Query 012219
Match_columns 468
No_of_seqs 467 out of 4053
Neff 9.8
Searched_HMMs 46136
Date Fri Mar 29 00:19:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/012219.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/012219hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 4E-56 8.6E-61 489.9 35.1 419 2-445 497-954 (968)
2 KOG1187 Serine/threonine prote 100.0 1.9E-56 4.2E-61 431.4 25.4 282 156-443 61-353 (361)
3 KOG0192 Tyrosine kinase specif 100.0 1.1E-50 2.5E-55 388.4 24.3 259 171-444 42-305 (362)
4 KOG0197 Tyrosine kinases [Sign 100.0 1.1E-50 2.4E-55 387.0 16.4 255 170-443 206-462 (468)
5 KOG0575 Polo-like serine/threo 100.0 4.7E-49 1E-53 379.6 22.1 264 170-451 18-283 (592)
6 KOG0581 Mitogen-activated prot 100.0 8.7E-49 1.9E-53 357.8 19.8 253 172-439 81-336 (364)
7 KOG0595 Serine/threonine-prote 100.0 9.3E-48 2E-52 353.9 20.8 203 169-379 9-218 (429)
8 KOG0615 Serine/threonine prote 100.0 9.7E-49 2.1E-53 359.9 13.7 260 169-442 171-442 (475)
9 KOG0591 NIMA (never in mitosis 100.0 3.8E-49 8.3E-54 345.6 7.7 260 170-440 19-283 (375)
10 KOG0598 Ribosomal protein S6 k 100.0 1.6E-46 3.4E-51 342.9 17.3 251 169-436 24-279 (357)
11 KOG1026 Nerve growth factor re 100.0 1.7E-46 3.6E-51 375.4 17.1 261 169-445 485-765 (774)
12 KOG0593 Predicted protein kina 100.0 9.1E-47 2E-51 333.9 13.4 261 170-437 2-283 (396)
13 KOG0196 Tyrosine kinase, EPH ( 100.0 1.3E-46 2.9E-51 369.3 11.1 273 156-446 606-895 (996)
14 KOG0582 Ste20-like serine/thre 100.0 8.1E-45 1.8E-49 337.2 22.3 267 169-443 25-299 (516)
15 KOG0592 3-phosphoinositide-dep 100.0 6.4E-45 1.4E-49 345.5 17.9 256 167-440 70-340 (604)
16 KOG0193 Serine/threonine prote 100.0 2.8E-45 6.1E-50 352.0 15.4 269 159-444 381-655 (678)
17 KOG0194 Protein tyrosine kinas 100.0 5.2E-45 1.1E-49 353.7 14.6 273 161-448 148-426 (474)
18 KOG0198 MEKK and related serin 100.0 2.2E-44 4.9E-49 334.6 17.4 258 170-445 17-283 (313)
19 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.4E-43 3E-48 345.1 21.6 260 169-443 6-335 (338)
20 KOG0578 p21-activated serine/t 100.0 5.4E-44 1.2E-48 342.0 15.7 251 170-439 273-524 (550)
21 KOG0659 Cdk activating kinase 100.0 1.5E-43 3.2E-48 308.4 17.0 276 170-458 2-300 (318)
22 KOG0600 Cdc2-related protein k 100.0 1.8E-43 4E-48 332.9 18.7 265 169-440 116-403 (560)
23 KOG1095 Protein tyrosine kinas 100.0 1.3E-43 2.7E-48 367.2 18.8 264 170-449 692-968 (1025)
24 PHA02988 hypothetical protein; 100.0 9.7E-43 2.1E-47 330.2 23.3 248 176-442 26-279 (283)
25 KOG4721 Serine/threonine prote 100.0 2E-44 4.3E-49 342.6 10.4 251 158-443 119-369 (904)
26 KOG0583 Serine/threonine prote 100.0 7.6E-43 1.7E-47 337.6 21.5 258 168-442 15-280 (370)
27 KOG0661 MAPK related serine/th 100.0 3.2E-44 6.9E-49 335.7 10.8 266 169-443 9-296 (538)
28 KOG0597 Serine-threonine prote 100.0 6.5E-44 1.4E-48 339.1 13.1 249 170-438 2-251 (808)
29 cd05631 STKc_GRK4 Catalytic do 100.0 2.4E-42 5.2E-47 328.2 23.7 254 172-438 2-261 (285)
30 KOG1094 Discoidin domain recep 100.0 2.1E-43 4.5E-48 336.8 16.0 264 169-442 537-804 (807)
31 KOG0616 cAMP-dependent protein 100.0 8.2E-43 1.8E-47 308.1 18.1 239 170-429 44-283 (355)
32 cd05096 PTKc_DDR1 Catalytic do 100.0 2.8E-42 6.2E-47 330.9 23.1 259 170-440 5-303 (304)
33 cd05571 STKc_PKB Catalytic dom 100.0 1.1E-42 2.3E-47 336.5 19.5 245 176-438 1-251 (323)
34 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.8E-42 4E-47 336.4 20.2 255 170-438 1-257 (333)
35 cd05104 PTKc_Kit Catalytic dom 100.0 4.3E-42 9.4E-47 338.5 22.0 258 169-441 34-373 (375)
36 cd05612 STKc_PRKX_like Catalyt 100.0 1.3E-42 2.8E-47 331.0 17.7 248 170-438 1-254 (291)
37 KOG0201 Serine/threonine prote 100.0 1.1E-43 2.4E-48 329.4 9.5 251 170-439 13-264 (467)
38 KOG0580 Serine/threonine prote 100.0 6.5E-43 1.4E-47 300.0 13.3 253 169-439 21-274 (281)
39 cd05106 PTKc_CSF-1R Catalytic 100.0 6.5E-42 1.4E-46 337.0 21.9 259 169-442 37-372 (374)
40 cd05585 STKc_YPK1_like Catalyt 100.0 3.2E-42 6.9E-47 331.6 19.0 242 178-437 1-246 (312)
41 PTZ00263 protein kinase A cata 100.0 3.6E-42 7.8E-47 333.5 19.1 248 170-438 18-271 (329)
42 cd05595 STKc_PKB_beta Catalyti 100.0 5.7E-42 1.2E-46 331.3 20.3 245 176-438 1-251 (323)
43 cd05593 STKc_PKB_gamma Catalyt 100.0 7.8E-42 1.7E-46 330.9 20.5 245 176-438 1-251 (328)
44 cd06649 PKc_MEK2 Catalytic dom 100.0 3.4E-41 7.5E-46 327.0 24.2 199 170-377 5-204 (331)
45 PTZ00426 cAMP-dependent protei 100.0 6.1E-42 1.3E-46 332.8 18.7 248 170-438 30-284 (340)
46 KOG0611 Predicted serine/threo 100.0 2.1E-42 4.7E-47 316.8 14.5 251 169-439 52-304 (668)
47 cd05064 PTKc_EphR_A10 Catalyti 100.0 3.2E-41 7E-46 317.2 22.0 254 170-441 5-264 (266)
48 cd05608 STKc_GRK1 Catalytic do 100.0 5.3E-41 1.2E-45 318.1 23.0 250 178-438 1-257 (280)
49 PF07714 Pkinase_Tyr: Protein 100.0 5.6E-42 1.2E-46 320.9 16.1 249 174-439 3-259 (259)
50 KOG1989 ARK protein kinase fam 100.0 1.9E-41 4.1E-46 340.8 20.9 266 169-453 36-322 (738)
51 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2.3E-41 5E-46 324.4 20.5 261 169-437 4-287 (303)
52 cd05628 STKc_NDR1 Catalytic do 100.0 6.1E-41 1.3E-45 329.4 23.8 204 170-379 1-240 (363)
53 cd05588 STKc_aPKC Catalytic do 100.0 2E-41 4.4E-46 328.3 19.6 250 176-438 1-262 (329)
54 cd08228 STKc_Nek6 Catalytic do 100.0 7.9E-41 1.7E-45 314.6 22.9 262 170-442 2-265 (267)
55 cd05618 STKc_aPKC_iota Catalyt 100.0 1.9E-41 4.2E-46 328.3 19.2 250 176-438 1-262 (329)
56 cd05594 STKc_PKB_alpha Catalyt 100.0 1.2E-41 2.5E-46 329.6 17.6 246 176-438 1-252 (325)
57 KOG0589 Serine/threonine prote 100.0 4.4E-42 9.5E-47 327.1 14.1 253 170-438 4-258 (426)
58 KOG0588 Serine/threonine prote 100.0 9.9E-42 2.1E-46 330.4 16.7 253 170-441 12-266 (786)
59 cd05048 PTKc_Ror Catalytic Dom 100.0 5.9E-41 1.3E-45 318.3 21.9 256 170-441 5-282 (283)
60 PLN00034 mitogen-activated pro 100.0 4.2E-41 9.1E-46 329.4 21.4 250 170-439 74-329 (353)
61 cd07871 STKc_PCTAIRE3 Catalyti 100.0 4E-41 8.6E-46 320.3 20.7 261 170-438 5-285 (288)
62 cd05114 PTKc_Tec_Rlk Catalytic 100.0 6.6E-41 1.4E-45 313.2 21.8 250 170-439 4-255 (256)
63 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.4E-41 2.9E-46 332.8 17.6 254 170-438 1-285 (350)
64 cd05584 STKc_p70S6K Catalytic 100.0 3.6E-41 7.8E-46 325.8 20.3 245 176-438 2-256 (323)
65 cd05108 PTKc_EGFR Catalytic do 100.0 7.1E-41 1.5E-45 322.9 22.3 257 170-445 7-271 (316)
66 cd05589 STKc_PKN Catalytic dom 100.0 3.8E-41 8.3E-46 325.8 20.4 248 172-438 1-257 (324)
67 cd05072 PTKc_Lyn Catalytic dom 100.0 7.5E-41 1.6E-45 313.8 21.7 254 169-441 5-260 (261)
68 cd05587 STKc_cPKC Catalytic do 100.0 4.6E-41 1E-45 325.3 20.8 249 171-437 1-256 (324)
69 cd08229 STKc_Nek7 Catalytic do 100.0 1.1E-40 2.5E-45 313.6 22.6 262 170-442 2-265 (267)
70 KOG2345 Serine/threonine prote 100.0 8.7E-42 1.9E-46 294.4 13.7 261 169-441 20-299 (302)
71 KOG3653 Transforming growth fa 100.0 5E-41 1.1E-45 314.1 19.8 263 170-445 210-506 (534)
72 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.4E-40 5.3E-45 311.2 24.8 263 170-443 2-266 (267)
73 cd05148 PTKc_Srm_Brk Catalytic 100.0 3.2E-41 7E-46 316.2 18.8 256 168-441 4-260 (261)
74 cd05590 STKc_nPKC_eta Catalyti 100.0 3.1E-41 6.7E-46 325.7 19.1 239 176-432 1-241 (320)
75 cd05605 STKc_GRK4_like Catalyt 100.0 1.1E-40 2.5E-45 316.7 22.5 255 171-438 1-261 (285)
76 cd05616 STKc_cPKC_beta Catalyt 100.0 6.3E-41 1.4E-45 324.2 21.0 249 171-437 1-256 (323)
77 cd05626 STKc_LATS2 Catalytic d 100.0 8.8E-41 1.9E-45 330.4 22.4 254 171-438 2-305 (381)
78 cd07859 STKc_TDY_MAPK_plant Ca 100.0 4E-41 8.6E-46 327.9 19.2 260 171-438 1-290 (338)
79 KOG0605 NDR and related serine 100.0 5.1E-41 1.1E-45 319.2 19.2 255 168-437 139-444 (550)
80 cd05068 PTKc_Frk_like Catalyti 100.0 1.3E-40 2.9E-45 312.1 22.0 254 169-441 5-260 (261)
81 cd05599 STKc_NDR_like Catalyti 100.0 4.7E-41 1E-45 330.7 19.8 254 170-438 1-296 (364)
82 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.6E-40 3.4E-45 328.6 23.5 260 169-443 36-398 (400)
83 cd05591 STKc_nPKC_epsilon Cata 100.0 4.3E-41 9.2E-46 325.1 19.0 245 176-438 1-254 (321)
84 KOG0663 Protein kinase PITSLRE 100.0 3.3E-41 7.2E-46 302.4 16.7 266 169-443 75-367 (419)
85 cd07848 STKc_CDKL5 Catalytic d 100.0 6E-41 1.3E-45 319.0 19.5 262 170-438 1-284 (287)
86 cd05049 PTKc_Trk Catalytic dom 100.0 1.2E-40 2.6E-45 315.7 21.4 255 170-440 5-279 (280)
87 cd06650 PKc_MEK1 Catalytic dom 100.0 2.3E-40 5E-45 321.3 23.9 199 170-377 5-204 (333)
88 cd07862 STKc_CDK6 Catalytic do 100.0 9E-41 2E-45 318.2 20.5 261 170-437 1-286 (290)
89 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.3E-40 2.8E-45 311.3 21.1 250 170-439 4-255 (256)
90 cd05062 PTKc_IGF-1R Catalytic 100.0 1.2E-40 2.6E-45 315.3 20.9 257 168-440 4-276 (277)
91 cd05592 STKc_nPKC_theta_delta 100.0 1.1E-40 2.3E-45 321.4 20.6 244 176-437 1-247 (316)
92 cd05033 PTKc_EphR Catalytic do 100.0 3.5E-40 7.5E-45 310.2 23.6 256 169-442 3-265 (266)
93 cd05570 STKc_PKC Catalytic dom 100.0 8E-41 1.7E-45 322.6 19.7 245 176-438 1-252 (318)
94 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.3E-40 2.7E-45 322.5 21.1 250 176-438 1-260 (327)
95 KOG4278 Protein tyrosine kinas 100.0 8.6E-42 1.9E-46 327.4 12.6 260 163-443 260-524 (1157)
96 cd05620 STKc_nPKC_delta Cataly 100.0 1E-40 2.2E-45 321.6 19.8 243 176-436 1-246 (316)
97 cd05596 STKc_ROCK Catalytic do 100.0 1.3E-40 2.8E-45 327.4 20.8 256 168-438 41-304 (370)
98 cd05052 PTKc_Abl Catalytic dom 100.0 2.4E-40 5.1E-45 310.8 21.6 254 170-442 6-262 (263)
99 cd05607 STKc_GRK7 Catalytic do 100.0 2.5E-40 5.5E-45 312.9 22.0 250 178-439 1-251 (277)
100 cd05619 STKc_nPKC_theta Cataly 100.0 2E-40 4.3E-45 319.4 21.4 244 176-437 1-247 (316)
101 cd06646 STKc_MAP4K5 Catalytic 100.0 3.4E-40 7.5E-45 310.3 22.5 254 170-439 9-266 (267)
102 PTZ00267 NIMA-related protein 100.0 3.1E-40 6.7E-45 335.0 23.6 250 171-437 68-322 (478)
103 cd05575 STKc_SGK Catalytic dom 100.0 9E-41 2E-45 323.1 18.8 240 176-433 1-242 (323)
104 KOG2052 Activin A type IB rece 100.0 6.6E-40 1.4E-44 304.4 23.5 263 169-444 210-505 (513)
105 cd08529 STKc_FA2-like Catalyti 100.0 3.1E-40 6.6E-45 308.5 21.7 252 171-438 1-253 (256)
106 cd05614 STKc_MSK2_N N-terminal 100.0 1.8E-40 4E-45 322.3 20.8 254 171-438 1-267 (332)
107 cd05625 STKc_LATS1 Catalytic d 100.0 1.7E-40 3.7E-45 328.6 20.7 253 171-438 2-305 (382)
108 cd05094 PTKc_TrkC Catalytic do 100.0 4.6E-40 1E-44 313.5 22.9 259 170-445 5-285 (291)
109 cd05629 STKc_NDR_like_fungal C 100.0 1.5E-40 3.3E-45 328.4 20.0 254 170-438 1-305 (377)
110 cd05054 PTKc_VEGFR Catalytic d 100.0 2.2E-40 4.9E-45 321.7 20.8 260 169-443 6-334 (337)
111 cd05093 PTKc_TrkB Catalytic do 100.0 4.2E-40 9.1E-45 313.3 22.3 259 170-445 5-282 (288)
112 cd05059 PTKc_Tec_like Catalyti 100.0 3.4E-40 7.4E-45 308.4 21.2 250 170-439 4-255 (256)
113 KOG0594 Protein kinase PCTAIRE 100.0 1.4E-40 3E-45 303.9 17.8 264 170-438 11-302 (323)
114 cd05598 STKc_LATS Catalytic do 100.0 1.1E-40 2.4E-45 329.4 18.7 253 171-438 2-301 (376)
115 cd05090 PTKc_Ror1 Catalytic do 100.0 4.1E-40 9E-45 312.6 21.9 256 170-441 5-282 (283)
116 PHA03212 serine/threonine kina 100.0 4.8E-40 1E-44 324.8 23.2 255 170-441 92-380 (391)
117 cd05601 STKc_CRIK Catalytic do 100.0 8.2E-41 1.8E-45 324.5 17.4 255 170-438 1-263 (330)
118 KOG0585 Ca2+/calmodulin-depend 100.0 6.4E-41 1.4E-45 313.3 15.7 256 169-440 96-374 (576)
119 cd05111 PTK_HER3 Pseudokinase 100.0 5.8E-40 1.3E-44 310.9 22.3 258 170-446 7-272 (279)
120 PTZ00283 serine/threonine prot 100.0 2.9E-40 6.3E-45 335.4 21.6 256 168-438 30-297 (496)
121 cd05615 STKc_cPKC_alpha Cataly 100.0 3.6E-40 7.8E-45 318.7 21.2 244 171-432 1-246 (323)
122 PRK13184 pknD serine/threonine 100.0 5E-40 1.1E-44 342.9 23.7 263 170-444 2-292 (932)
123 cd05067 PTKc_Lck_Blk Catalytic 100.0 6.8E-40 1.5E-44 307.1 22.3 253 169-441 5-259 (260)
124 cd05084 PTKc_Fes Catalytic dom 100.0 5.9E-40 1.3E-44 306.0 21.5 247 176-440 1-251 (252)
125 cd05045 PTKc_RET Catalytic dom 100.0 6.2E-40 1.4E-44 312.5 22.0 258 171-444 1-288 (290)
126 cd05582 STKc_RSK_N N-terminal 100.0 7.4E-41 1.6E-45 323.0 15.8 240 176-434 2-245 (318)
127 cd05621 STKc_ROCK2 Catalytic d 100.0 2.8E-40 6E-45 324.7 20.0 256 168-438 41-304 (370)
128 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.1E-39 2.3E-44 309.7 23.4 259 172-442 6-281 (283)
129 cd05604 STKc_SGK3 Catalytic do 100.0 1.5E-40 3.2E-45 321.9 17.7 241 176-434 1-243 (325)
130 cd05089 PTKc_Tie1 Catalytic do 100.0 5.4E-40 1.2E-44 314.0 21.0 260 170-446 2-279 (297)
131 KOG0694 Serine/threonine prote 100.0 2.2E-40 4.7E-45 323.4 18.4 246 168-432 366-613 (694)
132 cd05602 STKc_SGK1 Catalytic do 100.0 2.5E-40 5.3E-45 320.3 18.7 242 176-435 1-244 (325)
133 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 8.5E-40 1.9E-44 306.4 21.7 252 170-441 6-259 (260)
134 cd05116 PTKc_Syk Catalytic dom 100.0 8E-40 1.7E-44 306.1 21.4 246 177-441 2-254 (257)
135 cd05603 STKc_SGK2 Catalytic do 100.0 3E-40 6.6E-45 319.2 19.0 240 176-433 1-242 (321)
136 cd05097 PTKc_DDR_like Catalyti 100.0 9.4E-40 2E-44 312.0 22.1 259 170-440 5-294 (295)
137 cd05053 PTKc_FGFR Catalytic do 100.0 6.6E-40 1.4E-44 312.8 20.9 258 169-442 11-291 (293)
138 cd05071 PTKc_Src Catalytic dom 100.0 1.1E-39 2.5E-44 306.0 22.0 253 169-441 5-259 (262)
139 cd05627 STKc_NDR2 Catalytic do 100.0 4.7E-40 1E-44 322.9 20.1 254 170-438 1-293 (360)
140 KOG0660 Mitogen-activated prot 100.0 1E-40 2.2E-45 303.7 14.0 274 169-450 21-323 (359)
141 cd05107 PTKc_PDGFR_beta Cataly 100.0 8.2E-40 1.8E-44 323.2 21.8 261 167-442 34-399 (401)
142 cd06619 PKc_MKK5 Catalytic dom 100.0 1.3E-39 2.8E-44 308.5 22.2 249 171-439 2-254 (279)
143 cd05109 PTKc_HER2 Catalytic do 100.0 1.2E-39 2.7E-44 308.7 22.0 259 169-446 6-272 (279)
144 cd05075 PTKc_Axl Catalytic dom 100.0 1.8E-39 3.9E-44 306.3 23.0 255 172-441 1-270 (272)
145 cd05632 STKc_GRK5 Catalytic do 100.0 2.4E-39 5.1E-44 307.6 23.9 254 172-438 2-261 (285)
146 cd06625 STKc_MEKK3_like Cataly 100.0 2.5E-39 5.4E-44 303.7 23.7 253 170-438 2-260 (263)
147 cd08219 STKc_Nek3 Catalytic do 100.0 1.3E-39 2.7E-44 304.4 21.4 251 171-438 1-252 (255)
148 cd05043 PTK_Ryk Pseudokinase d 100.0 1.2E-39 2.7E-44 308.8 21.6 260 169-444 5-278 (280)
149 cd05085 PTKc_Fer Catalytic dom 100.0 2.2E-39 4.7E-44 301.8 22.7 246 177-440 2-249 (250)
150 cd06654 STKc_PAK1 Catalytic do 100.0 1.8E-39 3.8E-44 310.2 22.4 250 170-438 20-270 (296)
151 cd05115 PTKc_Zap-70 Catalytic 100.0 2.7E-39 5.8E-44 302.6 23.0 247 177-442 2-255 (257)
152 cd05630 STKc_GRK6 Catalytic do 100.0 1.6E-39 3.5E-44 308.7 21.8 253 172-437 2-260 (285)
153 cd05095 PTKc_DDR2 Catalytic do 100.0 2.2E-39 4.8E-44 309.6 22.8 262 170-440 5-295 (296)
154 cd05622 STKc_ROCK1 Catalytic d 100.0 8.9E-40 1.9E-44 321.4 20.6 262 163-439 36-305 (371)
155 cd05051 PTKc_DDR Catalytic dom 100.0 2.4E-39 5.1E-44 309.4 23.0 263 169-440 4-295 (296)
156 cd05091 PTKc_Ror2 Catalytic do 100.0 9.4E-40 2E-44 310.1 20.1 256 170-441 5-282 (283)
157 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.5E-39 3.3E-44 307.7 21.4 256 169-440 5-276 (277)
158 cd05035 PTKc_Axl_like Catalyti 100.0 2.9E-39 6.3E-44 304.9 23.2 256 172-442 1-272 (273)
159 cd05061 PTKc_InsR Catalytic do 100.0 1.5E-39 3.1E-44 309.6 21.3 260 168-443 4-279 (288)
160 cd05092 PTKc_TrkA Catalytic do 100.0 1.8E-39 3.9E-44 307.7 21.8 254 170-440 5-279 (280)
161 cd05055 PTKc_PDGFR Catalytic d 100.0 2.7E-39 5.8E-44 309.8 23.2 258 169-442 34-301 (302)
162 cd07861 STKc_CDK1_euk Catalyti 100.0 1.8E-39 3.9E-44 308.4 21.8 263 171-438 1-282 (285)
163 KOG0032 Ca2+/calmodulin-depend 100.0 1.9E-39 4.1E-44 313.7 21.9 254 169-438 34-293 (382)
164 cd05039 PTKc_Csk_like Catalyti 100.0 3.8E-39 8.3E-44 301.3 23.4 250 169-441 5-255 (256)
165 cd06637 STKc_TNIK Catalytic do 100.0 1.4E-39 3E-44 307.1 20.5 253 168-438 4-269 (272)
166 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.7E-39 3.7E-44 312.1 21.3 259 169-443 17-300 (307)
167 cd06612 STKc_MST1_2 Catalytic 100.0 2E-39 4.4E-44 303.0 21.2 250 170-438 3-253 (256)
168 cd05069 PTKc_Yes Catalytic dom 100.0 3.3E-39 7.1E-44 302.5 22.6 252 170-441 6-259 (260)
169 KOG0033 Ca2+/calmodulin-depend 100.0 8.2E-42 1.8E-46 293.9 4.4 275 169-459 10-289 (355)
170 cd05597 STKc_DMPK_like Catalyt 100.0 2.4E-39 5.1E-44 314.1 22.1 257 170-438 1-266 (331)
171 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 3.9E-39 8.4E-44 306.0 23.0 262 170-442 4-283 (284)
172 cd05032 PTKc_InsR_like Catalyt 100.0 2.4E-39 5.3E-44 306.2 21.4 256 169-440 5-276 (277)
173 PF00069 Pkinase: Protein kina 100.0 7.5E-40 1.6E-44 306.6 17.6 255 172-438 1-257 (260)
174 cd06624 STKc_ASK Catalytic dom 100.0 4.7E-39 1E-43 302.8 23.1 258 166-438 4-265 (268)
175 cd05066 PTKc_EphR_A Catalytic 100.0 4.2E-39 9.1E-44 303.0 22.8 255 170-442 4-266 (267)
176 cd05060 PTKc_Syk_like Catalyti 100.0 5.7E-39 1.2E-43 300.3 23.5 247 176-442 1-255 (257)
177 cd05082 PTKc_Csk Catalytic dom 100.0 4.2E-39 9.1E-44 301.1 22.5 248 170-441 6-255 (256)
178 cd05034 PTKc_Src_like Catalyti 100.0 3.6E-39 7.7E-44 302.4 22.1 254 169-441 5-260 (261)
179 cd05088 PTKc_Tie2 Catalytic do 100.0 2.1E-39 4.6E-44 310.7 20.9 259 170-445 7-283 (303)
180 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.3E-39 5E-44 311.4 21.2 260 170-437 6-285 (309)
181 cd06645 STKc_MAP4K3 Catalytic 100.0 3.1E-39 6.6E-44 303.9 21.6 253 170-438 9-265 (267)
182 cd05101 PTKc_FGFR2 Catalytic d 100.0 4.2E-39 9.2E-44 308.9 22.6 259 169-443 14-297 (304)
183 cd05040 PTKc_Ack_like Catalyti 100.0 4E-39 8.6E-44 301.3 21.8 248 176-440 1-256 (257)
184 cd05063 PTKc_EphR_A2 Catalytic 100.0 5E-39 1.1E-43 302.6 22.5 255 170-442 5-267 (268)
185 cd05103 PTKc_VEGFR2 Catalytic 100.0 3.2E-39 7E-44 314.7 21.9 260 169-443 6-340 (343)
186 cd05586 STKc_Sck1_like Catalyt 100.0 4.7E-40 1E-44 319.1 15.6 243 178-437 1-252 (330)
187 cd05050 PTKc_Musk Catalytic do 100.0 3.7E-39 8.1E-44 306.8 21.5 257 169-441 4-288 (288)
188 cd06655 STKc_PAK2 Catalytic do 100.0 6.8E-39 1.5E-43 306.1 23.2 256 170-444 19-276 (296)
189 cd00192 PTKc Catalytic domain 100.0 6.2E-39 1.3E-43 300.4 22.5 249 176-440 1-262 (262)
190 cd07876 STKc_JNK2 Catalytic do 100.0 2.8E-39 6E-44 317.4 21.0 200 168-378 19-225 (359)
191 cd06609 STKc_MST3_like Catalyt 100.0 4.6E-39 1E-43 303.9 21.7 249 171-438 2-251 (274)
192 cd06613 STKc_MAP4K3_like Catal 100.0 5.8E-39 1.3E-43 301.0 22.1 253 170-437 3-259 (262)
193 cd06631 STKc_YSK4 Catalytic do 100.0 8.9E-39 1.9E-43 300.4 23.3 252 171-437 1-261 (265)
194 cd07847 STKc_CDKL1_4 Catalytic 100.0 4.5E-39 9.8E-44 305.8 21.5 262 170-438 1-283 (286)
195 cd08221 STKc_Nek9 Catalytic do 100.0 8.6E-39 1.9E-43 298.9 22.9 253 171-439 1-254 (256)
196 cd06643 STKc_SLK Catalytic dom 100.0 7.3E-39 1.6E-43 303.9 22.6 251 172-439 7-263 (282)
197 cd06644 STKc_STK10_LOK Catalyt 100.0 1.2E-38 2.7E-43 303.9 24.2 252 170-438 12-269 (292)
198 cd05099 PTKc_FGFR4 Catalytic d 100.0 7E-39 1.5E-43 308.7 22.5 260 169-444 11-295 (314)
199 cd06638 STKc_myosinIIIA Cataly 100.0 4.7E-39 1E-43 305.8 20.9 263 161-439 9-284 (286)
200 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.3E-38 2.8E-43 300.0 23.6 251 177-440 2-268 (269)
201 KOG0610 Putative serine/threon 100.0 3E-39 6.4E-44 297.9 18.6 255 170-438 77-392 (459)
202 cd05047 PTKc_Tie Catalytic dom 100.0 7E-39 1.5E-43 302.0 21.8 250 176-442 1-268 (270)
203 cd06628 STKc_MAPKKK_Byr2_like 100.0 8.6E-39 1.9E-43 300.8 22.3 250 171-437 1-263 (267)
204 cd05623 STKc_MRCK_alpha Cataly 100.0 5.7E-39 1.2E-43 311.6 21.7 257 170-438 1-266 (332)
205 cd06640 STKc_MST4 Catalytic do 100.0 1.2E-38 2.7E-43 301.5 23.4 250 171-440 5-255 (277)
206 cd05100 PTKc_FGFR3 Catalytic d 100.0 7.1E-39 1.5E-43 311.4 22.2 262 169-446 11-297 (334)
207 cd06656 STKc_PAK3 Catalytic do 100.0 7.8E-39 1.7E-43 305.9 22.1 253 170-441 19-273 (297)
208 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.1E-38 2.4E-43 299.9 22.7 258 170-438 1-264 (267)
209 KOG4257 Focal adhesion tyrosin 100.0 7.3E-40 1.6E-44 314.5 14.8 256 169-443 388-650 (974)
210 cd05624 STKc_MRCK_beta Catalyt 100.0 4.6E-39 1E-43 312.0 20.8 257 170-438 1-266 (331)
211 cd06642 STKc_STK25-YSK1 Cataly 100.0 2.9E-39 6.2E-44 305.8 18.8 248 171-438 5-253 (277)
212 cd05112 PTKc_Itk Catalytic dom 100.0 9E-39 1.9E-43 298.7 21.9 250 170-439 4-255 (256)
213 cd05073 PTKc_Hck Catalytic dom 100.0 8.4E-39 1.8E-43 299.7 21.6 253 169-441 5-259 (260)
214 cd08223 STKc_Nek4 Catalytic do 100.0 1E-38 2.2E-43 298.5 22.0 252 171-438 1-254 (257)
215 cd08218 STKc_Nek1 Catalytic do 100.0 3.2E-39 6.9E-44 301.8 18.5 252 171-438 1-253 (256)
216 cd07863 STKc_CDK4 Catalytic do 100.0 5.5E-39 1.2E-43 305.6 20.4 261 171-438 1-285 (288)
217 KOG0574 STE20-like serine/thre 100.0 3.2E-41 6.8E-46 298.3 4.5 252 172-442 35-287 (502)
218 cd05065 PTKc_EphR_B Catalytic 100.0 9.6E-39 2.1E-43 300.9 21.7 255 170-442 4-268 (269)
219 cd06615 PKc_MEK Catalytic doma 100.0 1E-38 2.2E-43 306.7 22.2 260 170-440 1-289 (308)
220 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 9.7E-39 2.1E-43 303.6 21.8 255 170-438 1-262 (286)
221 KOG0658 Glycogen synthase kina 100.0 2E-40 4.4E-45 302.3 9.7 260 171-442 25-311 (364)
222 PTZ00036 glycogen synthase kin 100.0 2.6E-39 5.6E-44 324.6 18.8 258 169-438 65-351 (440)
223 cd08227 PK_STRAD_alpha Pseudok 100.0 8.9E-39 1.9E-43 309.7 21.7 201 174-379 2-214 (327)
224 cd05057 PTKc_EGFR_like Catalyt 100.0 1.7E-38 3.7E-43 300.8 23.1 257 170-445 7-271 (279)
225 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.8E-38 3.9E-43 301.5 23.2 263 170-442 4-283 (284)
226 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 3.2E-39 7E-44 306.6 17.9 255 170-439 5-267 (284)
227 cd07874 STKc_JNK3 Catalytic do 100.0 4.2E-39 9.2E-44 315.6 19.2 200 168-378 15-221 (355)
228 cd06611 STKc_SLK_like Catalyti 100.0 1.1E-38 2.3E-43 302.4 21.1 253 169-438 4-262 (280)
229 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 9.2E-39 2E-43 303.3 20.6 263 170-442 4-283 (284)
230 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 2.2E-38 4.8E-43 297.2 22.8 239 176-439 1-261 (262)
231 cd07853 STKc_NLK Catalytic dom 100.0 4.1E-39 8.8E-44 317.6 18.7 259 171-438 1-288 (372)
232 cd05058 PTKc_Met_Ron Catalytic 100.0 1.6E-38 3.4E-43 298.2 21.7 249 176-442 1-259 (262)
233 cd06639 STKc_myosinIIIB Cataly 100.0 1.2E-38 2.5E-43 303.9 21.1 262 161-438 13-287 (291)
234 cd07873 STKc_PCTAIRE1 Catalyti 100.0 7.3E-39 1.6E-43 306.8 19.7 260 170-437 6-285 (301)
235 KOG0577 Serine/threonine prote 100.0 3.1E-40 6.8E-45 315.3 10.1 255 172-446 28-286 (948)
236 cd05042 PTKc_Aatyk Catalytic d 100.0 2.2E-38 4.7E-43 298.4 22.6 250 177-439 2-267 (269)
237 KOG0599 Phosphorylase kinase g 100.0 1.2E-39 2.7E-44 284.6 12.8 255 169-438 16-283 (411)
238 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.3E-38 2.7E-43 300.8 20.8 238 177-439 2-273 (274)
239 PTZ00266 NIMA-related protein 100.0 5.1E-39 1.1E-43 336.6 19.8 257 168-437 11-294 (1021)
240 cd06651 STKc_MEKK3 Catalytic d 100.0 2.8E-38 6E-43 297.3 22.8 251 170-437 2-260 (266)
241 cd05041 PTKc_Fes_like Catalyti 100.0 2.2E-38 4.7E-43 295.3 21.9 247 176-440 1-250 (251)
242 cd05046 PTK_CCK4 Pseudokinase 100.0 2.2E-38 4.8E-43 299.3 22.3 256 170-440 5-274 (275)
243 cd08217 STKc_Nek2 Catalytic do 100.0 2.9E-38 6.4E-43 296.4 22.1 256 171-438 1-262 (265)
244 KOG0199 ACK and related non-re 100.0 1.5E-39 3.2E-44 316.0 13.4 254 172-443 112-373 (1039)
245 cd07875 STKc_JNK1 Catalytic do 100.0 1.1E-38 2.4E-43 313.7 19.9 200 168-378 22-228 (364)
246 cd06636 STKc_MAP4K4_6 Catalyti 100.0 2E-38 4.4E-43 300.8 21.0 259 161-437 7-278 (282)
247 cd08528 STKc_Nek10 Catalytic d 100.0 3.6E-38 7.8E-43 296.9 22.5 257 171-440 1-268 (269)
248 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.2E-38 2.6E-43 311.0 19.9 264 167-442 12-303 (343)
249 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.7E-38 5.8E-43 295.9 21.2 237 176-439 1-258 (259)
250 cd05056 PTKc_FAK Catalytic dom 100.0 3.6E-38 7.9E-43 297.1 22.1 256 170-444 6-267 (270)
251 cd06641 STKc_MST3 Catalytic do 100.0 5.9E-38 1.3E-42 296.8 23.5 248 171-438 5-253 (277)
252 cd05083 PTKc_Chk Catalytic dom 100.0 2.8E-38 6.2E-43 295.1 21.0 247 170-441 6-253 (254)
253 cd07846 STKc_CDKL2_3 Catalytic 100.0 5.9E-39 1.3E-43 305.0 16.6 262 170-438 1-283 (286)
254 cd06626 STKc_MEKK4 Catalytic d 100.0 6.5E-38 1.4E-42 294.2 23.3 252 171-437 1-260 (264)
255 cd05580 STKc_PKA Catalytic dom 100.0 3.8E-38 8.3E-43 300.2 21.9 247 170-437 1-253 (290)
256 cd07868 STKc_CDK8 Catalytic do 100.0 2.5E-38 5.5E-43 305.4 20.9 194 175-377 6-218 (317)
257 cd06623 PKc_MAPKK_plant_like C 100.0 7.9E-38 1.7E-42 293.6 23.6 252 171-438 2-256 (264)
258 cd07844 STKc_PCTAIRE_like Cata 100.0 2.3E-38 5E-43 301.8 20.2 260 170-437 5-287 (291)
259 cd07867 STKc_CDC2L6 Catalytic 100.0 2.6E-38 5.6E-43 305.3 20.8 194 175-377 6-218 (317)
260 cd05574 STKc_phototropin_like 100.0 2.9E-38 6.4E-43 304.8 21.2 255 170-438 1-289 (316)
261 cd06632 STKc_MEKK1_plant Catal 100.0 3.9E-38 8.5E-43 294.6 21.4 250 171-437 1-254 (258)
262 cd05110 PTKc_HER4 Catalytic do 100.0 2.9E-38 6.2E-43 302.9 21.0 257 170-445 7-271 (303)
263 PHA03211 serine/threonine kina 100.0 4.5E-38 9.8E-43 314.6 23.1 191 170-375 169-362 (461)
264 PTZ00284 protein kinase; Provi 100.0 1.4E-38 2.9E-43 322.8 19.6 201 165-378 124-348 (467)
265 cd07841 STKc_CDK7 Catalytic do 100.0 4.6E-38 9.9E-43 300.8 22.1 262 171-438 1-282 (298)
266 cd05044 PTKc_c-ros Catalytic d 100.0 2.4E-38 5.2E-43 298.1 19.9 248 177-440 2-268 (269)
267 cd06658 STKc_PAK5 Catalytic do 100.0 1.8E-38 3.8E-43 302.6 19.2 255 172-445 24-280 (292)
268 cd06647 STKc_PAK_I Catalytic d 100.0 6.1E-38 1.3E-42 299.1 22.4 256 170-444 19-276 (293)
269 KOG0667 Dual-specificity tyros 100.0 1.5E-38 3.3E-43 310.3 18.2 194 171-376 187-389 (586)
270 PHA03209 serine/threonine kina 100.0 4.1E-38 8.9E-43 308.4 21.3 190 169-374 65-255 (357)
271 cd05086 PTKc_Aatyk2 Catalytic 100.0 6E-38 1.3E-42 295.3 21.6 251 177-440 2-267 (268)
272 cd07839 STKc_CDK5 Catalytic do 100.0 1.2E-38 2.6E-43 302.6 17.0 261 171-438 1-281 (284)
273 cd06605 PKc_MAPKK Catalytic do 100.0 1.3E-38 2.7E-43 299.3 16.8 253 171-438 2-257 (265)
274 cd06652 STKc_MEKK2 Catalytic d 100.0 8.5E-38 1.8E-42 293.8 22.4 252 170-438 2-261 (265)
275 cd05609 STKc_MAST Catalytic do 100.0 7.7E-38 1.7E-42 300.3 22.5 254 171-439 2-271 (305)
276 PHA03207 serine/threonine kina 100.0 2.9E-38 6.4E-43 313.3 19.9 256 169-439 91-376 (392)
277 cd08220 STKc_Nek8 Catalytic do 100.0 8.3E-38 1.8E-42 292.1 21.8 251 171-438 1-253 (256)
278 cd07870 STKc_PFTAIRE2 Catalyti 100.0 5E-38 1.1E-42 299.5 20.7 262 168-437 3-287 (291)
279 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.2E-37 2.5E-42 294.0 22.9 256 171-438 2-269 (272)
280 cd06630 STKc_MEKK1 Catalytic d 100.0 9.7E-38 2.1E-42 293.8 22.0 254 171-437 1-263 (268)
281 cd07833 STKc_CDKL Catalytic do 100.0 2.6E-38 5.6E-43 300.9 18.2 260 171-437 2-284 (288)
282 cd08225 STKc_Nek5 Catalytic do 100.0 3.8E-38 8.2E-43 294.6 19.0 252 171-438 1-254 (257)
283 cd06917 STKc_NAK1_like Catalyt 100.0 1.3E-37 2.9E-42 294.4 22.8 249 171-438 2-255 (277)
284 cd06607 STKc_TAO Catalytic dom 100.0 1.2E-37 2.6E-42 299.2 22.7 253 170-442 15-271 (307)
285 cd06608 STKc_myosinIII_like Ca 100.0 6.9E-38 1.5E-42 295.7 20.6 254 168-437 4-271 (275)
286 smart00219 TyrKc Tyrosine kina 100.0 1.4E-37 3E-42 290.7 22.3 251 172-439 1-258 (258)
287 cd05578 STKc_Yank1 Catalytic d 100.0 2.8E-38 6.1E-43 295.8 17.4 250 171-436 1-253 (258)
288 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.1E-37 2.4E-42 296.5 21.8 261 170-438 1-266 (287)
289 cd06659 STKc_PAK6 Catalytic do 100.0 4.9E-38 1.1E-42 300.3 19.3 245 175-438 26-271 (297)
290 KOG1025 Epidermal growth facto 100.0 6.7E-39 1.5E-43 316.4 13.6 257 172-447 698-962 (1177)
291 cd07860 STKc_CDK2_3 Catalytic 100.0 4.3E-38 9.3E-43 298.8 18.6 262 171-438 1-281 (284)
292 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.8E-38 6.1E-43 295.8 17.0 239 176-439 1-257 (258)
293 cd06614 STKc_PAK Catalytic dom 100.0 1.5E-37 3.2E-42 295.5 22.1 253 168-438 17-270 (286)
294 KOG4279 Serine/threonine prote 100.0 7.8E-39 1.7E-43 310.6 13.4 250 176-440 581-834 (1226)
295 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.7E-37 3.7E-42 292.9 22.0 256 172-442 1-272 (273)
296 cd05577 STKc_GRK Catalytic dom 100.0 2.6E-37 5.5E-42 292.5 23.0 247 178-437 1-253 (277)
297 cd07836 STKc_Pho85 Catalytic d 100.0 1.5E-37 3.2E-42 295.1 21.1 261 171-437 1-280 (284)
298 cd06648 STKc_PAK_II Catalytic 100.0 2.8E-37 6E-42 293.4 22.7 252 171-441 20-273 (285)
299 cd07843 STKc_CDC2L1 Catalytic 100.0 1.5E-37 3.3E-42 296.5 20.7 260 170-438 5-290 (293)
300 KOG4717 Serine/threonine prote 100.0 4.4E-38 9.5E-43 296.3 16.5 249 170-437 18-269 (864)
301 cd07835 STKc_CDK1_like Catalyt 100.0 8.8E-38 1.9E-42 296.6 18.2 261 172-438 1-280 (283)
302 cd05122 PKc_STE Catalytic doma 100.0 5.2E-37 1.1E-41 285.6 23.0 250 171-438 1-251 (253)
303 cd07832 STKc_CCRK Catalytic do 100.0 1.9E-37 4.1E-42 294.6 20.3 261 171-438 1-282 (286)
304 cd06617 PKc_MKK3_6 Catalytic d 100.0 2.8E-37 6.1E-42 293.0 21.4 256 170-441 1-265 (283)
305 cd06635 STKc_TAO1 Catalytic do 100.0 7.3E-37 1.6E-41 295.0 24.2 254 172-445 27-284 (317)
306 cd05572 STKc_cGK_PKG Catalytic 100.0 2.3E-37 4.9E-42 290.3 20.1 245 178-437 1-251 (262)
307 cd06606 STKc_MAPKKK Catalytic 100.0 6.8E-37 1.5E-41 286.0 22.9 252 171-438 1-257 (260)
308 cd06616 PKc_MKK4 Catalytic dom 100.0 2E-37 4.4E-42 294.9 19.4 256 171-438 5-267 (288)
309 cd07837 STKc_CdkB_plant Cataly 100.0 2.3E-37 5E-42 295.5 19.5 264 170-438 1-291 (295)
310 KOG0584 Serine/threonine prote 100.0 2.2E-38 4.9E-43 306.4 12.5 252 173-442 43-301 (632)
311 PLN00009 cyclin-dependent kina 100.0 2.8E-37 6E-42 294.8 19.8 262 170-437 2-283 (294)
312 cd05633 STKc_GRK3 Catalytic do 100.0 5.1E-37 1.1E-41 290.6 21.3 246 177-439 1-256 (279)
313 cd06627 STKc_Cdc7_like Catalyt 100.0 8.2E-37 1.8E-41 284.8 22.3 249 171-437 1-250 (254)
314 cd07842 STKc_CDK8_like Catalyt 100.0 3.6E-37 7.8E-42 297.1 20.3 205 171-379 1-220 (316)
315 KOG0596 Dual specificity; seri 100.0 7.7E-38 1.7E-42 297.5 14.3 258 170-443 361-632 (677)
316 cd07855 STKc_ERK5 Catalytic do 100.0 3.2E-37 6.9E-42 299.8 17.8 271 169-447 4-304 (334)
317 cd07831 STKc_MOK Catalytic dom 100.0 8.6E-37 1.9E-41 289.5 20.3 257 172-438 1-279 (282)
318 cd08215 STKc_Nek Catalytic dom 100.0 1.6E-36 3.5E-41 283.3 21.8 253 171-438 1-255 (258)
319 KOG0200 Fibroblast/platelet-de 100.0 5.2E-37 1.1E-41 317.2 20.2 263 165-442 291-579 (609)
320 cd05611 STKc_Rim15_like Cataly 100.0 1.6E-36 3.6E-41 284.1 21.4 244 176-437 2-247 (260)
321 cd07838 STKc_CDK4_6_like Catal 100.0 2E-36 4.4E-41 287.6 22.3 259 172-437 1-283 (287)
322 cd07845 STKc_CDK10 Catalytic d 100.0 1.2E-36 2.7E-41 292.5 20.9 263 169-438 6-290 (309)
323 cd07849 STKc_ERK1_2_like Catal 100.0 5.5E-37 1.2E-41 298.4 18.4 266 169-444 4-299 (336)
324 cd06653 STKc_MEKK3_like_1 Cata 100.0 2.5E-36 5.4E-41 283.7 22.2 252 170-438 2-261 (264)
325 cd06657 STKc_PAK4 Catalytic do 100.0 1.2E-36 2.6E-41 289.9 20.3 250 176-444 26-277 (292)
326 cd05579 STKc_MAST_like Catalyt 100.0 6.8E-37 1.5E-41 287.2 18.0 246 178-439 1-255 (265)
327 PHA03390 pk1 serine/threonine- 100.0 3.4E-36 7.5E-41 283.1 22.7 250 162-437 6-261 (267)
328 cd07840 STKc_CDK9_like Catalyt 100.0 1.6E-36 3.4E-41 288.4 20.1 259 172-437 1-283 (287)
329 PHA02882 putative serine/threo 100.0 1.9E-36 4.1E-41 288.9 20.4 257 170-439 12-293 (294)
330 cd07852 STKc_MAPK15 Catalytic 100.0 1.5E-36 3.2E-41 295.5 20.1 261 169-438 6-295 (337)
331 cd08530 STKc_CNK2-like Catalyt 100.0 1.2E-36 2.5E-41 284.3 18.6 251 171-438 1-253 (256)
332 cd06634 STKc_TAO2 Catalytic do 100.0 2.4E-36 5.1E-41 290.3 21.1 256 170-445 15-274 (308)
333 cd08226 PK_STRAD_beta Pseudoki 100.0 2.9E-36 6.3E-41 292.3 21.9 258 176-441 4-312 (328)
334 cd05118 STKc_CMGC Catalytic do 100.0 1.5E-36 3.3E-41 287.9 19.4 260 172-438 1-280 (283)
335 cd07850 STKc_JNK Catalytic dom 100.0 2.1E-36 4.4E-41 296.3 20.6 200 168-378 14-220 (353)
336 cd06618 PKc_MKK7 Catalytic dom 100.0 3.2E-36 6.9E-41 287.8 21.0 254 170-439 15-274 (296)
337 cd07877 STKc_p38alpha_MAPK14 C 100.0 3.5E-36 7.5E-41 293.6 21.5 274 162-447 9-310 (345)
338 KOG0586 Serine/threonine prote 100.0 9.6E-37 2.1E-41 294.8 17.2 250 169-438 55-306 (596)
339 cd08216 PK_STRAD Pseudokinase 100.0 2.9E-36 6.2E-41 290.6 20.5 259 175-439 7-296 (314)
340 cd07865 STKc_CDK9 Catalytic do 100.0 2.7E-36 5.8E-41 290.2 20.1 262 169-438 11-307 (310)
341 cd05581 STKc_PDK1 Catalytic do 100.0 8.5E-37 1.8E-41 289.1 16.4 250 170-437 1-276 (280)
342 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.1E-36 2.4E-41 296.3 17.4 262 169-438 4-291 (337)
343 PTZ00024 cyclin-dependent prot 100.0 3.6E-36 7.8E-41 292.6 20.9 263 170-439 8-314 (335)
344 cd07864 STKc_CDK12 Catalytic d 100.0 2.2E-36 4.9E-41 289.7 19.1 264 168-438 5-299 (302)
345 cd05606 STKc_beta_ARK Catalyti 100.0 7.3E-36 1.6E-40 282.6 22.4 244 177-437 1-254 (278)
346 KOG0579 Ste20-like serine/thre 100.0 5.1E-38 1.1E-42 302.1 7.6 255 170-441 32-292 (1187)
347 cd07834 STKc_MAPK Catalytic do 100.0 1.4E-36 3E-41 294.9 17.7 268 171-446 1-298 (330)
348 cd06633 STKc_TAO3 Catalytic do 100.0 9.7E-36 2.1E-40 286.6 23.1 247 172-438 23-273 (313)
349 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 2.2E-36 4.8E-41 292.8 18.7 275 165-451 5-302 (328)
350 KOG0986 G protein-coupled rece 100.0 2E-37 4.4E-42 288.1 10.7 255 170-437 185-445 (591)
351 cd05583 STKc_MSK_N N-terminal 100.0 5.2E-36 1.1E-40 285.2 20.2 256 171-440 1-265 (288)
352 cd05613 STKc_MSK1_N N-terminal 100.0 8.3E-36 1.8E-40 284.1 21.5 254 171-438 1-268 (290)
353 PHA03210 serine/threonine kina 100.0 3.4E-36 7.3E-41 306.5 19.5 203 168-374 146-367 (501)
354 KOG1035 eIF-2alpha kinase GCN2 100.0 9.8E-37 2.1E-41 313.3 15.0 255 166-437 475-870 (1351)
355 cd07879 STKc_p38delta_MAPK13 C 100.0 4.9E-36 1.1E-40 292.3 18.9 256 170-438 15-297 (342)
356 cd07830 STKc_MAK_like Catalyti 100.0 6E-36 1.3E-40 283.9 18.7 259 172-438 1-280 (283)
357 cd07829 STKc_CDK_like Catalyti 100.0 4E-36 8.6E-41 284.9 17.3 260 172-438 1-279 (282)
358 cd07866 STKc_BUR1 Catalytic do 100.0 3.5E-36 7.6E-41 289.5 17.2 263 169-438 7-308 (311)
359 cd08222 STKc_Nek11 Catalytic d 100.0 3E-36 6.4E-41 282.4 16.0 253 171-438 1-257 (260)
360 cd05123 STKc_AGC Catalytic dom 100.0 7.6E-36 1.6E-40 277.8 18.5 239 178-434 1-240 (250)
361 KOG4250 TANK binding protein k 100.0 9.7E-37 2.1E-41 298.7 11.8 203 172-380 15-229 (732)
362 KOG0604 MAP kinase-activated p 100.0 9.9E-37 2.1E-41 269.8 10.7 258 169-443 60-328 (400)
363 KOG0983 Mitogen-activated prot 100.0 2.4E-36 5.2E-41 264.1 12.0 253 171-439 93-350 (391)
364 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.4E-35 3.1E-40 289.0 18.9 257 168-436 13-296 (343)
365 cd07851 STKc_p38 Catalytic dom 100.0 5.8E-36 1.3E-40 291.9 15.8 272 168-451 13-312 (343)
366 KOG0690 Serine/threonine prote 100.0 1E-36 2.2E-41 272.4 8.8 248 169-437 167-423 (516)
367 KOG4645 MAPKKK (MAP kinase kin 100.0 1.9E-37 4.2E-42 320.0 4.4 255 170-441 1235-1497(1509)
368 cd07854 STKc_MAPK4_6 Catalytic 100.0 2.1E-35 4.4E-40 287.9 17.9 261 170-441 5-304 (342)
369 cd05610 STKc_MASTL Catalytic d 100.0 9.9E-35 2.2E-39 304.7 22.2 148 170-323 4-152 (669)
370 cd07857 STKc_MPK1 Catalytic do 100.0 5.7E-35 1.2E-39 283.7 18.9 258 171-436 1-290 (332)
371 KOG0666 Cyclin C-dependent kin 100.0 5E-36 1.1E-40 266.5 10.4 203 169-376 23-241 (438)
372 KOG0607 MAP kinase-interacting 100.0 1.3E-35 2.9E-40 264.7 12.3 260 161-437 74-360 (463)
373 KOG1024 Receptor-like protein 100.0 2.9E-35 6.4E-40 269.0 14.5 265 162-442 276-555 (563)
374 KOG0587 Traf2- and Nck-interac 100.0 1.7E-34 3.8E-39 288.2 17.8 255 167-438 16-282 (953)
375 cd05576 STKc_RPK118_like Catal 100.0 5.8E-34 1.3E-38 263.1 18.2 219 181-432 4-223 (237)
376 KOG0603 Ribosomal protein S6 k 100.0 8.1E-35 1.8E-39 282.9 12.7 243 168-440 320-566 (612)
377 KOG0662 Cyclin-dependent kinas 100.0 1.5E-34 3.3E-39 237.9 11.2 260 172-438 4-283 (292)
378 KOG1006 Mitogen-activated prot 100.0 3.1E-36 6.8E-41 262.4 0.5 253 174-438 68-327 (361)
379 KOG1151 Tousled-like protein k 100.0 1.3E-34 2.8E-39 268.5 11.1 256 170-437 463-740 (775)
380 KOG0669 Cyclin T-dependent kin 100.0 5.8E-36 1.3E-40 258.8 1.2 265 171-442 18-319 (376)
381 KOG0612 Rho-associated, coiled 100.0 1.3E-34 2.7E-39 295.7 9.6 259 164-439 69-339 (1317)
382 KOG4236 Serine/threonine prote 100.0 1.1E-34 2.3E-39 274.1 8.1 245 175-436 569-817 (888)
383 KOG0671 LAMMER dual specificit 100.0 1.8E-34 3.9E-39 263.9 9.0 260 169-441 88-410 (415)
384 smart00220 S_TKc Serine/Threon 100.0 1.1E-32 2.4E-37 254.6 19.5 239 182-437 1-240 (244)
385 KOG1027 Serine/threonine prote 100.0 2.8E-34 6E-39 285.4 8.3 246 172-439 511-768 (903)
386 PLN03225 Serine/threonine-prot 100.0 4.7E-33 1E-37 285.1 17.0 261 168-438 130-450 (566)
387 KOG0696 Serine/threonine prote 100.0 8.8E-34 1.9E-38 260.9 8.0 244 170-431 349-594 (683)
388 PLN03224 probable serine/threo 100.0 2.4E-32 5.1E-37 273.1 18.4 264 169-438 144-500 (507)
389 KOG0614 cGMP-dependent protein 100.0 2.9E-34 6.4E-39 270.2 4.4 252 170-438 420-677 (732)
390 KOG0695 Serine/threonine prote 100.0 5.9E-33 1.3E-37 249.3 11.3 252 169-431 249-503 (593)
391 KOG0984 Mitogen-activated prot 100.0 2.9E-32 6.3E-37 229.4 9.9 206 167-378 43-255 (282)
392 KOG0608 Warts/lats-like serine 100.0 1.5E-31 3.3E-36 257.7 15.8 203 171-379 630-875 (1034)
393 cd00180 PKc Catalytic domain o 100.0 5.3E-30 1.1E-34 231.1 21.1 211 178-438 1-214 (215)
394 KOG1290 Serine/threonine prote 100.0 5.2E-30 1.1E-34 240.9 18.1 131 170-308 78-221 (590)
395 KOG0668 Casein kinase II, alph 100.0 3.1E-31 6.7E-36 226.5 8.4 254 168-437 36-321 (338)
396 KOG1152 Signal transduction se 100.0 1.3E-30 2.8E-35 249.3 9.5 203 167-377 558-771 (772)
397 KOG0665 Jun-N-terminal kinase 100.0 2E-30 4.2E-35 232.2 8.4 256 170-438 17-310 (369)
398 smart00221 STYKc Protein kinas 100.0 1.3E-28 2.9E-33 224.9 19.0 199 172-377 1-202 (225)
399 KOG0576 Mitogen-activated prot 100.0 1.3E-30 2.9E-35 253.1 4.5 252 169-436 14-269 (829)
400 KOG1345 Serine/threonine kinas 100.0 6.4E-30 1.4E-34 223.7 7.3 251 169-437 23-283 (378)
401 KOG0664 Nemo-like MAPK-related 100.0 9.3E-31 2E-35 229.1 0.6 195 174-376 57-259 (449)
402 KOG0670 U4/U6-associated splic 100.0 9.4E-29 2E-33 233.8 7.9 200 168-377 430-637 (752)
403 smart00750 KIND kinase non-cat 99.9 3.2E-27 7E-32 207.6 13.7 170 254-443 1-170 (176)
404 PLN00181 protein SPA1-RELATED; 99.9 4.9E-28 1.1E-32 260.3 9.3 195 225-438 28-265 (793)
405 KOG1167 Serine/threonine prote 99.9 1.4E-27 3.1E-32 221.6 10.6 195 168-376 34-279 (418)
406 KOG0195 Integrin-linked kinase 99.9 4.6E-27 1E-31 205.9 5.8 252 172-442 192-446 (448)
407 PRK09188 serine/threonine prot 99.9 1.1E-24 2.4E-29 209.2 15.4 166 168-350 16-195 (365)
408 COG0515 SPS1 Serine/threonine 99.9 1.3E-22 2.9E-27 195.9 22.3 259 172-438 2-275 (384)
409 KOG1164 Casein kinase (serine/ 99.9 5.5E-23 1.2E-27 198.0 18.9 258 171-443 19-298 (322)
410 KOG0590 Checkpoint kinase and 99.9 4.6E-24 9.9E-29 218.2 7.0 254 173-437 321-584 (601)
411 KOG1240 Protein kinase contain 99.9 3.8E-24 8.3E-29 218.9 3.8 253 171-443 24-296 (1431)
412 KOG1165 Casein kinase (serine/ 99.9 7.9E-22 1.7E-26 177.9 16.4 258 170-442 28-299 (449)
413 KOG1023 Natriuretic peptide re 99.9 1.6E-22 3.4E-27 197.6 11.9 218 223-445 1-227 (484)
414 KOG1163 Casein kinase (serine/ 99.9 1.8E-22 3.8E-27 174.4 10.6 254 169-437 14-279 (341)
415 cd05147 RIO1_euk RIO kinase fa 99.9 2.7E-22 5.9E-27 177.3 11.6 143 175-325 2-167 (190)
416 PRK10359 lipopolysaccharide co 99.9 1.6E-22 3.5E-27 180.7 9.8 184 158-369 17-216 (232)
417 cd05145 RIO1_like RIO kinase f 99.9 5E-21 1.1E-25 170.0 15.5 143 175-326 2-168 (190)
418 PF14531 Kinase-like: Kinase-l 99.9 2.2E-21 4.9E-26 178.5 11.5 236 171-429 13-288 (288)
419 PRK12274 serine/threonine prot 99.8 4E-20 8.6E-25 161.7 14.1 184 174-375 6-207 (218)
420 KOG0603 Ribosomal protein S6 k 99.8 3.5E-21 7.6E-26 188.2 1.3 187 178-377 2-193 (612)
421 PRK10345 hypothetical protein; 99.8 6.5E-19 1.4E-23 157.2 14.4 136 173-322 5-156 (210)
422 KOG1166 Mitotic checkpoint ser 99.8 9.8E-19 2.1E-23 182.7 12.8 246 168-442 696-953 (974)
423 smart00090 RIO RIO-like kinase 99.8 2.4E-18 5.3E-23 157.3 13.9 146 170-326 28-199 (237)
424 PRK14879 serine/threonine prot 99.8 2.7E-18 5.9E-23 155.4 13.6 137 176-324 2-143 (211)
425 cd05144 RIO2_C RIO kinase fami 99.8 2.9E-18 6.2E-23 153.5 12.8 148 163-326 8-176 (198)
426 KOG4158 BRPK/PTEN-induced prot 99.8 3.1E-18 6.7E-23 158.3 13.0 200 227-444 274-516 (598)
427 TIGR03724 arch_bud32 Kae1-asso 99.8 7.5E-18 1.6E-22 151.0 12.5 133 177-324 1-138 (199)
428 KOG1033 eIF-2alpha kinase PEK/ 99.7 3.7E-19 8E-24 170.9 3.4 173 243-435 330-509 (516)
429 PRK09605 bifunctional UGMP fam 99.7 7.1E-18 1.5E-22 173.5 12.9 141 169-325 332-477 (535)
430 cd05119 RIO RIO kinase family, 99.7 1.3E-16 2.8E-21 141.5 12.1 139 175-326 2-165 (187)
431 KOG0606 Microtubule-associated 99.7 5.2E-17 1.1E-21 167.0 7.8 207 170-431 83-305 (1205)
432 cd05120 APH_ChoK_like Aminogly 99.7 7.1E-16 1.5E-20 131.4 13.0 135 174-324 2-138 (155)
433 PRK01723 3-deoxy-D-manno-octul 99.6 2E-15 4.3E-20 138.4 14.0 139 175-325 36-192 (239)
434 KOG0590 Checkpoint kinase and 99.6 1.5E-16 3.2E-21 163.2 1.5 255 170-436 20-284 (601)
435 PLN03150 hypothetical protein; 99.6 6.2E-15 1.3E-19 153.4 9.2 70 3-72 441-510 (623)
436 TIGR01982 UbiB 2-polyprenylphe 99.5 3.4E-14 7.4E-19 141.5 12.7 144 175-326 122-308 (437)
437 KOG1266 Protein kinase [Signal 99.5 3E-14 6.6E-19 129.2 7.3 203 220-439 118-332 (458)
438 KOG0601 Cyclin-dependent kinas 99.5 6.8E-14 1.5E-18 137.4 7.1 250 171-439 115-380 (524)
439 KOG1243 Protein kinase [Genera 99.4 3.5E-12 7.7E-17 126.6 13.4 169 190-373 33-201 (690)
440 PRK04750 ubiB putative ubiquin 99.4 1.8E-12 3.9E-17 130.7 11.5 149 169-326 119-315 (537)
441 cd05151 ChoK Choline Kinase (C 99.4 2.4E-12 5.3E-17 112.1 9.5 130 176-324 4-136 (170)
442 PLN03150 hypothetical protein; 99.3 3E-12 6.6E-17 133.4 6.4 88 5-92 419-509 (623)
443 cd05146 RIO3_euk RIO kinase fa 99.3 5.8E-11 1.3E-15 104.1 13.5 140 175-326 2-175 (197)
444 KOG0601 Cyclin-dependent kinas 99.3 2.3E-12 5E-17 126.8 5.0 248 168-440 263-516 (524)
445 COG3642 Mn2+-dependent serine/ 99.2 9.6E-11 2.1E-15 99.2 11.6 133 177-324 3-140 (204)
446 cd05154 ACAD10_11_like Acyl-Co 99.2 1.2E-10 2.5E-15 106.1 12.1 143 176-324 4-206 (223)
447 KOG3087 Serine/threonine prote 99.2 6.4E-10 1.4E-14 93.7 12.5 146 174-324 11-165 (229)
448 PLN00113 leucine-rich repeat r 99.2 5.1E-11 1.1E-15 132.2 7.7 92 3-94 474-568 (968)
449 PF13855 LRR_8: Leucine rich r 99.1 2.8E-11 6.1E-16 85.7 3.5 60 4-64 1-61 (61)
450 KOG0606 Microtubule-associated 99.1 2.6E-11 5.7E-16 125.7 0.8 251 168-433 802-1084(1205)
451 PF01163 RIO1: RIO1 family; I 99.0 3.5E-09 7.6E-14 92.6 12.2 129 185-326 1-157 (188)
452 PRK15123 lipopolysaccharide co 99.0 7.9E-09 1.7E-13 95.9 14.5 144 176-324 28-194 (268)
453 KOG0617 Ras suppressor protein 99.0 6E-11 1.3E-15 98.2 -0.1 83 2-87 31-116 (264)
454 KOG0617 Ras suppressor protein 99.0 6.8E-11 1.5E-15 97.9 -1.0 87 2-90 54-144 (264)
455 KOG3741 Poly(A) ribonuclease s 98.9 1.6E-08 3.4E-13 98.1 13.2 170 182-374 288-475 (655)
456 COG4248 Uncharacterized protei 98.9 2.9E-08 6.3E-13 93.9 13.2 253 174-442 15-300 (637)
457 KOG2137 Protein kinase [Signal 98.9 1.2E-09 2.6E-14 109.4 3.3 155 278-443 105-270 (700)
458 PF14580 LRR_9: Leucine-rich r 98.8 3.3E-09 7.2E-14 91.3 4.0 77 4-85 19-100 (175)
459 COG0478 RIO-like serine/threon 98.8 5.5E-08 1.2E-12 87.6 11.4 138 172-324 93-251 (304)
460 COG0661 AarF Predicted unusual 98.8 8.1E-08 1.8E-12 96.6 12.6 143 176-326 131-316 (517)
461 KOG0472 Leucine-rich repeat pr 98.7 7.1E-09 1.5E-13 97.1 2.3 83 2-86 433-541 (565)
462 PF06293 Kdo: Lipopolysacchari 98.6 3.1E-07 6.8E-12 82.4 11.4 105 215-325 57-171 (206)
463 PRK09902 hypothetical protein; 98.6 8.5E-07 1.8E-11 78.1 13.2 141 178-324 26-179 (216)
464 TIGR02172 Fb_sc_TIGR02172 Fibr 98.6 9.3E-07 2E-11 80.4 14.0 139 176-324 7-182 (226)
465 PF12799 LRR_4: Leucine Rich r 98.6 3.4E-08 7.4E-13 64.1 3.0 36 5-41 2-37 (44)
466 PF12799 LRR_4: Leucine Rich r 98.6 3.6E-08 7.7E-13 64.0 2.8 40 28-69 1-40 (44)
467 KOG0444 Cytoskeletal regulator 98.6 1.1E-08 2.4E-13 100.8 0.6 82 2-86 101-186 (1255)
468 PF14580 LRR_9: Leucine-rich r 98.6 2.3E-08 5E-13 86.1 2.3 82 2-87 40-127 (175)
469 KOG4194 Membrane glycoprotein 98.5 1.5E-08 3.2E-13 99.2 -0.5 84 4-87 317-406 (873)
470 KOG4194 Membrane glycoprotein 98.5 1.3E-08 2.9E-13 99.5 -1.8 89 2-91 291-383 (873)
471 PF13855 LRR_8: Leucine rich r 98.5 1.1E-07 2.4E-12 67.1 3.2 58 28-85 1-61 (61)
472 PF06176 WaaY: Lipopolysacchar 98.5 2.3E-06 5E-11 75.7 12.1 140 169-324 30-183 (229)
473 KOG1235 Predicted unusual prot 98.5 1.1E-06 2.5E-11 88.1 11.4 145 175-326 166-356 (538)
474 KOG0444 Cytoskeletal regulator 98.5 1.9E-08 4.1E-13 99.2 -1.3 81 3-86 221-304 (1255)
475 KOG4237 Extracellular matrix p 98.5 6.3E-08 1.4E-12 90.7 2.0 88 2-89 272-362 (498)
476 KOG0472 Leucine-rich repeat pr 98.4 3E-08 6.5E-13 93.0 -1.5 85 1-89 203-291 (565)
477 COG1718 RIO1 Serine/threonine 98.4 5.8E-06 1.3E-10 74.0 12.5 157 159-326 34-217 (268)
478 KOG0618 Serine/threonine phosp 98.4 3.9E-08 8.4E-13 101.2 -1.7 80 3-84 382-487 (1081)
479 KOG1259 Nischarin, modulator o 98.4 1.1E-07 2.5E-12 85.9 0.9 78 5-86 285-365 (490)
480 KOG0618 Serine/threonine phosp 98.3 7.5E-08 1.6E-12 99.2 -0.9 70 3-74 358-428 (1081)
481 PF01636 APH: Phosphotransfera 98.3 8.4E-06 1.8E-10 74.6 12.6 143 176-324 3-197 (239)
482 KOG0576 Mitogen-activated prot 98.3 2E-07 4.4E-12 92.7 0.6 181 176-375 248-430 (829)
483 PF12260 PIP49_C: Protein-kina 98.3 5.1E-06 1.1E-10 73.1 9.1 105 217-325 7-112 (188)
484 cd05150 APH Aminoglycoside 3'- 98.2 2E-05 4.4E-10 72.8 12.7 139 178-323 6-192 (244)
485 PLN02876 acyl-CoA dehydrogenas 98.2 3.2E-05 6.9E-10 84.0 14.9 149 175-325 43-258 (822)
486 PRK15370 E3 ubiquitin-protein 98.2 2.4E-06 5.2E-11 90.3 5.8 75 5-86 200-275 (754)
487 PRK15387 E3 ubiquitin-protein 98.1 3E-06 6.5E-11 89.3 5.4 32 53-85 343-374 (788)
488 KOG4579 Leucine-rich repeat (L 98.1 4.7E-07 1E-11 72.6 -1.1 72 4-78 53-125 (177)
489 KOG0532 Leucine-rich repeat (L 98.0 6.7E-07 1.4E-11 87.7 -1.4 78 6-86 145-224 (722)
490 PRK15387 E3 ubiquitin-protein 98.0 5.3E-06 1.2E-10 87.5 4.8 71 5-84 223-293 (788)
491 COG2112 Predicted Ser/Thr prot 98.0 5.6E-05 1.2E-09 64.1 9.9 130 173-325 25-156 (201)
492 PRK10593 hypothetical protein; 98.0 0.00014 3E-09 69.1 14.1 77 174-256 18-100 (297)
493 PF10707 YrbL-PhoP_reg: PhoP r 98.0 0.00019 4.2E-09 63.4 13.8 136 174-322 5-170 (199)
494 PRK15370 E3 ubiquitin-protein 98.0 7.7E-06 1.7E-10 86.6 5.7 77 4-87 220-297 (754)
495 PF13095 FTA2: Kinetochore Sim 98.0 7.8E-05 1.7E-09 65.3 10.8 128 170-322 37-206 (207)
496 cd05155 APH_ChoK_like_1 Unchar 98.0 6.9E-05 1.5E-09 68.8 10.6 73 176-257 3-82 (235)
497 KOG4237 Extracellular matrix p 97.9 1.6E-06 3.5E-11 81.5 -0.6 70 5-76 68-140 (498)
498 PLN03210 Resistant to P. syrin 97.9 1.3E-05 2.7E-10 90.3 6.0 83 3-86 777-859 (1153)
499 KOG1259 Nischarin, modulator o 97.9 3.9E-06 8.5E-11 76.1 1.0 60 3-65 306-365 (490)
500 PLN03210 Resistant to P. syrin 97.8 2.4E-05 5.2E-10 88.1 6.5 88 2-90 632-721 (1153)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=4e-56 Score=489.89 Aligned_cols=419 Identities=28% Similarity=0.482 Sum_probs=297.6
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcCC---Cccce
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESVR---KVPHL 78 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~---~l~~l 78 (468)
++++|+.|+|++|+++|.+|..+++|++|++|+|++|+++|.+|..+.++++|+.|+|++|+++|.+|..+. .|..|
T Consensus 497 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l 576 (968)
T PLN00113 497 SLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQV 576 (968)
T ss_pred hhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEE
Confidence 567889999999999999999999999999999999999999999999999999999999999999998654 45667
Q ss_pred ecccccccccCCCCCC-----------C-----------CCCCCCCccc-cc--eehhhhHHHHHHHHHHHHhhheeccC
Q 012219 79 YVYGKNFDVEIPNTSE-----------N-----------SPPPHHKKIA-TR--LVAIILPMVALLALIFGILFVRRRRD 133 (468)
Q Consensus 79 ~~~~n~l~~~~p~~~~-----------~-----------~~~~~~~~~~-~~--i~~i~~~~~~l~~l~~~~~~~~~~~~ 133 (468)
++++|++.+.+|.... + .++|...... .. ++++++++++++++++.+++++++++
T Consensus 577 ~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (968)
T PLN00113 577 NISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRKTPSWWFYITCTLGAFLVLALVAFGFVFIRGRN 656 (968)
T ss_pred eccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccccccceeeeehhHHHHHHHHHHHHHHHHHHHHhhh
Confidence 8999999887775311 0 0112111011 11 11112222222222222222222222
Q ss_pred -CccCCCCccccccccccchhcc--CCCCcCHHHHHHHhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhh
Q 012219 134 -KRVEPAETGEITKCADEFAIWN--YDGRITFQDMIEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEE 209 (468)
Q Consensus 134 -~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~ 209 (468)
.+.+..+.... .-+..... ....++++++ ...+...+.||+|+||.||+|.. .++..||||++......
T Consensus 657 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~- 729 (968)
T PLN00113 657 NLELKRVENEDG---TWELQFFDSKVSKSITINDI---LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI- 729 (968)
T ss_pred cccccccccccc---cccccccccccchhhhHHHH---HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc-
Confidence 11111110000 00000000 0112344443 34577788999999999999975 57899999998754321
Q ss_pred hhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHH
Q 012219 210 LASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLH 289 (468)
Q Consensus 210 ~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH 289 (468)
...|++.+++++|||||+++|+|.+.+..++||||+++|+|.++++. ++|.++.+++.|+|+|++|||
T Consensus 730 ------~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~------l~~~~~~~i~~~ia~~L~yLH 797 (968)
T PLN00113 730 ------PSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN------LSWERRRKIAIGIAKALRFLH 797 (968)
T ss_pred ------cHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc------CCHHHHHHHHHHHHHHHHHhc
Confidence 12468889999999999999999999999999999999999999963 889999999999999999999
Q ss_pred hcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHH
Q 012219 290 HDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVL 369 (468)
Q Consensus 290 ~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~ 369 (468)
+.++++|+||||||+||+++.++.+++. ||....... .....+++.|+|||++.+..++.++|||||||++|||+
T Consensus 798 ~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~ 872 (968)
T PLN00113 798 CRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT----DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELL 872 (968)
T ss_pred cCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc----CCCccccccccCcccccCCCCCcccchhhHHHHHHHHH
Confidence 8778899999999999999999988875 665543321 12236789999999999999999999999999999999
Q ss_pred hCCCCCCcccccc-----hhh--hcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 370 MGKHPGELLSSSS-----WSL--DKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 370 tg~~p~~~~~~~~-----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
||+.||+...... |.. .........+|+.+...... ..+++..+.+++.+||+.||++||||.+|++.|+++
T Consensus 873 tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~ 951 (968)
T PLN00113 873 TGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSV-NQNEIVEVMNLALHCTATDPTARPCANDVLKTLESA 951 (968)
T ss_pred hCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCc-cHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHh
Confidence 9999986432111 110 01112233445544332211 224556688999999999999999999999999987
Q ss_pred CCC
Q 012219 443 NKA 445 (468)
Q Consensus 443 ~~~ 445 (468)
...
T Consensus 952 ~~~ 954 (968)
T PLN00113 952 SRS 954 (968)
T ss_pred hcc
Confidence 654
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-56 Score=431.45 Aligned_cols=282 Identities=39% Similarity=0.686 Sum_probs=240.3
Q ss_pred CCCCcCHHHHHHHhhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEE
Q 012219 156 YDGRITFQDMIEATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLY 235 (468)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 235 (468)
....|++.++..||++|...+.||+|+||.||+|.+++|+.||||++....... .++|.+|++++.+++|||+|+++
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~---~~eF~~Ei~~ls~l~H~Nlv~Ll 137 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG---EREFLNEVEILSRLRHPNLVKLL 137 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc---hhHHHHHHHHHhcCCCcCcccEE
Confidence 345689999999999999999999999999999999999999999887765431 35699999999999999999999
Q ss_pred EEEeeCC-EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCe
Q 012219 236 GFCLHRK-CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEA 314 (468)
Q Consensus 236 ~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~ 314 (468)
|||.+.+ +.+||||||++|+|.++|+..... .++|.+|++||.++|+||+|||+.+.+.|+||||||+|||+|+++++
T Consensus 138 GyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~a 216 (361)
T KOG1187|consen 138 GYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNA 216 (361)
T ss_pred EEEecCCceEEEEEEccCCCCHHHHhCCCCCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCE
Confidence 9999988 599999999999999999986654 68999999999999999999999888899999999999999999999
Q ss_pred EEeeccccccccCCCCCceec-cccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCccc------ccch--hh
Q 012219 315 FVADFGVARLLNFDSSNRTLL-AGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLS------SSSW--SL 385 (468)
Q Consensus 315 kl~Dfg~~~~~~~~~~~~~~~-~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~------~~~~--~~ 385 (468)
||+|||+|+............ .||.+|+|||+...+..++|+|||||||+++||+||+.|.+... ...| ..
T Consensus 217 KlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~ 296 (361)
T KOG1187|consen 217 KLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPL 296 (361)
T ss_pred EccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHH
Confidence 999999996654312222222 79999999999999999999999999999999999998876432 1122 22
Q ss_pred hcccccccccCCCCCC-ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 386 DKNIKLIDLLDPRLSP-PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 386 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
.......+++|+.+.. ..... +++..+.+++..|++.+|++||+|.+|++.|+...
T Consensus 297 ~~~~~~~eiiD~~l~~~~~~~~--~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 297 LEEGKLREIVDPRLKEGEYPDE--KEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred HHCcchhheeCCCccCCCCChH--HHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 2334788899999873 32211 56666999999999999999999999999996543
No 3
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-50 Score=388.43 Aligned_cols=259 Identities=31% Similarity=0.519 Sum_probs=212.1
Q ss_pred CccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC-EEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK-CMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e 249 (468)
++.+.+.||+|+||+||+|.+++...||||++......... .+.|.+|+.+|.+++|||||+++|+|.++. ..++|||
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtE 120 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDES-RKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTE 120 (362)
T ss_pred HhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHH-HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEE
Confidence 34445669999999999999976666999999876654433 779999999999999999999999999987 7999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-eEecCCCCCceeeCCCC-CeEEeeccccccccC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPP-IVHRDISSNNVLLNSEL-EAFVADFGVARLLNF 327 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~-ivH~dlk~~NIll~~~~-~~kl~Dfg~~~~~~~ 327 (468)
|+++|+|..+++.. ....+++..+++++.|||+|+.||| +.+ ||||||||+|||++.++ ++||+|||+++....
T Consensus 121 y~~~GsL~~~l~~~-~~~~l~~~~~l~~aldiArGm~YLH---~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~ 196 (362)
T KOG0192|consen 121 YMPGGSLSVLLHKK-RKRKLPLKVRLRIALDIARGMEYLH---SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVI 196 (362)
T ss_pred eCCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHh---cCCCeeecccChhhEEEcCCCCEEEECCCccceeecc
Confidence 99999999999874 3445999999999999999999999 566 99999999999999997 999999999988754
Q ss_pred CCCCceecccccccccccccc--CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccch
Q 012219 328 DSSNRTLLAGTYGYIAPELAY--TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQ 405 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~--~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (468)
.....+...||+.|||||++. ...|+.|+|||||||++|||+||+.||........... .......+.+.....
T Consensus 197 ~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~---v~~~~~Rp~~p~~~~- 272 (362)
T KOG0192|consen 197 SKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASA---VVVGGLRPPIPKECP- 272 (362)
T ss_pred ccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHH---HHhcCCCCCCCccCC-
Confidence 334444478999999999999 56999999999999999999999999987764211111 111112222222222
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCC
Q 012219 406 KIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNK 444 (468)
Q Consensus 406 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~ 444 (468)
..+..++.+||+.||+.||++.+++..|..+..
T Consensus 273 ------~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~ 305 (362)
T KOG0192|consen 273 ------PHLSSLMERCWLVDPSRRPSFLEIVSRLESIMS 305 (362)
T ss_pred ------HHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHH
Confidence 226678889999999999999999999986643
No 4
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-50 Score=386.96 Aligned_cols=255 Identities=27% Similarity=0.483 Sum_probs=211.6
Q ss_pred hCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
+.+...+.||+|.||.||.|+++....||+|.++..... .++|.+|+++|++|+|+|||+++|+|..++.++||||
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~----~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE 281 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMS----PEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTE 281 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccccC----hhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEE
Confidence 445667889999999999999988889999999876543 3689999999999999999999999999889999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
||+.|+|.++|+.. ....+...+.+.++.|||+|++||+ ++++|||||.++|||++++..|||+|||+|+....+.
T Consensus 282 ~m~~GsLl~yLr~~-~~~~l~~~~Ll~~a~qIaeGM~YLe---s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~ 357 (468)
T KOG0197|consen 282 YMPKGSLLDYLRTR-EGGLLNLPQLLDFAAQIAEGMAYLE---SKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDE 357 (468)
T ss_pred ecccCcHHHHhhhc-CCCccchHHHHHHHHHHHHHHHHHH---hCCccchhhhhhheeeccCceEEEcccccccccCCCc
Confidence 99999999999873 3345889999999999999999999 8899999999999999999999999999999654333
Q ss_pred CCcee-ccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 330 SNRTL-LAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 330 ~~~~~-~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
+.... ..-+..|.|||.+..+.++.|||||||||+||||+| |+.||..+... ...+.++...+.+.+...
T Consensus 358 Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~--------ev~~~le~GyRlp~P~~C 429 (468)
T KOG0197|consen 358 YTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE--------EVLELLERGYRLPRPEGC 429 (468)
T ss_pred eeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHH--------HHHHHHhccCcCCCCCCC
Confidence 32222 223558999999999999999999999999999999 99998876543 222333333333333322
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
+ ..+.+++..||+.+|++|||++.+...+....
T Consensus 430 P---~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~ 462 (468)
T KOG0197|consen 430 P---DEVYELMKSCWHEDPEDRPTFETLREVLEDFF 462 (468)
T ss_pred C---HHHHHHHHHHhhCCcccCCCHHHHHHHHHHhh
Confidence 2 23778999999999999999998888777653
No 5
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.7e-49 Score=379.63 Aligned_cols=264 Identities=27% Similarity=0.462 Sum_probs=221.5
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
.+|...+.||+|||+.+|.++. ..|..||+|++.+.........+...+|+++.++|+|||||+++++|++.+..|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4688899999999999999976 889999999998866665566778889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
|+|.+++|..+++.. ..+++.++..++.||+.||.||| +.+|+|||||-.|+|++++.++||+|||+|..+..+
T Consensus 98 ELC~~~sL~el~Krr---k~ltEpEary~l~QIv~GlkYLH---~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRR---KPLTEPEARYFLRQIVEGLKYLH---SLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD 171 (592)
T ss_pred EecCCccHHHHHHhc---CCCCcHHHHHHHHHHHHHHHHHH---hcCceecccchhheeecCcCcEEecccceeeeecCc
Confidence 999999999999843 34999999999999999999999 889999999999999999999999999999999888
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
.+.....+|||-|.|||++....++..+||||+||+||-|+.|++||+...- .........-+-.++......
T Consensus 172 ~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~v-----kety~~Ik~~~Y~~P~~ls~~-- 244 (592)
T KOG0575|consen 172 GERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTV-----KETYNKIKLNEYSMPSHLSAE-- 244 (592)
T ss_pred ccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchH-----HHHHHHHHhcCcccccccCHH--
Confidence 8888889999999999999999999999999999999999999999985421 111111111222222222211
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHH-HHHHhcCCCCCCCCc
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPTMQLVS-NEFIARNKAPMQKPF 451 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs~~~v~-~~l~~~~~~~~~~~~ 451 (468)
-.++|.++|+.||.+|||+++|+ +.|+....-|...|.
T Consensus 245 -----A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g~~p~~lp~ 283 (592)
T KOG0575|consen 245 -----AKDLIRKLLRPNPSERPSLDEVLDHPFFKSGFTPARLPS 283 (592)
T ss_pred -----HHHHHHHHhcCCcccCCCHHHHhcCHhhhCCCcCCCCCc
Confidence 34688899999999999999999 445544444444443
No 6
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-49 Score=357.76 Aligned_cols=253 Identities=27% Similarity=0.396 Sum_probs=205.5
Q ss_pred ccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC-EEEEEEE
Q 012219 172 FHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK-CMFLIYE 249 (468)
Q Consensus 172 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e 249 (468)
++..+.||+|..|+||++++ ++++.+|+|++...... ...+++.+|+++++..+||+||.++|.|..+. ...++||
T Consensus 81 le~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~--~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mE 158 (364)
T KOG0581|consen 81 LERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDP--ALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICME 158 (364)
T ss_pred hhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCH--HHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehh
Confidence 44467799999999999976 47889999999554433 34578999999999999999999999999988 5999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
||++|||++.+...+. +++...-+|+.+|++||.|||+ .++||||||||+|||++..|++||+|||.++.+...
T Consensus 159 YMDgGSLd~~~k~~g~---i~E~~L~~ia~~VL~GL~YLh~--~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS- 232 (364)
T KOG0581|consen 159 YMDGGSLDDILKRVGR---IPEPVLGKIARAVLRGLSYLHE--ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS- 232 (364)
T ss_pred hcCCCCHHHHHhhcCC---CCHHHHHHHHHHHHHHHHHHhh--ccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh-
Confidence 9999999999986533 8999999999999999999995 479999999999999999999999999999887533
Q ss_pred CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccc-cchhhhcccccccccCCCCCCccchhHH
Q 012219 330 SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSS-SSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 330 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
.....+||..|||||.+.+..|+.++||||||+.++|+.+|+.||..... ..........+..-..|.++.. .+
T Consensus 233 -~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~---~f- 307 (364)
T KOG0581|consen 233 -IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEG---EF- 307 (364)
T ss_pred -hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcc---cC-
Confidence 55667899999999999999999999999999999999999999875311 0011111111222222333332 11
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
..++..++..||++||.+|||+++++++=
T Consensus 308 --S~ef~~FV~~CL~Kdp~~R~s~~qLl~Hp 336 (364)
T KOG0581|consen 308 --SPEFRSFVSCCLRKDPSERPSAKQLLQHP 336 (364)
T ss_pred --CHHHHHHHHHHhcCCcccCCCHHHHhcCH
Confidence 12277799999999999999999998543
No 7
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-48 Score=353.94 Aligned_cols=203 Identities=30% Similarity=0.499 Sum_probs=181.7
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
..+|.....||+|+||+||+|++ .++..||||.+...... ....+....|+.+|+.++|||||++++++..++..++|
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~-~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV 87 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLN-KKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV 87 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccC-HHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence 45788888899999999999976 46899999999876532 23456788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC------CCeEEeeccc
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSE------LEAFVADFGV 321 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~------~~~kl~Dfg~ 321 (468)
||||.||+|.++++..+. +++.....++.|+|.||++|| +++||||||||+|||++.. -.+||+|||+
T Consensus 88 MEyC~gGDLs~yi~~~~~---l~e~t~r~Fm~QLA~alq~L~---~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGf 161 (429)
T KOG0595|consen 88 MEYCNGGDLSDYIRRRGR---LPEATARHFMQQLASALQFLH---ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGF 161 (429)
T ss_pred EEeCCCCCHHHHHHHcCC---CCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCcceEEeccCCCCCCCceEEecccch
Confidence 999999999999997653 899999999999999999999 8899999999999999875 4579999999
Q ss_pred cccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCccc
Q 012219 322 ARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLS 379 (468)
Q Consensus 322 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~ 379 (468)
|+.+. ........+|++-|||||++..++|+.|+|+||.|+|+||+++|+.||+...
T Consensus 162 AR~L~-~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t 218 (429)
T KOG0595|consen 162 ARFLQ-PGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET 218 (429)
T ss_pred hhhCC-chhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC
Confidence 99987 4455566799999999999999999999999999999999999999998543
No 8
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.7e-49 Score=359.95 Aligned_cols=260 Identities=25% Similarity=0.378 Sum_probs=206.5
Q ss_pred hhCccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhhh----hHHHHHHHHHHHhhccCCceeeEEEEEeeCCE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEELA----SLESFGNEARLLSQIRHRNIVKLYGFCLHRKC 243 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~----~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 243 (468)
.+.|.+.+.||+|+||.|-+|. .++|+.||||.++........ ......+|+++|++|+|||||++.+++..++.
T Consensus 171 ~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds 250 (475)
T KOG0615|consen 171 NDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDS 250 (475)
T ss_pred cceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCc
Confidence 3567888999999999999995 568999999999876543311 22335699999999999999999999999999
Q ss_pred EEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC---CCeEEeecc
Q 012219 244 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSE---LEAFVADFG 320 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~---~~~kl~Dfg 320 (468)
.|||+||++||.|.+.+-.++. +.+..-..++.|++.|+.||| +.||+||||||+|||+..+ ..+||+|||
T Consensus 251 ~YmVlE~v~GGeLfd~vv~nk~---l~ed~~K~~f~Qll~avkYLH---~~GI~HRDiKPeNILl~~~~e~~llKItDFG 324 (475)
T KOG0615|consen 251 SYMVLEYVEGGELFDKVVANKY---LREDLGKLLFKQLLTAVKYLH---SQGIIHRDIKPENILLSNDAEDCLLKITDFG 324 (475)
T ss_pred eEEEEEEecCccHHHHHHhccc---cccchhHHHHHHHHHHHHHHH---HcCcccccCCcceEEeccCCcceEEEecccc
Confidence 9999999999999999976654 666677889999999999999 8899999999999999776 789999999
Q ss_pred ccccccCCCCCceeccccccccccccccCCC---CCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCC
Q 012219 321 VARLLNFDSSNRTLLAGTYGYIAPELAYTMV---VTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDP 397 (468)
Q Consensus 321 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~---~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 397 (468)
+|+..+ ........+||+.|.|||++.+.. +..++|+||+||++|-+++|.+||..........++...- .-
T Consensus 325 lAK~~g-~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G----~y 399 (475)
T KOG0615|consen 325 LAKVSG-EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKG----RY 399 (475)
T ss_pred hhhccc-cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcC----cc
Confidence 999876 566677789999999999998654 3348899999999999999999997543322111110000 01
Q ss_pred CCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHH-HHHHhc
Q 012219 398 RLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVS-NEFIAR 442 (468)
Q Consensus 398 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~-~~l~~~ 442 (468)
.+.++.+..+.+ +..++|.+||..||++|||++|++ +.|.+.
T Consensus 400 ~f~p~~w~~Ise---ea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~ 442 (475)
T KOG0615|consen 400 AFGPLQWDRISE---EALDLINWMLVVDPENRPSADEALNHPWFKD 442 (475)
T ss_pred cccChhhhhhhH---HHHHHHHHhhEeCcccCcCHHHHhcChhhhc
Confidence 112222333333 467899999999999999998888 556653
No 9
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.8e-49 Score=345.57 Aligned_cols=260 Identities=25% Similarity=0.357 Sum_probs=207.3
Q ss_pred hCccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEE-EeeCCE-EEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGF-CLHRKC-MFL 246 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~-~~~~~~-~~l 246 (468)
.+|.+.++||+|.||+||++. ..+|..||.|.++-.... ....++...|+.+|++|+|||||+++++ +.++.. .+|
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md-~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlni 97 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMD-AKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNI 97 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhcc-HHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHH
Confidence 458888999999999999994 679999999999854443 3456788899999999999999999983 344444 899
Q ss_pred EEEeccCCChhhhhhcC-cccCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 247 IYEYMEMGSLFCVLRTD-EEAVGLDWAKRVNVVKGMCHALSYLHHDCTP-PIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~-~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
|||||..|+|..+++.. .....+++..+|+++.|++.||.++|+...+ -|+||||||.||+++.+|.|||+|||+++.
T Consensus 98 vmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 98 VMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 99999999999998653 3345689999999999999999999953222 388999999999999999999999999999
Q ss_pred ccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccc
Q 012219 325 LNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVD 404 (468)
Q Consensus 325 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (468)
+..........+|||.||+||.+.+..|+.||||||+||++|||+.-++||....- ..... ++.+- .+++...
