 Sum_probs=84.1
Q ss_pred CCCcccCHHHHHHHHhCCCCcEEEEcCChhhHhhcCCCCCcccccccccccCcccccchhhhhhcCchhhHHHHHHHHHh
Q 012218 267 GYSGDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIR 346 (468)
Q Consensus 267 ~y~~~ISp~el~elL~~~~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l~alGI~ 346 (468)
+....|+++++.++ +++.+|||||++.||+.+|||||+ |+|+.++...+.+
T Consensus 470 ~~~~~i~~~~~~~~---~~~~~~iDvR~~~e~~~~~i~ga~--------~ip~~~l~~~~~~------------------ 520 (565)
T 3ntd_A 470 GDATPIHFDQIDNL---SEDQLLLDVRNPGELQNGGLEGAV--------NIPVDELRDRMHE------------------ 520 (565)
T ss_dssp TSCCEECTTTTTSC---CTTEEEEECSCGGGGGGCCCTTCE--------ECCGGGTTTSGGG------------------
T ss_pred cccceeeHHHHHhC---CCCcEEEEeCCHHHHhcCCCCCcE--------ECCHHHHHHHHhh------------------
Confidence 34457999998776 467999999999999999999999 9999877654332
Q ss_pred hhcccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcC
Q 012218 347 NLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEG 396 (468)
Q Consensus 347 ~Lk~l~kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~aG 396 (468)
++++++||+||++|.||..+++.|+++|| +|++|+|||.+|+++|
T Consensus 521 ----~~~~~~iv~~c~~g~rs~~a~~~l~~~G~-~v~~l~gG~~~w~~~g 565 (565)
T 3ntd_A 521 ----LPKDKEIIIFSQVGLRGNVAYRQLVNNGY-RARNLIGGYRTYKFAS 565 (565)
T ss_dssp ----SCTTSEEEEECSSSHHHHHHHHHHHHTTC-CEEEETTHHHHHHHTC
T ss_pred ----cCCcCeEEEEeCCchHHHHHHHHHHHcCC-CEEEEcChHHHHHhCc
Confidence 37889999999999999999999999999 9999999999999876
No 54
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=99.60 E-value=3.1e-16 Score=160.91 Aligned_cols=104 Identities=17% Similarity=0.167 Sum_probs=82.5
Q ss_pred CCcEEEEcCChhhHh-----------hcCCCCCcccccccccccCccccc--chhhhhhcCchhhHHHHHHH--HHhhhc
Q 012218 285 ENAVLIDVRHEDLRE-----------RDGIPDLRRGARFRYASVYLPEVG--GSVKKLLRGGRELDDTLTAA--VIRNLK 349 (468)
Q Consensus 285 ~~avLIDVRs~~Ey~-----------~gHIPGA~~a~~~~~~nIPl~el~--~~l~~ll~~~~~L~~~l~al--GI~~Lk 349 (468)
++.+|||||++.||. .||||||+ |+|+.++. ......+++++++.+.+.++ ++
T Consensus 173 ~~~~lIDvR~~~Ef~G~~~~~~~~~~~GhIpGAi--------niP~~~l~~~~~~~~~~~~~~~l~~~~~~~~~gi---- 240 (373)
T 1okg_A 173 PQAIITDARSADRFASTVRPYAADKMPGHIEGAR--------NLPYTSHLVTRGDGKVLRSEEEIRHNIMTVVQGA---- 240 (373)
T ss_dssp TTCCEEECSCHHHHTCCSSCCTTCSSSSCSTTCE--------ECCGGGGEECCSSSCEECCHHHHHHHHHTTCC------
T ss_pred cCceEEeCCCHHHccccccccccCCcCccCCCcE--------EecHHHhhccCCCCCccCCHHHHHHHHHhhhcCC----
Confidence 467899999999999 99999999 99987764 21111134455566655544 44
Q ss_pred ccCC---CceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHH-cCCCcccc
Q 012218 350 IVQD---RSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVK-EGLRIKEL 402 (468)
Q Consensus 350 ~l~k---d~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~-aGLPv~~~ 402 (468)
++ +++||+||++|.||..++..|+.+||++|++|+|||.+|.. .|+|++++
T Consensus 241 --~~~~~d~~ivvyC~sG~rs~~a~~~L~~~G~~~v~~~~GG~~~W~~~~~~pv~~~ 295 (373)
T 1okg_A 241 --GDAADLSSFVFSCGSGVTACINIALVHHLGLGHPYLYCGSWSEYSGLFRPPIMRS 295 (373)
T ss_dssp -----CCCTTSEEECSSSSTHHHHHHHHHHTTSCCCEECSSHHHHHHHHTHHHHHHH
T ss_pred --CcccCCCCEEEECCchHHHHHHHHHHHHcCCCCeeEeCChHHHHhcCCCCCcccC
Confidence 66 89999999999999999999999999999999999999997 78998765
No 55
>3tg1_B Dual specificity protein phosphatase 10; kinase/rhodanese-like domain, docking interaction, transfera hydrolase complex; 2.71A {Homo sapiens}
Probab=99.59 E-value=1.7e-15 Score=136.79 Aligned_cols=107 Identities=17% Similarity=0.241 Sum_probs=78.2
Q ss_pred cccCHHHHHHHHhC-------CCCcEEEEcCChhhHhhcCCCCCcccccccccccCcccccc--hhh-------hhhcCc
Q 012218 270 GDLSPKSTLELLRG-------KENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGG--SVK-------KLLRGG 333 (468)
Q Consensus 270 ~~ISp~el~elL~~-------~~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~--~l~-------~ll~~~ 333 (468)
..|+++++.+++.+ +++.+|||||++.||..||||||+ |+|+.++.. ++. .+++..
T Consensus 11 ~~is~~el~~~l~~~~~~~~~~~~~~liDvR~~~e~~~ghI~ga~--------~i~~~~l~~~~~~~~~~~~~~~~~~~~ 82 (158)
T 3tg1_B 11 KIIYPNDLAKKMTKCSKSHLPSQGPVIIDCRPFMEYNKSHIQGAV--------HINCADKISRRRLQQGKITVLDLISCR 82 (158)
T ss_dssp CEECHHHHHHHHCC----------CEEEECSCHHHHHHCCBTTCE--------ECCCSSHHHHHHHTTSSCCHHHHTCCC
T ss_pred cEecHHHHHHHHHhcccccCCCCCEEEEEcCCHHHHHhCCCCCce--------eechhHHHHHhhhhcCcccHHhhcCCH
Confidence 47999999999953 457899999999999999999999 888876531 110 011110
Q ss_pred hhhHHHHHHHHHhhhcccCCCceEEEEeCCCc---------hHHHHHHHHHHccCCCEEEecchHHHHHHc
Q 012218 334 RELDDTLTAAVIRNLKIVQDRSKVIVMDADGT---------RSKGIARSLRKLGVMRAFLVQGGFQSWVKE 395 (468)
Q Consensus 334 ~~L~~~l~alGI~~Lk~l~kd~~IVVyC~sG~---------RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~a 395 (468)
...+ .++ ..++++||+||.+|. ++..+++.|+..|| +|++|+|||.+|.+.
T Consensus 83 ~~~~---------~~~-~~~~~~IVvyc~~g~~~~~~~~~~~s~~a~~~L~~~G~-~v~~L~GG~~~W~~~ 142 (158)
T 3tg1_B 83 EGKD---------SFK-RIFSKEIIVYDENTNEPSRVMPSQPLHIVLESLKREGK-EPLVLKGGLSSFKQN 142 (158)
T ss_dssp CSSC---------SST-TTTTSCEEEECSCCSCTTSCCSSSHHHHHHHHHHTTTC-CEEEETTHHHHHTSS
T ss_pred HHHH---------HHh-ccCCCeEEEEECCCCcccccCcchHHHHHHHHHHhCCC-cEEEeCCcHHHHHHH
Confidence 0000 000 135789999999994 58999999999999 799999999999774
No 56
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.58 E-value=2.8e-15 Score=151.87 Aligned_cols=122 Identities=17% Similarity=0.252 Sum_probs=98.4
Q ss_pred cccCHHHHHHHHhCC--CCcEEEEcCC---------hhhH-hhcCCCCCcccccccccccCcccccchhhhhhcCchhhH
Q 012218 270 GDLSPKSTLELLRGK--ENAVLIDVRH---------EDLR-ERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELD 337 (468)
Q Consensus 270 ~~ISp~el~elL~~~--~~avLIDVRs---------~~Ey-~~gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~ 337 (468)
.-|||+++.++++.+ .++++||++- ..|| +++|||||+ ++++..+ .+.....+.++|+++.++
T Consensus 28 ~LIsp~~l~~ll~~~~~~rvv~lDasw~lP~~~r~~~~E~~~~~HIPGAv---~~Dld~~--~d~~~~~ph~LP~~~~f~ 102 (327)
T 3utn_X 28 DLISPKAFVKLVASEKVHRIVPVDATWYLPSWKLDNKVDFLTKPRIPNSI---FFDIDAI--SDKKSPYPHMFPTKKVFD 102 (327)
T ss_dssp EEECHHHHHHHHHHCSSSCEEEEECCCCCGGGCCCHHHHHHHSCBCTTCE---ECCTTTS--SCTTSSSTTCCCCHHHHH
T ss_pred cccCHHHHHHHHhCCCCCcEEEEEecCCCCCCCCCHHHHHHhhCcCCCCe---eeChHHh--cCCCCCCCCCCcCHHHHH
Confidence 369999999999633 3588999862 4577 679999987 3333221 223345667899999999
Q ss_pred HHHHHHHHhhhcccCCCceEEEEeCCCc-hHHHHHHHHHHccCCCEEEecchHHHHHHcCCCccccc
Q 012218 338 DTLTAAVIRNLKIVQDRSKVIVMDADGT-RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELK 403 (468)
Q Consensus 338 ~~l~alGI~~Lk~l~kd~~IVVyC~sG~-RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv~~~~ 403 (468)
+.++++|| +++++||+|+..|. .|.+++|.|+.+|+++|++|+|| .+|+++|+|++.+.
T Consensus 103 ~~l~~lGI------~~d~~VVvYD~~~~~~AaR~wW~Lr~~Gh~~V~vLdGg-~aW~~~g~p~~~~~ 162 (327)
T 3utn_X 103 DAMSNLGV------QKDDILVVYDRVGNFSSPRCAWTLGVMGHPKVYLLNNF-NQYREFKYPLDSSK 162 (327)
T ss_dssp HHHHHTTC------CTTCEEEEECSSSSSSHHHHHHHHHHTTCSEEEEESCH-HHHHHTTCCCBCCC
T ss_pred HHHHHcCC------CCCCEEEEEeCCCCcHHHHHHHHHHHcCCCceeecccH-HHHHHhCCCcccCC
Confidence 99999999 88999999998765 78899999999999999999987 89999999997653
No 57
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.57 E-value=3.2e-15 Score=159.61 Aligned_cols=97 Identities=21% Similarity=0.242 Sum_probs=84.7
Q ss_pred CCCCcccCHHHHHHHHhCCCCcEEEEcCChhhHhhcCCCCCcccccccccccCcccccchhhhhhcCchhhHHHHHHHHH
Q 012218 266 GGYSGDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVI 345 (468)
Q Consensus 266 ~~y~~~ISp~el~elL~~~~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l~alGI 345 (468)
......|+++++.++++ ++.+|||||++.||+.+|||||+ |+|+.++...+.+
T Consensus 485 ~~~~~~i~~~~~~~~~~--~~~~~iDvR~~~e~~~ghi~ga~--------~ip~~~l~~~~~~----------------- 537 (588)
T 3ics_A 485 DGFVDTVQWHEIDRIVE--NGGYLIDVREPNELKQGMIKGSI--------NIPLDELRDRLEE----------------- 537 (588)
T ss_dssp TTSCCEECTTTHHHHHH--TTCEEEECSCGGGGGGCBCTTEE--------ECCHHHHTTCGGG-----------------
T ss_pred ccccceecHHHHHHHhc--CCCEEEEcCCHHHHhcCCCCCCE--------ECCHHHHHHHHhh-----------------
Confidence 34446899999999985 46899999999999999999999 9998777554332
Q ss_pred hhhcccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHc
Q 012218 346 RNLKIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKE 395 (468)
Q Consensus 346 ~~Lk~l~kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~a 395 (468)
++++++||+||++|.||..+++.|+++||+ |++|+|||.+|+++
T Consensus 538 -----l~~~~~iv~~C~~g~rs~~a~~~l~~~G~~-v~~l~GG~~~w~~~ 581 (588)
T 3ics_A 538 -----VPVDKDIYITCQLGMRGYVAARMLMEKGYK-VKNVDGGFKLYGTV 581 (588)
T ss_dssp -----SCSSSCEEEECSSSHHHHHHHHHHHHTTCC-EEEETTHHHHHHHH
T ss_pred -----CCCCCeEEEECCCCcHHHHHHHHHHHcCCc-EEEEcchHHHHHhh
Confidence 378899999999999999999999999998 99999999999985
No 58
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=99.56 E-value=2.6e-15 Score=142.77 Aligned_cols=98 Identities=26% Similarity=0.242 Sum_probs=75.7
Q ss_pred CCCCcEEEEcCChhhHhhcCCCCCcccccccccccCcc--cccc-hhhhhhcCchhhHHHHHHHHHhhhcccCCCceEEE
Q 012218 283 GKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLP--EVGG-SVKKLLRGGRELDDTLTAAVIRNLKIVQDRSKVIV 359 (468)
Q Consensus 283 ~~~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~--el~~-~l~~ll~~~~~L~~~l~alGI~~Lk~l~kd~~IVV 359 (468)
++++.+|||+|++.||..||||||+ |+|+. ++.. ....++++++.+++.+..+ +.+++||+
T Consensus 3 ~~~~~~iiDvR~~~ey~~ghIpgAi--------~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~l--------~~~~~ivv 66 (230)
T 2eg4_A 3 LPEDAVLVDTRPRPAYEAGHLPGAR--------HLDLSAPKLRLREEAELKALEGGLTELFQTL--------GLRSPVVL 66 (230)
T ss_dssp CCTTCEEEECSCHHHHHHCBCTTCE--------ECCCCSCCCCCCSHHHHHHHHHHHHHHHHHT--------TCCSSEEE
T ss_pred CCCCEEEEECCChhhHhhCcCCCCE--------ECCccchhcccCCCCCcCCCHHHHHHHHHhc--------CCCCEEEE
Confidence 4567999999999999999999998 88876 4421 1122333344455444433 34789999
Q ss_pred EeCCCc-hHHHHHHHHHHccCCCEEEecchHHHHHHcCCCcccc
Q 012218 360 MDADGT-RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKEL 402 (468)
Q Consensus 360 yC~sG~-RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv~~~ 402 (468)
||++|. +|.++++.|+ +||++|++|+|| |.+ +|++..