T Consensus 178 l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~--~~L~~--KI~qg---d~~~~p~ 250 (375)
T KOG0591|consen 178 LSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNL--LSLCK--KIEQG---DYPPLPD 250 (375)
T ss_pred hcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccH--HHHHH--HHHcC---CCCCCcH
Confidence 98777777788999999999999999999999999999999999999999986421 11111 11111 1111111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 012219 405 QKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFI 440 (468)
Q Consensus 405 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~ 440 (468)
...+. .+.+|+..|+..||+.||+.-.++..+.
T Consensus 251 ~~YS~---~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 251 EHYST---DLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred HHhhh---HHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 22222 2677899999999999999544444443
No 10
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-46 Score=342.93 Aligned_cols=251 Identities=25% Similarity=0.405 Sum_probs=208.7
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|++.+.||+|+||+||.++. ++++.+|+|++++....+....+....|..++.+++||.||.++-.+++.+.+|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 46799999999999999999964 56899999999988776666778889999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
+||+.||.|..+|+..+. +++..+.-++..|+.||.||| +.+||||||||+|||+|.+|+++|+|||+++..-.
T Consensus 104 ld~~~GGeLf~hL~~eg~---F~E~~arfYlaEi~lAL~~LH---~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~ 177 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREGR---FSEDRARFYLAEIVLALGYLH---SKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK 177 (357)
T ss_pred EeccCCccHHHHHHhcCC---cchhHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence 999999999999986554 888888889999999999999 88999999999999999999999999999997655
Q ss_pred CCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
.+......+||+.|||||++....|+..+|.||+|+++|||++|.+||........... +....+. ..+..+
T Consensus 178 ~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~-------I~~~k~~-~~p~~l 249 (357)
T KOG0598|consen 178 DGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDK-------ILKGKLP-LPPGYL 249 (357)
T ss_pred CCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHH-------HhcCcCC-CCCccC
Confidence 55666668999999999999999999999999999999999999999975443221110 0000100 011111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCC----CHHHHH
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRP----TMQLVS 436 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RP----s~~~v~ 436 (468)
..+ ..+++.+.+..||++|. ++.++.
T Consensus 250 s~~---ardll~~LL~rdp~~RLg~~~d~~~ik 279 (357)
T KOG0598|consen 250 SEE---ARDLLKKLLKRDPRQRLGGPGDAEEIK 279 (357)
T ss_pred CHH---HHHHHHHHhccCHHHhcCCCCChHHhh
Confidence 111 45688899999999996 455554
No 11
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.7e-46 Score=375.41 Aligned_cols=261 Identities=26% Similarity=0.427 Sum_probs=213.0
Q ss_pred hhCccccceeeeeCCceEEEEEcC------CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK 242 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 242 (468)
..+....+.||+|+||+||+|... +...||||.++..... ...++|++|++++..++|||||+++|.|.+++
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~--~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~ 562 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAEN--QARQDFRREAELLAELQHPNIVRLLGVCREGD 562 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccH--HHHHHHHHHHHHHHhccCCCeEEEEEEEccCC
Confidence 455666788999999999999742 4567999999876654 35689999999999999999999999999999
Q ss_pred EEEEEEEeccCCChhhhhhcCcc-----------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEE-----------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSE 311 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~-----------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~ 311 (468)
..++|+|||..|+|.+||+.... ..+++..+.+.||.|||.|+.||- ++.+|||||..+|+|+.++
T Consensus 563 P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs---~~~FVHRDLATRNCLVge~ 639 (774)
T KOG1026|consen 563 PLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS---SHHFVHRDLATRNCLVGEN 639 (774)
T ss_pred eeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCcccccchhhhhceeccc
Confidence 99999999999999999975321 234889999999999999999999 7789999999999999999
Q ss_pred CCeEEeeccccccccCCCCCce--eccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcc
Q 012219 312 LEAFVADFGVARLLNFDSSNRT--LLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKN 388 (468)
Q Consensus 312 ~~~kl~Dfg~~~~~~~~~~~~~--~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~ 388 (468)
..|||+|||+++.+....+... ...-..+|||||.+..+++|++||||||||+|||+++ |+.||...........-
T Consensus 640 l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i- 718 (774)
T KOG1026|consen 640 LVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECI- 718 (774)
T ss_pred eEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHH-
Confidence 9999999999998754333221 1233569999999999999999999999999999999 99999876653322111
Q ss_pred cccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 389 IKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
+ +..+ -+. .+.+..++++|+..||+..|++||++.||-..|+....+
T Consensus 719 -~-----~g~l-L~~---Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~ 765 (774)
T KOG1026|consen 719 -R-----AGQL-LSC---PENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQA 765 (774)
T ss_pred -H-----cCCc-ccC---CCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhc
Confidence 0 1111 111 113334488899999999999999999999999887654
No 12
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=9.1e-47 Score=333.87 Aligned_cols=261 Identities=25% Similarity=0.362 Sum_probs=205.4
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
+.|+....+|+|+||+||+++.+ +|+.||||++...... ....+-.++|++++++++|+|+|.++++|...+..+||+
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd-~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVF 80 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDD-PVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVF 80 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCcc-HHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEe
Confidence 35777788999999999999865 6999999999765432 233455679999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
|||+. ++.+-|..... .++...+.+++.|++.|+.|+| +.+++||||||+|||++.++.+||+|||+|+.+..+
T Consensus 81 E~~dh-TvL~eLe~~p~--G~~~~~vk~~l~Q~l~ai~~cH---k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p 154 (396)
T KOG0593|consen 81 EYCDH-TVLHELERYPN--GVPSELVKKYLYQLLKAIHFCH---KNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAP 154 (396)
T ss_pred eecch-HHHHHHHhccC--CCCHHHHHHHHHHHHHHhhhhh---hcCeecccCChhheEEecCCcEEeccchhhHhhcCC
Confidence 99987 44444544433 3888999999999999999999 789999999999999999999999999999999877
Q ss_pred CCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhh-----------------hcccc
Q 012219 329 SSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSL-----------------DKNIK 390 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~-----------------~~~~~ 390 (468)
....+..+.|.+|+|||.+.+ .+|+..+||||+||++.||++|.+-|...+...... .....
T Consensus 155 gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~ 234 (396)
T KOG0593|consen 155 GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPF 234 (396)
T ss_pred cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCc
Confidence 777888899999999999887 689999999999999999999999886544321110 00000
Q ss_pred ccc--ccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 391 LID--LLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 391 ~~~--~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
... +.++.-..+...........+.+++..|++.||.+|++.+++++
T Consensus 235 F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 235 FHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred eeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 001 11111111111112222234789999999999999999999884
No 13
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-46 Score=369.32 Aligned_cols=273 Identities=30% Similarity=0.469 Sum_probs=223.8
Q ss_pred CCCCcCHHHHHHHhhC---------ccccceeeeeCCceEEEEEcC----CCCEEEEEEecCcchhhhhhHHHHHHHHHH
Q 012219 156 YDGRITFQDMIEATED---------FHIKYCIGTGGYGSVYRARLP----SGKVVALKKLHRSETEELASLESFGNEARL 222 (468)
Q Consensus 156 ~~~~~~~~~~~~~~~~---------~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~ 222 (468)
+...++|+|...+... ..+.+.||.|.||.||+|+++ ....||||.++....+ .+..+|+.|+.+
T Consensus 606 YiDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gyte--kqrrdFL~EAsI 683 (996)
T KOG0196|consen 606 YIDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTE--KQRRDFLSEASI 683 (996)
T ss_pred ecCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccH--HHHhhhhhhhhh
Confidence 4445667665555443 466789999999999999864 2457999999987665 356899999999
Q ss_pred HhhccCCceeeEEEEEeeCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCC
Q 012219 223 LSQIRHRNIVKLYGFCLHRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDIS 302 (468)
Q Consensus 223 l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk 302 (468)
|.++.||||++|-|+....+..+||+|||++|+|+.||+.+... +.+.+...++.+||.|+.||- +.++|||||.
T Consensus 684 MGQFdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~DGq--ftviQLVgMLrGIAsGMkYLs---dm~YVHRDLA 758 (996)
T KOG0196|consen 684 MGQFDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQNDGQ--FTVIQLVGMLRGIASGMKYLS---DMNYVHRDLA 758 (996)
T ss_pred cccCCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcCCc--eEeehHHHHHHHHHHHhHHHh---hcCchhhhhh
Confidence 99999999999999999999999999999999999999987643 999999999999999999999 8899999999
Q ss_pred CCceeeCCCCCeEEeeccccccccCCCCCce-eccc--cccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcc
Q 012219 303 SNNVLLNSELEAFVADFGVARLLNFDSSNRT-LLAG--TYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELL 378 (468)
Q Consensus 303 ~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~-~~~g--~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~ 378 (468)
++|||++.+..+|++|||+++.+..+..... ...| ..+|.|||.+...+++.+||||||||+|||.++ |..||-++
T Consensus 759 ARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdm 838 (996)
T KOG0196|consen 759 ARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 838 (996)
T ss_pred hhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCccccc
Confidence 9999999999999999999998865543322 2223 458999999999999999999999999999998 99998776
Q ss_pred cccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCCC
Q 012219 379 SSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKAP 446 (468)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~~ 446 (468)
........ +. .+-+++++. ++...|.+|++.||++|-.+||.+.+++..|.+....|
T Consensus 839 SNQdVIka----Ie--~gyRLPpPm-----DCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP 895 (996)
T KOG0196|consen 839 SNQDVIKA----IE--QGYRLPPPM-----DCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNP 895 (996)
T ss_pred chHHHHHH----HH--hccCCCCCC-----CCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCc
Confidence 54322111 00 122333332 23344889999999999999999999999998876554
No 14
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-45 Score=337.23 Aligned_cols=267 Identities=26% Similarity=0.381 Sum_probs=212.9
Q ss_pred hhCccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|++.+.||.|..++||+|+ .+.+..||||++..++... .++.+.+|+..|+.++||||++++..|..++.+|+|
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~--~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvV 102 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNN--DLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVV 102 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhh--hHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEe
Confidence 4679999999999999999996 5678999999999887764 378899999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|.||.+||+.+.+...... .+++..+..|++++++||.||| ..|.||||+|+.|||++.+|.|||+|||.+..+..
T Consensus 103 mpfMa~GS~ldIik~~~~~-Gl~E~~Ia~iLre~LkaL~YLH---~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~ 178 (516)
T KOG0582|consen 103 MPFMAGGSLLDIIKTYYPD-GLEEASIATILREVLKALDYLH---QNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFD 178 (516)
T ss_pred ehhhcCCcHHHHHHHHccc-cccHHHHHHHHHHHHHHHHHHH---hcCceecccccccEEEcCCCcEEEcCceeeeeecc
Confidence 9999999999999875543 3899999999999999999999 77999999999999999999999999998766643
Q ss_pred CCCCc----eeccccccccccccccC--CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 328 DSSNR----TLLAGTYGYIAPELAYT--MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 328 ~~~~~----~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
.+... ...+||++|||||++.. ..|+.|+|||||||...||.+|..||..++........-.......+ ...
T Consensus 179 ~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~--t~~ 256 (516)
T KOG0582|consen 179 SGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLL--TSG 256 (516)
T ss_pred cCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcc--ccc
Confidence 33222 34589999999999654 47999999999999999999999999877654332221111111000 000
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH-HHHhcC
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN-EFIARN 443 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~-~l~~~~ 443 (468)
.........-..+.+++..|++.||.+|||++++++ .|++..
T Consensus 257 ~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~ 299 (516)
T KOG0582|consen 257 LDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKA 299 (516)
T ss_pred CChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhc
Confidence 001111112235788999999999999999999884 444443
No 15
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-45 Score=345.51 Aligned_cols=256 Identities=25% Similarity=0.391 Sum_probs=212.7
Q ss_pred HHhhCccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEE
Q 012219 167 EATEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCM 244 (468)
Q Consensus 167 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 244 (468)
+...+|.+++.||+|+|++|++|+ ...++.+|||++.+.-.-.....+....|-+.|.+| .||.|++|+-.|.+...+
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sL 149 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESL 149 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccce
Confidence 345789999999999999999996 457899999999876554444556677899999999 899999999999999999
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
|.|+||+++|+|.++++..+. +++.-...++.+|+.||+||| +.|||||||||+|||+|.|+++||+|||.|+.
T Consensus 150 YFvLe~A~nGdll~~i~K~Gs---fde~caR~YAAeIldAleylH---~~GIIHRDlKPENILLd~dmhikITDFGsAK~ 223 (604)
T KOG0592|consen 150 YFVLEYAPNGDLLDLIKKYGS---FDETCARFYAAEILDALEYLH---SNGIIHRDLKPENILLDKDGHIKITDFGSAKI 223 (604)
T ss_pred EEEEEecCCCcHHHHHHHhCc---chHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeEcCCCcEEEeecccccc
Confidence 999999999999999987654 899999999999999999999 88999999999999999999999999999998
Q ss_pred ccCCCCC-------------ceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccccc
Q 012219 325 LNFDSSN-------------RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKL 391 (468)
Q Consensus 325 ~~~~~~~-------------~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~ 391 (468)
+...... ...++||..|.+||++.....+..+|+|+||||+|+|+.|++||.....-.. +.+.
T Consensus 224 l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyli-FqkI--- 299 (604)
T KOG0592|consen 224 LSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLI-FQKI--- 299 (604)
T ss_pred CChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHH-HHHH---
Confidence 8532111 1457899999999999999999999999999999999999999986442111 1111
Q ss_pred ccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 012219 392 IDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFI 440 (468)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~ 440 (468)
-.++-.+.+.++.. ..+|+.+.|..||.+|+|.+++.++-+
T Consensus 300 -~~l~y~fp~~fp~~-------a~dLv~KLLv~dp~~Rlt~~qIk~HpF 340 (604)
T KOG0592|consen 300 -QALDYEFPEGFPED-------ARDLIKKLLVRDPSDRLTSQQIKAHPF 340 (604)
T ss_pred -HHhcccCCCCCCHH-------HHHHHHHHHccCccccccHHHHhhCcc
Confidence 11233344433322 456888999999999999999986643
No 16
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-45 Score=351.97 Aligned_cols=269 Identities=25% Similarity=0.438 Sum_probs=216.4
Q ss_pred CcCHHHHHHHhhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEE
Q 012219 159 RITFQDMIEATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFC 238 (468)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~ 238 (468)
+.+.++|....+++.+.+.||+|.||+||+|++.+ .||||++.-..... ...+.|.+|+..+++-+|.||+-+.|||
T Consensus 381 s~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~-~qlqaFKnEVa~lkkTRH~NIlLFMG~~ 457 (678)
T KOG0193|consen 381 SDSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTP-EQLQAFKNEVAVLKKTRHENILLFMGAC 457 (678)
T ss_pred CccccccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCH-HHHHHHHHHHHHHhhcchhhheeeehhh
Confidence 34456777777888889999999999999999853 59999998776654 3789999999999999999999999999
Q ss_pred eeCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEee
Q 012219 239 LHRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVAD 318 (468)
Q Consensus 239 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 318 (468)
..+.. .||+.+|+|.+|+.+++..+. .++..+.+.||.|||+|+.||| .++|||||||..||++.++++|||+|
T Consensus 458 ~~p~~-AIiTqwCeGsSLY~hlHv~et--kfdm~~~idIAqQiaqGM~YLH---AK~IIHrDLKSnNIFl~~~~kVkIgD 531 (678)
T KOG0193|consen 458 MNPPL-AIITQWCEGSSLYTHLHVQET--KFDMNTTIDIAQQIAQGMDYLH---AKNIIHRDLKSNNIFLHEDLKVKIGD 531 (678)
T ss_pred cCCce-eeeehhccCchhhhhccchhh--hhhHHHHHHHHHHHHHhhhhhh---hhhhhhhhccccceEEccCCcEEEec
Confidence 98887 999999999999999997664 4889999999999999999999 99999999999999999999999999
Q ss_pred ccccccccC--CCCCceeccccccccccccccC---CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccccccc
Q 012219 319 FGVARLLNF--DSSNRTLLAGTYGYIAPELAYT---MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLID 393 (468)
Q Consensus 319 fg~~~~~~~--~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~ 393 (468)
||++..... .........|...|||||+++. ..|+..+|||||||++|||+||..||. ...... +.-
T Consensus 532 FGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys-i~~~dq-------Iif 603 (678)
T KOG0193|consen 532 FGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS-IQNRDQ-------IIF 603 (678)
T ss_pred ccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC-CCChhh-------eEE
Confidence 999865432 1222334568889999999874 479999999999999999999999998 322111 111
Q ss_pred ccCCC-CCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCC
Q 012219 394 LLDPR-LSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNK 444 (468)
Q Consensus 394 ~~~~~-~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~ 444 (468)
++... +.+........+...+.+|+..||..++++||.+.+++..|+...+
T Consensus 604 mVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 604 MVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLP 655 (678)
T ss_pred EecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhh
Confidence 11111 1111111122333447788999999999999999999998877655
No 17
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-45 Score=353.70 Aligned_cols=273 Identities=26% Similarity=0.415 Sum_probs=215.9
Q ss_pred CHHHHHHHhhCccccceeeeeCCceEEEEEcC--CC--CE-EEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEE
Q 012219 161 TFQDMIEATEDFHIKYCIGTGGYGSVYRARLP--SG--KV-VALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLY 235 (468)
Q Consensus 161 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~--~~--~~-vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 235 (468)
.-+.|+...++..+.++||+|+||.||+|++. ++ .. ||||..+..........++|++|+++|++++|||||+++
T Consensus 148 ~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~y 227 (474)
T KOG0194|consen 148 PRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFY 227 (474)
T ss_pred cccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEE
Confidence 34455556677778899999999999999753 23 23 899999874444446788999999999999999999999
Q ss_pred EEEeeCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeE
Q 012219 236 GFCLHRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAF 315 (468)
Q Consensus 236 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~k 315 (468)
|++.....+++|||+|.||+|.++|+..+. .++..+++.++.+.|.||+||| +.+++||||.++|+|++.++.+|
T Consensus 228 GVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~--~v~~~ek~~~~~~AA~Gl~YLh---~k~~IHRDIAARNcL~~~~~~vK 302 (474)
T KOG0194|consen 228 GVAVLEEPLMLVMELCNGGSLDDYLKKNKK--SLPTLEKLRFCYDAARGLEYLH---SKNCIHRDIAARNCLYSKKGVVK 302 (474)
T ss_pred EEEcCCCccEEEEEecCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHhHHHHHH---HCCCcchhHhHHHheecCCCeEE
Confidence 999999999999999999999999998765 4899999999999999999999 88999999999999999999999
Q ss_pred EeeccccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccc
Q 012219 316 VADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDL 394 (468)
Q Consensus 316 l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 394 (468)
|+|||+++.-..-........-+.+|+|||.+....++.++|||||||++||+++ |..||.......... . +
T Consensus 303 ISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~----k---I 375 (474)
T KOG0194|consen 303 ISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKA----K---I 375 (474)
T ss_pred eCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHH----H---H
Confidence 9999998764311111111123568999999999999999999999999999999 899998765431111 1 1
Q ss_pred cCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCCCCC
Q 012219 395 LDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKAPMQ 448 (468)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~~~~ 448 (468)
.....+...+..... .+..++.+||..+|++||+|.++.+.+.........
T Consensus 376 ~~~~~r~~~~~~~p~---~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 376 VKNGYRMPIPSKTPK---ELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred HhcCccCCCCCCCHH---HHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence 011111111111112 255677899999999999999999999888765443
No 18
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-44 Score=334.64 Aligned_cols=258 Identities=27% Similarity=0.436 Sum_probs=203.2
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC--EEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK--CMFL 246 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~l 246 (468)
.++...+.||+|+||+||++... +|...|||......... .+.+.+|+.+|.+++|||||+++|...... .+++
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~---~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i 93 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT---SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNI 93 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchh---HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEe
Confidence 34667788999999999999754 58999999998764332 567889999999999999999999855444 6899
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC-CCCeEEeeccccccc
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS-ELEAFVADFGVARLL 325 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~-~~~~kl~Dfg~~~~~ 325 (468)
.|||+++|+|.+++...+. .+++..+..++.||++||+||| ++||+||||||+|||++. ++.+||+|||+++..
T Consensus 94 ~mEy~~~GsL~~~~~~~g~--~l~E~~v~~ytr~iL~GL~ylH---s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~ 168 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKRYGG--KLPEPLVRRYTRQILEGLAYLH---SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKL 168 (313)
T ss_pred eeeccCCCcHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHH---hCCEeccCcccceEEEeCCCCeEEeccCcccccc
Confidence 9999999999999987664 4999999999999999999999 889999999999999999 799999999999876
Q ss_pred cC---CCCCceeccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCCcc-cccchhhhcccccccccCCCCC
Q 012219 326 NF---DSSNRTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGELL-SSSSWSLDKNIKLIDLLDPRLS 400 (468)
Q Consensus 326 ~~---~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~ 400 (468)
.. .........||+.|||||++..+ ....++||||+||++.||+||+.||... ....+..... . +..-|.++
T Consensus 169 ~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig-~--~~~~P~ip 245 (313)
T KOG0198|consen 169 ESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIG-R--EDSLPEIP 245 (313)
T ss_pred ccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHh-c--cCCCCCCC
Confidence 53 11223346899999999999864 3345999999999999999999998763 2111111100 0 00112222
Q ss_pred CccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 401 PPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 401 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
...+ ++ ..+++.+|+..||++|||+++++++.+.....
T Consensus 246 ~~ls----~~---a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~ 283 (313)
T KOG0198|consen 246 DSLS----DE---AKDFLRKCFKRDPEKRPTAEELLEHPFLKQNS 283 (313)
T ss_pred cccC----HH---HHHHHHHHhhcCcccCcCHHHHhhChhhhccc
Confidence 2222 22 45688899999999999999999887765443
No 19
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.4e-43 Score=345.09 Aligned_cols=260 Identities=25% Similarity=0.387 Sum_probs=201.6
Q ss_pred hhCccccceeeeeCCceEEEEEc------CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeC
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL------PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHR 241 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 241 (468)
.++|.+.+.||+|+||.||+|.. .+++.||||++...... ...+.+.+|++++..+ +||||++++++|...
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATA--SEHKALMSELKILIHIGNHLNVVNLLGACTKP 83 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccch--HHHHHHHHHHHHHHHhccCcceeeEEeEecCC
Confidence 46799999999999999999963 23568999999754332 2346788999999999 899999999998764
Q ss_pred -CEEEEEEEeccCCChhhhhhcCcc-------------------------------------------------------
Q 012219 242 -KCMFLIYEYMEMGSLFCVLRTDEE------------------------------------------------------- 265 (468)
Q Consensus 242 -~~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------------- 265 (468)
...+++|||+++|+|.+++.....
T Consensus 84 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (338)
T cd05102 84 NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQET 163 (338)
T ss_pred CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhc
Confidence 458899999999999999875321
Q ss_pred ----cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCC--Cceeccccc
Q 012219 266 ----AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSS--NRTLLAGTY 339 (468)
Q Consensus 266 ----~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~ 339 (468)
...+++.++..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++....... ......++.
T Consensus 164 ~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~ 240 (338)
T cd05102 164 DDLWKSPLTMEDLICYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPL 240 (338)
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCc
Confidence 124778889999999999999999 78999999999999999999999999999986532211 112234567
Q ss_pred cccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHH
Q 012219 340 GYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVA 418 (468)
Q Consensus 340 ~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 418 (468)
.|+|||++.+..++.++|||||||++|||++ |+.||............ .............. ..+.+++
T Consensus 241 ~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~~-------~~l~~li 310 (338)
T cd05102 241 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQR---LKDGTRMRAPENAT-------PEIYRIM 310 (338)
T ss_pred cccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHH---HhcCCCCCCCCCCC-------HHHHHHH
Confidence 8999999999999999999999999999997 99998764322111110 00000111111111 2267899
Q ss_pred HhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 419 FSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 419 ~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
.+||+.||++|||+.++++.|++..
T Consensus 311 ~~cl~~dp~~RPs~~el~~~l~~~~ 335 (338)
T cd05102 311 LACWQGDPKERPTFSALVEILGDLL 335 (338)
T ss_pred HHHccCChhhCcCHHHHHHHHHHHH
Confidence 9999999999999999999998753
No 20
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-44 Score=342.00 Aligned_cols=251 Identities=25% Similarity=0.368 Sum_probs=209.3
Q ss_pred hCccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
..|....+||+|+.|.||.++ ..+++.||||++....... .+-..+|+.+|+..+|+|||.+++.|...+..++||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~---keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVM 349 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPK---KELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVM 349 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCc---hhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEE
Confidence 457777889999999999995 5678999999998765442 345779999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
|||++|+|.+.+.... +++.++..|+.++++||+||| ..+|+|||||.+|||++.++.+||+|||+|..+...
T Consensus 350 Eym~ggsLTDvVt~~~----~~E~qIA~Icre~l~aL~fLH---~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~ 422 (550)
T KOG0578|consen 350 EYMEGGSLTDVVTKTR----MTEGQIAAICREILQGLKFLH---ARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEE 422 (550)
T ss_pred eecCCCchhhhhhccc----ccHHHHHHHHHHHHHHHHHHH---hcceeeeccccceeEeccCCcEEEeeeeeeeccccc
Confidence 9999999999987543 899999999999999999999 889999999999999999999999999999998877
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
.......+||+.|||||+.....|++|+||||||++++||+-|.+||-....... ...+...-.|.+....
T Consensus 423 ~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrA----lyLIa~ng~P~lk~~~----- 493 (550)
T KOG0578|consen 423 QSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA----LYLIATNGTPKLKNPE----- 493 (550)
T ss_pred cCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHH----HHHHhhcCCCCcCCcc-----
Confidence 7677788999999999999999999999999999999999999999864222111 1111111222222211
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
.-...+.+++.+||+.||++||++.|++++=
T Consensus 494 klS~~~kdFL~~cL~~dv~~RasA~eLL~Hp 524 (550)
T KOG0578|consen 494 KLSPELKDFLDRCLVVDVEQRASAKELLEHP 524 (550)
T ss_pred ccCHHHHHHHHHHhhcchhcCCCHHHHhcCh
Confidence 1112377889999999999999999999543
No 21
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.5e-43 Score=308.38 Aligned_cols=276 Identities=25% Similarity=0.363 Sum_probs=212.3
Q ss_pred hCccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|...+.+|+|.||.||+|+ ..+|+.||||+++.....+.-. ....+|++.|+.++|+||+.+++++...+...||+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~-~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVf 80 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGIN-RTALREIKLLQELKHPNIIELIDVFPHKSNLSLVF 80 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCcc-HHHHHHHHHHHHccCcchhhhhhhccCCCceEEEE
Confidence 457778899999999999996 5689999999998776554332 35669999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
|||+. +|...++... ..++..++..++.++.+|++||| .+.|+||||||.|+|++.+|.+||+|||+|+.+...
T Consensus 81 Efm~t-dLe~vIkd~~--i~l~pa~iK~y~~m~LkGl~y~H---~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p 154 (318)
T KOG0659|consen 81 EFMPT-DLEVVIKDKN--IILSPADIKSYMLMTLKGLAYCH---SKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSP 154 (318)
T ss_pred Eeccc-cHHHHhcccc--cccCHHHHHHHHHHHHHHHHHHH---hhhhhcccCCccceEEcCCCcEEeecccchhccCCC
Confidence 99974 8988887543 45889999999999999999999 889999999999999999999999999999999877
Q ss_pred CCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCccccc----------------chhh----hc
Q 012219 329 SSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSS----------------SWSL----DK 387 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~----------------~~~~----~~ 387 (468)
.......+-|..|+|||.+.+ ..|+..+||||.|||+.||+-|.+-|....+. .|.. ..
T Consensus 155 ~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpd 234 (318)
T KOG0659|consen 155 NRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPD 234 (318)
T ss_pred CcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcccccccc
Confidence 666666688999999998876 57999999999999999999998766543321 1110 00
Q ss_pred ccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH-HHHhcCCCCCCCCcccccHhh
Q 012219 388 NIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN-EFIARNKAPMQKPFHEISILE 458 (468)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~-~l~~~~~~~~~~~~~~~~~~~ 458 (468)
.........+.... .+........+++.+++..||.+|++++|+++ ..+.. .|.+.+-.+++...
T Consensus 235 Y~~~~~~P~~~~~~----lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~--~P~pt~~~~lp~p~ 300 (318)
T KOG0659|consen 235 YVKIQQFPKPPLNN----LFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKS--LPLPTPPSKLPIPS 300 (318)
T ss_pred HHHHhcCCCCcccc----ccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhc--CCCCCChhhCcCCc
Confidence 00111111111111 11112223578999999999999999988874 44443 34444444554443
No 22
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.8e-43 Score=332.94 Aligned_cols=265 Identities=27% Similarity=0.373 Sum_probs=205.5
Q ss_pred hhCccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC--CEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR--KCMF 245 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 245 (468)
.+.|+..++||+|.||.||+|+ ..+|+.||+|++..+...+ .......+||.+|++|+||||+++.+...+. ..+|
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~-~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siY 194 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKE-GFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIY 194 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCC-cchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEE
Confidence 3567778889999999999996 5789999999998766433 2345567999999999999999999998876 6899
Q ss_pred EEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccc
Q 012219 246 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLL 325 (468)
Q Consensus 246 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 325 (468)
||+|||+. +|.-++.... ..++..++..++.|++.||+||| ++||.|||||.+|||+|.+|.+||+|||+|+++
T Consensus 195 lVFeYMdh-DL~GLl~~p~--vkft~~qIKc~mkQLl~Gl~~cH---~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y 268 (560)
T KOG0600|consen 195 LVFEYMDH-DLSGLLSSPG--VKFTEPQIKCYMKQLLEGLEYCH---SRGVLHRDIKGSNILIDNNGVLKIADFGLARFY 268 (560)
T ss_pred EEEecccc-hhhhhhcCCC--cccChHHHHHHHHHHHHHHHHHh---hcCeeeccccccceEEcCCCCEEeccccceeec
Confidence 99999986 8888887543 45899999999999999999999 899999999999999999999999999999988
Q ss_pred cCCCCC-ceeccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCCcccccchhh-----------hccc--c
Q 012219 326 NFDSSN-RTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSL-----------DKNI--K 390 (468)
Q Consensus 326 ~~~~~~-~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~-----------~~~~--~ 390 (468)
...... .+..+-|.+|+|||++.+. .|+.++|+||.||||.||++|++.|.........- ..+. +
T Consensus 269 ~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~k 348 (560)
T KOG0600|consen 269 TPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSK 348 (560)
T ss_pred cCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhcccccc
Confidence 655433 6667889999999988764 79999999999999999999999987543321100 0000 1
Q ss_pred cccccCCCCCCccchhHHHHH----HHHHHHHHhcccCCCCCCCCHHHHH-HHHH
Q 012219 391 LIDLLDPRLSPPVDQKIRQDI----ILVSTVAFSCLRSQPKSRPTMQLVS-NEFI 440 (468)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~----~~l~~l~~~cl~~dP~~RPs~~~v~-~~l~ 440 (468)
+..........+....+.+.. ...++|+..+|..||.+|.|+.+++ ..++
T Consensus 349 LP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF 403 (560)
T KOG0600|consen 349 LPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYF 403 (560)
T ss_pred CCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCccc
Confidence 110000011111122222221 2367888999999999999997777 4555
No 23
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-43 Score=367.20 Aligned_cols=264 Identities=29% Similarity=0.454 Sum_probs=210.9
Q ss_pred hCccccceeeeeCCceEEEEEcCC--CC----EEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPS--GK----VVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKC 243 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~--~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 243 (468)
...+....||+|+||.||.|...+ |. .||||.+.+.... ....+|.+|..+|+.++|||||+++|+|.+...
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~--~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~ 769 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSE--QEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGP 769 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCH--HHHHHHHHHHHHHhcCCCcceeeEEEeecCCCC
Confidence 456667889999999999997532 33 4899999876543 456899999999999999999999999999999
Q ss_pred EEEEEEeccCCChhhhhhcCc----ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeec
Q 012219 244 MFLIYEYMEMGSLFCVLRTDE----EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADF 319 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 319 (468)
.+|++|||++|+|..+|+... ....+...+.+.++.|||+|+.||+ +.++|||||.++|+|++....|||+||
T Consensus 770 ~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe---~~~fvHRDLAaRNCLL~~~r~VKIaDF 846 (1025)
T KOG1095|consen 770 PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE---SKHFVHRDLAARNCLLDERRVVKIADF 846 (1025)
T ss_pred cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH---hCCCcCcchhhhheeecccCcEEEccc
Confidence 999999999999999998752 2345889999999999999999999 889999999999999999999999999
Q ss_pred cccccccCCCCCcee-c-cccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccC
Q 012219 320 GVARLLNFDSSNRTL-L-AGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLD 396 (468)
Q Consensus 320 g~~~~~~~~~~~~~~-~-~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 396 (468)
|+|+.+....+.... . .-..+|||||.+..+.++.|+|||||||++||++| |..||............. -+
T Consensus 847 GlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~------~g 920 (1025)
T KOG1095|consen 847 GLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVL------EG 920 (1025)
T ss_pred chhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHH------hC
Confidence 999965433332221 1 23468999999999999999999999999999999 999998665432221100 01
Q ss_pred CCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCCCCCC
Q 012219 397 PRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKAPMQK 449 (468)
Q Consensus 397 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~~~~~ 449 (468)
-++.++. .+...+++++..||+.+|++||++..+++.+..+....-..
T Consensus 921 gRL~~P~-----~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~~ 968 (1025)
T KOG1095|consen 921 GRLDPPS-----YCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALGT 968 (1025)
T ss_pred CccCCCC-----CCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhccC
Confidence 1222221 11223778999999999999999999999887766543333
No 24
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=9.7e-43 Score=330.24 Aligned_cols=248 Identities=20% Similarity=0.281 Sum_probs=199.0
Q ss_pred ceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee----CCEEEEEEEec
Q 012219 176 YCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH----RKCMFLIYEYM 251 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~ 251 (468)
..||+|++|.||+|.+ +|+.||||++...........+.|.+|++++.+++||||++++|++.+ ....++||||+
T Consensus 26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~ 104 (283)
T PHA02988 26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC 104 (283)
T ss_pred eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence 5799999999999988 688999999987654443446788899999999999999999999877 34689999999
Q ss_pred cCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCC
Q 012219 252 EMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSN 331 (468)
Q Consensus 252 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 331 (468)
++|+|.+++.... .+++...+.++.+++.||.|||. ..+++||||||+||+++.++.+||+|||+++.....
T Consensus 105 ~~g~L~~~l~~~~---~~~~~~~~~i~~~i~~~l~~lH~--~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~--- 176 (283)
T PHA02988 105 TRGYLREVLDKEK---DLSFKTKLDMAIDCCKGLYNLYK--YTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP--- 176 (283)
T ss_pred CCCcHHHHHhhCC---CCChhHHHHHHHHHHHHHHHHHh--cCCCCCCcCChhhEEECCCCcEEEcccchHhhhccc---
Confidence 9999999997643 38899999999999999999993 247889999999999999999999999999865422
Q ss_pred ceeccccccccccccccC--CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHH
Q 012219 332 RTLLAGTYGYIAPELAYT--MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQ 409 (468)
Q Consensus 332 ~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (468)
.....|+..|+|||++.+ ..++.++|||||||++|||++|+.||............ ......+......+
T Consensus 177 ~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i---~~~~~~~~~~~~~~----- 248 (283)
T PHA02988 177 PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLI---INKNNSLKLPLDCP----- 248 (283)
T ss_pred cccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHH---HhcCCCCCCCCcCc-----
Confidence 123457889999999876 68999999999999999999999999865322111100 00001111111111
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 410 DIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 410 ~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
..+.+++.+||+.||++|||++++++.|...
T Consensus 249 --~~l~~li~~cl~~dp~~Rps~~ell~~l~~~ 279 (283)
T PHA02988 249 --LEIKCIVEACTSHDSIKRPNIKEILYNLSLY 279 (283)
T ss_pred --HHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence 1367899999999999999999999998764
No 25
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=2e-44 Score=342.60 Aligned_cols=251 Identities=28% Similarity=0.499 Sum_probs=205.2
Q ss_pred CCcCHHHHHHHhhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEE
Q 012219 158 GRITFQDMIEATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGF 237 (468)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~ 237 (468)
..+.|+++.+ .+-||.|+.|.||.|++ .++.||||+++.-+. .+|+-|++|+|+||+.+.|+
T Consensus 119 WeiPFe~IsE-------LeWlGSGaQGAVF~Grl-~netVAVKKV~elkE----------TdIKHLRkLkH~NII~FkGV 180 (904)
T KOG4721|consen 119 WEIPFEEISE-------LEWLGSGAQGAVFLGRL-HNETVAVKKVRELKE----------TDIKHLRKLKHPNIITFKGV 180 (904)
T ss_pred ccCCHHHhhh-------hhhhccCcccceeeeec-cCceehhHHHhhhhh----------hhHHHHHhccCcceeeEeee
Confidence 4566766544 45599999999999999 468899998864322 57889999999999999999
Q ss_pred EeeCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEe
Q 012219 238 CLHRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVA 317 (468)
Q Consensus 238 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~ 317 (468)
|.....+|||||||..|-|...|+.... +.......+..+||.|+.||| .+.|||||||.-|||++.+..|||+
T Consensus 181 CtqsPcyCIiMEfCa~GqL~~VLka~~~---itp~llv~Wsk~IA~GM~YLH---~hKIIHRDLKSPNiLIs~~d~VKIs 254 (904)
T KOG4721|consen 181 CTQSPCYCIIMEFCAQGQLYEVLKAGRP---ITPSLLVDWSKGIAGGMNYLH---LHKIIHRDLKSPNILISYDDVVKIS 254 (904)
T ss_pred ecCCceeEEeeeccccccHHHHHhccCc---cCHHHHHHHHHHhhhhhHHHH---HhhHhhhccCCCceEeeccceEEec
Confidence 9999999999999999999999986543 777888899999999999999 6799999999999999999999999
Q ss_pred eccccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCC
Q 012219 318 DFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDP 397 (468)
Q Consensus 318 Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 397 (468)
|||-++..... .....++||..|||||++.....++|+|||||||+||||+||..||.+............+...+
T Consensus 255 DFGTS~e~~~~-STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~L--- 330 (904)
T KOG4721|consen 255 DFGTSKELSDK-STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHL--- 330 (904)
T ss_pred cccchHhhhhh-hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccc---
Confidence 99999877533 55556899999999999999999999999999999999999999998766542221111111111
Q ss_pred CCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 398 RLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 398 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
.++...+.+ +.-|++.||+..|..||++++++.+|.-..
T Consensus 331 pvPstcP~G-------fklL~Kqcw~sKpRNRPSFrqil~HldIa~ 369 (904)
T KOG4721|consen 331 PVPSTCPDG-------FKLLLKQCWNSKPRNRPSFRQILLHLDIAS 369 (904)
T ss_pred cCcccCchH-------HHHHHHHHHhcCCCCCccHHHHHHHHhhcC
Confidence 112222222 334778999999999999999999997543
No 26
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-43 Score=337.64 Aligned_cols=258 Identities=22% Similarity=0.348 Sum_probs=206.8
Q ss_pred HhhCccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchh-h-hhhHHHHHHHHHHHhhcc-CCceeeEEEEEeeCCE
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETE-E-LASLESFGNEARLLSQIR-HRNIVKLYGFCLHRKC 243 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-~-~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~ 243 (468)
..+.|.+.+.||+|+||+|+.|. ..++..||+|++.+.... . ....+...+|+.++++++ ||||+++++++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 34689999999999999999995 457899999977764221 1 123445668999999999 9999999999999999
Q ss_pred EEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC-CCeEEeecccc
Q 012219 244 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSE-LEAFVADFGVA 322 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~-~~~kl~Dfg~~ 322 (468)
.++||||+.+|+|.+++...+ .+.+.++..++.|++.|++||| +.||+||||||+|||++.+ +++||+|||++
T Consensus 95 ~~ivmEy~~gGdL~~~i~~~g---~l~E~~ar~~F~Qlisav~y~H---~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVNKG---RLKEDEARKYFRQLISAVAYCH---SRGIVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred EEEEEEecCCccHHHHHHHcC---CCChHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 999999999999999998733 3788999999999999999999 8899999999999999999 99999999999
Q ss_pred ccccCCCCCceeccccccccccccccCCC-CC-ccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCC
Q 012219 323 RLLNFDSSNRTLLAGTYGYIAPELAYTMV-VT-EKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLS 400 (468)
Q Consensus 323 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~-~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (468)
.............+|++.|+|||++.+.. |+ .++||||+||+||.|++|+.||++......... ....+ ..++
T Consensus 169 ~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~k--i~~~~---~~~p 243 (370)
T KOG0583|consen 169 AISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRK--IRKGE---FKIP 243 (370)
T ss_pred cccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHH--HhcCC---ccCC
Confidence 88743445566789999999999999877 75 789999999999999999999997332111111 11111 1111
Q ss_pred CccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHH-HHHHhc
Q 012219 401 PPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVS-NEFIAR 442 (468)
Q Consensus 401 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~-~~l~~~ 442 (468)
.... ...+..++.+|+..||.+|+++.+++ +.|.+.
T Consensus 244 ~~~~------S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 244 SYLL------SPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred CCcC------CHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 1110 11266789999999999999999988 445554
No 27
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-44 Score=335.73 Aligned_cols=266 Identities=20% Similarity=0.298 Sum_probs=207.4
Q ss_pred hhCccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CCceeeEEEEEeeCC-EEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEELASLESFGNEARLLSQIR-HRNIVKLYGFCLHRK-CMF 245 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~-~~~ 245 (468)
.++|...++||.|.||+||+|+ ..+|..||||++++....- + .-.=.+|+..|++++ ||||+++.+++.+.+ .++
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~-e-e~~nLREvksL~kln~hpniikL~Evi~d~~~~L~ 86 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSW-E-ECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY 86 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccH-H-HHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence 4678899999999999999996 5678999999998654331 1 112348999999999 999999999999887 899
Q ss_pred EEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccc
Q 012219 246 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLL 325 (468)
Q Consensus 246 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 325 (468)
+|||||+ .+|.++++.. .+.+++..+..|+.||++||+|+| .+|+.|||+||+|||+.....+||+|||+||.+
T Consensus 87 fVfE~Md-~NLYqLmK~R--~r~fse~~irnim~QilqGL~hiH---k~GfFHRDlKPENiLi~~~~~iKiaDFGLARev 160 (538)
T KOG0661|consen 87 FVFEFMD-CNLYQLMKDR--NRLFSESDIRNIMYQILQGLAHIH---KHGFFHRDLKPENILISGNDVIKIADFGLAREV 160 (538)
T ss_pred eeHHhhh-hhHHHHHhhc--CCcCCHHHHHHHHHHHHHHHHHHH---hcCcccccCChhheEecccceeEeccccccccc
Confidence 9999997 4999999875 456999999999999999999999 889999999999999999999999999999987
Q ss_pred cCCCCCceeccccccccccccc-cCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhh--------------cccc
Q 012219 326 NFDSSNRTLLAGTYGYIAPELA-YTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLD--------------KNIK 390 (468)
Q Consensus 326 ~~~~~~~~~~~g~~~y~aPE~~-~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~--------------~~~~ 390 (468)
. .....+..+.|.+|+|||++ ++..|+.+.||||+|||++|+.+-++-|........... ....
T Consensus 161 ~-SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~ 239 (538)
T KOG0661|consen 161 R-SKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYN 239 (538)
T ss_pred c-cCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHH
Confidence 6 34556667899999999976 467899999999999999999999988765433211000 0011
Q ss_pred cccccCCCCCC----ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 391 LIDLLDPRLSP----PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 391 ~~~~~~~~~~~----~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
+...+.-.++. ..............+++..|+..||.+|||+.+.+++-.-..
T Consensus 240 La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~ 296 (538)
T KOG0661|consen 240 LASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQV 296 (538)
T ss_pred HHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccc
Confidence 11111111111 111122223344778999999999999999999997654433
No 28
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=6.5e-44 Score=339.13 Aligned_cols=249 Identities=30% Similarity=0.434 Sum_probs=209.7
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|.||.||||+. .+.+.||+|.+.+....+ ..++...+|+++++.++|||||.++++|+...+.++|+
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~-k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVt 80 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNE-KELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVT 80 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCch-HHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEe
Confidence 4678888999999999999964 568999999998766554 45788999999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+.| +|..++..++. +++..+..|+.++..||.||| +.+|.|||+||+|||++..+.+|++|||+|+.+...
T Consensus 81 e~a~g-~L~~il~~d~~---lpEe~v~~~a~~LVsaL~yLh---s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~ 153 (808)
T KOG0597|consen 81 EYAVG-DLFTILEQDGK---LPEEQVRAIAYDLVSALYYLH---SNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN 153 (808)
T ss_pred hhhhh-hHHHHHHhccC---CCHHHHHHHHHHHHHHHHHHH---hcCcccccCCcceeeecCCCceeechhhhhhhcccC
Confidence 99987 99999987665 899999999999999999999 889999999999999999999999999999999877
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
....+...||+-|||||+..++.|+..+|.||+|||+||+.+|++||....- ....+.. .-|+...+.
T Consensus 154 t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si--~~Lv~~I----~~d~v~~p~------ 221 (808)
T KOG0597|consen 154 TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSI--TQLVKSI----LKDPVKPPS------ 221 (808)
T ss_pred ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHH--HHHHHHH----hcCCCCCcc------
Confidence 7777888999999999999999999999999999999999999999863221 0111000 012222221
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.....+..++...+.+||.+|.|-.+++.+
T Consensus 222 ~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 222 TASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred cccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 111126678889999999999999888744
No 29
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=2.4e-42 Score=328.17 Aligned_cols=254 Identities=22% Similarity=0.302 Sum_probs=199.8
Q ss_pred ccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEe
Q 012219 172 FHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEY 250 (468)
Q Consensus 172 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (468)
|...+.||+|+||.||+|.. .+++.||+|.+.............+.+|++++.+++|+|++++++++.+.+..++|+||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 66788999999999999975 57899999998765443333345678999999999999999999999999999999999
Q ss_pred ccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCC
Q 012219 251 MEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSS 330 (468)
Q Consensus 251 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 330 (468)
+++|+|.+++.... ...+++..++.++.|++.||+||| +.+|+||||||+||++++++.++|+|||++...... .
T Consensus 82 ~~~g~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~-~ 156 (285)
T cd05631 82 MNGGDLKFHIYNMG-NPGFDEQRAIFYAAELCCGLEDLQ---RERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG-E 156 (285)
T ss_pred cCCCcHHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC-C
Confidence 99999988876432 234889999999999999999999 789999999999999999999999999999775322 2
Q ss_pred CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHH
Q 012219 331 NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQD 410 (468)
Q Consensus 331 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (468)
......|+..|+|||++.+..++.++|||||||++|||++|+.||.................. .......... .
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~s----~- 230 (285)
T cd05631 157 TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKE-DQEEYSEKFS----E- 230 (285)
T ss_pred eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhc-ccccCCccCC----H-
Confidence 223456899999999999999999999999999999999999999754321110000000000 0011111111 1
Q ss_pred HHHHHHHHHhcccCCCCCCCC-----HHHHHHH
Q 012219 411 IILVSTVAFSCLRSQPKSRPT-----MQLVSNE 438 (468)
Q Consensus 411 ~~~l~~l~~~cl~~dP~~RPs-----~~~v~~~ 438 (468)
.+.+++.+||+.||++||+ +++++++
T Consensus 231 --~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 231 --DAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred --HHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 2667999999999999997 7888754
No 30
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-43 Score=336.75 Aligned_cols=264 Identities=25% Similarity=0.360 Sum_probs=212.2
Q ss_pred hhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
.+...+.++||+|.||.|..+....+..||||.++...... ..++|..|+++|.+++||||++++|+|..++.+++|+
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~--~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~ 614 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKN--ARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMIT 614 (807)
T ss_pred hhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchh--HHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHH
Confidence 34567889999999999999999888999999999876653 4689999999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
|||++|+|..++..+.... .......+|+.|||.|++||. +.++|||||.++|+|++.++++||+|||.++-+...
T Consensus 615 EYmEnGDLnqFl~aheapt-~~t~~~vsi~tqiasgmaYLe---s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg 690 (807)
T KOG1094|consen 615 EYMENGDLNQFLSAHELPT-AETAPGVSICTQIASGMAYLE---SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSG 690 (807)
T ss_pred HHHhcCcHHHHHHhccCcc-cccchhHHHHHHHHHHHHHHH---hhchhhccccccceeecCcccEEecCcccccccccC
Confidence 9999999999998775433 566677889999999999999 789999999999999999999999999999865433
Q ss_pred CCCc--eeccccccccccccccCCCCCccchhhHHHHHHHHHHh--CCCCCCcccccchhhhcccccccccCCCCCCccc
Q 012219 329 SSNR--TLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM--GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVD 404 (468)
Q Consensus 329 ~~~~--~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (468)
.+.. ...+-+.+|||||.+.-++++++||||+||+.+||+++ ...||+.+....... +..++++..-.....
T Consensus 691 ~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vve----n~~~~~~~~~~~~~l 766 (807)
T KOG1094|consen 691 DYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVE----NAGEFFRDQGRQVVL 766 (807)
T ss_pred CceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHH----hhhhhcCCCCcceec
Confidence 2222 22345679999999999999999999999999999986 888998766533221 112222111111111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 405 QKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 405 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
....-+...+++++.+||+.|-++||+++++...|+..
T Consensus 767 ~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 767 SRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred cCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 11111223377899999999999999999999988764
No 31
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-43 Score=308.11 Aligned_cols=239 Identities=27% Similarity=0.384 Sum_probs=202.8
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|+....||.|+||.|..++.+ +|..+|+|++.........+.+...+|..+|+.+.||+++++++.+.+.+..+|||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 56888999999999999999754 68899999999988888888888999999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||++||.|..++++.+. +++..+.-+|.+|+.||+||| +.+|++|||||+|||+|.+|.+||+|||+|+....
T Consensus 124 eyv~GGElFS~Lrk~~r---F~e~~arFYAAeivlAleylH---~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~- 196 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSGR---FSEPHARFYAAEIVLALEYLH---SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG- 196 (355)
T ss_pred eccCCccHHHHHHhcCC---CCchhHHHHHHHHHHHHHHHH---hcCeeeccCChHHeeeccCCcEEEEeccceEEecC-
Confidence 99999999999987654 899999999999999999999 88999999999999999999999999999998652
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
.....+||+.|+|||.+.+..+..++|.|||||++|||+.|.+||...... .........+ -.++......
T Consensus 197 --rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~--~iY~KI~~~~---v~fP~~fs~~-- 267 (355)
T KOG0616|consen 197 --RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPI--QIYEKILEGK---VKFPSYFSSD-- 267 (355)
T ss_pred --cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChH--HHHHHHHhCc---ccCCcccCHH--
Confidence 355679999999999999999999999999999999999999999754331 1111111111 1122222221
Q ss_pred HHHHHHHHHHHhcccCCCCCC
Q 012219 409 QDIILVSTVAFSCLRSQPKSR 429 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~R 429 (468)
+.+|+.+.++.|-.+|
T Consensus 268 -----~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 268 -----AKDLLKKLLQVDLTKR 283 (355)
T ss_pred -----HHHHHHHHHhhhhHhh
Confidence 4567778888888888
No 32
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=2.8e-42 Score=330.88 Aligned_cols=259 Identities=23% Similarity=0.355 Sum_probs=198.3
Q ss_pred hCccccceeeeeCCceEEEEEcCC-----------------CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCcee
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPS-----------------GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIV 232 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 232 (468)
++|.+.+.||+|+||.||+|.+++ +..||+|.+...... .....|.+|++++.+++||||+
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv 82 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANK--NARNDFLKEVKILSRLKDPNII 82 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCH--HHHHHHHHHHHHHhhcCCCCee
Confidence 578889999999999999997532 346999998765432 2356789999999999999999
Q ss_pred eEEEEEeeCCEEEEEEEeccCCChhhhhhcCc----------------ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 012219 233 KLYGFCLHRKCMFLIYEYMEMGSLFCVLRTDE----------------EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPI 296 (468)
Q Consensus 233 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~----------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~i 296 (468)
++++++...+..++||||+++|+|.+++.... ....+++..+++++.||+.||.||| +.+|
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i 159 (304)
T cd05096 83 RLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS---SLNF 159 (304)
T ss_pred EEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH---HCCc
Confidence 99999999999999999999999999886421 1124688899999999999999999 7899
Q ss_pred EecCCCCCceeeCCCCCeEEeeccccccccCCCCC--ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh--CC
Q 012219 297 VHRDISSNNVLLNSELEAFVADFGVARLLNFDSSN--RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM--GK 372 (468)
Q Consensus 297 vH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t--g~ 372 (468)
+||||||+||+++.++.+||+|||+++........ .....++..|+|||++....++.++||||||+++|||++ +.
T Consensus 160 vH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~ 239 (304)
T cd05096 160 VHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKE 239 (304)
T ss_pred cccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCC
Confidence 99999999999999999999999999765322211 112345778999999988899999999999999999997 56
Q ss_pred CCCCcccccchhhhcccccc---cccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 012219 373 HPGELLSSSSWSLDKNIKLI---DLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFI 440 (468)
Q Consensus 373 ~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~ 440 (468)
.||................. ........+..+ ..+.+++.+||+.||++|||+.+|.+.|+
T Consensus 240 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 240 QPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCP-------QGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCCCcCCHHHHHHHHHHHhhhccccccccCCCCCC-------HHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 67765432211100000000 000000111111 22678999999999999999999988875
No 33
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.1e-42 Score=336.49 Aligned_cols=245 Identities=22% Similarity=0.292 Sum_probs=197.7
Q ss_pred ceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEeccCC
Q 012219 176 YCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYMEMG 254 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 254 (468)
+.||+|+||.||+++. .+|+.||+|++.............+.+|++++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 3699999999999975 578999999998654433344567889999999999999999999999999999999999999
Q ss_pred ChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCcee
Q 012219 255 SLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRTL 334 (468)
Q Consensus 255 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 334 (468)
+|.+++.... .+++.++..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++...........
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~ 154 (323)
T cd05571 81 ELFFHLSRER---VFSEDRARFYGAEIVSALGYLH---SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 154 (323)
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccc
Confidence 9999987543 3889999999999999999999 789999999999999999999999999999764333333444
Q ss_pred ccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHH
Q 012219 335 LAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILV 414 (468)
Q Consensus 335 ~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 414 (468)
..|++.|+|||++.+..++.++|||||||++|||+||+.||........... ...-+..+..... . .+
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~-----~~~~~~~~p~~~~----~---~~ 222 (323)
T cd05571 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL-----ILMEEIRFPRTLS----P---EA 222 (323)
T ss_pred eecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHH-----HHcCCCCCCCCCC----H---HH
Confidence 6799999999999999999999999999999999999999865332111000 0000111222111 1 26
Q ss_pred HHHHHhcccCCCCCCC-----CHHHHHHH
Q 012219 415 STVAFSCLRSQPKSRP-----TMQLVSNE 438 (468)
Q Consensus 415 ~~l~~~cl~~dP~~RP-----s~~~v~~~ 438 (468)
.+++.+||+.||++|| ++.+++++
T Consensus 223 ~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 223 KSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred HHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 6789999999999999 78888753
No 34
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.8e-42 Score=336.44 Aligned_cols=255 Identities=22% Similarity=0.280 Sum_probs=203.7
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|++.+.||+|+||.||+|+.. +++.||+|++...........+.+.+|++++..++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36888999999999999999764 58999999998654433344567889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++|+|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLG---VLSEDHARFYMAEMFEAVDALH---ELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT- 153 (333)
T ss_pred eCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEEEeCcCCccccc-
Confidence 9999999999997543 3788999999999999999999 78999999999999999999999999999976532
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccC-CCCCCccchhH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLD-PRLSPPVDQKI 407 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 407 (468)
......|++.|+|||++.+..++.++|||||||++|||++|+.||.......... ........+. +.......
T Consensus 154 --~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~--- 227 (333)
T cd05600 154 --YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWE-NLKYWKETLQRPVYDDPRF--- 227 (333)
T ss_pred --ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHH-HHHhccccccCCCCCcccc---
Confidence 2334568999999999999899999999999999999999999997543221100 0000011111 11110000
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.....+.+++.+|+..+|.+||++++++++
T Consensus 228 -~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 228 -NLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred -ccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 111226678999999999999999999965
No 35
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=4.3e-42 Score=338.52 Aligned_cols=258 Identities=25% Similarity=0.352 Sum_probs=201.7
Q ss_pred hhCccccceeeeeCCceEEEEEc------CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeC
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL------PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHR 241 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 241 (468)
.++|++.+.||+|+||.||+|.. .++..||||+++..... ...+.+.+|++++..+ +||||++++++|...
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~ 111 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHL--TEREALMSELKVLSYLGNHINIVNLLGACTVG 111 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCc--HHHHHHHHHHHHHHHhcCCcceeeeeeeeccC
Confidence 45789999999999999999963 34668999999754432 2346788999999999 899999999999999
Q ss_pred CEEEEEEEeccCCChhhhhhcCcc--------------------------------------------------------
Q 012219 242 KCMFLIYEYMEMGSLFCVLRTDEE-------------------------------------------------------- 265 (468)
Q Consensus 242 ~~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------------------------- 265 (468)
...++||||+++|+|.++++....
T Consensus 112 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (375)
T cd05104 112 GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRS 191 (375)
T ss_pred CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccc
Confidence 999999999999999999864321
Q ss_pred ----------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 266 ----------------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 266 ----------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
...+++..++.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 268 (375)
T cd05104 192 GSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDS 268 (375)
T ss_pred ceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCchhhEEEECCCcEEEecCccceeccCcc
Confidence 124788899999999999999999 7899999999999999999999999999998664322
Q ss_pred CC--ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchh
Q 012219 330 SN--RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQK 406 (468)
Q Consensus 330 ~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (468)
.. .....++..|+|||++.+..++.++|||||||++|||++ |..||............. .....+......
T Consensus 269 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~---~~~~~~~~~~~~--- 342 (375)
T cd05104 269 NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMI---KEGYRMLSPECA--- 342 (375)
T ss_pred cccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHH---HhCccCCCCCCC---
Confidence 21 112234567999999999999999999999999999998 899987543221111100 000000011111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHh
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIA 441 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~ 441 (468)
...+.+++.+||+.||++|||+.+|++.|++
T Consensus 343 ----~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 343 ----PSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred ----CHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 1137789999999999999999999999985
No 36
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1.3e-42 Score=331.02 Aligned_cols=248 Identities=25% Similarity=0.336 Sum_probs=201.0
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|++.+.||+|+||.||+|... +++.||+|++...........+.+.+|++++++++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36888999999999999999764 68999999997654433344567889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++|+|.+++.... .+++.....++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~ 154 (291)
T cd05612 81 EYVPGGELFSYLRNSG---RFSNSTGLFYASEIVCALEYLH---SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR 154 (291)
T ss_pred eCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC
Confidence 9999999999997643 3888999999999999999999 789999999999999999999999999999765422
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
.....|++.|+|||++.+..++.++|||||||++|||++|+.||........... . .. -...+.....
T Consensus 155 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~-i---~~-~~~~~~~~~~---- 222 (291)
T cd05612 155 ---TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEK-I---LA-GKLEFPRHLD---- 222 (291)
T ss_pred ---cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH-H---Hh-CCcCCCccCC----
Confidence 2234689999999999988899999999999999999999999875432111100 0 00 0011111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCC-----HHHHHHH
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPT-----MQLVSNE 438 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs-----~~~v~~~ 438 (468)
..+.+++.+||+.||.+||+ +++++++
T Consensus 223 ---~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 223 ---LYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred ---HHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 12667999999999999995 8888755
No 37
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-43 Score=329.45 Aligned_cols=251 Identities=29% Similarity=0.434 Sum_probs=209.9
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
..|+..+.||+|.||.||+|.. ..++.||+|++..+...+ .+++..+|+.++.+++++||.+++|.+..+..++++|
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~d--eIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiM 90 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAED--EIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIM 90 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcch--hhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHH
Confidence 3466678899999999999964 578999999998776553 4678889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
|||.||++.+.++...- +++....-|+.++..|+.||| ..+.+|||||+.||++..+|.+|++|||.+-.+...
T Consensus 91 ey~~gGsv~~lL~~~~~---~~E~~i~~ilre~l~~l~ylH---~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~ 164 (467)
T KOG0201|consen 91 EYCGGGSVLDLLKSGNI---LDEFEIAVILREVLKGLDYLH---SEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNT 164 (467)
T ss_pred HHhcCcchhhhhccCCC---CccceeeeehHHHHHHhhhhh---hcceecccccccceeEeccCcEEEEecceeeeeech
Confidence 99999999999986543 467777788999999999999 789999999999999999999999999999888766
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
......++||+.|||||++....|+.|+||||||++.+||.+|.+|+......+..+ .+.+-..|.+...+..
T Consensus 165 ~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlf----lIpk~~PP~L~~~~S~--- 237 (467)
T KOG0201|consen 165 VKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLF----LIPKSAPPRLDGDFSP--- 237 (467)
T ss_pred hhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEE----eccCCCCCccccccCH---
Confidence 666677899999999999998899999999999999999999999987665422211 1122222333332222
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
.+.+++..|+++||+.||++.+++.+=
T Consensus 238 ----~~kEFV~~CL~k~P~~RpsA~~LLKh~ 264 (467)
T KOG0201|consen 238 ----PFKEFVEACLDKNPEFRPSAKELLKHK 264 (467)
T ss_pred ----HHHHHHHHHhhcCcccCcCHHHHhhhH
Confidence 266788999999999999999998543
No 38
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.5e-43 Score=300.03 Aligned_cols=253 Identities=31% Similarity=0.440 Sum_probs=213.3
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|++.+.||+|.||.||.|+. +++-.||+|++.+.........+++.+|+++.+.|+||||+++++++.+....||+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 46899999999999999999975 56889999999887766656678899999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
+||..+|++...|..... ..+++.....++.|+|.||.|+| .++|+||||||+|+|++.++..||+|||-+..-
T Consensus 101 lEya~~gel~k~L~~~~~-~~f~e~~~a~Yi~q~A~Al~y~h---~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~-- 174 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRM-KRFDEQRAATYIKQLANALLYCH---LKRVIHRDIKPENLLLGSAGELKIADFGWSVHA-- 174 (281)
T ss_pred EEecCCchHHHHHHhccc-ccccccchhHHHHHHHHHHHHhc---cCCcccCCCCHHHhccCCCCCeeccCCCceeec--
Confidence 999999999999985432 34888889999999999999999 899999999999999999999999999988653
Q ss_pred CCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
+.......+||..|.|||...+..++..+|+|++|++.||++.|.+||+.... ....+...-.+..+ +......
T Consensus 175 p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~--~etYkrI~k~~~~~---p~~is~~- 248 (281)
T KOG0580|consen 175 PSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH--SETYKRIRKVDLKF---PSTISGG- 248 (281)
T ss_pred CCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh--HHHHHHHHHccccC---CcccChh-
Confidence 25556677999999999999999999999999999999999999999986542 11111222222222 2333322
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
..+++..|+..+|.+|.+..|++.+.
T Consensus 249 ------a~dlI~~ll~~~p~~r~~l~~v~~hp 274 (281)
T KOG0580|consen 249 ------AADLISRLLVKNPIERLALTEVMDHP 274 (281)
T ss_pred ------HHHHHHHHhccCccccccHHHHhhhH
Confidence 45688899999999999999998764
No 39
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=6.5e-42 Score=336.98 Aligned_cols=259 Identities=26% Similarity=0.391 Sum_probs=202.0
Q ss_pred hhCccccceeeeeCCceEEEEEc------CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeC
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL------PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHR 241 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 241 (468)
.++|.+.+.||+|+||.||+|.. .++..||+|+++...... ....+.+|+++++.+ +|+||++++++|...
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~ 114 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTD--EREALMSELKILSHLGQHKNIVNLLGACTHG 114 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHH--HHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence 45789999999999999999863 234579999997654332 346788999999999 899999999999999
Q ss_pred CEEEEEEEeccCCChhhhhhcCcc--------------------------------------------------------
Q 012219 242 KCMFLIYEYMEMGSLFCVLRTDEE-------------------------------------------------------- 265 (468)
Q Consensus 242 ~~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------------------------- 265 (468)
...++||||+++|+|.++++....
T Consensus 115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (374)
T cd05106 115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS 194 (374)
T ss_pred CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence 999999999999999998854211
Q ss_pred -----------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCC--c
Q 012219 266 -----------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSN--R 332 (468)
Q Consensus 266 -----------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~--~ 332 (468)
...+++.++++++.||+.||.||| +.+|+||||||+||++++++.+||+|||+++........ .
T Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~ 271 (374)
T cd05106 195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA---SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVK 271 (374)
T ss_pred ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeec
Confidence 124788899999999999999999 789999999999999999999999999999765432211 1
Q ss_pred eeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHH
Q 012219 333 TLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDI 411 (468)
Q Consensus 333 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (468)
....++..|+|||++....++.++|||||||++|||++ |+.||............. .....+......+
T Consensus 272 ~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~---~~~~~~~~~~~~~------- 341 (374)
T cd05106 272 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMV---KRGYQMSRPDFAP------- 341 (374)
T ss_pred cCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHH---HcccCccCCCCCC-------
Confidence 12234567999999988899999999999999999997 999987543221111100 0001111111111
Q ss_pred HHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 412 ILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 412 ~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
..+.+++.+||+.||++|||+.+|++.|++.
T Consensus 342 ~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 342 PEIYSIMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 1267799999999999999999999999874
No 40
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=3.2e-42 Score=331.59 Aligned_cols=242 Identities=24% Similarity=0.330 Sum_probs=194.3
Q ss_pred eeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEeccCCCh
Q 012219 178 IGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYMEMGSL 256 (468)
Q Consensus 178 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 256 (468)
||+|+||.||+|+.. +++.||+|++.............+.+|++++.+++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999754 6889999999765433334456788999999999999999999999999999999999999999
Q ss_pred hhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCceecc
Q 012219 257 FCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRTLLA 336 (468)
Q Consensus 257 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 336 (468)
.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++.............
T Consensus 81 ~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 154 (312)
T cd05585 81 FHHLQREG---RFDLSRARFYTAELLCALENLH---KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFC 154 (312)
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCcccccc
Confidence 99997643 3889999999999999999999 78999999999999999999999999999976433333334457
Q ss_pred ccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHHHH
Q 012219 337 GTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVST 416 (468)
Q Consensus 337 g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 416 (468)
||+.|+|||++.+..++.++|||||||++|||+||+.||........... ... -...+..... . .+.+
T Consensus 155 gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~-~~~----~~~~~~~~~~----~---~~~~ 222 (312)
T cd05585 155 GTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRK-ILQ----EPLRFPDGFD----R---DAKD 222 (312)
T ss_pred CCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHH-HHc----CCCCCCCcCC----H---HHHH
Confidence 99999999999999999999999999999999999999975432211110 000 0111111111 1 2667
Q ss_pred HHHhcccCCCCCCCC---HHHHHH
Q 012219 417 VAFSCLRSQPKSRPT---MQLVSN 437 (468)
Q Consensus 417 l~~~cl~~dP~~RPs---~~~v~~ 437 (468)
++.+||+.||++||+ +.+++.
T Consensus 223 li~~~L~~dp~~R~~~~~~~e~l~ 246 (312)
T cd05585 223 LLIGLLSRDPTRRLGYNGAQEIKN 246 (312)
T ss_pred HHHHHcCCCHHHcCCCCCHHHHHc
Confidence 899999999999985 566664
No 41
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=3.6e-42 Score=333.55 Aligned_cols=248 Identities=23% Similarity=0.327 Sum_probs=201.3
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|+||.||+|+.. +++.||+|++...........+.+.+|++++++++||||+++++++...+..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 57899999999999999999764 68999999997654433345567889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 98 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 171 (329)
T PTZ00263 98 EFVVGGELFTHLRKAG---RFPNDVAKFYHAELVLAFEYLH---SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR 171 (329)
T ss_pred cCCCCChHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC
Confidence 9999999999997643 3788888999999999999999 789999999999999999999999999999865422
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
.....|++.|+|||++.+..++.++|||||||++|||+||+.||......... . .+.+. ...++...+
T Consensus 172 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~-~---~i~~~-~~~~p~~~~---- 239 (329)
T PTZ00263 172 ---TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIY-E---KILAG-RLKFPNWFD---- 239 (329)
T ss_pred ---cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHH-H---HHhcC-CcCCCCCCC----
Confidence 22357899999999999999999999999999999999999998653321110 0 00000 011111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCC-----HHHHHHH
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPT-----MQLVSNE 438 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs-----~~~v~~~ 438 (468)
. .+.+++.+||+.||++||+ +++++++
T Consensus 240 ~---~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 240 G---RARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred H---HHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 1 2567999999999999997 6777744
No 42
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=5.7e-42 Score=331.29 Aligned_cols=245 Identities=23% Similarity=0.297 Sum_probs=196.6
Q ss_pred ceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEeccCC
Q 012219 176 YCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYMEMG 254 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 254 (468)
+.||+|+||.||++.. .+|+.||+|++.............+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 3699999999999975 578999999998654333334567788999999999999999999999999999999999999
Q ss_pred ChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCcee
Q 012219 255 SLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRTL 334 (468)
Q Consensus 255 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 334 (468)
+|..++.... .+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++...........
T Consensus 81 ~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~ 154 (323)
T cd05595 81 ELFFHLSRER---VFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKT 154 (323)
T ss_pred cHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCcccc
Confidence 9998886543 3889999999999999999999 789999999999999999999999999998764333333344
Q ss_pred ccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHH
Q 012219 335 LAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILV 414 (468)
Q Consensus 335 ~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 414 (468)
..|++.|+|||++.+..++.++|||||||++|||++|+.||........... . ...+..+..... . .+
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~--~---~~~~~~~p~~~~----~---~~ 222 (323)
T cd05595 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFEL--I---LMEEIRFPRTLS----P---EA 222 (323)
T ss_pred ccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHH--H---hcCCCCCCCCCC----H---HH
Confidence 5789999999999999999999999999999999999999865432111000 0 000111122121 1 25
Q ss_pred HHHHHhcccCCCCCCC-----CHHHHHHH
Q 012219 415 STVAFSCLRSQPKSRP-----TMQLVSNE 438 (468)
Q Consensus 415 ~~l~~~cl~~dP~~RP-----s~~~v~~~ 438 (468)
.+++.+||+.||++|| ++.+++++
T Consensus 223 ~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 223 KSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred HHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 6789999999999998 78888753
No 43
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=7.8e-42 Score=330.95 Aligned_cols=245 Identities=23% Similarity=0.302 Sum_probs=197.6
Q ss_pred ceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEeccCC
Q 012219 176 YCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYMEMG 254 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 254 (468)
+.||+|+||.||+++. .+++.||+|++.............+.+|+++++.++||||+++.+++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 3699999999999975 568999999998654333344567889999999999999999999999999999999999999
Q ss_pred ChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCcee
Q 012219 255 SLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRTL 334 (468)
Q Consensus 255 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 334 (468)
+|..++.... .+++.++..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++...........
T Consensus 81 ~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~ 154 (328)
T cd05593 81 ELFFHLSRER---VFSEDRTRFYGAEIVSALDYLH---SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKT 154 (328)
T ss_pred CHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeEECCCCcEEEecCcCCccCCCccccccc
Confidence 9998886543 3889999999999999999999 789999999999999999999999999998764333333344
Q ss_pred ccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHH
Q 012219 335 LAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILV 414 (468)
Q Consensus 335 ~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 414 (468)
..|++.|+|||++.+..++.++|||||||++|||++|+.||......... .. ....+..+..... . .+
T Consensus 155 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~-~~----~~~~~~~~p~~~~----~---~~ 222 (328)
T cd05593 155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF-EL----ILMEDIKFPRTLS----A---DA 222 (328)
T ss_pred ccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHH-HH----hccCCccCCCCCC----H---HH
Confidence 57999999999999889999999999999999999999999653321111 00 0001111222221 1 26
Q ss_pred HHHHHhcccCCCCCCC-----CHHHHHHH
Q 012219 415 STVAFSCLRSQPKSRP-----TMQLVSNE 438 (468)
Q Consensus 415 ~~l~~~cl~~dP~~RP-----s~~~v~~~ 438 (468)
.+++.+||+.||++|| ++.+++++
T Consensus 223 ~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 223 KSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred HHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 6789999999999997 88988864
No 44
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.4e-41 Score=327.05 Aligned_cols=199 Identities=28% Similarity=0.358 Sum_probs=173.9
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|++.+.||+|+||.||+++.. ++..+|+|.+...... ...+.+.+|++++++++||||+++++++...+..++||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKP--AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCH--HHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEe
Confidence 67899999999999999999754 6888999998764322 23467889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++|+|.+++.... .+++..+..++.|++.||.|||+ ..+|+||||||+||+++.++.+||+|||++.....
T Consensus 83 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~--~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~- 156 (331)
T cd06649 83 EHMDGGSLDQVLKEAK---RIPEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID- 156 (331)
T ss_pred ecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHhh--cCCEEcCCCChhhEEEcCCCcEEEccCcccccccc-
Confidence 9999999999997643 37889999999999999999994 24699999999999999999999999999976532
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCc
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGEL 377 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~ 377 (468)
.......|+..|+|||++.+..++.++|||||||++|||+||+.||..
T Consensus 157 -~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 157 -SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred -cccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 222345689999999999998999999999999999999999999864
No 45
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=6.1e-42 Score=332.76 Aligned_cols=248 Identities=24% Similarity=0.342 Sum_probs=200.7
Q ss_pred hCccccceeeeeCCceEEEEEcCC--CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPS--GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
++|.+.+.||+|+||.||+|.... +..||+|++...........+.+.+|++++..++||||+++++++...+..++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 568999999999999999997533 368999999765433334456788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|||+++|+|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 110 ~Ey~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRNK---RFPNDVGCFYAAQIVLIFEYLQ---SLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 99999999999997654 3889999999999999999999 78999999999999999999999999999987542
Q ss_pred CCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ... +... ...++....
T Consensus 184 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~-~~~---i~~~-~~~~p~~~~--- 252 (340)
T PTZ00426 184 ---RTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLI-YQK---ILEG-IIYFPKFLD--- 252 (340)
T ss_pred ---CcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHH-HHH---HhcC-CCCCCCCCC---
Confidence 22345789999999999988899999999999999999999999975432111 010 0000 011111111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCC-----CHHHHHHH
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRP-----TMQLVSNE 438 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RP-----s~~~v~~~ 438 (468)
. .+.+++.+|++.||++|+ ++++++++
T Consensus 253 -~---~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 253 -N---NCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred -H---HHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 1 156789999999999995 88888765
No 46
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.1e-42 Score=316.83 Aligned_cols=251 Identities=22% Similarity=0.390 Sum_probs=214.4
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
..+|++.+.||+|.||.|-+++. ..|+.||||.++++...+...+-.+.+|+++|+.|+||||+.++++|...+...||
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 35788899999999999999964 78999999999998887777778899999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|||..+|.|.+++...+. +++.+...++.||..|+.|+| ..+++|||||.+|||+|.++++||+|||++..+.
T Consensus 132 MEYaS~GeLYDYiSer~~---LsErEaRhfFRQIvSAVhYCH---knrVvHRDLKLENILLD~N~NiKIADFGLSNly~- 204 (668)
T KOG0611|consen 132 MEYASGGELYDYISERGS---LSEREARHFFRQIVSAVHYCH---KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYA- 204 (668)
T ss_pred EEecCCccHHHHHHHhcc---ccHHHHHHHHHHHHHHHHHHh---hccceecccchhheeecCCCCeeeeccchhhhhc-
Confidence 999999999999987654 999999999999999999999 7899999999999999999999999999998775
Q ss_pred CCCCceeccccccccccccccCCCCC-ccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchh
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTMVVT-EKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQK 406 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (468)
+......++|++-|.+||...+..|. +.+|-||+||+||-|+.|..||+..+..... +.........|.-+. .
T Consensus 205 ~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lv--rQIs~GaYrEP~~PS----d 278 (668)
T KOG0611|consen 205 DKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLV--RQISRGAYREPETPS----D 278 (668)
T ss_pred cccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHH--HHhhcccccCCCCCc----h
Confidence 55667778999999999999998874 6899999999999999999999865432111 111112222222221 1
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
-.-+|.+||..+|++|-|+.+|..+|
T Consensus 279 -------A~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 279 -------ASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred -------HHHHHHHHHhcCcccchhHHHHhhhh
Confidence 12378899999999999999999887
No 47
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=3.2e-41 Score=317.21 Aligned_cols=254 Identities=24% Similarity=0.334 Sum_probs=200.9
Q ss_pred hCccccceeeeeCCceEEEEEcC----CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP----SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMF 245 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 245 (468)
++|.+.+.||+|+||.||+|.+. .+..||+|.++..... .....|.+|+..+.+++||||++++|++...+..+
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 82 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSD--KQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMM 82 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCH--HHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcE
Confidence 56888999999999999999642 4668999999865433 23467889999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccc
Q 012219 246 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLL 325 (468)
Q Consensus 246 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 325 (468)
+||||+++|+|.+++.... ..+++..++.++.|++.||+||| +.+++||||||+||+++.++.++++|||.+...
T Consensus 83 lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~i~~al~~lH---~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~ 157 (266)
T cd05064 83 IVTEYMSNGALDSFLRKHE--GQLVAGQLMGMLPGLASGMKYLS---EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQED 157 (266)
T ss_pred EEEEeCCCCcHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCEeeccccHhhEEEcCCCcEEECCCcccccc
Confidence 9999999999999997643 24889999999999999999999 789999999999999999999999999987654
Q ss_pred cCCCCC-ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCcc
Q 012219 326 NFDSSN-RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPV 403 (468)
Q Consensus 326 ~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (468)
...... .....++..|+|||.+.+..++.++|||||||++||+++ |+.||........... ..+..........
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~ 233 (266)
T cd05064 158 KSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKA----VEDGFRLPAPRNC 233 (266)
T ss_pred cccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHH----HHCCCCCCCCCCC
Confidence 221111 112234578999999999999999999999999999875 9999875433211111 0111111111111
Q ss_pred chhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHh
Q 012219 404 DQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIA 441 (468)
Q Consensus 404 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~ 441 (468)
...+.+++.+||+.+|++||+++++.+.|.+
T Consensus 234 -------~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~ 264 (266)
T cd05064 234 -------PNLLHQLMLDCWQKERGERPRFSQIHSILSK 264 (266)
T ss_pred -------CHHHHHHHHHHcCCCchhCCCHHHHHHHHHh
Confidence 1236779999999999999999999998865
No 48
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=5.3e-41 Score=318.11 Aligned_cols=250 Identities=24% Similarity=0.309 Sum_probs=196.2
Q ss_pred eeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEeccCCCh
Q 012219 178 IGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYMEMGSL 256 (468)
Q Consensus 178 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 256 (468)
||+|+||+||++.. .+++.+|+|.+...........+.+..|+++++.++|+||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 69999999999965 47889999999765444333456778899999999999999999999999999999999999999
Q ss_pred hhhhhcC-cccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCceec
Q 012219 257 FCVLRTD-EEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRTLL 335 (468)
Q Consensus 257 ~~~l~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 335 (468)
..++... .....+++..++.++.||+.||.||| +.+|+||||||+||+++.++.++|+|||++.............
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~ 157 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH---QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGY 157 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccccc
Confidence 9887542 22345899999999999999999999 7899999999999999999999999999997765433333345
Q ss_pred cccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHHH
Q 012219 336 AGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVS 415 (468)
Q Consensus 336 ~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 415 (468)
.|++.|+|||++.+..++.++|||||||++|||++|+.||............. ......... .... ....+.
T Consensus 158 ~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~---~~~~~~~~~--~~~~---~~~~~~ 229 (280)
T cd05608 158 AGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK---QRILNDSVT--YPDK---FSPASK 229 (280)
T ss_pred CCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHH---HhhcccCCC--Cccc---CCHHHH
Confidence 78999999999999999999999999999999999999997543211110000 001111111 0011 112266
Q ss_pred HHHHhcccCCCCCCC-----CHHHHHHH
Q 012219 416 TVAFSCLRSQPKSRP-----TMQLVSNE 438 (468)
Q Consensus 416 ~l~~~cl~~dP~~RP-----s~~~v~~~ 438 (468)
+++.+||+.||++|| ++++++++
T Consensus 230 ~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 230 SFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred HHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 789999999999999 67777754
No 49
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=5.6e-42 Score=320.94 Aligned_cols=249 Identities=33% Similarity=0.502 Sum_probs=190.0
Q ss_pred ccceeeeeCCceEEEEEcC-----CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 174 IKYCIGTGGYGSVYRARLP-----SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 174 ~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
+.+.||.|.||.||+|.+. .+..|+||.++..... ...+.|.+|++.+++++||||++++|+|...+..++|+
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~--~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~ 80 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSE--EEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVM 80 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSH--HHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccccc--ccceeeeecccccccccccccccccccccccccccccc
Confidence 4578999999999999765 3678999999654333 23678999999999999999999999999888899999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++|+|.+++.... ...+++..++.|+.||+.||+||| +.+++|+||+++||+++.++.+||+|||+++.....
T Consensus 81 e~~~~g~L~~~L~~~~-~~~~~~~~~~~i~~~i~~~l~~Lh---~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~ 156 (259)
T PF07714_consen 81 EYCPGGSLDDYLKSKN-KEPLSEQQRLSIAIQIAEALSYLH---SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEK 156 (259)
T ss_dssp E--TTEBHHHHHHHTC-TTTSBHHHHHHHHHHHHHHHHHHH---HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTS
T ss_pred cccccccccccccccc-cccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccc
Confidence 9999999999998762 234899999999999999999999 678999999999999999999999999999876322
Q ss_pred CCC--ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccch
Q 012219 329 SSN--RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQ 405 (468)
Q Consensus 329 ~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (468)
... .........|+|||.+....++.++||||||+++|||++ |+.||........... . .+..........+
T Consensus 157 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~-~---~~~~~~~~~~~~~- 231 (259)
T PF07714_consen 157 SKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEK-L---KQGQRLPIPDNCP- 231 (259)
T ss_dssp SSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHH-H---HTTEETTSBTTSB-
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-c---cccccceeccchh-
Confidence 111 122346778999999999989999999999999999999 7899876533221111 0 0000011111111
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 406 KIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 406 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
. .+.+++..||+.||++|||++++++.|
T Consensus 232 ---~---~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 232 ---K---DIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ---H---HHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ---H---HHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 1 266799999999999999999999875
No 50
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-41 Score=340.79 Aligned_cols=266 Identities=23% Similarity=0.344 Sum_probs=211.1
Q ss_pred hhCccccceeeeeCCceEEEEEcCCC-CEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CCceeeEEE-EEee-----
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPSG-KVVALKKLHRSETEELASLESFGNEARLLSQIR-HRNIVKLYG-FCLH----- 240 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~-~~~~----- 240 (468)
..++++.+.|.+|||+.||.|....+ ..+|+|++-..+. ..++...+|+++|+.|+ |+|||.+++ ....
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de---~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~ 112 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDE---EALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNN 112 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCH---HHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCC
Confidence 34677889999999999999986555 9999999976643 45788899999999997 999999999 3322
Q ss_pred -CCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeec
Q 012219 241 -RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADF 319 (468)
Q Consensus 241 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 319 (468)
..+++|.||||.||.|.+++...-... |++.++++|+.|+|+|+++||.. .++|||||||.+|||++.++..|||||
T Consensus 113 ~~~EvllLmEyC~gg~Lvd~mn~Rlq~~-lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDF 190 (738)
T KOG1989|consen 113 GVWEVLLLMEYCKGGSLVDFMNTRLQTR-LTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDF 190 (738)
T ss_pred ceeEEEeehhhccCCcHHHHHHHHHhcc-CChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcc
Confidence 235899999999999999998654443 99999999999999999999976 788999999999999999999999999
Q ss_pred cccccccCCCCCce---------eccccccccccccc---cCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhc
Q 012219 320 GVARLLNFDSSNRT---------LLAGTYGYIAPELA---YTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDK 387 (468)
Q Consensus 320 g~~~~~~~~~~~~~---------~~~g~~~y~aPE~~---~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~ 387 (468)
|.+........... ...-|+.|+|||++ .+..+++|+|||++||+||-|+....||+.....
T Consensus 191 GSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l------ 264 (738)
T KOG1989|consen 191 GSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL------ 264 (738)
T ss_pred cccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce------
Confidence 99865432221110 12358999999976 4678999999999999999999999999854321
Q ss_pred ccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCCCCCCCccc
Q 012219 388 NIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKAPMQKPFHE 453 (468)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~~~~~~~~~ 453 (468)
.++.-.+.-+... .....+..||..||++||.+||++.+|++.+.++...+.+.+...
T Consensus 265 -----aIlng~Y~~P~~p---~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~~~~~~ 322 (738)
T KOG1989|consen 265 -----AILNGNYSFPPFP---NYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCPIPDIY 322 (738)
T ss_pred -----eEEeccccCCCCc---cHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCCccccc
Confidence 1222222221111 223347789999999999999999999999999887666544433
No 51
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2.3e-41 Score=324.36 Aligned_cols=261 Identities=25% Similarity=0.338 Sum_probs=197.3
Q ss_pred hhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||.||+|+.. +++.||+|++....... ....+.+|+++++.++||||+++++++......++|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEG--TPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLV 81 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccc--cchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEE
Confidence 367999999999999999999764 68899999987543321 234567899999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|||+. ++|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 82 ~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 155 (303)
T cd07869 82 FEYVH-TDLCQYMDKHP--GGLHPENVKLFLFQLLRGLSYIH---QRYILHRDLKPQNLLISDTGELKLADFGLARAKSV 155 (303)
T ss_pred EECCC-cCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECCCCcceeccC
Confidence 99996 68888776543 23788899999999999999999 78999999999999999999999999999976543
Q ss_pred CCCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccccc------------cc-
Q 012219 328 DSSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKL------------ID- 393 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~------------~~- 393 (468)
.........+++.|+|||++.+ ..++.++||||+||++|||++|+.||................ ..
T Consensus 156 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (303)
T cd07869 156 PSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSL 235 (303)
T ss_pred CCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhc
Confidence 3333344568899999998765 458889999999999999999999997543221111100000 00
Q ss_pred -ccCC-CCCCccchhHHH------HHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 394 -LLDP-RLSPPVDQKIRQ------DIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 394 -~~~~-~~~~~~~~~~~~------~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
..++ ...........+ ....+.+++.+|++.||++|||++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 236 PHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred cccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 0000 000000000000 0123668999999999999999999984
No 52
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=6.1e-41 Score=329.43 Aligned_cols=204 Identities=26% Similarity=0.391 Sum_probs=176.8
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|++.+.||+|+||+||++.. .+++.||+|++.............+.+|+.++.+++|+||+++++.+.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 4688899999999999999965 468999999997654433344567889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH---~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~ 154 (363)
T cd05628 81 EFLPGGDMMTLLMKKD---TLTEEETQFYIAETVLAIDSIH---QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKA 154 (363)
T ss_pred cCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCCEEEeeccCccccccc
Confidence 9999999999997643 3889999999999999999999 789999999999999999999999999998754321
Q ss_pred CC-----------------------------------CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCC
Q 012219 329 SS-----------------------------------NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKH 373 (468)
Q Consensus 329 ~~-----------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~ 373 (468)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~ 234 (363)
T cd05628 155 HRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (363)
T ss_pred ccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCC
Confidence 00 0123469999999999999999999999999999999999999
Q ss_pred CCCccc
Q 012219 374 PGELLS 379 (468)
Q Consensus 374 p~~~~~ 379 (468)
||....
T Consensus 235 Pf~~~~ 240 (363)
T cd05628 235 PFCSET 240 (363)
T ss_pred CCCCCC
Confidence 997543
No 53
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2e-41 Score=328.26 Aligned_cols=250 Identities=22% Similarity=0.337 Sum_probs=196.0
Q ss_pred ceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEEEEEEEeccC
Q 012219 176 YCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCMFLIYEYMEM 253 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 253 (468)
+.||+|+||.||+++. .+++.||+|+++..........+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 3699999999999975 46889999999865444434456788999999988 799999999999999999999999999
Q ss_pred CChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCce
Q 012219 254 GSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRT 333 (468)
Q Consensus 254 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 333 (468)
|+|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 g~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~ 154 (329)
T cd05588 81 GDLMFHMQRQR---KLPEEHARFYSAEISLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTS 154 (329)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCccc
Confidence 99998886543 3899999999999999999999 78999999999999999999999999999875332333344
Q ss_pred eccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhc-ccccc-cccC--CCCCCccchhHHH
Q 012219 334 LLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDK-NIKLI-DLLD--PRLSPPVDQKIRQ 409 (468)
Q Consensus 334 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~-~~~~~-~~~~--~~~~~~~~~~~~~ 409 (468)
...||+.|+|||++.+..++.++|||||||++|||+||+.||+........... ..... .... ..++....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~----- 229 (329)
T cd05588 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLS----- 229 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCCC-----
Confidence 567899999999999999999999999999999999999999743221100000 00000 0111 11111111
Q ss_pred HHHHHHHHHHhcccCCCCCCCC------HHHHHHH
Q 012219 410 DIILVSTVAFSCLRSQPKSRPT------MQLVSNE 438 (468)
Q Consensus 410 ~~~~l~~l~~~cl~~dP~~RPs------~~~v~~~ 438 (468)
..+.+++.+|++.||.+||+ +++++++
T Consensus 230 --~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 230 --VKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred --HHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 12667999999999999997 6777643
No 54
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=7.9e-41 Score=314.65 Aligned_cols=262 Identities=23% Similarity=0.306 Sum_probs=207.4
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|+||.||+|+. .+++.||+|.+......+......|.+|+++++.++||||+++++++...+..++++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 4788999999999999999975 478999999886543333344567889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCc-ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 249 EYMEMGSLFCVLRTDE-EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
||+++|+|.+++.... ....+++..++.++.|++.||+||| +.+++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 9999999998886422 2234788899999999999999999 78999999999999999999999999999887653
Q ss_pred CCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
.........++..|+|||.+.+..++.++||||||+++|||++|+.||............. ......+... ..
T Consensus 159 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~---~~-- 231 (267)
T cd08228 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQK--IEQCDYPPLP---TE-- 231 (267)
T ss_pred hhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHH--HhcCCCCCCC---hh--
Confidence 3333334568889999999988889999999999999999999999986432211111110 1111111111 11
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
.....+.+++.+||+.+|++||++.+|++.++..
T Consensus 232 -~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 232 -HYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred -hcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 1112377899999999999999999999999865
No 55
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.9e-41 Score=328.30 Aligned_cols=250 Identities=24% Similarity=0.360 Sum_probs=194.6
Q ss_pred ceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEEEEEEEeccC
Q 012219 176 YCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCMFLIYEYMEM 253 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 253 (468)
+.||+|+||.||+|+. .+++.+|+|+++..........+.+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 3699999999999975 46889999999865443334456678899888776 799999999999999999999999999
Q ss_pred CChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCce
Q 012219 254 GSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRT 333 (468)
Q Consensus 254 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 333 (468)
|+|..++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (329)
T cd05618 81 GDLMFHMQRQR---KLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTS 154 (329)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccc
Confidence 99998886543 3889999999999999999999 78999999999999999999999999999976433333344
Q ss_pred eccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhc-cccccc-cc--CCCCCCccchhHHH
Q 012219 334 LLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDK-NIKLID-LL--DPRLSPPVDQKIRQ 409 (468)
Q Consensus 334 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~-~~~~~~-~~--~~~~~~~~~~~~~~ 409 (468)
...||+.|+|||++.+..++.++|||||||++|||++|+.||............ .....+ .. ...++....
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~----- 229 (329)
T cd05618 155 TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLS----- 229 (329)
T ss_pred cccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCCC-----
Confidence 567899999999999999999999999999999999999999643211100000 000000 01 111111111
Q ss_pred HHHHHHHHHHhcccCCCCCCCC------HHHHHHH
Q 012219 410 DIILVSTVAFSCLRSQPKSRPT------MQLVSNE 438 (468)
Q Consensus 410 ~~~~l~~l~~~cl~~dP~~RPs------~~~v~~~ 438 (468)
..+.+++.+||+.||++||+ +.+++++
T Consensus 230 --~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 230 --VKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred --HHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 12567899999999999998 4676644
No 56
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.2e-41 Score=329.56 Aligned_cols=246 Identities=22% Similarity=0.284 Sum_probs=196.3
Q ss_pred ceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEeccCC
Q 012219 176 YCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYMEMG 254 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 254 (468)
+.||+|+||.||++.. .+++.||+|++.............+.+|++++..++||||+++.+++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 3699999999999974 578999999998654333334567788999999999999999999999999999999999999
Q ss_pred ChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCcee
Q 012219 255 SLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRTL 334 (468)
Q Consensus 255 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 334 (468)
+|..++.... .+++..+..++.||+.||.|||+ ..+|+||||||+|||++.++.+||+|||+++...........
T Consensus 81 ~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH~--~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~ 155 (325)
T cd05594 81 ELFFHLSRER---VFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT 155 (325)
T ss_pred cHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCccccc
Confidence 9998886543 38899999999999999999993 269999999999999999999999999998754333333344
Q ss_pred ccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHH
Q 012219 335 LAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILV 414 (468)
Q Consensus 335 ~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 414 (468)
..|++.|+|||++.+..++.++|||||||++|||+||+.||........... .......+...... .+
T Consensus 156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~-----i~~~~~~~p~~~~~-------~~ 223 (325)
T cd05594 156 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL-----ILMEEIRFPRTLSP-------EA 223 (325)
T ss_pred ccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHH-----HhcCCCCCCCCCCH-------HH
Confidence 5799999999999999999999999999999999999999965332111000 00011111211111 26
Q ss_pred HHHHHhcccCCCCCCC-----CHHHHHHH
Q 012219 415 STVAFSCLRSQPKSRP-----TMQLVSNE 438 (468)
Q Consensus 415 ~~l~~~cl~~dP~~RP-----s~~~v~~~ 438 (468)
.+++.+||+.||++|| ++.+++++
T Consensus 224 ~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 224 KSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred HHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 6789999999999997 89888754
No 57
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.4e-42 Score=327.14 Aligned_cols=253 Identities=25% Similarity=0.341 Sum_probs=212.8
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCE-EEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKC-MFLI 247 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-~~lv 247 (468)
++|...+++|+|+||.++.++. .+++.+++|.+......+.. .+...+|+.++++++|||||.+.+.+..++. .+||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~-r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPE-RRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchh-hHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 5688889999999999999965 46789999999876655433 3467899999999999999999999999888 9999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|+|++||++.+.+...+ ...+++.+++.++.|++.|+.||| +..|+|||||+.|||++.+..|||+|||+|+.+..
T Consensus 83 m~Y~eGg~l~~~i~~~k-~~~f~E~~i~~~~~Q~~~av~ylH---~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQK-GVLFPEERILKWFVQILLAVNYLH---ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNP 158 (426)
T ss_pred EeecCCCCHHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHH---hhhhhcccchhhhhhccccCceeecchhhhhhcCC
Confidence 99999999999998766 455899999999999999999999 78999999999999999999999999999999987
Q ss_pred CCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
+.......+||+.||.||.+.+.+|..|+||||+||++|||++-+++|............ ....-..++..
T Consensus 159 ~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki----~~~~~~Plp~~----- 229 (426)
T KOG0589|consen 159 EDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKI----NRGLYSPLPSM----- 229 (426)
T ss_pred chhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHH----hhccCCCCCcc-----
Confidence 766777789999999999999999999999999999999999999999865443222111 11111111111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
....+..++..|+..+|+.||++.+++..
T Consensus 230 --ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 230 --YSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred --ccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 11226778999999999999999999865
No 58
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.9e-42 Score=330.39 Aligned_cols=253 Identities=23% Similarity=0.345 Sum_probs=207.5
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
.-|.+++.||.|+.|.|-.|++ .+|+.+|||++.....-.........+|+-+|+-+.|||++++++++.+..++|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 4577889999999999999975 579999999998764333333456778999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++|-|++++...+. +.+.++.+++.||..|+.|+| ..+|+||||||+|+|+|..+++||+|||.|..- .+
T Consensus 92 Eyv~gGELFdylv~kG~---l~e~eaa~ff~QIi~gv~yCH---~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe-~~ 164 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRKGP---LPEREAAHFFRQILDGVSYCH---AFNICHRDLKPENLLLDVKNNIKIADFGMASLE-VP 164 (786)
T ss_pred EecCCchhHHHHHhhCC---CCCHHHHHHHHHHHHHHHHHh---hhcceeccCCchhhhhhcccCEeeeccceeecc-cC
Confidence 99999999999987554 899999999999999999999 789999999999999999999999999999653 35
Q ss_pred CCCceeccccccccccccccCCCCC-ccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVT-EKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~-~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
+......+|++.|.|||++.+..|+ .++||||.|||||.|+||+.||++...............++ +.....
T Consensus 165 gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~M-----Ps~Is~-- 237 (786)
T KOG0588|consen 165 GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEM-----PSNISS-- 237 (786)
T ss_pred CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccC-----CCcCCH--
Confidence 5566677999999999999998874 68999999999999999999998543221111111111121 121221
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHh
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIA 441 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~ 441 (468)
...+|+.+|+..||++|.|++||.++-.-
T Consensus 238 -----eaQdLLr~ml~VDp~~RiT~~eI~kHP~l 266 (786)
T KOG0588|consen 238 -----EAQDLLRRMLDVDPSTRITTEEILKHPFL 266 (786)
T ss_pred -----HHHHHHHHHhccCccccccHHHHhhCchh
Confidence 15568899999999999999999976543
No 59
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=5.9e-41 Score=318.35 Aligned_cols=256 Identities=24% Similarity=0.423 Sum_probs=202.2
Q ss_pred hCccccceeeeeCCceEEEEEcCC------CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPS------GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKC 243 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 243 (468)
++|++.+.||+|+||.||+|.... ...||+|.+...... .....|.+|++++.+++||||+++++++.....
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~--~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~ 82 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEP--KVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQP 82 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCH--HHHHHHHHHHHHHHhcCCcccceEEEEEcCCCc
Confidence 468889999999999999997532 257999998755432 234678899999999999999999999999889
Q ss_pred EEEEEEeccCCChhhhhhcCcc-------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC
Q 012219 244 MFLIYEYMEMGSLFCVLRTDEE-------------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS 310 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~ 310 (468)
.+++|||+++|+|.+++..... ...+++...+.++.|++.||+||| +.+++|+||||+||++++
T Consensus 83 ~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nil~~~ 159 (283)
T cd05048 83 TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS---SHHFVHRDLAARNCLVGE 159 (283)
T ss_pred eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccccceEEEcC
Confidence 9999999999999999875321 134788999999999999999999 789999999999999999
Q ss_pred CCCeEEeeccccccccCCCC--CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhc
Q 012219 311 ELEAFVADFGVARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDK 387 (468)
Q Consensus 311 ~~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~ 387 (468)
++.++|+|||+++....... ......+++.|+|||++.+..++.++|||||||++|||++ |..||.........
T Consensus 160 ~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~--- 236 (283)
T cd05048 160 GLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVI--- 236 (283)
T ss_pred CCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHH---
Confidence 99999999999976532221 1223346788999999988899999999999999999998 99998754321110
Q ss_pred ccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHh
Q 012219 388 NIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIA 441 (468)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~ 441 (468)
..+.......... .....+.+++.+||+.||.+||++++|.+.|+.
T Consensus 237 -----~~i~~~~~~~~~~---~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 237 -----EMIRSRQLLPCPE---DCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred -----HHHHcCCcCCCcc---cCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 1111111111111 112237789999999999999999999999874
No 60
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=4.2e-41 Score=329.39 Aligned_cols=250 Identities=26% Similarity=0.374 Sum_probs=192.9
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|+..+.||+|+||.||+|.. .+++.||+|++...... ...+.+.+|+++++.++|+||+++++++...+..++||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 151 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHED--TVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLL 151 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcH--HHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEE
Confidence 3466678899999999999975 46899999999654332 23467889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++|+|.... ...+..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++.+...
T Consensus 152 e~~~~~~L~~~~-------~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~ 221 (353)
T PLN00034 152 EFMDGGSLEGTH-------IADEQFLADVARQILSGIAYLH---RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQT 221 (353)
T ss_pred ecCCCCcccccc-------cCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEcccccceecccc
Confidence 999999986532 2456778889999999999999 789999999999999999999999999999876533
Q ss_pred CCCceeccccccccccccccC-----CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCcc
Q 012219 329 SSNRTLLAGTYGYIAPELAYT-----MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPV 403 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (468)
........|+..|+|||++.. ...+.++|||||||++|||++|+.||.......+..... .......+......
T Consensus 222 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 300 (353)
T PLN00034 222 MDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMC-AICMSQPPEAPATA 300 (353)
T ss_pred cccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHH-HHhccCCCCCCCcc
Confidence 333344578999999998743 234568999999999999999999997432222211100 00000011111111
Q ss_pred chhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 404 DQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 404 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
. ..+.+++.+||+.||++||++.|++++-
T Consensus 301 ~-------~~l~~li~~~l~~~P~~Rpt~~ell~hp 329 (353)
T PLN00034 301 S-------REFRHFISCCLQREPAKRWSAMQLLQHP 329 (353)
T ss_pred C-------HHHHHHHHHHccCChhhCcCHHHHhcCc
Confidence 1 2267899999999999999999998653
No 61
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=4e-41 Score=320.30 Aligned_cols=261 Identities=22% Similarity=0.264 Sum_probs=196.9
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|+||.||+|.. .+++.||+|+++..... .....+.+|++++++++||||+++++++...+..++||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 82 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE--GAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVF 82 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC--CcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence 5688899999999999999975 46899999998754322 12346778999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++ +|.+++..... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 83 e~~~~-~l~~~l~~~~~--~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~ 156 (288)
T cd07871 83 EYLDS-DLKQYLDNCGN--LMSMHNVKIFMFQLLRGLSYCH---KRKILHRDLKPQNLLINEKGELKLADFGLARAKSVP 156 (288)
T ss_pred eCCCc-CHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEECcCcceeeccCC
Confidence 99975 89888865432 3788899999999999999999 789999999999999999999999999999765433
Q ss_pred CCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhh-----------------cccc
Q 012219 329 SSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLD-----------------KNIK 390 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~-----------------~~~~ 390 (468)
........+++.|+|||++.+ ..++.++||||+||++|||+||+.||........... ....
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T cd07871 157 TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEE 236 (288)
T ss_pred CccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchh
Confidence 333344568899999998865 5689999999999999999999999864332110000 0000
Q ss_pred cccccCCCCCCc-cchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 391 LIDLLDPRLSPP-VDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 391 ~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
......+..... .............+++.+|++.||.+|||++|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 237 FRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred hhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000011110000 000000001125689999999999999999999853
No 62
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=6.6e-41 Score=313.24 Aligned_cols=250 Identities=27% Similarity=0.450 Sum_probs=200.0
Q ss_pred hCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
++|++.+.||+|+||.||++++.++..+|+|.+...... .+.|.+|++++++++||||+++++++......++|||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e 79 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAMS----EEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTE 79 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCcc----HHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEE
Confidence 468888999999999999999888889999988754332 3568899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|+++|+|.++++.... .+++..++.++.|++.||.||| +.+++|+||||+||+++.++.+||+|||.++......
T Consensus 80 ~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05114 80 FMENGCLLNYLRQRQG--KLSKDMLLSMCQDVCEGMEYLE---RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDE 154 (256)
T ss_pred cCCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcceEEEcCCCeEEECCCCCccccCCCc
Confidence 9999999999875432 3889999999999999999999 7799999999999999999999999999987653221
Q ss_pred CC-ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 330 SN-RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 330 ~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
.. .....++..|+|||+..+..++.++||||||+++|||++ |+.||........... .........+.. .
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~-i~~~~~~~~~~~---~---- 226 (256)
T cd05114 155 YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEM-ISRGFRLYRPKL---A---- 226 (256)
T ss_pred eeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-HHCCCCCCCCCC---C----
Confidence 11 112234568999999988889999999999999999999 9999875432211111 000000001111 1
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
...+.+++.+||+.+|++||+++++++.|
T Consensus 227 ---~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 227 ---SMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred ---CHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 12367899999999999999999999876
No 63
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.4e-41 Score=332.80 Aligned_cols=254 Identities=26% Similarity=0.371 Sum_probs=203.1
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|+||.||+|+.. +++.||+|++.............+.+|++++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 36888999999999999999764 78999999998654433345567889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++|+|.+++... ..+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~l~~~---~~l~~~~~~~i~~qi~~aL~~LH---~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 154 (350)
T cd05573 81 EYMPGGDLMNLLIRK---DVFPEETARFYIAELVLALDSVH---KLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKA 154 (350)
T ss_pred cCCCCCCHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEeecCCCCccCccc
Confidence 999999999999765 34889999999999999999999 789999999999999999999999999999876433
Q ss_pred C-----------------------------CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCccc
Q 012219 329 S-----------------------------SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLS 379 (468)
Q Consensus 329 ~-----------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~ 379 (468)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~ 234 (350)
T cd05573 155 KDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT 234 (350)
T ss_pred CcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC
Confidence 2 12233568999999999999999999999999999999999999997544
Q ss_pred ccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCC-HHHHHHH
Q 012219 380 SSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPT-MQLVSNE 438 (468)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-~~~v~~~ 438 (468)
...... .+.... .....+....... .+.+++.+|+. ||.+||+ +++++++
T Consensus 235 ~~~~~~----~i~~~~-~~~~~p~~~~~~~---~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 235 LQETYN----KIINWK-ESLRFPPDPPVSP---EAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred HHHHHH----HHhccC-CcccCCCCCCCCH---HHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 211110 001100 0000000000111 26678889997 9999999 9999965
No 64
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=3.6e-41 Score=325.80 Aligned_cols=245 Identities=25% Similarity=0.366 Sum_probs=194.8
Q ss_pred ceeeeeCCceEEEEEc----CCCCEEEEEEecCcchh-hhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEe
Q 012219 176 YCIGTGGYGSVYRARL----PSGKVVALKKLHRSETE-ELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEY 250 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (468)
+.||+|+||.||+++. .+++.||+|+++..... .......+.+|+++++.++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999974 36789999999764321 122345678899999999999999999999999999999999
Q ss_pred ccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCC
Q 012219 251 MEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSS 330 (468)
Q Consensus 251 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 330 (468)
+++|+|.+++.... .+.+..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 155 (323)
T cd05584 82 LSGGELFMHLEREG---IFMEDTACFYLSEISLALEHLH---QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT 155 (323)
T ss_pred CCCchHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC
Confidence 99999999987543 3778888899999999999999 78999999999999999999999999999875433333
Q ss_pred CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHH
Q 012219 331 NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQD 410 (468)
Q Consensus 331 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (468)
......|++.|+|||++.+..++.++|||||||++|||++|+.||........ ...... ....+..... .
T Consensus 156 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~-~~~~~~----~~~~~~~~~~----~- 225 (323)
T cd05584 156 VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKT-IDKILK----GKLNLPPYLT----P- 225 (323)
T ss_pred cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHH-HHHHHc----CCCCCCCCCC----H-
Confidence 33445789999999999988899999999999999999999999975432111 110000 0111111111 1
Q ss_pred HHHHHHHHHhcccCCCCCCC-----CHHHHHHH
Q 012219 411 IILVSTVAFSCLRSQPKSRP-----TMQLVSNE 438 (468)
Q Consensus 411 ~~~l~~l~~~cl~~dP~~RP-----s~~~v~~~ 438 (468)
.+.+++.+||+.||++|| ++++++++
T Consensus 226 --~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 226 --EARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred --HHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 266799999999999999 78888753
No 65
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=7.1e-41 Score=322.90 Aligned_cols=257 Identities=24% Similarity=0.397 Sum_probs=201.1
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCC----EEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGK----VVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCM 244 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 244 (468)
.+|+..+.||+|+||.||+|.+. ++. .||+|+++..... ...+.|.+|+.+++.++||||++++|+|... ..
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~ 83 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSP--KANKEILDEAYVMASVDNPHVCRLLGICLTS-TV 83 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Cc
Confidence 46889999999999999999753 333 4899998754322 2346788999999999999999999999875 46
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
++++||+++|+|.+++..... .+++...+.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 84 ~~v~e~~~~g~l~~~l~~~~~--~~~~~~~~~~~~qi~~~L~~LH---~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~ 158 (316)
T cd05108 84 QLITQLMPFGCLLDYVREHKD--NIGSQYLLNWCVQIAKGMNYLE---ERRLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (316)
T ss_pred eeeeecCCCCCHHHHHHhccc--cCCHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEecCCCcEEEcccccccc
Confidence 799999999999999986542 3788999999999999999999 78999999999999999999999999999987
Q ss_pred ccCCCCCce--eccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 325 LNFDSSNRT--LLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 325 ~~~~~~~~~--~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
......... ...++..|+|||++....++.++|||||||++|||++ |+.||+............ .........
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~----~~~~~~~~~ 234 (316)
T cd05108 159 LGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILE----KGERLPQPP 234 (316)
T ss_pred ccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHh----CCCCCCCCC
Confidence 653322211 1234568999999999999999999999999999998 999987543322111000 000000111
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
.. ...+.+++.+||+.+|++||++.+++..+......
T Consensus 235 ~~-------~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~ 271 (316)
T cd05108 235 IC-------TIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 271 (316)
T ss_pred CC-------CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence 11 12267799999999999999999999998877654
No 66
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=3.8e-41 Score=325.83 Aligned_cols=248 Identities=24% Similarity=0.335 Sum_probs=194.5
Q ss_pred ccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHH---hhccCCceeeEEEEEeeCCEEEEE
Q 012219 172 FHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLL---SQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 172 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l---~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
|.+.+.||+|+||.||+|.. .+++.||||+++..........+.+.+|++++ +.++||||+++++++...+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 56778999999999999975 46899999999865433333345566666654 567899999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|||+++|+|...+... .+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 ~E~~~~~~L~~~~~~~----~l~~~~~~~~~~qi~~al~~lH---~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05589 81 MEYAAGGDLMMHIHTD----VFSEPRAVFYAACVVLGLQYLH---ENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG 153 (324)
T ss_pred EcCCCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeEecCCCHHHeEECCCCcEEeCcccCCccCCC
Confidence 9999999999887642 3899999999999999999999 78999999999999999999999999999875433
Q ss_pred CCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
.........|++.|+|||++.+..++.++|||||||++|||++|+.||........... . .. .........+
T Consensus 154 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~-i---~~-~~~~~p~~~~--- 225 (324)
T cd05589 154 FGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDS-I---VN-DEVRYPRFLS--- 225 (324)
T ss_pred CCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHH-H---Hh-CCCCCCCCCC---
Confidence 33334456789999999999999999999999999999999999999975432111100 0 00 0111111111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCC-----CHHHHHHH
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRP-----TMQLVSNE 438 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RP-----s~~~v~~~ 438 (468)
. .+.+++.+||+.||++|| ++.+++++
T Consensus 226 -~---~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 226 -R---EAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred -H---HHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 1 256789999999999999 46666653
No 67
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=7.5e-41 Score=313.77 Aligned_cols=254 Identities=25% Similarity=0.397 Sum_probs=203.7
Q ss_pred hhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
.++|++.+.||+|+||.||+|...++..||+|.+...... .+.+.+|+.++++++|+||+++++++...+..++++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMS----VQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT 80 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCchh----HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEE
Confidence 3578999999999999999999888889999998754332 467889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++|+|.+++.... ...+++.+++.++.|++.||+||| +.+++||||||+||+++.++.++|+|||+++.....
T Consensus 81 e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05072 81 EYMAKGSLLDFLKSDE-GGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDN 156 (261)
T ss_pred ecCCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEecCCCcEEECCCccceecCCC
Confidence 9999999999987543 234788999999999999999999 789999999999999999999999999999876432
Q ss_pred CC-CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchh
Q 012219 329 SS-NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQK 406 (468)
Q Consensus 329 ~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (468)
.. ......++..|+|||+.....++.++|||||||++|+|+| |+.||........... .............+
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~-- 230 (261)
T cd05072 157 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSA----LQRGYRMPRMENCP-- 230 (261)
T ss_pred ceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHH----HHcCCCCCCCCCCC--
Confidence 21 1122335678999999988889999999999999999998 9999864332111110 00111111111111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHh
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIA 441 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~ 441 (468)
..+.+++.+|++.+|++||+++++.+.|++
T Consensus 231 -----~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 231 -----DELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred -----HHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 226789999999999999999999998864
No 68
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=4.6e-41 Score=325.27 Aligned_cols=249 Identities=21% Similarity=0.326 Sum_probs=197.2
Q ss_pred CccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCC-ceeeEEEEEeeCCEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHR-NIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~-niv~l~~~~~~~~~~~lv~ 248 (468)
+|++.+.||+|+||.||+|... +++.||+|++...........+.+..|.+++..++|+ +|+++++++...+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4788899999999999999754 5789999999865433333456788899999999765 6888999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05587 81 EYVNGGDLMYHIQQVG---KFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG 154 (324)
T ss_pred cCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC
Confidence 9999999999987543 3788999999999999999999 789999999999999999999999999998754333
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
........|++.|+|||++.+..++.++|||||||++|||+||+.||........... ... ....+.....
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~----i~~-~~~~~~~~~~---- 225 (324)
T cd05587 155 GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQS----IME-HNVSYPKSLS---- 225 (324)
T ss_pred CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHH----HHc-CCCCCCCCCC----
Confidence 3334456799999999999999999999999999999999999999975432111100 000 0111111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCH-----HHHHH
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPTM-----QLVSN 437 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs~-----~~v~~ 437 (468)
. .+.+++.+||+.||++||+. +++.+
T Consensus 226 ~---~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 256 (324)
T cd05587 226 K---EAVSICKGLLTKHPAKRLGCGPTGERDIRE 256 (324)
T ss_pred H---HHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 1 25678999999999999986 56654
No 69
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.1e-40 Score=313.60 Aligned_cols=262 Identities=24% Similarity=0.327 Sum_probs=209.4
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|++.+.||+|+||.||++.. .+++.+|||.+......+....+.+.+|+++++.++|+||+++++++..++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4678889999999999999974 588999999887654444445578899999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCc-ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 249 EYMEMGSLFCVLRTDE-EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
||+++++|.+++.... ....+++..++.++.||+.||.||| +.+++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 9999999999886422 2345899999999999999999999 78999999999999999999999999999877654
Q ss_pred CCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
.........++..|+|||+..+..++.++||||||+++|+|++|..||............ .......+.... ..
T Consensus 159 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~--~~~~~~~~~~~~---~~- 232 (267)
T cd08229 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK--KIEQCDYPPLPS---DH- 232 (267)
T ss_pred CCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhh--hhhcCCCCCCCc---cc-
Confidence 333333456888999999998888999999999999999999999998643322111111 111111111111 11
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
....+.+++.+||+.||++||||.+|++.+.+.
T Consensus 233 --~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 233 --YSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred --ccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 112377899999999999999999999998765
No 70
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-42 Score=294.43 Aligned_cols=261 Identities=25% Similarity=0.379 Sum_probs=205.3
Q ss_pred hhCccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC-----
Q 012219 169 TEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK----- 242 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 242 (468)
.++|.+.+.||+|||+-||.+. ..++..+|+|++...... ..+..++|++..++++|||++++++++..+.
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~---~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~ 96 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQE---DIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKH 96 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchH---HHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCce
Confidence 4689999999999999999996 678899999999877643 3567789999999999999999999886543
Q ss_pred EEEEEEEeccCCChhhhhhcCcc-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccc
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEE-AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGV 321 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 321 (468)
+.|++++|...|+|.+.+..... ...+++.+.+.|+.+|++||++||.. .++++||||||.||++++++.+++.|||.
T Consensus 97 ~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS 175 (302)
T KOG2345|consen 97 EAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGS 175 (302)
T ss_pred eEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccC
Confidence 48999999999999999876432 33589999999999999999999943 34599999999999999999999999999
Q ss_pred cccccCCCCC---------ceecccccccccccccc---CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccc
Q 012219 322 ARLLNFDSSN---------RTLLAGTYGYIAPELAY---TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNI 389 (468)
Q Consensus 322 ~~~~~~~~~~---------~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~ 389 (468)
++...-.-.. ......|..|+|||.+. +...++++|||||||++|+|+.|..||+..-....+.....
T Consensus 176 ~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv 255 (302)
T KOG2345|consen 176 ATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAV 255 (302)
T ss_pred ccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEee
Confidence 8765321111 11234688999999885 45688999999999999999999999986543322222111
Q ss_pred ccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHh
Q 012219 390 KLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIA 441 (468)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~ 441 (468)
. .+.+..+......+ .+.+++.+|++.||.+||++.+++..+..
T Consensus 256 ~-----n~q~s~P~~~~yse---~l~~lik~mlqvdP~qRP~i~~ll~~~d~ 299 (302)
T KOG2345|consen 256 Q-----NAQISIPNSSRYSE---ALHQLIKSMLQVDPNQRPTIPELLSKLDD 299 (302)
T ss_pred e-----ccccccCCCCCccH---HHHHHHHHHhcCCcccCCCHHHHHHHHHh
Confidence 1 11222111111222 27789999999999999999999988764
No 71
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5e-41 Score=314.10 Aligned_cols=263 Identities=25% Similarity=0.446 Sum_probs=198.6
Q ss_pred hCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhh--ccCCceeeEEEEEeeCC----E
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQ--IRHRNIVKLYGFCLHRK----C 243 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~----~ 243 (468)
....+.+.||+|+||.||||.+. ++.||||++.... .+.|.+|-++.+. ++|+||+++++.-.... .
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~~------kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~e 282 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQE------KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRME 282 (534)
T ss_pred CchhhHHHhhcCccceeehhhcc-CceeEEEecCHHH------HHHHHhHHHHHhccCccchhHHHhhchhccCCccccc
Confidence 44556778999999999999994 5999999997543 4578888888875 58999999999876554 7
Q ss_pred EEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhc------CCCCeEecCCCCCceeeCCCCCeEEe
Q 012219 244 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHD------CTPPIVHRDISSNNVLLNSELEAFVA 317 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~------~~~~ivH~dlk~~NIll~~~~~~kl~ 317 (468)
++||+||.+.|+|.++|..+- ++|....+|+..+++||+|||.+ ++++|+|||||++|||+.+|+++.|+
T Consensus 283 ywLVt~fh~kGsL~dyL~~nt----isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIa 358 (534)
T KOG3653|consen 283 YWLVTEFHPKGSLCDYLKANT----ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIA 358 (534)
T ss_pred eeEEeeeccCCcHHHHHHhcc----ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEee
Confidence 999999999999999998654 89999999999999999999964 36789999999999999999999999
Q ss_pred eccccccccCCCCC--ceeccccccccccccccCCC-C-----CccchhhHHHHHHHHHHhCCCCCCc--cc------cc
Q 012219 318 DFGVARLLNFDSSN--RTLLAGTYGYIAPELAYTMV-V-----TEKCDVYSFGVVALEVLMGKHPGEL--LS------SS 381 (468)
Q Consensus 318 Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~-~-----~~~~Dv~s~Gvil~el~tg~~p~~~--~~------~~ 381 (468)
|||+|..+...... ....+||.+|||||++.+.. + -.+.||||+|.+||||+++-.-++. .+ ..
T Consensus 359 DFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ 438 (534)
T KOG3653|consen 359 DFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEA 438 (534)
T ss_pred ccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhH
Confidence 99999887643322 22368999999999997642 2 2368999999999999986543321 00 00
Q ss_pred ----chhhh--cccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 382 ----SWSLD--KNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 382 ----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
.-..+ +.....+...|.++...... ..+..+.+.+..||..||+.|.|+.=|.+.+.+....
T Consensus 439 evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h--~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~ 506 (534)
T KOG3653|consen 439 EVGNHPTLEEMQELVVRKKQRPKIPDAWRKH--AGMAVLCETIEECWDHDAEARLTAGCVEERMAELMML 506 (534)
T ss_pred HhcCCCCHHHHHHHHHhhccCCCChhhhhcC--ccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhcc
Confidence 00000 01111122223333222222 3445588999999999999999998888777666543
No 72
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=2.4e-40 Score=311.22 Aligned_cols=263 Identities=24% Similarity=0.328 Sum_probs=209.6
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|++.+.||+|+||.||+|... +|+.||+|.++..........+.+.+|++++++++|+|++++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57889999999999999999765 78999999887544333334567889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCc-ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 249 EYMEMGSLFCVLRTDE-EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
||+++|+|..++.... ....+++.+++.++.+++.||.||| +.+++||||+|+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH---SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 9999999999886532 2345889999999999999999999 78999999999999999999999999999876644
Q ss_pred CCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
.........++..|+|||.+.+..++.++|||||||++|+|++|+.||............ .......+.... .
T Consensus 159 ~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~--~~~~~~~~~~~~---~-- 231 (267)
T cd08224 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCK--KIEKCDYPPLPA---D-- 231 (267)
T ss_pred CCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHh--hhhcCCCCCCCh---h--
Confidence 333334456888999999998888999999999999999999999998643321111110 000000011110 0
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
.....+.+++.+||..+|++|||+.++++.|..+.
T Consensus 232 -~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 232 -HYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred -hcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 11123678999999999999999999999998763
No 73
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=3.2e-41 Score=316.22 Aligned_cols=256 Identities=26% Similarity=0.452 Sum_probs=207.2
Q ss_pred HhhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
...+|++.+.||+|+||.||+|...+++.+++|.+...... ....+..|+.+++.++|+||+++++++......++|
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLL---KQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYII 80 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchh---hHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEE
Confidence 34678889999999999999999888999999999765542 245688999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|||+++|+|.+++.... ...+++.+++.++.|++.||.||| +.+++|+||+|+||++++++.+||+|||.+.....
T Consensus 81 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH---~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~ 156 (261)
T cd05148 81 TELMEKGSLLAFLRSPE-GQVLPVASLIDMACQVAEGMAYLE---EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKE 156 (261)
T ss_pred EeecccCCHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccCcceEEEcCCceEEEccccchhhcCC
Confidence 99999999999997643 234899999999999999999999 78999999999999999999999999999977643
Q ss_pred CCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchh
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQK 406 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (468)
.........++..|+|||......++.++||||||+++|+|++ |+.||......... .. ..............
T Consensus 157 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~-~~---~~~~~~~~~~~~~~-- 230 (261)
T cd05148 157 DVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVY-DQ---ITAGYRMPCPAKCP-- 230 (261)
T ss_pred ccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHH-HH---HHhCCcCCCCCCCC--
Confidence 3222233345678999999988889999999999999999998 89998754321111 10 00111111111111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHh
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIA 441 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~ 441 (468)
..+.+++.+||+.||++|||+.++.+.|+.
T Consensus 231 -----~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 231 -----QEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred -----HHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 226789999999999999999999999875
No 74
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=3.1e-41 Score=325.70 Aligned_cols=239 Identities=26% Similarity=0.371 Sum_probs=191.3
Q ss_pred ceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEEEEEEEeccC
Q 012219 176 YCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCMFLIYEYMEM 253 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 253 (468)
+.||+|+||.||+|... +++.||+|++...........+.+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999754 6889999999765433333456677888888876 699999999999999999999999999
Q ss_pred CChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCce
Q 012219 254 GSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRT 333 (468)
Q Consensus 254 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 333 (468)
|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 g~L~~~i~~~~---~l~~~~~~~~~~ql~~~L~~lH---~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (320)
T cd05590 81 GDLMFHIQKSR---RFDEARARFYAAEITSALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTS 154 (320)
T ss_pred chHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCccc
Confidence 99999887543 3889999999999999999999 78999999999999999999999999999876433333444
Q ss_pred eccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHH
Q 012219 334 LLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIIL 413 (468)
Q Consensus 334 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (468)
...|++.|+|||++.+..++.++|||||||++|||++|+.||........... ... . ......... . .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~-i~~-~---~~~~~~~~~----~---~ 222 (320)
T cd05590 155 TFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEA-ILN-D---EVVYPTWLS----Q---D 222 (320)
T ss_pred ccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHH-Hhc-C---CCCCCCCCC----H---H
Confidence 56799999999999988999999999999999999999999975432211100 000 0 011111111 1 2
Q ss_pred HHHHHHhcccCCCCCCCCH
Q 012219 414 VSTVAFSCLRSQPKSRPTM 432 (468)
Q Consensus 414 l~~l~~~cl~~dP~~RPs~ 432 (468)
+.+++.+|++.||++||++
T Consensus 223 ~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 223 AVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred HHHHHHHHcccCHHHCCCC
Confidence 5678999999999999998
No 75
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.1e-40 Score=316.65 Aligned_cols=255 Identities=22% Similarity=0.273 Sum_probs=200.3
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
.|++.+.||+|+||.||++.. .+++.||+|++.............+.+|++++++++|+||+++++++..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 367788999999999999975 4689999999976544333334567789999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|+++|+|.+++.... ...+++..+..++.|++.||.||| +.+++||||||+||++++++.++|+|||++......
T Consensus 81 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~- 155 (285)
T cd05605 81 LMNGGDLKFHIYNMG-NPGFDEERAVFYAAEITCGLEDLH---RERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG- 155 (285)
T ss_pred ccCCCcHHHHHHhcC-cCCCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC-
Confidence 999999998886533 234899999999999999999999 779999999999999999999999999999775422
Q ss_pred CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHH
Q 012219 330 SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQ 409 (468)
Q Consensus 330 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (468)
.......|+..|+|||++.+..++.++||||+||++|||++|+.||.................. .........
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~------ 228 (285)
T cd05605 156 ETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKE-DQEEYSEKF------ 228 (285)
T ss_pred CccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhh-cccccCccc------
Confidence 2223346899999999999888999999999999999999999999754321110000000000 011111111
Q ss_pred HHHHHHHHHHhcccCCCCCCC-----CHHHHHHH
Q 012219 410 DIILVSTVAFSCLRSQPKSRP-----TMQLVSNE 438 (468)
Q Consensus 410 ~~~~l~~l~~~cl~~dP~~RP-----s~~~v~~~ 438 (468)
...+.+++.+||+.||++|| ++++++++
T Consensus 229 -~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 229 -SEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred -CHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 12266799999999999999 78888654
No 76
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=6.3e-41 Score=324.18 Aligned_cols=249 Identities=22% Similarity=0.331 Sum_probs=197.2
Q ss_pred CccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 248 (468)
+|.+.+.||+|+||.||+|... +++.||+|++...........+.+..|..++..+ +|++|+++.+++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4778899999999999999754 5789999999865433333445667788888777 5899999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++|+|.+.+.... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 81 E~~~~g~L~~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~ 154 (323)
T cd05616 81 EYVNGGDLMYQIQQVG---RFKEPHAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD 154 (323)
T ss_pred cCCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCEEecCCCHHHeEECCCCcEEEccCCCceecCCC
Confidence 9999999999886543 3889999999999999999999 789999999999999999999999999999764433
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
........||+.|+|||++.+..++.++|||||||++|||+||+.||.......... . +.+ ....+.....
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~-~---i~~-~~~~~p~~~s---- 225 (323)
T cd05616 155 GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ-S---IME-HNVAYPKSMS---- 225 (323)
T ss_pred CCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHH-H---HHh-CCCCCCCcCC----
Confidence 333445678999999999999999999999999999999999999997543221110 0 000 0111111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCH-----HHHHH
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPTM-----QLVSN 437 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs~-----~~v~~ 437 (468)
. .+.+++.+|++.||++|++. .++.+
T Consensus 226 ~---~~~~li~~~l~~~p~~R~~~~~~~~~~i~~ 256 (323)
T cd05616 226 K---EAVAICKGLMTKHPGKRLGCGPEGERDIKE 256 (323)
T ss_pred H---HHHHHHHHHcccCHHhcCCCCCCCHHHHhc
Confidence 1 25678999999999999984 56654
No 77
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=8.8e-41 Score=330.37 Aligned_cols=254 Identities=21% Similarity=0.330 Sum_probs=195.9
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
.|...+.||+|+||+||+|+. .+++.||+|++...........+.+.+|++++.+++|+||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 578889999999999999964 5688999999976554433456778999999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|+++|+|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~aL~~LH---~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~ 155 (381)
T cd05626 82 YIPGGDMMSLLIRME---VFPEVLARFYIAELTLAIESVH---KMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTH 155 (381)
T ss_pred cCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccc
Confidence 999999999987643 3788888999999999999999 7899999999999999999999999999975431100
Q ss_pred C-----------------------------------------------CceeccccccccccccccCCCCCccchhhHHH
Q 012219 330 S-----------------------------------------------NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFG 362 (468)
Q Consensus 330 ~-----------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G 362 (468)
. ......||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (381)
T cd05626 156 NSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVG 235 (381)
T ss_pred ccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehh
Confidence 0 01124689999999999988899999999999
Q ss_pred HHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHh--cccCCCCCCCCHHHHHHH
Q 012219 363 VVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFS--CLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 363 vil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~--cl~~dP~~RPs~~~v~~~ 438 (468)
|++|||+||+.||............ ..... ....... ..... .+.+++.+ |+..+|..||++++++++
T Consensus 236 ~il~elltG~~Pf~~~~~~~~~~~i-~~~~~--~~~~~~~--~~~s~---~~~dli~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 236 VILFEMLVGQPPFLAPTPTETQLKV-INWEN--TLHIPPQ--VKLSP---EAVDLITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred hHHHHHHhCCCCCcCCCHHHHHHHH-Hcccc--ccCCCCC--CCCCH---HHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 9999999999999754321111100 00000 0011110 00111 14456655 556677779999999865
No 78
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=4e-41 Score=327.89 Aligned_cols=260 Identities=28% Similarity=0.376 Sum_probs=193.1
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC-----CEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR-----KCM 244 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~ 244 (468)
+|++.+.||+|+||.||+|.. .+++.||+|++...... ......+.+|++++++++||||+++++++... ...
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 79 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEH-VSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDI 79 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhcc-chhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceE
Confidence 477889999999999999975 47899999998743221 12345688999999999999999999988643 247
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
++||||+. ++|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++.
T Consensus 80 ~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~ 152 (338)
T cd07859 80 YVVFELME-SDLHQVIKAND---DLTPEHHQFFLYQLLRALKYIH---TANVFHRDLKPKNILANADCKLKICDFGLARV 152 (338)
T ss_pred EEEEecCC-CCHHHHHHhcc---cCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEccCccccc
Confidence 99999995 68988886543 3899999999999999999999 78999999999999999999999999999976
Q ss_pred ccCCCC---CceeccccccccccccccC--CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhh--------------
Q 012219 325 LNFDSS---NRTLLAGTYGYIAPELAYT--MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSL-------------- 385 (468)
Q Consensus 325 ~~~~~~---~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~-------------- 385 (468)
...... ......|++.|+|||++.+ ..++.++|||||||++|||+||+.||..........
T Consensus 153 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 232 (338)
T cd07859 153 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETI 232 (338)
T ss_pred cccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 532211 1233568999999999865 678999999999999999999999986433210000
Q ss_pred -----hcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 386 -----DKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 386 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.........+..................+.+++.+||+.||++|||+++++++
T Consensus 233 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 233 SRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 00000000000001110000000111236789999999999999999999944
No 79
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=5.1e-41 Score=319.21 Aligned_cols=255 Identities=24% Similarity=0.349 Sum_probs=204.6
Q ss_pred HhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEE
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (468)
..++|++...||+|+||.||.|+. .+|..+|+|++++...-...+++....|-.+|...++|.||+++-.|++...+||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 357899999999999999999964 5799999999999988888888899999999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccccc
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLN 326 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 326 (468)
||||++||++..+|...+. +++..+...+.+++-|+..+| ..|||||||||+|+|+|..|++||+|||++.-+.
T Consensus 219 iMEylPGGD~mTLL~~~~~---L~e~~arfYiaE~vlAI~~iH---~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~ 292 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRKDT---LTEDWARFYIAETVLAIESIH---QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD 292 (550)
T ss_pred EEEecCCccHHHHHHhcCc---CchHHHHHHHHHHHHHHHHHH---HcCcccccCChhheeecCCCCEeeccccccchhh
Confidence 9999999999999976543 888888999999999999999 7899999999999999999999999999985431
Q ss_pred C-----------------------CCC-----Cc-------------------eeccccccccccccccCCCCCccchhh
Q 012219 327 F-----------------------DSS-----NR-------------------TLLAGTYGYIAPELAYTMVVTEKCDVY 359 (468)
Q Consensus 327 ~-----------------------~~~-----~~-------------------~~~~g~~~y~aPE~~~~~~~~~~~Dv~ 359 (468)
. +.. .. ...+|||-|+|||++.+..|+..+|.|
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW 372 (550)
T KOG0605|consen 293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW 372 (550)
T ss_pred hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence 1 000 00 124699999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCC---HHHHH
Q 012219 360 SFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPT---MQLVS 436 (468)
Q Consensus 360 s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs---~~~v~ 436 (468)
|+|||+|||+.|.+||........- .........+...-..... .+-.++|.+|+. ||++|.. ++||.
T Consensus 373 SLG~ImyEmLvGyPPF~s~tp~~T~-rkI~nwr~~l~fP~~~~~s-------~eA~DLI~rll~-d~~~RLG~~G~~EIK 443 (550)
T KOG0605|consen 373 SLGCIMYEMLVGYPPFCSETPQETY-RKIVNWRETLKFPEEVDLS-------DEAKDLITRLLC-DPENRLGSKGAEEIK 443 (550)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHH-HHHHHHhhhccCCCcCccc-------HHHHHHHHHHhc-CHHHhcCcccHHHHh
Confidence 9999999999999999754322110 0111111111111111111 224568888998 9999975 67777
Q ss_pred H
Q 012219 437 N 437 (468)
Q Consensus 437 ~ 437 (468)
.
T Consensus 444 ~ 444 (550)
T KOG0605|consen 444 K 444 (550)
T ss_pred c
Confidence 4
No 80
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.3e-40 Score=312.09 Aligned_cols=254 Identities=23% Similarity=0.400 Sum_probs=203.5
Q ss_pred hhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
.++|++.+.||+|++|.||+|...+++.||+|.++..... .+.|.+|++++++++|+||+++++++...+..+++|
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMD----PKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT 80 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCccc----HHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeee
Confidence 4568889999999999999998878889999998764432 356889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++++|.+++.... ...+++..+..++.|++.|+.||| +.+++||||||+||+++.++.++|+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05068 81 ELMKYGSLLEYLQGGA-GRALKLPQLIDMAAQVASGMAYLE---AQNYIHRDLAARNVLVGENNICKVADFGLARVIKED 156 (261)
T ss_pred ecccCCcHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCcceEEEcCCCCEEECCcceEEEccCC
Confidence 9999999999997644 334899999999999999999999 789999999999999999999999999999876522
Q ss_pred CCCce-eccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchh
Q 012219 329 SSNRT-LLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQK 406 (468)
Q Consensus 329 ~~~~~-~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (468)
..... ....+..|+|||+..+..++.++||||||+++|||+| |+.||........... . ............
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~-~---~~~~~~~~~~~~--- 229 (261)
T cd05068 157 IYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQ-V---DQGYRMPCPPGC--- 229 (261)
T ss_pred cccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH-H---HcCCCCCCCCcC---
Confidence 21111 1123457999999998899999999999999999999 9999875432111110 0 000001111111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHh
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIA 441 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~ 441 (468)
...+.+++.+|++.+|++||+++++...|+.
T Consensus 230 ----~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 230 ----PKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred ----CHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 1237789999999999999999999998864
No 81
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=4.7e-41 Score=330.66 Aligned_cols=254 Identities=24% Similarity=0.343 Sum_probs=198.7
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|++.+.||+|+||.||+|+. .+++.||||++.............+.+|++++..++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 3688899999999999999975 468999999997654333344567889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.++|+|||+++.+...
T Consensus 81 E~~~~g~L~~~l~~~~---~l~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 154 (364)
T cd05599 81 EYLPGGDMMTLLMKKD---TFTEEETRFYIAETILAIDSIH---KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKS 154 (364)
T ss_pred CCCCCcHHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEeecccceecccc
Confidence 9999999999997643 3899999999999999999999 789999999999999999999999999998754321
Q ss_pred CC--------------------------------------CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh
Q 012219 329 SS--------------------------------------NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM 370 (468)
Q Consensus 329 ~~--------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t 370 (468)
.. ......||+.|+|||++....++.++|||||||++|||++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~ 234 (364)
T cd05599 155 HRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLV 234 (364)
T ss_pred ccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhc
Confidence 10 0012358999999999999999999999999999999999
Q ss_pred CCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCC---HHHHHHH
Q 012219 371 GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPT---MQLVSNE 438 (468)
Q Consensus 371 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs---~~~v~~~ 438 (468)
|+.||........... .... ...+..+......+ .+.+++.+|+. +|.+|++ +.+++.+
T Consensus 235 G~~Pf~~~~~~~~~~~----i~~~-~~~~~~~~~~~~s~---~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 235 GYPPFCSDNPQETYRK----IINW-KETLQFPDEVPLSP---EAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred CCCCCCCCCHHHHHHH----HHcC-CCccCCCCCCCCCH---HHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 9999975432211100 0000 00011000001111 25567888886 9999998 8888764
No 82
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.6e-40 Score=328.55 Aligned_cols=260 Identities=23% Similarity=0.360 Sum_probs=202.8
Q ss_pred hhCccccceeeeeCCceEEEEEcC------CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CCceeeEEEEEeeC
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHRSETEELASLESFGNEARLLSQIR-HRNIVKLYGFCLHR 241 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~ 241 (468)
.++|.+.+.||+|+||.||+|... .+..||||++...... ...+.|.+|+++++++. ||||++++++|...
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~--~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~ 113 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARS--SEKQALMSELKIMTHLGPHLNIVNLLGACTKS 113 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCCh--HHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC
Confidence 568889999999999999999742 2346999999754432 23467899999999996 99999999999999
Q ss_pred CEEEEEEEeccCCChhhhhhcCcc--------------------------------------------------------
Q 012219 242 KCMFLIYEYMEMGSLFCVLRTDEE-------------------------------------------------------- 265 (468)
Q Consensus 242 ~~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------------------------- 265 (468)
...++||||+++|+|.++++....
T Consensus 114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (400)
T cd05105 114 GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE 193 (400)
T ss_pred CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence 999999999999999998864311
Q ss_pred -------------------------------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee
Q 012219 266 -------------------------------------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLL 308 (468)
Q Consensus 266 -------------------------------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll 308 (468)
...+++..++.++.|++.||+||| +.+|+||||||+||++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dikp~Nill 270 (400)
T cd05105 194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA---SKNCVHRDLAARNVLL 270 (400)
T ss_pred hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHhEEE
Confidence 124778888999999999999999 7899999999999999
Q ss_pred CCCCCeEEeeccccccccCCCC--CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhh
Q 012219 309 NSELEAFVADFGVARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSL 385 (468)
Q Consensus 309 ~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~ 385 (468)
+.++.+||+|||+++....... ......++..|+|||.+.+..++.++|||||||++|||++ |..||..........
T Consensus 271 ~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~ 350 (400)
T cd05105 271 AQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFY 350 (400)
T ss_pred eCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHH
Confidence 9999999999999986543221 1122346778999999998899999999999999999997 999987543211111
Q ss_pred hcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 386 DKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
.. ............. ...+.+++.+||+.||++||++.+|.+.|.+.-
T Consensus 351 ~~---~~~~~~~~~~~~~-------~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 351 NK---IKSGYRMAKPDHA-------TQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred HH---HhcCCCCCCCccC-------CHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 10 0000111111111 123678999999999999999999999998653
No 83
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=4.3e-41 Score=325.07 Aligned_cols=245 Identities=22% Similarity=0.326 Sum_probs=195.1
Q ss_pred ceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEEEEEEEeccC
Q 012219 176 YCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCMFLIYEYMEM 253 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 253 (468)
+.||+|+||.||+|+.. +++.||+|++...........+.+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 35999999999999754 5789999999765433333456677889988866 799999999999999999999999999
Q ss_pred CChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCce
Q 012219 254 GSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRT 333 (468)
Q Consensus 254 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 333 (468)
|+|...+.... .+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~ 154 (321)
T cd05591 81 GDLMFQIQRSR---KFDEPRSRFYAAEVTLALMFLH---RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTT 154 (321)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeecccceecccCCcccc
Confidence 99998887543 3889999999999999999999 78999999999999999999999999999876433333344
Q ss_pred eccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHH
Q 012219 334 LLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIIL 413 (468)
Q Consensus 334 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (468)
...|++.|+|||++.+..++.++|||||||++|||+||+.||......... ... ...+ ...+.... . .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~-~~i-~~~~---~~~p~~~~----~---~ 222 (321)
T cd05591 155 TFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLF-ESI-LHDD---VLYPVWLS----K---E 222 (321)
T ss_pred ccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHH-HHH-HcCC---CCCCCCCC----H---H
Confidence 457899999999999989999999999999999999999999754322111 000 0000 11111111 1 2
Q ss_pred HHHHHHhcccCCCCCCC-------CHHHHHHH
Q 012219 414 VSTVAFSCLRSQPKSRP-------TMQLVSNE 438 (468)
Q Consensus 414 l~~l~~~cl~~dP~~RP-------s~~~v~~~ 438 (468)
+.+++.+||+.||++|| ++++++++
T Consensus 223 ~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 223 AVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred HHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 66789999999999999 78888744
No 84
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.3e-41 Score=302.42 Aligned_cols=266 Identities=24% Similarity=0.255 Sum_probs=203.8
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee--CCEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH--RKCMF 245 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~ 245 (468)
.++|+..+.|++|+||.||+|+. +++..||+|+++-+...+.-.+ ...+|+.++.+++|||||.+..+..- -+..|
T Consensus 75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPI-tsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy 153 (419)
T KOG0663|consen 75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPI-TSLREINILLKARHPNIVEVKEVVVGSNMDKIY 153 (419)
T ss_pred HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcc-hhHHHHHHHHhcCCCCeeeeEEEEeccccceee
Confidence 35678889999999999999975 5789999999987664433333 34599999999999999999887764 35699
Q ss_pred EEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccc
Q 012219 246 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLL 325 (468)
Q Consensus 246 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 325 (468)
+|||||+. +|...++...+ ++...++.-++.|+++|++||| ...|+|||||++|+|++..|.+||+|||+|+.+
T Consensus 154 ~VMe~~Eh-DLksl~d~m~q--~F~~~evK~L~~QlL~glk~lH---~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~y 227 (419)
T KOG0663|consen 154 IVMEYVEH-DLKSLMETMKQ--PFLPGEVKTLMLQLLRGLKHLH---DNWILHRDLKTSNLLLSHKGILKIADFGLAREY 227 (419)
T ss_pred eeHHHHHh-hHHHHHHhccC--CCchHHHHHHHHHHHHHHHHHh---hceeEecccchhheeeccCCcEEecccchhhhh
Confidence 99999986 89999987653 4888999999999999999999 789999999999999999999999999999999
Q ss_pred cCCCCCceeccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCCcccccch----------------hhhcc
Q 012219 326 NFDSSNRTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSW----------------SLDKN 388 (468)
Q Consensus 326 ~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~----------------~~~~~ 388 (468)
+......+..+-|.+|+|||++.+. .|+++.|+||+|||+.||+++++-|........ .-...
T Consensus 228 gsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~ 307 (419)
T KOG0663|consen 228 GSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSE 307 (419)
T ss_pred cCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccc
Confidence 8887778888899999999988764 799999999999999999999998765432111 00000
Q ss_pred ccc---cccc---CCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHH-HHHHhcC
Q 012219 389 IKL---IDLL---DPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVS-NEFIARN 443 (468)
Q Consensus 389 ~~~---~~~~---~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~-~~l~~~~ 443 (468)
... ..+. -..+...+.... -...=++++...+..||.+|.|++|.+ +.++...
T Consensus 308 lp~~k~~~f~~~pyn~lr~kF~~~~--lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~ 367 (419)
T KOG0663|consen 308 LPAVKKMTFSEHPYNNLRKKFGALS--LSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRET 367 (419)
T ss_pred cchhhccccCCCCchhhhhhccccc--cchhHHHHHHHHhccCccccccHHHhhcccccccC
Confidence 000 0000 000000000000 001245688889999999999998777 5555543
No 85
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=6e-41 Score=318.96 Aligned_cols=262 Identities=26% Similarity=0.321 Sum_probs=198.5
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|++.+.||+|+||.||+|+.. +++.||+|++....... ...+.+.+|+++++.++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENE-EVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVF 79 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccc-cchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEE
Confidence 36888999999999999999764 68899999997653322 23466789999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||++++.+..+.... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 80 e~~~~~~l~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 153 (287)
T cd07848 80 EYVEKNMLELLEEMP---NGVPPEKVRSYIYQLIKAIHWCH---KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEG 153 (287)
T ss_pred ecCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccCccccccc
Confidence 999987776554332 24888999999999999999999 789999999999999999999999999999876432
Q ss_pred CC-CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhh--c---------------ccc
Q 012219 329 SS-NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLD--K---------------NIK 390 (468)
Q Consensus 329 ~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~--~---------------~~~ 390 (468)
.. ......|++.|+|||++.+..++.++|||||||++|||++|+.||........... . ...
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07848 154 SNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPR 233 (287)
T ss_pred ccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccch
Confidence 21 22335689999999999988899999999999999999999999975432111000 0 000
Q ss_pred cccccCCCCCCccc---hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 391 LIDLLDPRLSPPVD---QKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 391 ~~~~~~~~~~~~~~---~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
......+....... .........+.+++.+||+.||++|||+++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 234 FHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred hcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000000000000 0000011237889999999999999999998853
No 86
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.2e-40 Score=315.73 Aligned_cols=255 Identities=25% Similarity=0.398 Sum_probs=202.3
Q ss_pred hCccccceeeeeCCceEEEEEcC------CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKC 243 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 243 (468)
++|.+.+.||+|+||.||+|... +++.||+|.+...... ...+.|.+|+++++.++|+||+++++++.....
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 82 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASN--DARKDFEREAELLTNFQHENIVKFYGVCTEGDP 82 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCH--HHHHHHHHHHHHHHhcCCCCchheeeEEecCCC
Confidence 56888899999999999999753 3478999999765443 234688999999999999999999999999999
Q ss_pred EEEEEEeccCCChhhhhhcCc-----------ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC
Q 012219 244 MFLIYEYMEMGSLFCVLRTDE-----------EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSEL 312 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~-----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~ 312 (468)
.++||||+++++|.+++.... ....+++..+..++.|++.|+.||| +.+++||||||+||+++.++
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~ 159 (280)
T cd05049 83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA---SQHFVHRDLATRNCLVGYDL 159 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeeccccccceEEEcCCC
Confidence 999999999999999997542 1234788999999999999999999 78999999999999999999
Q ss_pred CeEEeeccccccccCCCC--CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhccc
Q 012219 313 EAFVADFGVARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNI 389 (468)
Q Consensus 313 ~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~ 389 (468)
.++|+|||+++....... ......+++.|+|||++.+..++.++|||||||++|||++ |+.||.............
T Consensus 160 ~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~- 238 (280)
T cd05049 160 VVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECIT- 238 (280)
T ss_pred eEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-
Confidence 999999999976532221 1122345678999999999999999999999999999999 999986543321111100
Q ss_pred ccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 012219 390 KLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFI 440 (468)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~ 440 (468)
....+...... ...+.+++.+||+.||++||+++||++.|.
T Consensus 239 ---~~~~~~~~~~~-------~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 239 ---QGRLLQRPRTC-------PSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred ---cCCcCCCCCCC-------CHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 00000111111 123678999999999999999999999885
No 87
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.3e-40 Score=321.33 Aligned_cols=199 Identities=27% Similarity=0.361 Sum_probs=173.2
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|++.+.||+|+||.||++... ++..+|+|.+...... ...+.+.+|++++++++|+||+++++++...+..++||
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 82 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKP--AIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM 82 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCH--HHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEE
Confidence 67899999999999999999764 6888999988765322 23457889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++|+|.+++.... .+++.....++.|++.||.|||+ ..+++|+||||+||+++.++.+||+|||++......
T Consensus 83 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH~--~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 83 EHMDGGSLDQVLKKAG---RIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred ecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHh--cCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence 9999999999997543 37888999999999999999994 247999999999999999999999999998765321
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCc
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGEL 377 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~ 377 (468)
......|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 158 --~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 158 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred --ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 22334688999999999988899999999999999999999999864
No 88
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=9e-41 Score=318.25 Aligned_cols=261 Identities=25% Similarity=0.352 Sum_probs=192.5
Q ss_pred hCccccceeeeeCCceEEEEEc--CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc---cCCceeeEEEEEee----
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL--PSGKVVALKKLHRSETEELASLESFGNEARLLSQI---RHRNIVKLYGFCLH---- 240 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~---- 240 (468)
++|.+.+.||+|+||.||+|.. .+++.||+|++....... .....+.+|+.+++.+ +||||++++++|..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~ 79 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 79 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCC-CchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCC
Confidence 3688899999999999999975 346889999987544322 1223455677776665 69999999999852
Q ss_pred -CCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeec
Q 012219 241 -RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADF 319 (468)
Q Consensus 241 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 319 (468)
....++|+||+. ++|.+++..... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 80 ~~~~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~i~~qi~~aL~~lH---~~~iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 80 RETKLTLVFEHVD-QDLTTYLDKVPE-PGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred CCCcEEEEEccCC-CCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEcCCCCEEEccc
Confidence 345899999996 689988875432 34889999999999999999999 789999999999999999999999999
Q ss_pred cccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhc--------cccc
Q 012219 320 GVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDK--------NIKL 391 (468)
Q Consensus 320 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~--------~~~~ 391 (468)
|+++..... .......|++.|+|||++.+..++.++|||||||++|||++|++||............ ....
T Consensus 155 g~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~ 233 (290)
T cd07862 155 GLARIYSFQ-MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 233 (290)
T ss_pred cceEeccCC-cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhc
Confidence 999876433 2333456899999999998889999999999999999999999999754321110000 0000
Q ss_pred -------ccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 392 -------IDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 392 -------~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
.....+................+.+++.+|++.||++|||+.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 234 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 0000000000000000011123668999999999999999999985
No 89
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.3e-40 Score=311.33 Aligned_cols=250 Identities=25% Similarity=0.429 Sum_probs=200.3
Q ss_pred hCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
++|.+.+.||+|+||.||+|+..++..+|+|.+...... .+.|.+|+.++.+++||||+++++++......+++||
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS----EDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTE 79 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCccc----HHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEE
Confidence 467888999999999999998877778999998754332 3568899999999999999999999998888999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|+++|+|.+++..... .+++..++.++.||+.||+||| +.+++|+||||+||+++.++.+||+|||.++......
T Consensus 80 ~~~~~~l~~~i~~~~~--~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05113 80 YMSNGCLLNYLREHGK--RFQPSQLLEMCKDVCEGMAYLE---SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE 154 (256)
T ss_pred cCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCCEEECCCccceecCCCc
Confidence 9999999999876433 4899999999999999999999 7899999999999999999999999999987654322
Q ss_pred CCc-eeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 330 SNR-TLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 330 ~~~-~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
... ....++..|+|||+..+..++.++|||||||++|||+| |+.||........... .............
T Consensus 155 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~---- 226 (256)
T cd05113 155 YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEK----VSQGLRLYRPHLA---- 226 (256)
T ss_pred eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHH----HhcCCCCCCCCCC----
Confidence 111 11235568999999988889999999999999999999 9999875443211110 0110011111111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
...+.+++.+||+.+|++||++.++++.+
T Consensus 227 ---~~~~~~li~~cl~~~p~~Rp~~~~ll~~~ 255 (256)
T cd05113 227 ---SEKVYAIMYSCWHEKAEERPTFQQLLSSI 255 (256)
T ss_pred ---CHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence 12377899999999999999999999876
No 90
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.2e-40 Score=315.31 Aligned_cols=257 Identities=22% Similarity=0.306 Sum_probs=200.2
Q ss_pred HhhCccccceeeeeCCceEEEEEcC------CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR 241 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 241 (468)
..++|++.+.||+|+||.||+|... .+..||+|++...... .....|.+|+.+++.++|+||+++++++...
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~--~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~ 81 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASM--RERIEFLNEASVMKEFNCHHVVRLLGVVSQG 81 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 4578999999999999999998643 3567999998654322 2345688999999999999999999999999
Q ss_pred CEEEEEEEeccCCChhhhhhcCcc-------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCe
Q 012219 242 KCMFLIYEYMEMGSLFCVLRTDEE-------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEA 314 (468)
Q Consensus 242 ~~~~lv~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~ 314 (468)
...++||||+++|+|.+++..... ...+++..++.++.|++.||.||| +.+++||||||+||++++++.+
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~~vH~dlkp~Nil~~~~~~~ 158 (277)
T cd05062 82 QPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAEDFTV 158 (277)
T ss_pred CCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCcchheEEEcCCCCE
Confidence 999999999999999999865322 223678889999999999999999 7899999999999999999999
Q ss_pred EEeeccccccccCCCCCc--eeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhccccc
Q 012219 315 FVADFGVARLLNFDSSNR--TLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKL 391 (468)
Q Consensus 315 kl~Dfg~~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~ 391 (468)
+|+|||+++......... ....++..|+|||++.+..++.++|||||||++|||++ |..||............ ..
T Consensus 159 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~--~~ 236 (277)
T cd05062 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFV--ME 236 (277)
T ss_pred EECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH--Hc
Confidence 999999987653221111 12235678999999998889999999999999999999 78898654322111000 00
Q ss_pred ccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 012219 392 IDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFI 440 (468)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~ 440 (468)
... +..... ....+.+++.+|++.+|++|||+.++++.|+
T Consensus 237 ~~~--~~~~~~-------~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 237 GGL--LDKPDN-------CPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred CCc--CCCCCC-------CCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 000 011111 1123778999999999999999999998875
No 91
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.1e-40 Score=321.42 Aligned_cols=244 Identities=24% Similarity=0.361 Sum_probs=191.6
Q ss_pred ceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhh-ccCCceeeEEEEEeeCCEEEEEEEeccC
Q 012219 176 YCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQ-IRHRNIVKLYGFCLHRKCMFLIYEYMEM 253 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lv~e~~~~ 253 (468)
+.||+|+||.||+|.. .+++.||+|+++..........+.+..|..++.. .+||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 3699999999999975 4578999999986543332334556667777765 4899999999999999999999999999
Q ss_pred CChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCce
Q 012219 254 GSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRT 333 (468)
Q Consensus 254 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 333 (468)
|+|..++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 g~L~~~~~~~~---~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~ 154 (316)
T cd05592 81 GDLMFHIQSSG---RFDEARARFYAAEIICGLQFLH---KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKAS 154 (316)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccc
Confidence 99999887543 3888999999999999999999 78999999999999999999999999999976543333344
Q ss_pred eccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHH
Q 012219 334 LLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIIL 413 (468)
Q Consensus 334 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (468)
...||+.|+|||++.+..++.++|||||||++|||++|+.||......... .. +. ...+.+..... . .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~-~~---i~-~~~~~~~~~~~----~---~ 222 (316)
T cd05592 155 TFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELF-DS---IL-NDRPHFPRWIS----K---E 222 (316)
T ss_pred cccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHH-HH---HH-cCCCCCCCCCC----H---H
Confidence 567999999999999889999999999999999999999999754321111 00 00 01111111111 1 2
Q ss_pred HHHHHHhcccCCCCCCCCHH-HHHH
Q 012219 414 VSTVAFSCLRSQPKSRPTMQ-LVSN 437 (468)
Q Consensus 414 l~~l~~~cl~~dP~~RPs~~-~v~~ 437 (468)
+.+++.+||+.||++||++. ++.+
T Consensus 223 ~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 223 AKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred HHHHHHHHccCCHHHcCCChHHHHc
Confidence 56788999999999999974 6654
No 92
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=3.5e-40 Score=310.19 Aligned_cols=256 Identities=28% Similarity=0.392 Sum_probs=203.2
Q ss_pred hhCccccceeeeeCCceEEEEEcC----CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLP----SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCM 244 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 244 (468)
.++|++.+.||+|+||.||+|.+. +...||+|.+...... .....|.+|+.++.+++|+||+++++++...+..
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSD--KQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPV 80 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCCh--HHHHHHHHHHHHHHhCCCCCcceEeEEEecCCce
Confidence 357889999999999999999764 2457999998755432 2346788999999999999999999999999999
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
+++|||+++++|.+++..... .+++..++.++.|++.|++||| +.+|+||||||+||++++++.++|+|||+++.
T Consensus 81 ~iv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~ 155 (266)
T cd05033 81 MIITEYMENGSLDKFLRENDG--KFTVGQLVGMLRGIASGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRR 155 (266)
T ss_pred EEEEEcCCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCCEEECccchhhc
Confidence 999999999999999976433 4899999999999999999999 78999999999999999999999999999987
Q ss_pred ccCCCCCce--eccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 325 LNFDSSNRT--LLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 325 ~~~~~~~~~--~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
......... ...++..|+|||...+..++.++||||||+++|||++ |..||.......... ...+........
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~ 231 (266)
T cd05033 156 LEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIK----AVEDGYRLPPPM 231 (266)
T ss_pred ccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHH----HHHcCCCCCCCC
Confidence 642221111 1234578999999998899999999999999999998 999986543221110 000000000111
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
.. ...+.+++.+|++.+|++||++.++++.|.+.
T Consensus 232 ~~-------~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 232 DC-------PSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CC-------CHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 11 12367899999999999999999999999764
No 93
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=8e-41 Score=322.65 Aligned_cols=245 Identities=24% Similarity=0.325 Sum_probs=195.7
Q ss_pred ceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEEEEEEEeccC
Q 012219 176 YCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCMFLIYEYMEM 253 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 253 (468)
+.||+|+||.||+|+.. +++.||+|++.............+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999764 5789999999865433333456677899999888 699999999999999999999999999
Q ss_pred CChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCce
Q 012219 254 GSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRT 333 (468)
Q Consensus 254 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 333 (468)
|+|..++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (318)
T cd05570 81 GDLMFHIQRSG---RFDEPRARFYAAEIVLGLQFLH---ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTS 154 (318)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCccc
Confidence 99999887543 3899999999999999999999 78999999999999999999999999999875433333333
Q ss_pred eccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHH
Q 012219 334 LLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIIL 413 (468)
Q Consensus 334 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (468)
...|++.|+|||++.+..++.++|||||||++|||++|+.||........... ... .......... ..
T Consensus 155 ~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~--i~~---~~~~~~~~~~-------~~ 222 (318)
T cd05570 155 TFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQS--ILE---DEVRYPRWLS-------KE 222 (318)
T ss_pred ceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHH--HHc---CCCCCCCcCC-------HH
Confidence 45689999999999999999999999999999999999999975432211100 000 0111111111 12
Q ss_pred HHHHHHhcccCCCCCCCCH-----HHHHHH
Q 012219 414 VSTVAFSCLRSQPKSRPTM-----QLVSNE 438 (468)
Q Consensus 414 l~~l~~~cl~~dP~~RPs~-----~~v~~~ 438 (468)
+.+++.+||+.||++||++ .+++++
T Consensus 223 ~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 223 AKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred HHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 6679999999999999999 888754
No 94
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.3e-40 Score=322.45 Aligned_cols=250 Identities=22% Similarity=0.342 Sum_probs=195.3
Q ss_pred ceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEEEEEEEeccC
Q 012219 176 YCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCMFLIYEYMEM 253 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 253 (468)
+.||+|+||.||+|.. .+++.||+|++...........+.+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 3699999999999975 46789999999876544444566788999999888 699999999999999999999999999
Q ss_pred CChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCce
Q 012219 254 GSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRT 333 (468)
Q Consensus 254 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 333 (468)
|+|..++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~~~~~~---~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (327)
T cd05617 81 GDLMFHMQRQR---KLPEEHARFYAAEICIALNFLH---ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTS 154 (327)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCcee
Confidence 99998886543 3899999999999999999999 78999999999999999999999999999875433333344
Q ss_pred eccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccC--CCCCCccchhHHHHH
Q 012219 334 LLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLD--PRLSPPVDQKIRQDI 411 (468)
Q Consensus 334 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 411 (468)
...||+.|+|||++.+..++.++|||||||++|||++|+.||+.................... ..++...+
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~------- 227 (327)
T cd05617 155 TFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLS------- 227 (327)
T ss_pred cccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCC-------
Confidence 567999999999999999999999999999999999999999643221100000000000001 11111111
Q ss_pred HHHHHHHHhcccCCCCCCCCH------HHHHHH
Q 012219 412 ILVSTVAFSCLRSQPKSRPTM------QLVSNE 438 (468)
Q Consensus 412 ~~l~~l~~~cl~~dP~~RPs~------~~v~~~ 438 (468)
..+.+++.+||+.||++||++ +++.++
T Consensus 228 ~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 228 VKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred HHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence 125678999999999999984 566543
No 95
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-42 Score=327.43 Aligned_cols=260 Identities=27% Similarity=0.417 Sum_probs=215.5
Q ss_pred HHHHHHhhCccccceeeeeCCceEEEEEcCC-CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC
Q 012219 163 QDMIEATEDFHIKYCIGTGGYGSVYRARLPS-GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR 241 (468)
Q Consensus 163 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 241 (468)
++|+....+....++||-|.||.||.|.|+. .-.||||.++.+.. .+++|..|..+|+.++|||+|+++|+|..+
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM----eveEFLkEAAvMKeikHpNLVqLLGVCT~E 335 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTHE 335 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcch----hHHHHHHHHHHHHhhcCccHHHHhhhhccC
Confidence 4555555677888999999999999998754 56799999987654 468999999999999999999999999999
Q ss_pred CEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccc
Q 012219 242 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGV 321 (468)
Q Consensus 242 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 321 (468)
..+|||+|||.+|+|.++|+..... .++....+.++.||+.|++||. .+.+|||||.++|+|+.++..|||+|||+
T Consensus 336 pPFYIiTEfM~yGNLLdYLRecnr~-ev~avvLlyMAtQIsSaMeYLE---kknFIHRDLAARNCLVgEnhiVKvADFGL 411 (1157)
T KOG4278|consen 336 PPFYIITEFMCYGNLLDYLRECNRS-EVPAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHIVKVADFGL 411 (1157)
T ss_pred CCeEEEEecccCccHHHHHHHhchh-hcchhHHHHHHHHHHHHHHHHH---HhhhhhhhhhhhhccccccceEEeeccch
Confidence 9999999999999999999876543 3666778899999999999999 88999999999999999999999999999
Q ss_pred cccccCCCCCceeccc---cccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCC
Q 012219 322 ARLLNFDSSNRTLLAG---TYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDP 397 (468)
Q Consensus 322 ~~~~~~~~~~~~~~~g---~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 397 (468)
++++..+.+. ...| ...|.|||-+....++.|+|||+|||+|||+.| |..||..+... +..+++..
T Consensus 412 sRlMtgDTYT--AHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlS--------qVY~LLEk 481 (1157)
T KOG4278|consen 412 SRLMTGDTYT--AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--------QVYGLLEK 481 (1157)
T ss_pred hhhhcCCcee--cccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHH--------HHHHHHhc
Confidence 9998654433 2333 458999999999999999999999999999999 99998865432 22233334
Q ss_pred CCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 398 RLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 398 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
.++...++.. ...+++|++.||+.+|.+||++.|+-..|+.+-
T Consensus 482 gyRM~~PeGC---PpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf 524 (1157)
T KOG4278|consen 482 GYRMDGPEGC---PPKVYELMRACWNWSPSDRPSFAEIHQAFETMF 524 (1157)
T ss_pred cccccCCCCC---CHHHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence 4433333322 234788999999999999999999988887653
No 96
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1e-40 Score=321.56 Aligned_cols=243 Identities=23% Similarity=0.362 Sum_probs=192.0
Q ss_pred ceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEEEEEEEeccC
Q 012219 176 YCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCMFLIYEYMEM 253 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 253 (468)
+.||+|+||.||+|+.. +|+.||+|.++..........+.+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 36999999999999764 6889999999765432222345566788887754 899999999999999999999999999
Q ss_pred CChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCce
Q 012219 254 GSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRT 333 (468)
Q Consensus 254 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 333 (468)
|+|..++.... .+++.++..++.|++.||+||| +.+|+||||||+||+++.++.++|+|||+++..........
T Consensus 81 g~L~~~i~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (316)
T cd05620 81 GDLMFHIQDKG---RFDLYRATFYAAEIVCGLQFLH---SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRAS 154 (316)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCcee
Confidence 99999887543 3788999999999999999999 78999999999999999999999999999875433333344
Q ss_pred eccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHH
Q 012219 334 LLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIIL 413 (468)
Q Consensus 334 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (468)
...|++.|+|||++.+..++.++|||||||++|||++|+.||......... .. .....+....... . .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~-~~----~~~~~~~~~~~~~----~---~ 222 (316)
T cd05620 155 TFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELF-ES----IRVDTPHYPRWIT----K---E 222 (316)
T ss_pred ccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHH-HH----HHhCCCCCCCCCC----H---H
Confidence 567899999999999999999999999999999999999999754321110 00 0011111221111 1 2
Q ss_pred HHHHHHhcccCCCCCCCCH-HHHH
Q 012219 414 VSTVAFSCLRSQPKSRPTM-QLVS 436 (468)
Q Consensus 414 l~~l~~~cl~~dP~~RPs~-~~v~ 436 (468)
+.+++.+||+.||++||++ +++.
T Consensus 223 ~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 223 SKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred HHHHHHHHccCCHHHcCCChHHHH
Confidence 5678999999999999998 5666
No 97
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.3e-40 Score=327.44 Aligned_cols=256 Identities=23% Similarity=0.304 Sum_probs=199.6
Q ss_pred HhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEE
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (468)
..++|++.+.||+|+||.||+++. .+++.||+|++...........+.+.+|+.+++.++||||+++++++.+.+..++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 356799999999999999999975 4688999999975443333344567899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccccc
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLN 326 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 326 (468)
||||+++|+|.+++... .++...+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 121 v~Ey~~gg~L~~~l~~~----~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~ 193 (370)
T cd05596 121 VMEYMPGGDLVNLMSNY----DIPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMD 193 (370)
T ss_pred EEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEcCCCCEEEEeccceeecc
Confidence 99999999999998643 3778888899999999999999 7899999999999999999999999999998764
Q ss_pred CCCC-CceeccccccccccccccCC----CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 327 FDSS-NRTLLAGTYGYIAPELAYTM----VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 327 ~~~~-~~~~~~g~~~y~aPE~~~~~----~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
.... ......||+.|+|||++.+. .++.++|||||||++|||++|+.||......... ........ ......
T Consensus 194 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~-~~i~~~~~--~~~~~~ 270 (370)
T cd05596 194 ANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTY-SKIMDHKN--SLTFPD 270 (370)
T ss_pred CCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHH-HHHHcCCC--cCCCCC
Confidence 3222 22345699999999988653 4788999999999999999999999754321110 10000000 001111
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCC--CCCHHHHHHH
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKS--RPTMQLVSNE 438 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~~v~~~ 438 (468)
. .... ..+.+++.+|++.+|++ ||++++++++
T Consensus 271 ~--~~~s---~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 271 D--IEIS---KQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred c--CCCC---HHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 0 0011 12667899999999988 9999999865
No 98
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=2.4e-40 Score=310.79 Aligned_cols=254 Identities=26% Similarity=0.382 Sum_probs=201.8
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
.+|.+.+.||+|+||.||+|.. +.++.||+|.+..... ..+.+.+|++++.+++|+||+++++++......+++|
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 81 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCch----HHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEE
Confidence 4578889999999999999975 4588999999875432 2467889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++++|.+++..... ..+++..++.++.|++.||+||| +.+++||||||+||++++++.+||+|||++......
T Consensus 82 e~~~~~~L~~~~~~~~~-~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~ 157 (263)
T cd05052 82 EFMTYGNLLDYLRECNR-QEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 157 (263)
T ss_pred EeCCCCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCcEEeCCCccccccccc
Confidence 99999999999875432 34889999999999999999999 789999999999999999999999999999775432
Q ss_pred CCCc-eeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchh
Q 012219 329 SSNR-TLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQK 406 (468)
Q Consensus 329 ~~~~-~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (468)
.... ....++..|+|||.+.+..++.++|||||||++|||++ |..||.......... .......+......+
T Consensus 158 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~~-- 231 (263)
T cd05052 158 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE----LLEKGYRMERPEGCP-- 231 (263)
T ss_pred eeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH----HHHCCCCCCCCCCCC--
Confidence 2111 11223567999999998899999999999999999998 999986533211100 011111111111111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
..+.+++.+||+.+|++||++.++.+.|...
T Consensus 232 -----~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 232 -----PKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred -----HHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 2267799999999999999999999998753
No 99
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=2.5e-40 Score=312.94 Aligned_cols=250 Identities=22% Similarity=0.271 Sum_probs=192.5
Q ss_pred eeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEeccCCCh
Q 012219 178 IGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYMEMGSL 256 (468)
Q Consensus 178 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 256 (468)
||+|+||.||+++. .+|+.+|+|.+...........+.+..|++++++++||||+++.+++......++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 69999999999975 46899999999754333222334566799999999999999999999999999999999999999
Q ss_pred hhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCceecc
Q 012219 257 FCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRTLLA 336 (468)
Q Consensus 257 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 336 (468)
.+++.... ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.++|+|||++...... .......
T Consensus 81 ~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~-~~~~~~~ 155 (277)
T cd05607 81 KYHIYNVG-ERGLEMERVIHYSAQITCGILHLH---SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG-KTITQRA 155 (277)
T ss_pred HHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHH---HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCC-ceeeccC
Confidence 98886543 234889999999999999999999 789999999999999999999999999998765422 2223356
Q ss_pred ccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHHHH
Q 012219 337 GTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVST 416 (468)
Q Consensus 337 g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 416 (468)
|+..|+|||++.+..++.++||||+||++|||++|+.||............ .............. .. ...+.+
T Consensus 156 ~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~---~~~~~~ 228 (277)
T cd05607 156 GTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEEL---KRRTLEDEVKFEHQ-NF---TEESKD 228 (277)
T ss_pred CCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHH---HHHhhccccccccc-cC---CHHHHH
Confidence 899999999999888999999999999999999999998643221110000 00011111110000 11 112678
Q ss_pred HHHhcccCCCCCCCCHHHHHHHH
Q 012219 417 VAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 417 l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
++.+||+.||++||++.|+++..
T Consensus 229 li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 229 ICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred HHHHHhccCHhhCCCCccchhhh
Confidence 99999999999999996655433
No 100
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=2e-40 Score=319.40 Aligned_cols=244 Identities=23% Similarity=0.386 Sum_probs=192.2
Q ss_pred ceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhh-ccCCceeeEEEEEeeCCEEEEEEEeccC
Q 012219 176 YCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQ-IRHRNIVKLYGFCLHRKCMFLIYEYMEM 253 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lv~e~~~~ 253 (468)
+.||+|+||.||+|... +++.||+|+++..........+.+..|..++.. ++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999764 578999999976543222234556678888876 4899999999999999999999999999
Q ss_pred CChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCce
Q 012219 254 GSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRT 333 (468)
Q Consensus 254 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 333 (468)
|+|.+++.... .+++.++..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 g~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (316)
T cd05619 81 GDLMFHIQSCH---KFDLPRATFYAAEIICGLQFLH---SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTC 154 (316)
T ss_pred CcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCcee
Confidence 99999987543 3788999999999999999999 78999999999999999999999999999875433333334
Q ss_pred eccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHH
Q 012219 334 LLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIIL 413 (468)
Q Consensus 334 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (468)
...||+.|+|||++.+..++.++|||||||++|||++|+.||........ .. . .....+....... . .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~-~~-~---i~~~~~~~~~~~~----~---~ 222 (316)
T cd05619 155 TFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEEL-FQ-S---IRMDNPCYPRWLT----R---E 222 (316)
T ss_pred eecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHH-HH-H---HHhCCCCCCccCC----H---H
Confidence 45789999999999988999999999999999999999999975432111 00 0 0111111221111 1 2
Q ss_pred HHHHHHhcccCCCCCCCCHH-HHHH
Q 012219 414 VSTVAFSCLRSQPKSRPTMQ-LVSN 437 (468)
Q Consensus 414 l~~l~~~cl~~dP~~RPs~~-~v~~ 437 (468)
+.+++.+||+.||++||++. ++..
T Consensus 223 ~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 223 AKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred HHHHHHHHhccCHhhcCCChHHHHc
Confidence 56789999999999999996 6654
No 101
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.4e-40 Score=310.35 Aligned_cols=254 Identities=26% Similarity=0.389 Sum_probs=199.6
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|++...||+|+||.||+|.. .+++.||+|++...... ....+.+|+.++.+++||||+++++++...+..++|+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~---~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~ 85 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGD---DFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICM 85 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccc---hHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEE
Confidence 5789999999999999999975 57889999999754332 2346778999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++++|.++++... .+++..+..++.|++.||.||| +.+|+||||+|+||+++.++.++|+|||++......
T Consensus 86 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06646 86 EYCGGGSLQDIYHVTG---PLSELQIAYVCRETLQGLAYLH---SKGKMHRDIKGANILLTDNGDVKLADFGVAAKITAT 159 (267)
T ss_pred eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCCEEECcCccceeeccc
Confidence 9999999999987543 3789999999999999999999 789999999999999999999999999999866433
Q ss_pred CCCceecccccccccccccc---CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccch
Q 012219 329 SSNRTLLAGTYGYIAPELAY---TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQ 405 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (468)
........++..|+|||.+. ...++.++|||||||++|||++|+.||............ .......+..... .
T Consensus 160 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~--~ 235 (267)
T cd06646 160 IAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM--SKSNFQPPKLKDK--T 235 (267)
T ss_pred ccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheee--ecCCCCCCCCccc--c
Confidence 33333456888999999874 345788999999999999999999998643321111000 0000111111100 0
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 406 KIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 406 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
.....+.+++.+||+.+|++||+++++++++
T Consensus 236 ---~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 236 ---KWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred ---ccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 1112377899999999999999999998764
No 102
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.1e-40 Score=334.97 Aligned_cols=250 Identities=23% Similarity=0.249 Sum_probs=197.7
Q ss_pred CccccceeeeeCCceEEEEEcC-C-CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARLP-S-GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
.|.+.+.||+|+||.||+|... + +..||+|.+...... ....+.+|+++++.++||||+++++++...+..++||
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~---~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~ 144 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDER---QAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIM 144 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHH---HHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEE
Confidence 4888999999999999999643 3 677888877554332 3356778999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcC-cccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 249 EYMEMGSLFCVLRTD-EEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 249 e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
||+++|+|.+++... .....+++.++..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 145 E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~ 221 (478)
T PTZ00267 145 EYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVH---SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSD 221 (478)
T ss_pred ECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCcCHHhEEECCCCcEEEEeCcCceecCC
Confidence 999999999988643 22345889999999999999999999 78999999999999999999999999999987643
Q ss_pred CCC--CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccch
Q 012219 328 DSS--NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQ 405 (468)
Q Consensus 328 ~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (468)
... ......||+.|+|||++.+..++.++|||||||++|||+||+.||............ .....++ ......
T Consensus 222 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~---~~~~~~~-~~~~~s- 296 (478)
T PTZ00267 222 SVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQV---LYGKYDP-FPCPVS- 296 (478)
T ss_pred ccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH---HhCCCCC-CCccCC-
Confidence 221 223456899999999999999999999999999999999999998753321110000 0000010 111111
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 406 KIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 406 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
..+.+++.+||+.||++||++.++++
T Consensus 297 ------~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 297 ------SGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred ------HHHHHHHHHHhccChhhCcCHHHHHh
Confidence 12677999999999999999988864
No 103
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=9e-41 Score=323.08 Aligned_cols=240 Identities=24% Similarity=0.363 Sum_probs=188.8
Q ss_pred ceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHH-HHhhccCCceeeEEEEEeeCCEEEEEEEeccC
Q 012219 176 YCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEAR-LLSQIRHRNIVKLYGFCLHRKCMFLIYEYMEM 253 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 253 (468)
+.||+|+||+||+|.. .+|+.||+|++...........+.+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 3699999999999976 478999999997654332233345555554 56789999999999999999999999999999
Q ss_pred CChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCce
Q 012219 254 GSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRT 333 (468)
Q Consensus 254 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 333 (468)
|+|..++.... .+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++..........
T Consensus 81 g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (323)
T cd05575 81 GELFFHLQRER---SFPEPRARFYAAEIASALGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTS 154 (323)
T ss_pred CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccc
Confidence 99999887543 3888999999999999999999 78999999999999999999999999999876433333334
Q ss_pred eccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHH
Q 012219 334 LLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIIL 413 (468)
Q Consensus 334 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (468)
...|++.|+|||++.+..++.++|||||||++|||++|+.||......... .. ... ....+.+... ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~-~~---i~~-~~~~~~~~~~-------~~ 222 (323)
T cd05575 155 TFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMY-DN---ILN-KPLRLKPNIS-------VS 222 (323)
T ss_pred cccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHH-HH---HHc-CCCCCCCCCC-------HH
Confidence 457899999999999999999999999999999999999999754321110 00 000 0011112111 12
Q ss_pred HHHHHHhcccCCCCCCCCHH
Q 012219 414 VSTVAFSCLRSQPKSRPTMQ 433 (468)
Q Consensus 414 l~~l~~~cl~~dP~~RPs~~ 433 (468)
+.+++.+|++.||++||++.
T Consensus 223 ~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 223 ARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred HHHHHHHHhhcCHHhCCCCC
Confidence 66789999999999999984
No 104
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-40 Score=304.41 Aligned_cols=263 Identities=23% Similarity=0.392 Sum_probs=205.0
Q ss_pred hhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhh--ccCCceeeEEEEEeeC----C
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQ--IRHRNIVKLYGFCLHR----K 242 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~----~ 242 (468)
..+..+.+.||+|.||.||+|+++ |..||||++...+ .+.+.+|.++.+. |+|+||+.+++.-..+ .
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srd------E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~T 282 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRD------ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWT 282 (513)
T ss_pred hheeEEEEEecCccccceeecccc-CCceEEEEecccc------hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceE
Confidence 356788899999999999999994 7889999997543 2567788888876 4999999999876543 2
Q ss_pred EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHh-----cCCCCeEecCCCCCceeeCCCCCeEEe
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHH-----DCTPPIVHRDISSNNVLLNSELEAFVA 317 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~-----~~~~~ivH~dlk~~NIll~~~~~~kl~ 317 (468)
+++||++|.+.|||+|+|... .++....++++..+|.||++||. +.++.|+|||||+.|||+..++++.|+
T Consensus 283 QLwLvTdYHe~GSL~DyL~r~----tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IA 358 (513)
T KOG2052|consen 283 QLWLVTDYHEHGSLYDYLNRN----TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 358 (513)
T ss_pred EEEEeeecccCCcHHHHHhhc----cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEe
Confidence 589999999999999999863 38889999999999999999995 347889999999999999999999999
Q ss_pred eccccccccCCCC----CceeccccccccccccccCCC------CCccchhhHHHHHHHHHHhC----------CCCCCc
Q 012219 318 DFGVARLLNFDSS----NRTLLAGTYGYIAPELAYTMV------VTEKCDVYSFGVVALEVLMG----------KHPGEL 377 (468)
Q Consensus 318 Dfg~~~~~~~~~~----~~~~~~g~~~y~aPE~~~~~~------~~~~~Dv~s~Gvil~el~tg----------~~p~~~ 377 (468)
|+|+|........ .....+||.+|||||++...- --..+||||||.++||+.-+ +.||.+
T Consensus 359 DLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd 438 (513)
T KOG2052|consen 359 DLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYD 438 (513)
T ss_pred eceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCccc
Confidence 9999976543321 233468999999999987542 22468999999999999742 257766
Q ss_pred ccccchhhhc--ccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCC
Q 012219 378 LSSSSWSLDK--NIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNK 444 (468)
Q Consensus 378 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~ 444 (468)
......+.++ ..-..+.+.|.++..... .+.+..+.+++..||..+|..|-|+--+.+.|.++.+
T Consensus 439 ~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s--~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 439 VVPSDPSFEEMRKVVCVQKLRPNIPNRWKS--DPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred CCCCCCCHHHHhcceeecccCCCCCccccc--CHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 5443333332 222333344444433322 2566679999999999999999999988888877654
No 105
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=3.1e-40 Score=308.54 Aligned_cols=252 Identities=28% Similarity=0.400 Sum_probs=203.2
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
+|++.+.||+|++|.||+|.. .+++.|++|.+...... ....+.+.+|++++++++|||++++++++...+..++|+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN-RREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVME 79 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC-HHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEE
Confidence 477788999999999999975 46899999998754332 2345678899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|+++++|.++++... ...+++..++.++.|++.||.||| +.+++|+||||+||+++.++.++|+|||+++......
T Consensus 80 ~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~~l~~al~~lH---~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 80 YAENGDLHKLLKMQR-GRPLPEDQVWRFFIQILLGLAHLH---SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred eCCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence 999999999997642 235889999999999999999999 7899999999999999999999999999998765443
Q ss_pred CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHH
Q 012219 330 SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQ 409 (468)
Q Consensus 330 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (468)
.......|++.|+|||+..+..++.++||||||+++|||++|+.||........... .....-+......
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~------ 225 (256)
T cd08529 156 NFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILK----IIRGVFPPVSQMY------ 225 (256)
T ss_pred chhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HHcCCCCCCcccc------
Confidence 333445688999999999998899999999999999999999999875432111100 0000001111111
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 410 DIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 410 ~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
...+.+++.+||+.+|++||++.++++.
T Consensus 226 -~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 226 -SQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred -CHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 1237789999999999999999998864
No 106
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.8e-40 Score=322.30 Aligned_cols=254 Identities=24% Similarity=0.357 Sum_probs=196.9
Q ss_pred CccccceeeeeCCceEEEEEc----CCCCEEEEEEecCcchh-hhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL----PSGKVVALKKLHRSETE-ELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCM 244 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 244 (468)
+|++.+.||+|+||.||+++. .+++.||+|++...... .....+.+..|++++..+ +|+||+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 477889999999999999964 36889999999754322 222345678899999999 599999999999999999
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
++||||+++|+|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++.
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~ 154 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD---NFSEDEVRFYSGEIILALEHLH---KLGIVYRDIKLENILLDSEGHVVLTDFGLSKE 154 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcEecCCCHHHeEECCCCCEEEeeCcCCcc
Confidence 99999999999999987543 3889999999999999999999 78999999999999999999999999999976
Q ss_pred ccCCC-CCceeccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCc
Q 012219 325 LNFDS-SNRTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPP 402 (468)
Q Consensus 325 ~~~~~-~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (468)
..... .......||+.|+|||++.+. .++.++|||||||++|||+||+.||................ ...++.+...
T Consensus 155 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~ 233 (332)
T cd05614 155 FLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRI-LKCDPPFPSF 233 (332)
T ss_pred ccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHH-hcCCCCCCCC
Confidence 53222 222345789999999998765 47889999999999999999999996432211100000000 0112222222
Q ss_pred cchhHHHHHHHHHHHHHhcccCCCCCCC-----CHHHHHHH
Q 012219 403 VDQKIRQDIILVSTVAFSCLRSQPKSRP-----TMQLVSNE 438 (468)
Q Consensus 403 ~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~~v~~~ 438 (468)
... .+.+++.+||+.||++|| ++++++++
T Consensus 234 ~~~-------~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 234 IGP-------EAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred CCH-------HHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 221 256789999999999999 67787754
No 107
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.7e-40 Score=328.64 Aligned_cols=253 Identities=21% Similarity=0.341 Sum_probs=194.2
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
+|...+.||+|+||.||+|+. .+++.||+|++...........+.+.+|++++++++|+||+++++.+.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 578889999999999999975 5688999999976544333456678899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~gg~L~~~l~~~~---~~~e~~~~~~~~qi~~al~~lH---~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~ 155 (382)
T cd05625 82 YIPGGDMMSLLIRMG---IFPEDLARFYIAELTCAVESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (382)
T ss_pred CCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEeECCCCccccccc
Confidence 999999999987543 3788888899999999999999 7899999999999999999999999999975321000
Q ss_pred -----------------------------------------------CCceeccccccccccccccCCCCCccchhhHHH
Q 012219 330 -----------------------------------------------SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFG 362 (468)
Q Consensus 330 -----------------------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G 362 (468)
.......||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG 235 (382)
T cd05625 156 DSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 235 (382)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEech
Confidence 001124689999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCC---HHHHHHH
Q 012219 363 VVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPT---MQLVSNE 438 (468)
Q Consensus 363 vil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs---~~~v~~~ 438 (468)
|++|||++|+.||........... .... ......+.......+ ..+++.+|+ .+|++|++ +++++++
T Consensus 236 vil~elltG~~Pf~~~~~~~~~~~----i~~~-~~~~~~p~~~~~s~~---~~~li~~l~-~~p~~R~~~~~~~ei~~h 305 (382)
T cd05625 236 VILYEMLVGQPPFLAQTPLETQMK----VINW-QTSLHIPPQAKLSPE---ASDLIIKLC-RGPEDRLGKNGADEIKAH 305 (382)
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHH----HHcc-CCCcCCCCcccCCHH---HHHHHHHHc-cCHhHcCCCCCHHHHhcC
Confidence 999999999999975432111110 0000 011111111111111 445566655 59999997 8887753
No 108
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=4.6e-40 Score=313.53 Aligned_cols=259 Identities=25% Similarity=0.395 Sum_probs=204.4
Q ss_pred hCccccceeeeeCCceEEEEEc------CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL------PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKC 243 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 243 (468)
.+|.+.+.||+|+||.||+|.. .++..+++|.+...... ..+.+.+|++++++++|+||+++++++.....