T Consensus 67 yc~~g~~~s~~a~~~L~-~G~~~v~~l~GG---W~~--~p~~~~ 104 (230)
T 2eg4_A 67 YDEGLTSRLCRTAFFLG-LGGLEVQLWTEG---WEP--YATEKE 104 (230)
T ss_dssp ECSSSCHHHHHHHHHHH-HTTCCEEEECSS---CGG--GCCBCS
T ss_pred EcCCCCccHHHHHHHHH-cCCceEEEeCCC---Ccc--CcccCC
Confidence 999999 9999999999 999999999999 987 888654
No 59
>1whb_A KIAA0055; deubiqutinating enzyme, UBPY, structural genomics, riken structural genomics/proteomics initiative, RSGI, hydrolase; NMR {Homo sapiens} SCOP: c.46.1.4
Probab=99.54 E-value=5.1e-15 Score=133.73 Aligned_cols=116 Identities=16% Similarity=0.235 Sum_probs=79.3
Q ss_pred cccCHHHHHHHHhCC-CCcEEEEcCChhhHhhcCCCCCcccccccccccCcccccch-----hhhhhcCchhhHHHHHHH
Q 012218 270 GDLSPKSTLELLRGK-ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGS-----VKKLLRGGRELDDTLTAA 343 (468)
Q Consensus 270 ~~ISp~el~elL~~~-~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~~-----l~~ll~~~~~L~~~l~al 343 (468)
..|+++++.+++++. ++++|||||+++||+.||||||+ |||+..+... +...+++. ....+.
T Consensus 15 ~~i~~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gai--------nip~~~~~~~~~~~~l~~~lp~~--~~~~~~-- 82 (157)
T 1whb_A 15 GAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSL--------SVPEEAISPGVTASWIEAHLPDD--SKDTWK-- 82 (157)
T ss_dssp SEECHHHHHHHHTCSSSCEEEEEESCHHHHHHCCBTTCE--------EECSSSCCTTCCHHHHHHSCCTT--HHHHHH--
T ss_pred CccCHHHHHHHHhcCCCCeEEEECCCHHHHHhccccCCc--------ccCHHHccCCCcHHHHHHHCChH--HHHHHH--
Confidence 479999999999533 27999999999999999999999 8888665421 22222211 111111
Q ss_pred HHhhhcccCCCceEEEEeCCCch----HHHHHHHHHHc--------cCC-CEEEecchHHHHHHcCCCcccccc
Q 012218 344 VIRNLKIVQDRSKVIVMDADGTR----SKGIARSLRKL--------GVM-RAFLVQGGFQSWVKEGLRIKELKS 404 (468)
Q Consensus 344 GI~~Lk~l~kd~~IVVyC~sG~R----S~~AA~~L~~~--------Gf~-nV~vLdGG~~aW~~aGLPv~~~~~ 404 (468)
...+...||+||..|.+ +..+++.|.+. ||. +|++|+|||.+|++. +|.....+
T Consensus 83 ------~~~~~~~VVvy~~~~~~~~~~a~~~~~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~~~~~ 149 (157)
T 1whb_A 83 ------KRGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQYTTNA 149 (157)
T ss_dssp ------GGGTSSEEEEECSSCCGGGCCTTCHHHHHHHTTTTTCSSCCCSSCCEEESSCHHHHHHH-CGGGBSCC
T ss_pred ------hcCCCCEEEEECCCCCccccccccHHHHHHHHHHHhccccccCCCeEEEcchHHHHHHH-ChhhhCCC
Confidence 11234569999988754 34556666532 454 499999999999985 88776543
No 60
>2gwf_A Ubiquitin carboxyl-terminal hydrolase 8; protein-protein complex, E3 ligase, protein ubiquitination, hydrolase, protease, UBL conjugation pathway; 2.30A {Homo sapiens} SCOP: c.46.1.4
Probab=99.54 E-value=1.2e-14 Score=131.78 Aligned_cols=114 Identities=18% Similarity=0.258 Sum_probs=77.1
Q ss_pred cccCHHHHHHHHhCC-CCcEEEEcCChhhHhhcCCCCCcccccccccccCcccccch-----hhhhhcCchhhHHHHHHH
Q 012218 270 GDLSPKSTLELLRGK-ENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGS-----VKKLLRGGRELDDTLTAA 343 (468)
Q Consensus 270 ~~ISp~el~elL~~~-~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~~-----l~~ll~~~~~L~~~l~al 343 (468)
..|+++++.+++++. ++++|||||++.||+.||||||+ |||+..+... +...++ +.....+
T Consensus 20 ~~is~~~l~~~l~~~~~~~~liDvR~~~ey~~gHI~gAi--------nip~~~l~~~~~~~~l~~~lp--~~~~~l~--- 86 (157)
T 2gwf_A 20 GAITAKELYTMMTDKNISLIIMDARRMQDYQDSCILHSL--------SVPEEAISPGVTASWIEAHLP--DDSKDTW--- 86 (157)
T ss_dssp CEECHHHHHHHHHSTTSCEEEEECSCHHHHHHSCBTTCE--------ECCGGGCCTTCCHHHHHHTSC--HHHHHHH---
T ss_pred CccCHHHHHHHHhcCCCCeEEEECCCHHHHHhcCccCCc--------ccCHHHcCCCCcHHHHHHHcC--HHHHHHH---
Confidence 479999999999643 37999999999999999999999 9998766432 112121 1111111
Q ss_pred HHhhhcccCCCceEEEEeCCCch----HHHHHHHHH----Hc----cCC-CEEEecchHHHHHHcCCCcccc
Q 012218 344 VIRNLKIVQDRSKVIVMDADGTR----SKGIARSLR----KL----GVM-RAFLVQGGFQSWVKEGLRIKEL 402 (468)
Q Consensus 344 GI~~Lk~l~kd~~IVVyC~sG~R----S~~AA~~L~----~~----Gf~-nV~vLdGG~~aW~~aGLPv~~~ 402 (468)
....+...||+||.+|.+ +..+++.|. +. ||. +|++|+|||.+|++. +|..-.
T Consensus 87 -----~~~~~~~~VVvy~~~~~~~~~~a~~~l~~L~~~L~~~~~~~~~~~~V~~L~GG~~aW~~~-~p~~~~ 152 (157)
T 2gwf_A 87 -----KKRGNVEYVVLLDWFSSAKDLQIGTTLRSLKDALFKWESKTVLRNEPLVLEGGYENWLLC-YPQYTT 152 (157)
T ss_dssp -----HTTTTSSEEEEECSSCCGGGCCTTCHHHHHHHHHHTSCCSSCCSSCCEEETTHHHHHHHH-CGGGBS
T ss_pred -----HhcCCCCEEEEEcCCCCccccCcccHHHHHHHHHHhhccccccCCceEEEccHHHHHHHH-ChhhcC
Confidence 111334569999988754 334555554 22 454 499999999999984 876553
No 61
>3utn_X Thiosulfate sulfurtransferase TUM1; rhodanese-like domain; 1.90A {Saccharomyces cerevisiae}
Probab=99.49 E-value=9.9e-14 Score=140.53 Aligned_cols=192 Identities=16% Similarity=0.120 Sum_probs=122.6
Q ss_pred ccCCCCCCCchHHHhhhhhHhhhhhcccccchHHHHHHHHHHHHHhcCCCCCCCcchHHHHHhhhHHHHHHHHH------
Q 012218 189 GTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVSVAIEGLERSLGFDPNDPIVPFVVFLGTSATLWIFYWW------ 262 (468)
Q Consensus 189 G~~~~~l~p~~~~~~~~~e~~~~~v~~p~g~~~~q~~~~ie~le~~lgf~~~~PvL~~~~~vg~~aal~l~~~l------ 262 (468)
||++..++-++..+- |.....-.|+...- +..++ -+.+|+.++++|+++...-+..++. ++|.+
T Consensus 71 ~HIPGAv~~Dld~~~----d~~~~~ph~LP~~~-~f~~~----l~~lGI~~d~~VVvYD~~~~~~AaR-~wW~Lr~~Gh~ 140 (327)
T 3utn_X 71 PRIPNSIFFDIDAIS----DKKSPYPHMFPTKK-VFDDA----MSNLGVQKDDILVVYDRVGNFSSPR-CAWTLGVMGHP 140 (327)
T ss_dssp CBCTTCEECCTTTSS----CTTSSSTTCCCCHH-HHHHH----HHHTTCCTTCEEEEECSSSSSSHHH-HHHHHHHTTCS
T ss_pred CcCCCCeeeChHHhc----CCCCCCCCCCcCHH-HHHHH----HHHcCCCCCCEEEEEeCCCCcHHHH-HHHHHHHcCCC
Confidence 788888888775321 11111222333322 24444 3458999999999875443334433 33222
Q ss_pred ----------HHhCCCC--------------------c------ccCHHHHHHHHhCC---CCcEEEEcCChhhHh----
Q 012218 263 ----------WTYGGYS--------------------G------DLSPKSTLELLRGK---ENAVLIDVRHEDLRE---- 299 (468)
Q Consensus 263 ----------~~~~~y~--------------------~------~ISp~el~elL~~~---~~avLIDVRs~~Ey~---- 299 (468)
|...++. . .++.+++.+.++++ ++.+|||+|++++|.
T Consensus 141 ~V~vLdGg~aW~~~g~p~~~~~~~~~~p~p~~~~~~~~~~~~~~v~~~~~v~~~v~~~~~~~~~~lvDaRs~~rf~G~~~ 220 (327)
T 3utn_X 141 KVYLLNNFNQYREFKYPLDSSKVAAFSPYPKSHYESSESFQDKEIVDYEEMFQLVKSGELAKKFNAFDARSLGRFEGTEP 220 (327)
T ss_dssp EEEEESCHHHHHHTTCCCBCCCCSCSCSSCCCCCCCSCCCHHHHEECHHHHHHHHHTTCHHHHCEEEECSCHHHHHTSSC
T ss_pred ceeecccHHHHHHhCCCcccCCccCcCCcCCcccccccccCchheecHHHHhhhhhcccccccceeeccCccceeccccc
Confidence 2222210 0 14456777777543 246899999999995
Q ss_pred -------hcCCCCCcccccccccccCcccccchhhhhhcC-chhhHHHHHHHHHhhhcccCCCceEEEEeCCCchHHHHH
Q 012218 300 -------RDGIPDLRRGARFRYASVYLPEVGGSVKKLLRG-GRELDDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIA 371 (468)
Q Consensus 300 -------~gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~-~~~L~~~l~alGI~~Lk~l~kd~~IVVyC~sG~RS~~AA 371 (468)
.||||||+ |+|+.++.+.-...++. .+.+...+++........++++++||+||.+|.+|+..+
T Consensus 221 ep~~~~r~GHIPGA~--------nlP~~~~ld~~~~~~~~~~e~l~~~l~~~~~~~~~gid~~k~vI~yCgsGvtA~~~~ 292 (327)
T 3utn_X 221 EPRSDIPSGHIPGTQ--------PLPYGSLLDPETKTYPEAGEAIHATLEKALKDFHCTLDPSKPTICSCGTGVSGVIIK 292 (327)
T ss_dssp CSSSSCCCCBCTTEE--------ECCGGGGSCTTTCCCCCTTHHHHHHHHHHHHHTTCCCCTTSCEEEECSSSHHHHHHH
T ss_pred CccccccCCCCCCCc--------ccChhhccCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCCCCCEEEECChHHHHHHHH
Confidence 59999999 99987765433333332 233344444332222223478999999999999999999
Q ss_pred HHHHHccCCCEEEecchHHHHHHcCCC
Q 012218 372 RSLRKLGVMRAFLVQGGFQSWVKEGLR 398 (468)
Q Consensus 372 ~~L~~~Gf~nV~vLdGG~~aW~~aGLP 398 (468)
..|+.+||++|++|+|+|..|....-|
T Consensus 293 laL~~lG~~~v~lYdGSWsEW~~r~~p 319 (327)
T 3utn_X 293 TALELAGVPNVRLYDGSWTEWVLKSGP 319 (327)
T ss_dssp HHHHHTTCCSEEEESSHHHHHHHHHCG
T ss_pred HHHHHcCCCCceeCCCcHHHhccccCC
Confidence 999999999999999999999875433
No 62
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.46 E-value=5.6e-15 Score=155.08 Aligned_cols=87 Identities=15% Similarity=0.126 Sum_probs=0.0
Q ss_pred HHHHHhCCCCcEEEEcCChhhHhhcCCCCCcccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhcccCCCce
Q 012218 277 TLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDRSK 356 (468)
Q Consensus 277 l~elL~~~~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l~alGI~~Lk~l~kd~~ 356 (468)
+.+++ ++++.+|||||++.||..||||||+ |+|+.++...+.+ ++++++
T Consensus 379 ~~~~~-~~~~~~liDvR~~~e~~~ghIpgA~--------~ip~~~l~~~~~~----------------------l~~~~~ 427 (466)
T 3r2u_A 379 HSEDI-TGNESHILDVRNDNEWNNGHLSQAV--------HVPHGKLLETDLP----------------------FNKNDV 427 (466)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHH-hCCCcEEEEeCCHHHHhcCcCCCCE--------ECCHHHHHHHHhh----------------------CCCCCe
Confidence 44555 3467899999999999999999999 9998777554322 267899
Q ss_pred EEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHH
Q 012218 357 VIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVK 394 (468)
Q Consensus 357 IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~ 394 (468)
||+||++|.||..+++.|+++||++|++|+|||.+|++
T Consensus 428 iv~~C~~G~rs~~a~~~L~~~G~~~v~~l~GG~~~W~~ 465 (466)
T 3r2u_A 428 IYVHCQSGIRSSIAIGILEHKGYHNIINVNEGYKDIQL 465 (466)
T ss_dssp --------------------------------------
T ss_pred EEEECCCChHHHHHHHHHHHcCCCCEEEecChHHHHhh
Confidence 99999999999999999999999999999999999975
No 63
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.37 E-value=3.2e-13 Score=141.16 Aligned_cols=100 Identities=15% Similarity=0.138 Sum_probs=82.4
Q ss_pred cccCHHHHHHHHhCCCCcEEEEcCChhhHhhcCCCCCcccccccccccCccc-ccchhhhhhcCchhhHHHHHHHHHhhh
Q 012218 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPE-VGGSVKKLLRGGRELDDTLTAAVIRNL 348 (468)
Q Consensus 270 ~~ISp~el~elL~~~~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~e-l~~~l~~ll~~~~~L~~~l~alGI~~L 348 (468)
..|+++++.+++++ + +|||+|++.||..||||||+ |+|+.. +...+.. +
T Consensus 273 ~~is~~~l~~~l~~--~-~iiD~R~~~~y~~ghIpGA~--------~i~~~~~~~~~~~~--------------l----- 322 (474)
T 3tp9_A 273 VDLPPERVRAWREG--G-VVLDVRPADAFAKRHLAGSL--------NIPWNKSFVTWAGW--------------L----- 322 (474)
T ss_dssp CCCCGGGHHHHHHT--S-EEEECSCHHHHHHSEETTCE--------ECCSSTTHHHHHHH--------------H-----
T ss_pred ceeCHHHHHHHhCC--C-EEEECCChHHHhccCCCCeE--------EECcchHHHHHHHh--------------c-----
Confidence 47999999999964 4 99999999999999999999 888753 3322221 1
Q ss_pred cccCCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHHcCCCcccc
Q 012218 349 KIVQDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKEL 402 (468)
Q Consensus 349 k~l~kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv~~~ 402 (468)
.+++++||+||..|. +.++++.|+.+||++|+.+.+|+.+|+.+|+|+...
T Consensus 323 --~~~~~~vvvy~~~~~-~~~~~~~L~~~G~~~v~~~l~G~~~W~~~g~~~~~~ 373 (474)
T 3tp9_A 323 --LPADRPIHLLAADAI-APDVIRALRSIGIDDVVDWTDPAAVDRAAPDDVASY 373 (474)
T ss_dssp --CCSSSCEEEECCTTT-HHHHHHHHHHTTCCCEEEEECGGGGTTCCGGGEECC
T ss_pred --CCCCCeEEEEECCCc-HHHHHHHHHHcCCcceEEecCcHHHHHhcccccccc
Confidence 157889999999886 566999999999999999777999999999888654
No 64
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=98.95 E-value=6.1e-10 Score=116.84 Aligned_cols=80 Identities=8% Similarity=0.000 Sum_probs=60.9
Q ss_pred CCCcEEEEcCChhhHhhcCCCCCcccccccccccCccc-ccchhhhhhcCchhhHHHHHHHHHhhhcccCCCceEEEEeC
Q 012218 284 KENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPE-VGGSVKKLLRGGRELDDTLTAAVIRNLKIVQDRSKVIVMDA 362 (468)
Q Consensus 284 ~~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~e-l~~~l~~ll~~~~~L~~~l~alGI~~Lk~l~kd~~IVVyC~ 362 (468)
+++++|||+|++.+|.+||||||+ |+|+.. +......+ ++++++||+||.
T Consensus 294 ~~~~~ilD~R~~~~y~~gHIpGAv--------~ip~~~~~~~~~~~~---------------------~~~~~~vvly~~ 344 (466)
T 3r2u_A 294 NTNRLTFDLRSKEAYHGGHIEGTI--------NIPYDKNFINQIGWY---------------------LNYDQEINLIGD 344 (466)
T ss_dssp CCCSEEEECSCHHHHHHSCCTTCE--------ECCSSTTHHHHHTTT---------------------CCTTSCEEEESC
T ss_pred CCCeEEEECCCHHHHhhCCCCCcE--------ECCccHHHHHHHHhc---------------------cCCCCeEEEEEC
Confidence 467899999999999999999999 888753 33322211 267899999999
Q ss_pred CCchHHHHHHHHHHccCCCEEE-ecchHHHHH
Q 012218 363 DGTRSKGIARSLRKLGVMRAFL-VQGGFQSWV 393 (468)
Q Consensus 363 sG~RS~~AA~~L~~~Gf~nV~v-LdGG~~aW~ 393 (468)
+.++.+++|.|+++||++|+. ++|+...|.
T Consensus 345 -~~~a~~a~~~L~~~G~~~v~~~l~g~~~~~~ 375 (466)
T 3r2u_A 345 -YHLVSKATHTLQLIGYDDIAGYQLPQSKIQT 375 (466)
T ss_dssp -HHHHHHHHHHHHTTTCCCEEEEECCC-----
T ss_pred -CchHHHHHHHhhhhhcccccccccCcccccH
Confidence 558999999999999999997 667655544
No 65
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=96.35 E-value=0.0052 Score=54.70 Aligned_cols=105 Identities=11% Similarity=0.085 Sum_probs=58.0
Q ss_pred cccCHHHHHHHHhCCCCcEEEEcCChhh------------Hhhc-CCCCCcccccccccccCcccccchhhhhhcCchhh
Q 012218 270 GDLSPKSTLELLRGKENAVLIDVRHEDL------------RERD-GIPDLRRGARFRYASVYLPEVGGSVKKLLRGGREL 336 (468)
Q Consensus 270 ~~ISp~el~elL~~~~~avLIDVRs~~E------------y~~g-HIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L 336 (468)
+.++++++..+.+ ..-..|||+|++.| |.+. +|+|.. ++|+.... +.++.+
T Consensus 28 ~~~~~~d~~~L~~-~Gi~~IIdlR~~~E~~~~p~~~~~~~~~~~~gi~~~~--------~iPv~~~~-------~~~~~~ 91 (156)
T 2f46_A 28 PQLTKADAEQIAQ-LGIKTIICNRPDREEESQPDFAQIKQWLEQAGVTGFH--------HQPVTARD-------IQKHDV 91 (156)
T ss_dssp SCCCGGGHHHHHH-HTCCEEEECSCTTSSTTCCCHHHHHHHHGGGTCCEEE--------ECCCCTTT-------CCHHHH
T ss_pred CCCCHHHHHHHHH-CCCCEEEECCCCccccCCCcHHHHHHHHHHCCCHhhe--------ECccCCCC-------CCHHHH
Confidence 3578888877653 23357999998766 2223 466555 77764321 011122
Q ss_pred HHHHHHHHHhhhcccCCCceEEEEeCCCchHHHHHHH-HHHccCCCEEEecchHHHHHHcCCCccc
Q 012218 337 DDTLTAAVIRNLKIVQDRSKVIVMDADGTRSKGIARS-LRKLGVMRAFLVQGGFQSWVKEGLRIKE 401 (468)
Q Consensus 337 ~~~l~alGI~~Lk~l~kd~~IVVyC~sG~RS~~AA~~-L~~~Gf~nV~vLdGG~~aW~~aGLPv~~ 401 (468)
.+..+. +. ..+.+|+|||++|.|+..++.. |...|.. .+.=+..-++.|+.+..
T Consensus 92 ~~~~~~-----l~--~~~~pVlvHC~sG~Rs~~l~al~l~~~g~~----~~~a~~~~~~~g~~l~~ 146 (156)
T 2f46_A 92 ETFRQL-----IG--QAEYPVLAYCRTGTRCSLLWGFRRAAEGMP----VDEIIRRAQAAGVNLEN 146 (156)
T ss_dssp HHHHHH-----HH--TSCSSEEEECSSSHHHHHHHHHHHHHTTCC----HHHHHHHHHHTTCCCGG
T ss_pred HHHHHH-----HH--hCCCCEEEECCCCCCHHHHHHHHHHHcCCC----HHHHHHHHHHcCCCcHH
Confidence 221111 11 3578999999999988754333 2445543 22333444556665443
No 66
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=82.38 E-value=3.8 Score=35.02 Aligned_cols=27 Identities=33% Similarity=0.473 Sum_probs=19.9
Q ss_pred CCceEEEEeCCC-chHHH--HHHHHHHccC
Q 012218 353 DRSKVIVMDADG-TRSKG--IARSLRKLGV 379 (468)
Q Consensus 353 kd~~IVVyC~sG-~RS~~--AA~~L~~~Gf 379 (468)
.+.+|+|+|..| .||.. +++.+...|.
T Consensus 80 ~~~~VlVHC~~G~~RS~~~v~ayLm~~~~~ 109 (145)
T 2nt2_A 80 HGSKCLVHSKMGVSRSASTVIAYAMKEYGW 109 (145)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHHHCC
T ss_pred cCCeEEEECCCCCchHHHHHHHHHHHHhCC
Confidence 567999999999 58864 3556666665
No 67
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens}
Probab=81.60 E-value=3.6 Score=35.37 Aligned_cols=27 Identities=30% Similarity=0.417 Sum_probs=19.3
Q ss_pred CCceEEEEeCCCc-hHHHH--HHHHHHccC
Q 012218 353 DRSKVIVMDADGT-RSKGI--ARSLRKLGV 379 (468)
Q Consensus 353 kd~~IVVyC~sG~-RS~~A--A~~L~~~Gf 379 (468)
.+.+|+|+|..|. ||..+ +..+...|.
T Consensus 89 ~~~~vlvHC~aG~~RS~~~~~ayl~~~~~~ 118 (154)
T 2r0b_A 89 MGGKVLVHGNAGISRSAAFVIAYIMETFGM 118 (154)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHHTC
T ss_pred cCCCEEEEcCCCCChHHHHHHHHHHHHcCC
Confidence 5678999999994 87753 444555665
No 68
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=77.58 E-value=1.5 Score=37.67 Aligned_cols=27 Identities=22% Similarity=0.059 Sum_probs=19.5
Q ss_pred CCceEEEEeCCCc-hHHHH--HHHHHHccC
Q 012218 353 DRSKVIVMDADGT-RSKGI--ARSLRKLGV 379 (468)
Q Consensus 353 kd~~IVVyC~sG~-RS~~A--A~~L~~~Gf 379 (468)
.+.+|+|+|..|. ||..+ +..+...|.
T Consensus 88 ~~~~vlVHC~~G~~Rsg~~~~a~l~~~~~~ 117 (157)
T 3rgo_A 88 LGQCVYVHCKAGRSRSATMVAAYLIQVHNW 117 (157)
T ss_dssp TTCEEEEESSSSSSHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCCCChHHHHHHHHHHHHcCC
Confidence 4679999999998 88765 344455665
No 69
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens}
Probab=77.04 E-value=3.6 Score=35.28 Aligned_cols=28 Identities=25% Similarity=0.191 Sum_probs=20.0
Q ss_pred CCceEEEEeCCCc-hHHH--HHHHHHHccCC
Q 012218 353 DRSKVIVMDADGT-RSKG--IARSLRKLGVM 380 (468)
Q Consensus 353 kd~~IVVyC~sG~-RS~~--AA~~L~~~Gf~ 380 (468)
.+.+|+|+|..|. ||.. ++..+...|.+
T Consensus 84 ~~~~vlVHC~aG~~RSg~~~~ayl~~~~~~~ 114 (151)
T 2e0t_A 84 PGGKILVHCAVGVSRSATLVLAYLMLYHHLT 114 (151)
T ss_dssp TTCCEEEECSSSSHHHHHHHHHHHHHHSCCC
T ss_pred CCCcEEEECCCCCChHHHHHHHHHHHHcCCC
Confidence 5679999999994 8773 34455666763
No 70
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus}
Probab=75.79 E-value=7.3 Score=33.98 Aligned_cols=27 Identities=30% Similarity=0.425 Sum_probs=20.0
Q ss_pred CCceEEEEeCCCc-hHHHH--HHHHHHccC
Q 012218 353 DRSKVIVMDADGT-RSKGI--ARSLRKLGV 379 (468)
Q Consensus 353 kd~~IVVyC~sG~-RS~~A--A~~L~~~Gf 379 (468)
.+.+|+|+|..|. ||..+ +..++..|.
T Consensus 88 ~~~~VlVHC~aG~~RSg~~~~ayLm~~~~~ 117 (164)
T 2hcm_A 88 DGGSCLVYCKNGRSRSAAVCTAYLMRHRGH 117 (164)
T ss_dssp TTCEEEEEESSSSHHHHHHHHHHHHHHSCC
T ss_pred cCCEEEEECCCCCchHHHHHHHHHHHHhCC
Confidence 5689999999994 87743 455666675
No 71
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=73.76 E-value=1.2 Score=43.97 Aligned_cols=50 Identities=12% Similarity=0.066 Sum_probs=32.2
Q ss_pred ccCCCCCCCchHH---HhhhhhHhhh--hhcccccchHHHHHHHHHHHHHhcCCCC
Q 012218 189 GTTKESLPPEIRD---ALNLYEDRAV--KLWRPVGSALQQVSVAIEGLERSLGFDP 239 (468)
Q Consensus 189 G~~~~~l~p~~~~---~~~~~e~~~~--~v~~p~g~~~~q~~~~ie~le~~lgf~~ 239 (468)
+|||+|++|+..+ ...+|++.+. .+++|+.+..+ ..++.|.++-++|+-.
T Consensus 187 t~Cy~Cl~p~~~~~~~~~~~~~~~gvc~~~l~~~~g~vg-slqA~EalK~L~g~g~ 241 (292)
T 3h8v_A 187 SACFACAPPLVVAANIDEKTLKREGVCAASLPTTMGVVA-GILVQNVLKFLLNFGT 241 (292)
T ss_dssp SCCTTSSSCCCCCCC-------CHHHHHHHHHHHHHHHH-HHHHHHHHHHHHTCSC
T ss_pred CCCHhhcCCccccccccccchhhcCcccCCcchHHHHHH-HHHHHHHHHHHhCCCC
Confidence 4899999997532 1245666663 24777777777 6788899998888754
No 72
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=72.44 E-value=11 Score=31.85 Aligned_cols=90 Identities=18% Similarity=0.175 Sum_probs=44.2
Q ss_pred CHHHHHHHHhCCCCcEEEEcCChhhHhhcCCCCCcccccccccccCcccccchhhhhhcCchhhHHHHHHHHHhhhcccC
Q 012218 273 SPKSTLELLRGKENAVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGGSVKKLLRGGRELDDTLTAAVIRNLKIVQ 352 (468)
Q Consensus 273 Sp~el~elL~~~~~avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~~l~~ll~~~~~L~~~l~alGI~~Lk~l~ 352 (468)
+++++..+.+ ..=..+||+|+..|......+|-. +.++|..+... ++.+.+.+.+... ... ..