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLA---ARKDFQREAELLTNLQHEHIVKFYGVCGDGDP 81 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHH---HHHHHHHHHHHHhcCCCCCcceEEEEEccCCc
Confidence 4578889999999999999964 23566899988755432 34678899999999999999999999999999
Q ss_pred EEEEEEeccCCChhhhhhcCcc-------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC
Q 012219 244 MFLIYEYMEMGSLFCVLRTDEE-------------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS 310 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~ 310 (468)
.++||||+++++|.+++..... ...+++..++.++.||+.|++||| +.+++||||||+||+++.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~Nil~~~ 158 (291)
T cd05094 82 LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATRNCLVGA 158 (291)
T ss_pred eEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEcc
Confidence 9999999999999999975321 234789999999999999999999 789999999999999999
Q ss_pred CCCeEEeeccccccccCCCC--CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhc
Q 012219 311 ELEAFVADFGVARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDK 387 (468)
Q Consensus 311 ~~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~ 387 (468)
++.++|+|||+++....... ......++..|+|||++.+..++.++|||||||++|||+| |+.||...........
T Consensus 159 ~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~- 237 (291)
T cd05094 159 NLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIEC- 237 (291)
T ss_pred CCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-
Confidence 99999999999976543221 1122346788999999998899999999999999999999 9999865432111000
Q ss_pred ccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 388 NIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
......+..... ....+.+++.+||+.+|++||++++|++.|.+..+.
T Consensus 238 ---~~~~~~~~~~~~-------~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 238 ---ITQGRVLERPRV-------CPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred ---HhCCCCCCCCcc-------CCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 000000001111 112377899999999999999999999999988654
No 109
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.5e-40 Score=328.36 Aligned_cols=254 Identities=23% Similarity=0.327 Sum_probs=196.1
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|+||.||++.. .+++.||+|++...........+.+.+|++++++++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 3688899999999999999964 578999999997654433345677889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.+...
T Consensus 81 E~~~gg~L~~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH---~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~ 154 (377)
T cd05629 81 EFLPGGDLMTMLIKYD---TFSEDVTRFYMAECVLAIEAVH---KLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQ 154 (377)
T ss_pred eCCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEEeecccccccccc
Confidence 9999999999987543 3788888999999999999999 789999999999999999999999999998633110
Q ss_pred CC-----------------------------------------------CceeccccccccccccccCCCCCccchhhHH
Q 012219 329 SS-----------------------------------------------NRTLLAGTYGYIAPELAYTMVVTEKCDVYSF 361 (468)
Q Consensus 329 ~~-----------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~ 361 (468)
.. ......||+.|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSl 234 (377)
T cd05629 155 HDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSL 234 (377)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEec
Confidence 00 0012468999999999999899999999999
Q ss_pred HHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCC---CCHHHHHHH
Q 012219 362 GVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSR---PTMQLVSNE 438 (468)
Q Consensus 362 Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R---Ps~~~v~~~ 438 (468)
||++|||+||+.||........ ..........+ .+... .... ..+.+++.+|+. +|.+| |++.+++.+
T Consensus 235 Gvil~elltG~~Pf~~~~~~~~-~~~i~~~~~~~--~~p~~--~~~s---~~~~dli~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 235 GAIMFECLIGWPPFCSENSHET-YRKIINWRETL--YFPDD--IHLS---VEAEDLIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred chhhhhhhcCCCCCCCCCHHHH-HHHHHccCCcc--CCCCC--CCCC---HHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 9999999999999975432111 11000000000 01110 0011 125678888997 66665 599998865
No 110
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2.2e-40 Score=321.69 Aligned_cols=260 Identities=24% Similarity=0.378 Sum_probs=200.7
Q ss_pred hhCccccceeeeeCCceEEEEEcC------CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeC
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHR 241 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 241 (468)
.++|.+.+.||+|+||.||+|... +++.||+|++...... ...+.+..|++++.++ +|+||++++++|...
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~ 83 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATA--SEYKALMTELKILIHIGHHLNVVNLLGACTKP 83 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCH--HHHHHHHHHHHHHHhhccCcchhheeeeEecC
Confidence 457899999999999999999532 3578999999754432 2346678899999999 899999999988754
Q ss_pred -CEEEEEEEeccCCChhhhhhcCcc-------------------------------------------------------
Q 012219 242 -KCMFLIYEYMEMGSLFCVLRTDEE------------------------------------------------------- 265 (468)
Q Consensus 242 -~~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------------- 265 (468)
...++++||+++|+|.+++.....
T Consensus 84 ~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (337)
T cd05054 84 GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGD 163 (337)
T ss_pred CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhh
Confidence 568899999999999998864221
Q ss_pred ---cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCC--Cceecccccc
Q 012219 266 ---AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSS--NRTLLAGTYG 340 (468)
Q Consensus 266 ---~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~ 340 (468)
...+++..+..++.||+.||+||| +.+|+||||||+||+++.++.++|+|||+++.+..... ......++..
T Consensus 164 ~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~ 240 (337)
T cd05054 164 ELYKEPLTLEDLISYSFQVARGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLK 240 (337)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcc
Confidence 125789999999999999999999 78999999999999999999999999999987633221 1122345678
Q ss_pred ccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHH
Q 012219 341 YIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAF 419 (468)
Q Consensus 341 y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 419 (468)
|+|||++.+..++.++|||||||++|||++ |+.||............ ......+..... ....+.+++.
T Consensus 241 y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~-------~~~~~~~l~~ 310 (337)
T cd05054 241 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRR---LKEGTRMRAPEY-------ATPEIYSIML 310 (337)
T ss_pred ccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHH---HhccCCCCCCcc-------CCHHHHHHHH
Confidence 999999999999999999999999999998 99998653221111000 000000011111 1123778999
Q ss_pred hcccCCCCCCCCHHHHHHHHHhcC
Q 012219 420 SCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 420 ~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
+||+.+|++||++.+++++|.+..
T Consensus 311 ~cl~~~p~~RPs~~ell~~l~~~~ 334 (337)
T cd05054 311 DCWHNNPEDRPTFSELVEILGDLL 334 (337)
T ss_pred HHccCChhhCcCHHHHHHHHHHHH
Confidence 999999999999999999998753
No 111
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=4.2e-40 Score=313.32 Aligned_cols=259 Identities=25% Similarity=0.419 Sum_probs=203.8
Q ss_pred hCccccceeeeeCCceEEEEEc------CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL------PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKC 243 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 243 (468)
++|.+.+.||+|+||.||++.. .++..+|+|.+...... ..+.+.+|++++.+++||||+++++++...+.
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDN---ARKDFHREAELLTNLQHEHIVKFYGVCVEGDP 81 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHH---HHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Confidence 5688899999999999999974 23456899988754432 34678899999999999999999999999999
Q ss_pred EEEEEEeccCCChhhhhhcCc----------ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCC
Q 012219 244 MFLIYEYMEMGSLFCVLRTDE----------EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELE 313 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~ 313 (468)
.++|+||+++++|.+++.... ....+++.+++.++.|++.||+||| +.+++||||||+||++++++.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH---~~~i~H~dlkp~Nili~~~~~ 158 (288)
T cd05093 82 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLL 158 (288)
T ss_pred cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccCcceEEEccCCc
Confidence 999999999999999987532 1234899999999999999999999 789999999999999999999
Q ss_pred eEEeeccccccccCCCC--CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccc
Q 012219 314 AFVADFGVARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIK 390 (468)
Q Consensus 314 ~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~ 390 (468)
++|+|||+++....... ......++..|+|||++.+..++.++|||||||++|||+| |+.||........ ...
T Consensus 159 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~-~~~--- 234 (288)
T cd05093 159 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEV-IEC--- 234 (288)
T ss_pred EEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHH-HHH---
Confidence 99999999976532221 1122335678999999998899999999999999999998 9999865432111 000
Q ss_pred cccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 391 LIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
+............+ ..+.+++.+||+.+|.+|||++++...|+++.+.
T Consensus 235 i~~~~~~~~~~~~~-------~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 235 ITQGRVLQRPRTCP-------KEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred HHcCCcCCCCCCCC-------HHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 00000011111111 1277899999999999999999999999887643
No 112
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=3.4e-40 Score=308.44 Aligned_cols=250 Identities=26% Similarity=0.431 Sum_probs=199.4
Q ss_pred hCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
.+|++.+.||+|+||.||+|...++..+|+|.+...... ...|.+|++++++++|+||+++++++...+..++|+|
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMS----EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTE 79 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCC----HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEe
Confidence 357788999999999999998877888999998754332 2468889999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|+++++|.+++..... .+++..++.++.|++.||+||| +.+++||||||+||+++.++.+||+|||+++......
T Consensus 80 ~~~~~~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~ 154 (256)
T cd05059 80 YMANGCLLNYLRERKG--KLGTEWLLDMCSDVCEAMEYLE---SNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQ 154 (256)
T ss_pred cCCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHhhEEECCCCcEEECCcccceeccccc
Confidence 9999999999975433 4889999999999999999999 7899999999999999999999999999987653221
Q ss_pred CCc-eeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 330 SNR-TLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 330 ~~~-~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
... ....++..|+|||...+..++.++||||||+++||+++ |+.||+......... ..............
T Consensus 155 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~~---- 226 (256)
T cd05059 155 YTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVE----SVSAGYRLYRPKLA---- 226 (256)
T ss_pred ccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHH----HHHcCCcCCCCCCC----
Confidence 111 11123457999999998899999999999999999999 899987543221111 11111111111111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
...+.+++.+||+.+|++|||+.++++.|
T Consensus 227 ---~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 227 ---PTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred ---CHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 12377899999999999999999999876
No 113
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.4e-40 Score=303.88 Aligned_cols=264 Identities=24% Similarity=0.290 Sum_probs=202.5
Q ss_pred hCccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCc-eeeEEEEEeeCC-----
Q 012219 170 EDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRN-IVKLYGFCLHRK----- 242 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~----- 242 (468)
..|...++||+|+||+||+|+ ..+|+.||+|++......+. ......+|+.+++.++|+| ||++.+++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG-~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEG-VPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccC-CCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 346667779999999999996 45789999999987655322 2345569999999999999 999999999877
Q ss_pred -EEEEEEEeccCCChhhhhhcCccc-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecc
Q 012219 243 -CMFLIYEYMEMGSLFCVLRTDEEA-VGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFG 320 (468)
Q Consensus 243 -~~~lv~e~~~~gsL~~~l~~~~~~-~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 320 (468)
..++|+||++. +|..++...... ..++...+..++.||++||+||| +++|+||||||+||+++++|.+||+|||
T Consensus 90 ~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H---~~~IlHRDLKPQNlLi~~~G~lKlaDFG 165 (323)
T KOG0594|consen 90 GKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLH---SHGILHRDLKPQNLLISSSGVLKLADFG 165 (323)
T ss_pred ceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCcceEEECCCCcEeeeccc
Confidence 78999999974 899998765532 34677888999999999999999 8899999999999999999999999999
Q ss_pred ccccccCCCCCceeccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCCccccc----------------ch
Q 012219 321 VARLLNFDSSNRTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGELLSSS----------------SW 383 (468)
Q Consensus 321 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~----------------~~ 383 (468)
+|+....+....+..++|..|+|||++.+. .|+...||||+|||++||++++.-|...... .|
T Consensus 166 lAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~W 245 (323)
T KOG0594|consen 166 LARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDW 245 (323)
T ss_pred hHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCC
Confidence 999887666667777899999999998876 7999999999999999999999888654331 11
Q ss_pred hhhcccccccccCCCCC--CccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 384 SLDKNIKLIDLLDPRLS--PPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 384 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.........+..-+... ...............+++.+|++.+|.+|.|++.++++
T Consensus 246 p~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 246 PGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 11000000000000000 00000001111236678999999999999999988876
No 114
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=1.1e-40 Score=329.39 Aligned_cols=253 Identities=22% Similarity=0.325 Sum_probs=195.5
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
+|++.+.||+|+||.||+++. .+++.||+|++...........+.+.+|++++.+++|+||+++++.+.+.+..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 688899999999999999975 4689999999976544333345678899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|+++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++..+....
T Consensus 82 ~~~~g~L~~~i~~~~---~~~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 82 YIPGGDMMSLLIRLG---IFEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred CCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccc
Confidence 999999999997643 3788888899999999999999 7899999999999999999999999999975321000
Q ss_pred -------------------------------------------CCceeccccccccccccccCCCCCccchhhHHHHHHH
Q 012219 330 -------------------------------------------SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVAL 366 (468)
Q Consensus 330 -------------------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~ 366 (468)
.......||+.|+|||++.+..++.++|||||||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 0011246899999999999999999999999999999
Q ss_pred HHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCC---CHHHHHHH
Q 012219 367 EVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRP---TMQLVSNE 438 (468)
Q Consensus 367 el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RP---s~~~v~~~ 438 (468)
||++|+.||............ .... .....+....... .+.+++.+|+ .+|++|+ ++.+++++
T Consensus 236 ell~G~~Pf~~~~~~~~~~~i-~~~~----~~~~~~~~~~~s~---~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 236 EMLVGQPPFLADTPAETQLKV-INWE----TTLHIPSQAKLSR---EASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred ehhhCCCCCCCCCHHHHHHHH-hccC----ccccCCCCCCCCH---HHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 999999999754322111110 0000 0000000000111 1445666765 5999999 88998855
No 115
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=4.1e-40 Score=312.57 Aligned_cols=256 Identities=21% Similarity=0.384 Sum_probs=199.8
Q ss_pred hCccccceeeeeCCceEEEEEc-----CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-----PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCM 244 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 244 (468)
++|++.+.||+|+||.||+|.. .++..+++|.+...... .....|.+|++++++++||||+++++++......
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 82 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNP--QQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPV 82 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCH--HHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCce
Confidence 4678889999999999999973 35678999999754332 2346788999999999999999999999999999
Q ss_pred EEEEEeccCCChhhhhhcCcc--------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC
Q 012219 245 FLIYEYMEMGSLFCVLRTDEE--------------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS 310 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~--------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~ 310 (468)
+++|||+++++|.+++..... ...+++.+.+.++.|++.||+||| +.+++||||||+||+++.
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~nili~~ 159 (283)
T cd05090 83 CMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS---SHFFVHKDLAARNILIGE 159 (283)
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hcCeehhccccceEEEcC
Confidence 999999999999999853211 234788899999999999999999 779999999999999999
Q ss_pred CCCeEEeeccccccccCCCC--CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhc
Q 012219 311 ELEAFVADFGVARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDK 387 (468)
Q Consensus 311 ~~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~ 387 (468)
++.+||+|||+++....... ......++..|+|||++.+..++.++||||||+++|||++ |..||........ ...
T Consensus 160 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~-~~~ 238 (283)
T cd05090 160 QLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEV-IEM 238 (283)
T ss_pred CCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-HHH
Confidence 99999999999976532221 1222345678999999988889999999999999999998 9999864332111 000
Q ss_pred ccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHh
Q 012219 388 NIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIA 441 (468)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~ 441 (468)
...... ........ ..+.+++.+||+.||++||++.++.+.|..
T Consensus 239 -~~~~~~--~~~~~~~~-------~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 239 -VRKRQL--LPCSEDCP-------PRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred -HHcCCc--CCCCCCCC-------HHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 000000 01111111 226678999999999999999999998864
No 116
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.8e-40 Score=324.84 Aligned_cols=255 Identities=22% Similarity=0.274 Sum_probs=194.2
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
.+|.+.+.||+|+||.||++.. .+++.||+|.... +.+.+|++++++++||||+++++++......++|+
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~---------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~ 162 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR---------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLIL 162 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh---------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEE
Confidence 5799999999999999999965 5788999997532 34568999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC-
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF- 327 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~- 327 (468)
|++. ++|.+++.... .+++..++.++.||+.||.||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 163 e~~~-~~L~~~l~~~~---~l~~~~~~~i~~qi~~aL~ylH---~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~ 235 (391)
T PHA03212 163 PRYK-TDLYCYLAAKR---NIAICDILAIERSVLRAIQYLH---ENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDI 235 (391)
T ss_pred ecCC-CCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHhEEEcCCCCEEEEeCCcccccccc
Confidence 9995 68888886543 3889999999999999999999 77999999999999999999999999999975422
Q ss_pred CCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccc------hhhhcc-------------
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSS------WSLDKN------------- 388 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~------~~~~~~------------- 388 (468)
.........||+.|+|||++.+..++.++|||||||++|||+||+.|+-...... ......
T Consensus 236 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~ 315 (391)
T PHA03212 236 NANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPI 315 (391)
T ss_pred cccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCc
Confidence 1122334579999999999999899999999999999999999998753211100 000000
Q ss_pred ---ccccc---------ccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH-HHHh
Q 012219 389 ---IKLID---------LLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN-EFIA 441 (468)
Q Consensus 389 ---~~~~~---------~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~-~l~~ 441 (468)
..... ...+...+ ...........+.+++.+||+.||++|||++|+++ .++.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~ 380 (391)
T PHA03212 316 DAQANLDEIYIGLAKKSSRKPGSRP-LWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQ 380 (391)
T ss_pred chhHHHHHHHHHHHhccCCCCCCCC-CHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhc
Confidence 00000 00000000 01111122234778999999999999999999984 4443
No 117
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=8.2e-41 Score=324.47 Aligned_cols=255 Identities=26% Similarity=0.337 Sum_probs=200.4
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|+||.||++.. .+++.||+|+++..........+.+.+|+.+++.++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 3688899999999999999975 478999999998655433345567889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++|+|.+++..... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~l~~~~~--~l~~~~~~~~~~qi~~aL~~lH---~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~ 155 (330)
T cd05601 81 EYQPGGDLLSLLNRYED--QFDEDMAQFYLAELVLAIHSVH---QMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTAN 155 (330)
T ss_pred CCCCCCCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeEcccCchHheEECCCCCEEeccCCCCeECCCC
Confidence 99999999999976532 4889999999999999999999 789999999999999999999999999999876433
Q ss_pred CCC-ceecccccccccccccc------CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 329 SSN-RTLLAGTYGYIAPELAY------TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 329 ~~~-~~~~~g~~~y~aPE~~~------~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
... .....||+.|+|||++. ...++.++|||||||++|||++|+.||......... ................
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~-~~i~~~~~~~~~~~~~ 234 (330)
T cd05601 156 KMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTY-NNIMNFQRFLKFPEDP 234 (330)
T ss_pred CceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHH-HHHHcCCCccCCCCCC
Confidence 222 22346899999999986 456788999999999999999999999754322111 1000001111100001
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
... . .+.+++.+|++ +|++||++++++.+
T Consensus 235 ~~~----~---~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 235 KVS----S---DFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred CCC----H---HHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 111 1 25668888997 99999999998853
No 118
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-41 Score=313.27 Aligned_cols=256 Identities=25% Similarity=0.320 Sum_probs=195.9
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhh-----------hhhHHHHHHHHHHHhhccCCceeeEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEE-----------LASLESFGNEARLLSQIRHRNIVKLYG 236 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-----------~~~~~~~~~e~~~l~~l~h~niv~l~~ 236 (468)
.++|++...||+|.||.|-+|+. .+++.||+|++.+..... ....+...+|+.+|++++|||||++++
T Consensus 96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiE 175 (576)
T KOG0585|consen 96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIE 175 (576)
T ss_pred hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEE
Confidence 46899999999999999999974 579999999997543221 123457889999999999999999999
Q ss_pred EEeeC--CEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCe
Q 012219 237 FCLHR--KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEA 314 (468)
Q Consensus 237 ~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~ 314 (468)
+..++ +..|||+|||..|.+...=. ....++..++++++.++..||+||| .+|||||||||+|+|++++|+|
T Consensus 176 vLDDP~s~~~YlVley~s~G~v~w~p~---d~~els~~~Ar~ylrDvv~GLEYLH---~QgiiHRDIKPsNLLl~~~g~V 249 (576)
T KOG0585|consen 176 VLDDPESDKLYLVLEYCSKGEVKWCPP---DKPELSEQQARKYLRDVVLGLEYLH---YQGIIHRDIKPSNLLLSSDGTV 249 (576)
T ss_pred eecCcccCceEEEEEeccCCccccCCC---CcccccHHHHHHHHHHHHHHHHHHH---hcCeeccccchhheEEcCCCcE
Confidence 98764 56999999999888754322 1122899999999999999999999 7799999999999999999999
Q ss_pred EEeeccccccccCC-----CCCceeccccccccccccccCCC----CCccchhhHHHHHHHHHHhCCCCCCcccccchhh
Q 012219 315 FVADFGVARLLNFD-----SSNRTLLAGTYGYIAPELAYTMV----VTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSL 385 (468)
Q Consensus 315 kl~Dfg~~~~~~~~-----~~~~~~~~g~~~y~aPE~~~~~~----~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~ 385 (468)
||+|||.+...... .......+||+.|+|||...++. .+.+.||||+||+||.|+.|+.||-.....
T Consensus 250 KIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~---- 325 (576)
T KOG0585|consen 250 KISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFEL---- 325 (576)
T ss_pred EeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHH----
Confidence 99999999766321 11122368999999999887632 356789999999999999999998643211
Q ss_pred hcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 012219 386 DKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFI 440 (468)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~ 440 (468)
.... +++...+.-+... +.-..+.+++.++|++||++|.+..+|..+..
T Consensus 326 ~l~~---KIvn~pL~fP~~p---e~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpw 374 (576)
T KOG0585|consen 326 ELFD---KIVNDPLEFPENP---EINEDLKDLIKRLLEKDPEQRITLPDIKLHPW 374 (576)
T ss_pred HHHH---HHhcCcccCCCcc---cccHHHHHHHHHHhhcChhheeehhhheecce
Confidence 1111 1111122211111 11122668999999999999999999885553
No 119
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=5.8e-40 Score=310.87 Aligned_cols=258 Identities=26% Similarity=0.382 Sum_probs=198.2
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCC----EEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGK----VVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCM 244 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 244 (468)
++|.+.+.||+|+||.||+|.+ .+++ .+++|.+...... ....++..|+..+++++||||+++++++.. ...
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~ 83 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGR--QTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASL 83 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccch--HHHHHHHHHHHHHhcCCCCCcceEEEEECC-Ccc
Confidence 4678889999999999999975 3444 4778887543221 234577788889999999999999999864 456
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
++++||+++|+|.+++.... ..+++..+..++.||+.||+||| +.+++||||||+||+++.++.+||+|||+++.
T Consensus 84 ~~i~e~~~~gsL~~~l~~~~--~~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~ 158 (279)
T cd05111 84 QLVTQLSPLGSLLDHVRQHR--DSLDPQRLLNWCVQIAKGMYYLE---EHRMVHRNLAARNILLKSDSIVQIADFGVADL 158 (279)
T ss_pred EEEEEeCCCCcHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEEcCCcccee
Confidence 78999999999999997543 24899999999999999999999 78999999999999999999999999999986
Q ss_pred ccCCCC--CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 325 LNFDSS--NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 325 ~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
...... ......++..|+|||++.+..++.++|||||||++||+++ |+.||........... .........+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~-- 235 (279)
T cd05111 159 LYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDL-LEKGERLAQPQI-- 235 (279)
T ss_pred ccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-HHCCCcCCCCCC--
Confidence 543221 1223446778999999998899999999999999999998 9999875432211000 000000001111
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCCC
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKAP 446 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~~ 446 (468)
. ...+.+++.+||..+|++|||+.++.+.|..+..++
T Consensus 236 -~-------~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~ 272 (279)
T cd05111 236 -C-------TIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDP 272 (279)
T ss_pred -C-------CHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence 1 112567889999999999999999999998865443
No 120
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=2.9e-40 Score=335.36 Aligned_cols=256 Identities=23% Similarity=0.306 Sum_probs=200.8
Q ss_pred HhhCccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC----
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK---- 242 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~---- 242 (468)
..++|.+.+.||+|+||+||+|+ ..+++.||||++....... .....+.+|+..+..++|+|++++.+.+....
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~-~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~ 108 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSE-ADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP 108 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCH-HHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence 34689999999999999999996 4579999999997654322 23466889999999999999999987765322
Q ss_pred ----EEEEEEEeccCCChhhhhhcCc-ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEe
Q 012219 243 ----CMFLIYEYMEMGSLFCVLRTDE-EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVA 317 (468)
Q Consensus 243 ----~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~ 317 (468)
..++||||+++|+|.+++.... ....+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+
T Consensus 109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH---~~~IiHrDLKP~NILl~~~~~vkL~ 185 (496)
T PTZ00283 109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVH---SKHMIHRDIKSANILLCSNGLVKLG 185 (496)
T ss_pred ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEeCCCCEEEE
Confidence 3689999999999999986532 2345889999999999999999999 7899999999999999999999999
Q ss_pred eccccccccCC--CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccccccccc
Q 012219 318 DFGVARLLNFD--SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLL 395 (468)
Q Consensus 318 Dfg~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 395 (468)
|||+++.+... ........||+.|+|||++.+..++.++|||||||++|||++|+.||............ .....
T Consensus 186 DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~---~~~~~ 262 (496)
T PTZ00283 186 DFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKT---LAGRY 262 (496)
T ss_pred ecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH---hcCCC
Confidence 99999875432 12223457899999999999999999999999999999999999999754321111000 00001
Q ss_pred CCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 396 DPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
+ .+..... ..+.+++.+||+.||++||++.+++++
T Consensus 263 ~-~~~~~~~-------~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 263 D-PLPPSIS-------PEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred C-CCCCCCC-------HHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 1 1111111 126679999999999999999999864
No 121
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=3.6e-40 Score=318.69 Aligned_cols=244 Identities=21% Similarity=0.326 Sum_probs=193.9
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CCceeeEEEEEeeCCEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIR-HRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 248 (468)
+|+..+.||+|+||.||+|.. .+++.||+|++...........+.+..|.+++..+. |++|+++.+++...+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 367788999999999999975 468999999998654433334567788999988886 577888999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++|+|.+++.... .+++.++..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 Ey~~~g~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH---~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~ 154 (323)
T cd05615 81 EYVNGGDLMYHIQQVG---KFKEPQAVFYAAEISVGLFFLH---RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD 154 (323)
T ss_pred cCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEeccccccccCCC
Confidence 9999999999987543 3899999999999999999999 789999999999999999999999999998764333
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
........|++.|+|||++.+..++.++|||||||++|||+||+.||......... .. +.. ..........
T Consensus 155 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~-~~---i~~-~~~~~p~~~~---- 225 (323)
T cd05615 155 GVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELF-QS---IME-HNVSYPKSLS---- 225 (323)
T ss_pred CccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHH-HH---HHh-CCCCCCccCC----
Confidence 33334456899999999999889999999999999999999999999754321110 00 000 0111111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCH
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPTM 432 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs~ 432 (468)
. .+.+++.+|++.+|.+|++.
T Consensus 226 ~---~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 226 K---EAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred H---HHHHHHHHHcccCHhhCCCC
Confidence 1 25678999999999999984
No 122
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=5e-40 Score=342.85 Aligned_cols=263 Identities=24% Similarity=0.380 Sum_probs=203.5
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|+||.||+|.. .+++.||+|++...........+.|.+|++++++++||||+++++++.+.+..+++|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 4788999999999999999975 468999999997654333334567999999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCc--------ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecc
Q 012219 249 EYMEMGSLFCVLRTDE--------EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFG 320 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~--------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 320 (468)
||+++|+|.+++.... .....++..++.++.||+.||+||| +.+|+||||||+||+++.++.++|+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH---s~GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH---SKGVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH---HCCccccCCchheEEEcCCCCEEEEecC
Confidence 9999999999886421 1223567788999999999999999 7899999999999999999999999999
Q ss_pred ccccccCCC------------------CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccc
Q 012219 321 VARLLNFDS------------------SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSS 382 (468)
Q Consensus 321 ~~~~~~~~~------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~ 382 (468)
+++...... .......||+.|+|||++.+..++.++|||||||++|||+||+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 998662110 01112468999999999999999999999999999999999999986532211
Q ss_pred hhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCC-HHHHHHHHHhcCC
Q 012219 383 WSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPT-MQLVSNEFIARNK 444 (468)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-~~~v~~~l~~~~~ 444 (468)
.... ....++....+.. .....+.+++.+|++.||++||+ ++++.+.|+....
T Consensus 239 i~~~-----~~i~~P~~~~p~~----~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 239 ISYR-----DVILSPIEVAPYR----EIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred hhhh-----hhccChhhccccc----cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 1100 0111111000000 11123667899999999999965 5778887776543
No 123
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=6.8e-40 Score=307.12 Aligned_cols=253 Identities=26% Similarity=0.418 Sum_probs=202.1
Q ss_pred hhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
.++|++.+.||+|+||.||+|...+++.||+|.+...... ...|.+|+.++++++|+|++++++++. .+..++++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~ 79 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMS----PEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIIT 79 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCCc----HHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEE
Confidence 3578889999999999999999888999999999765432 357889999999999999999999874 45689999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++++|.+++.... ...+++.+++.++.|++.||+||| +.+++||||||+||+++.++.++|+|||++......
T Consensus 80 e~~~~~~L~~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 155 (260)
T cd05067 80 EYMENGSLVDFLKTPE-GIKLTINKLIDMAAQIAEGMAFIE---RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDN 155 (260)
T ss_pred EcCCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHHhEEEcCCCCEEEccCcceeecCCC
Confidence 9999999999987543 235899999999999999999999 789999999999999999999999999999765422
Q ss_pred C-CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchh
Q 012219 329 S-SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQK 406 (468)
Q Consensus 329 ~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (468)
. .......++..|+|||++....++.++||||||+++||+++ |+.||........... .............
T Consensus 156 ~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~--- 228 (260)
T cd05067 156 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQN----LERGYRMPRPDNC--- 228 (260)
T ss_pred CcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHH----HHcCCCCCCCCCC---
Confidence 1 11222345678999999988889999999999999999999 9999975432211110 0010111111111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHh
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIA 441 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~ 441 (468)
...+.+++.+|++.+|++||+++++.+.|+.
T Consensus 229 ----~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 229 ----PEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred ----CHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 1237789999999999999999999998864
No 124
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=5.9e-40 Score=306.05 Aligned_cols=247 Identities=25% Similarity=0.375 Sum_probs=193.7
Q ss_pred ceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEeccCC
Q 012219 176 YCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYMEMG 254 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 254 (468)
+.||+|+||.||+|.. .+++.+|+|.+...... .....|.+|++++++++||||+++++++......++|+||++++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPP--DLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG 78 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCH--HHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCC
Confidence 3589999999999976 47889999988654322 23467889999999999999999999999999999999999999
Q ss_pred ChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCc--
Q 012219 255 SLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNR-- 332 (468)
Q Consensus 255 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~-- 332 (468)
+|.+++.... ..+++..++.++.|++.||.||| +.+++||||||+||+++.++.+||+|||++..........
T Consensus 79 ~L~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 153 (252)
T cd05084 79 DFLTFLRTEG--PRLKVKELIQMVENAAAGMEYLE---SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTG 153 (252)
T ss_pred cHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEEcCCCcEEECccccCcccccccccccC
Confidence 9999987543 24789999999999999999999 7899999999999999999999999999987543211111
Q ss_pred eeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHH
Q 012219 333 TLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDI 411 (468)
Q Consensus 333 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (468)
.....+..|+|||.+.+..++.++||||||+++|||++ |..||.......... .............. .
T Consensus 154 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~----~~~~~~~~~~~~~~-------~ 222 (252)
T cd05084 154 GMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTRE----AIEQGVRLPCPELC-------P 222 (252)
T ss_pred CCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHH----HHHcCCCCCCcccC-------C
Confidence 11123457999999998889999999999999999998 889986543211100 00000111111111 1
Q ss_pred HHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 012219 412 ILVSTVAFSCLRSQPKSRPTMQLVSNEFI 440 (468)
Q Consensus 412 ~~l~~l~~~cl~~dP~~RPs~~~v~~~l~ 440 (468)
..+.+++.+|++.+|++|||++++.+.|+
T Consensus 223 ~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 223 DAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 23778999999999999999999998875
No 125
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=6.2e-40 Score=312.48 Aligned_cols=258 Identities=26% Similarity=0.413 Sum_probs=201.4
Q ss_pred CccccceeeeeCCceEEEEEcC------CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCM 244 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 244 (468)
+|.+.+.||+|+||.||+|... ....+++|.+...... ...+.+.+|+.+++.++||||+++++.+...+..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 78 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASS--SELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPL 78 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCH--HHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCc
Confidence 4677889999999999999642 3357899988755432 2346788999999999999999999999999999
Q ss_pred EEEEEeccCCChhhhhhcCc---------------------ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 012219 245 FLIYEYMEMGSLFCVLRTDE---------------------EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISS 303 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~---------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~ 303 (468)
++++||+.+|+|.+++.... ....+++..++.++.|++.||.||| +.+++||||||
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~ivH~dikp 155 (290)
T cd05045 79 LLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA---EMKLVHRDLAA 155 (290)
T ss_pred EEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH---HCCeehhhhhh
Confidence 99999999999999886421 1234789999999999999999999 78999999999
Q ss_pred CceeeCCCCCeEEeeccccccccCCCCC--ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccc
Q 012219 304 NNVLLNSELEAFVADFGVARLLNFDSSN--RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSS 380 (468)
Q Consensus 304 ~NIll~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~ 380 (468)
+||++++++.+||+|||+++........ .....++..|+|||+..+..++.++||||||+++|||+| |+.||.....
T Consensus 156 ~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~ 235 (290)
T cd05045 156 RNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP 235 (290)
T ss_pred heEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH
Confidence 9999999999999999999765322211 122345678999999988889999999999999999999 9999865432
Q ss_pred cchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCC
Q 012219 381 SSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNK 444 (468)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~ 444 (468)
.... +.............. ...+.+++.+|++.+|++||++.+++..|+++..
T Consensus 236 ~~~~--------~~~~~~~~~~~~~~~---~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 236 ERLF--------NLLKTGYRMERPENC---SEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred HHHH--------HHHhCCCCCCCCCCC---CHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 2111 111111111111111 1236789999999999999999999999987643
No 126
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=7.4e-41 Score=323.02 Aligned_cols=240 Identities=23% Similarity=0.314 Sum_probs=191.4
Q ss_pred ceeeeeCCceEEEEEc----CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEec
Q 012219 176 YCIGTGGYGSVYRARL----PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYM 251 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 251 (468)
+.||+|+||.||+++. .+|+.+|+|++....... .....+.+|++++++++||||+++++++...+..++||||+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 80 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKV-RDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFL 80 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhh-hhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCC
Confidence 5699999999999864 468899999997644322 23345778999999999999999999999999999999999
Q ss_pred cCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCC
Q 012219 252 EMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSN 331 (468)
Q Consensus 252 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 331 (468)
++|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++........
T Consensus 81 ~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~ 154 (318)
T cd05582 81 RGGDLFTRLSKEV---MFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK 154 (318)
T ss_pred CCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCc
Confidence 9999999986543 3899999999999999999999 789999999999999999999999999999765433333
Q ss_pred ceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHH
Q 012219 332 RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDI 411 (468)
Q Consensus 332 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (468)
.....|++.|+|||++....++.++|||||||++|||++|+.||........... +.. ....+..... .
T Consensus 155 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~----i~~-~~~~~p~~~~----~-- 223 (318)
T cd05582 155 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTM----ILK-AKLGMPQFLS----P-- 223 (318)
T ss_pred eecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHH----HHc-CCCCCCCCCC----H--
Confidence 3446789999999999988899999999999999999999999975432111100 000 0011111111 1
Q ss_pred HHHHHHHHhcccCCCCCCCCHHH
Q 012219 412 ILVSTVAFSCLRSQPKSRPTMQL 434 (468)
Q Consensus 412 ~~l~~l~~~cl~~dP~~RPs~~~ 434 (468)
.+.+++.+||+.||++||++.+
T Consensus 224 -~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 224 -EAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred -HHHHHHHHHhhcCHhHcCCCCC
Confidence 2567899999999999999533
No 127
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.8e-40 Score=324.72 Aligned_cols=256 Identities=24% Similarity=0.344 Sum_probs=196.7
Q ss_pred HhhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEE
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (468)
..++|++.+.||+|+||.||+++.. +++.+|+|++...........+.+.+|+.+++.++||||+++++++..+...++
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 3568999999999999999999764 688999999975433333344568899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccccc
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLN 326 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 326 (468)
||||+++|+|.+++... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+++...
T Consensus 121 v~Ey~~gg~L~~~l~~~----~~~~~~~~~~~~qil~aL~~LH---~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~ 193 (370)
T cd05621 121 VMEYMPGGDLVNLMSNY----DVPEKWAKFYTAEVVLALDAIH---SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMD 193 (370)
T ss_pred EEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEEecccceecc
Confidence 99999999999998643 3788889999999999999999 7899999999999999999999999999998764
Q ss_pred CCCC-CceeccccccccccccccCC----CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 327 FDSS-NRTLLAGTYGYIAPELAYTM----VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 327 ~~~~-~~~~~~g~~~y~aPE~~~~~----~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
.... ......||+.|+|||++... .++.++||||+||++|||++|+.||........ .. .+... ...+..
T Consensus 194 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~-~~---~i~~~-~~~~~~ 268 (370)
T cd05621 194 ETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGT-YS---KIMDH-KNSLNF 268 (370)
T ss_pred cCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHH-HH---HHHhC-CcccCC
Confidence 3222 22345799999999998654 378899999999999999999999975432111 01 00000 000111
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCC--CCCHHHHHHH
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKS--RPTMQLVSNE 438 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~~v~~~ 438 (468)
+....... .+.+++.+|+..++.+ ||++.+++++
T Consensus 269 p~~~~~s~---~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 269 PEDVEISK---HAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred CCcccCCH---HHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 11111111 2456777888755543 8899999865
No 128
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1.1e-39 Score=309.73 Aligned_cols=259 Identities=26% Similarity=0.369 Sum_probs=198.4
Q ss_pred ccccceeeeeCCceEEEEE-----cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC--CEE
Q 012219 172 FHIKYCIGTGGYGSVYRAR-----LPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR--KCM 244 (468)
Q Consensus 172 ~~~~~~lg~G~~g~Vy~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 244 (468)
|...+.||+|+||+||.+. ..+++.||+|.+...... .....|.+|+++++.++||||+++++++... ...
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQ--QNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGL 83 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccCh--HHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceE
Confidence 3778899999999998864 246788999999765432 2346788999999999999999999988753 458
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
+++|||+++|+|.+++... .+++.+++.++.|++.||.||| +.+|+||||||+||+++.++.++|+|||+++.
T Consensus 84 ~lv~e~~~~~~l~~~~~~~----~l~~~~~~~i~~~l~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~ 156 (283)
T cd05080 84 QLIMEYVPLGSLRDYLPKH----KLNLAQLLLFAQQICEGMAYLH---SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKA 156 (283)
T ss_pred EEEecCCCCCCHHHHHHHc----CCCHHHHHHHHHHHHHHHHHHH---HCCeeccccChheEEEcCCCcEEEeecccccc
Confidence 9999999999999998653 3899999999999999999999 78999999999999999999999999999986
Q ss_pred ccCCCCC---ceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhh-------cccccccc
Q 012219 325 LNFDSSN---RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLD-------KNIKLIDL 394 (468)
Q Consensus 325 ~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~-------~~~~~~~~ 394 (468)
....... .....++..|+|||......++.++||||||+++|||+||+.|+........... ......+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (283)
T cd05080 157 VPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIEL 236 (283)
T ss_pred cCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhh
Confidence 6432211 1122356679999999888899999999999999999999999864332111000 00011111
Q ss_pred cCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 395 LDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
.+.....+.... ....+.+++..||+.+|++|||++++++.|+.+
T Consensus 237 ~~~~~~~~~~~~---~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~ 281 (283)
T cd05080 237 LERGMRLPCPKN---CPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281 (283)
T ss_pred hhcCCCCCCCCC---CCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence 111111111111 112477899999999999999999999999875
No 129
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.5e-40 Score=321.88 Aligned_cols=241 Identities=24% Similarity=0.327 Sum_probs=189.1
Q ss_pred ceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHH-HHhhccCCceeeEEEEEeeCCEEEEEEEeccC
Q 012219 176 YCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEAR-LLSQIRHRNIVKLYGFCLHRKCMFLIYEYMEM 253 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 253 (468)
+.||+|+||.||+|.. .+|+.+|+|++...........+.+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 3599999999999964 578999999997654333233445556655 46779999999999999999999999999999
Q ss_pred CChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCce
Q 012219 254 GSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRT 333 (468)
Q Consensus 254 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 333 (468)
|+|..++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~al~~lH---~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~ 154 (325)
T cd05604 81 GELFFHLQRER---SFPEPRARFYAAEIASALGYLH---SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTT 154 (325)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcc
Confidence 99998887543 3889999999999999999999 78999999999999999999999999999875433333344
Q ss_pred eccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHH
Q 012219 334 LLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIIL 413 (468)
Q Consensus 334 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (468)
...|++.|+|||++.+..++.++|||||||++|||++|+.||......... ..... ....+.+... ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~-~~~~~----~~~~~~~~~~-------~~ 222 (325)
T cd05604 155 TFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMY-DNILH----KPLVLRPGAS-------LT 222 (325)
T ss_pred cccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHH-HHHHc----CCccCCCCCC-------HH
Confidence 567999999999999999999999999999999999999999754321110 10000 0011111111 12
Q ss_pred HHHHHHhcccCCCCCCCCHHH
Q 012219 414 VSTVAFSCLRSQPKSRPTMQL 434 (468)
Q Consensus 414 l~~l~~~cl~~dP~~RPs~~~ 434 (468)
+.+++.+|++.+|.+||++.+
T Consensus 223 ~~~ll~~ll~~~p~~R~~~~~ 243 (325)
T cd05604 223 AWSILEELLEKDRQRRLGAKE 243 (325)
T ss_pred HHHHHHHHhccCHHhcCCCCC
Confidence 567899999999999998853
No 130
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=5.4e-40 Score=313.96 Aligned_cols=260 Identities=27% Similarity=0.413 Sum_probs=200.0
Q ss_pred hCccccceeeeeCCceEEEEEcCC-C--CEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPS-G--KVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCMF 245 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~-~--~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 245 (468)
++|++.+.||+|+||.||+|...+ + ..+++|.++..... ...+.|.+|++++.++ +||||+++++++......+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~ 79 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASE--NDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLY 79 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCH--HHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcce
Confidence 468889999999999999997643 3 34788888743322 2346788999999999 7999999999999988999
Q ss_pred EEEEeccCCChhhhhhcCc-------------ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC
Q 012219 246 LIYEYMEMGSLFCVLRTDE-------------EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSEL 312 (468)
Q Consensus 246 lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~ 312 (468)
+++||+++|+|.+++.... ....+++..++.++.|++.||+||| +.+++||||||+||+++.++
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nill~~~~ 156 (297)
T cd05089 80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS---EKQFIHRDLAARNVLVGENL 156 (297)
T ss_pred EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCcCCcceEEECCCC
Confidence 9999999999999996532 1124788999999999999999999 78999999999999999999
Q ss_pred CeEEeeccccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhccccc
Q 012219 313 EAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKL 391 (468)
Q Consensus 313 ~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~ 391 (468)
.+||+|||++...... ........+..|+|||+.....++.++|||||||++|||++ |+.||........... .
T Consensus 157 ~~kl~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~----~ 231 (297)
T cd05089 157 ASKIADFGLSRGEEVY-VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEK----L 231 (297)
T ss_pred eEEECCcCCCccccce-eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH----H
Confidence 9999999998643211 11111223457999999988889999999999999999998 9999875432211110 1
Q ss_pred ccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCCC
Q 012219 392 IDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKAP 446 (468)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~~ 446 (468)
.....+....... ..+.+++.+||+.+|.+||+++++++.|..+....
T Consensus 232 ~~~~~~~~~~~~~-------~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 232 PQGYRMEKPRNCD-------DEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred hcCCCCCCCCCCC-------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 1101111111111 12678999999999999999999998887776543
No 131
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-40 Score=323.39 Aligned_cols=246 Identities=24% Similarity=0.362 Sum_probs=203.7
Q ss_pred HhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CCceeeEEEEEeeCCEEE
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIR-HRNIVKLYGFCLHRKCMF 245 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~ 245 (468)
..++|.+..+||+|.||+|+.+.. .+++.+|||++++...-....++..+.|.+++...+ ||.++.++..++..++.+
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 346899999999999999999975 468899999999887766667788889999988875 999999999999999999
Q ss_pred EEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccc
Q 012219 246 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLL 325 (468)
Q Consensus 246 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 325 (468)
.||||+.||++..+.+. ..+++..+.-++..|+.||.||| .++||+||||-+|||+|.+|.+||+|||+++..
T Consensus 446 fvmey~~Ggdm~~~~~~----~~F~e~rarfyaAev~l~L~fLH---~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~ 518 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHIHT----DVFSEPRARFYAAEVVLGLQFLH---ENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEG 518 (694)
T ss_pred EEEEecCCCcEEEEEec----ccccHHHHHHHHHHHHHHHHHHH---hcCceeeecchhheEEcccCcEEeccccccccc
Confidence 99999999994443332 33899999999999999999999 789999999999999999999999999999876
Q ss_pred cCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccch
Q 012219 326 NFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQ 405 (468)
Q Consensus 326 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (468)
-......+.++||+.|||||++.+..|+.++|.|||||+||||+.|..||...+.+.. .+. .. .-++.++...+
T Consensus 519 m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~-Fds-I~---~d~~~yP~~ls- 592 (694)
T KOG0694|consen 519 MGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEV-FDS-IV---NDEVRYPRFLS- 592 (694)
T ss_pred CCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHH-HHH-Hh---cCCCCCCCccc-
Confidence 5556677789999999999999999999999999999999999999999985432211 111 11 11222222221
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCH
Q 012219 406 KIRQDIILVSTVAFSCLRSQPKSRPTM 432 (468)
Q Consensus 406 ~~~~~~~~l~~l~~~cl~~dP~~RPs~ 432 (468)
.+ ...|+.+++.++|++|.-+
T Consensus 593 ---~e---a~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 593 ---KE---AIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred ---HH---HHHHHHHHhccCcccccCC
Confidence 22 4568889999999999866
No 132
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2.5e-40 Score=320.33 Aligned_cols=242 Identities=23% Similarity=0.322 Sum_probs=187.9
Q ss_pred ceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHH-HHHhhccCCceeeEEEEEeeCCEEEEEEEeccC
Q 012219 176 YCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEA-RLLSQIRHRNIVKLYGFCLHRKCMFLIYEYMEM 253 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~-~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 253 (468)
+.||+|+||.||+|+.. +++.||+|++.............+..|. .+++.++|+||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 36999999999999754 6788999999764432222233444444 456788999999999999999999999999999
Q ss_pred CChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCce
Q 012219 254 GSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRT 333 (468)
Q Consensus 254 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 333 (468)
|+|.+++.... .+.+.....++.||+.||.||| +.+|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~~~~~~---~~~~~~~~~~~~qi~~~L~~lH---~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~ 154 (325)
T cd05602 81 GELFYHLQRER---CFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTS 154 (325)
T ss_pred CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcc
Confidence 99999987543 3778888889999999999999 78999999999999999999999999999976433333344
Q ss_pred eccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHH
Q 012219 334 LLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIIL 413 (468)
Q Consensus 334 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (468)
...|++.|+|||++.+..++.++|||||||++|||++|+.||......... .. .... .....+.... .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~-~~---i~~~-~~~~~~~~~~-------~ 222 (325)
T cd05602 155 TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMY-DN---ILNK-PLQLKPNITN-------S 222 (325)
T ss_pred cccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHH-HH---HHhC-CcCCCCCCCH-------H
Confidence 567999999999999999999999999999999999999999754322110 00 0000 0111111111 2
Q ss_pred HHHHHHhcccCCCCCCCCHHHH
Q 012219 414 VSTVAFSCLRSQPKSRPTMQLV 435 (468)
Q Consensus 414 l~~l~~~cl~~dP~~RPs~~~v 435 (468)
+.+++.+|++.||.+||++.+.
T Consensus 223 ~~~li~~~l~~~p~~R~~~~~~ 244 (325)
T cd05602 223 ARHLLEGLLQKDRTKRLGAKDD 244 (325)
T ss_pred HHHHHHHHcccCHHHCCCCCCC
Confidence 5678899999999999998643
No 133
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=8.5e-40 Score=306.45 Aligned_cols=252 Identities=27% Similarity=0.466 Sum_probs=200.0
Q ss_pred hCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
++|.+.+.||+|+||.||+|...++..+|+|.+...... .+.|.+|+.++++++|+|++++++++.. ...+++||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~----~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e 80 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMS----PESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVTE 80 (260)
T ss_pred HHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCC----HHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEEE
Confidence 568889999999999999999888889999999765432 3568899999999999999999998854 45789999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|+++++|.+++.... ...+++..++.++.|++.||.||| +.+++||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05070 81 YMSKGSLLDFLKDGE-GRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNE 156 (260)
T ss_pred ecCCCcHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEEeCCceEEeCCceeeeeccCcc
Confidence 999999999987543 234789999999999999999999 7799999999999999999999999999997654322
Q ss_pred CC-ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 330 SN-RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 330 ~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
.. .....++..|+|||+..+..++.++||||||+++|||++ |+.||........ ... +......+...
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~-~~~-------~~~~~~~~~~~-- 226 (260)
T cd05070 157 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREV-LEQ-------VERGYRMPCPQ-- 226 (260)
T ss_pred cccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHH-HHH-------HHcCCCCCCCC--
Confidence 11 112234567999999988889999999999999999999 8999865432111 110 11111111111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHh
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIA 441 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~ 441 (468)
.....+.+++.+|+..+|++|||+.++.+.|+.
T Consensus 227 -~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 227 -DCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred -cCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 111237789999999999999999999988864
No 134
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=8e-40 Score=306.12 Aligned_cols=246 Identities=24% Similarity=0.347 Sum_probs=193.1
Q ss_pred eeeeeCCceEEEEEc---CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEeccC
Q 012219 177 CIGTGGYGSVYRARL---PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYMEM 253 (468)
Q Consensus 177 ~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 253 (468)
.||+|+||.||+|.+ .++..+|+|+++..... ....+.+.+|+.+++.++|+||+++++++.. +..++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~ 79 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNND-PALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAEL 79 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCc-HHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCC
Confidence 589999999999964 46788999998754432 2345678899999999999999999999864 457899999999
Q ss_pred CChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCc-
Q 012219 254 GSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNR- 332 (468)
Q Consensus 254 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~- 332 (468)
|+|.+++.... .+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||+++.........
T Consensus 80 ~~L~~~l~~~~---~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 153 (257)
T cd05116 80 GPLNKFLQKNK---HVTEKNITELVHQVSMGMKYLE---ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK 153 (257)
T ss_pred CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeee
Confidence 99999987543 3889999999999999999999 7899999999999999999999999999998764332211
Q ss_pred --eeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchhHHH
Q 012219 333 --TLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQ 409 (468)
Q Consensus 333 --~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (468)
....++..|+|||.+....++.++|||||||++|||++ |+.||........... ......+..+...+
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~----i~~~~~~~~~~~~~----- 224 (257)
T cd05116 154 AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQM----IESGERMECPQRCP----- 224 (257)
T ss_pred ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH----HHCCCCCCCCCCCC-----
Confidence 11234578999999988889999999999999999998 9999975432211110 00000111111111
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHh
Q 012219 410 DIILVSTVAFSCLRSQPKSRPTMQLVSNEFIA 441 (468)
Q Consensus 410 ~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~ 441 (468)
..+.+++.+||+.||++||++++|...|.+
T Consensus 225 --~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 225 --PEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred --HHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 126679999999999999999999999874
No 135
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=3e-40 Score=319.17 Aligned_cols=240 Identities=22% Similarity=0.324 Sum_probs=187.7
Q ss_pred ceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHH-HHhhccCCceeeEEEEEeeCCEEEEEEEeccC
Q 012219 176 YCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEAR-LLSQIRHRNIVKLYGFCLHRKCMFLIYEYMEM 253 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 253 (468)
+.||+|+||.||+|+. .+++.||+|++.............+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 3699999999999976 468899999997654333333445555554 67889999999999999999999999999999
Q ss_pred CChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCce
Q 012219 254 GSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRT 333 (468)
Q Consensus 254 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 333 (468)
|+|...+.... .+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||+++..........
T Consensus 81 ~~L~~~l~~~~---~~~~~~~~~~~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 154 (321)
T cd05603 81 GELFFHLQRER---CFLEPRARFYAAEVASAIGYLH---SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTS 154 (321)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccc
Confidence 99998886533 3788888999999999999999 78999999999999999999999999999875432333334
Q ss_pred eccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHH
Q 012219 334 LLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIIL 413 (468)
Q Consensus 334 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (468)
...|++.|+|||++.+..++.++|||||||++|||++|+.||......... .. ... -...+..... ..
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~-~~---i~~-~~~~~~~~~~-------~~ 222 (321)
T cd05603 155 TFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMY-DN---ILH-KPLQLPGGKT-------VA 222 (321)
T ss_pred cccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHH-HH---Hhc-CCCCCCCCCC-------HH
Confidence 457899999999999889999999999999999999999999754321110 00 000 0011111111 12
Q ss_pred HHHHHHhcccCCCCCCCCHH
Q 012219 414 VSTVAFSCLRSQPKSRPTMQ 433 (468)
Q Consensus 414 l~~l~~~cl~~dP~~RPs~~ 433 (468)
+.+++.+|++.||.+||++.
T Consensus 223 ~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 223 ACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred HHHHHHHHccCCHhhcCCCC
Confidence 66789999999999999863
No 136
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=9.4e-40 Score=312.01 Aligned_cols=259 Identities=24% Similarity=0.346 Sum_probs=197.9
Q ss_pred hCccccceeeeeCCceEEEEEcCC---------------CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPS---------------GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKL 234 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 234 (468)
++|.+.+.||+|+||.||+++..+ ...||+|.++..... .....|.+|++++++++|+|++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~ei~~l~~l~h~~i~~~ 82 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTK--TARNDFLKEIKIMSRLKNPNIIRL 82 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCH--HHHHHHHHHHHHHHhCCCCCcCeE
Confidence 578899999999999999986532 235899998765332 234578899999999999999999
Q ss_pred EEEEeeCCEEEEEEEeccCCChhhhhhcCcc---------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCc
Q 012219 235 YGFCLHRKCMFLIYEYMEMGSLFCVLRTDEE---------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNN 305 (468)
Q Consensus 235 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~---------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~N 305 (468)
++++...+..++||||+++++|.+++..... ...+++..++.++.|++.||+||| +.+++||||||+|
T Consensus 83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH---~~~i~H~dlkp~N 159 (295)
T cd05097 83 LGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA---SLNFVHRDLATRN 159 (295)
T ss_pred EEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH---hcCeeccccChhh
Confidence 9999999999999999999999999864321 123688999999999999999999 7899999999999
Q ss_pred eeeCCCCCeEEeeccccccccCCCCC--ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh--CCCCCCccccc
Q 012219 306 VLLNSELEAFVADFGVARLLNFDSSN--RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM--GKHPGELLSSS 381 (468)
Q Consensus 306 Ill~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t--g~~p~~~~~~~ 381 (468)
|+++.++.+||+|||++......... .....++..|+|||+.....++.++|||||||++|||++ |..||......
T Consensus 160 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~ 239 (295)
T cd05097 160 CLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE 239 (295)
T ss_pred EEEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH
Confidence 99999999999999999765322111 112234678999999988889999999999999999998 66777654322
Q ss_pred chhhhccc---ccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 012219 382 SWSLDKNI---KLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFI 440 (468)
Q Consensus 382 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~ 440 (468)
........ ......-....+..+ ..+.+++.+||+.||++|||+++|.+.|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 240 QVIENTGEFFRNQGRQIYLSQTPLCP-------SPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHHHHHHhhhhccccccCCCCCCCC-------HHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 11100000 000000000011111 23778999999999999999999998885
No 137
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=6.6e-40 Score=312.78 Aligned_cols=258 Identities=24% Similarity=0.375 Sum_probs=202.8
Q ss_pred hhCccccceeeeeCCceEEEEEcC------CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeC
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHR 241 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 241 (468)
.++|++.+.||+|+||.||++... +...+|+|.+...... .....+.+|++++.++ +|+||+++++++...
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~--~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATE--KDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCH--HHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 457888999999999999999753 3467999998765433 2346688999999999 799999999999999
Q ss_pred CEEEEEEEeccCCChhhhhhcC-------------cccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee
Q 012219 242 KCMFLIYEYMEMGSLFCVLRTD-------------EEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLL 308 (468)
Q Consensus 242 ~~~~lv~e~~~~gsL~~~l~~~-------------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll 308 (468)
+..+++|||+++|+|.++++.. .....+++..++.++.|++.||.||| +.+|+||||||+||++
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~Nil~ 165 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA---SKKCIHRDLAARNVLV 165 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCccccccceeeEEE
Confidence 9999999999999999998642 22345889999999999999999999 7899999999999999
Q ss_pred CCCCCeEEeeccccccccCCCCC--ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhh
Q 012219 309 NSELEAFVADFGVARLLNFDSSN--RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSL 385 (468)
Q Consensus 309 ~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~ 385 (468)
+.++.+||+|||+++.+...... .....++..|+|||+..+..++.++|||||||++|||++ |..||..........
T Consensus 166 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~ 245 (293)
T cd05053 166 TEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFK 245 (293)
T ss_pred cCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHH
Confidence 99999999999999876432211 111234567999999988899999999999999999998 999986543221110
Q ss_pred hcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 386 DKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
. ......+...... ...+.+++.+|+..+|++|||+.++++.|..+
T Consensus 246 ~----~~~~~~~~~~~~~-------~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~ 291 (293)
T cd05053 246 L----LKEGYRMEKPQNC-------TQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM 291 (293)
T ss_pred H----HHcCCcCCCCCCC-------CHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence 0 0000001111111 12377899999999999999999999999875
No 138
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.1e-39 Score=305.96 Aligned_cols=253 Identities=26% Similarity=0.417 Sum_probs=200.3
Q ss_pred hhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
.++|.+.+.||+|+||.||+|...++..||+|.+...... .+.|.+|++++++++|+||+++++++.. ...++||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~----~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~ 79 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMS----PEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 79 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCccC----HHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEE
Confidence 3568999999999999999998877778999999754432 3568899999999999999999998754 4578999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++|+|.+++.... ...+++..++.++.|++.||+||| +.+++||||||+||++++++.++|+|||.++.....
T Consensus 80 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~ 155 (262)
T cd05071 80 EYMSKGSLLDFLKGEM-GKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN 155 (262)
T ss_pred EcCCCCcHHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHH---HCCccccccCcccEEEcCCCcEEeccCCceeecccc
Confidence 9999999999997543 234789999999999999999999 789999999999999999999999999999766432
Q ss_pred CCC-ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchh
Q 012219 329 SSN-RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQK 406 (468)
Q Consensus 329 ~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (468)
... .....++..|+|||+.....++.++||||||+++|||+| |+.||......... .. ...........
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~-~~---~~~~~~~~~~~----- 226 (262)
T cd05071 156 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-DQ---VERGYRMPCPP----- 226 (262)
T ss_pred ccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHH-HH---HhcCCCCCCcc-----
Confidence 221 112345678999999988899999999999999999999 88898654321111 00 00000011111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHh
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIA 441 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~ 441 (468)
.....+.+++.+|++.+|++||++.++.+.|+.
T Consensus 227 --~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~ 259 (262)
T cd05071 227 --ECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 259 (262)
T ss_pred --ccCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence 112237789999999999999999999999875
No 139
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=4.7e-40 Score=322.88 Aligned_cols=254 Identities=22% Similarity=0.351 Sum_probs=195.9
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|+..+.||+|+||.||++.. .+++.||+|++.............+.+|+.++..++|+||+++++.+.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 3688899999999999999975 468999999997654433345567889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++|+|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.++|+|||+++.....
T Consensus 81 E~~~gg~L~~~l~~~~---~l~~~~~~~~~~qi~~~L~~lH---~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~ 154 (360)
T cd05627 81 EFLPGGDMMTLLMKKD---TLSEEATQFYIAETVLAIDAIH---QLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKA 154 (360)
T ss_pred eCCCCccHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEccCCCHHHEEECCCCCEEEeeccCCcccccc
Confidence 9999999999987543 3889999999999999999999 889999999999999999999999999998754211
Q ss_pred CC-----------------------------------CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCC
Q 012219 329 SS-----------------------------------NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKH 373 (468)
Q Consensus 329 ~~-----------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~ 373 (468)
.. ......||+.|+|||++.+..++.++|||||||++|||+||+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~ 234 (360)
T cd05627 155 HRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYP 234 (360)
T ss_pred cccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCC
Confidence 00 0113468999999999999999999999999999999999999
Q ss_pred CCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCC---HHHHHHH
Q 012219 374 PGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPT---MQLVSNE 438 (468)
Q Consensus 374 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs---~~~v~~~ 438 (468)
||........... .......+ ...... ...+. +.+++.+|+ .||++|++ +++++++
T Consensus 235 Pf~~~~~~~~~~~-i~~~~~~~--~~p~~~--~~s~~---~~~li~~l~-~~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 235 PFCSETPQETYRK-VMNWKETL--VFPPEV--PISEK---AKDLILRFC-TDSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCCCCCHHHHHHH-HHcCCCce--ecCCCC--CCCHH---HHHHHHHhc-cChhhcCCCCCHHHHhcC
Confidence 9975432211110 00000000 011110 01111 445666666 49999985 6777754
No 140
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-40 Score=303.71 Aligned_cols=274 Identities=26% Similarity=0.353 Sum_probs=203.2
Q ss_pred hhCccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee-----CC
Q 012219 169 TEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH-----RK 242 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-----~~ 242 (468)
...|...+.||+|+||.|+++. ..+|+.||+|++....... ...+.-.+|+++++.++|+||+.+.+.+.. -+
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~-~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQ-IDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhch-HHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 4556667889999999999996 4578999999998543332 335667799999999999999999998865 34
Q ss_pred EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccc
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVA 322 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~ 322 (468)
..|+|+|+|+ .+|...++.+.. ++......++.|+++||+|+| +.+|+||||||+|++++.+...||+|||+|
T Consensus 100 DvYiV~elMe-tDL~~iik~~~~---L~d~H~q~f~YQiLrgLKyiH---SAnViHRDLKPsNll~n~~c~lKI~DFGLA 172 (359)
T KOG0660|consen 100 DVYLVFELME-TDLHQIIKSQQD---LTDDHAQYFLYQILRGLKYIH---SANVIHRDLKPSNLLLNADCDLKICDFGLA 172 (359)
T ss_pred eeEEehhHHh-hHHHHHHHcCcc---ccHHHHHHHHHHHHHhcchhh---cccccccccchhheeeccCCCEEeccccce
Confidence 5899999994 589999887554 888899999999999999999 899999999999999999999999999999
Q ss_pred ccccCC--CCCceecccccccccccccc-CCCCCccchhhHHHHHHHHHHhCCCCCCcccccch--------------hh
Q 012219 323 RLLNFD--SSNRTLLAGTYGYIAPELAY-TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSW--------------SL 385 (468)
Q Consensus 323 ~~~~~~--~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~--------------~~ 385 (468)
+..... ....+..+-|.+|.|||++. ...|+.+.||||.|||+.||++|++-|.+...... ..
T Consensus 173 R~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l 252 (359)
T KOG0660|consen 173 RYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDL 252 (359)
T ss_pred eeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHH
Confidence 987532 33345567899999999765 56899999999999999999999998865432110 00
Q ss_pred h--cccccccc---cCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH-HHHhcCCCCCCCC
Q 012219 386 D--KNIKLIDL---LDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN-EFIARNKAPMQKP 450 (468)
Q Consensus 386 ~--~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~-~l~~~~~~~~~~~ 450 (468)
. ........ +.+....++...+...-..-.+++.+||..||.+|+|++|.++ .....-..+..+|
T Consensus 253 ~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP 323 (359)
T KOG0660|consen 253 QKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEP 323 (359)
T ss_pred HHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCC
Confidence 0 00000011 1111111111112122223567899999999999999988774 4444443333333
No 141
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=8.2e-40 Score=323.24 Aligned_cols=261 Identities=22% Similarity=0.337 Sum_probs=203.2
Q ss_pred HHhhCccccceeeeeCCceEEEEEcC------CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CCceeeEEEEEe
Q 012219 167 EATEDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHRSETEELASLESFGNEARLLSQIR-HRNIVKLYGFCL 239 (468)
Q Consensus 167 ~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~ 239 (468)
...++|.+.+.||+|+||.||+|++. .++.||+|+++...... ..+.+.+|++++.++. ||||++++++|.
T Consensus 34 ~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~--~~~~~~~E~~~l~~l~~H~niv~~~~~~~ 111 (401)
T cd05107 34 MPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSS--EKQALMSELKIMSHLGPHLNIVNLLGACT 111 (401)
T ss_pred ecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChh--HHHHHHHHHHHHHhcCCCCCeEEEEEEEc
Confidence 34467888899999999999999753 34689999998654332 2357889999999997 999999999999
Q ss_pred eCCEEEEEEEeccCCChhhhhhcCcc------------------------------------------------------
Q 012219 240 HRKCMFLIYEYMEMGSLFCVLRTDEE------------------------------------------------------ 265 (468)
Q Consensus 240 ~~~~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------------ 265 (468)
..+..++|+||+++|+|.++++....
T Consensus 112 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (401)
T cd05107 112 KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP 191 (401)
T ss_pred cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence 99999999999999999999865321
Q ss_pred -----------------------------------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCC
Q 012219 266 -----------------------------------------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSN 304 (468)
Q Consensus 266 -----------------------------------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~ 304 (468)
...+++...+.++.|++.||.||| +.+++||||||+
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrdlkp~ 268 (401)
T cd05107 192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLA---SKNCVHRDLAAR 268 (401)
T ss_pred hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh---cCCcCcccCCcc
Confidence 123677888999999999999999 789999999999
Q ss_pred ceeeCCCCCeEEeeccccccccCCCC--CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCccccc
Q 012219 305 NVLLNSELEAFVADFGVARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSS 381 (468)
Q Consensus 305 NIll~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~ 381 (468)
||++++++.+||+|||+++....... ......++..|+|||.+....++.++|||||||++|||++ |..||......
T Consensus 269 NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~ 348 (401)
T cd05107 269 NVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN 348 (401)
T ss_pred eEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch
Confidence 99999999999999999976532211 1122346788999999998889999999999999999998 89998654322
Q ss_pred chhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 382 SWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
....... ..-..+....... ..+.+++.+||+.+|++||+++++++.|++.
T Consensus 349 ~~~~~~~---~~~~~~~~p~~~~-------~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 349 EQFYNAI---KRGYRMAKPAHAS-------DEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred HHHHHHH---HcCCCCCCCCCCC-------HHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 1111100 0000111111111 2377899999999999999999999999864
No 142
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.3e-39 Score=308.53 Aligned_cols=249 Identities=24% Similarity=0.319 Sum_probs=196.0
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
+|.+.+.||+|+||.||+|.. .+++.||+|.+...... ...+.|.+|++++.+++||||+++++++...+..++|+|
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 79 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITV--ELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTE 79 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCCh--HHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEe
Confidence 577888999999999999964 57899999998755322 234678899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|+++++|..+. .+++..+..++.|++.||.||| +.+|+|+||||+||+++.++.++|+|||++......
T Consensus 80 ~~~~~~l~~~~-------~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~- 148 (279)
T cd06619 80 FMDGGSLDVYR-------KIPEHVLGRIAVAVVKGLTYLW---SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS- 148 (279)
T ss_pred cCCCCChHHhh-------cCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc-
Confidence 99999997553 2678888999999999999999 789999999999999999999999999999765322
Q ss_pred CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhc---ccccccccCCCCCCccchh
Q 012219 330 SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDK---NIKLIDLLDPRLSPPVDQK 406 (468)
Q Consensus 330 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 406 (468)
......++..|+|||++.+..++.++||||||+++|+|++|+.||............ .........+......
T Consensus 149 -~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 224 (279)
T cd06619 149 -IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQ--- 224 (279)
T ss_pred -cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCc---
Confidence 233356899999999999889999999999999999999999998653321110000 0000000111111100
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
....+.+++.+|++.+|++||++++++++-
T Consensus 225 ---~~~~~~~li~~~l~~~P~~Rp~~~eil~~~ 254 (279)
T cd06619 225 ---FSEKFVHFITQCMRKQPKERPAPENLMDHP 254 (279)
T ss_pred ---CCHHHHHHHHHHhhCChhhCCCHHHHhcCc
Confidence 111267899999999999999999998653
No 143
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.2e-39 Score=308.65 Aligned_cols=259 Identities=24% Similarity=0.406 Sum_probs=201.4
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCC----EEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGK----VVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKC 243 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 243 (468)
.++|++.+.||+|+||.||+|.+ .++. .||+|++...... ...+.+.+|+.++..++|+||+++++++... .
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~ 82 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSP--KANKEILDEAYVMAGVGSPYVCRLLGICLTS-T 82 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCH--HHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-C
Confidence 35788899999999999999974 3444 4899998755433 2346788999999999999999999999764 4
Q ss_pred EEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccc
Q 012219 244 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVAR 323 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~ 323 (468)
.++++||+++|+|.++++... ..+++..++.++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++
T Consensus 83 ~~l~~~~~~~g~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~lH---~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~ 157 (279)
T cd05109 83 VQLVTQLMPYGCLLDYVRENK--DRIGSQDLLNWCVQIAKGMSYLE---EVRLVHRDLAARNVLVKSPNHVKITDFGLAR 157 (279)
T ss_pred cEEEEEcCCCCCHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceEEEcCCCcEEECCCCcee
Confidence 678999999999999997643 23889999999999999999999 7899999999999999999999999999998
Q ss_pred cccCCCCCc--eeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCC
Q 012219 324 LLNFDSSNR--TLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLS 400 (468)
Q Consensus 324 ~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (468)
......... ....++..|+|||...+..++.++|||||||++|||++ |..||+........ .. ......+...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~--~~--~~~~~~~~~~ 233 (279)
T cd05109 158 LLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIP--DL--LEKGERLPQP 233 (279)
T ss_pred ecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH--HH--HHCCCcCCCC
Confidence 764322211 11234668999999988899999999999999999998 99998754321110 00 0000000111
Q ss_pred CccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCCC
Q 012219 401 PPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKAP 446 (468)
Q Consensus 401 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~~ 446 (468)
... ...+.+++.+||+.||++||++.++++.|.+....+
T Consensus 234 ~~~-------~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 234 PIC-------TIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred ccC-------CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 111 123677999999999999999999999998876554
No 144
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.8e-39 Score=306.30 Aligned_cols=255 Identities=25% Similarity=0.383 Sum_probs=195.1
Q ss_pred ccccceeeeeCCceEEEEEcCCC-C--EEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC------C
Q 012219 172 FHIKYCIGTGGYGSVYRARLPSG-K--VVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR------K 242 (468)
Q Consensus 172 ~~~~~~lg~G~~g~Vy~~~~~~~-~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 242 (468)
|.+.+.||+|+||.||+|...+. . .+|+|.++..... ....+.|.+|+++++.++|+||+++++++... .
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 79 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICT-RSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYP 79 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCC
Confidence 34678899999999999986543 2 6899988764322 23356788999999999999999999988542 2
Q ss_pred EEEEEEEeccCCChhhhhhcC---cccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeec
Q 012219 243 CMFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADF 319 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~---~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 319 (468)
..++++||+++|+|.+++... .....+++.....++.|++.||+||| +.+|+||||||+||+++.++.+||+||
T Consensus 80 ~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Df 156 (272)
T cd05075 80 SPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS---SKSFIHRDLAARNCMLNENMNVCVADF 156 (272)
T ss_pred CcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhheEEcCCCCEEECCC
Confidence 468999999999999887432 12334889999999999999999999 789999999999999999999999999
Q ss_pred cccccccCCCCC--ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccC
Q 012219 320 GVARLLNFDSSN--RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLD 396 (468)
Q Consensus 320 g~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~ 396 (468)
|+++........ .....+++.|+|||+..+..++.++||||||+++|||++ |+.||......... ... .... .
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~-~~~-~~~~--~ 232 (272)
T cd05075 157 GLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIY-DYL-RQGN--R 232 (272)
T ss_pred CcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHH-HHH-HcCC--C
Confidence 999876432211 122345678999999999999999999999999999999 88998654321110 000 0000 0
Q ss_pred CCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHh
Q 012219 397 PRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIA 441 (468)
Q Consensus 397 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~ 441 (468)
........ ..+.+++.+||+.||++|||++++++.|.+
T Consensus 233 ~~~~~~~~-------~~~~~li~~~l~~~p~~Rps~~~l~~~l~~ 270 (272)
T cd05075 233 LKQPPDCL-------DGLYSLMSSCWLLNPKDRPSFETLRCELEK 270 (272)
T ss_pred CCCCCCCC-------HHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 01111111 126789999999999999999999999876
No 145
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=2.4e-39 Score=307.64 Aligned_cols=254 Identities=20% Similarity=0.275 Sum_probs=198.5
Q ss_pred ccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEe
Q 012219 172 FHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEY 250 (468)
Q Consensus 172 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (468)
|+..+.||+|+||+||+|.. .+++.+|+|.+.............+.+|++++++++|+|++++.+++..++..+++|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 56678899999999999965 57899999999765443333345678899999999999999999999999999999999
Q ss_pred ccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCC
Q 012219 251 MEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSS 330 (468)
Q Consensus 251 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 330 (468)
+++++|.+++.... ...+++..+..++.|++.||.||| +.+|+||||||+||++++++.++|+|||++...... .
T Consensus 82 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH---~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~-~ 156 (285)
T cd05632 82 MNGGDLKFHIYNMG-NPGFEEERALFYAAEILCGLEDLH---RENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG-E 156 (285)
T ss_pred ccCccHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEECCCCCEEEecCCcceecCCC-C
Confidence 99999998886533 234899999999999999999999 789999999999999999999999999998765322 2
Q ss_pred CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHH
Q 012219 331 NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQD 410 (468)
Q Consensus 331 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (468)
......|+..|+|||++.+..++.++|||||||++|||++|+.||................... .........
T Consensus 157 ~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------ 229 (285)
T cd05632 157 SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLET-EEVYSAKFS------ 229 (285)
T ss_pred cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhcc-ccccCccCC------
Confidence 2233468999999999988899999999999999999999999997543211111000000000 111111111
Q ss_pred HHHHHHHHHhcccCCCCCCCC-----HHHHHHH
Q 012219 411 IILVSTVAFSCLRSQPKSRPT-----MQLVSNE 438 (468)
Q Consensus 411 ~~~l~~l~~~cl~~dP~~RPs-----~~~v~~~ 438 (468)
..+.+++.+|++.||++||+ +.+++++
T Consensus 230 -~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 230 -EEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred -HHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 12567899999999999999 6666654
No 146
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=2.5e-39 Score=303.68 Aligned_cols=253 Identities=24% Similarity=0.343 Sum_probs=200.8
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcch--hhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSET--EELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (468)
++|.+.+.||+|++|.||++.. .+++.+|+|.+..... ......+.+.+|++++++++||||+++++++......++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4688899999999999999975 5689999999875432 222345678899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccccc
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLN 326 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 326 (468)
++||+++++|.+++.... .+++.....++.|++.||.||| +.+++||||+|+||+++.++.++|+|||+++...
T Consensus 82 v~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG---ALTETVTRKYTRQILEGVEYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 155 (263)
T ss_pred EEEECCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence 999999999999987543 3788899999999999999999 7899999999999999999999999999987653
Q ss_pred CCCCCc---eeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCcc
Q 012219 327 FDSSNR---TLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPV 403 (468)
Q Consensus 327 ~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (468)
...... ....++..|+|||++.+..++.++||||||+++|||++|+.||............ ......+.+....
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~ 232 (263)
T cd06625 156 TICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKI---ATQPTNPQLPSHV 232 (263)
T ss_pred ccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHH---hccCCCCCCCccC
Confidence 221111 2345778999999999988999999999999999999999998654322111110 0000111111111
Q ss_pred chhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 404 DQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 404 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
. ..+.+++.+||..+|++|||+.+++++
T Consensus 233 ~-------~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 233 S-------PDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred C-------HHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 1 126678999999999999999999865
No 147
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.3e-39 Score=304.35 Aligned_cols=251 Identities=23% Similarity=0.362 Sum_probs=201.0
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
+|++.+.||+|+||.||++.. .+++.+|+|.+...... ...+.+.+|+.+++.++|+|++++++.+...+..++++|
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSS--SAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVME 78 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcch--HHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 477889999999999999975 46889999998654332 235678899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|+++|+|.+++.... ...++....+.++.|++.||.||| +.+++|+||||+||++++++.++++|||.+.......
T Consensus 79 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 154 (255)
T cd08219 79 YCDGGDLMQKIKLQR-GKLFPEDTILQWFVQMCLGVQHIH---EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG 154 (255)
T ss_pred eCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEECCCCcEEEcccCcceeecccc
Confidence 999999999886532 234788999999999999999999 7899999999999999999999999999998765443
Q ss_pred CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHH
Q 012219 330 SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQ 409 (468)
Q Consensus 330 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (468)
.......++..|+|||++.+..++.++||||||+++|+|++|+.||.............. .... .......
T Consensus 155 ~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~---~~~~-~~~~~~~----- 225 (255)
T cd08219 155 AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQ---GSYK-PLPSHYS----- 225 (255)
T ss_pred cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhc---CCCC-CCCcccC-----
Confidence 333445688999999999988899999999999999999999999975432111111000 0000 1111111
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 410 DIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 410 ~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
..+.+++.+||+.||++||++.+++..
T Consensus 226 --~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 226 --YELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred --HHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 126678999999999999999999864
No 148
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.2e-39 Score=308.78 Aligned_cols=260 Identities=20% Similarity=0.301 Sum_probs=204.8
Q ss_pred hhCccccceeeeeCCceEEEEEcCC-----CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee-CC
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPS-----GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH-RK 242 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~ 242 (468)
.++|.+.+.||+|+||.||+|...+ +..|++|++...... ...+.+.+|+.++++++|+|++++++++.. ..
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~--~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 82 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASE--IQVTLLLQESCLLYGLSHQNILPILHVCIEDGE 82 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCH--HHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 4678899999999999999998655 788999998754332 345678899999999999999999999876 46
Q ss_pred EEEEEEEeccCCChhhhhhcCccc-----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEe
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEEA-----VGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVA 317 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~~-----~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~ 317 (468)
..++++||+++|+|.+++...... ..+++..++.++.|++.||+||| +.+++|+||||+||++++++.+||+
T Consensus 83 ~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kl~ 159 (280)
T cd05043 83 PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH---KRGVIHKDIAARNCVIDEELQVKIT 159 (280)
T ss_pred CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCHhhEEEcCCCcEEEC
Confidence 789999999999999998764322 45899999999999999999999 7899999999999999999999999
Q ss_pred eccccccccCCCCC--ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccc
Q 012219 318 DFGVARLLNFDSSN--RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDL 394 (468)
Q Consensus 318 Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 394 (468)
|||+++.+...... .....++..|+|||++.+..++.++||||||+++||+++ |+.||........... ....
T Consensus 160 d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~----~~~~ 235 (280)
T cd05043 160 DNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAY----LKDG 235 (280)
T ss_pred CCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHH----HHcC
Confidence 99999865322211 112345678999999988889999999999999999999 9999875432211110 0000
Q ss_pred cCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCC
Q 012219 395 LDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNK 444 (468)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~ 444 (468)
.........+ ..+.+++.+||+.||++|||+.++++.|....+
T Consensus 236 ~~~~~~~~~~-------~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 236 YRLAQPINCP-------DELFAVMACCWALDPEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred CCCCCCCcCC-------HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 0111111111 236789999999999999999999999987654
No 149
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=2.2e-39 Score=301.79 Aligned_cols=246 Identities=24% Similarity=0.362 Sum_probs=195.8
Q ss_pred eeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEeccCCCh
Q 012219 177 CIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYMEMGSL 256 (468)
Q Consensus 177 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 256 (468)
.||+|+||.||+|...+++.+|+|.+....... ....|.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 79 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQE--LKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDF 79 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCHH--HHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcH
Confidence 689999999999998889999999987654332 234688999999999999999999999999999999999999999
Q ss_pred hhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCC-ceec
Q 012219 257 FCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSN-RTLL 335 (468)
Q Consensus 257 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~-~~~~ 335 (468)
.+++.... ..+++..++.++.|++.||.|+| +.+++||||||+||+++.++.+||+|||++......... ....
T Consensus 80 ~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 154 (250)
T cd05085 80 LSFLRKKK--DELKTKQLVKFALDAAAGMAYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLK 154 (250)
T ss_pred HHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCC
Confidence 99986543 23789999999999999999999 789999999999999999999999999998754322111 1122
Q ss_pred cccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHH
Q 012219 336 AGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILV 414 (468)
Q Consensus 336 ~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 414 (468)
.++..|+|||+..+..++.++||||||+++||+++ |..||........... ............. ...+
T Consensus 155 ~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~-------~~~~ 223 (250)
T cd05085 155 QIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQ----VEKGYRMSCPQKC-------PDDV 223 (250)
T ss_pred CCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH----HHcCCCCCCCCCC-------CHHH
Confidence 34567999999998889999999999999999998 9999875432211110 0011111111111 1237
Q ss_pred HHHHHhcccCCCCCCCCHHHHHHHHH
Q 012219 415 STVAFSCLRSQPKSRPTMQLVSNEFI 440 (468)
Q Consensus 415 ~~l~~~cl~~dP~~RPs~~~v~~~l~ 440 (468)
.+++.+|++.+|++||++.++...|.
T Consensus 224 ~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 224 YKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHcccCcccCCCHHHHHHHhc
Confidence 78999999999999999999998874
No 150
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.8e-39 Score=310.18 Aligned_cols=250 Identities=24% Similarity=0.351 Sum_probs=200.9
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
.+|...+.||+|+||.||+|.. .+++.|++|.+....... .+.+.+|+.+++.++|+|++++++++......++||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~---~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~ 96 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK---KELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcch---HHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEee
Confidence 5788889999999999999974 578999999987654432 356889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++++|.+++... .+++.++..++.|++.||.||| +.+|+||||||+||+++.++.++|+|||++......
T Consensus 97 e~~~~~~L~~~~~~~----~~~~~~~~~i~~ql~~aL~~LH---~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~ 169 (296)
T cd06654 97 EYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169 (296)
T ss_pred cccCCCCHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEECccccchhcccc
Confidence 999999999998643 3788999999999999999999 789999999999999999999999999998765433
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
........+++.|+|||.+.+..++.++|||||||++|+|++|+.||............. ....+.... ..
T Consensus 170 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~----~~~~~~~~~--~~--- 240 (296)
T cd06654 170 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA----TNGTPELQN--PE--- 240 (296)
T ss_pred ccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHh----cCCCCCCCC--cc---
Confidence 333334568899999999988889999999999999999999999996543211111000 000011110 11
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.....+.+++.+||..+|++||++.+++++
T Consensus 241 ~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 241 KLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred ccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 111236679999999999999999999963
No 151
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=2.7e-39 Score=302.56 Aligned_cols=247 Identities=21% Similarity=0.305 Sum_probs=192.2
Q ss_pred eeeeeCCceEEEEEcC---CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEeccC
Q 012219 177 CIGTGGYGSVYRARLP---SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYMEM 253 (468)
Q Consensus 177 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 253 (468)
.||+|+||.||+|.+. .+..||+|++...... ...+.|.+|+.++++++|+||+++++++.. ...++||||+++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~--~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~ 78 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEK--SVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASG 78 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccCh--HHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCC
Confidence 3899999999999653 3557999998765432 234678999999999999999999999864 467999999999
Q ss_pred CChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCce
Q 012219 254 GSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRT 333 (468)
Q Consensus 254 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 333 (468)
|+|.+++.... ..+++..++.++.|++.||+||| +.+++||||||+||+++.++.+||+|||+++..........
T Consensus 79 ~~L~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 153 (257)
T cd05115 79 GPLNKFLSGKK--DEITVSNVVELMHQVSMGMKYLE---GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYK 153 (257)
T ss_pred CCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH---hcCeeecccchheEEEcCCCcEEeccCCccccccCCcccee
Confidence 99999987533 24899999999999999999999 77999999999999999999999999999976543322111
Q ss_pred ---eccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchhHHH
Q 012219 334 ---LLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQ 409 (468)
Q Consensus 334 ---~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (468)
...++..|+|||+.....++.++|||||||++||+++ |+.||............ .....+.......
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~----- 224 (257)
T cd05115 154 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFI----EQGKRLDCPAECP----- 224 (257)
T ss_pred ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHH----HCCCCCCCCCCCC-----
Confidence 1223568999999988889999999999999999996 99999765432211100 0000111111111
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 410 DIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 410 ~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
..+.+++.+||..+|++||++.+|.+.|++.
T Consensus 225 --~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 225 --PEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred --HHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 2266799999999999999999999998753
No 152
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.6e-39 Score=308.73 Aligned_cols=253 Identities=23% Similarity=0.313 Sum_probs=198.2
Q ss_pred ccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEe
Q 012219 172 FHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEY 250 (468)
Q Consensus 172 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (468)
|+..+.||+|+||.||++.. .+++.+|+|.+...........+.+.+|+.++++++|+|++++++.+...+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 66778899999999999965 46889999998755433323345677899999999999999999999999999999999
Q ss_pred ccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCC
Q 012219 251 MEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSS 330 (468)
Q Consensus 251 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 330 (468)
+++++|.+++..... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.++|+|||++...... .
T Consensus 82 ~~g~~L~~~l~~~~~-~~l~~~~~~~~~~qi~~~l~~lH---~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~-~ 156 (285)
T cd05630 82 MNGGDLKFHIYHMGE-AGFEEGRAVFYAAEICCGLEDLH---QERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG-Q 156 (285)
T ss_pred cCCCcHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCC-c
Confidence 999999998865332 34889999999999999999999 789999999999999999999999999998765322 2
Q ss_pred CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHH
Q 012219 331 NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQD 410 (468)
Q Consensus 331 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (468)
......|+..|+|||++.+..++.++|||||||++|||++|+.||........... .................
T Consensus 157 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------ 229 (285)
T cd05630 157 TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREE-VERLVKEVQEEYSEKFS------ 229 (285)
T ss_pred cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHH-HHhhhhhhhhhcCccCC------
Confidence 22334689999999999988999999999999999999999999975332110000 00000001111111111
Q ss_pred HHHHHHHHHhcccCCCCCCCC-----HHHHHH
Q 012219 411 IILVSTVAFSCLRSQPKSRPT-----MQLVSN 437 (468)
Q Consensus 411 ~~~l~~l~~~cl~~dP~~RPs-----~~~v~~ 437 (468)
..+.+++.+||+.||++||| ++++++
T Consensus 230 -~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 230 -PDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred -HHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 12667899999999999999 788875
No 153
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=2.2e-39 Score=309.61 Aligned_cols=262 Identities=23% Similarity=0.358 Sum_probs=198.3
Q ss_pred hCccccceeeeeCCceEEEEEcC-----------------CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCcee
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-----------------SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIV 232 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv 232 (468)
++|++.+.||+|+||.||++... ++..+|+|++...... ...+.|.+|+++++.++|+||+
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~--~~~~~~~~E~~~l~~l~~~~i~ 82 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANK--NARNDFLKEIKIMSRLKDPNII 82 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCcc
Confidence 56889999999999999998532 2346899998754322 2346788999999999999999
Q ss_pred eEEEEEeeCCEEEEEEEeccCCChhhhhhcCcc--------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCC
Q 012219 233 KLYGFCLHRKCMFLIYEYMEMGSLFCVLRTDEE--------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSN 304 (468)
Q Consensus 233 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~ 304 (468)
++++++...+..+++|||+++|+|.+++..... ...+++...+.++.|++.||+||| +.+++|+||||+
T Consensus 83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dlkp~ 159 (296)
T cd05095 83 RLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS---SLNFVHRDLATR 159 (296)
T ss_pred eEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH---HCCeecccCChh
Confidence 999999999999999999999999999875321 124778899999999999999999 789999999999
Q ss_pred ceeeCCCCCeEEeeccccccccCCCCC--ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh--CCCCCCcccc
Q 012219 305 NVLLNSELEAFVADFGVARLLNFDSSN--RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM--GKHPGELLSS 380 (468)
Q Consensus 305 NIll~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t--g~~p~~~~~~ 380 (468)
||+++.++.++|+|||+++.+...... .....++..|+|||+...+.++.++|||||||++|||++ |..||.....
T Consensus 160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05095 160 NCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSD 239 (296)
T ss_pred eEEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccCh
Confidence 999999999999999999765322211 112234578999999888889999999999999999998 7788865432
Q ss_pred cchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 012219 381 SSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFI 440 (468)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~ 440 (468)
...... ..............+... .....+.+++.+||+.||++||++.+|.+.|+
T Consensus 240 ~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 240 EQVIEN-TGEFFRDQGRQVYLPKPA---LCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HHHHHH-HHHHHhhccccccCCCCC---CCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 211110 000000000000000000 01123778999999999999999999999886
No 154
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=8.9e-40 Score=321.44 Aligned_cols=262 Identities=23% Similarity=0.334 Sum_probs=199.7
Q ss_pred HHHHHHhhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC
Q 012219 163 QDMIEATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR 241 (468)
Q Consensus 163 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 241 (468)
.++....++|++.+.||+|+||.||+++.. +++.+|+|++...........+.+.+|+.+++.++||||+++++.+...
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~ 115 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 115 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence 334445688999999999999999999754 6889999998754433333445678999999999999999999999999
Q ss_pred CEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccc
Q 012219 242 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGV 321 (468)
Q Consensus 242 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 321 (468)
...++||||+++|+|.+++... .++...+..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 116 ~~~~lv~Ey~~gg~L~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDLkp~NIll~~~~~ikL~DfG~ 188 (371)
T cd05622 116 RYLYMVMEYMPGGDLVNLMSNY----DVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGT 188 (371)
T ss_pred CEEEEEEcCCCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHH---HCCEEeCCCCHHHEEECCCCCEEEEeCCc
Confidence 9999999999999999998643 2788888899999999999999 78999999999999999999999999999
Q ss_pred cccccCCCC-CceeccccccccccccccCC----CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccC
Q 012219 322 ARLLNFDSS-NRTLLAGTYGYIAPELAYTM----VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLD 396 (468)
Q Consensus 322 ~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~----~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 396 (468)
++....... ......||+.|+|||++... .++.++|||||||++|||++|+.||........ .. .+....
T Consensus 189 a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~-~~---~i~~~~- 263 (371)
T cd05622 189 CMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT-YS---KIMNHK- 263 (371)
T ss_pred eeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHH-HH---HHHcCC-
Confidence 987643222 22345799999999998654 378899999999999999999999975432111 01 010000
Q ss_pred CCCCCccchhHHHHHHHHHHHHHhcccCCCCC--CCCHHHHHHHH
Q 012219 397 PRLSPPVDQKIRQDIILVSTVAFSCLRSQPKS--RPTMQLVSNEF 439 (468)
Q Consensus 397 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~~v~~~l 439 (468)
..+..+....... .+.+++.+|+..++.+ ||++++++++.
T Consensus 264 ~~~~~~~~~~~s~---~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 264 NSLTFPDDNDISK---EAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred CcccCCCcCCCCH---HHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 0011010111111 2556888899744433 78999988764
No 155
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=2.4e-39 Score=309.38 Aligned_cols=263 Identities=23% Similarity=0.349 Sum_probs=201.3
Q ss_pred hhCccccceeeeeCCceEEEEEcCC-----------------CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCce
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPS-----------------GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNI 231 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni 231 (468)
.++|.+.+.||+|+||.||++...+ +..||+|.+...... ...+.|.+|++++++++|||+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i 81 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD--NAREDFLKEVKILSRLSDPNI 81 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH--HHHHHHHHHHHHHHhcCCCCE
Confidence 3578899999999999999986532 346899998765433 345688899999999999999
Q ss_pred eeEEEEEeeCCEEEEEEEeccCCChhhhhhcCcc--------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 012219 232 VKLYGFCLHRKCMFLIYEYMEMGSLFCVLRTDEE--------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISS 303 (468)
Q Consensus 232 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~ 303 (468)
+++++++......++++||+++++|.+++..... ...+++..++.++.|++.||+||| +.+++|+||||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH---~~~i~H~dlkp 158 (296)
T cd05051 82 ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE---SLNFVHRDLAT 158 (296)
T ss_pred eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH---HcCccccccch
Confidence 9999999998999999999999999999876431 224899999999999999999999 78999999999
Q ss_pred CceeeCCCCCeEEeeccccccccCCCC--CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh--CCCCCCccc
Q 012219 304 NNVLLNSELEAFVADFGVARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM--GKHPGELLS 379 (468)
Q Consensus 304 ~NIll~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t--g~~p~~~~~ 379 (468)
+||+++.++.++|+|||+++....... ......++..|+|||++....++.++|||||||++|||++ |..||....