T Consensus 24 ~~~~~~~L~~-~gi~~Vi~l~~~~~~~~~~~~~~~------~~~~~~~d~~~------~~~~~~~~~~~~i--~~~--~~ 86 (150)
T 4erc_A 24 LPAHYQFLLD-LGVRHLVSLTERGPPHSDSCPGLT------LHRLRIPDFCP------PAPDQIDRFVQIV--DEA--NA 86 (150)
T ss_dssp SHHHHHHHHH-TTEEEEEECSSSCCTTGGGCTTSE------EEECCCCTTSC------CCHHHHHHHHHHH--HHH--HH
T ss_pred CHHHHHHHHH-CCCCEEEEcCCCCCCcccccCCce------EEEEecCCCCC------CCHHHHHHHHHHH--HHH--HH
Confidence 4666655543 333579999997665433333321 22344432211 1111122211111 000 13
Q ss_pred CCceEEEEeCCCc-hHHHH-HH-HHHHccC
Q 012218 353 DRSKVIVMDADGT-RSKGI-AR-SLRKLGV 379 (468)
Q Consensus 353 kd~~IVVyC~sG~-RS~~A-A~-~L~~~Gf 379 (468)
.+.+|+|+|..|. ||... +. .+...|.
T Consensus 87 ~~~~vlVHC~~G~~Rsg~~~a~~l~~~~~~ 116 (150)
T 4erc_A 87 RGEAVGVHCALGFGRTGTMLACYLVKERGL 116 (150)
T ss_dssp TTCEEEEECSSSSHHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 5679999999997 87643 33 3444555
No 73
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=72.03 E-value=8.2 Score=32.51 Aligned_cols=19 Identities=26% Similarity=0.079 Sum_probs=14.7
Q ss_pred CCceEEEEeCCCc-hHHHHH
Q 012218 353 DRSKVIVMDADGT-RSKGIA 371 (468)
Q Consensus 353 kd~~IVVyC~sG~-RS~~AA 371 (468)
.+.+|+|+|..|. |+..++
T Consensus 88 ~~~~vlVHC~aG~~Rsg~~~ 107 (151)
T 2img_A 88 RGEAVGVHCALGFGRTGTML 107 (151)
T ss_dssp TTCEEEEECSSSSSHHHHHH
T ss_pred CCCcEEEECCCCCChHHHHH
Confidence 4679999999986 776543
No 74
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=70.82 E-value=2.6 Score=36.15 Aligned_cols=27 Identities=11% Similarity=0.086 Sum_probs=19.1
Q ss_pred CCceEEEEeCCCc-hHHHHHH-HHHHccC
Q 012218 353 DRSKVIVMDADGT-RSKGIAR-SLRKLGV 379 (468)
Q Consensus 353 kd~~IVVyC~sG~-RS~~AA~-~L~~~Gf 379 (468)
++.+|+|+|..|. |+..++. .|...|.
T Consensus 91 ~~~~vlvHC~aG~~RTg~~~a~~l~~~g~ 119 (151)
T 1xri_A 91 KNHPVLIHCKRGKHRTGCLVGCLRKLQKW 119 (151)
T ss_dssp GGCSEEEECSSSSSHHHHHHHHHHHHTTB
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHhCC
Confidence 4678999999996 8766553 3455554
No 75
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=69.81 E-value=12 Score=32.49 Aligned_cols=28 Identities=21% Similarity=0.272 Sum_probs=19.9
Q ss_pred CCceEEEEeCCC-chHHH--HHHHHHHccCC
Q 012218 353 DRSKVIVMDADG-TRSKG--IARSLRKLGVM 380 (468)
Q Consensus 353 kd~~IVVyC~sG-~RS~~--AA~~L~~~Gf~ 380 (468)
.+.+|+|+|..| .||.. ++..+...|.+
T Consensus 83 ~~~~VlVHC~aG~~RSg~~~~aylm~~~~~~ 113 (160)
T 1yz4_A 83 NGGNCLVHSFAGISRSTTIVTAYVMTVTGLG 113 (160)
T ss_dssp TTCCEEEEETTSSSHHHHHHHHHHHHHHCCC
T ss_pred cCCeEEEECCCCCchHHHHHHHHHHHHcCCC
Confidence 467899999999 58874 34455666763
No 76
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens}
Probab=69.61 E-value=12 Score=32.78 Aligned_cols=27 Identities=19% Similarity=0.142 Sum_probs=19.1
Q ss_pred CCceEEEEeCCCc-hHHHH--HHHHHHccC
Q 012218 353 DRSKVIVMDADGT-RSKGI--ARSLRKLGV 379 (468)
Q Consensus 353 kd~~IVVyC~sG~-RS~~A--A~~L~~~Gf 379 (468)
.+.+|+|+|..|. ||..+ |..+...|.
T Consensus 82 ~~~~VlVHC~aG~~RSg~~~~ayLm~~~~~ 111 (165)
T 1wrm_A 82 RGESCLVHCLAGVSRSVTLVIAYIMTVTDF 111 (165)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHTSSC
T ss_pred CCCeEEEECCCCCChhHHHHHHHHHHHcCC
Confidence 5679999999994 88763 444455554
No 77
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=68.33 E-value=9.2 Score=32.57 Aligned_cols=27 Identities=19% Similarity=0.226 Sum_probs=19.3
Q ss_pred CCceEEEEeCCCc-hHHH--HHHHHHHccC
Q 012218 353 DRSKVIVMDADGT-RSKG--IARSLRKLGV 379 (468)
Q Consensus 353 kd~~IVVyC~sG~-RS~~--AA~~L~~~Gf 379 (468)
.+.+|+|+|..|. ||.. ++..+...|.
T Consensus 80 ~~~~VlVHC~~G~sRS~~~v~ayLm~~~~~ 109 (144)
T 3s4e_A 80 KDGVVLVHSNAGVSRAAAIVIGFLMNSEQT 109 (144)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHHCC
T ss_pred cCCeEEEEcCCCCchHHHHHHHHHHHHcCC
Confidence 5678999999997 7654 3445566666
No 78
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=66.49 E-value=20 Score=30.28 Aligned_cols=27 Identities=33% Similarity=0.374 Sum_probs=19.1
Q ss_pred CCceEEEEeCCCc-hHHH--HHHHHHHccC
Q 012218 353 DRSKVIVMDADGT-RSKG--IARSLRKLGV 379 (468)
Q Consensus 353 kd~~IVVyC~sG~-RS~~--AA~~L~~~Gf 379 (468)
.+.+|+|+|..|. ||.. ++..+...|.
T Consensus 80 ~~~~VlVHC~~G~~RS~~~~~aylm~~~~~ 109 (144)
T 3ezz_A 80 CRGRVLVHSQAGISRSATICLAYLMMKKRV 109 (144)
T ss_dssp TTCCEEEEESSSSSHHHHHHHHHHHHHHTC
T ss_pred cCCeEEEECCCCCChhHHHHHHHHHHHcCC
Confidence 4678999999997 7764 3444555666
No 79
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=66.17 E-value=12 Score=31.97 Aligned_cols=27 Identities=19% Similarity=0.235 Sum_probs=19.3
Q ss_pred CCceEEEEeCCC-chHHHH--HHHHHHccC
Q 012218 353 DRSKVIVMDADG-TRSKGI--ARSLRKLGV 379 (468)
Q Consensus 353 kd~~IVVyC~sG-~RS~~A--A~~L~~~Gf 379 (468)
.+.+|+|+|..| .||..+ ++.+...|.
T Consensus 82 ~~~~VlVHC~~G~~RSg~~~~ayl~~~~~~ 111 (149)
T 1zzw_A 82 CGKGLLIHCQAGVSRSATIVIAYLMKHTRM 111 (149)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHHSCC
T ss_pred cCCeEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 567999999999 487764 344555665
No 80
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens}
Probab=64.63 E-value=16 Score=34.05 Aligned_cols=27 Identities=26% Similarity=0.327 Sum_probs=20.0
Q ss_pred CCceEEEEeCCCc-hHHH--HHHHHHHccC
Q 012218 353 DRSKVIVMDADGT-RSKG--IARSLRKLGV 379 (468)
Q Consensus 353 kd~~IVVyC~sG~-RS~~--AA~~L~~~Gf 379 (468)
.+.+|+|+|..|. ||.. +++.++..|+
T Consensus 82 ~~~~VLVHC~aG~sRSgtvv~AYLm~~~g~ 111 (211)
T 2g6z_A 82 KGGKVLVHSEAGISRSPTICMAYLMKTKQF 111 (211)
T ss_dssp TTCCEEEEESSSSSHHHHHHHHHHHHHHCC
T ss_pred cCCeEEEECCCCCCcHHHHHHHHHHHHcCC
Confidence 5678999999995 8764 4566666676
No 81
>1v8c_A MOAD related protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, protein binding; 1.60A {Thermus thermophilus} SCOP: d.15.3.1 d.129.5.1
Probab=62.19 E-value=1.1 Score=40.91 Aligned_cols=26 Identities=12% Similarity=0.001 Sum_probs=22.0
Q ss_pred cEEEEcCChhhHhhcCCCCCcccccccccccCcccccc
Q 012218 287 AVLIDVRHEDLRERDGIPDLRRGARFRYASVYLPEVGG 324 (468)
Q Consensus 287 avLIDVRs~~Ey~~gHIPGA~~a~~~~~~nIPl~el~~ 324 (468)
.++||||++.||+ |||. |+|...+.-
T Consensus 122 ~~liDvRe~~E~~----pgA~--------~iprg~lE~ 147 (168)
T 1v8c_A 122 GAVVRFREVEPLK----VGSL--------SIPQLRVEV 147 (168)
T ss_dssp TEEEEEEEEEEEE----ETTE--------EEEEEEEEE
T ss_pred eEEEECCChhhcC----CCCE--------EcChhHHHH
Confidence 5999999999999 9998 888765543
No 82
>1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A*
Probab=60.77 E-value=27 Score=34.12 Aligned_cols=31 Identities=19% Similarity=0.135 Sum_probs=21.6
Q ss_pred cccCHHHHHHHHhCCCCcEEEEcCChhhHhhc
Q 012218 270 GDLSPKSTLELLRGKENAVLIDVRHEDLRERD 301 (468)
Q Consensus 270 ~~ISp~el~elL~~~~~avLIDVRs~~Ey~~g 301 (468)
..++++++..+.+ -.=-.|||.|++.|....
T Consensus 54 ~~lt~~d~~~L~~-lGI~tVIDLR~~~E~~~~ 84 (296)
T 1ywf_A 54 SRLDDAGRATLRR-LGITDVADLRSSREVARR 84 (296)
T ss_dssp TTCCHHHHHHHHH-HTCCEEEECCCHHHHHHH
T ss_pred ccCCHHHHHHHHh-CCCCEEEECcChhhhhcc
Confidence 4688988776642 223579999999886543
No 83
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=60.12 E-value=29 Score=30.49 Aligned_cols=26 Identities=27% Similarity=0.331 Sum_probs=19.1
Q ss_pred CceEEEEeCCCc-hHHH--HHHHHHHccC
Q 012218 354 RSKVIVMDADGT-RSKG--IARSLRKLGV 379 (468)
Q Consensus 354 d~~IVVyC~sG~-RS~~--AA~~L~~~Gf 379 (468)
+.+|+|+|..|. ||.. ++..+...|.
T Consensus 115 ~~~VlVHC~~G~~RSg~~v~ayLm~~~~~ 143 (183)
T 3f81_A 115 NGRVLVHCREGYSRSPTLVIAYLMMRQKM 143 (183)
T ss_dssp TCCEEEECSSSSSHHHHHHHHHHHHHHCC
T ss_pred CCeEEEECCCCcchHHHHHHHHHHHHhCC
Confidence 678999999996 8766 3344566776
No 84
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=59.55 E-value=24 Score=31.57 Aligned_cols=28 Identities=21% Similarity=0.195 Sum_probs=19.1
Q ss_pred CCCceEEEEeCCCc-hHHHH-HHHHHHccC
Q 012218 352 QDRSKVIVMDADGT-RSKGI-ARSLRKLGV 379 (468)
Q Consensus 352 ~kd~~IVVyC~sG~-RS~~A-A~~L~~~Gf 379 (468)
.++.+|+|+|..|. |+..+ +..|...|.
T Consensus 115 ~~~~~VlVHC~aG~gRSg~~va~~L~~~g~ 144 (189)
T 3rz2_A 115 EPGCCIAVHCVAGLGRAPVLVALALIEGGM 144 (189)
T ss_dssp STTCEEEEECSSSSTTHHHHHHHHHHTTTC
T ss_pred CCCCcEEEECCCCCCHHHHHHHHHHHHcCC
Confidence 56789999999986 77653 334444454
No 85
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens}
Probab=59.32 E-value=31 Score=30.93 Aligned_cols=28 Identities=18% Similarity=0.310 Sum_probs=20.3
Q ss_pred CCceEEEEeCCC-chHHH--HHHHHHHccCC
Q 012218 353 DRSKVIVMDADG-TRSKG--IARSLRKLGVM 380 (468)
Q Consensus 353 kd~~IVVyC~sG-~RS~~--AA~~L~~~Gf~ 380 (468)
.+.+|+|+|..| .||.. +|..++..|.+
T Consensus 96 ~~~~VLVHC~aG~sRS~~vv~ayLm~~~~~s 126 (188)
T 2esb_A 96 KQGRTLLHCAAGVSRSAALCLAYLMKYHAMS 126 (188)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHSCCC
T ss_pred cCCEEEEECCCCCchHHHHHHHHHHHHcCCC
Confidence 567899999999 48774 35556666763
No 86
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens}
Probab=56.41 E-value=32 Score=30.96 Aligned_cols=27 Identities=30% Similarity=0.292 Sum_probs=20.0
Q ss_pred CCceEEEEeCCCc-hHHH--HHHHHHHccC
Q 012218 353 DRSKVIVMDADGT-RSKG--IARSLRKLGV 379 (468)
Q Consensus 353 kd~~IVVyC~sG~-RS~~--AA~~L~~~Gf 379 (468)
.+.+|+|+|..|. ||.. +++.+...|.
T Consensus 102 ~~~~VlVHC~aG~~RSgtvv~ayLm~~~~~ 131 (190)
T 2wgp_A 102 KHGATLVHCAAGVSRSATLCIAYLMKFHNV 131 (190)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHHCC
T ss_pred cCCCEEEECCCCCCHHHHHHHHHHHHHcCC
Confidence 4678999999994 8764 3556666776
No 87
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase, hypothetical protein; 2.7A {Saccharomyces cerevisiae} PDB: 2j17_A* 2j16_B
Probab=55.10 E-value=17 Score=33.07 Aligned_cols=27 Identities=26% Similarity=0.369 Sum_probs=19.4
Q ss_pred CCceEEEEeCCCc-hHHH--HHHHHHHccC
Q 012218 353 DRSKVIVMDADGT-RSKG--IARSLRKLGV 379 (468)
Q Consensus 353 kd~~IVVyC~sG~-RS~~--AA~~L~~~Gf 379 (468)
.+.+|+|+|..|. ||.. +|..++..|.
T Consensus 116 ~g~~VLVHC~~G~sRS~tvv~ayLm~~~~~ 145 (182)
T 2j16_A 116 KREKILIHAQCGLSRSATLIIAYIMKYHNL 145 (182)
T ss_dssp TTCCEEEEESSCCSHHHHHHHHHHHHHTTC
T ss_pred cCCeEEEECCCCCChHHHHHHHHHHHHcCC
Confidence 5678999999996 7765 4455566665
No 88
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens}
Probab=54.77 E-value=24 Score=31.24 Aligned_cols=27 Identities=19% Similarity=0.217 Sum_probs=19.1
Q ss_pred CCceEEEEeCCCc-hHHHH--HHHHHHccC
Q 012218 353 DRSKVIVMDADGT-RSKGI--ARSLRKLGV 379 (468)
Q Consensus 353 kd~~IVVyC~sG~-RS~~A--A~~L~~~Gf 379 (468)
.+.+|+|+|..|. ||..+ +..++..|.
T Consensus 86 ~~~~VlVHC~aG~~RSg~~v~ayLm~~~~~ 115 (177)
T 2oud_A 86 CGKGLLIHCQAGVSRSATIVIAYLMKHTRM 115 (177)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHTSCC
T ss_pred cCCcEEEEcCCCCCchHHHHHHHHHHHcCC
Confidence 5679999999994 87764 344555665
No 89
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=53.07 E-value=15 Score=32.17 Aligned_cols=28 Identities=14% Similarity=0.268 Sum_probs=19.9
Q ss_pred CCceEEEEeCCCc-hHHH--HHHHHHHccCC
Q 012218 353 DRSKVIVMDADGT-RSKG--IARSLRKLGVM 380 (468)
Q Consensus 353 kd~~IVVyC~sG~-RS~~--AA~~L~~~Gf~ 380 (468)
.+.+|+|+|..|. ||.. +|..++..|++
T Consensus 86 ~~~~VlVHC~~G~sRS~~vv~ayLm~~~~~s 116 (161)
T 3emu_A 86 RKEGVLIISGTGVNKAPAIVIAFLMYYQRLS 116 (161)
T ss_dssp TTCEEEEEESSSSSHHHHHHHHHHHHHTTCC
T ss_pred cCCeEEEEcCCCCcHHHHHHHHHHHHHhCCC
Confidence 4578999999997 7654 34556667763
No 90
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=53.03 E-value=4.7 Score=40.76 Aligned_cols=48 Identities=17% Similarity=0.010 Sum_probs=32.9
Q ss_pred ccCCCCCCCchHH-Hh-hhhhHhhhhhcccccchHHHHHHHHHHHHHhcCC
Q 012218 189 GTTKESLPPEIRD-AL-NLYEDRAVKLWRPVGSALQQVSVAIEGLERSLGF 237 (468)
Q Consensus 189 G~~~~~l~p~~~~-~~-~~~e~~~~~v~~p~g~~~~q~~~~ie~le~~lgf 237 (468)
++||+|++|..++ .. +.+-+..-.|++|.-+..+ ..+++|.|+.++++
T Consensus 193 ~~Cy~C~~~~~p~~~~~~~t~~~~c~v~~p~vg~ig-s~qA~E~lk~l~~~ 242 (340)
T 3rui_A 193 LGCYFCHDVVAPTDSLTDRTLDQMSTVTRPGVAMMA-SSLAVELMTSLLQT 242 (340)
T ss_dssp BCCGGGGSSSCCCCCTTTCCCGGGGGCSCHHHHHHH-HHHHHHHHHHHTSC
T ss_pred CCeeeeCCCCCCcccccccccCCCcceecchHHHHH-HHHHHHHHHHHhCC
Confidence 5899999754432 11 1000111239999999999 99999999999885
No 91
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=51.54 E-value=6.9 Score=39.33 Aligned_cols=46 Identities=13% Similarity=0.031 Sum_probs=26.1
Q ss_pred ccCCCCCCCc--hHH-----------HhhhhhHhhhhhcccccchHHHHHHHHHHHHHhcCC
Q 012218 189 GTTKESLPPE--IRD-----------ALNLYEDRAVKLWRPVGSALQQVSVAIEGLERSLGF 237 (468)
Q Consensus 189 G~~~~~l~p~--~~~-----------~~~~~e~~~~~v~~p~g~~~~q~~~~ie~le~~lgf 237 (468)
++||+|++|. ..+ .+..|.+.+ +++|+.+.++ ..++.|.++-+.|+
T Consensus 258 ~~C~~C~~~~~~~~~~~~~~~~~~c~~~~~~~~~g--v~~~~~~iig-~l~a~Ealk~l~g~ 316 (353)
T 3h5n_A 258 TGCYECQKVVADLYGSEKENIDHKIKLINSRFKPA--TFAPVNNVAA-ALCAADVIKFIGKY 316 (353)
T ss_dssp SCCTTTTC---------CHHHHHHHHHHHHTCCCC--CCHHHHHHHH-HHHHHHHHHHHHCS
T ss_pred CCChhhcCCCcCCCccccchhhhhhhhhcccccCC--chhhHHHHHH-HHHHHHHHHHhcCC
Confidence 6999999872 221 222333445 6777666666 66666666666553
No 92
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=47.92 E-value=24 Score=33.67 Aligned_cols=45 Identities=16% Similarity=0.127 Sum_probs=33.0
Q ss_pred ceEEEEeCCCc---hHHHHHHHHHHccCCCEEEe-cc----------hHHHHHHcCCCcc
Q 012218 355 SKVIVMDADGT---RSKGIARSLRKLGVMRAFLV-QG----------GFQSWVKEGLRIK 400 (468)
Q Consensus 355 ~~IVVyC~sG~---RS~~AA~~L~~~Gf~nV~vL-dG----------G~~aW~~aGLPv~ 400 (468)
++|+|+|..|+ ....+|+.|...||+ |.++ -+ -++.|++.|.++.
T Consensus 59 ~~v~VlcG~GNNGGDGlv~AR~L~~~G~~-V~v~~~~~~~~~~~~~~~~~~~~~~g~~~~ 117 (246)
T 1jzt_A 59 KHVFVIAGPGNNGGDGLVCARHLKLFGYN-PVVFYPKRSERTEFYKQLVHQLNFFKVPVL 117 (246)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCC-EEEECCCCCTTCHHHHHHHHHHHHTTCCEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEEEcCCCCCCHHHHHHHHHHHHcCCcEE
Confidence 58999999887 567899999999995 5443 22 2456777787764
No 93
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=45.63 E-value=31 Score=31.33 Aligned_cols=24 Identities=25% Similarity=0.173 Sum_probs=16.9
Q ss_pred CCceEEEEeCCCc-hHHHH-HHHHHH
Q 012218 353 DRSKVIVMDADGT-RSKGI-ARSLRK 376 (468)
Q Consensus 353 kd~~IVVyC~sG~-RS~~A-A~~L~~ 376 (468)
.+.+|+|+|..|. |+..+ +..|..
T Consensus 132 ~~~~VlVHC~aG~gRTg~~~a~~L~~ 157 (212)
T 1fpz_A 132 NYRKTLIHSYGGLGRSCLVAACLLLY 157 (212)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHHHHH
Confidence 5678999999986 76654 344544
No 94
>2jgn_A DBX, DDX3, ATP-dependent RNA helicase DDX3X; phosphorylation, nucleotide-binding, hydrolase, RNA-binding, ATP-binding, DNA-binding, nuclear protein; 1.91A {Homo sapiens}
Probab=44.90 E-value=18 Score=32.22 Aligned_cols=38 Identities=13% Similarity=0.116 Sum_probs=29.4
Q ss_pred CCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHH
Q 012218 352 QDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQ 390 (468)
Q Consensus 352 ~kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~~ 390 (468)
.++.++||+|++-..+...+..|+..|+ .+..+.|++.
T Consensus 44 ~~~~k~lVF~~~~~~~~~l~~~L~~~g~-~~~~lhg~~~ 81 (185)
T 2jgn_A 44 GKDSLTLVFVETKKGADSLEDFLYHEGY-ACTSIHGDRS 81 (185)
T ss_dssp -CCSCEEEEESCHHHHHHHHHHHHHTTC-CEEEEC----
T ss_pred CCCCeEEEEECCHHHHHHHHHHHHHcCC-ceEEEeCCCC
Confidence 3567899999998888999999999998 6889999874
No 95
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Probab=44.25 E-value=33 Score=28.86 Aligned_cols=28 Identities=18% Similarity=0.167 Sum_probs=18.8
Q ss_pred CCCceEEEEeCCCc-hHHHHH-HHHHHccC
Q 012218 352 QDRSKVIVMDADGT-RSKGIA-RSLRKLGV 379 (468)
Q Consensus 352 ~kd~~IVVyC~sG~-RS~~AA-~~L~~~Gf 379 (468)
+++.+|+|+|..|. |+...+ -.|...|.
T Consensus 94 ~~~~~vlVHC~aG~~Rtg~~~a~~l~~~~~ 123 (159)
T 1rxd_A 94 EPGCCIAVHCVAGLGRAPVLVALALIEGGM 123 (159)
T ss_dssp STTCEEEEECSSSSTTHHHHHHHHHHHTTC
T ss_pred CCCCeEEEECCCCCCHHHHHHHHHHHHhCC
Confidence 45689999999985 776543 34444454
No 96
>3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A
Probab=43.69 E-value=39 Score=29.64 Aligned_cols=28 Identities=29% Similarity=0.273 Sum_probs=18.8
Q ss_pred CCceEEEEeCCCc-hHHHH--HHHHHHccCC
Q 012218 353 DRSKVIVMDADGT-RSKGI--ARSLRKLGVM 380 (468)
Q Consensus 353 kd~~IVVyC~sG~-RS~~A--A~~L~~~Gf~ 380 (468)
.+.+|+|+|..|. ||..+ +..+...|..
T Consensus 107 ~~~~VlVHC~aG~~RSg~~v~aylm~~~~~~ 137 (176)
T 3cm3_A 107 RNEPVLVHSAAGVNRSGAMILAYLMSKNKES 137 (176)
T ss_dssp HTCCEEEECSSSSSHHHHHHHHHHHHHCCSS
T ss_pred CCCcEEEECCcCCCHHHHHHHHHHHHHhCCC
Confidence 3578999999995 77653 3445555653
No 97
>2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR}
Probab=43.25 E-value=63 Score=29.05 Aligned_cols=27 Identities=26% Similarity=0.217 Sum_probs=18.0
Q ss_pred CCceEEEEeCCC-chHHHHHH--HHHHccC
Q 012218 353 DRSKVIVMDADG-TRSKGIAR--SLRKLGV 379 (468)
Q Consensus 353 kd~~IVVyC~sG-~RS~~AA~--~L~~~Gf 379 (468)
.+.+|+|+|..| .|+..++- .+...|.
T Consensus 124 ~~~~VlVHC~aG~~RSg~~v~~yL~~~~~~ 153 (195)
T 2q05_A 124 RNEPVLVHCAAGVNRSGAMILAYLMSKNKE 153 (195)
T ss_dssp TTCCEEEECSSSSSHHHHHHHHHHHHHCCS
T ss_pred cCCcEEEEcCCCCChHHHHHHHHHHHHhCC
Confidence 467899999999 47765433 3344555
No 98
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=42.24 E-value=51 Score=27.91 Aligned_cols=24 Identities=17% Similarity=0.102 Sum_probs=16.5
Q ss_pred CCceEEEEeCCCc-hHHHHH-HHHHH
Q 012218 353 DRSKVIVMDADGT-RSKGIA-RSLRK 376 (468)
Q Consensus 353 kd~~IVVyC~sG~-RS~~AA-~~L~~ 376 (468)
++.+|+|+|..|. |+..++ ..|..
T Consensus 108 ~~~~vlVHC~aG~~RTg~~~a~~L~~ 133 (167)
T 3s4o_A 108 PPPTIGVHCVAGLGRAPILVALALVE 133 (167)
T ss_dssp CCCEEEEECSSSSSHHHHHHHHHHHH
T ss_pred CCCcEEEECCCCCCHHHHHHHHHHHH
Confidence 4679999999986 765533 33444
No 99
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=41.56 E-value=43 Score=32.48 Aligned_cols=45 Identities=18% Similarity=0.164 Sum_probs=32.7
Q ss_pred ceEEEEeCCCc---hHHHHHHHHHHccCCCEEEe-cc---------hHHHHHHcCCCcc
Q 012218 355 SKVIVMDADGT---RSKGIARSLRKLGVMRAFLV-QG---------GFQSWVKEGLRIK 400 (468)
Q Consensus 355 ~~IVVyC~sG~---RS~~AA~~L~~~Gf~nV~vL-dG---------G~~aW~~aGLPv~ 400 (468)
++|+|+|..|+ ....+|+.|...||+ |.++ -+ -++.|++.|.++.
T Consensus 80 ~~VlVlcG~GNNGGDGlv~AR~L~~~G~~-V~V~~~~~~~~~~~~~~~~~~~~~g~~~~ 137 (265)
T 2o8n_A 80 PTVLVICGPGNNGGDGLVCARHLKLFGYQ-PTIYYPKRPNKPLFTGLVTQCQKMDIPFL 137 (265)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEECCSCCSSHHHHHHHHHHHHTTCCBC
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCc-EEEEEeCCCCCHHHHHHHHHHHHcCCcEE
Confidence 58999999877 567899999999994 5543 22 2356777777764
No 100
>1t5i_A C_terminal domain of A probable ATP-dependent RNA helicase; RECA-like fold, PRE-mRNA processing protein; 1.90A {Homo sapiens} SCOP: c.37.1.19
Probab=41.40 E-value=36 Score=29.75 Aligned_cols=37 Identities=16% Similarity=0.267 Sum_probs=31.8
Q ss_pred CCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHH
Q 012218 353 DRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQ 390 (468)
Q Consensus 353 kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~~ 390 (468)
+..+++|+|++-..+...+..|...|+ ++..+.|++.