T Consensus 159 ~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~ 238 (296)
T cd05051 159 RNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT 238 (296)
T ss_pred hceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC
Confidence 999999999999999999876532221 1223345778999999988889999999999999999998 677876443
Q ss_pred ccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 012219 380 SSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFI 440 (468)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~ 440 (468)
.... ...................... ....+.+++.+|++.||++|||+.++.+.|+
T Consensus 239 ~~~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 239 DQQV-IENAGHFFRDDGRQIYLPRPPN---CPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred hHHH-HHHHHhccccccccccCCCccC---CCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 2111 1100000000000000000001 1123778999999999999999999998875
No 156
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=9.4e-40 Score=310.12 Aligned_cols=256 Identities=22% Similarity=0.309 Sum_probs=199.0
Q ss_pred hCccccceeeeeCCceEEEEEcC------CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKC 243 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 243 (468)
.+|.+.+.||+|+||.||+|... .++.||+|++...... ...+.|.+|+.++..++||||+++++++.....
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~ 82 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEG--PLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQP 82 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCH--HHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCc
Confidence 34677888999999999999753 3578999999855432 234568899999999999999999999999999
Q ss_pred EEEEEEeccCCChhhhhhcCc-------------ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC
Q 012219 244 MFLIYEYMEMGSLFCVLRTDE-------------EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS 310 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~ 310 (468)
.++++||+.+++|.+++.... ....+++..++.++.|++.||.||| +.+++||||||+||++++
T Consensus 83 ~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH---~~gi~H~dlkp~Nil~~~ 159 (283)
T cd05091 83 LSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS---SHHVVHKDLATRNVLVFD 159 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH---HcCccccccchhheEecC
Confidence 999999999999999985321 1234788899999999999999999 789999999999999999
Q ss_pred CCCeEEeeccccccccCCCCC--ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhc
Q 012219 311 ELEAFVADFGVARLLNFDSSN--RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDK 387 (468)
Q Consensus 311 ~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~ 387 (468)
++.+||+|||+++........ .....+++.|+|||.+....++.++|||||||++|||++ |..||...........
T Consensus 160 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~- 238 (283)
T cd05091 160 KLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEM- 238 (283)
T ss_pred CCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-
Confidence 999999999998765322211 122345678999999988889999999999999999998 8888865432211110
Q ss_pred ccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHh
Q 012219 388 NIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIA 441 (468)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~ 441 (468)
..+.......... ...+.+++.+||+.+|++||++++++..|+.
T Consensus 239 ---i~~~~~~~~~~~~-------~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 239 ---IRNRQVLPCPDDC-------PAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred ---HHcCCcCCCCCCC-------CHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 0000000111111 1226789999999999999999999998864
No 157
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.5e-39 Score=307.66 Aligned_cols=256 Identities=25% Similarity=0.335 Sum_probs=198.8
Q ss_pred hhCccccceeeeeCCceEEEEEcC------CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK 242 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 242 (468)
+++|.+.+.||+|++|.||+|.+. .+..|++|.+...... .....|.+|+.+++.++|+||+++++++.+..
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSE--QDESDFLMEALIMSKFNHQNIVRLIGVSFERL 82 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence 467889999999999999999764 3567899988654332 23357889999999999999999999999888
Q ss_pred EEEEEEEeccCCChhhhhhcCcc----cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC---CeE
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEE----AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSEL---EAF 315 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~---~~k 315 (468)
..++||||+++++|.+++..... ...+++..++.++.||+.||+||| +.+++||||||+||+++.++ .+|
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~nil~~~~~~~~~~k 159 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE---ENHFIHRDIAARNCLLTCKGPGRVAK 159 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccchheEEEeccCCCcceE
Confidence 89999999999999999876432 234899999999999999999999 77999999999999998764 589
Q ss_pred EeeccccccccCCCCC--ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccc
Q 012219 316 VADFGVARLLNFDSSN--RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLI 392 (468)
Q Consensus 316 l~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~ 392 (468)
|+|||+++........ ......+..|+|||++.+..++.++|||||||++|||++ |+.||+.......... ..
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~----~~ 235 (277)
T cd05036 160 IADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEF----VT 235 (277)
T ss_pred eccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH----HH
Confidence 9999999866322111 111223567999999998899999999999999999997 9999875432211100 00
Q ss_pred cccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 012219 393 DLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFI 440 (468)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~ 440 (468)
........... ...+.+++.+|++.+|++||++.+|+++|.
T Consensus 236 ~~~~~~~~~~~-------~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 236 GGGRLDPPKGC-------PGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred cCCcCCCCCCC-------CHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 00001111111 123678999999999999999999999885
No 158
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=2.9e-39 Score=304.93 Aligned_cols=256 Identities=23% Similarity=0.371 Sum_probs=198.7
Q ss_pred ccccceeeeeCCceEEEEEcCC----CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCE----
Q 012219 172 FHIKYCIGTGGYGSVYRARLPS----GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKC---- 243 (468)
Q Consensus 172 ~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~---- 243 (468)
|.+.+.||+|+||.||+|.... +..||+|.++..... ......+.+|++.++.++|+||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 79 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHT-YSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKI 79 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCC-HHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccC
Confidence 4677889999999999997532 467999998764332 2335678999999999999999999999876544
Q ss_pred --EEEEEEeccCCChhhhhhcCc---ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEee
Q 012219 244 --MFLIYEYMEMGSLFCVLRTDE---EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVAD 318 (468)
Q Consensus 244 --~~lv~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 318 (468)
.++++||+++|+|..++.... ....+++.....++.|++.||.||| +.+++||||||+||++++++.+||+|
T Consensus 80 ~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~d 156 (273)
T cd05035 80 PKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS---NRNFIHRDLAARNCMLREDMTVCVAD 156 (273)
T ss_pred cccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchheEEECCCCeEEECC
Confidence 799999999999999885432 2235889999999999999999999 77999999999999999999999999
Q ss_pred ccccccccCCCCC--ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhccccccccc
Q 012219 319 FGVARLLNFDSSN--RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLL 395 (468)
Q Consensus 319 fg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 395 (468)
||+++........ .....++..|+|||++....++.++|||||||++|||++ |..||........... .....
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~----~~~~~ 232 (273)
T cd05035 157 FGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDY----LRHGN 232 (273)
T ss_pred ccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHH----HHcCC
Confidence 9999876432221 112234678999999988899999999999999999999 8999865443211110 00001
Q ss_pred CCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 396 DPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
........ ...+.+++.+||+.||++||++.++++.|.+.
T Consensus 233 ~~~~~~~~-------~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 233 RLKQPEDC-------LDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CCCCCcCC-------CHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11111111 12377899999999999999999999998763
No 159
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.5e-39 Score=309.62 Aligned_cols=260 Identities=22% Similarity=0.296 Sum_probs=201.7
Q ss_pred HhhCccccceeeeeCCceEEEEEcC------CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR 241 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 241 (468)
..++|++.+.||+|+||.||+|... .+..||+|.+...... .....+.+|+..++.++|+||+++++++...
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASL--RERIEFLNEASVMKGFTCHHVVRLLGVVSKG 81 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCH--HHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 4578999999999999999999643 2457999988754432 2234688999999999999999999999999
Q ss_pred CEEEEEEEeccCCChhhhhhcCcc-------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCe
Q 012219 242 KCMFLIYEYMEMGSLFCVLRTDEE-------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEA 314 (468)
Q Consensus 242 ~~~~lv~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~ 314 (468)
...++||||+++|+|.+++..... ....++..+..++.|++.||.||| +++|+||||||+||++++++.+
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dikp~nili~~~~~~ 158 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTV 158 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCCChheEEEcCCCcE
Confidence 999999999999999999975321 223567788899999999999999 7899999999999999999999
Q ss_pred EEeeccccccccCCCCC--ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhccccc
Q 012219 315 FVADFGVARLLNFDSSN--RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKL 391 (468)
Q Consensus 315 kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~ 391 (468)
+|+|||+++........ .....++..|+|||.+.+..++.++|||||||++|||++ |..||........... .
T Consensus 159 ~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~----~ 234 (288)
T cd05061 159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF----V 234 (288)
T ss_pred EECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH----H
Confidence 99999998765322211 112234678999999998899999999999999999999 7889865432211100 0
Q ss_pred ccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 392 IDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
.+.......... ...+.+++.+|++.||++|||+.++++.|.+..
T Consensus 235 ~~~~~~~~~~~~-------~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 235 MDGGYLDQPDNC-------PERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred HcCCCCCCCCCC-------CHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 000000111111 123778999999999999999999999998743
No 160
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.8e-39 Score=307.68 Aligned_cols=254 Identities=24% Similarity=0.423 Sum_probs=199.4
Q ss_pred hCccccceeeeeCCceEEEEEc------CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL------PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKC 243 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 243 (468)
.++...+.||+|+||.||++.. .++..+++|.+...... ..+.|.+|+++++.++|+||+++++++.....
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 81 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASES---ARQDFQREAELLTVLQHQHIVRFYGVCTEGRP 81 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHH---HHHHHHHHHHHHhcCCCCCCceEEEEEecCCc
Confidence 4677889999999999999953 24568899988754432 34678999999999999999999999999999
Q ss_pred EEEEEEeccCCChhhhhhcCcc------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC
Q 012219 244 MFLIYEYMEMGSLFCVLRTDEE------------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSE 311 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~~------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~ 311 (468)
.++++||+++|+|.+++..... ...+++..++.++.|++.|++||| +.+++||||||+||+++++
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~nil~~~~ 158 (280)
T cd05092 82 LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA---SLHFVHRDLATRNCLVGQG 158 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH---HCCeecccccHhhEEEcCC
Confidence 9999999999999999875432 124789999999999999999999 7899999999999999999
Q ss_pred CCeEEeeccccccccCCCC--CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcc
Q 012219 312 LEAFVADFGVARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKN 388 (468)
Q Consensus 312 ~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~ 388 (468)
+.+||+|||+++....... ......+++.|+|||+..+..++.++|||||||++|||++ |+.||...........
T Consensus 159 ~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~-- 236 (280)
T cd05092 159 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIEC-- 236 (280)
T ss_pred CCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHH--
Confidence 9999999999976532211 1112234678999999998899999999999999999998 9999865432211100
Q ss_pred cccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 012219 389 IKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFI 440 (468)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~ 440 (468)
.............+ ..+.+++.+||+.||++||++++|.+.|+
T Consensus 237 --~~~~~~~~~~~~~~-------~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 237 --ITQGRELERPRTCP-------PEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred --HHcCccCCCCCCCC-------HHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 00000111111111 12668999999999999999999999885
No 161
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2.7e-39 Score=309.76 Aligned_cols=258 Identities=24% Similarity=0.376 Sum_probs=202.6
Q ss_pred hhCccccceeeeeCCceEEEEEc------CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeC
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL------PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHR 241 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 241 (468)
.++|.+.+.||+|+||.||++.. ..+..||+|.++..... ...+.+.+|+++++++ +|+||+++++++...
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 111 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHS--SEREALMSELKIMSHLGNHENIVNLLGACTIG 111 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCCh--HHHHHHHHHHHHHHhccCCCCcceEEEEEecC
Confidence 35799999999999999999963 23557999998765432 2346788999999999 799999999999999
Q ss_pred CEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccc
Q 012219 242 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGV 321 (468)
Q Consensus 242 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 321 (468)
+..++++||+.+|+|.++++.... ..+++.++..++.|++.||+||| +.+++|+||||+||+++.++.++++|||+
T Consensus 112 ~~~~lv~e~~~~~~L~~~i~~~~~-~~l~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~l~dfg~ 187 (302)
T cd05055 112 GPILVITEYCCYGDLLNFLRRKRE-SFLTLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNVLLTHGKIVKICDFGL 187 (302)
T ss_pred CceEEEEEcCCCCcHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeehhhhccceEEEcCCCeEEECCCcc
Confidence 999999999999999999975432 23799999999999999999999 77999999999999999999999999999
Q ss_pred cccccCCCCC--ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCC
Q 012219 322 ARLLNFDSSN--RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPR 398 (468)
Q Consensus 322 ~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 398 (468)
++........ .....++..|+|||.+.+..++.++|||||||++|||++ |+.||........... .....
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~-------~~~~~ 260 (302)
T cd05055 188 ARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYK-------LIKEG 260 (302)
T ss_pred cccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHH-------HHHcC
Confidence 9765432211 112345678999999998889999999999999999998 9999875432211100 01111
Q ss_pred CCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 399 LSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 399 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
......... ...+.+++.+|++.+|++|||+.+++..|.+.
T Consensus 261 ~~~~~~~~~---~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 261 YRMAQPEHA---PAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred CcCCCCCCC---CHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 111000111 11377899999999999999999999998763
No 162
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.8e-39 Score=308.41 Aligned_cols=263 Identities=23% Similarity=0.261 Sum_probs=197.1
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
+|++.+.||+|++|.||+|+. .++..||+|++....... ...+.+.+|+.++++++|||++++++++..+...++|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEE-GVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFE 79 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccC-CchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEe
Confidence 477889999999999999976 468999999987543221 233567889999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|++ ++|.+++........+++..+..++.|++.||+||| +.+++|+||||+||+++.++.++|+|||++.......
T Consensus 80 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 155 (285)
T cd07861 80 FLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCH---SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV 155 (285)
T ss_pred cCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc
Confidence 997 689888876544456899999999999999999999 7899999999999999999999999999997654333
Q ss_pred CCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcc--------------ccccc-
Q 012219 330 SNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKN--------------IKLID- 393 (468)
Q Consensus 330 ~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~--------------~~~~~- 393 (468)
.......+++.|+|||++.+ ..++.++|||||||++|||+||+.||............. ....+
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (285)
T cd07861 156 RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDY 235 (285)
T ss_pred ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHH
Confidence 33333457889999998765 457889999999999999999999986432211000000 00000
Q ss_pred --ccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 394 --LLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 394 --~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
..+.................+.+++.+||+.||++|||+.+++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 236 KNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred HhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 000000000000000011236689999999999999999998853
No 163
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-39 Score=313.73 Aligned_cols=254 Identities=26% Similarity=0.337 Sum_probs=211.3
Q ss_pred hhCccccceeeeeCCceEEEEEcCC-CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CCceeeEEEEEeeCCEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPS-GKVVALKKLHRSETEELASLESFGNEARLLSQIR-HRNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~l 246 (468)
...|.+.+.||+|.||.||++..+. |+.+|+|.+.+.............+|+++|+++. |||||.+.+.+.+....++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 3568888999999999999997654 9999999998776654345568889999999998 9999999999999999999
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC----CCeEEeecccc
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSE----LEAFVADFGVA 322 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~----~~~kl~Dfg~~ 322 (468)
|||++.||.|.+.+... .+++..+..++.|++.++.||| +.||+||||||+|+|+... +.+|++|||++
T Consensus 114 vmEL~~GGeLfd~i~~~----~~sE~da~~~~~~il~av~~lH---~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla 186 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK----HYSERDAAGIIRQILEAVKYLH---SLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLA 186 (382)
T ss_pred EEEecCCchHHHHHHHc----cCCHHHHHHHHHHHHHHHHHHH---hCCceeccCCHHHeeeccccCCCCcEEEeeCCCc
Confidence 99999999999999765 2899999999999999999999 7899999999999999644 47999999999
Q ss_pred ccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCc
Q 012219 323 RLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPP 402 (468)
Q Consensus 323 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (468)
..... .......+||+.|+|||++....|+..+||||+||++|.|++|..||...........-.. .+..+..+
T Consensus 187 ~~~~~-~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~-----~~~~f~~~ 260 (382)
T KOG0032|consen 187 KFIKP-GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILR-----GDFDFTSE 260 (382)
T ss_pred eEccC-CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHc-----CCCCCCCC
Confidence 98875 5667778999999999999999999999999999999999999999986654322221100 11122222
Q ss_pred cchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 403 VDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 403 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
....+.+. ..+++..|+..||.+|+|+.+++++
T Consensus 261 ~w~~is~~---akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 261 PWDDISES---AKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred CccccCHH---HHHHHHHhcccCcccCCCHHHHhcC
Confidence 22222222 5568999999999999999999974
No 164
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=3.8e-39 Score=301.30 Aligned_cols=250 Identities=26% Similarity=0.422 Sum_probs=202.4
Q ss_pred hhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
.++|++.+.||+|+||.||+|... |+.||+|.+..... ..+.+.+|+.++..++|+|++++++++......++||
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 79 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST----AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVT 79 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh----HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEE
Confidence 357888999999999999999874 78999999986643 3467889999999999999999999999888999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++++|.+++..... ..+++..+..++.|++.||.||| +.+++|+||||+||+++.++.++|+|||.++.....
T Consensus 80 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~ 155 (256)
T cd05039 80 EYMAKGSLVDYLRSRGR-AVITLAQQLGFALDVCEGMEYLE---EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQG 155 (256)
T ss_pred EecCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHH---hCCccchhcccceEEEeCCCCEEEcccccccccccc
Confidence 99999999999976442 24899999999999999999999 789999999999999999999999999999766322
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
.. ....+..|+|||++....++.++||||||+++||+++ |+.||............ ............
T Consensus 156 ~~---~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~~---- 224 (256)
T cd05039 156 QD---SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHV----EKGYRMEAPEGC---- 224 (256)
T ss_pred cc---cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH----hcCCCCCCccCC----
Confidence 11 2334567999999988889999999999999999997 99998654322111000 000011111111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHh
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIA 441 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~ 441 (468)
...+.+++.+||..+|++|||+.+++..|..
T Consensus 225 ---~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 225 ---PPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred ---CHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 1236779999999999999999999999865
No 165
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.4e-39 Score=307.09 Aligned_cols=253 Identities=27% Similarity=0.410 Sum_probs=197.3
Q ss_pred HhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeC----
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHR---- 241 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~---- 241 (468)
+.+.|++.+.||+|+||.||+|.. .+++.||+|.+...... ...+.+|+.++.++ +|+|++++++++...
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~----~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE----EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 79 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCcc----HHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCC
Confidence 456788889999999999999975 46889999998754322 35677899999998 699999999998753
Q ss_pred --CEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeec
Q 012219 242 --KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADF 319 (468)
Q Consensus 242 --~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 319 (468)
...+++|||+.+|+|.+++.... ...+++..+..++.|++.|++||| +.+|+|+||||+||++++++.++|+||
T Consensus 80 ~~~~~~iv~e~~~~~~L~~~l~~~~-~~~l~~~~~~~~~~qi~~~l~~LH---~~~ivh~dl~~~nili~~~~~~~l~Df 155 (272)
T cd06637 80 MDDQLWLVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDF 155 (272)
T ss_pred CCcEEEEEEEcCCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHEEECCCCCEEEccC
Confidence 46899999999999999987643 234889999999999999999999 779999999999999999999999999
Q ss_pred cccccccCCCCCceecccccccccccccc-----CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccc
Q 012219 320 GVARLLNFDSSNRTLLAGTYGYIAPELAY-----TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDL 394 (468)
Q Consensus 320 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 394 (468)
|++..............|+..|+|||++. ...++.++|||||||++|||++|+.||............ ...
T Consensus 156 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~----~~~ 231 (272)
T cd06637 156 GVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI----PRN 231 (272)
T ss_pred CCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHH----hcC
Confidence 99976543333334456889999999886 345788999999999999999999998654322111110 000
Q ss_pred cCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 395 LDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
..+..... .. ...+.+++.+||+.+|.+|||+.+++++
T Consensus 232 ~~~~~~~~---~~---~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 232 PAPRLKSK---KW---SKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred CCCCCCCC---Cc---CHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 01111110 11 1126789999999999999999998753
No 166
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.7e-39 Score=312.06 Aligned_cols=259 Identities=24% Similarity=0.357 Sum_probs=201.5
Q ss_pred hhCccccceeeeeCCceEEEEEcC--------CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEe
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLP--------SGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCL 239 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 239 (468)
.++|.+.+.||+|+||.||++... .+..+|+|.+...... .....+.+|++++..+ +|+||+++++++.
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATE--KDLSDLISEMEMMKMIGKHKNIINLLGACT 94 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCCh--HHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence 357899999999999999999642 2357999999865332 2345788899999999 7999999999999
Q ss_pred eCCEEEEEEEeccCCChhhhhhcCcc-------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCce
Q 012219 240 HRKCMFLIYEYMEMGSLFCVLRTDEE-------------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNV 306 (468)
Q Consensus 240 ~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NI 306 (468)
..+..++|+||+++|+|.+++..... ...+++.+++.++.|++.||+||| +.+++||||||+||
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Ni 171 (307)
T cd05098 95 QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNV 171 (307)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCcccccccHHhe
Confidence 99999999999999999999975421 134889999999999999999999 78999999999999
Q ss_pred eeCCCCCeEEeeccccccccCCCCCc--eeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccch
Q 012219 307 LLNSELEAFVADFGVARLLNFDSSNR--TLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSW 383 (468)
Q Consensus 307 ll~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~ 383 (468)
+++.++.+||+|||+++......... ....++..|+|||++.+..++.++|||||||++|||++ |..||........
T Consensus 172 ll~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~ 251 (307)
T cd05098 172 LVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL 251 (307)
T ss_pred EEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHH
Confidence 99999999999999987653211111 11224468999999988889999999999999999998 8899865432111
Q ss_pred hhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 384 SLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
... ............. ...+.+++.+|++.+|++|||+.+|++.|.++.
T Consensus 252 ~~~----~~~~~~~~~~~~~-------~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~ 300 (307)
T cd05098 252 FKL----LKEGHRMDKPSNC-------TNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 300 (307)
T ss_pred HHH----HHcCCCCCCCCcC-------CHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence 100 0000001111111 123667999999999999999999999998754
No 167
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=2e-39 Score=302.98 Aligned_cols=250 Identities=30% Similarity=0.437 Sum_probs=202.0
Q ss_pred hCccccceeeeeCCceEEEEEcCC-CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPS-GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|+..+.||+|+||.||+|...+ ++.+++|.+..... .+++.+|++++++++|+|++++++++......++++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-----~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~ 77 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-----LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVM 77 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-----HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEE
Confidence 578889999999999999998754 78999999875432 468899999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++++|.+++.... ..+++..+..++.|++.|+.||| ..+++|+||+|+||+++.++.++|+|||++......
T Consensus 78 e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~ 152 (256)
T cd06612 78 EYCGAGSVSDIMKITN--KTLTEEEIAAILYQTLKGLEYLH---SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDT 152 (256)
T ss_pred ecCCCCcHHHHHHhCc--cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEECCCCcEEEcccccchhcccC
Confidence 9999999999986533 34899999999999999999999 779999999999999999999999999999876543
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
........++..|+|||++.+..++.++||||||+++|+|++|+.||........... ......+.... ....
T Consensus 153 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~--~~~~- 225 (256)
T cd06612 153 MAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFM----IPNKPPPTLSD--PEKW- 225 (256)
T ss_pred ccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhh----hccCCCCCCCc--hhhc-
Confidence 3333445688899999999888999999999999999999999999875432211110 00000011111 0111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
...+.+++.+||+.+|++|||+.+++.+
T Consensus 226 --~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 226 --SPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred --CHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 1236789999999999999999999853
No 168
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=3.3e-39 Score=302.52 Aligned_cols=252 Identities=24% Similarity=0.394 Sum_probs=199.3
Q ss_pred hCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
++|.+...||+|++|.||+|...++..+|+|.+...... .+.|.+|++++++++|+|++++++++.. ...+++||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e 80 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMM----PEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVTE 80 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCcc----HHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEEE
Confidence 468888999999999999998877778999988654332 3568899999999999999999998854 55789999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|+++|+|.+++.... ...+++..+..++.|++.||.||| +.+++|+||||+||++++++.++|+|||+++......
T Consensus 81 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05069 81 FMGKGSLLDFLKEGD-GKYLKLPQLVDMAAQIADGMAYIE---RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE 156 (260)
T ss_pred cCCCCCHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccCcceEEEcCCCeEEECCCccceEccCCc
Confidence 999999999997543 234789999999999999999999 7899999999999999999999999999997654322
Q ss_pred C-CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 330 S-NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 330 ~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
. ......++..|+|||...+..++.++||||||+++|||+| |+.||......... .. ......+....
T Consensus 157 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~-~~---~~~~~~~~~~~------ 226 (260)
T cd05069 157 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVL-EQ---VERGYRMPCPQ------ 226 (260)
T ss_pred ccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH-HH---HHcCCCCCCCc------
Confidence 1 1112345678999999988889999999999999999999 99998754322111 00 00101111111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHh
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIA 441 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~ 441 (468)
.....+.+++.+||+.||++||+++++.+.|++
T Consensus 227 -~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 227 -GCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred -ccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 111237789999999999999999999998864
No 169
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-42 Score=293.86 Aligned_cols=275 Identities=23% Similarity=0.325 Sum_probs=210.6
Q ss_pred hhCccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.+.|++.+.||+|.|+.||++. .++|+.+|+|.+....... ...+.+.+|+++-+.|+||||+++.+.+.+....++|
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~-~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSA-RDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhcc-ccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 3568888899999999999994 5678889988876544432 2456788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC---CCCeEEeecccccc
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS---ELEAFVADFGVARL 324 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~---~~~~kl~Dfg~~~~ 324 (468)
+|+|+|++|..-+-.. .-+++..+-..+.||+.||.|+| ..+|||||+||+|+++.. ..-+|++|||+|..
T Consensus 89 Fe~m~G~dl~~eIV~R---~~ySEa~aSH~~rQiLeal~yCH---~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~ 162 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVAR---EFYSEADASHCIQQILEALAYCH---SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIE 162 (355)
T ss_pred EecccchHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH---hcCceeccCChhheeeeeccCCCceeecccceEEE
Confidence 9999999997665433 22677888899999999999999 889999999999999943 34689999999998
Q ss_pred ccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccc
Q 012219 325 LNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVD 404 (468)
Q Consensus 325 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (468)
++ ++......+|||+|||||++...+|+..+|||+-|||||-|+.|.+||.+.+.......-..... .+.++..
T Consensus 163 l~-~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~y-----d~~~~~w 236 (355)
T KOG0033|consen 163 VN-DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAY-----DYPSPEW 236 (355)
T ss_pred eC-CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhcccc-----CCCCccc
Confidence 87 66666678899999999999999999999999999999999999999986443221111011111 1222222
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHH-HHHHhcCCCCCCCCcccccHhhh
Q 012219 405 QKIRQDIILVSTVAFSCLRSQPKSRPTMQLVS-NEFIARNKAPMQKPFHEISILEL 459 (468)
Q Consensus 405 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~-~~l~~~~~~~~~~~~~~~~~~~~ 459 (468)
..+.++ -.+++.+||..||.+|.|+.|.+ +.|...........+...+.+++
T Consensus 237 ~~is~~---Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r~~~As~~H~~dtvd~l 289 (355)
T KOG0033|consen 237 DTVTPE---AKSLIRRMLTVNPKKRITADEALKHPWICNRERVASAIHRQDTVDCL 289 (355)
T ss_pred CcCCHH---HHHHHHHHhccChhhhccHHHHhCCchhcchHHHHHHhhhHHHHHHH
Confidence 222232 44688999999999999998777 44544433333334444444443
No 170
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=2.4e-39 Score=314.10 Aligned_cols=257 Identities=26% Similarity=0.331 Sum_probs=194.9
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|++.+.||+|+||.||+++. .+++.||+|++...........+.|.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 4688899999999999999975 468999999997544333344567889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++|+|.+++.... ..+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||++......
T Consensus 81 e~~~g~~L~~~l~~~~--~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (331)
T cd05597 81 DYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVLAIDSVH---QLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLAD 155 (331)
T ss_pred ecCCCCcHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeEECCCCHHHEEECCCCCEEEEECCceeecCCC
Confidence 9999999999996532 23788999999999999999999 789999999999999999999999999998765432
Q ss_pred CC-CceeccccccccccccccC-----CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCc
Q 012219 329 SS-NRTLLAGTYGYIAPELAYT-----MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPP 402 (468)
Q Consensus 329 ~~-~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (468)
.. ......||+.|+|||++.. ..++.++|||||||++|||++|+.||.......... ......... .+...
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~-~i~~~~~~~--~~~~~ 232 (331)
T cd05597 156 GTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG-KIMNHKEHF--QFPPD 232 (331)
T ss_pred CCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHH-HHHcCCCcc--cCCCc
Confidence 22 2223468999999999863 457889999999999999999999997543211100 000000000 01111
Q ss_pred cchhHHHHHHHHHHHHHhcccC--CCCCCCCHHHHHHH
Q 012219 403 VDQKIRQDIILVSTVAFSCLRS--QPKSRPTMQLVSNE 438 (468)
Q Consensus 403 ~~~~~~~~~~~l~~l~~~cl~~--dP~~RPs~~~v~~~ 438 (468)
.. ...+ .+.+++.+|+.. ++..||++++++++
T Consensus 233 ~~-~~~~---~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 233 VT-DVSE---EAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred cC-CCCH---HHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 00 0111 245567776654 33448899999866
No 171
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=3.9e-39 Score=306.04 Aligned_cols=262 Identities=29% Similarity=0.427 Sum_probs=197.8
Q ss_pred hCccccceeeeeCCceEEEEEc-----CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee--CC
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-----PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH--RK 242 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~ 242 (468)
.+|.+.+.||+|+||.||++.. .++..||+|++...... ..+.|.+|++++++++||||+++++++.. ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAE---HLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHH---HHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCC
Confidence 4688889999999999999964 35789999998765432 34678899999999999999999998754 34
Q ss_pred EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccc
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVA 322 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~ 322 (468)
..++|+||+++|+|.+++.... ..+++..++.++.|++.||+||| +.+++||||||+||+++.++.+||+|||++
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~--~~l~~~~~~~~~~~l~~aL~~LH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~ 155 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKHR--ERLDHRKLLLYASQICKGMEYLG---SKRYVHRDLATRNILVESENRVKIGDFGLT 155 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhcC--cCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHhhEEECCCCeEEECCCccc
Confidence 6899999999999999987543 23889999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCCc---eeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccc--------cc
Q 012219 323 RLLNFDSSNR---TLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNI--------KL 391 (468)
Q Consensus 323 ~~~~~~~~~~---~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~--------~~ 391 (468)
+......... ....++..|+|||+..+..++.++|||||||++|||++|..|+.............. ..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd05081 156 KVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHL 235 (284)
T ss_pred ccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHH
Confidence 8764322211 111234469999999888899999999999999999998877543221100000000 00
Q ss_pred ccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 392 IDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
.+.+......+..... ...+.+++.+||..+|++|||+++|++.|..+
T Consensus 236 ~~~~~~~~~~~~~~~~---~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 236 IELLKNNGRLPAPPGC---PAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHHhcCCcCCCCCCC---CHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 0111111010001111 12377899999999999999999999998764
No 172
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=2.4e-39 Score=306.22 Aligned_cols=256 Identities=24% Similarity=0.322 Sum_probs=202.0
Q ss_pred hhCccccceeeeeCCceEEEEEcC------CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK 242 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 242 (468)
.++|.+.+.||+|+||.||+|... .+..||+|.+...... .....+.+|+.++..++|+||+++++++....
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~ 82 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASM--RERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ 82 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCH--HHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC
Confidence 357888999999999999999753 3468999998755432 23457889999999999999999999999999
Q ss_pred EEEEEEEeccCCChhhhhhcCcc-------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeE
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEE-------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAF 315 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~-------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~k 315 (468)
..++||||+++|+|.+++..... ...+++..++.++.|++.||.||| +.+++||||||+||+++.++.+|
T Consensus 83 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~di~p~nill~~~~~~k 159 (277)
T cd05032 83 PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA---AKKFVHRDLAARNCMVAEDLTVK 159 (277)
T ss_pred CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccChheEEEcCCCCEE
Confidence 99999999999999999865321 224788999999999999999999 78999999999999999999999
Q ss_pred EeeccccccccCCCC--CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccc
Q 012219 316 VADFGVARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLI 392 (468)
Q Consensus 316 l~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~ 392 (468)
|+|||+++....... ......++..|+|||.+.+..++.++|||||||++||++| |+.||........... ..
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~----~~ 235 (277)
T cd05032 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKF----VI 235 (277)
T ss_pred ECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHH----Hh
Confidence 999999976543221 1122346788999999988889999999999999999998 9999865432211110 00
Q ss_pred cccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 012219 393 DLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFI 440 (468)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~ 440 (468)
....+...... ...+.+++.+||+.+|++|||+.++++.|+
T Consensus 236 ~~~~~~~~~~~-------~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 236 DGGHLDLPENC-------PDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred cCCCCCCCCCC-------CHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 10011111111 123778999999999999999999999875
No 173
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=7.5e-40 Score=306.58 Aligned_cols=255 Identities=29% Similarity=0.419 Sum_probs=200.0
Q ss_pred ccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEe
Q 012219 172 FHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEY 250 (468)
Q Consensus 172 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (468)
|++.+.||+|+||+||+++.. +++.+|+|.+......... .....+|+.++++++||||+++++++......+++|||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~ 79 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEE-REENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY 79 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHH-HHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccc-cchhhhhhhccccccccccccccccccccccccccccc
Confidence 567889999999999999754 5678999999987665432 23345699999999999999999999999999999999
Q ss_pred ccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCC
Q 012219 251 MEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSS 330 (468)
Q Consensus 251 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 330 (468)
+++++|.+++.. ...+++..++.++.|++.||++|| +.+++|+||||+||+++.++.++|+|||.+........
T Consensus 80 ~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~L~~Lh---~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~ 153 (260)
T PF00069_consen 80 CPGGSLQDYLQK---NKPLSEEEILKIAYQILEALAYLH---SKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNE 153 (260)
T ss_dssp ETTEBHHHHHHH---HSSBBHHHHHHHHHHHHHHHHHHH---HTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTS
T ss_pred cccccccccccc---cccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccc
Confidence 999999999983 234899999999999999999999 67999999999999999999999999999976433334
Q ss_pred Cceecccccccccccccc-CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHH
Q 012219 331 NRTLLAGTYGYIAPELAY-TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQ 409 (468)
Q Consensus 331 ~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (468)
......++..|+|||+.. +..++.++||||+|+++|+|++|..||............................ .
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 228 (260)
T PF00069_consen 154 NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSR-----E 228 (260)
T ss_dssp EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHT-----T
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccc-----h
Confidence 444567899999999998 8889999999999999999999999988652111000000000000000000000 0
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 410 DIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 410 ~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
....+.+++.+||+.||++||++.+++++
T Consensus 229 ~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 229 KSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp SHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred hHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 01348889999999999999999999853
No 174
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=4.7e-39 Score=302.83 Aligned_cols=258 Identities=24% Similarity=0.354 Sum_probs=199.3
Q ss_pred HHHhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEE
Q 012219 166 IEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCM 244 (468)
Q Consensus 166 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 244 (468)
+.+++.+.....||+|+||.||+|.. .++..|++|.+...... ..+.+.+|++++++++|+||+++++++...+..
T Consensus 4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (268)
T cd06624 4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSR---YVQPLHEEIALHSYLKHRNIVQYLGSDSENGFF 80 (268)
T ss_pred ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHH---HHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEE
Confidence 34456666778899999999999974 46788999988765433 346788999999999999999999999999999
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC-CCCeEEeeccccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS-ELEAFVADFGVAR 323 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~-~~~~kl~Dfg~~~ 323 (468)
++++||+++++|.+++.........++..+..++.||+.||+||| +.+|+||||||+||+++. ++.++|+|||++.
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~ 157 (268)
T cd06624 81 KIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLH---DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSK 157 (268)
T ss_pred EEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCeEEEecchhhe
Confidence 999999999999999976433222378888899999999999999 789999999999999976 6799999999987
Q ss_pred cccCCCCCceeccccccccccccccCC--CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 324 LLNFDSSNRTLLAGTYGYIAPELAYTM--VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 324 ~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
.............++..|+|||++... .++.++||||||+++|+|++|+.||............. . .....+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~-~-~~~~~~~~~~ 235 (268)
T cd06624 158 RLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKV-G-MFKIHPEIPE 235 (268)
T ss_pred ecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhh-h-hhccCCCCCc
Confidence 654333333334678999999998654 37889999999999999999999986433211111000 0 0001111111
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
... ..+.+++.+||+.+|++|||+.+++.+
T Consensus 236 ~~~-------~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 236 SLS-------AEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred ccC-------HHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 111 226678999999999999999998864
No 175
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=4.2e-39 Score=302.99 Aligned_cols=255 Identities=27% Similarity=0.400 Sum_probs=201.0
Q ss_pred hCccccceeeeeCCceEEEEEcC----CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP----SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMF 245 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 245 (468)
++|.+.+.||+|+||.||+|... .+..+|+|.++..... ...+.|.+|+.++.+++||||+++++++...+..+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 81 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTE--KQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVM 81 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCH--HHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 56888999999999999999753 2347999998754432 23567899999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccc
Q 012219 246 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLL 325 (468)
Q Consensus 246 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 325 (468)
+||||+++++|.+++.... ..+++.+++.++.|++.|+.||| +.+++||||||+||+++.++.++++|||++...
T Consensus 82 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH---~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd05066 82 IVTEYMENGSLDAFLRKHD--GQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVL 156 (267)
T ss_pred EEEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCEeehhhchhcEEECCCCeEEeCCCCccccc
Confidence 9999999999999997643 24789999999999999999999 789999999999999999999999999999876
Q ss_pred cCCCCCce---eccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 326 NFDSSNRT---LLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 326 ~~~~~~~~---~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
........ ...++..|+|||++.+..++.++||||||+++||+++ |+.||........ .. ...+........
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~-~~---~~~~~~~~~~~~ 232 (267)
T cd05066 157 EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDV-IK---AIEEGYRLPAPM 232 (267)
T ss_pred ccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHH-HH---HHhCCCcCCCCC
Confidence 43222111 1123467999999998889999999999999999887 9999865432111 11 011111111111
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
.. ...+.+++.+|++.+|++||+|.++++.|.+.
T Consensus 233 ~~-------~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 233 DC-------PAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred CC-------CHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 11 12266899999999999999999999998764
No 176
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=5.7e-39 Score=300.31 Aligned_cols=247 Identities=25% Similarity=0.367 Sum_probs=194.6
Q ss_pred ceeeeeCCceEEEEEcC--C--CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEec
Q 012219 176 YCIGTGGYGSVYRARLP--S--GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYM 251 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~~--~--~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 251 (468)
+.||+|+||.||+|... + +..+|+|.+...... ...+.+.+|+++++++.|+|++++++++.. +..++||||+
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~ 77 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA--AGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLMLVMELA 77 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEEEEEeC
Confidence 36999999999999642 2 368999999866543 234678899999999999999999998864 4579999999
Q ss_pred cCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCC
Q 012219 252 EMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSN 331 (468)
Q Consensus 252 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 331 (468)
++|+|.+++.... .+++..++.++.|++.||+||| ..+++|+||||+||+++.++.+||+|||+++........
T Consensus 78 ~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lh---~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~ 151 (257)
T cd05060 78 PLGPLLKYLKKRR---EIPVSDLKELAHQVAMGMAYLE---SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY 151 (257)
T ss_pred CCCcHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHh---hcCeeccCcccceEEEcCCCcEEeccccccceeecCCcc
Confidence 9999999997654 4899999999999999999999 789999999999999999999999999999876433222
Q ss_pred cee---ccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 332 RTL---LAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 332 ~~~---~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
... ..++..|+|||...+..++.++||||||+++|||++ |+.||............ . ...........
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~-~---~~~~~~~~~~~---- 223 (257)
T cd05060 152 YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAML-E---SGERLPRPEEC---- 223 (257)
T ss_pred cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH-H---cCCcCCCCCCC----
Confidence 111 123467999999998899999999999999999998 99998754432111110 0 00000011111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
...+.+++.+||..+|++||++.++.+.|.+.
T Consensus 224 ---~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 224 ---PQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred ---CHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 12367899999999999999999999999875
No 177
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=4.2e-39 Score=301.06 Aligned_cols=248 Identities=25% Similarity=0.383 Sum_probs=196.9
Q ss_pred hCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEe-eCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCL-HRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~~lv~ 248 (468)
++|.+.+.||+|+||.||++... |..+|+|.+..... .+.|.+|+.++++++|+|++++++++. ..+..++++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~~-----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDAT-----AQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 79 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCch-----HHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEE
Confidence 46888999999999999999774 77899999865432 357889999999999999999999765 456789999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++++|.+++..... ..+++..++.++.|++.||+||| +.+++||||||+||++++++.+||+|||+++.....
T Consensus 80 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 155 (256)
T cd05082 80 EYMAKGSLVDYLRSRGR-SVLGGDCLLKFSLDVCEAMEYLE---ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 155 (256)
T ss_pred ECCCCCcHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHH---hCCEeccccchheEEEcCCCcEEecCCccceecccc
Confidence 99999999999876433 34789999999999999999999 789999999999999999999999999998764322
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
. ....++..|+|||+.....++.++|||||||++|||++ |+.||............ .....+......
T Consensus 156 ~---~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~~---- 224 (256)
T cd05082 156 Q---DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV----EKGYKMDAPDGC---- 224 (256)
T ss_pred C---CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH----hcCCCCCCCCCC----
Confidence 1 22334568999999988889999999999999999998 99998644321111100 000011111111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHh
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIA 441 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~ 441 (468)
...+.+++.+|++.+|++|||+.++.+.|..
T Consensus 225 ---~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 225 ---PPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred ---CHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 1236779999999999999999999998865
No 178
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=3.6e-39 Score=302.35 Aligned_cols=254 Identities=26% Similarity=0.462 Sum_probs=203.4
Q ss_pred hhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
.++|.+.+.||+|+||.||+|..++++.+|+|.+...... .+.+.+|+.++++++|+|++++++++......+++|
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMS----PEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVT 80 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCccC----HHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEE
Confidence 4678999999999999999999888889999999765432 357889999999999999999999999888899999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++++|.+++.... ...+++..+..++.|++.|+.||| +.+++|+||||+||++++++.++++|||+++.....
T Consensus 81 e~~~~~~L~~~i~~~~-~~~~~~~~~~~~~~~i~~al~~lh---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (261)
T cd05034 81 EYMSKGSLLDFLKSGE-GKKLRLPQLVDMAAQIAEGMAYLE---SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDD 156 (261)
T ss_pred eccCCCCHHHHHhccc-cCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcchheEEEcCCCCEEECccccceeccch
Confidence 9999999999997643 234899999999999999999999 779999999999999999999999999998765421
Q ss_pred CCC-ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchh
Q 012219 329 SSN-RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQK 406 (468)
Q Consensus 329 ~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (468)
... .....++..|+|||.+.+..++.++||||||+++||++| |+.||........ ... .............
T Consensus 157 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~-~~~---~~~~~~~~~~~~~--- 229 (261)
T cd05034 157 EYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREV-LEQ---VERGYRMPRPPNC--- 229 (261)
T ss_pred hhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH-HHH---HHcCCCCCCCCCC---
Confidence 111 112234568999999998889999999999999999999 9999865432111 111 0110111111111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHh
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIA 441 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~ 441 (468)
...+.+++.+|++.+|++||+++++.+.|+.
T Consensus 230 ----~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 230 ----PEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred ----CHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 1237789999999999999999999988863
No 179
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2.1e-39 Score=310.69 Aligned_cols=259 Identities=25% Similarity=0.404 Sum_probs=199.3
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCC--EEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGK--VVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCMF 245 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 245 (468)
++|++.+.||+|+||.||+|... ++. .+++|.+...... ...+.|.+|++++.++ +|+||+++++++...+..+
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~ 84 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK--DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLY 84 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCH--HHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCce
Confidence 56888999999999999999753 444 4577777643322 2346788999999999 8999999999999999999
Q ss_pred EEEEeccCCChhhhhhcCcc-------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC
Q 012219 246 LIYEYMEMGSLFCVLRTDEE-------------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSEL 312 (468)
Q Consensus 246 lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~ 312 (468)
+|+||+++|+|.++++.... ...+++.+++.++.|++.|++||| +.+++||||||+||+++.++
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dlkp~Nili~~~~ 161 (303)
T cd05088 85 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENY 161 (303)
T ss_pred EEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH---hCCccccccchheEEecCCC
Confidence 99999999999999975421 224789999999999999999999 78999999999999999999
Q ss_pred CeEEeeccccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhccccc
Q 012219 313 EAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKL 391 (468)
Q Consensus 313 ~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~ 391 (468)
.+||+|||+++..... .......++..|+|||+..+..++.++|||||||++|||+| |..||........... .
T Consensus 162 ~~kl~dfg~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~----~ 236 (303)
T cd05088 162 VAKIADFGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK----L 236 (303)
T ss_pred cEEeCccccCcccchh-hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHH----H
Confidence 9999999998643211 11111234567999999988889999999999999999998 9999865432211110 0
Q ss_pred ccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 392 IDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
............. ..+.+++.+||+.+|++||++++++..+.++...
T Consensus 237 ~~~~~~~~~~~~~-------~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~ 283 (303)
T cd05088 237 PQGYRLEKPLNCD-------DEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 283 (303)
T ss_pred hcCCcCCCCCCCC-------HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 0000011111111 1267899999999999999999999998776443
No 180
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=2.3e-39 Score=311.42 Aligned_cols=260 Identities=20% Similarity=0.262 Sum_probs=195.6
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|+||.||+|+.. +++.||+|.+....... ....+.+|++++++++||||+++++++..++..++||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 83 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG--APCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVF 83 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCC--cchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEE
Confidence 56888999999999999999754 67889999987544321 2345778999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++ +|.+++.... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 84 e~~~~-~l~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 157 (309)
T cd07872 84 EYLDK-DLKQYMDDCG--NIMSMHNVKIFLYQILRGLAYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSVP 157 (309)
T ss_pred eCCCC-CHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECccccceecCCC
Confidence 99975 8888776543 23788899999999999999999 789999999999999999999999999999765433
Q ss_pred CCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhh--c------------cccccc
Q 012219 329 SSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLD--K------------NIKLID 393 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~--~------------~~~~~~ 393 (468)
........+++.|+|||.+.+ ..++.++|||||||++|||+||+.||........... . .....+
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
T cd07872 158 TKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDE 237 (309)
T ss_pred ccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhh
Confidence 333334567899999998765 5688999999999999999999999965432110000 0 000000
Q ss_pred ccC---CCCCC-ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 394 LLD---PRLSP-PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 394 ~~~---~~~~~-~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
..+ +.... ............+.+++.+|++.||.+|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 238 FKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 000 00000 000000001123668999999999999999999985
No 181
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.1e-39 Score=303.90 Aligned_cols=253 Identities=27% Similarity=0.402 Sum_probs=198.4
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|+||.||+|.. .+++.||+|.++..... ....+.+|+.+++.++||||+++++++...+..++++
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~ 85 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGE---DFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICM 85 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchh---HHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Confidence 4678888999999999999975 56889999998765432 2356778999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++++|.+++.... .+++.+.+.++.|++.|+.||| +.+++|+||||+||+++.++.++|+|||++......
T Consensus 86 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd06645 86 EFCGGGSLQDIYHVTG---PLSESQIAYVSRETLQGLYYLH---SKGKMHRDIKGANILLTDNGHVKLADFGVSAQITAT 159 (267)
T ss_pred eccCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEECcceeeeEccCc
Confidence 9999999999987543 3889999999999999999999 779999999999999999999999999998766433
Q ss_pred CCCceecccccccccccccc---CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccch
Q 012219 329 SSNRTLLAGTYGYIAPELAY---TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQ 405 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (468)
........|+..|+|||++. ...++.++|||||||++|+|++|+.||............ .......+......
T Consensus 160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~-- 235 (267)
T cd06645 160 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLM--TKSNFQPPKLKDKM-- 235 (267)
T ss_pred ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhh--hccCCCCCcccccC--
Confidence 33334457899999999874 456889999999999999999999998543321111100 00000111111100
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 406 KIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 406 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
... ..+.+++.+|+..+|++||++++++++
T Consensus 236 ~~~---~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 236 KWS---NSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred CCC---HHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 011 126679999999999999999998753
No 182
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.2e-39 Score=308.87 Aligned_cols=259 Identities=24% Similarity=0.348 Sum_probs=202.1
Q ss_pred hhCccccceeeeeCCceEEEEEc--------CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEe
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL--------PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCL 239 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 239 (468)
.++|.+...||+|+||.||+|+. .++..||+|.+...... ...+.+.+|+.++..+ +||||+++++++.
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 91 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATE--KDLSDLVSEMEMMKMIGKHKNIINLLGACT 91 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccch--HHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence 46788899999999999999963 13457999998754322 2356788999999999 8999999999999
Q ss_pred eCCEEEEEEEeccCCChhhhhhcCcc-------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCce
Q 012219 240 HRKCMFLIYEYMEMGSLFCVLRTDEE-------------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNV 306 (468)
Q Consensus 240 ~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NI 306 (468)
.....+++|||+++|+|.+++..... ...+++.+++.++.||+.||.||| +.+++||||||+||
T Consensus 92 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Ni 168 (304)
T cd05101 92 QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA---SQKCIHRDLAARNV 168 (304)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH---HCCeeecccccceE
Confidence 99999999999999999999975321 234788899999999999999999 78999999999999
Q ss_pred eeCCCCCeEEeeccccccccCCCCC--ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccch
Q 012219 307 LLNSELEAFVADFGVARLLNFDSSN--RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSW 383 (468)
Q Consensus 307 ll~~~~~~kl~Dfg~~~~~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~ 383 (468)
+++.++.+||+|||+++........ .....++..|+|||++.+..++.++||||||+++|||++ |..||........
T Consensus 169 li~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~ 248 (304)
T cd05101 169 LVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL 248 (304)
T ss_pred EEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH
Confidence 9999999999999999876432221 112235678999999988889999999999999999998 8888865432211
Q ss_pred hhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 384 SLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
.... ........... ....+.+++.+||+.+|++|||+.++++.|.++.
T Consensus 249 ~~~~----~~~~~~~~~~~-------~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~ 297 (304)
T cd05101 249 FKLL----KEGHRMDKPAN-------CTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRIL 297 (304)
T ss_pred HHHH----HcCCcCCCCCC-------CCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHH
Confidence 1100 00000001111 1123667999999999999999999999998753
No 183
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=4e-39 Score=301.33 Aligned_cols=248 Identities=27% Similarity=0.427 Sum_probs=197.0
Q ss_pred ceeeeeCCceEEEEEcCC--C--CEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEec
Q 012219 176 YCIGTGGYGSVYRARLPS--G--KVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYM 251 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 251 (468)
+.||+|++|.||+|.+.+ + ..||+|.+...... ...+.|.+|++.+++++|+||+++++++.. ...++++||+
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~ 77 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS--DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELA 77 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH--HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEec
Confidence 358999999999997533 3 36899999876653 346789999999999999999999999988 8899999999
Q ss_pred cCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCC
Q 012219 252 EMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSN 331 (468)
Q Consensus 252 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 331 (468)
++|+|.+++..... ..+++...+.++.|++.||+||| +.+++|+||+|+||+++.++.+||+|||+++........
T Consensus 78 ~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 153 (257)
T cd05040 78 PLGSLLDRLRKDAL-GHFLISTLCDYAVQIANGMRYLE---SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH 153 (257)
T ss_pred CCCcHHHHHHhccc-ccCcHHHHHHHHHHHHHHHHHHH---hCCccccccCcccEEEecCCEEEeccccccccccccccc
Confidence 99999999976543 45899999999999999999999 789999999999999999999999999999876432211
Q ss_pred ---ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 332 ---RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 332 ---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
.....++..|+|||++.+..++.++|||||||++|||++ |+.||............ .. . ......+ .
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~-~~---~-~~~~~~~--~-- 224 (257)
T cd05040 154 YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKI-DK---E-GERLERP--E-- 224 (257)
T ss_pred eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-Hh---c-CCcCCCC--c--
Confidence 112346778999999998899999999999999999999 99998654322111110 00 0 0001100 0
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFI 440 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~ 440 (468)
.....+.+++.+|++.+|++||++.++++.|.
T Consensus 225 -~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 225 -ACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred -cCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 01123778999999999999999999998874
No 184
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=5e-39 Score=302.61 Aligned_cols=255 Identities=30% Similarity=0.414 Sum_probs=199.8
Q ss_pred hCccccceeeeeCCceEEEEEcC-CC---CEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SG---KVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMF 245 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 245 (468)
++|+..+.||+|+||.||+|... ++ ..+|+|.+...... ...+.+..|++++.+++|+|++++.+++...+..+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTE--KQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAM 82 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCH--HHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcE
Confidence 56888899999999999999764 23 37999988754322 23467889999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccc
Q 012219 246 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLL 325 (468)
Q Consensus 246 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 325 (468)
+||||+++++|.+++.... ..+++.++..++.|++.|++||| +.+++|+||||+||+++.++.+||+|||++...
T Consensus 83 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 157 (268)
T cd05063 83 IITEYMENGALDKYLRDHD--GEFSSYQLVGMLRGIAAGMKYLS---DMNYVHRDLAARNILVNSNLECKVSDFGLSRVL 157 (268)
T ss_pred EEEEcCCCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeccccchhhEEEcCCCcEEECCCccceec
Confidence 9999999999999987543 34899999999999999999999 789999999999999999999999999999765
Q ss_pred cCCCCCce---eccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 326 NFDSSNRT---LLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 326 ~~~~~~~~---~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
........ ....+..|+|||++....++.++|||||||++||+++ |+.||........... +... ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~----i~~~----~~~ 229 (268)
T cd05063 158 EDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKA----INDG----FRL 229 (268)
T ss_pred ccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHH----HhcC----CCC
Confidence 43221111 1123457999999988889999999999999999998 9999864432111110 0000 010
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
+... .....+.+++.+||+.+|++||++.+|++.|.++
T Consensus 230 ~~~~---~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 230 PAPM---DCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CCCC---CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0000 1112367899999999999999999999999764
No 185
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=3.2e-39 Score=314.71 Aligned_cols=260 Identities=23% Similarity=0.357 Sum_probs=199.1
Q ss_pred hhCccccceeeeeCCceEEEEEc------CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeC
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL------PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHR 241 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 241 (468)
.++|.+.+.||+|+||.||+|.. .+++.||||+++..... ...+.+.+|+.++.++ +|+||++++++|...
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATH--SEHRALMSELKILIHIGHHLNVVNLLGACTKP 83 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCCh--HHHHHHHHHHHHHHhccCCccHhhhcceeecC
Confidence 36799999999999999999963 35788999999764432 2346788999999999 689999999988654
Q ss_pred -CEEEEEEEeccCCChhhhhhcCcc-------------------------------------------------------
Q 012219 242 -KCMFLIYEYMEMGSLFCVLRTDEE------------------------------------------------------- 265 (468)
Q Consensus 242 -~~~~lv~e~~~~gsL~~~l~~~~~------------------------------------------------------- 265 (468)
...+++|||+++|+|.+++.....
T Consensus 84 ~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (343)
T cd05103 84 GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 163 (343)
T ss_pred CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchh
Confidence 457899999999999999864311
Q ss_pred ---------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCC--Ccee
Q 012219 266 ---------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSS--NRTL 334 (468)
Q Consensus 266 ---------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~--~~~~ 334 (468)
...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....... ....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 240 (343)
T cd05103 164 EEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGD 240 (343)
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCC
Confidence 123678888999999999999999 78999999999999999999999999999976532211 1112
Q ss_pred ccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHH
Q 012219 335 LAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIIL 413 (468)
Q Consensus 335 ~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (468)
..++..|+|||.+.+..++.++||||||+++|||++ |..||............ .............. ..
T Consensus 241 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~-------~~ 310 (343)
T cd05103 241 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR---LKEGTRMRAPDYTT-------PE 310 (343)
T ss_pred CCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHH---HhccCCCCCCCCCC-------HH
Confidence 235667999999988899999999999999999997 99998654322111110 00000011111111 12
Q ss_pred HHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 414 VSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 414 l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
+.+++..||+.||++|||+.+++++|....
T Consensus 311 ~~~~~~~cl~~~p~~Rps~~eil~~l~~~~ 340 (343)
T cd05103 311 MYQTMLDCWHGEPSQRPTFSELVEHLGNLL 340 (343)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 678899999999999999999999998753
No 186
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=4.7e-40 Score=319.09 Aligned_cols=243 Identities=24% Similarity=0.326 Sum_probs=187.2
Q ss_pred eeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc---cCCceeeEEEEEeeCCEEEEEEEeccC
Q 012219 178 IGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQI---RHRNIVKLYGFCLHRKCMFLIYEYMEM 253 (468)
Q Consensus 178 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~ 253 (468)
||+|+||+||+|+. .+++.||+|++.............+..|..++... +||||+++++++......++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 69999999999975 46899999999754433323344556677777665 699999999999999999999999999
Q ss_pred CChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCce
Q 012219 254 GSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRT 333 (468)
Q Consensus 254 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 333 (468)
|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.++|+|||+++..........
T Consensus 81 g~L~~~l~~~~---~~~~~~~~~~~~qil~al~~LH---~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~ 154 (330)
T cd05586 81 GELFWHLQKEG---RFSEDRAKFYIAELVLALEHLH---KYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTN 154 (330)
T ss_pred ChHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCcc
Confidence 99999887543 3889999999999999999999 78999999999999999999999999999876433333344
Q ss_pred eccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHH
Q 012219 334 LLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDII 412 (468)
Q Consensus 334 ~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (468)
...||..|+|||++.+. .++.++|||||||++|||+||+.||........... .. .-...+.... ...
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~--i~---~~~~~~~~~~---~~~--- 223 (330)
T cd05586 155 TFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRN--IA---FGKVRFPKNV---LSD--- 223 (330)
T ss_pred CccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHH--HH---cCCCCCCCcc---CCH---
Confidence 56799999999988754 588999999999999999999999865332111000 00 0011111110 111
Q ss_pred HHHHHHHhcccCCCCCCC----CHHHHHH
Q 012219 413 LVSTVAFSCLRSQPKSRP----TMQLVSN 437 (468)
Q Consensus 413 ~l~~l~~~cl~~dP~~RP----s~~~v~~ 437 (468)
.+.+++.+||+.||++|| ++.++++
T Consensus 224 ~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 224 EGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred HHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 256789999999999998 4666654
No 187
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=3.7e-39 Score=306.80 Aligned_cols=257 Identities=25% Similarity=0.407 Sum_probs=201.0
Q ss_pred hhCccccceeeeeCCceEEEEEcC------CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK 242 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 242 (468)
.++|++...||+|+||.||+|... ++..||+|.+...... ...+.|.+|+.++++++||||+++++++....
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~ 81 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASA--DMQADFQREAALMAEFDHPNIVKLLGVCAVGK 81 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCH--HHHHHHHHHHHHHHhcCCCchheEEEEEcCCC
Confidence 357889999999999999999753 4678999998755432 23467889999999999999999999999999
Q ss_pred EEEEEEEeccCCChhhhhhcCc-------------------ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDE-------------------EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISS 303 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~-------------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~ 303 (468)
..++++||+++|+|.+++.... ....+++..++.++.|++.||+||| ..+++||||||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH---~~~i~H~dl~p 158 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS---ERKFVHRDLAT 158 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCeecccccH
Confidence 9999999999999999986421 1234788899999999999999999 78999999999
Q ss_pred CceeeCCCCCeEEeeccccccccCCCC--CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccc
Q 012219 304 NNVLLNSELEAFVADFGVARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSS 380 (468)
Q Consensus 304 ~NIll~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~ 380 (468)
+||+++.++.++|+|||+++....... .......+..|+|||...+..++.++|||||||++|||++ |..||.....
T Consensus 159 ~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~ 238 (288)
T cd05050 159 RNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH 238 (288)
T ss_pred hheEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999876532221 1112234567999999988899999999999999999998 8888864432
Q ss_pred cchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHh
Q 012219 381 SSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIA 441 (468)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~ 441 (468)
...... ....+. ...... ....+.+++.+|++.+|++|||+.|+++.|++
T Consensus 239 ~~~~~~--~~~~~~--~~~~~~-------~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 239 EEVIYY--VRDGNV--LSCPDN-------CPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred HHHHHH--HhcCCC--CCCCCC-------CCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 211110 000000 001111 11237789999999999999999999998863
No 188
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=6.8e-39 Score=306.08 Aligned_cols=256 Identities=26% Similarity=0.375 Sum_probs=203.7
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
.+|+..+.||.|++|.||+|.. .+++.|++|.+...... ..+.+.+|+++++.++|+|++++++++...+..++|+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 95 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQP---KKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVM 95 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCc---hHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEE
Confidence 4688899999999999999964 67899999998754332 2456789999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++++|.+++... .+++.++..++.|++.|++||| +.+++||||||+||+++.++.++|+|||++......
T Consensus 96 e~~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH---~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~ 168 (296)
T cd06655 96 EYLAGGSLTDVVTET----CMDEAQIAAVCRECLQALEFLH---ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPE 168 (296)
T ss_pred EecCCCcHHHHHHhc----CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccchhcccc
Confidence 999999999988643 3889999999999999999999 789999999999999999999999999998876544
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
........++..|+|||.+.+..++.++|||||||++|+|++|+.||............ .....+.+..+ .
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~----~~~~~~~~~~~--~--- 239 (296)
T cd06655 169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI----ATNGTPELQNP--E--- 239 (296)
T ss_pred cccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH----HhcCCcccCCc--c---
Confidence 33333456888999999999888999999999999999999999998754322111100 00000111111 0
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHH-HHHHhcCC
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPTMQLVS-NEFIARNK 444 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs~~~v~-~~l~~~~~ 444 (468)
.....+.+++.+||..||++||++.+++ +.|.+...
T Consensus 240 ~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~ 276 (296)
T cd06655 240 KLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAK 276 (296)
T ss_pred cCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcc
Confidence 0111266789999999999999998888 45555433
No 189
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=6.2e-39 Score=300.38 Aligned_cols=249 Identities=28% Similarity=0.442 Sum_probs=200.8
Q ss_pred ceeeeeCCceEEEEEcCC----CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEec
Q 012219 176 YCIGTGGYGSVYRARLPS----GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYM 251 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 251 (468)
+.||+|+||.||+|.... +..+++|.+....... ..+.+.+|++.+..++|+|++++++++......++++||+
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 78 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE--ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYM 78 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh--HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEec
Confidence 369999999999997643 8889999998765443 4578889999999999999999999999999999999999
Q ss_pred cCCChhhhhhcCcc------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccc
Q 012219 252 EMGSLFCVLRTDEE------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLL 325 (468)
Q Consensus 252 ~~gsL~~~l~~~~~------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 325 (468)
++++|.+++..... ...+++.+++.++.|++.||+||| +.+++|+||+|+||+++.++.++|+|||.+...
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH---~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 155 (262)
T cd00192 79 EGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA---SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDV 155 (262)
T ss_pred cCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH---cCCcccCccCcceEEECCCCcEEEccccccccc
Confidence 99999999987521 245899999999999999999999 789999999999999999999999999999876
Q ss_pred cCCC--CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCc
Q 012219 326 NFDS--SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPP 402 (468)
Q Consensus 326 ~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (468)
.... .......++..|+|||.+....++.++||||+|+++|||++ |..||........... ............
T Consensus 156 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~ 231 (262)
T cd00192 156 YDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEY----LRKGYRLPKPEY 231 (262)
T ss_pred ccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHH----HHcCCCCCCCcc
Confidence 5432 12233457889999999988889999999999999999999 6999876532211111 111111111111
Q ss_pred cchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 012219 403 VDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFI 440 (468)
Q Consensus 403 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~ 440 (468)
. ...+.+++.+|++.+|++|||+.++++.|+
T Consensus 232 ~-------~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 232 C-------PDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred C-------ChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 1 123778999999999999999999998873
No 190
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.8e-39 Score=317.36 Aligned_cols=200 Identities=28% Similarity=0.337 Sum_probs=168.1
Q ss_pred HhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC----
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK---- 242 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~---- 242 (468)
..++|.+.+.||+|+||.||++.. .+|+.||+|++....... .....+.+|+.+++.++||||+++++++....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 97 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQ-THAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE 97 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccch-hHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence 357899999999999999999975 468999999997543221 23456779999999999999999999986543
Q ss_pred --EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecc
Q 012219 243 --CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFG 320 (468)
Q Consensus 243 --~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 320 (468)
..++||||+++ +|...+.. .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||
T Consensus 98 ~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH---~~~ivHrDlkp~NIl~~~~~~~kl~Dfg 168 (359)
T cd07876 98 FQDVYLVMELMDA-NLCQVIHM-----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFG 168 (359)
T ss_pred cceeEEEEeCCCc-CHHHHHhc-----cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEecCC
Confidence 47999999975 56666542 2778888999999999999999 7899999999999999999999999999
Q ss_pred ccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcc
Q 012219 321 VARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELL 378 (468)
Q Consensus 321 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~ 378 (468)
+++.... ........||+.|+|||++.+..++.++|||||||++|||+||+.||...
T Consensus 169 ~a~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~ 225 (359)
T cd07876 169 LARTACT-NFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 225 (359)
T ss_pred Ccccccc-CccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 9976432 22233456899999999999999999999999999999999999999754
No 191
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=4.6e-39 Score=303.88 Aligned_cols=249 Identities=31% Similarity=0.456 Sum_probs=202.0
Q ss_pred CccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
+|++.+.||.|++|.||+|... +++.||+|.+...... .....+.+|+++++.++|+|++++++++......++|+|
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAE--DEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIME 79 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccc--hHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEE
Confidence 5778889999999999999754 6889999998765422 234678899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|+++++|.+++... .+++..+..++.|++.|+.||| +.+++|+||+|+||++++++.++|+|||+++......
T Consensus 80 ~~~~~~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 152 (274)
T cd06609 80 YCGGGSCLDLLKPG----KLDETYIAFILREVLLGLEYLH---EEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM 152 (274)
T ss_pred eeCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEcccccceeecccc
Confidence 99999999998754 4899999999999999999999 7899999999999999999999999999998876443
Q ss_pred CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHH
Q 012219 330 SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQ 409 (468)
Q Consensus 330 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (468)
.......++..|+|||++.+..++.++||||||+++|+|+||+.||.......... .......+..... . .
T Consensus 153 ~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~----~~~~~~~~~~~~~--~-~-- 223 (274)
T cd06609 153 SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLF----LIPKNNPPSLEGN--K-F-- 223 (274)
T ss_pred cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHH----HhhhcCCCCCccc--c-c--
Confidence 33444568889999999998889999999999999999999999987543211110 0111111111111 0 1
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 410 DIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 410 ~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
...+.+++.+||..+|++|||+++++++
T Consensus 224 -~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 224 -SKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred -CHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 1126678999999999999999999854
No 192
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=5.8e-39 Score=300.98 Aligned_cols=253 Identities=29% Similarity=0.443 Sum_probs=202.2
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|++.+.||+|+||.||+|.. .+++.+++|.+...... ..+.+.+|++++++++||||+++++++......+++|
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~ 79 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD---DFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVM 79 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh---hHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEE
Confidence 5788899999999999999975 46788999999765433 3567889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++++|.+++.... ..+++.++..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++......
T Consensus 80 e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 154 (262)
T cd06613 80 EYCGGGSLQDIYQVTR--GPLSELQIAYVCRETLKGLAYLH---ETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTAT 154 (262)
T ss_pred eCCCCCcHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHH---hCCceecCCChhhEEECCCCCEEECccccchhhhhh
Confidence 9999999999987642 24889999999999999999999 779999999999999999999999999999766433
Q ss_pred CCCceeccccccccccccccCC---CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccch
Q 012219 329 SSNRTLLAGTYGYIAPELAYTM---VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQ 405 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~---~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (468)
........++..|+|||..... .++.++||||||+++|||+||+.||............ .......+....
T Consensus 155 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~--~~~~~~~~~~~~---- 228 (262)
T cd06613 155 IAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLI--SKSNFPPPKLKD---- 228 (262)
T ss_pred hhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH--HhccCCCccccc----
Confidence 3233345688899999998776 8899999999999999999999998754322111110 000000111110
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 406 KIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 406 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
.......+.+++.+||..+|.+|||+.+++.
T Consensus 229 -~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 229 -KEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred -hhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1112234778999999999999999999875
No 193
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=8.9e-39 Score=300.39 Aligned_cols=252 Identities=26% Similarity=0.386 Sum_probs=200.0
Q ss_pred CccccceeeeeCCceEEEEEcCCCCEEEEEEecCcch---hhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSET---EELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
+|...+.||+|+||.||+|...+++.+|+|.+..... ......+.+.+|++++++++|+||+++++++.+.+..+++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 4677889999999999999888899999998875432 1223346788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
+||+++++|.+++.... .+++..+..++.|++.||+||| +.+++|+||+|+||+++.++.++|+|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 154 (265)
T cd06631 81 MEFVPGGSISSILNRFG---PLPEPVFCKYTKQILDGVAYLH---NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAW 154 (265)
T ss_pred EecCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHhEEECCCCeEEeccchhhHhhhh
Confidence 99999999999997543 3788999999999999999999 77999999999999999999999999999876532
Q ss_pred CC------CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 328 DS------SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 328 ~~------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
.. .......++..|+|||+..+..++.++||||||+++|+|++|+.||........... . .......+....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~-~-~~~~~~~~~~~~ 232 (265)
T cd06631 155 VGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFY-I-GAHRGLMPRLPD 232 (265)
T ss_pred ccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHH-h-hhccCCCCCCCC
Confidence 11 111234578899999999988899999999999999999999999975432211110 0 000011112222
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
... ..+.+++.+||+.+|++||++.+++.
T Consensus 233 ~~~-------~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 233 SFS-------AAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CCC-------HHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 111 12667999999999999999999875
No 194
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=4.5e-39 Score=305.80 Aligned_cols=262 Identities=24% Similarity=0.342 Sum_probs=198.5
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|+....||+|++|.||+|+.. +++.||+|++....... ...+.+.+|++++++++|+|++++++++......++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 79 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDP-VIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF 79 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCc-cccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence 36888899999999999999765 68999999986543211 22356789999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++++|..++.... .+++..++.++.|++.||+||| +.+++||||||+||+++.++.++|+|||++......
T Consensus 80 e~~~~~~l~~~~~~~~---~~~~~~~~~~~~ql~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07847 80 EYCDHTVLNELEKNPR---GVPEHLIKKIIWQTLQAVNFCH---KHNCIHRDVKPENILITKQGQIKLCDFGFARILTGP 153 (286)
T ss_pred eccCccHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCChhhEEEcCCCcEEECccccceecCCC
Confidence 9999988887765433 3899999999999999999999 789999999999999999999999999999876543
Q ss_pred CCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccc-----------------
Q 012219 329 SSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIK----------------- 390 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~----------------- 390 (468)
........++..|+|||++.+ ..++.++||||||+++|||++|+.||...............
T Consensus 154 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07847 154 GDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQF 233 (286)
T ss_pred cccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccc
Confidence 323334457889999998865 56788999999999999999999998754321110000000
Q ss_pred --cccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 391 --LIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 391 --~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.....++....+...........+.+++.+||+.+|++||++.+++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 234 FKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred cccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 000000000000000000111337789999999999999999998753
No 195
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=8.6e-39 Score=298.86 Aligned_cols=253 Identities=23% Similarity=0.340 Sum_probs=203.0
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
+|+..+.||+|+||.||.++. .+++.+++|.+....... ...+.+.+|++++++++|+||+++++++.+.+..+++||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e 79 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSE-KERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME 79 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccch-hHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence 477889999999999999964 568899999987554332 335678899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|+++|+|.+++.... ...+++.++..++.|++.|+.||| +.+++|+||+|+||+++.++.+||+|||++.......
T Consensus 80 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 80 YANGGTLYDKIVRQK-GQLFEEEMVLWYLFQIVSAVSYIH---KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred ecCCCcHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChHhEEEeCCCCEEECcCcceEEccccc
Confidence 999999999997653 234889999999999999999999 7799999999999999999999999999998765443
Q ss_pred CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHH
Q 012219 330 SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQ 409 (468)
Q Consensus 330 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (468)
.......+++.|+|||+..+..++.++||||||+++|||++|+.||........... .......... . .
T Consensus 156 ~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~-------~~~~~~~~~~-~---~ 224 (256)
T cd08221 156 SMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVK-------IVQGNYTPVV-S---V 224 (256)
T ss_pred ccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHH-------HHcCCCCCCc-c---c
Confidence 333445689999999999888889999999999999999999999875332111100 0011111110 1 1
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 410 DIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 410 ~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
....+.+++.+||+.+|++||++.++++.+
T Consensus 225 ~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 225 YSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred cCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 112266789999999999999999998764
No 196
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=7.3e-39 Score=303.86 Aligned_cols=251 Identities=26% Similarity=0.342 Sum_probs=196.6
Q ss_pred ccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEe
Q 012219 172 FHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEY 250 (468)
Q Consensus 172 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (468)
|++.+.||+|+||.||+|... ++..+++|.+...... ..+.+.+|+++++.++|+|++++++++...+..++|+||
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~ 83 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEE---ELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF 83 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHH---HHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEe
Confidence 567788999999999999765 5778899988654432 356788999999999999999999999999999999999
Q ss_pred ccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCC
Q 012219 251 MEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSS 330 (468)
Q Consensus 251 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 330 (468)
+++++|..++.... ..+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++........
T Consensus 84 ~~~~~l~~~~~~~~--~~l~~~~~~~~~~qi~~~L~~LH---~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~ 158 (282)
T cd06643 84 CAGGAVDAVMLELE--RPLTEPQIRVVCKQTLEALNYLH---ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ 158 (282)
T ss_pred cCCCcHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEccCCCEEEcccccccccccccc
Confidence 99999998876532 34899999999999999999999 78999999999999999999999999999876543333
Q ss_pred Cceecccccccccccccc-----CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccch
Q 012219 331 NRTLLAGTYGYIAPELAY-----TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQ 405 (468)
Q Consensus 331 ~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (468)
......++..|+|||++. ...++.++|||||||++|||++|+.||............ .....+.... ..
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~--~~ 232 (282)
T cd06643 159 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKI----AKSEPPTLAQ--PS 232 (282)
T ss_pred ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHH----hhcCCCCCCC--cc
Confidence 333456889999999874 345778999999999999999999998754322111110 0001111111 01
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 406 KIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 406 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
... ..+.+++.+||+.+|++||++.+++++-
T Consensus 233 ~~~---~~~~~li~~~l~~~p~~Rp~~~~il~~~ 263 (282)
T cd06643 233 RWS---SEFKDFLKKCLEKNVDARWTTTQLLQHP 263 (282)
T ss_pred ccC---HHHHHHHHHHccCChhhCcCHHHHhcCC
Confidence 111 2267899999999999999999988543
No 197
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.2e-38 Score=303.87 Aligned_cols=252 Identities=27% Similarity=0.402 Sum_probs=198.6
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
+.|++.+.||+|+||.||+|... +++.+++|.+...... ..+.+.+|+++++.++|+|++++++++..++..++||
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 88 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEE---ELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMI 88 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHH---HHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEE
Confidence 56888999999999999999764 5889999998765432 3567889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++++|..++.... ..+++..+..++.|++.|+.||| +.+++||||||+||+++.++.++|+|||++......
T Consensus 89 e~~~~~~l~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 163 (292)
T cd06644 89 EFCPGGAVDAIMLELD--RGLTEPQIQVICRQMLEALQYLH---SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT 163 (292)
T ss_pred ecCCCCcHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHh---cCCeeecCCCcceEEEcCCCCEEEccCccceecccc
Confidence 9999999988876533 23889999999999999999999 789999999999999999999999999998764333
Q ss_pred CCCceecccccccccccccc-----CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCcc
Q 012219 329 SSNRTLLAGTYGYIAPELAY-----TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPV 403 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (468)
........++..|+|||++. ...++.++|||||||++|||++|+.||........... ......+....+
T Consensus 164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~- 238 (292)
T cd06644 164 LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK----IAKSEPPTLSQP- 238 (292)
T ss_pred ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHH----HhcCCCccCCCC-
Confidence 33334456888999999885 34568899999999999999999999865432111110 011111111110
Q ss_pred chhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 404 DQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 404 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
... ...+.+++.+||+.+|++||++.+++++
T Consensus 239 -~~~---~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 239 -SKW---SMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred -ccc---CHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 011 1126678999999999999999999854
No 198
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7e-39 Score=308.74 Aligned_cols=260 Identities=24% Similarity=0.362 Sum_probs=202.0
Q ss_pred hhCccccceeeeeCCceEEEEEcC--------CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEe
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLP--------SGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCL 239 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 239 (468)
.++|.+.+.||+|+||.||++... ....+|+|.+...... .....+..|+++++++ +||||+++++++.
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATD--KDLADLISEMELMKLIGKHKNIINLLGVCT 88 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCCh--HHHHHHHHHHHHHHhccCCCCeeeEEEEEc
Confidence 467889999999999999999642 3457899998754332 2356788999999999 6999999999999
Q ss_pred eCCEEEEEEEeccCCChhhhhhcCcc-------------cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCce
Q 012219 240 HRKCMFLIYEYMEMGSLFCVLRTDEE-------------AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNV 306 (468)
Q Consensus 240 ~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NI 306 (468)
.....++++||+++|+|.+++..... ...+++.++..++.|++.||.||| +.+++||||||+||
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~gi~H~dlkp~Ni 165 (314)
T cd05099 89 QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE---SRRCIHRDLAARNV 165 (314)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeeccccceeE
Confidence 98999999999999999999965321 234889999999999999999999 78999999999999
Q ss_pred eeCCCCCeEEeeccccccccCCCCCc--eeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccch
Q 012219 307 LLNSELEAFVADFGVARLLNFDSSNR--TLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSW 383 (468)
Q Consensus 307 ll~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~ 383 (468)
+++.++.+||+|||+++......... ....++..|+|||++.+..++.++|||||||++|||++ |..||........
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~ 245 (314)
T cd05099 166 LVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEEL 245 (314)
T ss_pred EEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 99999999999999997654221111 11224467999999988889999999999999999999 8999865432111
Q ss_pred hhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCC
Q 012219 384 SLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNK 444 (468)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~ 444 (468)
... ............. ...+.+++.+||+.+|++|||+.++++.|.+...
T Consensus 246 ~~~----~~~~~~~~~~~~~-------~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~ 295 (314)
T cd05099 246 FKL----LREGHRMDKPSNC-------THELYMLMRECWHAVPTQRPTFKQLVEALDKVLA 295 (314)
T ss_pred HHH----HHcCCCCCCCCCC-------CHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 100 0000001111111 1126679999999999999999999999987754
No 199
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=4.7e-39 Score=305.77 Aligned_cols=263 Identities=25% Similarity=0.363 Sum_probs=201.7
Q ss_pred CHHHHHHHhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEE
Q 012219 161 TFQDMIEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFC 238 (468)
Q Consensus 161 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 238 (468)
.++.+..+.++|++.+.||+|+||.||++.. .+++.+|+|++...... ...+.+|+.++..+ +|+||+++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~----~~~~~~e~~~l~~l~~h~~i~~~~~~~ 84 (286)
T cd06638 9 IFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDI----DEEIEAEYNILKALSDHPNVVKFYGMY 84 (286)
T ss_pred EeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccch----HHHHHHHHHHHHHHhcCCCeeeeeeee
Confidence 3455556778999999999999999999965 46889999988653322 24677899999999 699999999988
Q ss_pred e-----eCCEEEEEEEeccCCChhhhhhcCc-ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC
Q 012219 239 L-----HRKCMFLIYEYMEMGSLFCVLRTDE-EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSEL 312 (468)
Q Consensus 239 ~-----~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~ 312 (468)
. ..+..++||||+++++|.+++.... ....+++..+..++.|++.||.||| +.+++||||||+||+++.++
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~nili~~~~ 161 (286)
T cd06638 85 YKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLH---VNKTIHRDVKGNNILLTTEG 161 (286)
T ss_pred eecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHH---hCCccccCCCHHhEEECCCC
Confidence 4 3456899999999999999876421 2234788999999999999999999 78999999999999999999
Q ss_pred CeEEeeccccccccCCCCCceeccccccccccccccC-----CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhc
Q 012219 313 EAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYT-----MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDK 387 (468)
Q Consensus 313 ~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~ 387 (468)
.++|+|||+++.............|+..|+|||++.. ..++.++|||||||++|||++|+.||...........
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~- 240 (286)
T cd06638 162 GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFK- 240 (286)
T ss_pred CEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhh-
Confidence 9999999999876543333344568999999998753 4578899999999999999999999875432111110
Q ss_pred ccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 388 NIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
......+....+ ... ...+.+++.+||+.||++|||+.+++++.
T Consensus 241 ---~~~~~~~~~~~~--~~~---~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 241 ---IPRNPPPTLHQP--ELW---SNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred ---ccccCCCcccCC--CCc---CHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 000011111100 000 11266799999999999999999998764
No 200
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.3e-38 Score=300.01 Aligned_cols=251 Identities=25% Similarity=0.340 Sum_probs=189.1
Q ss_pred eeeeeCCceEEEEEcCC---CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEeccC
Q 012219 177 CIGTGGYGSVYRARLPS---GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYMEM 253 (468)
Q Consensus 177 ~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 253 (468)
.||+|+||.||+|...+ +..+|+|.+...... .....|.+|+.++++++||||+++++++.+....++||||+++
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASV--QEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPL 79 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCCh--HHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCC
Confidence 58999999999997543 457999988765432 2335788999999999999999999999998889999999999
Q ss_pred CChhhhhhcCcc--cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCC-
Q 012219 254 GSLFCVLRTDEE--AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSS- 330 (468)
Q Consensus 254 gsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~- 330 (468)
|+|.+++..... ....++..+..++.|++.|+.||| +.+++|+||||+||+++.++.+||+|||+++.......
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~ 156 (269)
T cd05087 80 GDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH---KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYY 156 (269)
T ss_pred CcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCEeccccCcceEEEcCCCcEEECCccccccccCccee
Confidence 999999975332 234677788899999999999999 78999999999999999999999999999875432221
Q ss_pred -CceeccccccccccccccCC-------CCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhh-cccccccccCCCCC
Q 012219 331 -NRTLLAGTYGYIAPELAYTM-------VVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLD-KNIKLIDLLDPRLS 400 (468)
Q Consensus 331 -~~~~~~g~~~y~aPE~~~~~-------~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~ 400 (468)
......++..|+|||++... .++.++||||||+++|||++ |+.||........... .........++...
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (269)
T cd05087 157 VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLK 236 (269)
T ss_pred ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccC
Confidence 11223567889999988642 35789999999999999996 9999975433211111 00111111122222
Q ss_pred CccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 012219 401 PPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFI 440 (468)
Q Consensus 401 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~ 440 (468)
.... + .+.+++..|+ .+|++|||+++|...|.
T Consensus 237 ~~~~----~---~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 237 LPLS----D---RWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCC----h---HHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 1111 1 2556888898 68999999999998764
No 201
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3e-39 Score=297.91 Aligned_cols=255 Identities=21% Similarity=0.294 Sum_probs=208.6
Q ss_pred hCccccceeeeeCCceEEEEEcCC-CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPS-GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|++.+.||.|.-|+||.+++.+ +..+|+|++.+........+.....|-++|+.++||.+..+|+.+..++..|++|
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 467778899999999999998765 5899999999888776677788889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC-
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF- 327 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~- 327 (468)
|||+||+|....+++.. ..+++..+.-++..|.-||+||| -.|||.|||||+|||+.++|++.|+||.++.....
T Consensus 157 eyCpGGdL~~LrqkQp~-~~fse~~aRFYaAEvl~ALEYLH---mlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~ 232 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQKQPG-KRFSESAARFYAAEVLLALEYLH---MLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVS 232 (459)
T ss_pred ecCCCccHHHHHhhCCC-CccchhhHHHHHHHHHHHHHHHH---hhceeeccCCcceeEEecCCcEEeeeccccccCCCC
Confidence 99999999999887654 44899999999999999999999 88999999999999999999999999998744310
Q ss_pred --------------------------------C-C----------------------CCceeccccccccccccccCCCC
Q 012219 328 --------------------------------D-S----------------------SNRTLLAGTYGYIAPELAYTMVV 352 (468)
Q Consensus 328 --------------------------------~-~----------------------~~~~~~~g~~~y~aPE~~~~~~~ 352 (468)
. . .....++||-.|+|||++.+...
T Consensus 233 Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GH 312 (459)
T KOG0610|consen 233 PTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGH 312 (459)
T ss_pred CeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCC
Confidence 0 0 00112468999999999999999
Q ss_pred CccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCC-
Q 012219 353 TEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPT- 431 (468)
Q Consensus 353 ~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs- 431 (468)
+.++|.|+|||++|||+.|+.||.......- ...++...+.-+... .......+||.+.|.+||++|..
T Consensus 313 gsAVDWWtfGIflYEmLyG~TPFKG~~~~~T-------l~NIv~~~l~Fp~~~---~vs~~akDLIr~LLvKdP~kRlg~ 382 (459)
T KOG0610|consen 313 GSAVDWWTFGIFLYEMLYGTTPFKGSNNKET-------LRNIVGQPLKFPEEP---EVSSAAKDLIRKLLVKDPSKRLGS 382 (459)
T ss_pred CchhhHHHHHHHHHHHHhCCCCcCCCCchhh-------HHHHhcCCCcCCCCC---cchhHHHHHHHHHhccChhhhhcc
Confidence 9999999999999999999999986543221 112222222211111 12233778999999999999998
Q ss_pred ---HHHHHHH
Q 012219 432 ---MQLVSNE 438 (468)
Q Consensus 432 ---~~~v~~~ 438 (468)
+.||.++
T Consensus 383 ~rGA~eIK~H 392 (459)
T KOG0610|consen 383 KRGAAEIKRH 392 (459)
T ss_pred ccchHHhhcC
Confidence 8888854
No 202
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=7e-39 Score=301.99 Aligned_cols=250 Identities=26% Similarity=0.410 Sum_probs=191.9
Q ss_pred ceeeeeCCceEEEEEcCC-CC--EEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEEEEEEEec
Q 012219 176 YCIGTGGYGSVYRARLPS-GK--VVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCMFLIYEYM 251 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~~~-~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~ 251 (468)
+.||+|+||.||+|...+ +. .+++|.++..... ...+.+.+|++++.++ +||||+++++++...+..+++|||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~ 78 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASK--DDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 78 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCH--HHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeC
Confidence 358999999999998643 43 4688888743322 2345788999999999 7999999999999999999999999
Q ss_pred cCCChhhhhhcCc-------------ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEee
Q 012219 252 EMGSLFCVLRTDE-------------EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVAD 318 (468)
Q Consensus 252 ~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 318 (468)
++|+|.+++.... ....+++.+++.++.|++.||+||| +.+++||||||+||++++++.+||+|
T Consensus 79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nili~~~~~~kl~d 155 (270)
T cd05047 79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVAKIAD 155 (270)
T ss_pred CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccccceEEEcCCCeEEECC
Confidence 9999999987532 1224789999999999999999999 78999999999999999999999999
Q ss_pred ccccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCC
Q 012219 319 FGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDP 397 (468)
Q Consensus 319 fg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 397 (468)
||++...... ........+..|+|||++....++.++|||||||++|||++ |..||........... .......
T Consensus 156 fgl~~~~~~~-~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~----~~~~~~~ 230 (270)
T cd05047 156 FGLSRGQEVY-VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK----LPQGYRL 230 (270)
T ss_pred CCCccccchh-hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHH----HhCCCCC
Confidence 9998532211 11111223567999999988889999999999999999997 9999865432111100 0000000
Q ss_pred CCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 398 RLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 398 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
....... ..+.+++.+|++.+|.+|||+.+++..|.++
T Consensus 231 ~~~~~~~-------~~~~~li~~~l~~~p~~Rps~~~il~~l~~~ 268 (270)
T cd05047 231 EKPLNCD-------DEVYDLMRQCWREKPYERPSFAQILVSLNRM 268 (270)
T ss_pred CCCCcCC-------HHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence 1111111 1267899999999999999999999999765
No 203
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=8.6e-39 Score=300.79 Aligned_cols=250 Identities=26% Similarity=0.424 Sum_probs=199.1
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchh------hhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETE------ELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKC 243 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~------~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 243 (468)
+|.+...||+|++|.||+|.. .+++.+|+|.+...... .....+.+.+|++++++++||||+++++++.....
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 367788999999999999965 46889999988654322 12234678899999999999999999999999999
Q ss_pred EEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccc
Q 012219 244 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVAR 323 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~ 323 (468)
.++++||+++++|.+++.... .+++..+..++.|++.||+||| +.+++||||+|+||++++++.++|+|||.++
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~~l~~~l~~lH---~~~ivH~di~p~nil~~~~~~~~l~dfg~~~ 154 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYG---AFEETLVRNFVRQILKGLNYLH---NRGIIHRDIKGANILVDNKGGIKISDFGISK 154 (267)
T ss_pred cEEEEEecCCCCHHHHHHhcc---CccHHHHHHHHHHHHHHHHHHH---hcCcccccCCHHHEEEcCCCCEEecccCCCc
Confidence 999999999999999997643 3788899999999999999999 7799999999999999999999999999998
Q ss_pred cccCCCC------CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCC
Q 012219 324 LLNFDSS------NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDP 397 (468)
Q Consensus 324 ~~~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 397 (468)
....... ......|+..|+|||.+.+..++.++|||||||++|+|++|+.||.......... .......+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~----~~~~~~~~ 230 (267)
T cd06628 155 KLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIF----KIGENASP 230 (267)
T ss_pred ccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHH----HHhccCCC
Confidence 7642211 1122357889999999998889999999999999999999999997543221111 11111122
Q ss_pred CCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 398 RLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 398 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
....... ..+.+++.+||+.||++||++.++++
T Consensus 231 ~~~~~~~-------~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 231 EIPSNIS-------SEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred cCCcccC-------HHHHHHHHHHccCCchhCcCHHHHhh
Confidence 2222111 22667899999999999999999885
No 204
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=5.7e-39 Score=311.62 Aligned_cols=257 Identities=25% Similarity=0.299 Sum_probs=194.9
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|+||.||++... +++.+|+|++.............|.+|+.++..++|+||+++++++.+....++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 36888999999999999999764 57889999997544333334556889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++|+|.+++..... .+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||++......
T Consensus 81 ey~~~g~L~~~l~~~~~--~l~~~~~~~~~~qi~~al~~lH---~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~ 155 (332)
T cd05623 81 DYYVGGDLLTLLSKFED--RLPEDMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 155 (332)
T ss_pred eccCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCHHHEEECCCCCEEEeecchheecccC
Confidence 99999999999976332 3788899999999999999999 789999999999999999999999999998765332
Q ss_pred CCC-ceecccccccccccccc-----CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCc
Q 012219 329 SSN-RTLLAGTYGYIAPELAY-----TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPP 402 (468)
Q Consensus 329 ~~~-~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (468)
... .....||+.|+|||++. ...++.++|||||||++|||++|+.||........... ... ..........
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~-i~~--~~~~~~~p~~ 232 (332)
T cd05623 156 GTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGK-IMN--HKERFQFPAQ 232 (332)
T ss_pred CcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHH-HhC--CCccccCCCc
Confidence 222 22356999999999886 34678899999999999999999999975432111100 000 0000011111
Q ss_pred cchhHHHHHHHHHHHHHhcccCCCCC--CCCHHHHHHH
Q 012219 403 VDQKIRQDIILVSTVAFSCLRSQPKS--RPTMQLVSNE 438 (468)
Q Consensus 403 ~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~~v~~~ 438 (468)
.. .... .+.+++.+|+..++.+ ||++++++++
T Consensus 233 ~~-~~s~---~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 233 VT-DVSE---DAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred cc-cCCH---HHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 00 1111 2556777877554444 7899999866
No 205
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.2e-38 Score=301.51 Aligned_cols=250 Identities=28% Similarity=0.426 Sum_probs=201.6
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
.|+..+.||+|+||.||+|.. .++..||+|.+...... ...+.+.+|+.++++++|+||+++++++.+....++|||
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAE--DEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIME 82 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEe
Confidence 466778899999999999975 46889999998754432 235678899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|+++|+|.+++... .+++.+...++.|++.||+||| +.+++|+||+|+||+++.++.++++|||++.......
T Consensus 83 ~~~~~~L~~~i~~~----~l~~~~~~~~~~~l~~~l~~lh---~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06640 83 YLGGGSALDLLRAG----PFDEFQIATMLKEILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred cCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCccCcCCChhhEEEcCCCCEEEcccccceeccCCc
Confidence 99999999998643 3788899999999999999999 7899999999999999999999999999997764433
Q ss_pred CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHH
Q 012219 330 SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQ 409 (468)
Q Consensus 330 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (468)
.......++..|+|||++.+..++.++|||||||++|||+||+.||.......... .......+.... .
T Consensus 156 ~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~--------~~~~~~~~~~~~---~ 224 (277)
T cd06640 156 IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLF--------LIPKNNPPTLTG---E 224 (277)
T ss_pred cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhh--------hhhcCCCCCCch---h
Confidence 33334567889999999988889999999999999999999999987543211111 111111111111 1
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 012219 410 DIILVSTVAFSCLRSQPKSRPTMQLVSNEFI 440 (468)
Q Consensus 410 ~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~ 440 (468)
....+.+++.+||+.+|++||++.+++.+-.