T Consensus 30 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~hg~~~ 66 (172)
T 1t5i_A 30 EFNQVVIFVKSVQRCIALAQLLVEQNF-PAIAIHRGMP 66 (172)
T ss_dssp CCSSEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTSC
T ss_pred CCCcEEEEECCHHHHHHHHHHHHhcCC-CEEEEECCCC
Confidence 456799999998889999999999998 6888999863
No 101
>2hjv_A ATP-dependent RNA helicase DBPA; parallel alpha-beta, hydrolase; 1.95A {Bacillus subtilis}
Probab=41.05 E-value=30 Score=29.81 Aligned_cols=36 Identities=17% Similarity=0.317 Sum_probs=31.3
Q ss_pred CCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchH
Q 012218 353 DRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGF 389 (468)
Q Consensus 353 kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~ 389 (468)
+..+++++|++-..+...+..|...|+ ++..+.|++
T Consensus 34 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~hg~~ 69 (163)
T 2hjv_A 34 NPDSCIIFCRTKEHVNQLTDELDDLGY-PCDKIHGGM 69 (163)
T ss_dssp CCSSEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTS
T ss_pred CCCcEEEEECCHHHHHHHHHHHHHcCC-cEEEEeCCC
Confidence 345799999998889999999999998 688999986
No 102
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=40.10 E-value=13 Score=40.59 Aligned_cols=48 Identities=15% Similarity=-0.020 Sum_probs=32.4
Q ss_pred ccCCCCCCCchHH-H-hhhhhHhhhhhcccccchHHHHHHHHHHHHHhcCC
Q 012218 189 GTTKESLPPEIRD-A-LNLYEDRAVKLWRPVGSALQQVSVAIEGLERSLGF 237 (468)
Q Consensus 189 G~~~~~l~p~~~~-~-~~~~e~~~~~v~~p~g~~~~q~~~~ie~le~~lgf 237 (468)
++||+|++|..+. . .+.+-+..-.|++|.-+..+ ..+++|.|+.++++
T Consensus 485 ~~CY~Cl~~~~P~~~~~~rtl~~~C~Vl~P~vgiig-s~qA~EaLk~Ll~~ 534 (615)
T 4gsl_A 485 LGCYFCHDVVAPTDSLTDRTLDQMCTVTRPGVAMMA-SSLAVELMTSLLQT 534 (615)
T ss_dssp CCCTTTSCSSCTTSCTTTTTTTCTTCCCCHHHHHHH-HHHHHHHHHHHHSC
T ss_pred CCceeeCCCCCCcccccccccccCcceecchHHHHH-HHHHHHHHHHHhCC
Confidence 5899999754432 1 11000111239999999988 89999999999885
No 103
>4fak_A Ribosomal RNA large subunit methyltransferase H; alpha/beta methyltransferase rossmann fold, rRNA methylation rRNA, ribosomal protein; HET: SAM PG4; 1.70A {Staphylococcus aureus} PDB: 1vh0_A
Probab=37.81 E-value=45 Score=30.19 Aligned_cols=43 Identities=30% Similarity=0.509 Sum_probs=34.2
Q ss_pred hcccCCCceEEEEeCCCc--hHHHHHHHHHH---ccCCCEEEecchHH
Q 012218 348 LKIVQDRSKVIVMDADGT--RSKGIARSLRK---LGVMRAFLVQGGFQ 390 (468)
Q Consensus 348 Lk~l~kd~~IVVyC~sG~--RS~~AA~~L~~---~Gf~nV~vLdGG~~ 390 (468)
++.++++..+|+.|-.|. .|...|..|.+ .|..++..+-||-.
T Consensus 68 l~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~g~~~i~FvIGG~~ 115 (163)
T 4fak_A 68 LAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQGQSDFVFVIGGSN 115 (163)
T ss_dssp HHTCCTTSEEEEEEEEEEECCHHHHHHHHHHHHHTTCCEEEEEECBTT
T ss_pred HHhCCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCcceEEEEECCC
Confidence 455677888999998886 78888988866 57778999999854
No 104
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana}
Probab=36.64 E-value=52 Score=31.97 Aligned_cols=26 Identities=15% Similarity=0.141 Sum_probs=17.7
Q ss_pred CceEEEEeCCCc-hHHH-H-HHHHHHccC
Q 012218 354 RSKVIVMDADGT-RSKG-I-ARSLRKLGV 379 (468)
Q Consensus 354 d~~IVVyC~sG~-RS~~-A-A~~L~~~Gf 379 (468)
+.+|+|+|..|. ||.. + |..+...|.
T Consensus 106 g~~VLVHC~aG~sRS~tvv~ayLm~~~g~ 134 (294)
T 3nme_A 106 GGVTYVHSTAGMGRAPAVALTYMFWVQGY 134 (294)
T ss_dssp CSEEEEECSSSSSHHHHHHHHHHHHTSCC
T ss_pred CCEEEEECCCCCchhHHHHHHHHHHHhCC
Confidence 568999999997 7654 3 334454565
No 105
>1fuk_A Eukaryotic initiation factor 4A; helicase, DEAD-box protein, translation; 1.75A {Saccharomyces cerevisiae} SCOP: c.37.1.19
Probab=35.70 E-value=60 Score=27.79 Aligned_cols=36 Identities=6% Similarity=0.135 Sum_probs=31.3
Q ss_pred CCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchH
Q 012218 353 DRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGF 389 (468)
Q Consensus 353 kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~ 389 (468)
+..+++++|++-..+...+..|+..|+ .+..+.|++
T Consensus 29 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~~~~~ 64 (165)
T 1fuk_A 29 SVTQAVIFCNTRRKVEELTTKLRNDKF-TVSAIYSDL 64 (165)
T ss_dssp TCSCEEEEESSHHHHHHHHHHHHHTTC-CEEEECTTS
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCC-CEEEEECCC
Confidence 456799999998889999999999998 688899986
No 106
>2rb4_A ATP-dependent RNA helicase DDX25; rossmann fold, structural genomics, structural consortium, SGC, alternative initiation, ATP-binding, devel protein; 2.80A {Homo sapiens}
Probab=35.27 E-value=27 Score=30.42 Aligned_cols=36 Identities=14% Similarity=0.196 Sum_probs=31.6
Q ss_pred CCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchH
Q 012218 353 DRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGF 389 (468)
Q Consensus 353 kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~ 389 (468)
+..++||+|++-..+...+..|...|+ .+..+.|++
T Consensus 33 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~~~g~~ 68 (175)
T 2rb4_A 33 TIGQAIIFCQTRRNAKWLTVEMIQDGH-QVSLLSGEL 68 (175)
T ss_dssp CCSEEEEECSCHHHHHHHHHHHHTTTC-CEEEECSSC
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCC-cEEEEeCCC
Confidence 456899999998888999999999998 688999986
No 107
>3d3k_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.20A {Homo sapiens}
Probab=35.03 E-value=37 Score=32.66 Aligned_cols=30 Identities=17% Similarity=0.191 Sum_probs=24.0
Q ss_pred ceEEEEeCCCc---hHHHHHHHHHHccCCCEEEe
Q 012218 355 SKVIVMDADGT---RSKGIARSLRKLGVMRAFLV 385 (468)
Q Consensus 355 ~~IVVyC~sG~---RS~~AA~~L~~~Gf~nV~vL 385 (468)
.+|+|+|..|+ ....+|+.|...||+ |.++
T Consensus 86 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~-V~v~ 118 (259)
T 3d3k_A 86 PTVALLCGPHVKGAQGISCGRHLANHDVQ-VILF 118 (259)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCe-EEEE
Confidence 58999999887 567899999999995 5433
No 108
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A
Probab=33.36 E-value=76 Score=31.71 Aligned_cols=28 Identities=11% Similarity=0.233 Sum_probs=18.8
Q ss_pred CCCceEEEEeCCCc-hHHHHH--HHHHHccC
Q 012218 352 QDRSKVIVMDADGT-RSKGIA--RSLRKLGV 379 (468)
Q Consensus 352 ~kd~~IVVyC~sG~-RS~~AA--~~L~~~Gf 379 (468)
.++.+|+|+|..|. |+..++ ..+...|.
T Consensus 267 ~~~~~VLVHC~aG~gRTGtvvaayLm~~~g~ 297 (348)
T 1ohe_A 267 NAEGAIAVHSKAGLGRTGTLIACYIMKHYRM 297 (348)
T ss_dssp SCSSEEEEECSSSSHHHHHHHHHHHHHHHCC
T ss_pred hCCCcEEEECCCCCChHHHHHHHHHHHHcCC
Confidence 45789999999995 766533 33343665
No 109
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=31.93 E-value=41 Score=35.53 Aligned_cols=48 Identities=15% Similarity=0.157 Sum_probs=35.1
Q ss_pred CCceEEEEeCCCc---hHHHHHHHHHHccCC-CEEEecch--------HHHHHHcCCCcc
Q 012218 353 DRSKVIVMDADGT---RSKGIARSLRKLGVM-RAFLVQGG--------FQSWVKEGLRIK 400 (468)
Q Consensus 353 kd~~IVVyC~sG~---RS~~AA~~L~~~Gf~-nV~vLdGG--------~~aW~~aGLPv~ 400 (468)
+.++|+|+|..|+ ....+|+.|...||+ .|+.+..- ++.|++.|.++.
T Consensus 51 ~~~~v~VlcG~GNNGGDGlv~AR~L~~~G~~V~v~~~~~~~~~~~~~~~~~~~~~g~~~~ 110 (502)
T 3rss_A 51 SDYRFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGKKKTPDCEYNYGLYKKFGGKVV 110 (502)
T ss_dssp TTCEEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCSSCCHHHHHHHHHHHHTTCCEE
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCCeEEEEEECCCCCHHHHHHHHHHHhCCCcee
Confidence 4678999999887 467789999999995 33333221 467888888875
No 110
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=31.77 E-value=36 Score=28.42 Aligned_cols=28 Identities=14% Similarity=0.184 Sum_probs=19.1
Q ss_pred CCceEEEEeCCCchHHH-HHHH----HHHccCC
Q 012218 353 DRSKVIVMDADGTRSKG-IARS----LRKLGVM 380 (468)
Q Consensus 353 kd~~IVVyC~sG~RS~~-AA~~----L~~~Gf~ 380 (468)
+-.+|+++|.+|..+.. ++.. +.+.|++
T Consensus 20 ~~kkIlvvC~sG~gTS~ll~~kl~~~~~~~gi~ 52 (113)
T 1tvm_A 20 SKRKIIVACGGAVATSTMAAEEIKELCQSHNIP 52 (113)
T ss_dssp SSEEEEEESCSCSSHHHHHHHHHHHHHHHTTCC
T ss_pred cccEEEEECCCCHHHHHHHHHHHHHHHHHcCCe
Confidence 34579999999985444 4544 5567774
No 111
>3d3j_A Enhancer of mRNA-decapping protein 3; HEDC3, phosphoprotein, protein binding; 2.80A {Homo sapiens}
Probab=31.66 E-value=44 Score=32.99 Aligned_cols=30 Identities=17% Similarity=0.191 Sum_probs=24.0
Q ss_pred ceEEEEeCCCc---hHHHHHHHHHHccCCCEEEe
Q 012218 355 SKVIVMDADGT---RSKGIARSLRKLGVMRAFLV 385 (468)
Q Consensus 355 ~~IVVyC~sG~---RS~~AA~~L~~~Gf~nV~vL 385 (468)
.+|+|+|..|+ ....+|+.|...||+ |.++
T Consensus 133 ~~vlVlcG~GNNGGDGlv~AR~L~~~G~~-V~V~ 165 (306)
T 3d3j_A 133 PTVALLCGPHVKGAQGISCGRHLANHDVQ-VILF 165 (306)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHHTTCE-EEEE
T ss_pred CeEEEEECCCCCHHHHHHHHHHHHHCCCc-EEEE
Confidence 58999999877 567899999999994 5443
No 112
>3ghg_B Fibrinogen beta chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_B* 1deq_B 2a45_H*
Probab=31.63 E-value=48 Score=34.86 Aligned_cols=103 Identities=14% Similarity=0.172 Sum_probs=68.9
Q ss_pred CchhhhhhhhhhHHhhhhhhhhhhhhhhhhHHHHHhHHhhhhhHhhhhhhhhHhHHHHHhhhhhhhcccCCCcCCCcccc
Q 012218 68 NSSISNIKSSFDDFLAGVNESFSSSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSKLTNF 147 (468)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 147 (468)
=.++==+-=.+.|+|-.-+..+.+.|..-|+-|++ ++..|++++..++..+..+...=...... | . .++..
T Consensus 72 fG~yCPTtCglad~L~kye~~V~~dl~~Le~~l~~-isn~Ts~a~~~v~~ik~s~~~~q~~~~~n-~----~---~~~~s 142 (461)
T 3ghg_B 72 LGVLCPTGCQLQEALLQQERPIRNSVDELNNNVEA-VSQTSSSSFQYMYLLKDLWQKRQKQVKDN-E----N---VVNEY 142 (461)
T ss_dssp TCBCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHTHHHHHHHHHHHHHHHHHHH-H----H---TTSCH
T ss_pred cCCcCCCcchHHHHHHhcccchhhHHHHHHHHHHH-HHhhhHHHHHHHHHHHHHhccccCCCCcc-h----h---HHHHH
Confidence 34555566678899999999999999999999998 88889988888877776655443332222 1 1 22333
Q ss_pred cchh-------HHHhhhccchhHHHHHHHHHHhhhhccc
Q 012218 148 STDL-------KEASSKATVAAVDVLRNTIVALEESMTN 179 (468)
Q Consensus 148 ~~~~-------~~~~~~a~~~~~d~l~~~~~~~~~~~~~ 179 (468)
+..| ++.+...-+-++++||..+..+..-|.+
T Consensus 143 ~~mle~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~i~~ 181 (461)
T 3ghg_B 143 SSELEKHQLYIDETVNSNIPTNLRVLRSILENLRSKIQK 181 (461)
T ss_dssp HHHHHHHHTHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhccchhHHHHHHHHHHHHHHHHHH
Confidence 3333 3346666777888888777665555443
No 113
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=31.26 E-value=12 Score=35.42 Aligned_cols=44 Identities=14% Similarity=0.098 Sum_probs=17.5
Q ss_pred ccCCCCCCCchHHHhhhhhHhhhhhcccccchHHHHHHHHHHHHHhc
Q 012218 189 GTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVSVAIEGLERSL 235 (468)
Q Consensus 189 G~~~~~l~p~~~~~~~~~e~~~~~v~~p~g~~~~q~~~~ie~le~~l 235 (468)
++|++|++|+..+....|.+.+ +++|+.+.++ ..++.|.++.++
T Consensus 167 ~~c~~cl~~~~~~~~~~~~~~g--~~~p~~~~~g-~~~A~e~lk~l~ 210 (251)
T 1zud_1 167 QGCYRCLWPDNQEPERNCRTAG--VVGPVVGVMG-TLQALEAIKLLS 210 (251)
T ss_dssp TCCHHHHCC-----------CC--BCHHHHHHHH-HHHHHHHHHHHH
T ss_pred CCcEEEeCCCCCCCCCccccCC--chHHHHHHHH-HHHHHHHHHHHh
Confidence 5799999886443322344433 4444444433 333333333333
No 114
>3eaq_A Heat resistant RNA dependent ATPase; DEAD box RNA helicase, dimer, ATP-binding, helicase, hydrolase, nucleotide-binding; 2.30A {Thermus thermophilus} PDB: 3ear_A 3eas_A
Probab=31.08 E-value=51 Score=29.82 Aligned_cols=36 Identities=22% Similarity=0.394 Sum_probs=31.2
Q ss_pred CCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchH
Q 012218 353 DRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGF 389 (468)
Q Consensus 353 kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~ 389 (468)
+..+++|+|++-..+...+..|...|+ .+..+.|++
T Consensus 30 ~~~~~lVF~~~~~~~~~l~~~L~~~~~-~~~~lhg~~ 65 (212)
T 3eaq_A 30 SPDRAMVFTRTKAETEEIAQGLLRLGH-PAQALHGDL 65 (212)
T ss_dssp CCSCEEEECSSHHHHHHHHHHHHHHTC-CEEEECSSS
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHHcCC-CEEEEECCC
Confidence 456899999988888899999999998 688899986
No 115
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=30.40 E-value=9.6 Score=36.11 Aligned_cols=45 Identities=11% Similarity=0.094 Sum_probs=21.2
Q ss_pred ccCCCCCCCchHHHhhhhhHhhhhhcccccchHHHHHHHHHHHHHhcC
Q 012218 189 GTTKESLPPEIRDALNLYEDRAVKLWRPVGSALQQVSVAIEGLERSLG 236 (468)
Q Consensus 189 G~~~~~l~p~~~~~~~~~e~~~~~v~~p~g~~~~q~~~~ie~le~~lg 236 (468)
++|++|++|+..+....|.+.+ +++|+.+.++ ..++.|.++.+++
T Consensus 170 ~~c~~c~~~~~~~~~~~c~~~g--~~~~~~~~~g-~~~a~e~lk~l~g 214 (249)
T 1jw9_B 170 EPCYRCLSRLFGENALTCVEAG--VMAPLIGVIG-SLQAMEAIKMLAG 214 (249)
T ss_dssp CCCTHHHHTTCCC-------CC--BCHHHHHHHH-HHHHHHHHHHHHT
T ss_pred CCceEEECCCCCcccccccccC--CcchHHHHHH-HHHHHHHHHHHhC
Confidence 4799998876433222354444 5555544444 4444444444444
No 116
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=29.78 E-value=1.1e+02 Score=27.12 Aligned_cols=80 Identities=15% Similarity=0.186 Sum_probs=43.2
Q ss_pred CCceEEEEeCCCc----hHHHHHHHHHHccCCCEEEecchHHHHHHcCCCccccccccchhhchhhHHHHHHHhcCCCcE
Q 012218 353 DRSKVIVMDADGT----RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKSETALTILNEDAEAILEDINSSPVQ 428 (468)
Q Consensus 353 kd~~IVVyC~sG~----RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv~~~~~~~~l~i~~~~~e~~lq~ir~~~~~ 428 (468)
++.+.||++.+.. .-...+..|.+.|| +|..++= .+ .|..-........+.-+.++..++++.+...+..
T Consensus 44 ~~~p~vv~~hG~~~~~~~~~~~~~~l~~~g~-~v~~~d~--~G---~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (315)
T 4f0j_A 44 ANGRTILLMHGKNFCAGTWERTIDVLADAGY-RVIAVDQ--VG---FCKSSKPAHYQYSFQQLAANTHALLERLGVARAS 117 (315)
T ss_dssp CCSCEEEEECCTTCCGGGGHHHHHHHHHTTC-EEEEECC--TT---STTSCCCSSCCCCHHHHHHHHHHHHHHTTCSCEE
T ss_pred CCCCeEEEEcCCCCcchHHHHHHHHHHHCCC-eEEEeec--CC---CCCCCCCCccccCHHHHHHHHHHHHHHhCCCceE
Confidence 3445666665432 12346677888899 5776652 11 1211111111223333345566777777777788
Q ss_pred EEEEeecccc
Q 012218 429 FLGFGVSGRR 438 (468)
Q Consensus 429 lLg~llG~~~ 438 (468)
++|+=.|...
T Consensus 118 l~G~S~Gg~~ 127 (315)
T 4f0j_A 118 VIGHSMGGML 127 (315)
T ss_dssp EEEETHHHHH
T ss_pred EEEecHHHHH
Confidence 8888777644
No 117
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=29.42 E-value=74 Score=27.06 Aligned_cols=43 Identities=19% Similarity=0.265 Sum_probs=33.7
Q ss_pred CCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchHHHHHH
Q 012218 352 QDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGFQSWVK 394 (468)
Q Consensus 352 ~kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~ 394 (468)
+++-+|.+++..-.........|+..||..|..-..|..+|..
T Consensus 10 ~k~~rILiVDD~~~~r~~l~~~L~~~G~~~v~~a~~g~~al~~ 52 (134)
T 3to5_A 10 NKNMKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPM 52 (134)
T ss_dssp CTTCCEEEECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHH
T ss_pred CCCCEEEEEeCCHHHHHHHHHHHHHcCCcEEEEECCHHHHHHH
Confidence 5566788888776655677788999999878878888888764
No 118
>3zbh_A ESXA; unknown function, type 7 secretion, ESAT6 family proteins, W protein ESS; 1.94A {Geobacillus thermodenitrificans}
Probab=27.79 E-value=15 Score=28.93 Aligned_cols=47 Identities=4% Similarity=0.065 Sum_probs=32.5
Q ss_pred hhhhhhhhHHHHHhHHhhhhhHhhhhhhhhHhHHHHHhhhhhhhccc
Q 012218 90 SSSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQT 136 (468)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (468)
...+.+..+.+++-++.+.+.+......|.+.-..++...|...++.
T Consensus 18 A~~~~~~~~~i~~~l~~L~~~v~~L~~~W~G~a~~af~~~~~~~~~~ 64 (99)
T 3zbh_A 18 ARQYNVESSNVTELIARLDQMSHTLQGIWEGASSEAFIQQYQELRPS 64 (99)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccChHHHHHHHHHHHHHHH
Confidence 34445555666666777777777777788888777777777776643
No 119
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=27.06 E-value=54 Score=28.17 Aligned_cols=27 Identities=30% Similarity=0.411 Sum_probs=19.1
Q ss_pred CCceEEEEeCCC-chHHHH--HHHHHHccC
Q 012218 353 DRSKVIVMDADG-TRSKGI--ARSLRKLGV 379 (468)
Q Consensus 353 kd~~IVVyC~sG-~RS~~A--A~~L~~~Gf 379 (468)
.+.+|+|+|..| .||..+ +..++..|.
T Consensus 84 ~~~~VlVHC~~G~~RS~~vv~ayLm~~~~~ 113 (155)
T 2hxp_A 84 QNCGVLVHSLAGVSRSVTVTVAYLMQKLHL 113 (155)
T ss_dssp TTCEEEEECSSSSSHHHHHHHHHHHHHHTC
T ss_pred cCCcEEEECCCCCchhHHHHHHHHHHHcCC
Confidence 567999999999 487743 444555665
No 120
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A
Probab=27.00 E-value=42 Score=31.68 Aligned_cols=27 Identities=22% Similarity=0.105 Sum_probs=17.2
Q ss_pred CCceEEEEeCCCc-hHHH-HHHHH-HHccC
Q 012218 353 DRSKVIVMDADGT-RSKG-IARSL-RKLGV 379 (468)
Q Consensus 353 kd~~IVVyC~sG~-RS~~-AA~~L-~~~Gf 379 (468)
++.+|+|+|..|. |+.. ++..| +..|+
T Consensus 140 ~~~~VlVHC~aG~gRTGt~ia~yLm~~~~~ 169 (241)
T 2c46_A 140 PPELIGVHCTHGFNRTGFLICAFLVEKMDW 169 (241)
T ss_dssp -CEEEEEECSSSSHHHHHHHHHHHHHTTCC
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHHHhCC
Confidence 3579999999986 6654 33334 43565
No 121
>3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis}
Probab=26.49 E-value=1.1e+02 Score=26.40 Aligned_cols=80 Identities=14% Similarity=0.114 Sum_probs=43.5
Q ss_pred ceEEEEeCCCc-h-----HHHHHHHHHHccCCCEEEecchHHHHHHcCCCccccccccchhhchhhHHHHHHHhcCCCcE
Q 012218 355 SKVIVMDADGT-R-----SKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKSETALTILNEDAEAILEDINSSPVQ 428 (468)
Q Consensus 355 ~~IVVyC~sG~-R-----S~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv~~~~~~~~l~i~~~~~e~~lq~ir~~~~~ 428 (468)
.+.|+++.+.. . ....+..|.+.|| +|+.++- .+ .|..-. ......+.-+.+++.+.++++...+..
T Consensus 37 ~~~vv~~HG~~~~~~~~~~~~~~~~l~~~g~-~v~~~d~--~G---~G~s~~-~~~~~~~~~~~~d~~~~~~~l~~~~~~ 109 (270)
T 3llc_A 37 RPTCIWLGGYRSDMTGTKALEMDDLAASLGV-GAIRFDY--SG---HGASGG-AFRDGTISRWLEEALAVLDHFKPEKAI 109 (270)
T ss_dssp SCEEEEECCTTCCTTSHHHHHHHHHHHHHTC-EEEEECC--TT---STTCCS-CGGGCCHHHHHHHHHHHHHHHCCSEEE
T ss_pred CCeEEEECCCccccccchHHHHHHHHHhCCC-cEEEecc--cc---CCCCCC-ccccccHHHHHHHHHHHHHHhccCCeE
Confidence 56666665432 1 2346777888899 5776652 11 111100 011122333334566777778777788
Q ss_pred EEEEeeccccchh
Q 012218 429 FLGFGVSGRRRYN 441 (468)
Q Consensus 429 lLg~llG~~~~~~ 441 (468)
++|+=.|......
T Consensus 110 l~G~S~Gg~~a~~ 122 (270)
T 3llc_A 110 LVGSSMGGWIALR 122 (270)
T ss_dssp EEEETHHHHHHHH
T ss_pred EEEeChHHHHHHH
Confidence 8888777655433
No 122
>4ioe_A Secreted protein ESXB; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE; 1.44A {Bacillus anthracis} PDB: 4iog_A
Probab=25.87 E-value=19 Score=28.17 Aligned_cols=46 Identities=11% Similarity=0.194 Sum_probs=31.8
Q ss_pred hhhhhhhhHHHHHhHHhhhhhHhhhhhhhhHhHHHHHhhhhhhhcc
Q 012218 90 SSSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQ 135 (468)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (468)
...+....+.+++-+..+.+.+......|.+.-..+|...|...++
T Consensus 18 A~~~~~~~~~i~~~l~~L~~~~~~L~~~W~G~a~~af~~~~~~~~~ 63 (93)
T 4ioe_A 18 AGNFKNAAGEAQSQINRLEGDINSLEGQWAGATQAKFRGEFIQSKQ 63 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCchhhHHHHHHHHHHHH
Confidence 3445555666666677777777777778888777777777766653
No 123
>3gwk_C SAG1039, putative uncharacterized protein SAG1039; WXG motif, four-helical bundle, viral protein; 1.30A {Streptococcus agalactiae serogroup V} PDB: 3gvm_A 3o9o_A
Probab=25.19 E-value=13 Score=29.65 Aligned_cols=62 Identities=13% Similarity=0.178 Sum_probs=37.5
Q ss_pred hhhhhhhhHHHHHhHHhhhhhHhhhhhhhhHhHHHHHhhhhhhhcccCCCcCCCcccccchh
Q 012218 90 SSSMIKGENAVKSSLDTITSSLTSIKKSTSEAVDNVVSRVFSSIDQTGGSAGSKLTNFSTDL 151 (468)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 151 (468)
.+.+....+.+++-++.+.+.+......|.+.-..+|...|...++.-+.-...+.+.+..|
T Consensus 17 A~~~~~~~~~i~~~l~~L~~~~~~l~~~W~G~a~~aF~~~~~~~~~~~~~~~~~L~~i~~~L 78 (98)
T 3gwk_C 17 AQKYTAGSQQVTEVLNLLTQEQAVIDENWDGSTFDSFEAQFNELSPKITEFAQLLEDINQQL 78 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHBCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555666666777777777777777777777777777776644333333333333333
No 124
>2i4i_A ATP-dependent RNA helicase DDX3X; DEAD, structural genomics, SGC, structural GE consortium, hydrolase; HET: AMP; 2.20A {Homo sapiens}
Probab=25.01 E-value=59 Score=31.53 Aligned_cols=37 Identities=14% Similarity=0.117 Sum_probs=32.5
Q ss_pred CCCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchH
Q 012218 352 QDRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGF 389 (468)
Q Consensus 352 ~kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~ 389 (468)
.++.+++++|++-..+...+..|.+.|+ ++..+.|++
T Consensus 274 ~~~~~~lVf~~~~~~~~~l~~~L~~~~~-~~~~~h~~~ 310 (417)
T 2i4i_A 274 GKDSLTLVFVETKKGADSLEDFLYHEGY-ACTSIHGDR 310 (417)
T ss_dssp CTTCEEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTS
T ss_pred CCCCeEEEEECCHHHHHHHHHHHHHCCC-CeeEecCCC
Confidence 4577899999998888999999999998 688999986
No 125
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=23.61 E-value=62 Score=27.03 Aligned_cols=28 Identities=25% Similarity=0.272 Sum_probs=21.0
Q ss_pred CCCceEEEEeCCCchHHHHHHHHH----HccC
Q 012218 352 QDRSKVIVMDADGTRSKGIARSLR----KLGV 379 (468)
Q Consensus 352 ~kd~~IVVyC~sG~RS~~AA~~L~----~~Gf 379 (468)
.+..+|+++|..|+.+...+..++ +.|+
T Consensus 4 ~~~mkIlL~C~aGmSTsllv~km~~~a~~~gi 35 (108)
T 3nbm_A 4 SKELKVLVLCAGSGTSAQLANAINEGANLTEV 35 (108)
T ss_dssp -CCEEEEEEESSSSHHHHHHHHHHHHHHHHTC
T ss_pred ccCceEEEECCCCCCHHHHHHHHHHHHHHCCC
Confidence 456689999999998877777664 4565
No 126
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Probab=23.08 E-value=1.4e+02 Score=24.96 Aligned_cols=25 Identities=12% Similarity=0.029 Sum_probs=14.8
Q ss_pred HHHHHHHHhCCCCcEEEEcCChhhHh
Q 012218 274 PKSTLELLRGKENAVLIDVRHEDLRE 299 (468)
Q Consensus 274 p~el~elL~~~~~avLIDVRs~~Ey~ 299 (468)
.+++..+.+ ..=-.|||+|++.|..