T Consensus 225 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 255 (277)
T cd06640 225 FSKPFKEFIDACLNKDPSFRPTAKELLKHKF 255 (277)
T ss_pred hhHHHHHHHHHHcccCcccCcCHHHHHhChH
Confidence 2234778999999999999999999986543
No 206
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.1e-39 Score=311.36 Aligned_cols=262 Identities=23% Similarity=0.344 Sum_probs=203.3
Q ss_pred hhCccccceeeeeCCceEEEEEcC--------CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEe
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLP--------SGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCL 239 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~ 239 (468)
..+|.+.+.||+|+||.||+++.. .+..||+|.+...... ...+.+.+|++++.++ +|+||++++++|.
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATD--KDLSDLVSEMEMMKMIGKHKNIINLLGACT 88 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCH--HHHHHHHHHHHHHHhhcCCCCeeeeeEEEc
Confidence 356889999999999999999642 1236899988754322 2356788999999999 7999999999999
Q ss_pred eCCEEEEEEEeccCCChhhhhhcCc-------------ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCce
Q 012219 240 HRKCMFLIYEYMEMGSLFCVLRTDE-------------EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNV 306 (468)
Q Consensus 240 ~~~~~~lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NI 306 (468)
..+..++++||+++|+|.+++.... ....+++.+++.++.|++.||+||| +.+++||||||+||
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH---~~givH~dlkp~Ni 165 (334)
T cd05100 89 QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA---SQKCIHRDLAARNV 165 (334)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH---HCCeeccccccceE
Confidence 9999999999999999999987532 1234788999999999999999999 78999999999999
Q ss_pred eeCCCCCeEEeeccccccccCCCCCc--eeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccch
Q 012219 307 LLNSELEAFVADFGVARLLNFDSSNR--TLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSW 383 (468)
Q Consensus 307 ll~~~~~~kl~Dfg~~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~ 383 (468)
+++.++.+||+|||+++......... ....++..|+|||++.+..++.++||||||+++|||++ |..||........
T Consensus 166 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~ 245 (334)
T cd05100 166 LVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEEL 245 (334)
T ss_pred EEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHH
Confidence 99999999999999997654322111 11233567999999999999999999999999999998 8899865432221
Q ss_pred hhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCCC
Q 012219 384 SLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKAP 446 (468)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~~ 446 (468)
.... ............ ...+.+++.+||+.+|++||++.++++.|.++....
T Consensus 246 ~~~~----~~~~~~~~~~~~-------~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 246 FKLL----KEGHRMDKPANC-------THELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred HHHH----HcCCCCCCCCCC-------CHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 1110 000001111111 123678999999999999999999999999876443
No 207
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=7.8e-39 Score=305.87 Aligned_cols=253 Identities=25% Similarity=0.360 Sum_probs=202.1
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
.+|.+.+.||+|+||.||+|.. .+++.||+|.+...... ..+.+.+|+.+++.++|+|++++++++...+..++||
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~ 95 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP---KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 95 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccc---hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEee
Confidence 6788999999999999999975 57999999999754433 2356789999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++++|.+++... .+++.++..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++......
T Consensus 96 e~~~~~~L~~~~~~~----~~~~~~~~~~~~~l~~~L~~LH---~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~ 168 (297)
T cd06656 96 EYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALDFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 168 (297)
T ss_pred cccCCCCHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEECcCccceEccCC
Confidence 999999999998643 3788999999999999999999 789999999999999999999999999999776544
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
........+++.|+|||...+..++.++|||||||++|++++|+.||........... ....-.+.... ..
T Consensus 169 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~----~~~~~~~~~~~--~~--- 239 (297)
T cd06656 169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL----IATNGTPELQN--PE--- 239 (297)
T ss_pred ccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheee----eccCCCCCCCC--cc---
Confidence 3333445688899999999988899999999999999999999999864322111000 00000011110 01
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHH-HHHh
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPTMQLVSN-EFIA 441 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs~~~v~~-~l~~ 441 (468)
.....+.+++.+||+.+|++||++.++++ .|.+
T Consensus 240 ~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~ 273 (297)
T cd06656 240 RLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLK 273 (297)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhcCchhc
Confidence 11122667899999999999999999985 3443
No 208
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=1.1e-38 Score=299.89 Aligned_cols=258 Identities=28% Similarity=0.432 Sum_probs=204.2
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|++.+.||.|+||.||+|.. .++..+++|++....... ..+.+.+|++.++.++|+|++++++.+...+..++++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~ 78 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT--SVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVM 78 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch--HHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEE
Confidence 3688899999999999999974 468899999997554332 4577899999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
|++++++|.++++.......+++.....++.|++.||+||| +.+++|+||+|+||++++++.++|+|||++..+...
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh---~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~ 155 (267)
T cd06610 79 PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH---SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADG 155 (267)
T ss_pred eccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccC
Confidence 99999999999976443345899999999999999999999 789999999999999999999999999999776543
Q ss_pred CCC----ceeccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCcc
Q 012219 329 SSN----RTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPV 403 (468)
Q Consensus 329 ~~~----~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (468)
... .....++..|+|||++... .++.++|||||||++|||++|+.||............. ....+.+....
T Consensus 156 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~----~~~~~~~~~~~ 231 (267)
T cd06610 156 GDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTL----QNDPPSLETGA 231 (267)
T ss_pred ccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHh----cCCCCCcCCcc
Confidence 222 1334688899999998876 78999999999999999999999997554321111100 00111111111
Q ss_pred chhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 404 DQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 404 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
. .......+.+++.+|++.||++||++.+++.+
T Consensus 232 ~--~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 232 D--YKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred c--cccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 0 00111236789999999999999999999863
No 209
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-40 Score=314.46 Aligned_cols=256 Identities=27% Similarity=0.410 Sum_probs=205.8
Q ss_pred hhCccccceeeeeCCceEEEEEcC---CC--CEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLP---SG--KVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKC 243 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~---~~--~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 243 (468)
.+......+||+|.||.||+|.+. .| -.||||.-+.+...+ ..+.|..|..+|+.++||||++++|+|.+. .
T Consensus 388 Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d--~tekflqEa~iMrnfdHphIikLIGv~~e~-P 464 (974)
T KOG4257|consen 388 RELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPD--DTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-P 464 (974)
T ss_pred hhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChh--hHHHHHHHHHHHHhCCCcchhheeeeeecc-c
Confidence 344556678999999999999642 23 358899888766554 357899999999999999999999999875 5
Q ss_pred EEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccc
Q 012219 244 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVAR 323 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~ 323 (468)
.++|||.++.|.|..+|+.++.. ++......++.||+.||+||| +..+|||||.++|||+....-||++|||+++
T Consensus 465 ~WivmEL~~~GELr~yLq~nk~s--L~l~tL~ly~~Qi~talaYLe---SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR 539 (974)
T KOG4257|consen 465 MWIVMELAPLGELREYLQQNKDS--LPLRTLTLYCYQICTALAYLE---SKRFVHRDIAARNILVSSPQCVKLADFGLSR 539 (974)
T ss_pred eeEEEecccchhHHHHHHhcccc--chHHHHHHHHHHHHHHHHHHH---hhchhhhhhhhhheeecCcceeeecccchhh
Confidence 79999999999999999887654 788888999999999999999 8899999999999999999999999999999
Q ss_pred cccCCCCCcee-ccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 324 LLNFDSSNRTL-LAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 324 ~~~~~~~~~~~-~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
.+..+.+.... ..-+..|||||.+.-.+++.+||||-|||.+||++. |..||........ .-.+...-+.
T Consensus 540 ~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDV--------I~~iEnGeRl 611 (974)
T KOG4257|consen 540 YLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDV--------IGHIENGERL 611 (974)
T ss_pred hccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccce--------EEEecCCCCC
Confidence 98765554433 223568999999999999999999999999999997 9999986543211 1111111111
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
+.+. .+...++.++.+||..||.+||++.++...|..+.
T Consensus 612 P~P~---nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~ 650 (974)
T KOG4257|consen 612 PCPP---NCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVL 650 (974)
T ss_pred CCCC---CCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHH
Confidence 1111 22334778999999999999999999988776553
No 210
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=4.6e-39 Score=312.03 Aligned_cols=257 Identities=24% Similarity=0.307 Sum_probs=196.4
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|+||.||+++.. +++.||+|++.............+.+|..++..++|+||+++++++...+..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888999999999999999754 67889999997644333344566889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++|+|.+++..... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 Ey~~gg~L~~~l~~~~~--~l~~~~~~~~~~qi~~~L~~lH---~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 155 (331)
T cd05624 81 DYYVGGDLLTLLSKFED--RLPEDMARFYIAEMVLAIHSIH---QLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQD 155 (331)
T ss_pred eCCCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCchHHEEEcCCCCEEEEeccceeeccCC
Confidence 99999999999976332 3788899999999999999999 789999999999999999999999999999776433
Q ss_pred CCC-ceeccccccccccccccC-----CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCc
Q 012219 329 SSN-RTLLAGTYGYIAPELAYT-----MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPP 402 (468)
Q Consensus 329 ~~~-~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (468)
... .....|++.|+|||++.+ ..++.++|||||||++|||++|+.||......... ....... ....+...
T Consensus 156 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~-~~i~~~~--~~~~~p~~ 232 (331)
T cd05624 156 GTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETY-GKIMNHE--ERFQFPSH 232 (331)
T ss_pred CceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHH-HHHHcCC--CcccCCCc
Confidence 222 223569999999998875 46788999999999999999999999754321110 0000000 00011111
Q ss_pred cchhHHHHHHHHHHHHHhcccCCCCC--CCCHHHHHHH
Q 012219 403 VDQKIRQDIILVSTVAFSCLRSQPKS--RPTMQLVSNE 438 (468)
Q Consensus 403 ~~~~~~~~~~~l~~l~~~cl~~dP~~--RPs~~~v~~~ 438 (468)
... . ...+.+++.+|+..++.+ |+++++++++
T Consensus 233 ~~~-~---~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 233 ITD-V---SEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred ccc-C---CHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 110 1 122566888888765544 4688888754
No 211
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=2.9e-39 Score=305.82 Aligned_cols=248 Identities=29% Similarity=0.419 Sum_probs=198.8
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
.|+..+.||+|+||.||+|.. .++..||+|.+...... ...+.+.+|++++++++|+||+++++++......++|+|
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAE--DEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIME 82 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccch--HHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEE
Confidence 355667899999999999965 46788999998754433 234678899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|+++++|.+++... .+++..+..++.|++.|+.||| ..+++|+||+|+||++++++.++++|||++.......
T Consensus 83 ~~~~~~L~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH---~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06642 83 YLGGGSALDLLKPG----PLEETYIATILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred ccCCCcHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHh---cCCeeccCCChheEEEeCCCCEEEccccccccccCcc
Confidence 99999999988642 3789999999999999999999 7899999999999999999999999999997765333
Q ss_pred CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHH
Q 012219 330 SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQ 409 (468)
Q Consensus 330 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (468)
.......++..|+|||++.+..++.++|||||||++|||+||+.|+........... ......+.....
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~----~~~~~~~~~~~~------- 224 (277)
T cd06642 156 IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFL----IPKNSPPTLEGQ------- 224 (277)
T ss_pred hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhh----hhcCCCCCCCcc-------
Confidence 233334678899999999988899999999999999999999999864332111110 001111111111
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 410 DIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 410 ~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
....+.+++.+||+.+|++||++.+++++
T Consensus 225 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 225 YSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred cCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 11236789999999999999999999964
No 212
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=9e-39 Score=298.74 Aligned_cols=250 Identities=28% Similarity=0.463 Sum_probs=199.4
Q ss_pred hCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
.+|++.+.||+|+||.||++.+.++..+|+|.+...... ...|.+|++++++++|||++++++++......++++|
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMS----EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFE 79 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCC----HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEE
Confidence 467888999999999999998877889999998754432 3568899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|+++++|.+++..... .+++..+..++.+++.|++||| +.+++|+||||+||+++.++.++|+|||.++......
T Consensus 80 ~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 154 (256)
T cd05112 80 FMEHGCLSDYLRAQRG--KFSQETLLGMCLDVCEGMAYLE---SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ 154 (256)
T ss_pred cCCCCcHHHHHHhCcc--CCCHHHHHHHHHHHHHHHHHHH---HCCccccccccceEEEcCCCeEEECCCcceeecccCc
Confidence 9999999999875432 3788999999999999999999 7799999999999999999999999999987653221
Q ss_pred CC-ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 330 SN-RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 330 ~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
.. .....++..|+|||++.+..++.++||||||+++|||++ |+.||........... .........+...
T Consensus 155 ~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~------- 226 (256)
T cd05112 155 YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVET-INAGFRLYKPRLA------- 226 (256)
T ss_pred ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHH-HhCCCCCCCCCCC-------
Confidence 11 112234568999999998889999999999999999998 9999875332111110 0000111111111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
...+.+++.+||+.+|++|||+.++++.|
T Consensus 227 ---~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 227 ---SQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred ---CHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 12377899999999999999999999876
No 213
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=8.4e-39 Score=299.74 Aligned_cols=253 Identities=24% Similarity=0.402 Sum_probs=200.9
Q ss_pred hhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
.++|.+.+.||+|+||.||++...++..+|+|.+..... ..+.|.+|++++++++|+|++++.+++.. ...+++|
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~ 79 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 79 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCChh----HHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEE
Confidence 357889999999999999999987888899998875432 24578899999999999999999999887 6789999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++|+|.+++.... ...+++..++.++.|++.||.||| +.+++|+||||+||+++.++.+||+|||.+......
T Consensus 80 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 155 (260)
T cd05073 80 EFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN 155 (260)
T ss_pred EeCCCCcHHHHHHhCC-ccccCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCCcceeeccCC
Confidence 9999999999997643 234788999999999999999999 779999999999999999999999999999765422
Q ss_pred CC-CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchh
Q 012219 329 SS-NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQK 406 (468)
Q Consensus 329 ~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (468)
.. ......++..|+|||++....++.++|||||||++|+++| |+.||........... ............
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~---- 227 (260)
T cd05073 156 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA----LERGYRMPRPEN---- 227 (260)
T ss_pred CcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHH----HhCCCCCCCccc----
Confidence 21 1112335677999999988889999999999999999999 9999875432211100 000000001111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHh
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIA 441 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~ 441 (468)
....+.+++.+|++.+|++||++.++...|..
T Consensus 228 ---~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 228 ---CPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred ---CCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 11236789999999999999999999998864
No 214
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1e-38 Score=298.46 Aligned_cols=252 Identities=26% Similarity=0.372 Sum_probs=199.4
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee-CCEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH-RKCMFLIY 248 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~ 248 (468)
.|++.+.||+|++|.||++.. .+++.+|+|++....... ...+.+.+|++++++++|+|++++++.+.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASR-RERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM 79 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCH-HHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence 477889999999999999975 457899999987543322 234568899999999999999999998764 44679999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++++|.+++.... ...+++.+++.++.+++.|+++|| +.+++||||||+||+++.++.++|+|||++......
T Consensus 80 e~~~~~~l~~~l~~~~-~~~l~~~~~~~~~~~l~~~l~~lH---~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~ 155 (257)
T cd08223 80 GFCEGGDLYHKLKEQK-GKLLPENQVVEWFVQIAMALQYLH---EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ 155 (257)
T ss_pred cccCCCcHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCchhEEEecCCcEEEecccceEEeccc
Confidence 9999999999997543 234899999999999999999999 789999999999999999999999999999876543
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
........+++.|+|||+..+..++.++||||||+++++|++|+.||........... .....-+......+
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~---- 227 (257)
T cd08223 156 CDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYR----IIEGKLPPMPKDYS---- 227 (257)
T ss_pred CCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHH----HHhcCCCCCccccC----
Confidence 3333445688999999999999999999999999999999999999874332111100 00000011111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
..+.+++.+|++.+|++||++.+++++
T Consensus 228 ---~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 228 ---PELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred ---HHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 237789999999999999999999864
No 215
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=3.2e-39 Score=301.77 Aligned_cols=252 Identities=24% Similarity=0.359 Sum_probs=200.4
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
+|++.+.||+|+||.+|++.. .+|+.||+|.+....... ...+++.+|++++++++|+||+++++++...+..++|+|
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSP-KEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD 79 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCCh-HHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence 477889999999999999964 578999999987543222 234678899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|+++++|.+++..... ..+++.+++.++.|++.|+.||| +.+++|+||+|+||+++.++.++|+|||++.......
T Consensus 80 ~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 80 YCEGGDLYKKINAQRG-VLFPEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred cCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch
Confidence 9999999998875332 24788999999999999999999 7899999999999999999999999999997664333
Q ss_pred CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHH
Q 012219 330 SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQ 409 (468)
Q Consensus 330 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (468)
.......|++.|+|||+..+..++.++|||||||++++|++|+.||........... ......+......
T Consensus 156 ~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~----~~~~~~~~~~~~~------ 225 (256)
T cd08218 156 ELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLK----IIRGSYPPVSSHY------ 225 (256)
T ss_pred hhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHH----HhcCCCCCCcccC------
Confidence 333334578899999999988899999999999999999999999864322111000 0000001111111
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 410 DIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 410 ~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
...+.+++.+||+.+|++||++.+|+++
T Consensus 226 -~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 226 -SYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred -CHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 1226789999999999999999999864
No 216
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=5.5e-39 Score=305.63 Aligned_cols=261 Identities=26% Similarity=0.326 Sum_probs=190.6
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc---cCCceeeEEEEEee-----C
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQI---RHRNIVKLYGFCLH-----R 241 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~-----~ 241 (468)
+|.+.+.||+|+||.||+|.. .+++.||+|.+....... .....+.+|+++++.+ +||||+++++++.. .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~ 79 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNED-GLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE 79 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCC-CCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence 477889999999999999975 468899999987543221 1123455677766655 79999999998864 3
Q ss_pred CEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccc
Q 012219 242 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGV 321 (468)
Q Consensus 242 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 321 (468)
...++++||+. ++|.+++..... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+
T Consensus 80 ~~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dikp~Nili~~~~~~kl~dfg~ 154 (288)
T cd07863 80 TKVTLVFEHVD-QDLRTYLDKVPP-PGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGQVKLADFGL 154 (288)
T ss_pred ceEEEEEcccc-cCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccCc
Confidence 45799999997 488888865432 34889999999999999999999 78999999999999999999999999999
Q ss_pred cccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhc--------cccc--
Q 012219 322 ARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDK--------NIKL-- 391 (468)
Q Consensus 322 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~--------~~~~-- 391 (468)
++..... .......++..|+|||++.+..++.++||||+||++|||++|++||............ ....
T Consensus 155 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07863 155 ARIYSCQ-MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPR 233 (288)
T ss_pred cccccCc-ccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcc
Confidence 9876422 2223346789999999999889999999999999999999999998643321100000 0000
Q ss_pred -c----cccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 392 -I----DLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 392 -~----~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
. ....+................+.+++.+|++.||++|||+.+++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 234 DVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred cccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0 0000000000000001111236789999999999999999998853
No 217
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-41 Score=298.27 Aligned_cols=252 Identities=28% Similarity=0.424 Sum_probs=209.3
Q ss_pred ccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEe
Q 012219 172 FHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEY 250 (468)
Q Consensus 172 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (468)
|.+..+||+|+||+||++-+ .+|+.+|+|.+.-+. .+++...|+.+|++.+.+++|++||.+.....+++||||
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s-----DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEY 109 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT-----DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEY 109 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc-----hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhh
Confidence 66778899999999999954 579999999987543 357888999999999999999999999999999999999
Q ss_pred ccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCC
Q 012219 251 MEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSS 330 (468)
Q Consensus 251 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 330 (468)
|..|+..+.++.... ++.+.++..++...++||+||| ...-+|||||+.|||++.+|.+|++|||.|-.+...-.
T Consensus 110 CGAGSiSDI~R~R~K--~L~E~EIs~iL~~TLKGL~YLH---~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMA 184 (502)
T KOG0574|consen 110 CGAGSISDIMRARRK--PLSEQEISAVLRDTLKGLQYLH---DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMA 184 (502)
T ss_pred cCCCcHHHHHHHhcC--CccHHHHHHHHHHHHhHHHHHH---HHHHHHhhcccccEEEcccchhhhhhccccchhhhhHH
Confidence 999999999986543 4899999999999999999999 66789999999999999999999999999987765444
Q ss_pred CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHH
Q 012219 331 NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQD 410 (468)
Q Consensus 331 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (468)
......||+.|||||++..-.|+.++||||+|+...||..|++||.++...+..+. +.....|.+..+ . .-
T Consensus 185 KRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFM----IPT~PPPTF~KP--E---~W 255 (502)
T KOG0574|consen 185 KRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFM----IPTKPPPTFKKP--E---EW 255 (502)
T ss_pred hhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEe----ccCCCCCCCCCh--H---hh
Confidence 55667899999999999999999999999999999999999999987654332221 111112222221 1 22
Q ss_pred HHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 411 IILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 411 ~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
...+.+++.+|+-+.|++|-|+.+++++-+-.
T Consensus 256 S~~F~DFi~~CLiK~PE~R~TA~~L~~H~Fik 287 (502)
T KOG0574|consen 256 SSEFNDFIRSCLIKKPEERKTALRLCEHTFIK 287 (502)
T ss_pred hhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhc
Confidence 23478899999999999999998888765543
No 218
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=9.6e-39 Score=300.88 Aligned_cols=255 Identities=28% Similarity=0.425 Sum_probs=199.1
Q ss_pred hCccccceeeeeCCceEEEEEcCC-C---CEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPS-G---KVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMF 245 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 245 (468)
.+|.+.+.||+|+||.||+|.... + ..||+|.+...... ...+.|..|+.+++.++||||+++++++......+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 81 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTE--KQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVM 81 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCH--HHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceE
Confidence 357888999999999999997642 3 36999998764322 23568999999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccc
Q 012219 246 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLL 325 (468)
Q Consensus 246 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 325 (468)
+|+||+++|+|.+++.... ..+++.+++.++.|++.||+||| +.+++|+||||+||+++.++.++++|||+++..
T Consensus 82 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~i~~~l~~al~~lH---~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~ 156 (269)
T cd05065 82 IITEFMENGALDSFLRQND--GQFTVIQLVGMLRGIAAGMKYLS---EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFL 156 (269)
T ss_pred EEEecCCCCcHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccChheEEEcCCCcEEECCCcccccc
Confidence 9999999999999987643 24889999999999999999999 789999999999999999999999999998765
Q ss_pred cCCCCCc---eecc--ccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCC
Q 012219 326 NFDSSNR---TLLA--GTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRL 399 (468)
Q Consensus 326 ~~~~~~~---~~~~--g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (468)
....... .... .+..|+|||++....++.++|||||||++||+++ |..||.......... ..........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~----~i~~~~~~~~ 232 (269)
T cd05065 157 EDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIN----AIEQDYRLPP 232 (269)
T ss_pred ccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHH----HHHcCCcCCC
Confidence 4322111 1111 2357999999998899999999999999999987 999986543221110 0001111011
Q ss_pred CCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 400 SPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 400 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
.... ...+.+++.+||+.+|.+||++++++..|.+.
T Consensus 233 ~~~~-------~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 233 PMDC-------PTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred cccC-------CHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1111 12366799999999999999999999988753
No 219
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=1e-38 Score=306.73 Aligned_cols=260 Identities=23% Similarity=0.289 Sum_probs=199.0
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|++.+.||+|+||.||++.. .++..+|+|.+...... .....+.+|++++.+++||||+++++++..++..++|+
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 78 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKP--AIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICM 78 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCH--HHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEe
Confidence 3688899999999999999975 46788999988754322 23456889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++++|.+++.... .+++..+..++.|+++||.|||+ ..+++|+||||+||+++.++.++|+|||++......
T Consensus 79 ey~~~~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (308)
T cd06615 79 EHMDGGSLDQVLKKAG---RIPENILGKISIAVLRGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 153 (308)
T ss_pred eccCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHh--hCCEEECCCChHHEEEecCCcEEEccCCCccccccc
Confidence 9999999999997643 37889999999999999999994 258999999999999999999999999998765321
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCC-----------
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDP----------- 397 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~----------- 397 (468)
......++..|+|||+..+..++.++||||||+++|||++|+.||.....................+
T Consensus 154 --~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (308)
T cd06615 154 --MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPP 231 (308)
T ss_pred --ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCC
Confidence 2233568899999999988889999999999999999999999986432111100000000000000
Q ss_pred -----------------CCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 012219 398 -----------------RLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFI 440 (468)
Q Consensus 398 -----------------~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~ 440 (468)
...+..... .....+.+++.+||..+|++|||+.+++++-.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~ 289 (308)
T cd06615 232 DSPRPMAIFELLDYIVNEPPPKLPSG--AFSDEFQDFVDKCLKKNPKERADLKELTKHPF 289 (308)
T ss_pred CccchhhHHHHHHHHhcCCCccCcCc--ccCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 000000000 01123778999999999999999999996643
No 220
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=9.7e-39 Score=303.64 Aligned_cols=255 Identities=24% Similarity=0.358 Sum_probs=198.9
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|++.+.||+|+||.||++... +++.||+|.+...... .....+.+|++++++++|+||+++++++...+..++|+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 78 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDE--SKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCM 78 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCH--HHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEE
Confidence 35788899999999999999764 7899999988754322 23467889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++++|..++........+++..+..++.|++.||.|||+ +.+++|+||||+||+++.++.++|+|||++......
T Consensus 79 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 156 (286)
T cd06622 79 EYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE--EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS 156 (286)
T ss_pred eecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh--cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC
Confidence 999999999988764333458999999999999999999994 358999999999999999999999999998765322
Q ss_pred CCCceeccccccccccccccCC------CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCc
Q 012219 329 SSNRTLLAGTYGYIAPELAYTM------VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPP 402 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (468)
......++..|+|||.+.+. .++.++|||||||++|+|++|+.||......... ...........+.....
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~ 233 (286)
T cd06622 157 --LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIF-AQLSAIVDGDPPTLPSG 233 (286)
T ss_pred --ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHH-HHHHHHhhcCCCCCCcc
Confidence 22234578899999988554 3578999999999999999999998653321111 10001111111122221
Q ss_pred cchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 403 VDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 403 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
. ...+.+++.+|++.+|++||++++++++
T Consensus 234 ~-------~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 234 Y-------SDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred c-------CHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 1 1226679999999999999999999964
No 221
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2e-40 Score=302.28 Aligned_cols=260 Identities=25% Similarity=0.329 Sum_probs=192.3
Q ss_pred CccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC-----EE
Q 012219 171 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK-----CM 244 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~ 244 (468)
.|...+.+|.|+||.||+|... ++..||||+...+.... .+|+++|+.++|||||++.-++.... ..
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k-------nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~l 97 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK-------NRELQIMRKLDHPNIVRLLYFFSSSTESDEVYL 97 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC-------cHHHHHHHhcCCcCeeeEEEEEEecCCCchhHH
Confidence 4666789999999999999764 46899999987665432 27999999999999999988886532 24
Q ss_pred EEEEEeccCCChhhhhhcC-cccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC-CCeEEeecccc
Q 012219 245 FLIYEYMEMGSLFCVLRTD-EEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSE-LEAFVADFGVA 322 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~-~~~kl~Dfg~~ 322 (468)
.+|||||+. +|...++.. .....++...+.-+..||++||+||| +.+|+||||||+|+|+|.+ |.+||+|||.|
T Consensus 98 nlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh---~~~IcHRDIKPqNlLvD~~tg~LKicDFGSA 173 (364)
T KOG0658|consen 98 NLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLH---SHGICHRDIKPQNLLVDPDTGVLKICDFGSA 173 (364)
T ss_pred HHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHH---hcCcccCCCChheEEEcCCCCeEEeccCCcc
Confidence 589999986 898888742 12234777777889999999999999 7899999999999999988 99999999999
Q ss_pred ccccCCCCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhh--------------c
Q 012219 323 RLLNFDSSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLD--------------K 387 (468)
Q Consensus 323 ~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~--------------~ 387 (468)
+.+...... .....|..|+|||.+.+ ..|+.+.||||.||++.||+-|++-|...+....... .
T Consensus 174 K~L~~~epn-iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~ 252 (364)
T KOG0658|consen 174 KVLVKGEPN-ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKS 252 (364)
T ss_pred eeeccCCCc-eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhh
Confidence 998654444 55567899999998876 4799999999999999999999998875433211000 0
Q ss_pred -ccccccccCCCCCCccch--hHHHHHHHHHHHHHhcccCCCCCCCCHHHHH-HHHHhc
Q 012219 388 -NIKLIDLLDPRLSPPVDQ--KIRQDIILVSTVAFSCLRSQPKSRPTMQLVS-NEFIAR 442 (468)
Q Consensus 388 -~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~-~~l~~~ 442 (468)
.....+.-.+.+...... ..........+++.+++..+|.+|.++.|++ +.++..
T Consensus 253 mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFde 311 (364)
T KOG0658|consen 253 MNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDE 311 (364)
T ss_pred cCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHH
Confidence 000011111222211110 0011112367899999999999999997777 444443
No 222
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=2.6e-39 Score=324.60 Aligned_cols=258 Identities=20% Similarity=0.271 Sum_probs=188.1
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC------
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR------ 241 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 241 (468)
..+|.+.+.||+|+||.||+|.. .+++.||||++..... ...+|+.+++.++||||+++++++...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~-------~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~ 137 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQ-------YKNRELLIMKNLNHINIIFLKDYYYTECFKKNE 137 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcc-------hHHHHHHHHHhcCCCCCcceeeeEeecccccCC
Confidence 45799999999999999999975 4688999998864321 234799999999999999999876432
Q ss_pred --CEEEEEEEeccCCChhhhhhcC-cccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC-CeEEe
Q 012219 242 --KCMFLIYEYMEMGSLFCVLRTD-EEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSEL-EAFVA 317 (468)
Q Consensus 242 --~~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~-~~kl~ 317 (468)
...++||||+++ ++.+++... .....+++..+..++.||+.||+||| +.+|+||||||+|||++.++ .+||+
T Consensus 138 ~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH---~~~IiHrDLKp~NILl~~~~~~vkL~ 213 (440)
T PTZ00036 138 KNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH---SKFICHRDLKPQNLLIDPNTHTLKLC 213 (440)
T ss_pred CceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCcCHHHEEEcCCCCceeee
Confidence 246799999985 777666432 22345889999999999999999999 78999999999999999664 79999
Q ss_pred eccccccccCCCCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccc-------
Q 012219 318 DFGVARLLNFDSSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNI------- 389 (468)
Q Consensus 318 Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~------- 389 (468)
|||+++.+.... ......|++.|+|||++.+ ..++.++|||||||++|||+||++||..............
T Consensus 214 DFGla~~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~ 292 (440)
T PTZ00036 214 DFGSAKNLLAGQ-RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTE 292 (440)
T ss_pred ccccchhccCCC-CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 999998764322 2233568999999998765 4689999999999999999999999975432111000000
Q ss_pred -cc----ccccCCCCCCccchhHHH-----HHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 390 -KL----IDLLDPRLSPPVDQKIRQ-----DIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 390 -~~----~~~~~~~~~~~~~~~~~~-----~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.. ....+..+.......... ....+.+++.+||+.||.+|||+.+++++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 293 DQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred HHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 00 000000000000000000 11237789999999999999999998843
No 223
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=8.9e-39 Score=309.75 Aligned_cols=201 Identities=19% Similarity=0.315 Sum_probs=165.8
Q ss_pred ccceeeee--CCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEe
Q 012219 174 IKYCIGTG--GYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEY 250 (468)
Q Consensus 174 ~~~~lg~G--~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (468)
+.+.||+| +|++||++.. .+|+.||+|++....... ...+.+.+|+++++.++||||+++++++..++..++|+||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 80 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTN-EMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF 80 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccH-HHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence 45679999 6889999965 578999999997654322 2345677899999999999999999999999999999999
Q ss_pred ccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCC
Q 012219 251 MEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSS 330 (468)
Q Consensus 251 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 330 (468)
+++|+|.+++..... ..+++..++.++.|++.||+||| +.+|+||||||+||+++.++.++++||+.+........
T Consensus 81 ~~~~~l~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH---~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 81 MAYGSAKDLICTHFM-DGMSELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred cCCCcHHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCChhhEEEecCCcEEEcccchhhccccccc
Confidence 999999999865432 23889999999999999999999 78999999999999999999999999986544321111
Q ss_pred -------CceeccccccccccccccC--CCCCccchhhHHHHHHHHHHhCCCCCCccc
Q 012219 331 -------NRTLLAGTYGYIAPELAYT--MVVTEKCDVYSFGVVALEVLMGKHPGELLS 379 (468)
Q Consensus 331 -------~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~ 379 (468)
......++..|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 214 (327)
T cd08227 157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMP 214 (327)
T ss_pred cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcc
Confidence 1112346778999999875 468899999999999999999999997543
No 224
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.7e-38 Score=300.84 Aligned_cols=257 Identities=26% Similarity=0.421 Sum_probs=201.5
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCC----EEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGK----VVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCM 244 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 244 (468)
.+|.+.+.||+|+||.||+|... +|. .+|+|.+...... .....+.+|+.++++++|+|+++++++|.. ...
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 83 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSP--KANKEILDEAYVMASVDHPHVVRLLGICLS-SQV 83 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCH--HHHHHHHHHHHHHHhCCCCCcceEEEEEec-Cce
Confidence 56888899999999999999753 232 5899988765432 234678899999999999999999999987 678
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
++|+||+++|+|.+++..... .+++..++.++.|++.||+||| +.+++|+||||+||+++.++.+||+|||+++.
T Consensus 84 ~~v~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~ 158 (279)
T cd05057 84 QLITQLMPLGCLLDYVRNHKD--NIGSQYLLNWCVQIAKGMSYLE---EKRLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (279)
T ss_pred EEEEecCCCCcHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHH---hCCEEecccCcceEEEcCCCeEEECCCccccc
Confidence 999999999999999976433 3889999999999999999999 78999999999999999999999999999987
Q ss_pred ccCCCCCcee--ccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 325 LNFDSSNRTL--LAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 325 ~~~~~~~~~~--~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
.......... ..++..|+|||......++.++||||||+++||+++ |+.||+........... .. .. ......
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~-~~-~~--~~~~~~ 234 (279)
T cd05057 159 LDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLL-EK-GE--RLPQPP 234 (279)
T ss_pred ccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH-hC-CC--CCCCCC
Confidence 6432221111 123567999999988889999999999999999999 99998764432111100 00 00 000111
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
... ..+.+++.+||..+|++||++.++++.|.+..+.
T Consensus 235 ~~~-------~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 235 ICT-------IDVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred CCC-------HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 111 1266789999999999999999999999987543
No 225
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.8e-38 Score=301.52 Aligned_cols=263 Identities=25% Similarity=0.362 Sum_probs=199.0
Q ss_pred hCccccceeeeeCCceEEEEEc-----CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC--C
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-----PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR--K 242 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~ 242 (468)
..|.+.+.||+|+||.||.+.. .++..||+|.++..... .....+.+|++++++++|||++++.+++... .
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGG--NHIADLKKEIEILRNLYHENIVKYKGICTEDGGN 81 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccH--HHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCC
Confidence 3467888999999999999963 35788999998755432 2346789999999999999999999998875 5
Q ss_pred EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccc
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVA 322 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~ 322 (468)
..++||||+++++|.+++..... .+++..++.++.|++.||+||| +.+++||||||+||+++.++.++|+|||++
T Consensus 82 ~~~lv~e~~~g~~L~~~l~~~~~--~~~~~~~~~i~~~i~~aL~~lH---~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~ 156 (284)
T cd05079 82 GIKLIMEFLPSGSLKEYLPRNKN--KINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLT 156 (284)
T ss_pred ceEEEEEccCCCCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeecccchheEEEcCCCCEEECCCccc
Confidence 68999999999999999865432 4799999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCC---ceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhh----cc---cccc
Q 012219 323 RLLNFDSSN---RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLD----KN---IKLI 392 (468)
Q Consensus 323 ~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~----~~---~~~~ 392 (468)
+........ .....++..|+|||+..+..++.++||||||+++|||+|++.|............ .. ....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05079 157 KAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLV 236 (284)
T ss_pred cccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHH
Confidence 876432221 1223466789999999888899999999999999999998876432111000000 00 0000
Q ss_pred cccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 393 DLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
..+......+.... ....+.+++.+|++.+|++|||+.++++.++++
T Consensus 237 ~~~~~~~~~~~~~~---~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 237 RVLEEGKRLPRPPN---CPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHcCccCCCCCC---CCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 00000000000011 112377899999999999999999999999764
No 226
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.2e-39 Score=306.61 Aligned_cols=255 Identities=27% Similarity=0.377 Sum_probs=200.7
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|++.+.||+|+||+||++.. .+++.+|+|++...... ...+.+.+|+++++.++||||+++++++......++|+
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKS--SVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCM 82 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcc--hHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEE
Confidence 5678889999999999999975 46889999988754332 23467889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++++|.+++...+ .+++.....++.+++.||.|||+ ..+++||||+|+||+++.++.++|+|||++......
T Consensus 83 e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH~--~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~ 157 (284)
T cd06620 83 EFMDCGSLDRIYKKGG---PIPVEILGKIAVAVVEGLTYLYN--VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS 157 (284)
T ss_pred ecCCCCCHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHH--hcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence 9999999999887543 38899999999999999999994 358999999999999999999999999998654321
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcc----ccccccc---CCCCCC
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKN----IKLIDLL---DPRLSP 401 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~----~~~~~~~---~~~~~~ 401 (468)
......|+..|+|||++.+..++.++|||||||++|+++||+.||............. ....... .+.+..
T Consensus 158 --~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (284)
T cd06620 158 --IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPS 235 (284)
T ss_pred --ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCc
Confidence 1223468999999999988889999999999999999999999997543210000000 0001111 111111
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
. .....+.+++.+|++.||++|||+.+++++.
T Consensus 236 ~------~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 236 S------DFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred h------hcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 0 1112377899999999999999999999763
No 227
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=4.2e-39 Score=315.63 Aligned_cols=200 Identities=26% Similarity=0.322 Sum_probs=168.5
Q ss_pred HhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC-----
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR----- 241 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----- 241 (468)
..++|.+.+.||+|+||.||++.. ..++.||+|++....... ...+.+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQ-THAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccCh-HHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 457899999999999999999975 468899999997643322 2345677899999999999999999988643
Q ss_pred -CEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecc
Q 012219 242 -KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFG 320 (468)
Q Consensus 242 -~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 320 (468)
...++||||+++ ++.+.+.. .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH---~~givHrDikp~Nill~~~~~~kl~Dfg 164 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFG 164 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHhh-----cCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEECCCCCEEEeeCc
Confidence 347999999975 66666642 2788889999999999999999 7899999999999999999999999999
Q ss_pred ccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcc
Q 012219 321 VARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELL 378 (468)
Q Consensus 321 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~ 378 (468)
+++..... .......|+..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 165 ~~~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 221 (355)
T cd07874 165 LARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 221 (355)
T ss_pred ccccCCCc-cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 99765422 2223456899999999999989999999999999999999999998643
No 228
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.1e-38 Score=302.39 Aligned_cols=253 Identities=28% Similarity=0.425 Sum_probs=200.9
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.+.+.||+|+||.||+|.. .++..+|+|.+...... ..+.|.+|++++++++|+|++++++++..+...++|
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEE---ELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWIL 80 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHH---HHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Confidence 45688899999999999999976 46889999998755432 346788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|||+++++|.+++..... .+++..+..++.|++.||.||| +.+|+|+||+|+||+++.++.++|+|||++.....
T Consensus 81 ~e~~~~~~L~~~~~~~~~--~l~~~~~~~~~~ql~~~l~~lh---~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~ 155 (280)
T cd06611 81 IEFCDGGALDSIMLELER--GLTEPQIRYVCRQMLEALNFLH---SHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKS 155 (280)
T ss_pred eeccCCCcHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEECCCCCEEEccCccchhhcc
Confidence 999999999999875432 4889999999999999999999 78999999999999999999999999999876544
Q ss_pred CCCCceecccccccccccccc-----CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCc
Q 012219 328 DSSNRTLLAGTYGYIAPELAY-----TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPP 402 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (468)
.........++..|+|||++. ...++.++||||||+++|||++|+.||.......... .......+.+..
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~- 230 (280)
T cd06611 156 TLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLL----KILKSEPPTLDQ- 230 (280)
T ss_pred cccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHH----HHhcCCCCCcCC-
Confidence 333344456889999999874 3457789999999999999999999987543221111 011111111111
Q ss_pred cchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 403 VDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 403 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
..... ..+.+++.+||+.+|.+||++.+++++
T Consensus 231 -~~~~~---~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 231 -PSKWS---SSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred -cccCC---HHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 01111 126678999999999999999999854
No 229
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=9.2e-39 Score=303.29 Aligned_cols=263 Identities=25% Similarity=0.374 Sum_probs=203.1
Q ss_pred hCccccceeeeeCCceEEEEEcC-----CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee--CC
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-----SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH--RK 242 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~ 242 (468)
++|.+.+.||+|+||.||+|.+. ++..+|||++...... ...+.|.+|+++++.++|+||+++++++.. ..
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~ 81 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE--QHRSDFEREIEILRTLDHENIVKYKGVCEKPGGR 81 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch--HHHHHHHHHHHHHHhCCCCChheEEeeeecCCCC
Confidence 45777889999999999999753 4688999999866543 345689999999999999999999999887 55
Q ss_pred EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccc
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVA 322 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~ 322 (468)
..++++||+++++|.+++..... .+++..++.++.|++.||+||| +.+++|+||||+||+++.++.++|+|||.+
T Consensus 82 ~~~lv~e~~~~~~l~~~l~~~~~--~~~~~~~~~~~~~l~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 156 (284)
T cd05038 82 SLRLIMEYLPSGSLRDYLQRHRD--QINLKRLLLFSSQICKGMDYLG---SQRYIHRDLAARNILVESEDLVKISDFGLA 156 (284)
T ss_pred ceEEEEecCCCCCHHHHHHhCcc--ccCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHhEEEcCCCCEEEcccccc
Confidence 78999999999999999976543 4899999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCCce---eccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhh-------hcccccc
Q 012219 323 RLLNFDSSNRT---LLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSL-------DKNIKLI 392 (468)
Q Consensus 323 ~~~~~~~~~~~---~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~-------~~~~~~~ 392 (468)
........... ...++..|+|||...+..++.++||||||+++|||+||+.|+.......... .......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05038 157 KVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLL 236 (284)
T ss_pred cccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHH
Confidence 87652222111 1234567999999988899999999999999999999999976432211000 0000011
Q ss_pred cccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 393 DLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
+.+......+... .....+.+++.+||+.+|++|||+.+|+++|.++
T Consensus 237 ~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 237 ELLKEGERLPRPP---SCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHcCCcCCCCc---cCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 1111111111111 1113477899999999999999999999999875
No 230
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=2.2e-38 Score=297.16 Aligned_cols=239 Identities=24% Similarity=0.325 Sum_probs=185.5
Q ss_pred ceeeeeCCceEEEEEcCC-------------CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC
Q 012219 176 YCIGTGGYGSVYRARLPS-------------GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK 242 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 242 (468)
+.||+|+||.||+|.+.+ ...|++|++..... .....|.+|+.++..++||||+++++++....
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~---~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~ 77 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHR---DISLAFFETASMMRQVSHKHIVLLYGVCVRDV 77 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhh---hHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 358999999999997532 23588898765432 23457889999999999999999999999988
Q ss_pred EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCC-------eE
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELE-------AF 315 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~-------~k 315 (468)
..+++|||+++|+|..++.... ..+++..++.++.||+.||+||| +.+|+||||||+||+++.++. ++
T Consensus 78 ~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~~~~~~~~~ 152 (262)
T cd05077 78 ENIMVEEFVEFGPLDLFMHRKS--DVLTTPWKFKVAKQLASALSYLE---DKDLVHGNVCTKNILLAREGIDGECGPFIK 152 (262)
T ss_pred CCEEEEecccCCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHhh---hCCeECCCCCcccEEEecCCccCCCCceeE
Confidence 8999999999999998886543 23889999999999999999999 889999999999999987664 89
Q ss_pred EeeccccccccCCCCCceecccccccccccccc-CCCCCccchhhHHHHHHHHHH-hCCCCCCcccccchhhhccccccc
Q 012219 316 VADFGVARLLNFDSSNRTLLAGTYGYIAPELAY-TMVVTEKCDVYSFGVVALEVL-MGKHPGELLSSSSWSLDKNIKLID 393 (468)
Q Consensus 316 l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~s~Gvil~el~-tg~~p~~~~~~~~~~~~~~~~~~~ 393 (468)
++|||++..... .....++..|+|||++. +..++.++|||||||++|||+ +|+.|+........... ..
T Consensus 153 l~d~g~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~-----~~ 223 (262)
T cd05077 153 LSDPGIPITVLS----RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERF-----YE 223 (262)
T ss_pred eCCCCCCccccC----cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHH-----Hh
Confidence 999999865432 12245788899999886 467899999999999999998 58888764321111000 00
Q ss_pred ccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 394 LLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
. ......+. ...+.+++.+||+.||.+||++.++++.+
T Consensus 224 ~-~~~~~~~~-------~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 224 G-QCMLVTPS-------CKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred c-CccCCCCC-------hHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 0 00111111 12367899999999999999999999875
No 231
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=4.1e-39 Score=317.64 Aligned_cols=259 Identities=24% Similarity=0.262 Sum_probs=193.9
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC-----EE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK-----CM 244 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~ 244 (468)
+|++.+.||+|+||.||++.. .+++.||+|++...... ....+.+.+|+++++.++|+||+++++++.... ..
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 79 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQN-LVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEI 79 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccc-hHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceE
Confidence 477889999999999999975 57899999998654222 123467889999999999999999999998776 78
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
++|+||+. ++|.+.+.... .+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 80 ~lv~e~~~-~~l~~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~ 152 (372)
T cd07853 80 YVVTELMQ-SDLHKIIVSPQ---PLSSDHVKVFLYQILRGLKYLH---SAGILHRDIKPGNLLVNSNCVLKICDFGLARV 152 (372)
T ss_pred EEEeeccc-cCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChHHEEECCCCCEEeccccceee
Confidence 99999997 57887775433 3899999999999999999999 78999999999999999999999999999986
Q ss_pred ccCCC-CCceeccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccc-------------
Q 012219 325 LNFDS-SNRTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNI------------- 389 (468)
Q Consensus 325 ~~~~~-~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~------------- 389 (468)
..... .......++..|+|||++.+. .++.++|||||||++|||++|+.||......... ....
T Consensus 153 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~-~~i~~~~g~~~~~~~~~ 231 (372)
T cd07853 153 EEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQL-DLITDLLGTPSLEAMRS 231 (372)
T ss_pred cccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHH-HHHHHHcCCCCHHHHHH
Confidence 54322 122334578899999998764 5789999999999999999999999754321100 0000
Q ss_pred ---cccccc-CCCCCCccchh----HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 390 ---KLIDLL-DPRLSPPVDQK----IRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 390 ---~~~~~~-~~~~~~~~~~~----~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.....+ ......+.... .......+.+++.+|++.||++|||+.+++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 232 ACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred hhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 000000 00000000000 00001236789999999999999999999854
No 232
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.6e-38 Score=298.16 Aligned_cols=249 Identities=26% Similarity=0.366 Sum_probs=189.1
Q ss_pred ceeeeeCCceEEEEEcC----CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee-CCEEEEEEEe
Q 012219 176 YCIGTGGYGSVYRARLP----SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH-RKCMFLIYEY 250 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e~ 250 (468)
+.||+|+||.||+|... +...+|+|.+...... ...+.+.+|+.+++.++|||++++++++.. ++..++++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 78 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDL--EEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPY 78 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCH--HHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEec
Confidence 35899999999999753 2457999988643322 235678899999999999999999998764 5567899999
Q ss_pred ccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCC
Q 012219 251 MEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSS 330 (468)
Q Consensus 251 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 330 (468)
+.+|+|.+++..... ..++..++.++.|++.||+||| ..+++||||||+||++++++.+||+|||+++.......
T Consensus 79 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~ 153 (262)
T cd05058 79 MKHGDLRNFIRSETH--NPTVKDLIGFGLQVAKGMEYLA---SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY 153 (262)
T ss_pred CCCCCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHH---hCCccccccCcceEEEcCCCcEEECCccccccccCCcc
Confidence 999999999975432 2677888999999999999999 77999999999999999999999999999976532111
Q ss_pred ----CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhC-CCCCCcccccchhhhcccccccccCCCCCCccch
Q 012219 331 ----NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMG-KHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQ 405 (468)
Q Consensus 331 ----~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (468)
......++..|+|||+..+..++.++|||||||++|||++| .+||.......... .......+....
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~---- 225 (262)
T cd05058 154 YSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITV----YLLQGRRLLQPE---- 225 (262)
T ss_pred eeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHH----HHhcCCCCCCCC----
Confidence 11123456789999999888999999999999999999995 55665432211100 000000011111
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 406 KIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 406 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
.. ...+.+++.+||+.+|++||++.+++..|++.
T Consensus 226 ~~---~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~ 259 (262)
T cd05058 226 YC---PDPLYEVMLSCWHPKPEMRPTFSELVSRIEQI 259 (262)
T ss_pred cC---CHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 11 11367899999999999999999999999865
No 233
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1.2e-38 Score=303.88 Aligned_cols=262 Identities=26% Similarity=0.374 Sum_probs=201.6
Q ss_pred CHHHHHHHhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEE
Q 012219 161 TFQDMIEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFC 238 (468)
Q Consensus 161 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 238 (468)
+..++..++++|.+.+.||+|+||.||++.. .+++.+|+|++...... ...+.+|+.++.++ +|||++++++++
T Consensus 13 ~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~----~~~~~~e~~~l~~l~~h~ni~~~~~~~ 88 (291)
T cd06639 13 GLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDV----DEEIEAEYNILQSLPNHPNVVKFYGMF 88 (291)
T ss_pred hcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccH----HHHHHHHHHHHHHhcCCCCeEEEEEEE
Confidence 4455556678999999999999999999975 57889999998654322 24567899999998 899999999998
Q ss_pred eeC-----CEEEEEEEeccCCChhhhhhcCc-ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC
Q 012219 239 LHR-----KCMFLIYEYMEMGSLFCVLRTDE-EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSEL 312 (468)
Q Consensus 239 ~~~-----~~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~ 312 (468)
... +..++|+||+++|+|.++++... ....+++..++.++.|++.||.||| +.+++|+||||+||+++.++
T Consensus 89 ~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~dlkp~nili~~~~ 165 (291)
T cd06639 89 YKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLH---NNRIIHRDVKGNNILLTTEG 165 (291)
T ss_pred EeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCC
Confidence 753 35899999999999999886421 2234889999999999999999999 78999999999999999999
Q ss_pred CeEEeeccccccccCCCCCceeccccccccccccccCC-----CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhc
Q 012219 313 EAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTM-----VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDK 387 (468)
Q Consensus 313 ~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~ 387 (468)
.+||+|||++..............++..|+|||++... .++.++|||||||++|||++|+.||...........
T Consensus 166 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~- 244 (291)
T cd06639 166 GVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFK- 244 (291)
T ss_pred CEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHH-
Confidence 99999999998764333333345688899999987643 368899999999999999999999875432211111
Q ss_pred ccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 388 NIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
......+.+..+ . +....+.+++.+||+.+|++||++.+++++
T Consensus 245 ---~~~~~~~~~~~~--~---~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 245 ---IPRNPPPTLLHP--E---KWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred ---HhcCCCCCCCcc--c---ccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 000000111110 0 111237789999999999999999999864
No 234
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=7.3e-39 Score=306.80 Aligned_cols=260 Identities=20% Similarity=0.254 Sum_probs=195.7
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|+||.||+|+.. +++.||+|.+...... .....+.+|+++++.++|+||+++++++...+..++|+
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~ 83 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE--GAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 83 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc--CchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEE
Confidence 56889999999999999999754 6889999998754332 12345778999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||++ ++|.+++..... .+++..+..++.|++.||+||| +.+|+|+||||+||+++.++.++|+|||++......
T Consensus 84 e~~~-~~l~~~l~~~~~--~~~~~~~~~~~~qi~~aL~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 157 (301)
T cd07873 84 EYLD-KDLKQYLDDCGN--SINMHNVKLFLFQLLRGLNYCH---RRKVLHRDLKPQNLLINERGELKLADFGLARAKSIP 157 (301)
T ss_pred eccc-cCHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCC
Confidence 9997 589888865432 3788999999999999999999 789999999999999999999999999999765433
Q ss_pred CCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhh--c------cccccc------
Q 012219 329 SSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLD--K------NIKLID------ 393 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~--~------~~~~~~------ 393 (468)
........+++.|+|||.+.+ ..++.++|||||||++|||+||+.||........... . ......
T Consensus 158 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (301)
T cd07873 158 TKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE 237 (301)
T ss_pred CCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccc
Confidence 333334457889999998765 4578899999999999999999999875432110000 0 000000
Q ss_pred ccC---CCCCCccchhH-HHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 394 LLD---PRLSPPVDQKI-RQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 394 ~~~---~~~~~~~~~~~-~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
... +.......... ......+.+++.+|++.||.+|||++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 238 FKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred ccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 000 00000000000 000113678999999999999999999984
No 235
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-40 Score=315.27 Aligned_cols=255 Identities=28% Similarity=0.411 Sum_probs=208.7
Q ss_pred ccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEe
Q 012219 172 FHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEY 250 (468)
Q Consensus 172 ~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (468)
|.-...||.|+||.||-++ ..+...||||++.....+.....+++..|+..|.+++|||++.+.|+|....+.||||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 4445679999999999996 467889999999877766556667899999999999999999999999999999999999
Q ss_pred ccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCC
Q 012219 251 MEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSS 330 (468)
Q Consensus 251 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 330 (468)
|- ||-.|.+...++ ++.+.++..|..+.+.||+||| +.+.||||||+.|||+++.|.|||+|||.|....+
T Consensus 108 Cl-GSAsDlleVhkK--plqEvEIAAi~~gaL~gLaYLH---S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P--- 178 (948)
T KOG0577|consen 108 CL-GSASDLLEVHKK--PLQEVEIAAITHGALQGLAYLH---SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP--- 178 (948)
T ss_pred Hh-ccHHHHHHHHhc--cchHHHHHHHHHHHHHHHHHHH---HhhHHhhhccccceEecCCCeeeeccccchhhcCc---
Confidence 95 688888876554 4888899999999999999999 78999999999999999999999999999977643
Q ss_pred Cceecccccccccccccc---CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 331 NRTLLAGTYGYIAPELAY---TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 331 ~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
...++|||.|||||++. .+.|+-++||||+||+..||.-.++|+-.+....... .+.+.-.|.+.... +
T Consensus 179 -AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALY----HIAQNesPtLqs~e---W 250 (948)
T KOG0577|consen 179 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY----HIAQNESPTLQSNE---W 250 (948)
T ss_pred -hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHH----HHHhcCCCCCCCch---h
Confidence 34578999999999875 5689999999999999999999999965443322211 11122234444332 2
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCCC
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKAP 446 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~~ 446 (468)
.. .+.+++.+||++-|.+|||.++++.+-+-....|
T Consensus 251 S~---~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~Rp 286 (948)
T KOG0577|consen 251 SD---YFRNFVDSCLQKIPQERPTSEELLKHRFVLRERP 286 (948)
T ss_pred HH---HHHHHHHHHHhhCcccCCcHHHHhhcchhccCCC
Confidence 22 2778999999999999999999998877665543
No 236
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2.2e-38 Score=298.44 Aligned_cols=250 Identities=24% Similarity=0.312 Sum_probs=186.2
Q ss_pred eeeeeCCceEEEEEcCC---CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEeccC
Q 012219 177 CIGTGGYGSVYRARLPS---GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYMEM 253 (468)
Q Consensus 177 ~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 253 (468)
.||+|+||.||+|...+ ...+++|.+...... .....|.+|++.++.++|+||+++++++......++||||+++
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~ 79 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATP--DEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPL 79 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCCh--HHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCC
Confidence 58999999999996433 456888877654332 2346788999999999999999999999999999999999999
Q ss_pred CChhhhhhcCcc--cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCC
Q 012219 254 GSLFCVLRTDEE--AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSN 331 (468)
Q Consensus 254 gsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 331 (468)
|+|.+++..... ....++...+.++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++........
T Consensus 80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~ 156 (269)
T cd05042 80 GDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH---QADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYY 156 (269)
T ss_pred CcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHH---hcCEecccccHhheEecCCCcEEEeccccccccccchhe
Confidence 999999976432 223467788899999999999999 789999999999999999999999999998654322111
Q ss_pred --ceeccccccccccccccC-------CCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhc-ccccccccCCCCC
Q 012219 332 --RTLLAGTYGYIAPELAYT-------MVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDK-NIKLIDLLDPRLS 400 (468)
Q Consensus 332 --~~~~~g~~~y~aPE~~~~-------~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~ 400 (468)
.....++..|+|||+... ..++.++|||||||++|||++ |..||............ .........+...
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (269)
T cd05042 157 ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLD 236 (269)
T ss_pred eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCccc
Confidence 122345678999998643 356889999999999999999 88888654322111110 1111111122222
Q ss_pred CccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 401 PPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 401 ~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
.... ..+.+++..|+ .||++|||+++|++.|
T Consensus 237 ~~~~-------~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 237 LKYS-------DRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred ccCC-------HHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 2211 12445777888 5999999999999886
No 237
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-39 Score=284.59 Aligned_cols=255 Identities=24% Similarity=0.310 Sum_probs=202.0
Q ss_pred hhCccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchh-----hhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeC
Q 012219 169 TEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETE-----ELASLESFGNEARLLSQI-RHRNIVKLYGFCLHR 241 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~-----~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 241 (468)
-+.|.-.+.||.|..++|-++. ..+|+.+|+|++...... .....++-.+|+++++++ .||+|+.+.+++..+
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 3567778899999999998885 457889999988643221 122345667899999998 599999999999999
Q ss_pred CEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccc
Q 012219 242 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGV 321 (468)
Q Consensus 242 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 321 (468)
...++|+|.|+.|.|.++|... ..+++.+..+|+.|+..|++||| ...||||||||+|||+|++.++||+|||+
T Consensus 96 sF~FlVFdl~prGELFDyLts~---VtlSEK~tR~iMrqlfegVeylH---a~~IVHRDLKpENILlddn~~i~isDFGF 169 (411)
T KOG0599|consen 96 AFVFLVFDLMPRGELFDYLTSK---VTLSEKETRRIMRQLFEGVEYLH---ARNIVHRDLKPENILLDDNMNIKISDFGF 169 (411)
T ss_pred chhhhhhhhcccchHHHHhhhh---eeecHHHHHHHHHHHHHHHHHHH---HhhhhhcccChhheeeccccceEEeccce
Confidence 9999999999999999999754 34899999999999999999999 88999999999999999999999999999
Q ss_pred cccccCCCCCceecccccccccccccc------CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccccccccc
Q 012219 322 ARLLNFDSSNRTLLAGTYGYIAPELAY------TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLL 395 (468)
Q Consensus 322 ~~~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 395 (468)
++.+. .+......+||++|+|||.+. ...|+..+|+||.|||||-|+.|.+||...........-...-
T Consensus 170 a~~l~-~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGk---- 244 (411)
T KOG0599|consen 170 ACQLE-PGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGK---- 244 (411)
T ss_pred eeccC-CchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcc----
Confidence 99886 445566779999999999875 2368889999999999999999999986432211100000011
Q ss_pred CCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 396 DPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
-.+..+.+. +......+++.+|++.||.+|.|++|++.+
T Consensus 245 -yqF~speWa---dis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 245 -YQFRSPEWA---DISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred -cccCCcchh---hccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 112222222 222336679999999999999999888843
No 238
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.3e-38 Score=300.81 Aligned_cols=238 Identities=26% Similarity=0.349 Sum_probs=184.2
Q ss_pred eeeeeCCceEEEEEcC-------------------------CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCce
Q 012219 177 CIGTGGYGSVYRARLP-------------------------SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNI 231 (468)
Q Consensus 177 ~lg~G~~g~Vy~~~~~-------------------------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni 231 (468)
.||+|+||.||+|.+. ....|++|++..... .....|.+|+.+++.++||||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~---~~~~~~~~~~~~~~~l~h~ni 78 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR---DIALAFFETASLMSQVSHIHL 78 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH---HHHHHHHHHHHHHhcCCCCCe
Confidence 5999999999999642 123588998865432 234578899999999999999
Q ss_pred eeEEEEEeeCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC
Q 012219 232 VKLYGFCLHRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSE 311 (468)
Q Consensus 232 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~ 311 (468)
++++++|......++||||+++|+|..++..... .+++..++.++.||++||+||| +.+|+||||||+||+++.+
T Consensus 79 v~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~--~~~~~~~~~i~~qi~~~l~~lH---~~~iiH~dlkp~Nill~~~ 153 (274)
T cd05076 79 AFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKG--RVPVAWKITVAQQLASALSYLE---DKNLVHGNVCAKNILLARL 153 (274)
T ss_pred eeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHH---cCCccCCCCCcccEEEecc
Confidence 9999999999999999999999999999865332 4788999999999999999999 7899999999999999765
Q ss_pred C-------CeEEeeccccccccCCCCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHH-hCCCCCCcccccc
Q 012219 312 L-------EAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVL-MGKHPGELLSSSS 382 (468)
Q Consensus 312 ~-------~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~-tg~~p~~~~~~~~ 382 (468)
+ .+|++|||++...... ....++..|+|||.+.+ ..++.++|||||||++||++ +|+.||.......
T Consensus 154 ~~~~~~~~~~kl~d~g~~~~~~~~----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~ 229 (274)
T cd05076 154 GLAEGTSPFIKLSDPGVSFTALSR----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE 229 (274)
T ss_pred CcccCccceeeecCCccccccccc----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH
Confidence 3 3799999988643211 22356788999998865 56899999999999999995 6999986543211
Q ss_pred hhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 383 WSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
.... .. .......+.. ..+.+++.+||+.+|++|||+.++++.|
T Consensus 230 ~~~~-----~~-~~~~~~~~~~-------~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 230 KERF-----YE-KKHRLPEPSC-------KELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred HHHH-----HH-hccCCCCCCC-------hHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 1000 00 0011111111 1267799999999999999999999876
No 239
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=5.1e-39 Score=336.61 Aligned_cols=257 Identities=21% Similarity=0.326 Sum_probs=196.6
Q ss_pred HhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee--CCEE
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH--RKCM 244 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~ 244 (468)
..++|.+.+.||+|+||+||++.. .++..+|+|.+....... .....|..|+.++.+++|||||++++++.. ...+
T Consensus 11 ~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e-~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 11 RLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKE-REKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCH-HHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 456899999999999999999975 457789999887543322 234678899999999999999999998854 4568
Q ss_pred EEEEEeccCCChhhhhhcCc-ccCCCCHHHHHHHHHHHHHHHHHHHhcC----CCCeEecCCCCCceeeCCC--------
Q 012219 245 FLIYEYMEMGSLFCVLRTDE-EAVGLDWAKRVNVVKGMCHALSYLHHDC----TPPIVHRDISSNNVLLNSE-------- 311 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~----~~~ivH~dlk~~NIll~~~-------- 311 (468)
++||||+++|+|.+++.... ....+++..++.|+.||+.||.|||... ..+|+||||||+|||++.+
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~ 169 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT 169 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence 99999999999999987532 2235899999999999999999999532 1469999999999999642
Q ss_pred ---------CCeEEeeccccccccCCCCCceeccccccccccccccC--CCCCccchhhHHHHHHHHHHhCCCCCCcccc
Q 012219 312 ---------LEAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYT--MVVTEKCDVYSFGVVALEVLMGKHPGELLSS 380 (468)
Q Consensus 312 ---------~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~ 380 (468)
..+||+|||++..+.... ......||+.|+|||++.. ..++.++|||||||++|||+||+.||.....
T Consensus 170 ~~~~n~ng~~iVKLsDFGlAr~l~~~s-~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~ 248 (1021)
T PTZ00266 170 AQANNLNGRPIAKIGDFGLSKNIGIES-MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN 248 (1021)
T ss_pred ccccccCCCCceEEccCCccccccccc-cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence 358999999998764322 2234578999999998854 4588999999999999999999999975432
Q ss_pred cchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 381 SSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
........ ... +.+.. ... ...+.+++..||+.+|.+||++.+++.
T Consensus 249 ~~qli~~l---k~~--p~lpi--~~~----S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 249 FSQLISEL---KRG--PDLPI--KGK----SKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred HHHHHHHH---hcC--CCCCc--CCC----CHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 21111110 000 11111 000 122678999999999999999999984
No 240
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=2.8e-38 Score=297.26 Aligned_cols=251 Identities=24% Similarity=0.375 Sum_probs=194.2
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcch--hhhhhHHHHHHHHHHHhhccCCceeeEEEEEee--CCEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSET--EELASLESFGNEARLLSQIRHRNIVKLYGFCLH--RKCM 244 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~ 244 (468)
.+|...+.||+|+||.||+|.. .+++.|++|++..... ......+.+.+|+.++++++||||+++++++.. ....
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 3688899999999999999975 4689999998864421 122345678899999999999999999998875 3568
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
++++||+++++|.+++.... .+++...+.++.|++.||+||| +.+++||||+|+||+++.++.++|+|||+++.
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~LH---~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~ 155 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYG---ALTESVTRKYTRQILEGMSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCCCccc
Confidence 89999999999999997543 3788999999999999999999 78999999999999999999999999999876
Q ss_pred ccCCC---CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 325 LNFDS---SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 325 ~~~~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
..... .......++..|+|||++.+..++.++|||||||++|||++|+.||............ ......+.+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~---~~~~~~~~~~~ 232 (266)
T cd06651 156 LQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKI---ATQPTNPQLPS 232 (266)
T ss_pred cccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHH---hcCCCCCCCch
Confidence 53211 1122345788999999999888999999999999999999999999754322111110 01111122221
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
... +. +..++ +||..+|++||+++++++
T Consensus 233 ~~~----~~---~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 233 HIS----EH---ARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred hcC----HH---HHHHH-HHhcCChhhCcCHHHHhc
Confidence 111 21 33444 688899999999999975
No 241
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2.2e-38 Score=295.26 Aligned_cols=247 Identities=26% Similarity=0.390 Sum_probs=196.0
Q ss_pred ceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEeccCCC
Q 012219 176 YCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYMEMGS 255 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gs 255 (468)
+.||+|+||.||++...+++.||+|.+...... ...+.|.+|++++++++|+||+++++++......++|+||+++++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~ 78 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP--DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGS 78 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCc
Confidence 368999999999998777999999998765443 234678899999999999999999999999999999999999999
Q ss_pred hhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCc--e
Q 012219 256 LFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNR--T 333 (468)
Q Consensus 256 L~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~--~ 333 (468)
|.+++..... .+++..++.++.+++.||.||| +.+++||||+|+||+++.++.++|+|||+++......... .
T Consensus 79 l~~~l~~~~~--~~~~~~~~~~~~~~~~~l~~lH---~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~ 153 (251)
T cd05041 79 LLTFLRKKKN--RLTVKKLLQMSLDAAAGMEYLE---SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDG 153 (251)
T ss_pred HHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHH---hCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccc
Confidence 9999875432 3788999999999999999999 7799999999999999999999999999997653211111 1
Q ss_pred eccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHH
Q 012219 334 LLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDII 412 (468)
Q Consensus 334 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (468)
....+..|+|||.+.+..++.++||||||+++|||+| |..||........... +........... ...
T Consensus 154 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~--------~~~~~~~~~~~~---~~~ 222 (251)
T cd05041 154 LKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRER--------IESGYRMPAPQL---CPE 222 (251)
T ss_pred cCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHH--------HhcCCCCCCCcc---CCH
Confidence 1223567999999988889999999999999999999 8888865432111110 000000001111 112
Q ss_pred HHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 012219 413 LVSTVAFSCLRSQPKSRPTMQLVSNEFI 440 (468)
Q Consensus 413 ~l~~l~~~cl~~dP~~RPs~~~v~~~l~ 440 (468)
.+.+++.+|++.+|++||++.++++.|.
T Consensus 223 ~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 223 EIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 3778999999999999999999999875
No 242
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=2.2e-38 Score=299.35 Aligned_cols=256 Identities=23% Similarity=0.360 Sum_probs=201.1
Q ss_pred hCccccceeeeeCCceEEEEEcC------CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKC 243 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 243 (468)
++|.+...||+|+||.||+|+.. +.+.+++|.+...... ...+.|.+|++++++++|+||+++++++.....
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 82 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDE--NLQSEFRRELDMFRKLSHKNVVRLLGLCREAEP 82 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccch--HHHHHHHHHHHHHHhcCCcceeeeEEEECCCCc
Confidence 56888899999999999999753 3567999988754432 235678899999999999999999999999889
Q ss_pred EEEEEEeccCCChhhhhhcCccc------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEe
Q 012219 244 MFLIYEYMEMGSLFCVLRTDEEA------VGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVA 317 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~~~------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~ 317 (468)
.++||||+++|+|.+++...... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++++
T Consensus 83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~ 159 (275)
T cd05046 83 HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS---NARFVHRDLAARNCLVSSQREVKVS 159 (275)
T ss_pred ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh---hcCcccCcCccceEEEeCCCcEEEc
Confidence 99999999999999999765422 15899999999999999999999 7799999999999999999999999
Q ss_pred eccccccccCCC-CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhccccccccc
Q 012219 318 DFGVARLLNFDS-SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLL 395 (468)
Q Consensus 318 Dfg~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 395 (468)
|||++....... .......++..|+|||.+.+..++.++||||||+++|+|++ |..||................ .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~---~ 236 (275)
T cd05046 160 LLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGK---L 236 (275)
T ss_pred ccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCC---c
Confidence 999986543211 11222345678999999988888999999999999999999 888986543322111110000 0
Q ss_pred CCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 012219 396 DPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFI 440 (468)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~ 440 (468)
........+ ..+.+++.+||+.+|++|||+.+++..|.
T Consensus 237 ~~~~~~~~~-------~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 237 ELPVPEGCP-------SRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CCCCCCCCC-------HHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 001111111 13778999999999999999999998875
No 243
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2.9e-38 Score=296.42 Aligned_cols=256 Identities=24% Similarity=0.375 Sum_probs=202.0
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee--CCEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH--RKCMFLI 247 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv 247 (468)
+|++.+.||.|+||.||++.. .+++.+|+|.+....... ...+.+..|++++++++|+|++++++++.. ....+++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTE-KEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV 79 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCH-HHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence 477889999999999999964 578899999987544322 334678899999999999999999998764 4568999
Q ss_pred EEeccCCChhhhhhcCc-ccCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 248 YEYMEMGSLFCVLRTDE-EAVGLDWAKRVNVVKGMCHALSYLHHDC--TPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~--~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
+||+++++|.+++.... ....+++..++.++.|++.||.|||..+ +.+++|+||+|+||+++.++.+||+|||++..
T Consensus 80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~ 159 (265)
T cd08217 80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKI 159 (265)
T ss_pred ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccccc
Confidence 99999999999986532 2345899999999999999999999543 56899999999999999999999999999987
Q ss_pred ccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccc
Q 012219 325 LNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVD 404 (468)
Q Consensus 325 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (468)
............++..|+|||.+.+..++.++||||||+++|+|++|+.||......... . .......+.+...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~--~--~~~~~~~~~~~~~-- 233 (265)
T cd08217 160 LGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLA--S--KIKEGKFRRIPYR-- 233 (265)
T ss_pred ccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHH--H--HHhcCCCCCCccc--
Confidence 754443234456899999999999888999999999999999999999998754321111 0 0011111111111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 405 QKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 405 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
....+.+++.+|++.+|++||++.+|+++
T Consensus 234 -----~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 234 -----YSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred -----cCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 11236789999999999999999999864
No 244
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-39 Score=316.00 Aligned_cols=254 Identities=24% Similarity=0.437 Sum_probs=202.9
Q ss_pred ccccceeeeeCCceEEEEEcC--CCC--EEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 172 FHIKYCIGTGGYGSVYRARLP--SGK--VVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 172 ~~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
....+.||+|.||.|++|.|. +|+ .||||.+..+.... ...+|.+|+.+|.+|+|+|++++||+..+ ....+|
T Consensus 112 i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~--~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV 188 (1039)
T KOG0199|consen 112 IKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA--IMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMV 188 (1039)
T ss_pred HHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch--hHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHH
Confidence 344577999999999999763 454 58999998766542 57899999999999999999999999987 567899
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
+|.++.|||.+.|+. .....+-......++.|||.|+.||. ++++|||||.++|+++-....|||+|||+.+.+..
T Consensus 189 ~ELaplGSLldrLrk-a~~~~llv~~Lcdya~QiA~aM~YLe---skrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ 264 (1039)
T KOG0199|consen 189 FELAPLGSLLDRLRK-AKKAILLVSRLCDYAMQIAKAMQYLE---SKRLVHRDLAARNLLLASPRTVKICDFGLMRALGE 264 (1039)
T ss_pred hhhcccchHHHHHhh-ccccceeHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhhhheecccceeeeecccceeccCC
Confidence 999999999999998 33445788889999999999999999 88999999999999999999999999999998865
Q ss_pred CCCCcee---ccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCcc
Q 012219 328 DSSNRTL---LAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPV 403 (468)
Q Consensus 328 ~~~~~~~---~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (468)
....... ..-...|+|||.+....++.+||||+|||.+|||+| |..||-.... ..+.+.+|..-.-+-
T Consensus 265 ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g--------~qIL~~iD~~erLpR 336 (1039)
T KOG0199|consen 265 NEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG--------IQILKNIDAGERLPR 336 (1039)
T ss_pred CCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH--------HHHHHhccccccCCC
Confidence 4333322 122457999999999999999999999999999999 8889865432 122222332111111
Q ss_pred chhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 404 DQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 404 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
.....+. +++++..||...|++|||+.++.+.+....
T Consensus 337 Pk~csed---IY~imk~cWah~paDRptFsair~~~~l~e 373 (1039)
T KOG0199|consen 337 PKYCSED---IYQIMKNCWAHNPADRPTFSAIREDLVLAE 373 (1039)
T ss_pred CCCChHH---HHHHHHHhccCCccccccHHHHHHhHHHHh
Confidence 1222233 778999999999999999999986665443
No 245
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.1e-38 Score=313.71 Aligned_cols=200 Identities=26% Similarity=0.320 Sum_probs=168.4
Q ss_pred HhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC-----
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR----- 241 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----- 241 (468)
..++|.+.+.||+|+||.||++.. ..++.||||++...... ....+.+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~ 100 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQN-QTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE 100 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccC-chhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence 357899999999999999999975 46889999999754322 12345677999999999999999999987543
Q ss_pred -CEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecc
Q 012219 242 -KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFG 320 (468)
Q Consensus 242 -~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 320 (468)
...++||||+++ +|.+.+.. .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 101 ~~~~~lv~e~~~~-~l~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG 171 (364)
T cd07875 101 FQDVYIVMELMDA-NLCQVIQM-----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFG 171 (364)
T ss_pred cCeEEEEEeCCCC-CHHHHHHh-----cCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEECCCCcEEEEeCC
Confidence 357999999975 67776642 2788889999999999999999 7899999999999999999999999999
Q ss_pred ccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcc
Q 012219 321 VARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELL 378 (468)
Q Consensus 321 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~ 378 (468)
+++..... .......++..|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 172 ~a~~~~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 228 (364)
T cd07875 172 LARTAGTS-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228 (364)
T ss_pred CccccCCC-CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Confidence 99765422 2223456899999999999999999999999999999999999999643
No 246
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=2e-38 Score=300.81 Aligned_cols=259 Identities=24% Similarity=0.391 Sum_probs=200.7
Q ss_pred CHHHHHHHhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEE
Q 012219 161 TFQDMIEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFC 238 (468)
Q Consensus 161 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~ 238 (468)
++.++..+.+.|++.+.||+|+||.||+|.. .+++.+|+|.+..... ....+..|+.++.++ +|+|++++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~----~~~~~~~e~~~l~~~~~h~~i~~~~~~~ 82 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTED----EEEEIKLEINMLKKYSHHRNIATYYGAF 82 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChH----HHHHHHHHHHHHHHhcCCCcEEEEeeeh
Confidence 4556666778899999999999999999975 5688999999865432 235677899999998 699999999998
Q ss_pred ee------CCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC
Q 012219 239 LH------RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSEL 312 (468)
Q Consensus 239 ~~------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~ 312 (468)
.. ....+++|||+++|+|.+++..... ..+++..++.++.|++.|+.||| +.+++|+||+|+||+++.++
T Consensus 83 ~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~qi~~al~~LH---~~~ivH~dl~~~nili~~~~ 158 (282)
T cd06636 83 IKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKG-NALKEDWIAYICREILRGLAHLH---AHKVIHRDIKGQNVLLTENA 158 (282)
T ss_pred hcccccCCCCEEEEEEEeCCCCcHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCC
Confidence 53 4578999999999999999875432 34788888999999999999999 78999999999999999999
Q ss_pred CeEEeeccccccccCCCCCceecccccccccccccc-----CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhc
Q 012219 313 EAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAY-----TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDK 387 (468)
Q Consensus 313 ~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~ 387 (468)
.++|+|||++..............|+..|+|||.+. ...++.++|||||||++|||++|+.||..........
T Consensus 159 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~-- 236 (282)
T cd06636 159 EVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF-- 236 (282)
T ss_pred CEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh--
Confidence 999999999876543333334456889999999875 3467889999999999999999999986543211110
Q ss_pred ccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 388 NIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
.......+.... . .....+.+++.+||+.||.+|||+.++++
T Consensus 237 --~~~~~~~~~~~~---~---~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 237 --LIPRNPPPKLKS---K---KWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred --hHhhCCCCCCcc---c---ccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 000111111110 0 11123778999999999999999999875
No 247
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=3.6e-38 Score=296.93 Aligned_cols=257 Identities=26% Similarity=0.407 Sum_probs=199.6
Q ss_pred CccccceeeeeCCceEEEEEcCC--CCEEEEEEecCcch-------hhhhhHHHHHHHHHHHhh-ccCCceeeEEEEEee
Q 012219 171 DFHIKYCIGTGGYGSVYRARLPS--GKVVALKKLHRSET-------EELASLESFGNEARLLSQ-IRHRNIVKLYGFCLH 240 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~~-------~~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~ 240 (468)
+|++.+.||+|+||.||+|.... ++.+|+|.+..... ........+.+|+.++.+ ++|+||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 37778899999999999998654 78899998864321 112344567788888865 799999999999999
Q ss_pred CCEEEEEEEeccCCChhhhhhcC-cccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeec
Q 012219 241 RKCMFLIYEYMEMGSLFCVLRTD-EEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADF 319 (468)
Q Consensus 241 ~~~~~lv~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 319 (468)
.+..+++|||+++++|.+++... .....+++..++.++.|++.||.|||+ ..+++|+||+|+||+++.++.++|+||
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~--~~~i~H~dl~~~nil~~~~~~~~l~df 158 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK--EKRIVHRDLTPNNIMLGEDDKVTITDF 158 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc--CCceeecCCCHHHEEECCCCcEEEecc
Confidence 99999999999999999888542 223358899999999999999999993 358999999999999999999999999
Q ss_pred cccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCC
Q 012219 320 GVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRL 399 (468)
Q Consensus 320 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (468)
|.+....... ......++..|+|||...+..++.++||||||+++|||++|+.||........... ..+...
T Consensus 159 g~~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~-------~~~~~~ 230 (269)
T cd08528 159 GLAKQKQPES-KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATK-------IVEAVY 230 (269)
T ss_pred cceeeccccc-ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHH-------HhhccC
Confidence 9998754332 33445688899999999988899999999999999999999999864332111100 001111
Q ss_pred CCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 012219 400 SPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFI 440 (468)
Q Consensus 400 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~ 440 (468)
.+...... ...+.+++.+||+.||++||++.++..++.
T Consensus 231 ~~~~~~~~---~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 231 EPLPEGMY---SEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred CcCCcccC---CHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 11001001 123678999999999999999999998875
No 248
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.2e-38 Score=310.96 Aligned_cols=264 Identities=23% Similarity=0.292 Sum_probs=195.6
Q ss_pred HHhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC----
Q 012219 167 EATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR---- 241 (468)
Q Consensus 167 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~---- 241 (468)
...++|.+.+.||+|+||.||+|.. .+++.||||++....... ...+.+.+|++++++++|+||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSL-IHARRTYRELRLLKHMKHENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhh-HHHHHHHHHHHHHHhcCCCchhhhhhhhccccccc
Confidence 4457899999999999999999964 578899999997643322 2345677899999999999999999887542
Q ss_pred --CEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeec
Q 012219 242 --KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADF 319 (468)
Q Consensus 242 --~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 319 (468)
...++++|++ +++|.+++... .+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||+||
T Consensus 91 ~~~~~~~~~~~~-~~~l~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrdikp~Nil~~~~~~~kl~Df 162 (343)
T cd07878 91 NFNEVYLVTNLM-GADLNNIVKCQ----KLSDEHVQFLIYQLLRGLKYIH---SAGIIHRDLKPSNVAVNEDCELRILDF 162 (343)
T ss_pred ccCcEEEEeecC-CCCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeecccCChhhEEECCCCCEEEcCC
Confidence 3478999988 77898877532 3899999999999999999999 789999999999999999999999999
Q ss_pred cccccccCCCCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhc----cccccc-
Q 012219 320 GVARLLNFDSSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDK----NIKLID- 393 (468)
Q Consensus 320 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~----~~~~~~- 393 (468)
|+++.... ......|++.|+|||++.+ ..++.++|||||||++|+|++|+.||............ .....+
T Consensus 163 g~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 239 (343)
T cd07878 163 GLARQADD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEV 239 (343)
T ss_pred ccceecCC---CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 99986542 2233468999999999876 56889999999999999999999998643221000000 000000
Q ss_pred -----------ccC--CCCCCc-cchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH-HHhc
Q 012219 394 -----------LLD--PRLSPP-VDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE-FIAR 442 (468)
Q Consensus 394 -----------~~~--~~~~~~-~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~-l~~~ 442 (468)
... +..... ...........+.+++.+|++.||++|||+.+++++ +...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~ 303 (343)
T cd07878 240 LKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQ 303 (343)
T ss_pred HHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhc
Confidence 000 000000 000000001125689999999999999999999954 4433
No 249
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2.7e-38 Score=295.92 Aligned_cols=237 Identities=26% Similarity=0.401 Sum_probs=187.7
Q ss_pred ceeeeeCCceEEEEEcCCCC-----------EEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEE
Q 012219 176 YCIGTGGYGSVYRARLPSGK-----------VVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCM 244 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 244 (468)
+.||+|+||.||+|...+.. .+++|.+...... ...|.+|+.+++.++||||+++++++.. ...
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~ 75 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD----SLAFFETASLMSQLSHKHLVKLYGVCVR-DEN 75 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh----HHHHHHHHHHHHcCCCcchhheeeEEec-CCc
Confidence 35899999999999875433 5778877654322 4678899999999999999999999988 678
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC-------CeEEe
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSEL-------EAFVA 317 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~-------~~kl~ 317 (468)
++|+||+++|+|.+++..... .+++..++.++.||+.||+||| +.+|+||||||+||+++.++ .+||+
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~ 150 (259)
T cd05037 76 IMVEEYVKFGPLDVFLHREKN--NVSLHWKLDVAKQLASALHYLE---DKKLVHGNVCGKNILVARYGLNEGYVPFIKLS 150 (259)
T ss_pred EEEEEcCCCCcHHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHh---hCCeecccCccceEEEecCccccCCceeEEeC
Confidence 999999999999999976543 4889999999999999999999 78999999999999999888 79999
Q ss_pred eccccccccCCCCCceeccccccccccccccCC--CCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccc
Q 012219 318 DFGVARLLNFDSSNRTLLAGTYGYIAPELAYTM--VVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDL 394 (468)
Q Consensus 318 Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~ 394 (468)
|||++..... .....++..|+|||++... .++.++||||||+++|||++ |..|+............. .
T Consensus 151 Dfg~a~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~-----~ 221 (259)
T cd05037 151 DPGIPITVLS----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ-----D 221 (259)
T ss_pred CCCccccccc----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh-----c
Confidence 9999976542 2233467789999998876 78999999999999999999 577776543221111000 0
Q ss_pred cCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 395 LDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
......+.. ..+.+++.+||..+|.+|||+.++++.|
T Consensus 222 -~~~~~~~~~-------~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 222 -QHRLPMPDC-------AELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred -CCCCCCCCc-------hHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 001111111 2377899999999999999999999876
No 250
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=3.6e-38 Score=297.11 Aligned_cols=256 Identities=27% Similarity=0.378 Sum_probs=199.6
Q ss_pred hCccccceeeeeCCceEEEEEcCC----CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPS----GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMF 245 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 245 (468)
++|.+.+.||+|+||.||+|...+ ...|++|........ ...+.|.+|+.++++++||||+++++++... ..+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~--~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~~~ 82 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSP--SVREKFLQEAYIMRQFDHPHIVKLIGVITEN-PVW 82 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCH--HHHHHHHHHHHHHHhCCCCchhceeEEEcCC-CcE
Confidence 457888999999999999997533 346899988765432 2346788999999999999999999998764 468
Q ss_pred EEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccc
Q 012219 246 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLL 325 (468)
Q Consensus 246 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 325 (468)
+||||+++|+|.+++..... .+++..++.++.|++.||+||| +.+++||||||+||+++.++.++|+|||+++..
T Consensus 83 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~l~~~l~~lH---~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~ 157 (270)
T cd05056 83 IVMELAPLGELRSYLQVNKY--SLDLASLILYSYQLSTALAYLE---SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYL 157 (270)
T ss_pred EEEEcCCCCcHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHH---hCCeeccccChheEEEecCCCeEEccCceeeec
Confidence 99999999999999976432 4899999999999999999999 789999999999999999999999999999766
Q ss_pred cCCCCC-ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCcc
Q 012219 326 NFDSSN-RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPV 403 (468)
Q Consensus 326 ~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (468)
...... .....++..|+|||.+....++.++||||||+++||+++ |+.||........... .............
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~----~~~~~~~~~~~~~ 233 (270)
T cd05056 158 EDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGR----IENGERLPMPPNC 233 (270)
T ss_pred ccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHH----HHcCCcCCCCCCC
Confidence 433211 112234567999999988889999999999999999996 9999875543211110 0000001111111
Q ss_pred chhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCC
Q 012219 404 DQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNK 444 (468)
Q Consensus 404 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~ 444 (468)
...+.+++.+|+..+|++|||+.+++..|.+...
T Consensus 234 -------~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 234 -------PPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred -------CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 1237779999999999999999999999987543
No 251
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=5.9e-38 Score=296.83 Aligned_cols=248 Identities=29% Similarity=0.430 Sum_probs=199.5
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
-|...+.||+|+||.||+|.. .++..+|+|.+...... ...+.+.+|+..+.+++||||+++++++..+...++|+|
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 82 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE--DEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 82 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccch--HHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEE
Confidence 366778899999999999965 56889999998654432 234678899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|+++++|.+++... .+++..+..++.|++.|+.||| ..+++|+||+|+||+++.++.++|+|||++.......
T Consensus 83 ~~~~~~l~~~i~~~----~~~~~~~~~~~~~l~~~l~~lh---~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06641 83 YLGGGSALDLLEPG----PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ 155 (277)
T ss_pred eCCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHc---cCCeecCCCCHHhEEECCCCCEEEeecccceecccch
Confidence 99999999998643 3789999999999999999999 7899999999999999999999999999987664333
Q ss_pred CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHH
Q 012219 330 SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQ 409 (468)
Q Consensus 330 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (468)
.......++..|+|||.+.+..++.++|||||||++|+|++|..||........... ......+.+.....
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~----- 226 (277)
T cd06641 156 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFL----IPKNNPPTLEGNYS----- 226 (277)
T ss_pred hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHH----HhcCCCCCCCcccC-----
Confidence 233334678899999999888889999999999999999999999865332111110 00000111111111
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 410 DIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 410 ~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
..+.+++.+|++.+|++||++.+++.+
T Consensus 227 --~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 227 --KPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred --HHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 226678999999999999999999975
No 252
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=2.8e-38 Score=295.07 Aligned_cols=247 Identities=25% Similarity=0.423 Sum_probs=196.1
Q ss_pred hCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
++|.+.+.||+|+||.||++.. +++.+|+|.+..... .+.+.+|+.++.+++|||++++++++.... .+++||
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~~-----~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-~~~v~e 78 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDVT-----AQAFLEETAVMTKLHHKNLVRLLGVILHNG-LYIVME 78 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcch-----HHHHHHHHHHHHhCCCCCcCeEEEEEcCCC-cEEEEE
Confidence 4688899999999999999975 678899999875432 257889999999999999999999987654 789999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|+++++|.+++..... ..+++..++.++.|++.|+.||| +.+++||||||+||+++.++.++|+|||++......
T Consensus 79 ~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~qi~~al~~lH---~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~- 153 (254)
T cd05083 79 LMSKGNLVNFLRTRGR-ALVSVIQLLQFSLDVAEGMEYLE---SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG- 153 (254)
T ss_pred CCCCCCHHHHHHhcCc-CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccccCcceEEEcCCCcEEECCCccceecccc-
Confidence 9999999999976432 34789999999999999999999 789999999999999999999999999998754321
Q ss_pred CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 330 SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 330 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
......+..|+|||++.+..++.++||||||+++|||++ |+.||........... +...........
T Consensus 154 --~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~--------~~~~~~~~~~~~-- 221 (254)
T cd05083 154 --VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKEC--------VEKGYRMEPPEG-- 221 (254)
T ss_pred --CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHH--------HhCCCCCCCCCc--
Confidence 112234567999999988899999999999999999998 9999875433211110 000111100111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHh
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIA 441 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~ 441 (468)
....+.+++.+||+.+|++||+++++++.|++
T Consensus 222 -~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 222 -CPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred -CCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 11236689999999999999999999998864
No 253
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=5.9e-39 Score=305.03 Aligned_cols=262 Identities=25% Similarity=0.369 Sum_probs=198.0
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|++.+.||+|+||.||+|... +++.||+|++....... ...+.+.+|+++++.++||||+++++++...+..++|+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 79 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK-MVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVF 79 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc-hhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEE
Confidence 36788899999999999999864 58999999987544332 23457889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++++|..+..... .+++.+++.++.||+.||+||| +.+++|+||+|+||++++++.++|+|||++......
T Consensus 80 e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~i~~~l~~LH---~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07846 80 EFVDHTVLDDLEKYPN---GLDESRVRKYLFQILRGIEFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 153 (286)
T ss_pred ecCCccHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCC
Confidence 9999999888765432 3899999999999999999999 779999999999999999999999999999876443
Q ss_pred CCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhh----------cccc---cc--
Q 012219 329 SSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLD----------KNIK---LI-- 392 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~----------~~~~---~~-- 392 (468)
........++..|+|||++.+ ..++.++||||||+++|||++|+.||........... .... ..
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07846 154 GEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPL 233 (286)
T ss_pred ccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchH
Confidence 333334567889999998865 4578899999999999999999999864322100000 0000 00
Q ss_pred --cccCCCCCCc--cchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 393 --DLLDPRLSPP--VDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 393 --~~~~~~~~~~--~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
....+..... ...........+.+++.+||+.+|++||++.+++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 234 FAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred hhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 0000000000 000000112237789999999999999999998753
No 254
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=6.5e-38 Score=294.20 Aligned_cols=252 Identities=29% Similarity=0.414 Sum_probs=200.1
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
+|...+.||+|+||.||+|.. .+++.|++|.++..... ....+.+.+|++++++++|+||+++++++...+..++|+|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND-PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME 79 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc-hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence 477889999999999999975 47899999999866543 2356789999999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|+++++|.+++.... .+++..+..++.+++.|++||| +.+++|+||+|+||++++++.+||+|||++.......
T Consensus 80 ~~~~~~L~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~ 153 (264)
T cd06626 80 YCSGGTLEELLEHGR---ILDEHVIRVYTLQLLEGLAYLH---SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNT 153 (264)
T ss_pred cCCCCcHHHHHhhcC---CCChHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEcccccccccCCCC
Confidence 999999999987543 3788899999999999999999 7899999999999999999999999999998764332
Q ss_pred CCce----eccccccccccccccCCC---CCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCc
Q 012219 330 SNRT----LLAGTYGYIAPELAYTMV---VTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPP 402 (468)
Q Consensus 330 ~~~~----~~~g~~~y~aPE~~~~~~---~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (468)
.... ...++..|+|||++.... .+.++||||||+++||+++|+.||............ ......+.+...