T Consensus 18 ~~d~~~L~~-~gi~~Vi~l~~~~e~~ 42 (161)
T 2i6j_A 18 ENEILEWRK-EGVKRVLVLPEDWEIE 42 (161)
T ss_dssp HHHHHHHHH-HTCCEEEECSCHHHHH
T ss_pred HHHHHHHHH-CCCCEEEEcCchhhhh
Confidence 344444432 2235799999987654
No 127
>1to0_A Hypothetical UPF0247 protein YYDA; structural genomics, unknown function, PSI, protein structure initiative; 2.50A {Bacillus subtilis} SCOP: c.116.1.3
Probab=22.72 E-value=67 Score=29.15 Aligned_cols=43 Identities=23% Similarity=0.404 Sum_probs=32.4
Q ss_pred cccCCCceEEEEeCCCc--hHHHHHHHHHH---ccCCCEEEecchHHH
Q 012218 349 KIVQDRSKVIVMDADGT--RSKGIARSLRK---LGVMRAFLVQGGFQS 391 (468)
Q Consensus 349 k~l~kd~~IVVyC~sG~--RS~~AA~~L~~---~Gf~nV~vLdGG~~a 391 (468)
+.++++.-+|+.|..|. .|...|..|.+ .|..++..+-||-.+
T Consensus 65 ~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~G~~~i~FvIGGa~G 112 (167)
T 1to0_A 65 SKISPDAHVIALAIEGKMKTSEELADTIDKLATYGKSKVTFVIGGSLG 112 (167)
T ss_dssp TTSCTTSEEEEEEEEEEECCHHHHHHHHHHHHTTTCCEEEEEECCSSC
T ss_pred hhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCceEEEEEECCCC
Confidence 34455666888898886 78899988876 576789899998643
No 128
>2p6n_A ATP-dependent RNA helicase DDX41; DEAD, structural genomics, structural genomic consortium, SGC, hydrolase; 2.60A {Homo sapiens}
Probab=22.51 E-value=67 Score=28.69 Aligned_cols=35 Identities=23% Similarity=0.329 Sum_probs=30.5
Q ss_pred CceEEEEeCCCchHHHHHHHHHHccCCCEEEecchH
Q 012218 354 RSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGF 389 (468)
Q Consensus 354 d~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~ 389 (468)
..++||+|++-..+...+..|+..|+ ++..+.|++
T Consensus 54 ~~~~lVF~~~~~~~~~l~~~L~~~g~-~~~~lhg~~ 88 (191)
T 2p6n_A 54 PPPVLIFAEKKADVDAIHEYLLLKGV-EAVAIHGGK 88 (191)
T ss_dssp CSCEEEECSCHHHHHHHHHHHHHHTC-CEEEECTTS
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCC-cEEEEeCCC
Confidence 45799999998888999999999999 588899985
No 129
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4; 1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A* 3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Probab=22.48 E-value=1.7e+02 Score=29.21 Aligned_cols=28 Identities=14% Similarity=0.172 Sum_probs=18.5
Q ss_pred CCCceEEEEeCCCc-hHH-HHHHHHHHccC
Q 012218 352 QDRSKVIVMDADGT-RSK-GIARSLRKLGV 379 (468)
Q Consensus 352 ~kd~~IVVyC~sG~-RS~-~AA~~L~~~Gf 379 (468)
+++.+|+|+|..|. |+. .++..|...|.
T Consensus 117 ~~~~~v~vHC~~G~gRtg~~ia~~Li~~~~ 146 (339)
T 3v0d_A 117 DPDHVIAIHSKGGKGRTGTLVSSWLLEDGK 146 (339)
T ss_dssp CTTCEEEEECSSSSHHHHHHHHHHHHHTTS
T ss_pred CCCCeEEEEeCCCCcchHHHHHHHHHHhcC
Confidence 45679999999876 654 34455555543
No 130
>3ohg_A Uncharacterized protein from DUF2233 family; structural genomics, unknown function, joint center for STRU genomics, JCSG; HET: MSE; 1.80A {Bacteroides ovatus}
Probab=22.47 E-value=76 Score=31.11 Aligned_cols=26 Identities=23% Similarity=0.377 Sum_probs=22.7
Q ss_pred CchHHHHHHHHHHccCCCEEEecchH
Q 012218 364 GTRSKGIARSLRKLGVMRAFLVQGGF 389 (468)
Q Consensus 364 G~RS~~AA~~L~~~Gf~nV~vLdGG~ 389 (468)
|..-...++.|+++|..++.+|+||-
T Consensus 218 G~tl~ela~~~~~lG~~~AlnLDGGg 243 (285)
T 3ohg_A 218 GLTLPHLATMMKAVGCYNAINLDGGG 243 (285)
T ss_dssp CBCHHHHHHHHHHHTCSEEEECCCGG
T ss_pred CCCHHHHHHHHHHcCCCeEEECCCCc
Confidence 45568899999999999999999984
No 131
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=21.81 E-value=61 Score=30.39 Aligned_cols=33 Identities=15% Similarity=0.232 Sum_probs=25.6
Q ss_pred CceEEEEeCCCchHHHHHHHHHHccCCCEEEec
Q 012218 354 RSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQ 386 (468)
Q Consensus 354 d~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLd 386 (468)
+-.++++|-....+...+..|.+.|.+.+.+..
T Consensus 148 ~Id~vIIAvPs~~aq~v~d~lv~~GIk~I~nFa 180 (212)
T 3keo_A 148 DIETAILTVPSTEAQEVADILVKAGIKGILSFS 180 (212)
T ss_dssp SCCEEEECSCGGGHHHHHHHHHHHTCCEEEECS
T ss_pred CCCEEEEecCchhHHHHHHHHHHcCCCEEEEcC
Confidence 446788886556678899999999998777664
No 132
>1u2p_A Ptpase, low molecular weight protein-tyrosine- phosphatase; hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 1u2q_A
Probab=21.61 E-value=51 Score=29.11 Aligned_cols=38 Identities=16% Similarity=0.239 Sum_probs=27.7
Q ss_pred ceEEEEeCCCc-hHHHHHHHHHHc----cCC-CEEEecchHHHH
Q 012218 355 SKVIVMDADGT-RSKGIARSLRKL----GVM-RAFLVQGGFQSW 392 (468)
Q Consensus 355 ~~IVVyC~sG~-RS~~AA~~L~~~----Gf~-nV~vLdGG~~aW 392 (468)
.+|+|+|.+.. ||..|-..|+.+ |.. ++.+...|..+|
T Consensus 5 ~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~ 48 (163)
T 1u2p_A 5 LHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNW 48 (163)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCTTTEEEEEEESSCT
T ss_pred CEEEEEcCCcHhHHHHHHHHHHHHHHHCCCCCcEEEEecccCCC
Confidence 57999998755 988877776554 543 577777787776
No 133
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=20.94 E-value=2.4e+02 Score=24.13 Aligned_cols=82 Identities=9% Similarity=0.069 Sum_probs=42.8
Q ss_pred CCceEEEEeCCCc----hHHHHHHHHHHccCCCEEEecchHHHHHHcCCCccccccccchhhchhhHHHHHHHhcCCCcE
Q 012218 353 DRSKVIVMDADGT----RSKGIARSLRKLGVMRAFLVQGGFQSWVKEGLRIKELKSETALTILNEDAEAILEDINSSPVQ 428 (468)
Q Consensus 353 kd~~IVVyC~sG~----RS~~AA~~L~~~Gf~nV~vLdGG~~aW~~aGLPv~~~~~~~~l~i~~~~~e~~lq~ir~~~~~ 428 (468)
++.+.||++.+.. .-...+..|.+.|| +|+.++- .++.....+.. .......-+.+++.++++++...+..
T Consensus 24 ~~~~~vv~~hG~~~~~~~~~~~~~~l~~~G~-~v~~~d~--~G~G~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (286)
T 3qit_A 24 PEHPVVLCIHGILEQGLAWQEVALPLAAQGY-RVVAPDL--FGHGRSSHLEM--VTSYSSLTFLAQIDRVIQELPDQPLL 98 (286)
T ss_dssp TTSCEEEEECCTTCCGGGGHHHHHHHHHTTC-EEEEECC--TTSTTSCCCSS--GGGCSHHHHHHHHHHHHHHSCSSCEE
T ss_pred CCCCEEEEECCCCcccchHHHHHHHhhhcCe-EEEEECC--CCCCCCCCCCC--CCCcCHHHHHHHHHHHHHhcCCCCEE
Confidence 3445666665432 12346677888899 5776652 11111111110 01122222334556677777767788
Q ss_pred EEEEeeccccc
Q 012218 429 FLGFGVSGRRR 439 (468)
Q Consensus 429 lLg~llG~~~~ 439 (468)
++|+=.|....
T Consensus 99 l~G~S~Gg~~a 109 (286)
T 3qit_A 99 LVGHSMGAMLA 109 (286)
T ss_dssp EEEETHHHHHH
T ss_pred EEEeCHHHHHH
Confidence 88888776443
No 134
>2v1x_A ATP-dependent DNA helicase Q1; DNA strand annealing, mismatch repair, nucleotide-binding, DNA-binding, polymorphism, nuclear protein, ATPase; HET: ADP; 2.00A {Homo sapiens} PDB: 2wwy_A*
Probab=20.64 E-value=76 Score=33.79 Aligned_cols=36 Identities=19% Similarity=0.216 Sum_probs=32.6
Q ss_pred CCceEEEEeCCCchHHHHHHHHHHccCCCEEEecchH
Q 012218 353 DRSKVIVMDADGTRSKGIARSLRKLGVMRAFLVQGGF 389 (468)
Q Consensus 353 kd~~IVVyC~sG~RS~~AA~~L~~~Gf~nV~vLdGG~ 389 (468)
++.++||||.+-..+...+..|...|+ ++..+.||+
T Consensus 266 ~~~~~IVf~~sr~~~e~la~~L~~~g~-~~~~~h~~l 301 (591)
T 2v1x_A 266 KGQSGIIYCFSQKDSEQVTVSLQNLGI-HAGAYHANL 301 (591)
T ss_dssp TTCEEEEECSSHHHHHHHHHHHHHTTC-CEEEECTTS
T ss_pred cCCCeEEEeCcHHHHHHHHHHHHHCCC-CEEEecCCC
Confidence 567899999998889999999999998 689999997
No 135
>3rof_A Low molecular weight protein-tyrosine-phosphatase; phosphatase, hydrolase; 1.03A {Staphylococcus aureus}
Probab=20.58 E-value=57 Score=29.02 Aligned_cols=38 Identities=18% Similarity=0.197 Sum_probs=27.7
Q ss_pred ceEEEEeCCCc-hHHHHHHHHHHc----cCCCEEEecchHHHH
Q 012218 355 SKVIVMDADGT-RSKGIARSLRKL----GVMRAFLVQGGFQSW 392 (468)
Q Consensus 355 ~~IVVyC~sG~-RS~~AA~~L~~~----Gf~nV~vLdGG~~aW 392 (468)
.+|+|+|.+.. ||..|...|+.+ |..++.+...|...|
T Consensus 7 ~~vLFVC~gN~cRSpmAE~i~~~~~~~~gl~~~~v~SAGt~~~ 49 (158)
T 3rof_A 7 VDVAFVCLGNICRSPMAEAIMRQRLKDRNIHDIKVHSRGTGSW 49 (158)
T ss_dssp EEEEEEESSSSSHHHHHHHHHHHHHHHTTCCSEEEEEEETTCC
T ss_pred CEEEEEeCCchhHHHHHHHHHHHHHHHcCCCCeEEEecccCCc
Confidence 47999998765 888877766543 655577777787776
No 136
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=20.45 E-value=42 Score=29.67 Aligned_cols=40 Identities=25% Similarity=0.328 Sum_probs=28.9
Q ss_pred CCceEEEEeCCCc-hHHHHHHHHHHc----cC-CCEEEecchHHHH
Q 012218 353 DRSKVIVMDADGT-RSKGIARSLRKL----GV-MRAFLVQGGFQSW 392 (468)
Q Consensus 353 kd~~IVVyC~sG~-RS~~AA~~L~~~----Gf-~nV~vLdGG~~aW 392 (468)
+..+|+|+|.+.. ||..+-..|+.+ |. .++.+...|...|
T Consensus 3 ~~~~VLFVC~gN~cRSpmAEal~~~~~~~~gl~~~~~v~SAGt~~~ 48 (161)
T 2cwd_A 3 RPVRVLFVCLGNICRSPMAEGIFRKLLKERGLEDRFEVDSAGTGAW 48 (161)
T ss_dssp CCEEEEEEESSSSSHHHHHHHHHHHHHHHHTCTTTEEEEEEESSCT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHHHHHHcCCCCcEEEEecccCCC
Confidence 3457999998765 988877776554 55 3677778788776
Done!