T Consensus 154 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~---~~~~~~~~~~~~ 230 (264)
T cd06626 154 TTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFH---VGAGHKPPIPDS 230 (264)
T ss_pred CcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHH---HhcCCCCCCCcc
Confidence 2211 245788999999988766 889999999999999999999999754321111100 011111112111
Q ss_pred cchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 403 VDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 403 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
. .....+.+++.+||+.+|++||++.+++.
T Consensus 231 ~-----~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 231 L-----QLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred c-----ccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 1 00112567899999999999999999874
No 255
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=3.8e-38 Score=300.17 Aligned_cols=247 Identities=29% Similarity=0.388 Sum_probs=200.3
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|++.+.||+|+||.||++... +++.+|+|++...........+.+.+|++++++++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 36888999999999999999754 68999999997655443345577889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++++|.+++.... .+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~~---~l~~~~~~~~~~qil~~l~~lH---~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 154 (290)
T cd05580 81 EYVPGGELFSHLRKSG---RFPEPVARFYAAQVVLALEYLH---SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR 154 (290)
T ss_pred ecCCCCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC
Confidence 9999999999987653 3889999999999999999999 789999999999999999999999999999876433
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
.....+++.|+|||.+.+...+.++||||||+++|+|++|+.||........ ... .. .....+....+
T Consensus 155 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~---~~-~~~~~~~~~~~---- 222 (290)
T cd05580 155 ---TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQI-YEK---IL-EGKVRFPSFFS---- 222 (290)
T ss_pred ---CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHH-HHH---Hh-cCCccCCccCC----
Confidence 2334688999999999888889999999999999999999999875432110 110 00 00111222111
Q ss_pred HHHHHHHHHHHhcccCCCCCCC-----CHHHHHH
Q 012219 409 QDIILVSTVAFSCLRSQPKSRP-----TMQLVSN 437 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RP-----s~~~v~~ 437 (468)
..+.+++.+||..||.+|| +++++++
T Consensus 223 ---~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 223 ---PDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred ---HHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 1266789999999999999 6666663
No 256
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=2.5e-38 Score=305.36 Aligned_cols=194 Identities=26% Similarity=0.424 Sum_probs=159.1
Q ss_pred cceeeeeCCceEEEEEcC---CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee--CCEEEEEEE
Q 012219 175 KYCIGTGGYGSVYRARLP---SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH--RKCMFLIYE 249 (468)
Q Consensus 175 ~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e 249 (468)
...||+|+||.||+|+.. +++.+|+|.+...... ..+.+|++++++++||||+++++++.. ....++++|
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGIS-----MSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCc-----HHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEe
Confidence 457999999999999754 5678999998754322 346789999999999999999998854 456899999
Q ss_pred eccCCChhhhhhcCc------ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee----CCCCCeEEeec
Q 012219 250 YMEMGSLFCVLRTDE------EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLL----NSELEAFVADF 319 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~------~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll----~~~~~~kl~Df 319 (468)
|+. ++|.+++.... ....+++..+..++.||+.||.||| +.+|+||||||+|||+ +.++.+||+||
T Consensus 81 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivHrDlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07868 81 YAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred ccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEecCCCCcCcEEEeec
Confidence 986 58887775321 2234888999999999999999999 7899999999999999 45678999999
Q ss_pred cccccccCCCC---CceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCc
Q 012219 320 GVARLLNFDSS---NRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGEL 377 (468)
Q Consensus 320 g~~~~~~~~~~---~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~ 377 (468)
|+++....... ......+|+.|+|||++.+ ..++.++||||+||++|||++|++||..
T Consensus 157 G~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~ 218 (317)
T cd07868 157 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred CceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence 99987643221 2234568999999998876 4588999999999999999999999864
No 257
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=7.9e-38 Score=293.55 Aligned_cols=252 Identities=29% Similarity=0.414 Sum_probs=204.7
Q ss_pred CccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
+|++.+.||+|++|.||+|... +++.|++|++...... ...+.+.+|++.+.+++|+|++++++++...+..++|+|
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 79 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE--EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLE 79 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch--HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEE
Confidence 6788899999999999999765 5999999999766542 235678899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCT-PPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~-~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
|+++++|.+++... ..+++..++.++.|++.|++||| + .+++|+||+|+||+++.++.++|+|||.+......
T Consensus 80 ~~~~~~L~~~l~~~---~~l~~~~~~~~~~~l~~~l~~lh---~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~ 153 (264)
T cd06623 80 YMDGGSLADLLKKV---GKIPEPVLAYIARQILKGLDYLH---TKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENT 153 (264)
T ss_pred ecCCCcHHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHh---ccCCCccCCCCHHHEEECCCCCEEEccCccceecccC
Confidence 99999999999764 34899999999999999999999 7 89999999999999999999999999999876544
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccc-hhhhcccccccccCCCCCCccchhH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSS-WSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
........++..|+|||...+..++.++||||||+++|+|+||+.||....... .... ........+......
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~---- 227 (264)
T cd06623 154 LDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELM--QAICDGPPPSLPAEE---- 227 (264)
T ss_pred CCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHH--HHHhcCCCCCCCccc----
Confidence 433334568889999999998899999999999999999999999987654211 1111 011111111111110
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
....+.+++.+|++.+|++||++.+++++
T Consensus 228 --~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 228 --FSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred --CCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 11237779999999999999999999864
No 258
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=2.3e-38 Score=301.81 Aligned_cols=260 Identities=23% Similarity=0.306 Sum_probs=194.9
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|++.+.||+|++|.||+|... +++.||+|.+....... ....+.+|++++++++|+||+++++++...+..++||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 82 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEG--APFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVF 82 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccC--CchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEE
Confidence 57888999999999999999764 68999999987543221 2245678999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+.+ +|.+++..... .+++.....++.|++.||.||| +.+++||||||+||+++.++.+||+|||+++.....
T Consensus 83 e~~~~-~L~~~~~~~~~--~~~~~~~~~~~~ql~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 156 (291)
T cd07844 83 EYLDT-DLKQYMDDCGG--GLSMHNVRLFLFQLLRGLAYCH---QRRVLHRDLKPQNLLISERGELKLADFGLARAKSVP 156 (291)
T ss_pred ecCCC-CHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHH---hCCeecccCCHHHEEEcCCCCEEECccccccccCCC
Confidence 99985 89988875433 4789999999999999999999 789999999999999999999999999998765332
Q ss_pred CCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccc---------------cc
Q 012219 329 SSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIK---------------LI 392 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~---------------~~ 392 (468)
........++..|+|||+..+ ..++.++||||+|+++|||++|+.||............... ..
T Consensus 157 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (291)
T cd07844 157 SKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNP 236 (291)
T ss_pred CccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcc
Confidence 222223346788999998865 45889999999999999999999998654311110000000 00
Q ss_pred cccCCCCCCccchhHH------HHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 393 DLLDPRLSPPVDQKIR------QDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 393 ~~~~~~~~~~~~~~~~------~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
................ .....+.+++.+|++.+|++|||+.+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 237 EFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred ccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0000000000000000 00123668999999999999999999874
No 259
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=2.6e-38 Score=305.27 Aligned_cols=194 Identities=26% Similarity=0.423 Sum_probs=158.5
Q ss_pred cceeeeeCCceEEEEEcC---CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee--CCEEEEEEE
Q 012219 175 KYCIGTGGYGSVYRARLP---SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH--RKCMFLIYE 249 (468)
Q Consensus 175 ~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e 249 (468)
...||+|+||.||+|+.. ++..||+|.+...... ..+.+|+++++.++||||+++++++.. +...++|+|
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e 80 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGIS-----MSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFD 80 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCc-----HHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEe
Confidence 357999999999999854 4578999998754322 356789999999999999999998854 567899999
Q ss_pred eccCCChhhhhhcC------cccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee----CCCCCeEEeec
Q 012219 250 YMEMGSLFCVLRTD------EEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLL----NSELEAFVADF 319 (468)
Q Consensus 250 ~~~~gsL~~~l~~~------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll----~~~~~~kl~Df 319 (468)
|+.+ +|.+++... .....+++..+..++.||+.||.||| +.+|+||||||+||++ +.++.+||+||
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07867 81 YAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred eeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH---hCCEEcCCCCHHHEEEccCCCCCCcEEEeec
Confidence 9875 777776432 12234788999999999999999999 7899999999999999 56678999999
Q ss_pred cccccccCCCC---CceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCc
Q 012219 320 GVARLLNFDSS---NRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGEL 377 (468)
Q Consensus 320 g~~~~~~~~~~---~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~ 377 (468)
|+++....... ......+|+.|+|||++.+ ..++.++|||||||++|||+||+.||..
T Consensus 157 G~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 157 GFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred cceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 99987643221 1233468899999998876 4588999999999999999999999864
No 260
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=2.9e-38 Score=304.76 Aligned_cols=255 Identities=23% Similarity=0.321 Sum_probs=201.8
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|+..+.||+|++|.||+|... +++.+|+|.+...........+.+..|++++..++|+||+++++.+......++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888899999999999999764 58999999998765443345567889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+.+++|.+++.... ...+++..+..++.|++.||+||| +.+++|+||||+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~-~~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 156 (316)
T cd05574 81 DYCPGGELFRLLQRQP-GKCLSEEVARFYAAEVLLALEYLH---LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVE 156 (316)
T ss_pred EecCCCCHHHHHHhCC-CCccCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChHHeEEcCCCCEEEeecchhhccccc
Confidence 9999999999987542 235899999999999999999999 789999999999999999999999999998765321
Q ss_pred CC-----------------------------CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCccc
Q 012219 329 SS-----------------------------NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLS 379 (468)
Q Consensus 329 ~~-----------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~ 379 (468)
.. ......|+..|+|||++.+..++.++||||||+++|+|++|+.||....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 11 1112357889999999998889999999999999999999999987543
Q ss_pred ccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCC----HHHHHHH
Q 012219 380 SSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPT----MQLVSNE 438 (468)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs----~~~v~~~ 438 (468)
..... ....+.....+... .....+.+++.+|++.||++||+ +++++.+
T Consensus 237 ~~~~~-------~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 237 RDETF-------SNILKKEVTFPGSP---PVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred hHHHH-------HHHhcCCccCCCcc---ccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 22111 11111111111110 01223778999999999999999 7777753
No 261
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=3.9e-38 Score=294.56 Aligned_cols=250 Identities=24% Similarity=0.337 Sum_probs=198.5
Q ss_pred CccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchh--hhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETE--ELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
+|...+.||+|++|.||+|... +++.|++|.+...... .....+.+.+|+++++.++|+|++++++++......+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 3667788999999999999765 7899999998654321 123456788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
+||+++++|.+++.... .+++..+..++.|++.|++||| +.+++|+||+|+||+++.++.+||+|||++.....
T Consensus 81 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~ 154 (258)
T cd06632 81 LELVPGGSLAKLLKKYG---SFPEPVIRLYTRQILLGLEYLH---DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVE 154 (258)
T ss_pred EEecCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEccCccceeccc
Confidence 99999999999997643 3789999999999999999999 78999999999999999999999999999876543
Q ss_pred CCCCceeccccccccccccccCCC-CCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchh
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTMV-VTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQK 406 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (468)
.. ......++..|+|||.+.... ++.++|+||||+++|+|++|+.||............ ... ...+.......
T Consensus 155 ~~-~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~-~~~--~~~~~~~~~~~-- 228 (258)
T cd06632 155 FS-FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKI-GRS--KELPPIPDHLS-- 228 (258)
T ss_pred cc-cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHH-Hhc--ccCCCcCCCcC--
Confidence 22 233456888999999987766 899999999999999999999998754421111110 000 00011111111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
..+.+++.+||+.+|++||++.+++.
T Consensus 229 -----~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 229 -----DEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred -----HHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 12567899999999999999999875
No 262
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=2.9e-38 Score=302.89 Aligned_cols=257 Identities=25% Similarity=0.397 Sum_probs=198.2
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCC----EEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGK----VVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCM 244 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 244 (468)
++|...+.||+|+||.||+|.. .++. .+|+|.+...... .....+.+|+.+++.++||||++++|+|.... .
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~-~ 83 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGP--KANVEFMDEALIMASMDHPHLVRLLGVCLSPT-I 83 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCH--HHHHHHHHHHHHHHhCCCCCcccEEEEEcCCC-c
Confidence 5677888999999999999975 3443 5788888754432 22346889999999999999999999997654 6
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
++++||+++|+|.+++..... .+++..++.++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++.
T Consensus 84 ~~v~e~~~~g~l~~~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~ 158 (303)
T cd05110 84 QLVTQLMPHGCLLDYVHEHKD--NIGSQLLLNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (303)
T ss_pred eeeehhcCCCCHHHHHHhccc--CCCHHHHHHHHHHHHHHHHHHh---hcCeeccccccceeeecCCCceEEcccccccc
Confidence 789999999999999875432 3788999999999999999999 78999999999999999999999999999987
Q ss_pred ccCCCCC--ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 325 LNFDSSN--RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 325 ~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
....... .....++..|+|||++.+..++.++|||||||++|||++ |+.||.......... ....... .....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~--~~~~~~~--~~~~~ 234 (303)
T cd05110 159 LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPD--LLEKGER--LPQPP 234 (303)
T ss_pred ccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH--HHHCCCC--CCCCC
Confidence 6432221 112335678999999998899999999999999999998 999986543211100 0000000 00011
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
.. ...+.+++.+||..+|++||++.+++..|.+...+
T Consensus 235 ~~-------~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 235 IC-------TIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred CC-------CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 11 12367789999999999999999999999886544
No 263
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.5e-38 Score=314.59 Aligned_cols=191 Identities=27% Similarity=0.330 Sum_probs=164.4
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
..|.+...||+|+||.||++... .++.||||.... ..+.+|++++++++|+||+++++++...+..++||
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~---------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~ 239 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY---------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVL 239 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc---------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 36888999999999999999764 578899996432 23568999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
|++. ++|.+++.... ..+++.+++.++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++.....
T Consensus 240 e~~~-~~L~~~l~~~~--~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~ 313 (461)
T PHA03211 240 PKYR-SDLYTYLGARL--RPLGLAQVTAVARQLLSAIDYIH---GEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGS 313 (461)
T ss_pred EccC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCEEECcCCHHHEEECCCCCEEEcccCCceecccc
Confidence 9995 68888886533 24899999999999999999999 789999999999999999999999999999875432
Q ss_pred CC--CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCC
Q 012219 329 SS--NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPG 375 (468)
Q Consensus 329 ~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 375 (468)
.. ......||..|+|||++.+..++.++|||||||++|||++|..|+
T Consensus 314 ~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~l 362 (461)
T PHA03211 314 WSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASL 362 (461)
T ss_pred cccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCc
Confidence 21 122356899999999999999999999999999999999987654
No 264
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.4e-38 Score=322.79 Aligned_cols=201 Identities=18% Similarity=0.261 Sum_probs=163.0
Q ss_pred HHHHhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccC------CceeeEEEE
Q 012219 165 MIEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRH------RNIVKLYGF 237 (468)
Q Consensus 165 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h------~niv~l~~~ 237 (468)
+...+++|.+.+.||+|+||+||+|.. ..++.||||+++..... ...+..|+++++.++| .++++++++
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~----~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~ 199 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKY----TRDAKIEIQFMEKVRQADPADRFPLMKIQRY 199 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhh----HHHHHHHHHHHHHHhhcCcccCcceeeeEEE
Confidence 334567899999999999999999975 46788999999643221 2344567777666654 558899998
Q ss_pred EeeC-CEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC----
Q 012219 238 CLHR-KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSEL---- 312 (468)
Q Consensus 238 ~~~~-~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~---- 312 (468)
+... ...++|||++ +++|.+++.... .+++..+..++.||+.||.|||+ ..+|+||||||+|||++.++
T Consensus 200 ~~~~~~~~~iv~~~~-g~~l~~~l~~~~---~l~~~~~~~i~~qi~~aL~yLH~--~~gIiHrDlKP~NILl~~~~~~~~ 273 (467)
T PTZ00284 200 FQNETGHMCIVMPKY-GPCLLDWIMKHG---PFSHRHLAQIIFQTGVALDYFHT--ELHLMHTDLKPENILMETSDTVVD 273 (467)
T ss_pred EEcCCceEEEEEecc-CCCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHh--cCCeecCCCCHHHEEEecCCcccc
Confidence 8764 5688999988 678988886543 38999999999999999999993 25999999999999998765
Q ss_pred ------------CeEEeeccccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcc
Q 012219 313 ------------EAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELL 378 (468)
Q Consensus 313 ------------~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~ 378 (468)
.+||+|||.+.... .......||+.|+|||++.+..++.++|||||||++|||++|+.||+..
T Consensus 274 ~~~~~~~~~~~~~vkl~DfG~~~~~~---~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~ 348 (467)
T PTZ00284 274 PVTNRALPPDPCRVRICDLGGCCDER---HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTH 348 (467)
T ss_pred cccccccCCCCceEEECCCCccccCc---cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 49999999886432 2233467999999999999999999999999999999999999999754
No 265
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=4.6e-38 Score=300.82 Aligned_cols=262 Identities=26% Similarity=0.290 Sum_probs=198.5
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchh--hhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETE--ELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
+|++.+.||+|++|.||+|.. .+++.||+|.+...... .......+..|++++++++|+||+++++++...+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 467788999999999999975 46899999999765433 112235567899999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|||+ +|+|.+++.... ..+++..++.++.||++||.||| +.+++|+||+|+||+++.++.++|+|||+++....
T Consensus 81 ~e~~-~~~L~~~i~~~~--~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~ 154 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS--IVLTPADIKSYMLMTLRGLEYLH---SNWILHRDLKPNNLLIASDGVLKLADFGLARSFGS 154 (298)
T ss_pred Eccc-CCCHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeecCCChhhEEEcCCCCEEEccceeeeeccC
Confidence 9999 899999997644 24899999999999999999999 78999999999999999999999999999987654
Q ss_pred CCCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhc--------------ccccc
Q 012219 328 DSSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDK--------------NIKLI 392 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~--------------~~~~~ 392 (468)
.........++..|+|||.+.+ ..++.++|||||||++|||++|.+||............ .....
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (298)
T cd07841 155 PNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLP 234 (298)
T ss_pred CCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccc
Confidence 3333333456788999998864 46788999999999999999998877643321100000 00000
Q ss_pred cccCCCCCC--ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 393 DLLDPRLSP--PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 393 ~~~~~~~~~--~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
......... ............+.+++.+||+.||++|||+.+++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 235 DYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred ccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 000000000 0000011112347789999999999999999999965
No 266
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=2.4e-38 Score=298.11 Aligned_cols=248 Identities=26% Similarity=0.403 Sum_probs=192.8
Q ss_pred eeeeeCCceEEEEEcCC-------CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 177 CIGTGGYGSVYRARLPS-------GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 177 ~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
.||+|+||.||+|...+ +..+|+|.+...... .....|.+|+++++.++||||+++++++......++|||
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATD--QEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIME 79 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccch--hhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEe
Confidence 58999999999997542 357999988654322 234678899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCc----ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC-----CeEEeecc
Q 012219 250 YMEMGSLFCVLRTDE----EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSEL-----EAFVADFG 320 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~-----~~kl~Dfg 320 (468)
|+++++|.+++.... ....+++.+++.++.|++.||.||| +.+++|+||||+||+++.++ .++++|||
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg 156 (269)
T cd05044 80 LMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE---QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFG 156 (269)
T ss_pred ccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH---hCCcccCCCChheEEEecCCCCCCcceEECCcc
Confidence 999999999997532 2234788999999999999999999 78999999999999999887 89999999
Q ss_pred ccccccCCCC--CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCC
Q 012219 321 VARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDP 397 (468)
Q Consensus 321 ~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 397 (468)
+++....... ......++..|+|||++.+..++.++|||||||++|||+| |+.||........... +..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~--------~~~ 228 (269)
T cd05044 157 LARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQH--------VTA 228 (269)
T ss_pred cccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHH--------Hhc
Confidence 9876532211 1112245678999999999999999999999999999998 9999864432111100 000
Q ss_pred CCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 012219 398 RLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFI 440 (468)
Q Consensus 398 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~ 440 (468)
........... ..+.+++.+||..+|++||+++++.+.|+
T Consensus 229 ~~~~~~~~~~~---~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 229 GGRLQKPENCP---DKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred CCccCCcccch---HHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 00000011111 23678999999999999999999999886
No 267
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.8e-38 Score=302.60 Aligned_cols=255 Identities=25% Similarity=0.378 Sum_probs=199.5
Q ss_pred ccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEe
Q 012219 172 FHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEY 250 (468)
Q Consensus 172 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (468)
|.....||+|+||.||++.. .++..||+|.+...... ..+.+.+|+..++.++|+|++++++.+...+..++||||
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~ 100 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQ---RRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEF 100 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHH---HHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeC
Confidence 33346699999999999975 46889999998654332 345688999999999999999999999999999999999
Q ss_pred ccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCC
Q 012219 251 MEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSS 330 (468)
Q Consensus 251 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 330 (468)
+++++|.+++... .+++.++..++.||+.||.||| +.+++||||||+||+++.++.++|+|||++........
T Consensus 101 ~~~~~L~~~~~~~----~l~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~ 173 (292)
T cd06658 101 LEGGALTDIVTHT----RMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP 173 (292)
T ss_pred CCCCcHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc
Confidence 9999999988542 3788999999999999999999 77999999999999999999999999999876543333
Q ss_pred CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHH
Q 012219 331 NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQD 410 (468)
Q Consensus 331 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (468)
......++..|+|||+..+..++.++||||||+++|||++|+.||........ .. .......+...... ..
T Consensus 174 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~-~~---~~~~~~~~~~~~~~-----~~ 244 (292)
T cd06658 174 KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA-MR---RIRDNLPPRVKDSH-----KV 244 (292)
T ss_pred cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HH---HHHhcCCCcccccc-----cc
Confidence 33345688999999999888899999999999999999999999864332111 00 01111111111110 01
Q ss_pred HHHHHHHHHhcccCCCCCCCCHHHHHHH-HHhcCCC
Q 012219 411 IILVSTVAFSCLRSQPKSRPTMQLVSNE-FIARNKA 445 (468)
Q Consensus 411 ~~~l~~l~~~cl~~dP~~RPs~~~v~~~-l~~~~~~ 445 (468)
...+..++.+|+..||++|||+++++++ |.+....
T Consensus 245 ~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~ 280 (292)
T cd06658 245 SSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGP 280 (292)
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCC
Confidence 1126678889999999999999999954 5554443
No 268
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=6.1e-38 Score=299.10 Aligned_cols=256 Identities=25% Similarity=0.366 Sum_probs=203.3
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|+||.||++.. .+++.|++|.+...... ..+.+.+|+.+++.++|||++++++++...+..++|+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~---~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~ 95 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQP---KKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVM 95 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccch---HHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEE
Confidence 5788899999999999999964 46889999998644332 2356889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++++|.+++... .+++.++..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++......
T Consensus 96 e~~~~~~L~~~~~~~----~l~~~~~~~i~~~l~~al~~LH---~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~ 168 (293)
T cd06647 96 EYLAGGSLTDVVTET----CMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 168 (293)
T ss_pred ecCCCCcHHHHHhhc----CCCHHHHHHHHHHHHHHHHHHH---hCCEeeccCCHHHEEEcCCCCEEEccCcceeccccc
Confidence 999999999998653 3788899999999999999999 789999999999999999999999999998766544
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
........+++.|+|||.+....++.++||||||+++|++++|+.||........... ....-.+.... ..
T Consensus 169 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~----~~~~~~~~~~~--~~--- 239 (293)
T cd06647 169 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL----IATNGTPELQN--PE--- 239 (293)
T ss_pred ccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheee----hhcCCCCCCCC--cc---
Confidence 3333445688899999999888899999999999999999999999975432111000 00000011110 11
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHH-HHhcCC
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPTMQLVSNE-FIARNK 444 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~-l~~~~~ 444 (468)
.....+.+++.+||..+|++||++.+++.+ |++...
T Consensus 240 ~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~ 276 (293)
T cd06647 240 KLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK 276 (293)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence 111236789999999999999999999965 555433
No 269
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.5e-38 Score=310.35 Aligned_cols=194 Identities=24% Similarity=0.403 Sum_probs=169.8
Q ss_pred CccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-C-----CceeeEEEEEeeCCE
Q 012219 171 DFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEELASLESFGNEARLLSQIR-H-----RNIVKLYGFCLHRKC 243 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h-----~niv~l~~~~~~~~~ 243 (468)
+|.+.+.||+|+||.|.+|. ..+++.||||+++..... ..+-..|+.+|..|+ | -|+|++++|+..+++
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f----~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~H 262 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRF----LRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNH 262 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHH----HHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccc
Confidence 78999999999999999995 567999999999876543 345568999999997 3 489999999999999
Q ss_pred EEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC--CCeEEeeccc
Q 012219 244 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSE--LEAFVADFGV 321 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~--~~~kl~Dfg~ 321 (468)
.|||+|.+. -+|.++++.+.- .+++...+..|+.||+.||.+|| ..+|||+||||+||||.+- ..+||+|||.
T Consensus 263 lciVfELL~-~NLYellK~n~f-~Glsl~~ir~~~~Qil~~L~~L~---~l~IIHcDLKPENILL~~~~r~~vKVIDFGS 337 (586)
T KOG0667|consen 263 LCIVFELLS-TNLYELLKNNKF-RGLSLPLVRKFAQQILTALLFLH---ELGIIHCDLKPENILLKDPKRSRIKVIDFGS 337 (586)
T ss_pred eeeeehhhh-hhHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCChhheeeccCCcCceeEEeccc
Confidence 999999996 599999987654 44999999999999999999999 7899999999999999765 4689999999
Q ss_pred cccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCC
Q 012219 322 ARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGE 376 (468)
Q Consensus 322 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~ 376 (468)
++..... ......+..|+|||++.+.+|+.+.||||||||++||++|.+.|.
T Consensus 338 Sc~~~q~---vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfp 389 (586)
T KOG0667|consen 338 SCFESQR---VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFP 389 (586)
T ss_pred ccccCCc---ceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccC
Confidence 9876432 225567889999999999999999999999999999999987664
No 270
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.1e-38 Score=308.44 Aligned_cols=190 Identities=23% Similarity=0.334 Sum_probs=162.6
Q ss_pred hhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
..+|.+.+.||+|+||.||+|... +++.||+|+..... ...|+.++++++|+||+++++++......++|
T Consensus 65 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~---------~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 135 (357)
T PHA03209 65 SLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT---------TLIEAMLLQNVNHPSVIRMKDTLVSGAITCMV 135 (357)
T ss_pred hcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccc---------cHHHHHHHHhCCCCCCcChhheEEeCCeeEEE
Confidence 457999999999999999999764 56789999754322 23689999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
+|++. ++|.+++.... ..+++..++.++.||+.||.||| +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 136 ~e~~~-~~l~~~l~~~~--~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 209 (357)
T PHA03209 136 LPHYS-SDLYTYLTKRS--RPLPIDQALIIEKQILEGLRYLH---AQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVV 209 (357)
T ss_pred EEccC-CcHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEecCcccccccc
Confidence 99995 68888886533 34899999999999999999999 78999999999999999999999999999975432
Q ss_pred CCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCC
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHP 374 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p 374 (468)
........||..|+|||++.+..++.++|||||||++|||+++..|
T Consensus 210 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~ 255 (357)
T PHA03209 210 -APAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPST 255 (357)
T ss_pred -CcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCc
Confidence 2222345689999999999999999999999999999999985544
No 271
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=6e-38 Score=295.32 Aligned_cols=251 Identities=21% Similarity=0.320 Sum_probs=186.5
Q ss_pred eeeeeCCceEEEEEcCCC---CEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEeccC
Q 012219 177 CIGTGGYGSVYRARLPSG---KVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYMEM 253 (468)
Q Consensus 177 ~lg~G~~g~Vy~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 253 (468)
.||+|+||.||+|...++ ..+++|.+...... ...+.|.+|+.+++.++||||++++++|......++||||+++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 79 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASS--KEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCEL 79 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCCh--HHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCC
Confidence 599999999999965333 34667766544322 2356899999999999999999999999999999999999999
Q ss_pred CChhhhhhcCcc-cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC--C
Q 012219 254 GSLFCVLRTDEE-AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS--S 330 (468)
Q Consensus 254 gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~--~ 330 (468)
|+|.++++.... ....++.....++.||+.||+||| +.+++||||||+||+++.++.++|+|||++....... .
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH---~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 156 (268)
T cd05086 80 GDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMH---KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIE 156 (268)
T ss_pred CcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH---HCCeeccCCccceEEEcCCccEEecccccccccCcchhhh
Confidence 999999976432 233566778899999999999999 7899999999999999999999999999986432111 1
Q ss_pred CceeccccccccccccccC-------CCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhh-cccccccccCCCCCC
Q 012219 331 NRTLLAGTYGYIAPELAYT-------MVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLD-KNIKLIDLLDPRLSP 401 (468)
Q Consensus 331 ~~~~~~g~~~y~aPE~~~~-------~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 401 (468)
......++..|+|||+... ..++.++|||||||++|||++ |..||........... .........++.+..
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (268)
T cd05086 157 TEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLEL 236 (268)
T ss_pred cccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCC
Confidence 1223457889999998743 245789999999999999997 5778764432211110 011112223333333
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFI 440 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~ 440 (468)
.... .+.+++..|| .+|++||++++|++.|.
T Consensus 237 ~~~~-------~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 237 PYSE-------RWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCcH-------HHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 2222 2556788899 67999999999998774
No 272
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.2e-38 Score=302.62 Aligned_cols=261 Identities=22% Similarity=0.301 Sum_probs=194.3
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
+|.+.+.||+|+||.||+|.. .+|+.+|+|++....... .....+.+|++++++++|+|++++++++.+....++++|
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~-~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 79 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE-GVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFE 79 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccc-cCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEe
Confidence 477788999999999999975 468999999987543221 223467789999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|++ ++|.+++.... ..+++..++.++.||++||.||| +.+++||||||+||+++.++.++|+|||+++......
T Consensus 80 ~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 153 (284)
T cd07839 80 YCD-QDLKKYFDSCN--GDIDPEIVKSFMFQLLKGLAFCH---SHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 153 (284)
T ss_pred cCC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC
Confidence 997 57888776432 23899999999999999999999 7899999999999999999999999999998664433
Q ss_pred CCceeccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccc------------ccccccC
Q 012219 330 SNRTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNI------------KLIDLLD 396 (468)
Q Consensus 330 ~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~------------~~~~~~~ 396 (468)
.......++..|+|||++.+. .++.++|||||||++|||+||+.|+.............. ...+..+
T Consensus 154 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07839 154 RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPD 233 (284)
T ss_pred CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccc
Confidence 333344678899999988764 478999999999999999999988643222111000000 0000000
Q ss_pred CCCCCccc------hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 397 PRLSPPVD------QKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 397 ~~~~~~~~------~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
........ .........+.+++.+||+.||.+|||+++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 234 YKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred ccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 00000000 0000111236789999999999999999999763
No 273
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.3e-38 Score=299.29 Aligned_cols=253 Identities=25% Similarity=0.342 Sum_probs=200.2
Q ss_pred CccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
+|+..+.||+|++|.||++... +++.+++|.+...... ...+.+.+|++++++++||||+++++++...+..++++|
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINE--AIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICME 79 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccCh--HHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEE
Confidence 5777889999999999999765 6899999998765433 234678899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCT-PPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~-~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
|+++++|.+++.... ..+++.....++.|++.|++||| + .+++|+||||+||+++.++.++|+|||.+......
T Consensus 80 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH---~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~ 154 (265)
T cd06605 80 YMDGGSLDKILKEVQ--GRIPERILGKIAVAVLKGLTYLH---EKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS 154 (265)
T ss_pred ecCCCcHHHHHHHcc--CCCCHHHHHHHHHHHHHHHHHHc---CCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHH
Confidence 999999999997643 34888999999999999999999 6 89999999999999999999999999998765322
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhh-hcccccccccCCCCCCccchhH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSL-DKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
... ...++..|+|||++.+..++.++||||||+++|+|++|+.||.......... ...........+.....
T Consensus 155 ~~~--~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 227 (265)
T cd06605 155 LAK--TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSG----- 227 (265)
T ss_pred Hhh--cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChh-----
Confidence 111 1568889999999998899999999999999999999999986542111100 00000111111111111
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.....+.+++.+||..+|++|||+.+++.+
T Consensus 228 -~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 228 -KFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred -hcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 011226789999999999999999998843
No 274
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=8.5e-38 Score=293.75 Aligned_cols=252 Identities=23% Similarity=0.330 Sum_probs=194.5
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcch--hhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC--CEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSET--EELASLESFGNEARLLSQIRHRNIVKLYGFCLHR--KCM 244 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 244 (468)
.+|++.+.||+|+||.||+|.. .+++.||+|.+..... ......+.+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 4688899999999999999975 4689999998864321 1223456788999999999999999999988763 467
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
++++||+++++|.+++.... .+++...+.++.|++.||.||| +.+++|+||||+||+++.++.++|+|||+++.
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~l~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~ 155 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG---ALTENVTRKYTRQILEGVSYLH---SNMIVHRDIKGANILRDSVGNVKLGDFGASKR 155 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEecCCCCEEECcCccccc
Confidence 89999999999999987543 2788889999999999999999 78999999999999999999999999999876
Q ss_pred ccCC---CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 325 LNFD---SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 325 ~~~~---~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
.... ........++..|+|||++.+..++.++|||||||++|||++|+.||........... .......+....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~ 232 (265)
T cd06652 156 LQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFK---IATQPTNPVLPP 232 (265)
T ss_pred cccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHH---HhcCCCCCCCch
Confidence 5321 1112234588899999999888899999999999999999999999875432211110 000111111111
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.....+.+++.+|+. +|++||++++++.+
T Consensus 233 -------~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 233 -------HVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred -------hhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 111235667888884 99999999998853
No 275
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=7.7e-38 Score=300.27 Aligned_cols=254 Identities=22% Similarity=0.261 Sum_probs=196.3
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
+|++.+.||+|+||.||++.. ..++.|++|.+...........+.+.+|+++++.++||||+++++.+..++..++|||
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 81 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVME 81 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEe
Confidence 688889999999999999975 4578999999876654333445678899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|+++++|.+++.... .+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||+++......
T Consensus 82 ~~~g~~L~~~l~~~~---~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~ 155 (305)
T cd05609 82 YVEGGDCATLLKNIG---ALPVDMARMYFAETVLALEYLH---NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSL 155 (305)
T ss_pred cCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHEEECCCCCEEEeeCCCccccCcCc
Confidence 999999999997543 3889999999999999999999 7799999999999999999999999999986421100
Q ss_pred C---------------CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccc
Q 012219 330 S---------------NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDL 394 (468)
Q Consensus 330 ~---------------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 394 (468)
. ......++..|+|||.+....++.++|||||||++|||++|+.||........... ......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~--~~~~~~ 233 (305)
T cd05609 156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQ--VISDDI 233 (305)
T ss_pred cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH--HHhccc
Confidence 0 01123567889999999888899999999999999999999999864322111110 000111
Q ss_pred cCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 395 LDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
..+......+ ..+.+++.+||+.||++||++.++.+.+
T Consensus 234 ~~~~~~~~~~-------~~~~~li~~~l~~~P~~R~~~~~~~~ll 271 (305)
T cd05609 234 EWPEGDEALP-------ADAQDLISRLLRQNPLERLGTGGAFEVK 271 (305)
T ss_pred CCCCccccCC-------HHHHHHHHHHhccChhhccCccCHHHHH
Confidence 1111111111 1267899999999999999954443333
No 276
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.9e-38 Score=313.28 Aligned_cols=256 Identities=23% Similarity=0.291 Sum_probs=193.7
Q ss_pred hhCccccceeeeeCCceEEEEEcC---CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLP---SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMF 245 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 245 (468)
..+|.+.+.||+|+||.||++... .+..||+|.+.... .+.+|++++++++||||+++++++......+
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~--------~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~ 162 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK--------TPGREIDILKTISHRAIINLIHAYRWKSTVC 162 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc--------cHHHHHHHHHhcCCCCccceeeeEeeCCEEE
Confidence 357999999999999999999643 46789999886532 3457999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccc
Q 012219 246 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLL 325 (468)
Q Consensus 246 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 325 (468)
++||++. ++|.+++... ..+++..++.++.||+.||.||| +.+|+||||||+|||++.++.++|+|||+++..
T Consensus 163 lv~e~~~-~~l~~~l~~~---~~l~~~~~~~i~~ql~~aL~~LH---~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~ 235 (392)
T PHA03207 163 MVMPKYK-CDLFTYVDRS---GPLPLEQAITIQRRLLEALAYLH---GRGIIHRDVKTENIFLDEPENAVLGDFGAACKL 235 (392)
T ss_pred EEehhcC-CCHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEccCcccccc
Confidence 9999996 6888888433 34899999999999999999999 789999999999999999999999999999765
Q ss_pred cCCCC--CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccch--hhhccccccc--------
Q 012219 326 NFDSS--NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSW--SLDKNIKLID-------- 393 (468)
Q Consensus 326 ~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~--~~~~~~~~~~-------- 393 (468)
..... ......||+.|+|||++....++.++|||||||++|||++|+.||........ ..........
T Consensus 236 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~ 315 (392)
T PHA03207 236 DAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQ 315 (392)
T ss_pred CcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCC
Confidence 43222 12235689999999999999999999999999999999999999864332110 0000000000
Q ss_pred -----------ccCCCCCCc--cchhHH--HHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 394 -----------LLDPRLSPP--VDQKIR--QDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 394 -----------~~~~~~~~~--~~~~~~--~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
.......+. ....+. .....+.+++.+|+..||++|||+.+++.+-
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p 376 (392)
T PHA03207 316 NGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLP 376 (392)
T ss_pred ccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 000000000 000000 0012366789999999999999999988553
No 277
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=8.3e-38 Score=292.08 Aligned_cols=251 Identities=24% Similarity=0.348 Sum_probs=198.8
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
+|+..+.||+|+||.||++.. .+++.+|+|.+....... ...+.+.+|++++++++|||++++++.+...+..++|+|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 79 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTK-DERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME 79 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccccc-HHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence 477889999999999999965 478899999987654322 235678899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC-CCeEEeeccccccccCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSE-LEAFVADFGVARLLNFD 328 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~-~~~kl~Dfg~~~~~~~~ 328 (468)
|+++++|.+++.... ...+++..+..++.+++.|++||| +.+++|+||+|+||+++.+ +.++|+|||.+......
T Consensus 80 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (256)
T cd08220 80 YAPGGTLAEYIQKRC-NSLLDEDTILHFFVQILLALHHVH---TKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK 155 (256)
T ss_pred cCCCCCHHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence 999999999997643 234789999999999999999999 7899999999999999865 45799999999876432
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
. ......++..|+|||.+.+..++.++||||||+++|+|++|+.||............. ............
T Consensus 156 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~---- 226 (256)
T cd08220 156 S-KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIM----SGTFAPISDRYS---- 226 (256)
T ss_pred c-cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHH----hcCCCCCCCCcC----
Confidence 2 2223467889999999998889999999999999999999999987543221111100 000011111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
..+.+++.+||+.+|++|||+.+++.+
T Consensus 227 ---~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 227 ---PDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred ---HHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 126679999999999999999999864
No 278
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=5e-38 Score=299.54 Aligned_cols=262 Identities=25% Similarity=0.285 Sum_probs=195.2
Q ss_pred HhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEE
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (468)
++++|.+.+.||+|+||.||+|.. .+++.||+|++...... .....+.+|+++++.++|+||+++.+++......++
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l 80 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEE--GVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTF 80 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcC--CCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEE
Confidence 356899999999999999999965 56889999998754322 122456789999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccccc
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLN 326 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 326 (468)
|+||+. +++.+++.... ..+.+..+..++.|++.||.||| +.+|+|+||||+||+++.++.++|+|||+++...
T Consensus 81 v~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 154 (291)
T cd07870 81 VFEYMH-TDLAQYMIQHP--GGLHPYNVRLFMFQLLRGLAYIH---GQHILHRDLKPQNLLISYLGELKLADFGLARAKS 154 (291)
T ss_pred EEeccc-CCHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChHHEEEcCCCcEEEeccccccccC
Confidence 999996 67777665432 23678888899999999999999 7799999999999999999999999999987654
Q ss_pred CCCCCceeccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccc---------------c
Q 012219 327 FDSSNRTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNI---------------K 390 (468)
Q Consensus 327 ~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~---------------~ 390 (468)
..........+++.|+|||++.+. .++.++|||||||++|||++|+.||+............. .
T Consensus 155 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (291)
T cd07870 155 IPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSK 234 (291)
T ss_pred CCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhh
Confidence 333333344578899999988754 578899999999999999999999975432111100000 0
Q ss_pred cccccCCCCCCccchhHH------HHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 391 LIDLLDPRLSPPVDQKIR------QDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~------~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
.................. .....+.+++.+|+..||++|||+++++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 235 LPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred cccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 000000000000000000 01123678999999999999999999874
No 279
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.2e-37 Score=293.99 Aligned_cols=256 Identities=24% Similarity=0.376 Sum_probs=196.7
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchh-------hhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETE-------ELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK 242 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 242 (468)
+|...+.||+|+||.||+|.. .+++.+|+|.+...... .....+.+.+|+++++.++|+|++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 366788999999999999964 46899999988643221 1123457888999999999999999999999999
Q ss_pred EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccc
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVA 322 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~ 322 (468)
..++|+||+++++|.++++... .+++..+..++.|++.||.||| +.+++||||+|+||+++.++.++++|||++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~~~nil~~~~~~~~l~d~~~~ 155 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYG---RFEEQLVRFFTEQVLEGLAYLH---SKGILHRDLKADNLLVDADGICKISDFGIS 155 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHh---hCCeeecCCChhhEEEcCCCeEEEeecccc
Confidence 9999999999999999997653 4888999999999999999999 779999999999999999999999999999
Q ss_pred ccccCCC--CCceeccccccccccccccCCC--CCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCC
Q 012219 323 RLLNFDS--SNRTLLAGTYGYIAPELAYTMV--VTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPR 398 (468)
Q Consensus 323 ~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 398 (468)
+...... .......++..|+|||.+.... ++.++||||||+++||+++|+.||.............. ....+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~---~~~~~~ 232 (272)
T cd06629 156 KKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGN---KRSAPP 232 (272)
T ss_pred ccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhc---cccCCc
Confidence 7653211 1122345788999999987654 78999999999999999999999864332211111000 000111
Q ss_pred CCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 399 LSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 399 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
....... .....+.+++.+||+.+|++||++++|+++
T Consensus 233 ~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 233 IPPDVSM---NLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred CCccccc---cCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 1111100 111237778999999999999999999864
No 280
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=9.7e-38 Score=293.75 Aligned_cols=254 Identities=27% Similarity=0.439 Sum_probs=197.9
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcch---hhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSET---EELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~---~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (468)
+|+..+.||+|++|.||++.. .+++.+|+|++..... ......+.+.+|++++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 467788999999999999974 6789999999875432 112235678899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC-CeEEeeccccccc
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSEL-EAFVADFGVARLL 325 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~-~~kl~Dfg~~~~~ 325 (468)
|+||+++++|.+++.... .+++..+..++.|++.||.||| +.+++|+||+|+||+++.++ .++|+|||.+...
T Consensus 81 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~ql~~al~~LH---~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~ 154 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG---AFKEAVIINYTEQLLRGLSYLH---ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARL 154 (268)
T ss_pred EEeccCCCcHHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEEccccccccc
Confidence 999999999999987543 4789999999999999999999 78999999999999998776 5899999998776
Q ss_pred cCCCC----CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 326 NFDSS----NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 326 ~~~~~----~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
..... ......++..|+|||.+.+..++.++||||+|+++|+|++|+.||.......... ...........+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~----~~~~~~~~~~~~ 230 (268)
T cd06630 155 AAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLA----LIFKIASATTAP 230 (268)
T ss_pred ccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHH----HHHHHhccCCCC
Confidence 43211 1123457889999999988889999999999999999999999986433211100 000000000111
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
...... ...+.+++.+|++.+|++||++.++++
T Consensus 231 ~~~~~~---~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 231 SIPEHL---SPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred CCchhh---CHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 111111 123667999999999999999999885
No 281
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=2.6e-38 Score=300.90 Aligned_cols=260 Identities=26% Similarity=0.345 Sum_probs=197.4
Q ss_pred CccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
+|++.+.||+|+||.||+|... +++.||+|+++..... ....+.+.+|++++++++|+||+++++++...+..++++|
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDD-EDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhccc-ccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 6888999999999999999765 5889999998754332 1234678899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|++++.+..+.... ..+++.++..++.||+.||.||| ..+++|+||+|+||++++++.+||+|||++.......
T Consensus 81 ~~~~~~l~~~~~~~---~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 154 (288)
T cd07833 81 YVERTLLELLEASP---GGLPPDAVRSYIWQLLQAIAYCH---SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARP 154 (288)
T ss_pred cCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCc
Confidence 99987776665443 23889999999999999999999 7799999999999999999999999999998765433
Q ss_pred C-CceeccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhh--c-----------------c
Q 012219 330 S-NRTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLD--K-----------------N 388 (468)
Q Consensus 330 ~-~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~--~-----------------~ 388 (468)
. ......++..|+|||++.+. .++.++||||||+++|+|++|+.||........... . .
T Consensus 155 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07833 155 ASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPR 234 (288)
T ss_pred cccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcc
Confidence 2 23345678899999999887 889999999999999999999999864322110000 0 0
Q ss_pred cccccccCCCCCCccchhHH-HHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 389 IKLIDLLDPRLSPPVDQKIR-QDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~-~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
.......+............ .....+.+++.+||..+|++||++++++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 235 FAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred ccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 00000000000000000000 01234788999999999999999999875
No 282
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=3.8e-38 Score=294.59 Aligned_cols=252 Identities=24% Similarity=0.366 Sum_probs=199.6
Q ss_pred CccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
+|++.+.||+|+||.||+|... +|..+|+|.+....... ...+.+.+|+++++.++|+|++++++++......++|+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e 79 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPV-KEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME 79 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccc-hhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence 4778899999999999999764 58899999987643221 234577899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCC-eEEeeccccccccCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELE-AFVADFGVARLLNFD 328 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~-~kl~Dfg~~~~~~~~ 328 (468)
|+++++|.+++..... ..+++..+..++.|++.||.||| +.+++|+||||+||++++++. ++|+|||.+......
T Consensus 80 ~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh---~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (257)
T cd08225 80 YCDGGDLMKRINRQRG-VLFSEDQILSWFVQISLGLKHIH---DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS 155 (257)
T ss_pred cCCCCcHHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence 9999999999875432 34789999999999999999999 779999999999999998864 699999999876543
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
........|++.|+|||+..+..++.++||||||+++|||++|+.||............ ...... ...+...
T Consensus 156 ~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~~~-~~~~~~~---- 227 (257)
T cd08225 156 MELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKI---CQGYFA-PISPNFS---- 227 (257)
T ss_pred cccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHH---hcccCC-CCCCCCC----
Confidence 33333456888999999998888999999999999999999999998744322111111 011111 1111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
..+.+++.+|+..+|++|||+.+++.+
T Consensus 228 ---~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 228 ---RDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred ---HHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 126678999999999999999999854
No 283
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.3e-37 Score=294.39 Aligned_cols=249 Identities=30% Similarity=0.474 Sum_probs=198.4
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc---CCceeeEEEEEeeCCEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIR---HRNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~l 246 (468)
.|+..+.||+|+||.||+|.. .+++.+|+|.+...... ...+.+.+|++++++++ |||++++++++......++
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~l 79 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPD--DDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWI 79 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCc--hhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEE
Confidence 466778899999999999975 57899999998754322 23457888999999997 9999999999999999999
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccccc
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLN 326 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 326 (468)
||||+++++|.++++.. .+++...+.++.|++.||.||| ..+++|+||+|+||+++.++.++|+|||++....
T Consensus 80 v~e~~~~~~L~~~~~~~----~l~~~~~~~i~~~i~~~l~~lh---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06917 80 IMEYAEGGSVRTLMKAG----PIAEKYISVIIREVLVALKYIH---KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLN 152 (277)
T ss_pred EEecCCCCcHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCcCHHHEEEcCCCCEEEccCCceeecC
Confidence 99999999999998653 4889999999999999999999 7899999999999999999999999999998765
Q ss_pred CCCCCceeccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccch
Q 012219 327 FDSSNRTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQ 405 (468)
Q Consensus 327 ~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (468)
..........|+..|+|||.+.++ .++.++|||||||++|+|++|+.||.......... .......+.+...
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~--- 225 (277)
T cd06917 153 QNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMM----LIPKSKPPRLEDN--- 225 (277)
T ss_pred CCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhh----ccccCCCCCCCcc---
Confidence 443333445688899999988654 56889999999999999999999997543221111 0001111111111
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 406 KIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 406 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.....+.+++.+||+.||++||++.+++.+
T Consensus 226 ---~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 226 ---GYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred ---cCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 011237789999999999999999998854
No 284
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.2e-37 Score=299.20 Aligned_cols=253 Identities=28% Similarity=0.386 Sum_probs=197.7
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
+.|...+.||+|+||.||+|.. .+++.||+|++...........+.+.+|+++++.++|||++++.++|...+..++|+
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 4588889999999999999975 468999999987544333334567889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+. |++.+.+..... .+++..+..++.|++.||.||| +.+++||||+|+||+++.++.++|+|||++......
T Consensus 95 e~~~-g~l~~~~~~~~~--~l~~~~~~~~~~ql~~~L~~LH---~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~ 168 (307)
T cd06607 95 EYCL-GSASDILEVHKK--PLQEVEIAAICHGALQGLAYLH---SHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA 168 (307)
T ss_pred HhhC-CCHHHHHHHccc--CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEECCCCCEEEeecCcceecCCC
Confidence 9997 577777654332 3899999999999999999999 789999999999999999999999999998765322
Q ss_pred CCCceecccccccccccccc---CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccch
Q 012219 329 SSNRTLLAGTYGYIAPELAY---TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQ 405 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (468)
....++..|+|||++. ...++.++||||||+++|||+||+.||............ .....+.... .
T Consensus 169 ----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~----~~~~~~~~~~---~ 237 (307)
T cd06607 169 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI----AQNDSPTLSS---N 237 (307)
T ss_pred ----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHH----hcCCCCCCCc---h
Confidence 2345788999999874 456888999999999999999999998654321111100 0000111111 1
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 406 KIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 406 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
.....+.+++.+||+.+|++||++.+++.+..-.
T Consensus 238 ---~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~ 271 (307)
T cd06607 238 ---DWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVL 271 (307)
T ss_pred ---hhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhc
Confidence 1112377899999999999999999999765433
No 285
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=6.9e-38 Score=295.67 Aligned_cols=254 Identities=28% Similarity=0.416 Sum_probs=198.7
Q ss_pred HhhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCC---
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRK--- 242 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~--- 242 (468)
++++|++.+.||+|++|.||+|... +++.+++|++...... .+.|.+|+++++++ +|+||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~----~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 79 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDE----EEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPG 79 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchh----HHHHHHHHHHHHHhcCCCChheEEEEEEecCCCC
Confidence 4678999999999999999999764 6789999998765432 35788999999999 6999999999997644
Q ss_pred ---EEEEEEEeccCCChhhhhhcCc-ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEee
Q 012219 243 ---CMFLIYEYMEMGSLFCVLRTDE-EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVAD 318 (468)
Q Consensus 243 ---~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 318 (468)
..++||||+++++|.+++.... ....+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|
T Consensus 80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH---~~~i~H~~l~p~ni~~~~~~~~~l~d 156 (275)
T cd06608 80 NDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLH---ENKVIHRDIKGQNILLTKNAEVKLVD 156 (275)
T ss_pred cceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEEccCCeEEECC
Confidence 4899999999999999886532 2345889999999999999999999 78999999999999999999999999
Q ss_pred ccccccccCCCCCceeccccccccccccccC-----CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccccccc
Q 012219 319 FGVARLLNFDSSNRTLLAGTYGYIAPELAYT-----MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLID 393 (468)
Q Consensus 319 fg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~ 393 (468)
||++..............++..|+|||++.. ..++.++|||||||++|+|++|+.||........... ...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~----~~~ 232 (275)
T cd06608 157 FGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFK----IPR 232 (275)
T ss_pred CccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHH----hhc
Confidence 9998765433333344568889999998753 3467899999999999999999999874332111110 111
Q ss_pred ccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 394 LLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
...+..... . .....+.+++.+||..||++|||+.+++.
T Consensus 233 ~~~~~~~~~--~---~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 233 NPPPTLKSP--E---NWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred cCCCCCCch--h---hcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 111111110 0 11123678999999999999999999975
No 286
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.4e-37 Score=290.75 Aligned_cols=251 Identities=27% Similarity=0.431 Sum_probs=197.6
Q ss_pred ccccceeeeeCCceEEEEEcCC-----CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEE
Q 012219 172 FHIKYCIGTGGYGSVYRARLPS-----GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 172 ~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (468)
+++.+.||+|+||.||++...+ +..||+|++....... ..+.+..|++++..++|+||+++++++...+..++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 78 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQ--QIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMI 78 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChH--HHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEE
Confidence 3567889999999999997643 4889999997654332 35688899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccccc
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLN 326 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 326 (468)
+|||+++++|.+++...... .+++.++..++.|++.||+||| +.+++|+||+|+||+++.++.++|+|||+++...
T Consensus 79 i~e~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh---~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~ 154 (258)
T smart00219 79 VMEYMEGGDLLDYLRKNRPK-ELSLSDLLSFALQIARGMEYLE---SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLY 154 (258)
T ss_pred EEeccCCCCHHHHHHhhhhc-cCCHHHHHHHHHHHHHHHHHHh---cCCeeecccccceEEEccCCeEEEcccCCceecc
Confidence 99999999999998764321 2799999999999999999999 7899999999999999999999999999997764
Q ss_pred CCCCCce-eccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCccc
Q 012219 327 FDSSNRT-LLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVD 404 (468)
Q Consensus 327 ~~~~~~~-~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (468)
....... ...+++.|+|||...+..++.++||||+|+++++|++ |+.||........... ............
T Consensus 155 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~-- 228 (258)
T smart00219 155 DDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEY----LKKGYRLPKPEN-- 228 (258)
T ss_pred cccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH----HhcCCCCCCCCc--
Confidence 3322111 1236789999999988889999999999999999998 8888865322111100 000000011111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 405 QKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 405 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
....+.+++.+|+..+|++|||+.++++.|
T Consensus 229 -----~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 229 -----CPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred -----CCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 112377799999999999999999998754
No 287
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=2.8e-38 Score=295.79 Aligned_cols=250 Identities=26% Similarity=0.334 Sum_probs=200.9
Q ss_pred CccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
+|.+.+.||.|+||.||+|... +++.+|+|.+...........+.+.+|++++++++||||+++++++......++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4778899999999999999764 689999999986544333456789999999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|+.+++|.+++... ..+++..+..++.|+++||.||| ..+++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~l~~~---~~l~~~~~~~~~~~i~~~l~~lh---~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 154 (258)
T cd05578 81 LLLGGDLRYHLSQK---VKFSEEQVKFWICEIVLALEYLH---SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT 154 (258)
T ss_pred CCCCCCHHHHHHhc---CCcCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc
Confidence 99999999999764 34889999999999999999999 7799999999999999999999999999987764322
Q ss_pred CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHH
Q 012219 330 SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQ 409 (468)
Q Consensus 330 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (468)
......|+..|+|||.+.+..++.++||||||+++|+|++|+.||........... ........+......+
T Consensus 155 -~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~----- 226 (258)
T cd05578 155 -LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQI--RAKQETADVLYPATWS----- 226 (258)
T ss_pred -cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHH--HHHhccccccCcccCc-----
Confidence 23345688899999999888899999999999999999999999876543111000 0000001111111111
Q ss_pred HHHHHHHHHHhcccCCCCCCCCH--HHHH
Q 012219 410 DIILVSTVAFSCLRSQPKSRPTM--QLVS 436 (468)
Q Consensus 410 ~~~~l~~l~~~cl~~dP~~RPs~--~~v~ 436 (468)
..+.+++.+||+.||.+||++ +|++
T Consensus 227 --~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 227 --TEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred --HHHHHHHHHHccCChhHcCCccHHHHh
Confidence 236789999999999999999 5554
No 288
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.1e-37 Score=296.53 Aligned_cols=261 Identities=25% Similarity=0.313 Sum_probs=197.7
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee--CCEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH--RKCMFL 246 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~l 246 (468)
++|...+.||.|++|.||++.. .+++.+|+|.+...... .....+.+|++++++++||||+++++++.. ....++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 78 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNP--DLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGI 78 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCch--HHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEE
Confidence 3577889999999999999976 46889999998755432 234678899999999999999999999865 346899
Q ss_pred EEEeccCCChhhhhhcCc-ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccc
Q 012219 247 IYEYMEMGSLFCVLRTDE-EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLL 325 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 325 (468)
||||+++++|.+++.... ....++......++.|++.||+||| +.+++|+||+|+||+++.++.++|+|||++...
T Consensus 79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH---~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~ 155 (287)
T cd06621 79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLH---SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGEL 155 (287)
T ss_pred EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEecCCeEEEeeccccccc
Confidence 999999999998875421 2344788899999999999999999 789999999999999999999999999998755
Q ss_pred cCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccc-hhhhcccccccccCCCCCCccc
Q 012219 326 NFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSS-WSLDKNIKLIDLLDPRLSPPVD 404 (468)
Q Consensus 326 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 404 (468)
.... .....++..|+|||.+.+..++.++||||+|+++|+|++|+.||....... ..............+.+.....
T Consensus 156 ~~~~--~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd06621 156 VNSL--AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPG 233 (287)
T ss_pred cccc--cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCC
Confidence 3221 123457889999999998899999999999999999999999987542210 0000000000100111111100
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 405 QKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 405 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.. ......+.+++.+||+.+|++|||+.|++.+
T Consensus 234 ~~-~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 234 NG-IKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred CC-CchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 00 0111237789999999999999999999863
No 289
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=4.9e-38 Score=300.28 Aligned_cols=245 Identities=27% Similarity=0.397 Sum_probs=194.7
Q ss_pred cceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEeccC
Q 012219 175 KYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYMEM 253 (468)
Q Consensus 175 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 253 (468)
...||+|+||.||++.. .+++.||+|.+...... ..+.+.+|+.++..++|||++++++++...+..++++||+++
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~---~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~ 102 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQ---RRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQG 102 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccc---hHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCC
Confidence 44699999999999975 47899999998654332 235678999999999999999999999999999999999999
Q ss_pred CChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCce
Q 012219 254 GSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRT 333 (468)
Q Consensus 254 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 333 (468)
++|..++.. ..+++..++.++.|++.||+||| +.+++||||||+||+++.++.++|+|||++...........
T Consensus 103 ~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~ 175 (297)
T cd06659 103 GALTDIVSQ----TRLNEEQIATVCESVLQALCYLH---SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRK 175 (297)
T ss_pred CCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHeEEccCCcEEEeechhHhhccccccccc
Confidence 999988754 23789999999999999999999 78999999999999999999999999999976544333334
Q ss_pred eccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHH
Q 012219 334 LLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIIL 413 (468)
Q Consensus 334 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (468)
...++..|+|||++.+..++.++|||||||++|||++|+.||........... ......+..... ... ...
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~--~~~---~~~ 246 (297)
T cd06659 176 SLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR----LRDSPPPKLKNA--HKI---SPV 246 (297)
T ss_pred ceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HhccCCCCcccc--CCC---CHH
Confidence 45688999999999988899999999999999999999999864332111100 000000000000 000 112
Q ss_pred HHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 414 VSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 414 l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
+.+++.+|++.+|++||++++++.+
T Consensus 247 l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 247 LRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred HHHHHHHHhcCCcccCcCHHHHhhC
Confidence 6678999999999999999999974
No 290
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-39 Score=316.40 Aligned_cols=257 Identities=26% Similarity=0.437 Sum_probs=208.3
Q ss_pred ccccceeeeeCCceEEEEE-cCCC----CEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEE
Q 012219 172 FHIKYCIGTGGYGSVYRAR-LPSG----KVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 172 ~~~~~~lg~G~~g~Vy~~~-~~~~----~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (468)
....++||+|+||+||+|. .++| -+||+|++...... ...+++.+|+-.|.+++|||+++++|+|.... ..|
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~--~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~ql 774 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSP--KASIELLDEALRMASLDHPNLLRLLGVCMLST-LQL 774 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCc--hhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHH
Confidence 3446789999999999995 4444 46899988765443 34578999999999999999999999998776 789
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccccc
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLN 326 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 326 (468)
|++||+.|+|.++++.++.. +.....+.|..|||+|+.||| .+++|||||.++|||+..-..+||.|||+++.+.
T Consensus 775 vtq~mP~G~LlDyvr~hr~~--igsq~lLnw~~QIAkgM~YLe---~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~ 849 (1177)
T KOG1025|consen 775 VTQLMPLGCLLDYVREHRDN--IGSQDLLNWCYQIAKGMKYLE---EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLA 849 (1177)
T ss_pred HHHhcccchHHHHHHHhhcc--ccHHHHHHHHHHHHHHHHHHH---hcchhhhhhhhhheeecCCCeEEEEecchhhccC
Confidence 99999999999999986554 777889999999999999999 8899999999999999999999999999999987
Q ss_pred CCCCCceecc--ccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCCCCcc
Q 012219 327 FDSSNRTLLA--GTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPV 403 (468)
Q Consensus 327 ~~~~~~~~~~--g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (468)
.+........ -.+.|||=|.+....|+.++|||||||.+||++| |..|++.++..... ...+.-+. +..+.
T Consensus 850 ~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~-----dlle~geR-LsqPp 923 (1177)
T KOG1025|consen 850 PDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIP-----DLLEKGER-LSQPP 923 (1177)
T ss_pred cccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhh-----HHHhcccc-CCCCC
Confidence 6655544433 3568999999999999999999999999999999 99999876643221 11111111 22211
Q ss_pred chhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCCCC
Q 012219 404 DQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKAPM 447 (468)
Q Consensus 404 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~~~ 447 (468)
. ...-+..++.+||..|+..||+++++.+.|.++...|.
T Consensus 924 i-----CtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardpq 962 (1177)
T KOG1025|consen 924 I-----CTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDPQ 962 (1177)
T ss_pred C-----ccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCcc
Confidence 1 11226678899999999999999999999998876543
No 291
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=4.3e-38 Score=298.83 Aligned_cols=262 Identities=23% Similarity=0.280 Sum_probs=195.6
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
+|+..+.||+|++|.||+|+. .+++.||+|++....... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 79 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE-GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 79 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccccc-ccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEee
Confidence 477889999999999999975 468999999887543221 223568899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|+. ++|.+++..... ..+++..+..++.|++.||+||| +.+++|+||+|+||+++.++.+||+|||+++......
T Consensus 80 ~~~-~~l~~~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lh---~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~ 154 (284)
T cd07860 80 FLH-QDLKKFMDASPL-SGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 154 (284)
T ss_pred ccc-cCHHHHHHhCCC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc
Confidence 996 689888865432 34899999999999999999999 7899999999999999999999999999997664333
Q ss_pred CCceeccccccccccccccCCC-CCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccc---cccc------------
Q 012219 330 SNRTLLAGTYGYIAPELAYTMV-VTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNI---KLID------------ 393 (468)
Q Consensus 330 ~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~---~~~~------------ 393 (468)
.......++..|+|||+..+.. ++.++||||||+++|||+||+.||.............. ....
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07860 155 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDY 234 (284)
T ss_pred cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHH
Confidence 3333345688999999887644 68899999999999999999999864332111000000 0000
Q ss_pred --ccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 394 --LLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 394 --~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
....................+.+++.+|++.||++|||+++++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 235 KPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred HhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 000000000000000001236679999999999999999998853
No 292
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=2.8e-38 Score=295.82 Aligned_cols=239 Identities=23% Similarity=0.381 Sum_probs=185.9
Q ss_pred ceeeeeCCceEEEEEcCC--------CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 176 YCIGTGGYGSVYRARLPS--------GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
+.||+|+||.||+|.... ...+++|.+..... ...+.|.+|+.+++.++|||++++++++......++|
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv 77 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHR---NYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMV 77 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhH---HHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEE
Confidence 358999999999996532 23488888754332 2346788999999999999999999999998889999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCC--------eEEeec
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELE--------AFVADF 319 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~--------~kl~Df 319 (468)
|||+++|+|.++++.... .+++..++.++.||+.||+||| +.+|+||||||+||+++.++. ++++||
T Consensus 78 ~e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~qi~~~l~~lH---~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~ 152 (258)
T cd05078 78 QEYVKFGSLDTYLKKNKN--LINISWKLEVAKQLAWALHFLE---DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDP 152 (258)
T ss_pred EecCCCCcHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEEecccccccCCCceEEeccc
Confidence 999999999999976543 4789999999999999999999 789999999999999988765 589999
Q ss_pred cccccccCCCCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCC-CCCCcccccchhhhcccccccccCC
Q 012219 320 GVARLLNFDSSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGK-HPGELLSSSSWSLDKNIKLIDLLDP 397 (468)
Q Consensus 320 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~-~p~~~~~~~~~~~~~~~~~~~~~~~ 397 (468)
|++..... .....++..|+|||++.+ ..++.++|||||||++|||++|. .|+............ .. ..
T Consensus 153 g~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~~~-~~-----~~ 222 (258)
T cd05078 153 GISITVLP----KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQFY-ED-----RH 222 (258)
T ss_pred ccccccCC----chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHHHH-Hc-----cc
Confidence 98865432 223457889999999876 45789999999999999999985 665543321111000 00 11
Q ss_pred CCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 398 RLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 398 ~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
.+..... ..+.+++.+||+.||++|||++++++.|
T Consensus 223 ~~~~~~~-------~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 223 QLPAPKW-------TELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred cCCCCCc-------HHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 1111111 1267899999999999999999999876
No 293
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.5e-37 Score=295.52 Aligned_cols=253 Identities=28% Similarity=0.415 Sum_probs=202.9
Q ss_pred HhhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEE
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (468)
.++.|+..+.||+|++|.||+|... +++.+++|++..... ..+.+.+|+++++.++|+|++++++++......++
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 92 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ----NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWV 92 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch----hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEE
Confidence 3456888889999999999999765 688999999976543 24578899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccccc
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLN 326 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 326 (468)
++||+++++|.+++.... ..+++..++.++.|++.||+||| +.+++|+||+|+||+++.++.++|+|||++....
T Consensus 93 v~e~~~~~~L~~~l~~~~--~~l~~~~~~~i~~~i~~~L~~lH---~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 167 (286)
T cd06614 93 VMEYMDGGSLTDIITQNF--VRMNEPQIAYVCREVLQGLEYLH---SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLT 167 (286)
T ss_pred EEeccCCCcHHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCChhhEEEcCCCCEEECccchhhhhc
Confidence 999999999999998654 34899999999999999999999 7899999999999999999999999999987654
Q ss_pred CCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchh
Q 012219 327 FDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQK 406 (468)
Q Consensus 327 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (468)
..........++..|+|||.+.+..++.++||||||+++|+|++|+.||............. .... +..... ..
T Consensus 168 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~---~~~~-~~~~~~--~~ 241 (286)
T cd06614 168 KEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLIT---TKGI-PPLKNP--EK 241 (286)
T ss_pred cchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---hcCC-CCCcch--hh
Confidence 33323333457889999999988889999999999999999999999987543221111000 0000 001110 00
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
. ...+.+++.+|++.+|.+||++.+++++
T Consensus 242 ~---~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 242 W---SPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred C---CHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 1 1236779999999999999999999853
No 294
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-39 Score=310.59 Aligned_cols=250 Identities=26% Similarity=0.402 Sum_probs=201.9
Q ss_pred ceeeeeCCceEEEEEcCC-CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEeccCC
Q 012219 176 YCIGTGGYGSVYRARLPS-GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYMEMG 254 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 254 (468)
-.||+|.||+||.|+..+ ...+|||-+...... ..+-+.+|+.+-++++|.|||+++|.|.+++..-|.||-++||
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr---~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGG 657 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSR---EVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGG 657 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccch---hhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCC
Confidence 369999999999998654 567899998765543 2456789999999999999999999999999999999999999
Q ss_pred ChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeC-CCCCeEEeeccccccccCCCCCce
Q 012219 255 SLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLN-SELEAFVADFGVARLLNFDSSNRT 333 (468)
Q Consensus 255 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~-~~~~~kl~Dfg~~~~~~~~~~~~~ 333 (468)
||.++++..=....-.+...-.+..||++||.||| ...|||||||-.|||++ -.|.+||+|||-++.+..-.....
T Consensus 658 SLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLH---en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TE 734 (1226)
T KOG4279|consen 658 SLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLH---ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTE 734 (1226)
T ss_pred cHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhh---hcceeeccccCCcEEEeeccceEEecccccchhhccCCcccc
Confidence 99999987544333366677778899999999999 77899999999999995 568999999999998876666667
Q ss_pred eccccccccccccccCC--CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHH
Q 012219 334 LLAGTYGYIAPELAYTM--VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDI 411 (468)
Q Consensus 334 ~~~g~~~y~aPE~~~~~--~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (468)
.+.||..|||||++..+ .|+.++|||||||.+.||.||++||..+........+.. . ....++.+....
T Consensus 735 TFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVG-m-----yKvHP~iPeels--- 805 (1226)
T KOG4279|consen 735 TFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVG-M-----YKVHPPIPEELS--- 805 (1226)
T ss_pred ccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhc-c-----eecCCCCcHHHH---
Confidence 78899999999999865 589999999999999999999999987665433222110 0 112233333222
Q ss_pred HHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 012219 412 ILVSTVAFSCLRSQPKSRPTMQLVSNEFI 440 (468)
Q Consensus 412 ~~l~~l~~~cl~~dP~~RPs~~~v~~~l~ 440 (468)
.+...++.+|..+||.+||++.+++..-+
T Consensus 806 aeak~FilrcFepd~~~R~sA~~LL~DpF 834 (1226)
T KOG4279|consen 806 AEAKNFILRCFEPDPCDRPSAKDLLQDPF 834 (1226)
T ss_pred HHHHHHHHHHcCCCcccCccHHHhccCcc
Confidence 23567899999999999999999985443
No 295
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.7e-37 Score=292.91 Aligned_cols=256 Identities=27% Similarity=0.405 Sum_probs=195.8
Q ss_pred ccccceeeeeCCceEEEEEcC----CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC-----
Q 012219 172 FHIKYCIGTGGYGSVYRARLP----SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK----- 242 (468)
Q Consensus 172 ~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 242 (468)
|.+.+.||+|+||.||+|.+. .++.||+|++....... ...+++.+|++++++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 79 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSS-SDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRL 79 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCCh-HHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcc
Confidence 556788999999999999743 46889999997654322 23567889999999999999999999886532
Q ss_pred -EEEEEEEeccCCChhhhhhcC---cccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEee
Q 012219 243 -CMFLIYEYMEMGSLFCVLRTD---EEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVAD 318 (468)
Q Consensus 243 -~~~lv~e~~~~gsL~~~l~~~---~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~D 318 (468)
..++++||+.+|+|.+++... .....+++...+.++.|++.||+||| +.+|+||||||+||+++.++.+||+|
T Consensus 80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~nili~~~~~~kl~d 156 (273)
T cd05074 80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLS---SKNFIHRDLAARNCMLNENMTVCVAD 156 (273)
T ss_pred cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCEeecccchhhEEEcCCCCEEECc
Confidence 247889999999998887532 12234788999999999999999999 78999999999999999999999999
Q ss_pred ccccccccCCCC--CceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhccccccccc
Q 012219 319 FGVARLLNFDSS--NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLL 395 (468)
Q Consensus 319 fg~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 395 (468)
||+++....... ......++..|++||.+....++.++|||||||++|||++ |+.||........... .....
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~----~~~~~ 232 (273)
T cd05074 157 FGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNY----LIKGN 232 (273)
T ss_pred ccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHH----HHcCC
Confidence 999986532221 1122335678999999988889999999999999999999 8899865432111000 00000
Q ss_pred CCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 396 DPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
........ ...+.+++.+|++.+|++||++.+++..|+.+
T Consensus 233 ~~~~~~~~-------~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 233 RLKQPPDC-------LEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred cCCCCCCC-------CHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11111111 12377899999999999999999999999764
No 296
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=2.6e-37 Score=292.47 Aligned_cols=247 Identities=23% Similarity=0.308 Sum_probs=192.5
Q ss_pred eeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEeccCCCh
Q 012219 178 IGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYMEMGSL 256 (468)
Q Consensus 178 lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 256 (468)
||+|+||+||++.. .+|+.+|+|.+...........+.+..|++++++++|||++++++++...+..++|+||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 68999999999964 46899999998764433333445677899999999999999999999999999999999999999
Q ss_pred hhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCceecc
Q 012219 257 FCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRTLLA 336 (468)
Q Consensus 257 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 336 (468)
.+++..... ..+++.++..++.|++.||.||| ..+++||||+|+||+++.++.++|+|||.+..... ........
T Consensus 81 ~~~l~~~~~-~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~-~~~~~~~~ 155 (277)
T cd05577 81 KYHIYNVGE-PGFPEARAIFYAAQIICGLEHLH---QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKG-GKKIKGRA 155 (277)
T ss_pred HHHHHHcCc-CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEECCCCCEEEccCcchhhhcc-CCcccccc
Confidence 999876543 34899999999999999999999 78999999999999999999999999999876543 22223345
Q ss_pred ccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHHHH
Q 012219 337 GTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVST 416 (468)
Q Consensus 337 g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 416 (468)
++..|+|||+..+..++.++|||||||++|+|++|+.||...........-...... .........+ ..+.+
T Consensus 156 ~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-------~~~~~ 227 (277)
T cd05577 156 GTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLE-MAVEYPDKFS-------PEAKD 227 (277)
T ss_pred CCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcccc-ccccCCccCC-------HHHHH
Confidence 788999999998888999999999999999999999998654321110000000000 0111111111 12667
Q ss_pred HHHhcccCCCCCCC-----CHHHHHH
Q 012219 417 VAFSCLRSQPKSRP-----TMQLVSN 437 (468)
Q Consensus 417 l~~~cl~~dP~~RP-----s~~~v~~ 437 (468)
++.+||+.||++|| ++.+++.
T Consensus 228 li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 228 LCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred HHHHHccCChhHccCCCcccHHHHHh
Confidence 99999999999999 6666664
No 297
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.5e-37 Score=295.15 Aligned_cols=261 Identities=23% Similarity=0.312 Sum_probs=198.0
Q ss_pred CccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
+|+..+.||+|++|.||+|+.. +|+.||+|++...... ...+.+.+|++++++++|+||+++++++...+..++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 78 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE--GTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFE 78 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc--cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEe
Confidence 4778899999999999999864 6889999999765432 223567789999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|+++ +|.+++........+++..+..++.|++.||.||| +.+++||||||+||++++++.++++|||++.......
T Consensus 79 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~ 154 (284)
T cd07836 79 YMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCH---ENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV 154 (284)
T ss_pred cCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc
Confidence 9985 88888876554455899999999999999999999 7799999999999999999999999999997654333
Q ss_pred CCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhc-----------ccccc--ccc
Q 012219 330 SNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDK-----------NIKLI--DLL 395 (468)
Q Consensus 330 ~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~-----------~~~~~--~~~ 395 (468)
.......++..|+|||++.+ ..++.++|||||||++|+|++|+.||............ ..... ...
T Consensus 155 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07836 155 NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEY 234 (284)
T ss_pred cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchh
Confidence 33333457889999998765 45788999999999999999999998754322110000 00000 000
Q ss_pred CCCCCCccchh----HHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 396 DPRLSPPVDQK----IRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 396 ~~~~~~~~~~~----~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
........... .......+.+++.+|++.||.+||++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 235 KPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred cccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00000000000 0011123678999999999999999999875
No 298
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=2.8e-37 Score=293.42 Aligned_cols=252 Identities=26% Similarity=0.371 Sum_probs=199.0
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
.|...+.||+|++|.||++.. .+++.+++|++...... ..+.+.+|+.+++.++|+|++++++++...+..++++|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e 96 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVME 96 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchh---HHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEe
Confidence 344457899999999999974 57889999998654332 23567899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|+++++|.+++.. ..+++.++..++.|++.||+||| +.+++||||+|+||+++.++.++|+|||.+.......
T Consensus 97 ~~~~~~L~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~ 169 (285)
T cd06648 97 FLEGGALTDIVTH----TRMNEEQIATVCLAVLKALSFLH---AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV 169 (285)
T ss_pred ccCCCCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChhhEEEcCCCcEEEcccccchhhccCC
Confidence 9999999999875 23789999999999999999999 7899999999999999999999999999887654333
Q ss_pred CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHH
Q 012219 330 SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQ 409 (468)
Q Consensus 330 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (468)
.......|+..|+|||...+..++.++||||||+++|||++|+.||.......... .......+..... . .
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~----~~~~~~~~~~~~~-~----~ 240 (285)
T cd06648 170 PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMK----RIRDNLPPKLKNL-H----K 240 (285)
T ss_pred cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHH----HHHhcCCCCCccc-c----c
Confidence 33334568899999999988889999999999999999999999986533211110 0111111111111 0 0
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHH-HHHh
Q 012219 410 DIILVSTVAFSCLRSQPKSRPTMQLVSN-EFIA 441 (468)
Q Consensus 410 ~~~~l~~l~~~cl~~dP~~RPs~~~v~~-~l~~ 441 (468)
....+.+++.+||+.+|++||++.++++ .|.+
T Consensus 241 ~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~ 273 (285)
T cd06648 241 VSPRLRSFLDRMLVRDPAQRATAAELLNHPFLA 273 (285)
T ss_pred CCHHHHHHHHHHcccChhhCcCHHHHccCcccc
Confidence 1123778999999999999999999995 4443
No 299
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.5e-37 Score=296.46 Aligned_cols=260 Identities=24% Similarity=0.252 Sum_probs=196.5
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC--CEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR--KCMFL 246 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l 246 (468)
++|++.+.||+|+||.||+|... +++.+++|.++...... .....+.+|++++.+++||||+++++++... ...++
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~l 83 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKE-GFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYM 83 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccc-cchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence 56888899999999999999765 68899999997554332 2234567899999999999999999998877 88999
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccccc
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLN 326 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 326 (468)
|+||++ ++|.+++..... .+++..++.++.||+.||+||| +.+++|+||||+||+++.++.++|+|||++....
T Consensus 84 v~e~~~-~~L~~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 157 (293)
T cd07843 84 VMEYVE-HDLKSLMETMKQ--PFLQSEVKCLMLQLLSGVAHLH---DNWILHRDLKTSNLLLNNRGILKICDFGLAREYG 157 (293)
T ss_pred EehhcC-cCHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCcEEEeecCceeecc
Confidence 999997 489888875432 4899999999999999999999 7799999999999999999999999999998765
Q ss_pred CCCCCceeccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhh-------------------
Q 012219 327 FDSSNRTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLD------------------- 386 (468)
Q Consensus 327 ~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~------------------- 386 (468)
..........+++.|+|||.+.+. .++.++||||||+++|||++|+.||...........
T Consensus 158 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (293)
T cd07843 158 SPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSEL 237 (293)
T ss_pred CCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhcc
Confidence 433333344578899999988754 468899999999999999999999864332110000
Q ss_pred ---cccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 387 ---KNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 387 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
............+....... .....+.+++.+||+.+|++|||+.|++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 238 PGAKKKTFTKYPYNQLRKKFPAL--SLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred chhcccccccccchhhhcccccc--CCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 00000000000000001100 001236689999999999999999999853
No 300
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-38 Score=296.33 Aligned_cols=249 Identities=25% Similarity=0.394 Sum_probs=206.2
Q ss_pred hCccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
.-|.+.+.||+|.|..|-.++ .-.|..||||++.+.+..+.. ...+.+|++.|+-++|||||++|++......+|||.
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~s-t~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL 96 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLS-TGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL 96 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhh-hhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence 457778889999999999996 458999999999988766543 356779999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee-CCCCCeEEeeccccccccC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLL-NSELEAFVADFGVARLLNF 327 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll-~~~~~~kl~Dfg~~~~~~~ 327 (468)
|.=++|+|++++-+.... +.+....+++.||..|+.|+| ...+|||||||+||.+ ..-|-|||+|||++..+.
T Consensus 97 ELGD~GDl~DyImKHe~G--l~E~La~kYF~QI~~AI~YCH---qLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~- 170 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMKHEEG--LNEDLAKKYFAQIVHAISYCH---QLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ- 170 (864)
T ss_pred EecCCchHHHHHHhhhcc--ccHHHHHHHHHHHHHHHHHHh---hhhhhcccCCcceeEEeeecCceEeeeccccccCC-
Confidence 999999999999876654 888889999999999999999 6689999999999866 455899999999998775
Q ss_pred CCCCceeccccccccccccccCCCCCc-cchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchh
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTMVVTE-KCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQK 406 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~~~~~-~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (468)
++......+|+..|-|||++.+..|+. ++||||+|||||-|++|++||+..... .-+.-++|-.+..+ ..
T Consensus 171 PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS-------ETLTmImDCKYtvP--sh 241 (864)
T KOG4717|consen 171 PGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS-------ETLTMIMDCKYTVP--SH 241 (864)
T ss_pred CcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch-------hhhhhhhcccccCc--hh
Confidence 445566779999999999999988874 789999999999999999999854432 11222333333221 22
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
.. .++.++|.+||..||++|-+.++++.
T Consensus 242 vS---~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 242 VS---KECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred hh---HHHHHHHHHHHhcCchhhccHHHHhc
Confidence 22 23778999999999999999999983
No 301
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=8.8e-38 Score=296.56 Aligned_cols=261 Identities=23% Similarity=0.302 Sum_probs=195.3
Q ss_pred ccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEe
Q 012219 172 FHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEY 250 (468)
Q Consensus 172 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (468)
|++.+.||+|++|.||+|.. .+|+.||+|++....... .....+.+|+++++.++|+|++++++++...+..++++||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~ 79 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDE-GVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEF 79 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccc-cchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEec
Confidence 56678899999999999975 479999999987553221 2235678899999999999999999999999999999999
Q ss_pred ccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCC
Q 012219 251 MEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSS 330 (468)
Q Consensus 251 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 330 (468)
++ ++|.+++..... ..+++..++.++.|++.||+||| +.+++||||+|+||+++.++.++|+|||+++.......
T Consensus 80 ~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~i~~~L~~lH---~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~ 154 (283)
T cd07835 80 LD-LDLKKYMDSSPL-TGLDPPLIKSYLYQLLQGIAYCH---SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR 154 (283)
T ss_pred cC-cCHHHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc
Confidence 95 689998876442 34899999999999999999999 77999999999999999999999999999976543332
Q ss_pred CceeccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcc--------------ccccccc
Q 012219 331 NRTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKN--------------IKLIDLL 395 (468)
Q Consensus 331 ~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~--------------~~~~~~~ 395 (468)
......++..|+|||++.+. .++.++||||||+++|+|++|+.||............. ....+..
T Consensus 155 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (283)
T cd07835 155 TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYK 234 (283)
T ss_pred ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhh
Confidence 22334568899999987654 57889999999999999999999986433211000000 0000000
Q ss_pred C--CCCC-CccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 396 D--PRLS-PPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 396 ~--~~~~-~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
. +... .............+.+++.+|++.||++|||+++++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 235 PTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred hhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0 0000 00000000011236789999999999999999999853
No 302
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=5.2e-37 Score=285.55 Aligned_cols=250 Identities=32% Similarity=0.468 Sum_probs=201.9
Q ss_pred CccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
+|+..+.||+|++|.||++... +++.+++|++..... ...+.+.+|+++++.++|+|++++++++......++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e 77 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK---EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVME 77 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch---hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEe
Confidence 4677889999999999999764 688999999977654 234678899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|+++++|.+++.... ..+++..+..++.|++.||.+|| ..+++||||+|+||+++.++.++|+|||.+.......
T Consensus 78 ~~~~~~L~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh---~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 152 (253)
T cd05122 78 FCSGGSLKDLLKSTN--QTLTESQIAYVCKELLKGLEYLH---SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTK 152 (253)
T ss_pred cCCCCcHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHhh---cCCEecCCCCHHHEEEccCCeEEEeeccccccccccc
Confidence 999999999987643 34899999999999999999999 7899999999999999999999999999997765432
Q ss_pred CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHH
Q 012219 330 SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQ 409 (468)
Q Consensus 330 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (468)
. .....++..|+|||.+.+..++.++||||||+++|+|++|+.||.............. ...+...... .
T Consensus 153 ~-~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~----~~~~~~~~~~--~--- 222 (253)
T cd05122 153 A-RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT----NGPPGLRNPE--K--- 222 (253)
T ss_pred c-ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh----cCCCCcCccc--c---
Confidence 2 3345688899999999888899999999999999999999999875532211111100 0001111110 0
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 410 DIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 410 ~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
....+.+++.+|++.||++|||+.+++.+
T Consensus 223 ~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 223 WSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred cCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 01237789999999999999999998753
No 303
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.9e-37 Score=294.65 Aligned_cols=261 Identities=25% Similarity=0.290 Sum_probs=198.3
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
+|.+.+.||+|++|.||+|.. .+|+.||+|++....... ...+.+.+|+.++++++|+|++++++++......++|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~-~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e 79 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEG-GIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVME 79 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccc-hhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEec
Confidence 477889999999999999975 478999999997654322 234678899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|+ +++|.+++.... ..+++.+++.++.||+.||+||| +.+++|+||||+||+++.++.++|+|||++.......
T Consensus 80 ~~-~~~L~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (286)
T cd07832 80 YM-PSDLSEVLRDEE--RPLPEAQVKSYMRMLLKGVAYMH---ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEE 153 (286)
T ss_pred cc-CCCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCC
Confidence 99 999999987543 34899999999999999999999 7899999999999999999999999999998764332
Q ss_pred C-CceeccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCCcccccchh---hhccc--------------c
Q 012219 330 S-NRTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWS---LDKNI--------------K 390 (468)
Q Consensus 330 ~-~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~---~~~~~--------------~ 390 (468)
. ......++..|+|||++.+. .++.++||||+|+++|||+||++||......... ..... .
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07832 154 PRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPD 233 (286)
T ss_pred CCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcch
Confidence 1 12334688899999988654 4688999999999999999998887543211000 00000 0
Q ss_pred cccccCCCC-CCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 391 LIDLLDPRL-SPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 391 ~~~~~~~~~-~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
......+.. .........+....+.+++.+|++.+|++||++++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 234 YNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred hhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000000 000000000112347889999999999999999999864
No 304
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=2.8e-37 Score=293.05 Aligned_cols=256 Identities=23% Similarity=0.406 Sum_probs=192.9
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHH-HhhccCCceeeEEEEEeeCCEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARL-LSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
++|++.+.||+|+||.||++.. .+|+.||+|++....... ....+..|+.. ++.++|||++++++++...+..+++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv 78 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQ--EQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC 78 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcH--HHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence 3688899999999999999975 469999999987653322 12345556654 5667899999999999999999999
Q ss_pred EEeccCCChhhhhhcC-cccCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEecCCCCCceeeCCCCCeEEeeccccccc
Q 012219 248 YEYMEMGSLFCVLRTD-EEAVGLDWAKRVNVVKGMCHALSYLHHDCTP-PIVHRDISSNNVLLNSELEAFVADFGVARLL 325 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~-~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 325 (468)
+||++ |+|.+++... .....+++..++.++.||+.||+||| +. +++||||||+||+++.++.+||+|||++...
T Consensus 79 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~ 154 (283)
T cd06617 79 MEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLH---SKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYL 154 (283)
T ss_pred hhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---hcCCeecCCCCHHHEEECCCCCEEEeeccccccc
Confidence 99997 6888877542 22345899999999999999999999 54 8999999999999999999999999999765
Q ss_pred cCCCCCceeccccccccccccccC----CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 326 NFDSSNRTLLAGTYGYIAPELAYT----MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 326 ~~~~~~~~~~~g~~~y~aPE~~~~----~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
... .......++..|+|||.+.+ ..++.++|||||||++|||++|+.||........... .......+....
T Consensus 155 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~ 230 (283)
T cd06617 155 VDS-VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLK---QVVEEPSPQLPA 230 (283)
T ss_pred ccc-cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHH---HHHhcCCCCCCc
Confidence 322 22233467889999998864 4568899999999999999999999864332111111 111111111111
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH-HHHh
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN-EFIA 441 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~-~l~~ 441 (468)
. ... ..+.+++.+||..+|++||++.++++ .|..
T Consensus 231 ~---~~~---~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~ 265 (283)
T cd06617 231 E---KFS---PEFQDFVNKCLKKNYKERPNYPELLQHPFFE 265 (283)
T ss_pred c---ccC---HHHHHHHHHHccCChhhCcCHHHHhcCchhh
Confidence 1 111 12677999999999999999999984 4443
No 305
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=7.3e-37 Score=295.04 Aligned_cols=254 Identities=27% Similarity=0.393 Sum_probs=197.7
Q ss_pred ccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEe
Q 012219 172 FHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEY 250 (468)
Q Consensus 172 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (468)
|...+.||+|+||.||+|+. .++..+|+|.+...........+.+.+|++++++++|+|++++++++......++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 66778899999999999975 46889999998755433333456788999999999999999999999999999999999
Q ss_pred ccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCC
Q 012219 251 MEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSS 330 (468)
Q Consensus 251 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 330 (468)
+. |++.+.+.... ..+++.++..++.|++.|+.||| +.+++||||+|+||+++.++.++|+|||++.....
T Consensus 107 ~~-g~l~~~~~~~~--~~l~~~~~~~i~~~i~~~l~~lH---~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~--- 177 (317)
T cd06635 107 CL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP--- 177 (317)
T ss_pred CC-CCHHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcccEEECCCCCEEEecCCCccccCC---
Confidence 97 57877775432 34899999999999999999999 78999999999999999999999999999865432
Q ss_pred Cceecccccccccccccc---CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 331 NRTLLAGTYGYIAPELAY---TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 331 ~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
.....++..|+|||++. ...++.++|||||||++|||++|+.||........... ......+.... ..
T Consensus 178 -~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~---~~- 248 (317)
T cd06635 178 -ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH----IAQNESPTLQS---NE- 248 (317)
T ss_pred -cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHH----HHhccCCCCCC---cc-
Confidence 22345788999999874 45688999999999999999999999865322111110 00000011111 11
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
....+.+++.+|++.+|.+||++.+++++.......
T Consensus 249 --~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 284 (317)
T cd06635 249 --WSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRER 284 (317)
T ss_pred --ccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccC
Confidence 112367899999999999999999999876654433
No 306
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=2.3e-37 Score=290.34 Aligned_cols=245 Identities=25% Similarity=0.363 Sum_probs=194.6
Q ss_pred eeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEeccCCCh
Q 012219 178 IGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYMEMGSL 256 (468)
Q Consensus 178 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 256 (468)
||.|++|.||+++.. +++.+|+|++...........+.+.+|+++++.++||||+++++++.+++..++++||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999764 5899999999765544334457799999999999999999999999999999999999999999
Q ss_pred hhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCceecc
Q 012219 257 FCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRTLLA 336 (468)
Q Consensus 257 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 336 (468)
.+++.... .+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||+++...... ......
T Consensus 81 ~~~l~~~~---~l~~~~~~~~~~~i~~~l~~lH---~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~-~~~~~~ 153 (262)
T cd05572 81 WTILRDRG---LFDEYTARFYIACVVLAFEYLH---NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ-KTWTFC 153 (262)
T ss_pred HHHHhhcC---CCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-cccccc
Confidence 99997643 2788999999999999999999 7899999999999999999999999999998764322 223346
Q ss_pred ccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHHHH
Q 012219 337 GTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVST 416 (468)
Q Consensus 337 g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 416 (468)
++..|+|||.+....++.++|+||||+++|+|++|+.||............ ...+........... ...+.+
T Consensus 154 ~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~---~~~~~~ 225 (262)
T cd05572 154 GTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYN-----DILKGNGKLEFPNYI---DKAAKD 225 (262)
T ss_pred CCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHH-----HHhccCCCCCCCccc---CHHHHH
Confidence 788999999998888999999999999999999999998754421111110 011000001111111 123778
Q ss_pred HHHhcccCCCCCCCC-----HHHHHH
Q 012219 417 VAFSCLRSQPKSRPT-----MQLVSN 437 (468)
Q Consensus 417 l~~~cl~~dP~~RPs-----~~~v~~ 437 (468)
++.+||+.+|++||+ +.|+++
T Consensus 226 ~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 226 LIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred HHHHHccCChhhCcCCcccCHHHHhc
Confidence 999999999999999 666664
No 307
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=6.8e-37 Score=285.97 Aligned_cols=252 Identities=29% Similarity=0.401 Sum_probs=203.1
Q ss_pred CccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC--CEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR--KCMFLI 247 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv 247 (468)
+|...+.||+|++|.||+|... +++.|++|++...... ....+.+.+|++.+++++|+||+++++++... ...+++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv 79 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS-EEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF 79 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc-hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence 4677889999999999999765 7899999999766532 23457888999999999999999999999988 889999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
+||+++++|.+++.... .+++..++.++.|++.||+||| +.+++|+||+|+||+++.++.++|+|||.+.....
T Consensus 80 ~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lh---~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 153 (260)
T cd06606 80 LEYVSGGSLSSLLKKFG---KLPEPVIRKYTRQILEGLAYLH---SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGD 153 (260)
T ss_pred EEecCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEcCCCCEEEcccccEEeccc
Confidence 99999999999997654 4899999999999999999999 78999999999999999999999999999987654
Q ss_pred CCC--CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccch
Q 012219 328 DSS--NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQ 405 (468)
Q Consensus 328 ~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (468)
... ......++..|+|||.......+.++||||||+++++|++|+.||............... ....+.+....
T Consensus 154 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~-- 229 (260)
T cd06606 154 IETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGS--SGEPPEIPEHL-- 229 (260)
T ss_pred ccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccc--cCCCcCCCccc--
Confidence 332 133456888999999998888999999999999999999999998765421111111000 00001111111
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 406 KIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 406 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
...+.+++.+|++.+|++||++.+++.+
T Consensus 230 -----~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 230 -----SEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred -----CHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 1237789999999999999999999853
No 308
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=2e-37 Score=294.86 Aligned_cols=256 Identities=24% Similarity=0.302 Sum_probs=192.1
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CCceeeEEEEEeeCCEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIR-HRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 248 (468)
+|...+.||+|+||.||++.. .+++.+|+|.+...... .....+.+|+.++.++. |+||+++++++..+...++++
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~ 82 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE--KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICM 82 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh--HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEE
Confidence 455667899999999999975 46899999998755433 23467889999999996 999999999999988999999
Q ss_pred EeccCCChhhhhhc--CcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccccc
Q 012219 249 EYMEMGSLFCVLRT--DEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLN 326 (468)
Q Consensus 249 e~~~~gsL~~~l~~--~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 326 (468)
||+.. ++.++... ......+++..+..++.+++.||+|||+ ..+++||||||+||+++.++.++|+|||+++...
T Consensus 83 e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~--~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 159 (288)
T cd06616 83 ELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE--ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLV 159 (288)
T ss_pred ecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence 99864 55544321 1112348899999999999999999994 3589999999999999999999999999997654
Q ss_pred CCCCCceeccccccccccccccCC---CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCcc
Q 012219 327 FDSSNRTLLAGTYGYIAPELAYTM---VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPV 403 (468)
Q Consensus 327 ~~~~~~~~~~g~~~y~aPE~~~~~---~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (468)
... ......|+..|+|||++... .++.++|||||||++|||++|+.||........... .......+.+....
T Consensus 160 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~ 235 (288)
T cd06616 160 DSI-AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLT---QVVKGDPPILSNSE 235 (288)
T ss_pred cCC-ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHh---hhcCCCCCcCCCcC
Confidence 222 22233578899999998766 689999999999999999999999875431111100 11111111221111
Q ss_pred chhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 404 DQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 404 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.. .....+.+++.+||+.+|++|||+++|+.+
T Consensus 236 ~~---~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 236 ER---EFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CC---ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11 112237789999999999999999999854
No 309
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=2.3e-37 Score=295.46 Aligned_cols=264 Identities=22% Similarity=0.258 Sum_probs=194.4
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CCceeeEEEEEeeCCE----
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIR-HRNIVKLYGFCLHRKC---- 243 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~---- 243 (468)
++|++.+.||+|+||.||+|.. .+++.||+|++....... .....+.+|+.+++.++ |+||+++++++.....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~-~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~ 79 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEE-GIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP 79 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhcccc-CCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence 3688889999999999999975 468999999987543321 22356788999999995 6999999999887655
Q ss_pred -EEEEEEeccCCChhhhhhcCcc--cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC-CCCeEEeec
Q 012219 244 -MFLIYEYMEMGSLFCVLRTDEE--AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS-ELEAFVADF 319 (468)
Q Consensus 244 -~~lv~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~-~~~~kl~Df 319 (468)
.++||||+++ +|.+++..... ...+++..++.++.||+.||.||| +.+++||||+|+||+++. ++.+||+||
T Consensus 80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~~~nil~~~~~~~~kl~df 155 (295)
T cd07837 80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH---KHGVMHRDLKPQNLLVDKQKGLLKIADL 155 (295)
T ss_pred eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEecCCCeEEEeec
Confidence 8999999985 88888765332 245899999999999999999999 789999999999999998 889999999
Q ss_pred cccccccCCCCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccc---------
Q 012219 320 GVARLLNFDSSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNI--------- 389 (468)
Q Consensus 320 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~--------- 389 (468)
|+++.............+++.|+|||++.+ ..++.++||||||+++|+|++|..||..............
T Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (295)
T cd07837 156 GLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQV 235 (295)
T ss_pred ccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhh
Confidence 999865433333333456888999998765 4578999999999999999999999865332111100000
Q ss_pred --ccccccC----CCCCCc-cchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 390 --KLIDLLD----PRLSPP-VDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 390 --~~~~~~~----~~~~~~-~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
...+..+ +...+. ...........+.+++.+||+.||.+||++.+++.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 236 WPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred CcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 0000000 000000 000000112237789999999999999999998753
No 310
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.2e-38 Score=306.43 Aligned_cols=252 Identities=25% Similarity=0.408 Sum_probs=195.8
Q ss_pred cccceeeeeCCceEEEEEc-CCCCEEEEEEecCcch-hhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC--EEEEEE
Q 012219 173 HIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSET-EELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK--CMFLIY 248 (468)
Q Consensus 173 ~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv~ 248 (468)
.....||+|+|-+||+|.+ .+|..||--.++..+. .....++.|..|+++|+.|+|+||+++++++.+.. ...+|+
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iT 122 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFIT 122 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeee
Confidence 3456799999999999965 3566666443332222 22235688999999999999999999999998754 478999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC-CCeEEeeccccccccC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSE-LEAFVADFGVARLLNF 327 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~-~~~kl~Dfg~~~~~~~ 327 (468)
|.+..|+|..|+.+.+. .+.....+|+.||++||.|||++ .++|+|||||-.|||++.+ |.|||+|+|+|..+..
T Consensus 123 EL~TSGtLr~Y~kk~~~---vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~ 198 (632)
T KOG0584|consen 123 ELFTSGTLREYRKKHRR---VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK 198 (632)
T ss_pred ecccCCcHHHHHHHhcc---CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence 99999999999987665 78888999999999999999987 7899999999999999877 8999999999998753
Q ss_pred CCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCC-CCCccchh
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPR-LSPPVDQK 406 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 406 (468)
. ......|||.|||||+.. ..|++.+||||||+.++||+|+..||..-........+ ...-+.|. +.....
T Consensus 199 s--~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKK---V~SGiKP~sl~kV~d-- 270 (632)
T KOG0584|consen 199 S--HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKK---VTSGIKPAALSKVKD-- 270 (632)
T ss_pred c--ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHH---HHcCCCHHHhhccCC--
Confidence 3 333478999999999876 78999999999999999999999999755443222211 11111111 111111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHH-HHHhc
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRPTMQLVSN-EFIAR 442 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~-~l~~~ 442 (468)
.++.++|.+|+.. .++|||+.|++. .|+..
T Consensus 271 -----Pevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~ 301 (632)
T KOG0584|consen 271 -----PEVREFIEKCLAT-KSERLSAKELLKDPFFDE 301 (632)
T ss_pred -----HHHHHHHHHHhcC-chhccCHHHHhhChhhcc
Confidence 1277899999999 899999999884 44444
No 311
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=2.8e-37 Score=294.84 Aligned_cols=262 Identities=23% Similarity=0.292 Sum_probs=193.5
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|++.+.||+|++|.||+|... +++.||+|.+....... ...+.+.+|++++++++|+||+++++++......++||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDE-GVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVF 80 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccc-cchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEE
Confidence 46888999999999999999764 68899999986543321 23356889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC-CCCeEEeeccccccccC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS-ELEAFVADFGVARLLNF 327 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~-~~~~kl~Dfg~~~~~~~ 327 (468)
||++ ++|.+++..... ..+++.....++.||+.||+||| +.+++|+||+|+||+++. ++.+||+|||++.....
T Consensus 81 e~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~ 155 (294)
T PLN00009 81 EYLD-LDLKKHMDSSPD-FAKNPRLIKTYLYQILRGIAYCH---SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGI 155 (294)
T ss_pred eccc-ccHHHHHHhCCC-CCcCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCcceEEEECCCCEEEEcccccccccCC
Confidence 9996 578877754332 23678888899999999999999 789999999999999985 56789999999976543
Q ss_pred CCCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcc----cc----------cc
Q 012219 328 DSSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKN----IK----------LI 392 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~----~~----------~~ 392 (468)
.........+++.|+|||++.+ ..++.++|||||||++|+|+||+.||............. .. ..
T Consensus 156 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (294)
T PLN00009 156 PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLP 235 (294)
T ss_pred CccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccch
Confidence 3322333457889999998865 457899999999999999999999986543211100000 00 00
Q ss_pred cc--cCCCCCCcc-chhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 393 DL--LDPRLSPPV-DQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 393 ~~--~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
+. ..+...... ..........+.+++.+|++.+|++||++.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 236 DYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred hhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 000000000 0000011123678999999999999999999885
No 312
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=5.1e-37 Score=290.64 Aligned_cols=246 Identities=22% Similarity=0.247 Sum_probs=186.8
Q ss_pred eeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHh---hccCCceeeEEEEEeeCCEEEEEEEecc
Q 012219 177 CIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLS---QIRHRNIVKLYGFCLHRKCMFLIYEYME 252 (468)
Q Consensus 177 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~---~l~h~niv~l~~~~~~~~~~~lv~e~~~ 252 (468)
.||+|+||.||++.. .+++.+|+|.+.............+.+|..++. ..+|+|++.+++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 489999999999975 468999999987654322222233444544333 3479999999999999999999999999
Q ss_pred CCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCc
Q 012219 253 MGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNR 332 (468)
Q Consensus 253 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 332 (468)
+|+|.+++.... .+++..+..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++...... ..
T Consensus 81 ~~~L~~~i~~~~---~l~~~~~~~i~~qi~~al~~lH---~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~--~~ 152 (279)
T cd05633 81 GGDLHYHLSQHG---VFSEKEMRFYATEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--KP 152 (279)
T ss_pred CCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCcCCCCCCHHHEEECCCCCEEEccCCcceecccc--Cc
Confidence 999999887543 3899999999999999999999 789999999999999999999999999998755322 22
Q ss_pred eeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHH
Q 012219 333 TLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDI 411 (468)
Q Consensus 333 ~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (468)
....|+..|+|||.... ..++.++|||||||++|||++|+.||............ .........+.....
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~--~~~~~~~~~~~~~~~------- 223 (279)
T cd05633 153 HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID--RMTLTVNVELPDSFS------- 223 (279)
T ss_pred cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHH--HHhhcCCcCCccccC-------
Confidence 23468999999998864 56889999999999999999999999754322111110 000011112222221
Q ss_pred HHHHHHHHhcccCCCCCCC-----CHHHHHHHH
Q 012219 412 ILVSTVAFSCLRSQPKSRP-----TMQLVSNEF 439 (468)
Q Consensus 412 ~~l~~l~~~cl~~dP~~RP-----s~~~v~~~l 439 (468)
..+.+++.+|++.||++|| ++++++++-
T Consensus 224 ~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~ 256 (279)
T cd05633 224 PELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHV 256 (279)
T ss_pred HHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCc
Confidence 1266789999999999999 599998763
No 313
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=8.2e-37 Score=284.84 Aligned_cols=249 Identities=28% Similarity=0.423 Sum_probs=202.1
Q ss_pred CccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
+|++.+.||+|++|.||++... +++.+++|.+....... ...+.+.+|++++.+++|+|++++++++...+..++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKE-EALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE 79 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCH-HHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence 4778899999999999999654 67899999998765422 345678999999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|+++++|.+++... ..+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++|+|||.+.......
T Consensus 80 ~~~~~~L~~~~~~~---~~l~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (254)
T cd06627 80 YAENGSLRQIIKKF---GPFPESLVAVYVYQVLQGLAYLH---EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVS 153 (254)
T ss_pred cCCCCcHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCHHHEEECCCCCEEEeccccceecCCCc
Confidence 99999999998765 34899999999999999999999 7899999999999999999999999999998775443
Q ss_pred CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHH
Q 012219 330 SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQ 409 (468)
Q Consensus 330 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (468)
.......++..|+|||...+..++.++||||+|+++|+|++|+.||............ .....+.......
T Consensus 154 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~----- 224 (254)
T cd06627 154 KDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRI----VQDDHPPLPEGIS----- 224 (254)
T ss_pred ccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHH----hccCCCCCCCCCC-----
Confidence 3334456888999999988888899999999999999999999998754321111110 0011111221111
Q ss_pred HHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 410 DIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 410 ~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
..+.+++.+||..+|++||++.+++.
T Consensus 225 --~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 225 --PELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred --HHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 12667899999999999999999874
No 314
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=3.6e-37 Score=297.09 Aligned_cols=205 Identities=27% Similarity=0.430 Sum_probs=167.9
Q ss_pred CccccceeeeeCCceEEEEEcC---CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC--CEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARLP---SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR--KCMF 245 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 245 (468)
.|.+.+.||+|+||.||+|... +++.||+|.+...........+.+.+|++++.+++||||+++++++... ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 3777889999999999999764 4789999999874322222335677899999999999999999999988 7899
Q ss_pred EEEEeccCCChhhhhhcCcc--cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC----CCCeEEeec
Q 012219 246 LIYEYMEMGSLFCVLRTDEE--AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS----ELEAFVADF 319 (468)
Q Consensus 246 lv~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~----~~~~kl~Df 319 (468)
+||||+++ ++.+.+..... ...++...++.++.|++.||.||| +.+++||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH---SNWVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999975 67666643221 235888999999999999999999 789999999999999999 899999999
Q ss_pred cccccccCCCC---CceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCccc
Q 012219 320 GVARLLNFDSS---NRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLS 379 (468)
Q Consensus 320 g~~~~~~~~~~---~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~ 379 (468)
|+++....... ......++..|+|||++.+ ..++.++|||||||++|+|++|+.||....
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~ 220 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGRE 220 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCc
Confidence 99987643222 1223457889999998766 457899999999999999999999987543
No 315
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.7e-38 Score=297.47 Aligned_cols=258 Identities=25% Similarity=0.393 Sum_probs=203.8
Q ss_pred hCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIR-HRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 248 (468)
..|++.++||+||.+.||++...+.+.+|+|++...... ...+..|.+|+.+|.+|+ |.+|+++++|-..++.+||||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D-~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEAD-NQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcC-HHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 568889999999999999999888899999988655443 346788999999999995 999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||=+ .+|..+|....... ..| .+..+..|++.|+.++| ..||||.||||.|+|+-. |.+||+|||.|..+..+
T Consensus 440 E~Gd-~DL~kiL~k~~~~~-~~~-~lk~ywkqML~aV~~IH---~~gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI~~D 512 (677)
T KOG0596|consen 440 ECGD-IDLNKILKKKKSID-PDW-FLKFYWKQMLLAVKTIH---QHGIVHSDLKPANFLLVK-GRLKLIDFGIANAIQPD 512 (677)
T ss_pred eccc-ccHHHHHHhccCCC-chH-HHHHHHHHHHHHHHHHH---HhceeecCCCcccEEEEe-eeEEeeeechhcccCcc
Confidence 9864 58999998655432 334 67788999999999999 679999999999999876 68999999999988654
Q ss_pred CCC--ceeccccccccccccccCC-----------CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccccccccc
Q 012219 329 SSN--RTLLAGTYGYIAPELAYTM-----------VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLL 395 (468)
Q Consensus 329 ~~~--~~~~~g~~~y~aPE~~~~~-----------~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 395 (468)
... ....+||+.||+||.+... +++++|||||+|||||+|+.|+.||..... ...++..+.
T Consensus 513 TTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n------~~aKl~aI~ 586 (677)
T KOG0596|consen 513 TTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN------QIAKLHAIT 586 (677)
T ss_pred ccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH------HHHHHHhhc
Confidence 432 2345899999999988543 256789999999999999999999985432 123344455
Q ss_pred CCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 396 DPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
+|...-+++..... .++.+++..||..||++|||+.+++++-+-..
T Consensus 587 ~P~~~Iefp~~~~~--~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~ 632 (677)
T KOG0596|consen 587 DPNHEIEFPDIPEN--DELIDVMKCCLARDPKKRWSIPELLQHPFLQI 632 (677)
T ss_pred CCCccccccCCCCc--hHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence 55433222222111 11677899999999999999999997655443
No 316
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=3.2e-37 Score=299.79 Aligned_cols=271 Identities=23% Similarity=0.291 Sum_probs=199.7
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee----CCE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH----RKC 243 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~ 243 (468)
.++|++.+.||+|+||.||+|.. .+|+.||+|++...... ....+.+.+|+.++++++||||+++.+++.. ...
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDV-PTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKD 82 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEecccccc-ccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCce
Confidence 36788999999999999999974 46999999998764322 1234567789999999999999999988753 346
Q ss_pred EEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccc
Q 012219 244 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVAR 323 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~ 323 (468)
.++|+||+. |+|.+++.... .+++..+..++.||+.||.||| ..+++||||||+||+++.++.+||+|||+++
T Consensus 83 ~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~ 155 (334)
T cd07855 83 VYVVMDLME-SDLHHIIHSDQ---PLTEEHIRYFLYQLLRGLKYIH---SANVIHRDLKPSNLLVNEDCELRIGDFGMAR 155 (334)
T ss_pred EEEEEehhh-hhHHHHhccCC---CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEecccccce
Confidence 899999996 68988886543 3899999999999999999999 7899999999999999999999999999997
Q ss_pred cccCCCC----CceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhh---h---------
Q 012219 324 LLNFDSS----NRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSL---D--------- 386 (468)
Q Consensus 324 ~~~~~~~----~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~---~--------- 386 (468)
....... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||.......... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~ 235 (334)
T cd07855 156 GLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEV 235 (334)
T ss_pred eecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHh
Confidence 6543221 1123468889999998765 468899999999999999999999996543211000 0
Q ss_pred ----cccccc---cccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH-HHHhcCCCCC
Q 012219 387 ----KNIKLI---DLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN-EFIARNKAPM 447 (468)
Q Consensus 387 ----~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~-~l~~~~~~~~ 447 (468)
...... +....................+.+++.+||+.+|++||++.+++. .|.+..+.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~~ 304 (334)
T cd07855 236 LNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDPD 304 (334)
T ss_pred hhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCCc
Confidence 000000 000000000000001111234788999999999999999988875 5555544444
No 317
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=8.6e-37 Score=289.50 Aligned_cols=257 Identities=21% Similarity=0.226 Sum_probs=190.1
Q ss_pred ccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CCceeeEEEEEeeC--CEEEEE
Q 012219 172 FHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIR-HRNIVKLYGFCLHR--KCMFLI 247 (468)
Q Consensus 172 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~--~~~~lv 247 (468)
|++.+.||+|+||.||+|.. .+++.+|+|+++...... ......+|+.++.++. |+|++++++++.+. +..++|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~--~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv 78 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSL--EQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALV 78 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCc--hhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEE
Confidence 56678899999999999974 568999999987643221 1123457888888885 99999999999987 889999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
+||++ |++.+.+.... ..+++.+++.++.|++.||.||| +.+++||||+|+||+++. +.+||+|||+++....
T Consensus 79 ~e~~~-~~l~~~l~~~~--~~~~~~~~~~~~~qi~~~L~~LH---~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~ 151 (282)
T cd07831 79 FELMD-MNLYELIKGRK--RPLPEKRVKSYMYQLLKSLDHMH---RNGIFHRDIKPENILIKD-DILKLADFGSCRGIYS 151 (282)
T ss_pred EecCC-ccHHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEcC-CCeEEEeccccccccc
Confidence 99997 58888776533 24899999999999999999999 779999999999999999 9999999999987643
Q ss_pred CCCCceecccccccccccccc-CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhh-------------ccccccc
Q 012219 328 DSSNRTLLAGTYGYIAPELAY-TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLD-------------KNIKLID 393 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~-------------~~~~~~~ 393 (468)
... .....++..|+|||+.. +..++.++|||||||++|||++|+.||........... .......
T Consensus 152 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (282)
T cd07831 152 KPP-YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSR 230 (282)
T ss_pred CCC-cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccc
Confidence 222 22345788999999764 45678899999999999999999999965332110000 0000000
Q ss_pred ccCCCCCCc----cchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 394 LLDPRLSPP----VDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 394 ~~~~~~~~~----~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
..+...... ...........+.+++.+||+.+|++||++++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 231 HMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred cccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 000000000 000011123458889999999999999999999864
No 318
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.6e-36 Score=283.33 Aligned_cols=253 Identities=27% Similarity=0.412 Sum_probs=203.2
Q ss_pred CccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
+|.+.+.||+|+||.||++... +++.+++|++...... ....+.+.+|+++++.++|+|++++.+.+......++++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e 79 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMS-EKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME 79 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCC-hHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence 4778889999999999999764 6899999999765432 1335678899999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCc-ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 250 YMEMGSLFCVLRTDE-EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
|+++++|.+++.... ....+++.++..++.+++.||.||| +.+++|+||+|+||+++.++.++|+|||.+......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh---~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 156 (258)
T cd08215 80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH---SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSST 156 (258)
T ss_pred ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHHeEEcCCCcEEECCccceeecccC
Confidence 999999999997642 1245899999999999999999999 779999999999999999999999999999876544
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
........|++.|+|||...+..++.++||||+|+++++|++|+.||............ .....+.+.....
T Consensus 157 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~~~~---- 228 (258)
T cd08215 157 VDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKI----LKGQYPPIPSQYS---- 228 (258)
T ss_pred cceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHH----hcCCCCCCCCCCC----
Confidence 33334456888999999998888999999999999999999999998654321111110 0000111111111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
..+.+++.+||..+|++|||+.+++++
T Consensus 229 ---~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 229 ---SELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred ---HHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 226779999999999999999998853
No 319
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-37 Score=317.20 Aligned_cols=263 Identities=27% Similarity=0.422 Sum_probs=207.8
Q ss_pred HHHHhhCccccceeeeeCCceEEEEEcC--------CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEE
Q 012219 165 MIEATEDFHIKYCIGTGGYGSVYRARLP--------SGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLY 235 (468)
Q Consensus 165 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~ 235 (468)
++...++..+.+.||+|.||.|++|... ....||||.++..... ...+.+..|+++|+.+ +|+||+.++
T Consensus 291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~--~~~~~~~~El~~m~~~g~H~niv~ll 368 (609)
T KOG0200|consen 291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS--SEKKDLMSELNVLKELGKHPNIVNLL 368 (609)
T ss_pred eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc--HHHHHHHHHHHHHHHhcCCcchhhhe
Confidence 3444455666779999999999999632 1457999999876654 4568899999999998 599999999
Q ss_pred EEEeeCCEEEEEEEeccCCChhhhhhcCc-----cc--------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCC
Q 012219 236 GFCLHRKCMFLIYEYMEMGSLFCVLRTDE-----EA--------VGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDIS 302 (468)
Q Consensus 236 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~-----~~--------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk 302 (468)
|+|..++..++|.||+..|+|..+++..+ .. ..+...+.+.++.|||.|++||+ +.+++||||.
T Consensus 369 G~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~---~~~~vHRDLA 445 (609)
T KOG0200|consen 369 GACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLA---SVPCVHRDLA 445 (609)
T ss_pred eeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHh---hCCccchhhh
Confidence 99999999999999999999999998765 00 13888999999999999999999 8899999999
Q ss_pred CCceeeCCCCCeEEeeccccccccCCCCCc-eeccc--cccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcc
Q 012219 303 SNNVLLNSELEAFVADFGVARLLNFDSSNR-TLLAG--TYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELL 378 (468)
Q Consensus 303 ~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~-~~~~g--~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~ 378 (468)
++|||++.+..+||+|||+|+......... ....+ ...|||||.+....|+.+||||||||+||||+| |..||...
T Consensus 446 aRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~ 525 (609)
T KOG0200|consen 446 ARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGI 525 (609)
T ss_pred hhhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCC
Confidence 999999999999999999999765433332 21222 346999999999999999999999999999999 99998763
Q ss_pred cccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 379 SSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
...... .+.+........+..... ++++++..||+.+|++||++.++.+.|...
T Consensus 526 ~~~~~l-------~~~l~~G~r~~~P~~c~~---eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 526 PPTEEL-------LEFLKEGNRMEQPEHCSD---EIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred CcHHHH-------HHHHhcCCCCCCCCCCCH---HHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 311111 112222222111222112 266899999999999999999999999884
No 320
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.6e-36 Score=284.15 Aligned_cols=244 Identities=23% Similarity=0.282 Sum_probs=185.5
Q ss_pred ceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHH-HhhccCCceeeEEEEEeeCCEEEEEEEeccC
Q 012219 176 YCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARL-LSQIRHRNIVKLYGFCLHRKCMFLIYEYMEM 253 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 253 (468)
+.||+|+||.||+|.. .+++.||+|.+.............+..|..+ ....+|+|++++++++...+..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 4589999999999975 4689999999976543322233344455544 4455899999999999999999999999999
Q ss_pred CChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCce
Q 012219 254 GSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRT 333 (468)
Q Consensus 254 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 333 (468)
++|.+++.... .+++..+..++.|++.||.||| +.+++||||+|+||+++.++.++|+|||+++.... ..
T Consensus 82 ~~L~~~l~~~~---~~~~~~~~~i~~qi~~aL~~lH---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----~~ 151 (260)
T cd05611 82 GDCASLIKTLG---GLPEDWAKQYIAEVVLGVEDLH---QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----NK 151 (260)
T ss_pred CCHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCcEEEeecccceeccc----cc
Confidence 99999997543 3788999999999999999999 78999999999999999999999999999875432 22
Q ss_pred eccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHH
Q 012219 334 LLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIIL 413 (468)
Q Consensus 334 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (468)
...++..|+|||...+..++.++||||||+++|||+||..||......... ..... . ........... ....
T Consensus 152 ~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~-~---~~~~~~~~~~~---~~~~ 223 (260)
T cd05611 152 KFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVF-DNILS-R---RINWPEEVKEF---CSPE 223 (260)
T ss_pred cCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHH-HHHHh-c---ccCCCCccccc---CCHH
Confidence 345788999999998888899999999999999999999999654322111 00000 0 00011111101 1122
Q ss_pred HHHHHHhcccCCCCCCCCHHHHHH
Q 012219 414 VSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 414 l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
+.+++.+||+.+|++||++.++.+
T Consensus 224 ~~~~i~~~l~~~p~~R~~~~~~~~ 247 (260)
T cd05611 224 AVDLINRLLCMDPAKRLGANGYQE 247 (260)
T ss_pred HHHHHHHHccCCHHHccCCCcHHH
Confidence 678999999999999997754433
No 321
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=2e-36 Score=287.64 Aligned_cols=259 Identities=25% Similarity=0.305 Sum_probs=193.4
Q ss_pred ccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc---cCCceeeEEEEEeeCCE----
Q 012219 172 FHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQI---RHRNIVKLYGFCLHRKC---- 243 (468)
Q Consensus 172 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~---- 243 (468)
|++.+.||+|+||.||+|... +++.+|+|++....... .....+.+|+.++.++ +|+|++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 79 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEE-GIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL 79 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccc-hhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence 566788999999999999875 48999999997543322 1234566787777666 59999999999988766
Q ss_pred -EEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccc
Q 012219 244 -MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVA 322 (468)
Q Consensus 244 -~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~ 322 (468)
.+++|||+. ++|.+++..... ..+++..++.++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||++
T Consensus 80 ~~~l~~e~~~-~~l~~~l~~~~~-~~l~~~~~~~~~~~i~~al~~LH---~~~i~h~~l~~~nili~~~~~~~l~dfg~~ 154 (287)
T cd07838 80 KLTLVFEHVD-QDLATYLSKCPK-PGLPPETIKDLMRQLLRGVDFLH---SHRIVHRDLKPQNILVTSDGQVKIADFGLA 154 (287)
T ss_pred eeEEEehhcc-cCHHHHHHHccC-CCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhEEEccCCCEEEeccCcc
Confidence 899999997 489888865432 24899999999999999999999 779999999999999999999999999999
Q ss_pred ccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccc------c-----c
Q 012219 323 RLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNI------K-----L 391 (468)
Q Consensus 323 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~------~-----~ 391 (468)
....... ......++..|+|||++.+..++.++|||||||++|||++|+.||.............. . .
T Consensus 155 ~~~~~~~-~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07838 155 RIYSFEM-ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRN 233 (287)
T ss_pred eeccCCc-ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCC
Confidence 7764332 22233578899999999988999999999999999999999999875432111000000 0 0
Q ss_pred ----ccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 392 ----IDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 392 ----~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
......................+.+++.+||+.||++||++++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 234 VSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred cccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 0000111111111111122234778999999999999999999884
No 322
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.2e-36 Score=292.47 Aligned_cols=263 Identities=28% Similarity=0.294 Sum_probs=194.7
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC--CEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR--KCMF 245 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 245 (468)
.++|++.+.||+|+||.||+|.. .+|+.||+|++....... .....+.+|++++++++|+|++++++++... +..+
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-GIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC-CCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 46799999999999999999975 468999999987543221 1123456899999999999999999998754 5689
Q ss_pred EEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccc
Q 012219 246 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLL 325 (468)
Q Consensus 246 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 325 (468)
+||||+.+ +|.+++.... ..+++.++..++.|++.||+||| +.+++||||||+||+++.++.+||+|||++...
T Consensus 85 lv~e~~~~-~l~~~l~~~~--~~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~ 158 (309)
T cd07845 85 LVMEYCEQ-DLASLLDNMP--TPFSESQVKCLMLQLLRGLQYLH---ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTY 158 (309)
T ss_pred EEEecCCC-CHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECccceeeec
Confidence 99999974 8888876543 34899999999999999999999 789999999999999999999999999999876
Q ss_pred cCCCCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhh--cc-----cccc-cc--
Q 012219 326 NFDSSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLD--KN-----IKLI-DL-- 394 (468)
Q Consensus 326 ~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~--~~-----~~~~-~~-- 394 (468)
...........++..|+|||.+.+ ..++.++||||+||++|||++|+.||........... .. .... ..
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (309)
T cd07845 159 GLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSD 238 (309)
T ss_pred CCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhc
Confidence 543333333445788999998865 4578999999999999999999999864432111000 00 0000 00
Q ss_pred ----cCCCCCCc----cchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 395 ----LDPRLSPP----VDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 395 ----~~~~~~~~----~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
-....... ...........+.+++.+|++.||++|||+++++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 239 LPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred ccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 00000000 000000012236689999999999999999999844
No 323
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=5.5e-37 Score=298.36 Aligned_cols=266 Identities=22% Similarity=0.308 Sum_probs=194.6
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC-----C
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR-----K 242 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~ 242 (468)
+++|.+.+.||+|+||.||+|.. .+|+.||+|++...... .....+.+|+.++++++|+||+++++++... .
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 81 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQ--TFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN 81 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccc--hhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence 46899999999999999999964 57899999998643222 2345678899999999999999999987653 3
Q ss_pred EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccc
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVA 322 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~ 322 (468)
..++++||+.+ +|...+... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 82 ~~~lv~e~~~~-~l~~~~~~~----~l~~~~~~~i~~ql~~aL~~LH---~~~ivH~dlkp~Nill~~~~~~kl~dfg~~ 153 (336)
T cd07849 82 DVYIVQELMET-DLYKLIKTQ----HLSNDHIQYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTNCDLKICDFGLA 153 (336)
T ss_pred eEEEEehhccc-CHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEECCCCCEEECcccce
Confidence 57999999974 787777542 3899999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCC---ceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhh---h-----cccc
Q 012219 323 RLLNFDSSN---RTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSL---D-----KNIK 390 (468)
Q Consensus 323 ~~~~~~~~~---~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~---~-----~~~~ 390 (468)
+........ .....|+..|+|||.+.+ ..++.++|||||||++|+|++|+.||.......... . ....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~ 233 (336)
T cd07849 154 RIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQED 233 (336)
T ss_pred eeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHH
Confidence 765432211 122467889999998654 568899999999999999999999986432110000 0 0000
Q ss_pred cccccC-----------CCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH-HHhcCC
Q 012219 391 LIDLLD-----------PRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE-FIARNK 444 (468)
Q Consensus 391 ~~~~~~-----------~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~-l~~~~~ 444 (468)
.....+ .................+.+++.+||+.||++|||+.+++++ +.+...
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~ 299 (336)
T cd07849 234 LNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH 299 (336)
T ss_pred HHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence 000000 000000000001112347789999999999999999999965 433333
No 324
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=2.5e-36 Score=283.65 Aligned_cols=252 Identities=24% Similarity=0.338 Sum_probs=195.5
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcc--hhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC--CEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSE--TEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR--KCM 244 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 244 (468)
.+|.+.+.||+|+||.||+|.. .+++.||+|.+.... .......+.+.+|++++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4688899999999999999975 468999999875432 11223456888999999999999999999998764 468
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
++++||+++++|.+++.... .+++.....++.|++.||.||| +.+++|+||||+||+++.++.++|+|||+++.
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~---~l~~~~~~~~~~~i~~al~~LH---~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~ 155 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG---ALTENVTRRYTRQILQGVSYLH---SNMIVHRDIKGANILRDSAGNVKLGDFGASKR 155 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECccccccc
Confidence 89999999999999987543 2788889999999999999999 77999999999999999999999999999976
Q ss_pred ccCC---CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 325 LNFD---SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 325 ~~~~---~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
.... ........++..|+|||++.+..++.++|||||||++|+|++|+.||........... .......+.+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~---~~~~~~~~~~p~ 232 (264)
T cd06653 156 IQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFK---IATQPTKPMLPD 232 (264)
T ss_pred cccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHH---HHcCCCCCCCCc
Confidence 5321 1112234588899999999988899999999999999999999999875432211110 000001111222
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
... ..+.+++.+|+. +|..||+..+++++
T Consensus 233 ~~~-------~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 233 GVS-------DACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred ccC-------HHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 111 126678889998 57999999988754
No 325
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=1.2e-36 Score=289.90 Aligned_cols=250 Identities=26% Similarity=0.374 Sum_probs=196.1
Q ss_pred ceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEeccCC
Q 012219 176 YCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYMEMG 254 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 254 (468)
..||+|+||.||++.. .+++.||+|++...... ..+.+.+|+.+++.++|+|++++++++...+..+++|||++++
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~---~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 102 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 102 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchh---HHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCC
Confidence 5699999999999976 57899999998644322 3467889999999999999999999999999999999999999
Q ss_pred ChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCcee
Q 012219 255 SLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRTL 334 (468)
Q Consensus 255 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~ 334 (468)
+|.+++... .+++.....++.|++.|++||| +.+++||||+|+||+++.++.++|+|||++............
T Consensus 103 ~L~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH---~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~ 175 (292)
T cd06657 103 ALTDIVTHT----RMNEEQIAAVCLAVLKALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKS 175 (292)
T ss_pred cHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCCEEEcccccceecccccccccc
Confidence 999987532 3788999999999999999999 779999999999999999999999999998765433333334
Q ss_pred ccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHH
Q 012219 335 LAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILV 414 (468)
Q Consensus 335 ~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 414 (468)
..++..|+|||+..+..++.++||||||+++|||++|+.||........... ......+..... . .....+
T Consensus 176 ~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~----~~~~~~~~~~~~-~----~~~~~l 246 (292)
T cd06657 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKM----IRDNLPPKLKNL-H----KVSPSL 246 (292)
T ss_pred cccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH----HHhhCCcccCCc-c----cCCHHH
Confidence 5688999999999888889999999999999999999999864332111000 001111111110 0 011126
Q ss_pred HHHHHhcccCCCCCCCCHHHHHH-HHHhcCC
Q 012219 415 STVAFSCLRSQPKSRPTMQLVSN-EFIARNK 444 (468)
Q Consensus 415 ~~l~~~cl~~dP~~RPs~~~v~~-~l~~~~~ 444 (468)
.+++.+||+.+|.+||++.+++. .|.....
T Consensus 247 ~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~ 277 (292)
T cd06657 247 KGFLDRLLVRDPAQRATAAELLKHPFLAKAG 277 (292)
T ss_pred HHHHHHHHhCCcccCcCHHHHhcChHHhccC
Confidence 67899999999999999999885 3544433
No 326
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=6.8e-37 Score=287.17 Aligned_cols=246 Identities=24% Similarity=0.344 Sum_probs=194.8
Q ss_pred eeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEeccCCCh
Q 012219 178 IGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYMEMGSL 256 (468)
Q Consensus 178 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 256 (468)
||+|+||.||++... +|+.+++|.+...........+.+.+|++++++++|+|++++++.+......++++||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999875 4899999999766554344567888999999999999999999999999999999999999999
Q ss_pred hhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCC------
Q 012219 257 FCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSS------ 330 (468)
Q Consensus 257 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~------ 330 (468)
.+++.... .+++..++.++.|++.||+||| ..+++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~l~~~~---~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~ 154 (265)
T cd05579 81 ASLLENVG---SLDEDVARIYIAEIVLALEYLH---SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDD 154 (265)
T ss_pred HHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccc
Confidence 99997644 4899999999999999999999 78999999999999999999999999999876533211
Q ss_pred --CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 331 --NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 331 --~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
......++..|+|||.......+.++||||||+++|++++|+.||............ .. .........
T Consensus 155 ~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~----~~-~~~~~~~~~----- 224 (265)
T cd05579 155 EKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNI----LN-GKIEWPEDV----- 224 (265)
T ss_pred cccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH----hc-CCcCCCccc-----
Confidence 223345788999999998888999999999999999999999998754322111100 00 000111110
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
.....+.+++.+|++.+|++|||+..+.+.+
T Consensus 225 ~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 225 EVSDEAIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred cCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 0012367899999999999999995555444
No 327
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=3.4e-36 Score=283.08 Aligned_cols=250 Identities=22% Similarity=0.331 Sum_probs=190.0
Q ss_pred HHHHHHHhhCcccccee--eeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEE
Q 012219 162 FQDMIEATEDFHIKYCI--GTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGF 237 (468)
Q Consensus 162 ~~~~~~~~~~~~~~~~l--g~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~ 237 (468)
..+.....++|.+.+.+ |+|+||.||++.. .++..+|+|.+....... .|+.....+ +|+|+++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~--------~e~~~~~~~~~h~~iv~~~~~ 77 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA--------IEPMVHQLMKDNPNFIKLYYS 77 (267)
T ss_pred HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch--------hhHHHHHHhhcCCCEEEEEEE
Confidence 34455556677777776 9999999999975 568889999986543221 122222222 79999999999
Q ss_pred EeeCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC-CeEE
Q 012219 238 CLHRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSEL-EAFV 316 (468)
Q Consensus 238 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~-~~kl 316 (468)
+...+..++||||+++++|.+++.... .+++.++..++.|+++||.||| +.+++||||||+||+++.++ .++|
T Consensus 78 ~~~~~~~~iv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~nil~~~~~~~~~l 151 (267)
T PHA03390 78 VTTLKGHVLIMDYIKDGDLFDLLKKEG---KLSEAEVKKIIRQLVEALNDLH---KHNIIHNDIKLENVLYDRAKDRIYL 151 (267)
T ss_pred EecCCeeEEEEEcCCCCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEeCCCCeEEE
Confidence 999999999999999999999997653 4899999999999999999999 78999999999999999998 9999
Q ss_pred eeccccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccC
Q 012219 317 ADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLD 396 (468)
Q Consensus 317 ~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 396 (468)
+|||+++..... ....++..|+|||++.+..++.++||||||+++|||++|+.||................ ..
T Consensus 152 ~dfg~~~~~~~~----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---~~ 224 (267)
T PHA03390 152 CDYGLCKIIGTP----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKR---QQ 224 (267)
T ss_pred ecCccceecCCC----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHh---hc
Confidence 999998765422 22357889999999998889999999999999999999999997443221111110000 01
Q ss_pred CCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCC-HHHHHH
Q 012219 397 PRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPT-MQLVSN 437 (468)
Q Consensus 397 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs-~~~v~~ 437 (468)
..... .. .....+.+++.+||+.+|.+||+ ++++++
T Consensus 225 ~~~~~--~~---~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 225 KKLPF--IK---NVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred ccCCc--cc---ccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 11100 00 11122677899999999999996 588873
No 328
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.6e-36 Score=288.37 Aligned_cols=259 Identities=27% Similarity=0.338 Sum_probs=194.6
Q ss_pred ccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC--CEEEEEE
Q 012219 172 FHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR--KCMFLIY 248 (468)
Q Consensus 172 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 248 (468)
|++.+.||+|++|.||+|... +++.+|+|++..... .....+.+.+|+++++.++|+|++++++++... +..++|+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 79 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENE-KEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVF 79 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccc-cccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEe
Confidence 567788999999999999765 588999999986641 112345688999999999999999999999987 7899999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+++ +|.+++.... ..+++..++.++.||+.||+||| +.+++|+||+|+||++++++.++|+|||++......
T Consensus 80 e~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH---~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 80 EYMDH-DLTGLLDSPE--VKFTESQIKCYMKQLLEGLQYLH---SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKR 153 (287)
T ss_pred ccccc-cHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence 99975 8888886542 34899999999999999999999 779999999999999999999999999999876433
Q ss_pred CC-CceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhc-----------ccccccc-
Q 012219 329 SS-NRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDK-----------NIKLIDL- 394 (468)
Q Consensus 329 ~~-~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~-----------~~~~~~~- 394 (468)
.. ......++..|+|||.+.+ ..++.++||||||+++|||+||+.||+........... .....+.
T Consensus 154 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07840 154 NSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLP 233 (287)
T ss_pred CcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccch
Confidence 21 1223356788999997764 46789999999999999999999998754321110000 0000000
Q ss_pred --cCCCCCCccch----hHHH-HHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 395 --LDPRLSPPVDQ----KIRQ-DIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 395 --~~~~~~~~~~~----~~~~-~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
........... .... ....+.+++.+||+.+|++||++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 234 WFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00000000000 0001 1234788999999999999999999875
No 329
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.9e-36 Score=288.94 Aligned_cols=257 Identities=18% Similarity=0.257 Sum_probs=181.2
Q ss_pred hCccccceeeeeCCceEEEEEcCC----CCEEEEEEecCcchhhhhh--------HHHHHHHHHHHhhccCCceeeEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPS----GKVVALKKLHRSETEELAS--------LESFGNEARLLSQIRHRNIVKLYGF 237 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~--------~~~~~~e~~~l~~l~h~niv~l~~~ 237 (468)
++|.+.+.||+|+||.||+|...+ +..+|+|+........... ......+...+..+.|+|+++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 579999999999999999998654 3456666543322110000 0112233445566789999999997
Q ss_pred EeeCC----EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCC
Q 012219 238 CLHRK----CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELE 313 (468)
Q Consensus 238 ~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~ 313 (468)
+.... ..++++|++. .++.+.+.... ..++..+..++.|++.||+||| +.+|+||||||+|||++.++.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH---~~~iiHrDiKp~Nill~~~~~ 164 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLV-ENTKEIFKRIK---CKNKKLIKNIMKDMLTTLEYIH---EHGISHGDIKPENIMVDGNNR 164 (294)
T ss_pred eeEecCCceEEEEEEehhc-cCHHHHHHhhc---cCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCc
Confidence 76543 3467777764 35666554322 2567788899999999999999 789999999999999999999
Q ss_pred eEEeeccccccccCCC-------CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhh
Q 012219 314 AFVADFGVARLLNFDS-------SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLD 386 (468)
Q Consensus 314 ~kl~Dfg~~~~~~~~~-------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~ 386 (468)
++|+|||+++.+.... .......||+.|+|||+..+..++.++|||||||++|||++|+.||...........
T Consensus 165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~ 244 (294)
T PHA02882 165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH 244 (294)
T ss_pred EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence 9999999998763221 112234699999999999999999999999999999999999999986532211110
Q ss_pred -cccc-cccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 387 -KNIK-LIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 387 -~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
.... ...+........ .....+.+++..|+..+|++||+++++.+.|
T Consensus 245 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 245 AAKCDFIKRLHEGKIKIK------NANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HhHHHHHHHhhhhhhccC------CCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 0000 011111111111 1112367899999999999999999999876
No 330
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.5e-36 Score=295.52 Aligned_cols=261 Identities=28% Similarity=0.356 Sum_probs=193.5
Q ss_pred hhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeC--CEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHR--KCM 244 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~--~~~ 244 (468)
.++|++.+.||+|+||.||+|... +++.+|+|++....... .....+.+|+.++.++ +|+||+++++++... ...
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~-~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNA-TDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcc-hhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 467888999999999999999764 68899999886432211 2234577899999999 999999999998653 468
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
++|+||++ ++|..++... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++..
T Consensus 85 ~lv~e~~~-~~L~~~~~~~----~~~~~~~~~i~~qi~~~L~~LH---~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~ 156 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN----ILEDVHKRYIMYQLLKALKYIH---SGNVIHRDLKPSNILLNSDCRVKLADFGLARS 156 (337)
T ss_pred EEEecccc-cCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCcEEEeeccchhc
Confidence 99999997 5898888653 4789999999999999999999 78999999999999999999999999999986
Q ss_pred ccCCCC-----CceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhh---cc-------
Q 012219 325 LNFDSS-----NRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLD---KN------- 388 (468)
Q Consensus 325 ~~~~~~-----~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~---~~------- 388 (468)
...... ......|+..|+|||.+.+ ..++.++||||||+++|+|+||+.||........... ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 236 (337)
T cd07852 157 LSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAED 236 (337)
T ss_pred cccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence 643221 1223457889999998754 5678899999999999999999999864332110000 00
Q ss_pred ------cccccccC---CCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 389 ------IKLIDLLD---PRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 389 ------~~~~~~~~---~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
....++++ ..-..............+.+++.+||+.||++|||+.+++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 237 IESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 00000000 000000000000112347789999999999999999999865
No 331
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.2e-36 Score=284.26 Aligned_cols=251 Identities=24% Similarity=0.340 Sum_probs=201.1
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
+|++.+.||+|+||.||++.. .+++.+++|.+....... .....+.+|++++++++|+||+++.+++......++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 79 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQ-KEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME 79 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccH-HHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence 477889999999999999964 478899999987654332 234677889999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCc-ccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 250 YMEMGSLFCVLRTDE-EAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
|+++++|.+++.... ....+++..++.++.|++.||+||| +.+++|+||+|+||+++.++.+|++|||+++.....
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh---~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~ 156 (256)
T cd08530 80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH---EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN 156 (256)
T ss_pred hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh---hCCcccCCCCcceEEEecCCcEEEeeccchhhhccC
Confidence 999999999986532 2245889999999999999999999 889999999999999999999999999999876543
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
......++..|+|||...+..++.++|+||||+++|||++|+.||........... ... .... ....
T Consensus 157 --~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~----~~~---~~~~-~~~~--- 223 (256)
T cd08530 157 --MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYK----VQR---GKYP-PIPP--- 223 (256)
T ss_pred --CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH----Hhc---CCCC-CCch---
Confidence 22334578899999999988899999999999999999999999875432211110 000 1111 1111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.....+.+++.+|++.+|++||++.+++.+
T Consensus 224 ~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 224 IYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred hhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 111237789999999999999999999864
No 332
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=2.4e-36 Score=290.29 Aligned_cols=256 Identities=27% Similarity=0.382 Sum_probs=197.3
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
..|...+.||+|+||.||+|+. .++..+|+|.+...........+.+.+|+++++.++|+|++++.+++......++|+
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 3466678899999999999975 467889999986533222234467889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
||+. |++.+.+.... ..+++.++..++.|++.|+.||| +.+++||||+|+||+++.++.++|+|||++......
T Consensus 95 e~~~-~~l~~~~~~~~--~~l~~~~~~~~~~~l~~~l~~LH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 168 (308)
T cd06634 95 EYCL-GSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 168 (308)
T ss_pred EccC-CCHHHHHHHcC--CCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHhEEECCCCcEEECCcccceeecCc
Confidence 9996 68877775433 23788999999999999999999 789999999999999999999999999998765422
Q ss_pred CCCceecccccccccccccc---CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccch
Q 012219 329 SSNRTLLAGTYGYIAPELAY---TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQ 405 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (468)
....++..|+|||.+. ...++.++|||||||++|||++|+.||............ .....+.... .
T Consensus 169 ----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~---~ 237 (308)
T cd06634 169 ----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI----AQNESPALQS---G 237 (308)
T ss_pred ----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHH----hhcCCCCcCc---c
Confidence 2345788999999874 356788999999999999999999998654321111100 0000111111 0
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 406 KIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 406 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
.....+.+++.+||+.+|++||++++++++.......
T Consensus 238 ---~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~ 274 (308)
T cd06634 238 ---HWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 274 (308)
T ss_pred ---cccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccC
Confidence 1112266799999999999999999999776655443
No 333
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.9e-36 Score=292.26 Aligned_cols=258 Identities=24% Similarity=0.350 Sum_probs=191.2
Q ss_pred ceeeee--CCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEecc
Q 012219 176 YCIGTG--GYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYME 252 (468)
Q Consensus 176 ~~lg~G--~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 252 (468)
..||+| +||+||++.. .+|+.||+|.+....... ...+.+.+|+.+++.++||||+++++++...+..++|+||+.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~ 82 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTE-EHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA 82 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence 346666 8999999975 579999999987654332 345788899999999999999999999999999999999999
Q ss_pred CCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCc
Q 012219 253 MGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNR 332 (468)
Q Consensus 253 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 332 (468)
++++.+++..... ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.++++||+.+..........
T Consensus 83 ~~~l~~~l~~~~~-~~~~~~~~~~~~~qi~~aL~~lH---~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
T cd08226 83 YGSANSLLKTYFP-EGMSEALIGNILFGALRGLNYLH---QNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKA 158 (328)
T ss_pred CCCHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccc
Confidence 9999999876432 24888999999999999999999 7899999999999999999999999998654332111111
Q ss_pred -------eeccccccccccccccCC--CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccc-------------
Q 012219 333 -------TLLAGTYGYIAPELAYTM--VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIK------------- 390 (468)
Q Consensus 333 -------~~~~g~~~y~aPE~~~~~--~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~------------- 390 (468)
....++..|+|||++.+. .++.++|||||||++|||++|+.||...............
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (328)
T cd08226 159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPC 238 (328)
T ss_pred cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccch
Confidence 112345679999998763 4789999999999999999999999754321110000000
Q ss_pred -------------------------cccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHH-HHHHh
Q 012219 391 -------------------------LIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVS-NEFIA 441 (468)
Q Consensus 391 -------------------------~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~-~~l~~ 441 (468)
.....+..+..+.. ......+.+++.+||+.||++|||+.+++ +.|.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~ 312 (328)
T cd08226 239 EESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSS---KTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFK 312 (328)
T ss_pred hhhhhccchhhhhcccccchhccccccccccccccchhh---hhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHH
Confidence 00000001111111 11223478899999999999999999988 44443
No 334
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.5e-36 Score=287.87 Aligned_cols=260 Identities=25% Similarity=0.326 Sum_probs=197.6
Q ss_pred ccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEe
Q 012219 172 FHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEY 250 (468)
Q Consensus 172 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (468)
|...+.||+|++|.||++... +++.+++|.+....... .....+.+|++++++++|+||+++++++..+...++|+||
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 79 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESE-GIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEF 79 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccc-hhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEec
Confidence 456788999999999999764 78899999987654332 2345778899999999999999999999999999999999
Q ss_pred ccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCC
Q 012219 251 MEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSS 330 (468)
Q Consensus 251 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 330 (468)
+++ ++.+++.... ..+++..++.++.|++.||.||| ..+++|+||+|+||+++.++.++|+|||.+........
T Consensus 80 ~~~-~l~~~l~~~~--~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~ 153 (283)
T cd05118 80 MDT-DLYKLIKDRQ--RGLPESLIKSYLYQLLQGLAFCH---SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR 153 (283)
T ss_pred cCC-CHHHHHHhhc--ccCCHHHHHHHHHHHHHHHHHHH---HCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc
Confidence 975 8888876533 34899999999999999999999 78999999999999999999999999999977654432
Q ss_pred CceeccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhc-----------cccccc---cc
Q 012219 331 NRTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDK-----------NIKLID---LL 395 (468)
Q Consensus 331 ~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~-----------~~~~~~---~~ 395 (468)
......++..|+|||.+.+. .++.++||||||+++|+|+||+.||............ .....+ ..
T Consensus 154 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (283)
T cd05118 154 PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNY 233 (283)
T ss_pred cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhh
Confidence 23334578889999998776 7899999999999999999999998654321110000 000000 00
Q ss_pred CCCC----CCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 396 DPRL----SPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 396 ~~~~----~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.... ..............+.+++.+||+.||.+||++.+++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 234 KFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 0000 000001111122347899999999999999999998853
No 335
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=2.1e-36 Score=296.33 Aligned_cols=200 Identities=27% Similarity=0.353 Sum_probs=168.2
Q ss_pred HhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC-----
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR----- 241 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~----- 241 (468)
..++|...+.||+|+||.||+|.. .+++.||+|.+....... ...+.+.+|+.++++++|+||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNV-THAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccCh-hHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 347899999999999999999975 478999999986543221 2335677899999999999999999988643
Q ss_pred -CEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecc
Q 012219 242 -KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFG 320 (468)
Q Consensus 242 -~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 320 (468)
...++|+||+. ++|.+.+... ++...+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 93 ~~~~~lv~e~~~-~~l~~~~~~~-----l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nil~~~~~~~kL~Dfg 163 (353)
T cd07850 93 FQDVYLVMELMD-ANLCQVIQMD-----LDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFG 163 (353)
T ss_pred cCcEEEEEeccC-CCHHHHHhhc-----CCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEccCc
Confidence 34799999996 5888877532 788889999999999999999 7799999999999999999999999999
Q ss_pred ccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcc
Q 012219 321 VARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELL 378 (468)
Q Consensus 321 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~ 378 (468)
+++...... ......++..|+|||.+.+..++.++|||||||++|+|++|+.||...
T Consensus 164 ~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~ 220 (353)
T cd07850 164 LARTAGTSF-MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGT 220 (353)
T ss_pred cceeCCCCC-CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCC
Confidence 998764322 223345788999999999999999999999999999999999998643
No 336
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=3.2e-36 Score=287.81 Aligned_cols=254 Identities=24% Similarity=0.349 Sum_probs=191.9
Q ss_pred hCccccceeeeeCCceEEEEEcCC-CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CCceeeEEEEEeeCCEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPS-GKVVALKKLHRSETEELASLESFGNEARLLSQIR-HRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv 247 (468)
++|.+.+.||+|+||.||+|...+ ++.||||.++...... ....+..|+.++.+.. |+||+++++++......+++
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~--~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v 92 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKE--ENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFIC 92 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChH--HHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEE
Confidence 568889999999999999998764 8999999997654322 2345667777776665 99999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|||+. +++.+++..... .+++..+..++.|++.|++|||+ ..+|+||||+|+||++++++.+||+|||++..+..
T Consensus 93 ~e~~~-~~l~~l~~~~~~--~l~~~~~~~i~~~i~~~l~~lH~--~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~ 167 (296)
T cd06618 93 MELMS-TCLDKLLKRIQG--PIPEDILGKMTVAIVKALHYLKE--KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVD 167 (296)
T ss_pred eeccC-cCHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh--hCCEecCCCcHHHEEEcCCCCEEECccccchhccC
Confidence 99985 477776654322 58899999999999999999994 25899999999999999999999999999876542
Q ss_pred CCCCceeccccccccccccccCCC----CCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCcc
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTMV----VTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPV 403 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~~----~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (468)
.. ......++..|+|||++.+.. ++.++||||||+++|||++|+.||............ ......+.....
T Consensus 168 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~- 242 (296)
T cd06618 168 SK-AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTK---ILQEEPPSLPPN- 242 (296)
T ss_pred CC-cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHH---HhcCCCCCCCCC-
Confidence 22 222335778999999987553 788999999999999999999998653221111110 000001111111
Q ss_pred chhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 404 DQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 404 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
. .....+.+++.+||+.||++||++++++.+-
T Consensus 243 -~---~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~ 274 (296)
T cd06618 243 -E---GFSPDFCSFVDLCLTKDHRKRPKYRELLQHP 274 (296)
T ss_pred -C---CCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence 0 0112367899999999999999999998554
No 337
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=3.5e-36 Score=293.61 Aligned_cols=274 Identities=23% Similarity=0.273 Sum_probs=199.7
Q ss_pred HHHHHHHhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee
Q 012219 162 FQDMIEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH 240 (468)
Q Consensus 162 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 240 (468)
..++...+++|.+.+.||+|+||.||+|.. .+++.||+|++....... ...+.+.+|++++.+++|+||+++++++..
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhh-HHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 355667789999999999999999999964 578999999997643222 234567789999999999999999998864
Q ss_pred C------CEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCe
Q 012219 241 R------KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEA 314 (468)
Q Consensus 241 ~------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~ 314 (468)
. ...+++++++ +++|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIll~~~~~~ 159 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIVKCQ----KLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCEL 159 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChHHEEEcCCCCE
Confidence 3 3467888877 78998887542 3889999999999999999999 7899999999999999999999
Q ss_pred EEeeccccccccCCCCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhh---c-cc
Q 012219 315 FVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLD---K-NI 389 (468)
Q Consensus 315 kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~---~-~~ 389 (468)
||+|||+++.... ......++..|+|||...+ ..++.++|||||||++|||++|+.||........... . ..
T Consensus 160 kl~dfg~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~ 236 (345)
T cd07877 160 KILDFGLARHTDD---EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 236 (345)
T ss_pred EEecccccccccc---cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence 9999999876432 2223467889999998765 5688899999999999999999999864332110000 0 00
Q ss_pred ---ccc------------cccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHH-HHHHhcCCCCC
Q 012219 390 ---KLI------------DLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVS-NEFIARNKAPM 447 (468)
Q Consensus 390 ---~~~------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~-~~l~~~~~~~~ 447 (468)
... ..++.................+.+++.+|++.||.+||++.+++ +.+......+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~~~ 310 (345)
T cd07877 237 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPD 310 (345)
T ss_pred CCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCCCC
Confidence 000 00000000000000000112367899999999999999998888 44444333333
No 338
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.6e-37 Score=294.80 Aligned_cols=250 Identities=24% Similarity=0.366 Sum_probs=204.0
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
...|.+...||+|.|+.|..|+. .++..||+|.+++....... .+.+.+|+++|..++|||||+++.+...+..+++|
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~-~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSK-RQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHH-HHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 45788999999999999999975 46899999999887665433 34488999999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|||+.+|.+++++..+.. .....+..++.|+.+|++||| ++.|+|||||++|||++.+.++||+|||++.++.
T Consensus 134 ~eya~~ge~~~yl~~~gr---~~e~~ar~~F~q~vsaveYcH---~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~- 206 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHGR---MKEKEARAKFRQIVSAVEYCH---SKNIVHRDLKAENILLDENMNIKIADFGFSTFFD- 206 (596)
T ss_pred EEeccCchhHHHHHhccc---chhhhhhhhhHHHHHHHHHHh---hcceeccccchhhcccccccceeeeccccceeec-
Confidence 999999999999988765 455788889999999999999 8899999999999999999999999999999887
Q ss_pred CCCCceeccccccccccccccCCCC-CccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchh
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTMVV-TEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQK 406 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (468)
........+|++.|.|||++.+..| ++++|+||+|+++|-|+.|..||+.-...... ...+...+.-+..-.
T Consensus 207 ~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr-------~rvl~gk~rIp~~ms 279 (596)
T KOG0586|consen 207 YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELR-------PRVLRGKYRIPFYMS 279 (596)
T ss_pred ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccccc-------chheeeeecccceee
Confidence 4445566789999999999998765 57899999999999999999999843211000 000111111111100
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
. .+.+++.+++-.+|.+|++++++..+
T Consensus 280 --~---dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 280 --C---DCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred --c---hhHHHHHHhhccCccccCCHHHhhhh
Confidence 0 14568889999999999999999854
No 339
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=2.9e-36 Score=290.62 Aligned_cols=259 Identities=20% Similarity=0.249 Sum_probs=189.4
Q ss_pred cceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEeccCC
Q 012219 175 KYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYMEMG 254 (468)
Q Consensus 175 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 254 (468)
.+.+|.|+++.||++.. +++.||+|++...... ....+.+.+|+++++.++|+||+++++++...+..+++|||+++|
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~-~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~ 84 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCS-KEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYG 84 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEeccccc-hhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCC
Confidence 34455555555555555 7899999999765322 234578999999999999999999999999999999999999999
Q ss_pred ChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCC----
Q 012219 255 SLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSS---- 330 (468)
Q Consensus 255 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~---- 330 (468)
+|.+++..... ..+++.....++.|++.||+||| +.+|+||||||+||+++.++.++|+|||.+........
T Consensus 85 ~l~~~l~~~~~-~~~~~~~~~~~~~~l~~~L~~LH---~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~ 160 (314)
T cd08216 85 SCEDLLKTHFP-EGLPELAIAFILKDVLNALDYIH---SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRV 160 (314)
T ss_pred CHHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCcceEEEecCCceEEecCccceeeccccccccc
Confidence 99999975432 24788899999999999999999 78999999999999999999999999998875532211
Q ss_pred ---CceeccccccccccccccC--CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccc-cccc-----------
Q 012219 331 ---NRTLLAGTYGYIAPELAYT--MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNI-KLID----------- 393 (468)
Q Consensus 331 ---~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~-~~~~----------- 393 (468)
......++..|+|||++.. ..++.++|||||||++|||++|+.||.............. ....
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (314)
T cd08216 161 VHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYE 240 (314)
T ss_pred cccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhc
Confidence 1122346778999999875 3588999999999999999999999975432211110000 0000
Q ss_pred ---------ccCCCCCCcc-chhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 394 ---------LLDPRLSPPV-DQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 394 ---------~~~~~~~~~~-~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
..++...... ..........+.+++.+||+.||++|||+++++++-
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p 296 (314)
T cd08216 241 DSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHS 296 (314)
T ss_pred CCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCc
Confidence 0000000000 000001112477899999999999999999999543
No 340
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2.7e-36 Score=290.16 Aligned_cols=262 Identities=23% Similarity=0.333 Sum_probs=190.9
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC-----
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK----- 242 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~----- 242 (468)
.++|++.+.||+|+||.||+|.. .+++.||+|.+....... .....+.+|++++++++||||++++++|....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKE-GFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcC-CchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 45799999999999999999975 468999999886543221 12234568999999999999999999987643
Q ss_pred ---EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeec
Q 012219 243 ---CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADF 319 (468)
Q Consensus 243 ---~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 319 (468)
..++|+||+. ++|.+.+.... ..+++.+++.++.||+.||+||| +.+++|+||||+||+++.++.+||+||
T Consensus 90 ~~~~~~lv~e~~~-~~l~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~df 163 (310)
T cd07865 90 YKGSFYLVFEFCE-HDLAGLLSNKN--VKFTLSEIKKVMKMLLNGLYYIH---RNKILHRDMKAANILITKDGILKLADF 163 (310)
T ss_pred CCceEEEEEcCCC-cCHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEECCCCcEEECcC
Confidence 4599999996 47887776532 24899999999999999999999 779999999999999999999999999
Q ss_pred cccccccCCCCC----ceeccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccc--
Q 012219 320 GVARLLNFDSSN----RTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLI-- 392 (468)
Q Consensus 320 g~~~~~~~~~~~----~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~-- 392 (468)
|++......... .....++..|+|||++.+. .++.++||||||+++|||+||+.||........ ........
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~-~~~~~~~~~~ 242 (310)
T cd07865 164 GLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQ-LTLISQLCGS 242 (310)
T ss_pred CCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCC
Confidence 999766432211 1223567889999987664 478899999999999999999999864322100 00000000
Q ss_pred ------------cccCC-CCCCccchhHHH------HHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 393 ------------DLLDP-RLSPPVDQKIRQ------DIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 393 ------------~~~~~-~~~~~~~~~~~~------~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
+..+. ............ ....+.+++.+||+.||++|||+++++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 243 ITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred CChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 00000 000000000000 01235689999999999999999999853
No 341
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=8.5e-37 Score=289.10 Aligned_cols=250 Identities=25% Similarity=0.385 Sum_probs=199.9
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CCceeeEEEEEeeCCEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIR-HRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv 247 (468)
++|.+.+.||+|+||.||+|... +++.||+|++...........+.+.+|.+++.+++ |+||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36888899999999999999754 78999999997643332233467889999999998 99999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|||+++++|.+++.... .+++..++.++.|++.||.||| +.+++|+||+|+||+++.++.++++|||++.....
T Consensus 81 ~e~~~~~~L~~~l~~~~---~l~~~~~~~i~~ql~~~l~~Lh---~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~ 154 (280)
T cd05581 81 LEYAPNGELLQYIRKYG---SLDEKCTRFYAAEILLALEYLH---SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDP 154 (280)
T ss_pred EcCCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHeEECCCCCEEecCCccccccCC
Confidence 99999999999997654 4899999999999999999999 78999999999999999999999999999876643
Q ss_pred CCC--------------------CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhc
Q 012219 328 DSS--------------------NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDK 387 (468)
Q Consensus 328 ~~~--------------------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~ 387 (468)
... ......++..|+|||......++.++||||||++++++++|+.||........ ...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~~ 233 (280)
T cd05581 155 NSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLT-FQK 233 (280)
T ss_pred ccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHH-HHH
Confidence 221 11224578899999999888899999999999999999999999875432111 110
Q ss_pred ccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCH----HHHHH
Q 012219 388 NIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTM----QLVSN 437 (468)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~----~~v~~ 437 (468)
.. .....+....+ ..+.+++.+||+.+|++||++ +++++
T Consensus 234 ~~----~~~~~~~~~~~-------~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 234 IL----KLEYSFPPNFP-------PDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HH----hcCCCCCCccC-------HHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 00 01111111111 126789999999999999999 66654
No 342
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.1e-36 Score=296.34 Aligned_cols=262 Identities=23% Similarity=0.270 Sum_probs=194.7
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC-----C
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR-----K 242 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~ 242 (468)
.++|.+.+.||+|+||+||+|.. .+++.||+|.+....... .....+.+|+.+++.++|+||+++++++... .
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNR-IDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccccc-chhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 35788899999999999999974 578999999987542221 2245677899999999999999999987643 3
Q ss_pred EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccc
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVA 322 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~ 322 (468)
..++++||+. ++|.+++.... .+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||++
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH---~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 155 (337)
T cd07858 83 DVYIVYELMD-TDLHQIIRSSQ---TLSDDHCQYFLYQLLRGLKYIH---SANVLHRDLKPSNLLLNANCDLKICDFGLA 155 (337)
T ss_pred cEEEEEeCCC-CCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCEEECcCccc
Confidence 4799999996 68888886543 3899999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchh----------------h
Q 012219 323 RLLNFDSSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWS----------------L 385 (468)
Q Consensus 323 ~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~----------------~ 385 (468)
+.............++..|+|||.+.. ..++.++|||||||++|+|++|+.||......... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07858 156 RTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGF 235 (337)
T ss_pred cccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhh
Confidence 876433233334467889999998764 46889999999999999999999998643211000 0
Q ss_pred hcccccccc---cCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 386 DKNIKLIDL---LDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 386 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
......... ...................+.+++.+||+.+|++|||+++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 236 IRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred cCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 000000000 00000000000000112336789999999999999999999965
No 343
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=3.6e-36 Score=292.58 Aligned_cols=263 Identities=24% Similarity=0.236 Sum_probs=192.3
Q ss_pred hCcc-ccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhh-----------hHHHHHHHHHHHhhccCCceeeEEE
Q 012219 170 EDFH-IKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELA-----------SLESFGNEARLLSQIRHRNIVKLYG 236 (468)
Q Consensus 170 ~~~~-~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~-----------~~~~~~~e~~~l~~l~h~niv~l~~ 236 (468)
++|. +.+.||+|+||.||+|.. .+++.||+|++......... ....+.+|++++.+++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 3454 356799999999999975 47899999998654322100 0124678999999999999999999
Q ss_pred EEeeCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEE
Q 012219 237 FCLHRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFV 316 (468)
Q Consensus 237 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl 316 (468)
++...+..+++|||+. |+|.+++.... .+++.....++.|++.||.||| +.+++|+||+|+||+++.++.++|
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~---~~~~~~~~~~~~ql~~aL~~LH---~~~i~H~dl~~~nill~~~~~~kl 160 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRKI---RLTESQVKCILLQILNGLNVLH---KWYFMHRDLSPANIFINSKGICKI 160 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHeEECCCCCEEE
Confidence 9999999999999997 68988886432 3888999999999999999999 789999999999999999999999
Q ss_pred eeccccccccCC--------------CCCceeccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCCccccc
Q 012219 317 ADFGVARLLNFD--------------SSNRTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGELLSSS 381 (468)
Q Consensus 317 ~Dfg~~~~~~~~--------------~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~ 381 (468)
+|||.++..... ........++..|+|||++.+. .++.++|||||||++|||+||+.||......
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~ 240 (335)
T PTZ00024 161 ADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEI 240 (335)
T ss_pred CCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 999999765411 1111223467889999988764 4688999999999999999999998654321
Q ss_pred chhhhc------c--c--------ccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 382 SWSLDK------N--I--------KLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 382 ~~~~~~------~--~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
...... . . ........................+.+++.+|++.+|++||++++++.+-
T Consensus 241 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~ 314 (335)
T PTZ00024 241 DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHE 314 (335)
T ss_pred HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCc
Confidence 100000 0 0 00000000000000000011123377899999999999999999998543
No 344
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=2.2e-36 Score=289.66 Aligned_cols=264 Identities=28% Similarity=0.364 Sum_probs=194.1
Q ss_pred HhhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC----
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK---- 242 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~---- 242 (468)
..++|++.+.||+|+||.||+|... +++.||+|+++...... .....+.+|++++++++|||++++++++.+..
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~-~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKE-GFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccccc-CchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 4578999999999999999999764 68899999997543221 22346778999999999999999999987654
Q ss_pred ------EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEE
Q 012219 243 ------CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFV 316 (468)
Q Consensus 243 ------~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl 316 (468)
..++|+||+++ ++...+... ...+++..+..++.|++.||+||| +.+|+|+||||+||++++++.+||
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH---~~~i~H~dl~p~nili~~~~~~kl 157 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESG--LVHFSEDHIKSFMKQLLEGLNYCH---KKNFLHRDIKCSNILLNNKGQIKL 157 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCcEEe
Confidence 78999999986 777776543 234899999999999999999999 779999999999999999999999
Q ss_pred eeccccccccCCCC-CceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhh--hc--ccc
Q 012219 317 ADFGVARLLNFDSS-NRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSL--DK--NIK 390 (468)
Q Consensus 317 ~Dfg~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~--~~--~~~ 390 (468)
+|||++........ ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||.......... .. ...
T Consensus 158 ~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~ 237 (302)
T cd07864 158 ADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSP 237 (302)
T ss_pred CcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence 99999987643321 1122345778999998764 457889999999999999999999987433211000 00 000
Q ss_pred ----cccc--------cCCCC--CCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 391 ----LIDL--------LDPRL--SPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 391 ----~~~~--------~~~~~--~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
..++ .++.. ..............+.+++..||+.||++||++.++++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 238 CPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred ChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 0000 00000 000000000011247789999999999999999998753
No 345
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=7.3e-36 Score=282.60 Aligned_cols=244 Identities=22% Similarity=0.236 Sum_probs=185.7
Q ss_pred eeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHH---HHhhccCCceeeEEEEEeeCCEEEEEEEecc
Q 012219 177 CIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEAR---LLSQIRHRNIVKLYGFCLHRKCMFLIYEYME 252 (468)
Q Consensus 177 ~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~---~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 252 (468)
.||+|+||.||++.. .+++.||+|.+.............+..|.. .++...||+|+++.+++...+..++|+||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 389999999999975 468899999987543321111122334433 4445679999999999999999999999999
Q ss_pred CCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCc
Q 012219 253 MGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNR 332 (468)
Q Consensus 253 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 332 (468)
+|+|.+++.... .+++..+..++.|++.|+.||| +.+++||||||+||+++.++.++|+|||++...... ..
T Consensus 81 g~~L~~~l~~~~---~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~--~~ 152 (278)
T cd05606 81 GGDLHYHLSQHG---VFSEAEMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK--KP 152 (278)
T ss_pred CCcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc--CC
Confidence 999999886543 4899999999999999999999 789999999999999999999999999998765322 22
Q ss_pred eeccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHH
Q 012219 333 TLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDI 411 (468)
Q Consensus 333 ~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (468)
....|+..|+|||++.++ .++.++||||+||++|||++|+.||........... ........+.+....+
T Consensus 153 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~s------- 223 (278)
T cd05606 153 HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI--DRMTLTMAVELPDSFS------- 223 (278)
T ss_pred cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHH--HHHhhccCCCCCCcCC-------
Confidence 234689999999998754 688999999999999999999999975432111100 0001111122222111
Q ss_pred HHHHHHHHhcccCCCCCCC-----CHHHHHH
Q 012219 412 ILVSTVAFSCLRSQPKSRP-----TMQLVSN 437 (468)
Q Consensus 412 ~~l~~l~~~cl~~dP~~RP-----s~~~v~~ 437 (468)
..+.+++.+|+..+|.+|| ++.++++
T Consensus 224 ~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 224 PELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred HHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 2266789999999999999 9999985
No 346
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-38 Score=302.10 Aligned_cols=255 Identities=24% Similarity=0.352 Sum_probs=202.1
Q ss_pred hCccccceeeeeCCceEEEEEcCCCC-EEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPSGK-VVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~~~-~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
+.|.+...||.|+||.||++..++.. ..|.|++..... ..+++|+-|+++|..+.||+||++++.|...+.++++.
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkse---EELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwili 108 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSE---EELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILI 108 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccch---hHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEE
Confidence 44667778999999999999766544 456677754433 45789999999999999999999999999899999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
|||.||.....+-.-+ +.+.+.++..++.|++.||.||| +..|||||||+.|||++-+|.++|+|||.+......
T Consensus 109 EFC~GGAVDaimlEL~--r~LtE~QIqvvc~q~ldALn~LH---s~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t 183 (1187)
T KOG0579|consen 109 EFCGGGAVDAIMLELG--RVLTEDQIQVVCYQVLDALNWLH---SQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKST 183 (1187)
T ss_pred eecCCchHhHHHHHhc--cccchHHHHHHHHHHHHHHHHHh---hcchhhhhccccceEEEecCcEeeecccccccchhH
Confidence 9999999988776543 34889999999999999999999 789999999999999999999999999998665544
Q ss_pred CCCceecccccccccccccc-----CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCcc
Q 012219 329 SSNRTLLAGTYGYIAPELAY-----TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPV 403 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (468)
......+.||+.|||||+.. ..+|+.++||||||+.|.||..+.+|-......+.... +..--.|.+..+
T Consensus 184 ~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllK----iaKSePPTLlqP- 258 (1187)
T KOG0579|consen 184 RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK----IAKSEPPTLLQP- 258 (1187)
T ss_pred HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHH----HhhcCCCcccCc-
Confidence 45566789999999999864 56899999999999999999999999665443322211 111112222211
Q ss_pred chhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHh
Q 012219 404 DQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIA 441 (468)
Q Consensus 404 ~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~ 441 (468)
..+. ..+.+++.+||.++|..||++.+++++-+-
T Consensus 259 -S~Ws---~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv 292 (1187)
T KOG0579|consen 259 -SHWS---RSFSDFLKRCLVKNPRNRPPAAQLLKHPFV 292 (1187)
T ss_pred -chhh---hHHHHHHHHHHhcCCccCCCHHHHhhCccc
Confidence 1111 126678899999999999999998866543
No 347
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.4e-36 Score=294.92 Aligned_cols=268 Identities=25% Similarity=0.314 Sum_probs=200.8
Q ss_pred CccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC-----EE
Q 012219 171 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK-----CM 244 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~ 244 (468)
+|.+.+.||+|++|.||+|... +++.+|+|++...... ....+.+.+|+++++.++|+||+++.+++.... ..
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~ 79 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDD-LIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV 79 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccccc-chhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence 4778899999999999999864 5899999999764321 233467889999999999999999999988765 78
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
+++|||++ ++|.+++.... .+++..++.++.|++.||+||| +.+++||||||+||+++.++.++|+|||++..
T Consensus 80 ~lv~e~~~-~~l~~~l~~~~---~l~~~~~~~i~~~l~~~l~~LH---~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~ 152 (330)
T cd07834 80 YIVTELME-TDLHKVIKSPQ---PLTDDHIQYFLYQILRGLKYLH---SANVIHRDLKPSNILVNSNCDLKICDFGLARG 152 (330)
T ss_pred EEEecchh-hhHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccCceEe
Confidence 99999998 48888886543 5899999999999999999999 78999999999999999999999999999987
Q ss_pred ccCCC---CCceeccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhh--------------
Q 012219 325 LNFDS---SNRTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLD-------------- 386 (468)
Q Consensus 325 ~~~~~---~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~-------------- 386 (468)
..... .......++..|+|||.+.+. .++.++||||||+++|+|++|+.||...........
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 232 (330)
T cd07834 153 VDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLK 232 (330)
T ss_pred ecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhh
Confidence 65432 123334578899999999887 889999999999999999999999865432110000
Q ss_pred --ccccccccc---CCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH-HHhcCCCC
Q 012219 387 --KNIKLIDLL---DPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE-FIARNKAP 446 (468)
Q Consensus 387 --~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~-l~~~~~~~ 446 (468)
......+.+ ..................+.+++.+||+.+|++||++++++.+ |.+..+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~ 298 (330)
T cd07834 233 FITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDP 298 (330)
T ss_pred hccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhccc
Confidence 000000000 0000000000000112236789999999999999999999864 44333333
No 348
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=9.7e-36 Score=286.63 Aligned_cols=247 Identities=27% Similarity=0.370 Sum_probs=192.5
Q ss_pred ccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEe
Q 012219 172 FHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEY 250 (468)
Q Consensus 172 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (468)
|...+.||+|+||.||+|+. .+++.|++|++...........+.+.+|+++++.++|+|++++++++.+....++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 55567799999999999975 46889999998755433333456788999999999999999999999999999999999
Q ss_pred ccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCC
Q 012219 251 MEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSS 330 (468)
Q Consensus 251 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 330 (468)
+. |++.+++.... ..+++.+++.++.|++.|+.||| +.+++|+||+|+||+++.++.++|+|||++....
T Consensus 103 ~~-~~l~~~l~~~~--~~l~~~~~~~~~~qi~~al~~LH---~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~---- 172 (313)
T cd06633 103 CL-GSASDLLEVHK--KPLQEVEIAAITHGALQGLAYLH---SHNMIHRDIKAGNILLTEPGQVKLADFGSASKSS---- 172 (313)
T ss_pred CC-CCHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChhhEEECCCCCEEEeecCCCcccC----
Confidence 96 57777775433 34889999999999999999999 7799999999999999999999999999986432
Q ss_pred Cceecccccccccccccc---CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 331 NRTLLAGTYGYIAPELAY---TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 331 ~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
......|+..|+|||++. ...++.++|||||||++|||++|..||............ .....+.... ...
T Consensus 173 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~----~~~~~~~~~~---~~~ 245 (313)
T cd06633 173 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI----AQNDSPTLQS---NEW 245 (313)
T ss_pred CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH----HhcCCCCCCc---ccc
Confidence 222346888999999874 456888999999999999999999998654322111110 0000011111 001
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
...+.+++.+||+.+|.+||++.+++++
T Consensus 246 ---~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 246 ---TDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred ---CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1126678999999999999999999854
No 349
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=2.2e-36 Score=292.81 Aligned_cols=275 Identities=23% Similarity=0.309 Sum_probs=199.7
Q ss_pred HHHHhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee-CC
Q 012219 165 MIEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH-RK 242 (468)
Q Consensus 165 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~ 242 (468)
+...+++|++.+.||+|+||.||++.. .+++.||+|++....... ...+.+.+|++++..++|||++++.+++.. ..
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTP-VLAKRTYRELKLLKHLRHENIISLSDIFISPLE 83 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccccc-chhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence 344678899999999999999999964 478999999886532221 234567789999999999999999998875 45
Q ss_pred EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccc
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVA 322 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~ 322 (468)
..++++||+ +++|.+++... .+++.....++.|++.||.||| +.+++||||+|+||+++.++.++|+|||.+
T Consensus 84 ~~~lv~e~~-~~~L~~~~~~~----~~~~~~~~~~~~ql~~aL~~LH---~~~iiH~dl~p~Nili~~~~~~~l~dfg~~ 155 (328)
T cd07856 84 DIYFVTELL-GTDLHRLLTSR----PLEKQFIQYFLYQILRGLKYVH---SAGVVHRDLKPSNILINENCDLKICDFGLA 155 (328)
T ss_pred cEEEEeehh-ccCHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEeECCCCCEEeCccccc
Confidence 789999998 56888887642 3778888899999999999999 789999999999999999999999999998
Q ss_pred ccccCCCCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhh-------------hc-
Q 012219 323 RLLNFDSSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSL-------------DK- 387 (468)
Q Consensus 323 ~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~-------------~~- 387 (468)
..... ......++..|+|||.+.+ ..++.++||||||+++|+|+||+.||.......... ..
T Consensus 156 ~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (328)
T cd07856 156 RIQDP---QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINT 232 (328)
T ss_pred cccCC---CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 75432 1223456888999998765 568999999999999999999999986432210000 00
Q ss_pred --cccccccc---CCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH-HHhcCCCCCCCCc
Q 012219 388 --NIKLIDLL---DPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE-FIARNKAPMQKPF 451 (468)
Q Consensus 388 --~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~-l~~~~~~~~~~~~ 451 (468)
.....+.. ......+...........+.+++.+|++.+|++||++.+++.+ +......+...+.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~~~~~~ 302 (328)
T cd07856 233 ICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDPTDEPV 302 (328)
T ss_pred ccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCCccccC
Confidence 00000000 0000000000000111347789999999999999999998854 4444444433333
No 350
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-37 Score=288.11 Aligned_cols=255 Identities=23% Similarity=0.295 Sum_probs=201.9
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
+.|..-..||+|+||.||-++. .+|+.+|.|++.+..........-..+|-.++.+++.+.||.+--.+...+.+++|+
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL 264 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL 264 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence 4577778999999999999965 469999999987665554444456678999999999999999988889999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
..|.||+|.-+|...+. ..+++..++-++.+|+.||++|| +.+||.|||||+|||+|+.|+++|+|+|+|..+..
T Consensus 265 tlMNGGDLkfHiyn~g~-~gF~e~ra~FYAAEi~cGLehlH---~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~- 339 (591)
T KOG0986|consen 265 TLMNGGDLKFHIYNHGN-PGFDEQRARFYAAEIICGLEHLH---RRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPE- 339 (591)
T ss_pred EeecCCceeEEeeccCC-CCCchHHHHHHHHHHHhhHHHHH---hcceeeccCChhheeeccCCCeEeeccceEEecCC-
Confidence 99999999999977654 45999999999999999999999 88999999999999999999999999999998763
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
.......+||.+|||||++.+..|+...|.||+||++|||+.|+.||.....-. ....+...+- ......+..+.
T Consensus 340 g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKv----k~eEvdrr~~-~~~~ey~~kFS 414 (591)
T KOG0986|consen 340 GKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKV----KREEVDRRTL-EDPEEYSDKFS 414 (591)
T ss_pred CCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhh----hHHHHHHHHh-cchhhcccccC
Confidence 344444589999999999999999999999999999999999999996432110 0100000000 00111112222
Q ss_pred HHHHHHHHHHHhcccCCCCCCCC-----HHHHHH
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPT-----MQLVSN 437 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs-----~~~v~~ 437 (468)
++ ...+....|.+||++|.. +++|.+
T Consensus 415 ~e---akslc~~LL~Kdp~~RLGcrg~ga~evk~ 445 (591)
T KOG0986|consen 415 EE---AKSLCEGLLTKDPEKRLGCRGEGAQEVKE 445 (591)
T ss_pred HH---HHHHHHHHHccCHHHhccCCCcCcchhhh
Confidence 33 445666789999999975 456664
No 351
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=5.2e-36 Score=285.15 Aligned_cols=256 Identities=24% Similarity=0.343 Sum_probs=196.4
Q ss_pred CccccceeeeeCCceEEEEEc----CCCCEEEEEEecCcchh-hhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL----PSGKVVALKKLHRSETE-ELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCM 244 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 244 (468)
+|++.+.||+|++|.||++.. .+++.||||+++..... .....+.+.+|++++.++ +|+||+++.+.+......
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 367788999999999999964 35788999998754322 223346788999999999 599999999999999999
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
++||||+++|+|.+++.... .+++..+..++.|+++||.||| ..+++||||+|+||+++.++.++|+|||+++.
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH---~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~ 154 (288)
T cd05583 81 HLILDYVNGGELFTHLYQRE---HFTESEVRVYIAEIVLALDHLH---QLGIIYRDIKLENILLDSEGHVVLTDFGLSKE 154 (288)
T ss_pred EEEEecCCCCcHHHHHhhcC---CcCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHeEECCCCCEEEEECccccc
Confidence 99999999999999987543 3788999999999999999999 78999999999999999999999999999876
Q ss_pred ccCCCCC-ceeccccccccccccccCCC--CCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 325 LNFDSSN-RTLLAGTYGYIAPELAYTMV--VTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 325 ~~~~~~~-~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
....... .....|+..|+|||...+.. .+.++||||||+++|||++|..||.................. ..+....
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~ 233 (288)
T cd05583 155 FLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILK-SKPPFPK 233 (288)
T ss_pred cccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHc-cCCCCCc
Confidence 5433221 22345788999999987654 788999999999999999999998632211110000000000 1111111
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFI 440 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~ 440 (468)
... ..+.+++.+||+.||++|||+.++...|.
T Consensus 234 ~~~-------~~l~~li~~~l~~~p~~R~t~~~~~~~l~ 265 (288)
T cd05583 234 TMS-------AEARDFIQKLLEKDPKKRLGANGADEIKN 265 (288)
T ss_pred ccC-------HHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence 111 12667899999999999999888876654
No 352
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=8.3e-36 Score=284.05 Aligned_cols=254 Identities=25% Similarity=0.357 Sum_probs=193.5
Q ss_pred CccccceeeeeCCceEEEEEc----CCCCEEEEEEecCcchhh-hhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARL----PSGKVVALKKLHRSETEE-LASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCM 244 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 244 (468)
+|++.+.||+|+||.||+++. .+|+.||+|++....... ....+.+.+|++++.++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 367788999999999999975 478999999997543321 12345678899999999 599999999999999999
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
++|+||+++++|.+++.... .+++.....++.|++.||.||| +.+++||||+|+||+++.++.+||+|||++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~---~l~~~~~~~~~~qi~~al~~lH---~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~ 154 (290)
T cd05613 81 HLILDYINGGELFTHLSQRE---RFKEQEVQIYSGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKE 154 (290)
T ss_pred EEEEecCCCCcHHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeEECCCCCEEEeeCcccee
Confidence 99999999999999987543 3788888999999999999999 78999999999999999999999999999976
Q ss_pred ccCCC-CCceeccccccccccccccCC--CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 325 LNFDS-SNRTLLAGTYGYIAPELAYTM--VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 325 ~~~~~-~~~~~~~g~~~y~aPE~~~~~--~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
..... .......|+..|+|||..... .++.++||||||+++|+|++|+.||................ ....+....
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~ 233 (290)
T cd05613 155 FHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRI-LKSEPPYPQ 233 (290)
T ss_pred cccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHh-hccCCCCCc
Confidence 54322 122234588899999998753 46789999999999999999999986322111100000000 001111111
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCC-----CHHHHHHH
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRP-----TMQLVSNE 438 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RP-----s~~~v~~~ 438 (468)
... ..+.+++.+|++.||++|| ++++++.+
T Consensus 234 ~~~-------~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 234 EMS-------ALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred cCC-------HHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 111 2266789999999999997 66777653
No 353
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.4e-36 Score=306.52 Aligned_cols=203 Identities=19% Similarity=0.285 Sum_probs=158.2
Q ss_pred HhhCccccceeeeeCCceEEEEEcCC--CCEEEEEE--------------ecCcchhhhhhHHHHHHHHHHHhhccCCce
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARLPS--GKVVALKK--------------LHRSETEELASLESFGNEARLLSQIRHRNI 231 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~--------------~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni 231 (468)
..++|.+.+.||+|+||+||++..+. +...++|. +.............+.+|++++++++|+||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 35789999999999999999986432 22222221 111001111234568899999999999999
Q ss_pred eeEEEEEeeCCEEEEEEEeccCCChhhhhhcCcc--cCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeC
Q 012219 232 VKLYGFCLHRKCMFLIYEYMEMGSLFCVLRTDEE--AVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLN 309 (468)
Q Consensus 232 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~ 309 (468)
+++++++...+..++++|++. ++|.+++..... .......+...++.||+.||.||| +.+|+||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH---~~gIiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH---DKKLIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEC
Confidence 999999999999999999985 577777654221 112345667789999999999999 78999999999999999
Q ss_pred CCCCeEEeeccccccccCCCC-CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCC
Q 012219 310 SELEAFVADFGVARLLNFDSS-NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHP 374 (468)
Q Consensus 310 ~~~~~kl~Dfg~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p 374 (468)
.++.+||+|||+++.+..... ......|+..|+|||++.+..++.++|||||||++|||++|..+
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~ 367 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFC 367 (501)
T ss_pred CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 999999999999987643322 22235789999999999999999999999999999999998754
No 354
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=9.8e-37 Score=313.31 Aligned_cols=255 Identities=26% Similarity=0.382 Sum_probs=189.7
Q ss_pred HHHhhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee----
Q 012219 166 IEATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH---- 240 (468)
Q Consensus 166 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~---- 240 (468)
.+...+|+....||+||||.||+++.+ ||+.+|||++.... . ........+|+..+++|+|||||+++..+.+
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s-~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~ 552 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-S-DKLYSKILREVKLLARLNHPNVVRYYSAWVESTAE 552 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-H-HHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCc
Confidence 455678999999999999999999754 89999999998765 2 2344567799999999999999999732100
Q ss_pred --------------------------------------------------------------------------------
Q 012219 241 -------------------------------------------------------------------------------- 240 (468)
Q Consensus 241 -------------------------------------------------------------------------------- 240 (468)
T Consensus 553 ~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~ 632 (1351)
T KOG1035|consen 553 LTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSN 632 (1351)
T ss_pred cccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccc
Confidence
Q ss_pred ---------------------------C--------CEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHH
Q 012219 241 ---------------------------R--------KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHAL 285 (468)
Q Consensus 241 ---------------------------~--------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l 285 (468)
. ...||-||||+..++.++++.+.-.. .....++++.+|+.||
T Consensus 633 tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~--~~d~~wrLFreIlEGL 710 (1351)
T KOG1035|consen 633 TSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS--QRDEAWRLFREILEGL 710 (1351)
T ss_pred ccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch--hhHHHHHHHHHHHHHH
Confidence 0 12567889998888888887654211 3567889999999999
Q ss_pred HHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccccc------------------CCCCCceeccccccccccccc
Q 012219 286 SYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLN------------------FDSSNRTLLAGTYGYIAPELA 347 (468)
Q Consensus 286 ~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~------------------~~~~~~~~~~g~~~y~aPE~~ 347 (468)
+|+| +.|+|||||||.||++|++..|||+|||+|+... ......+..+||.-|+|||++
T Consensus 711 aYIH---~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll 787 (1351)
T KOG1035|consen 711 AYIH---DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELL 787 (1351)
T ss_pred HHHH---hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHh
Confidence 9999 8899999999999999999999999999998721 111234557899999999998
Q ss_pred cCC---CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccC
Q 012219 348 YTM---VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRS 424 (468)
Q Consensus 348 ~~~---~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~ 424 (468)
.+. .|+.|+|+||+|||++||+. ||...... . ..+..+-+..++.+ .....+....=.+++.++++.
T Consensus 788 ~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMER-a-----~iL~~LR~g~iP~~-~~f~~~~~~~e~slI~~Ll~h 857 (1351)
T KOG1035|consen 788 SDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMER-A-----SILTNLRKGSIPEP-ADFFDPEHPEEASLIRWLLSH 857 (1351)
T ss_pred cccccccccchhhhHHHHHHHHHHhc---cCCchHHH-H-----HHHHhcccCCCCCC-cccccccchHHHHHHHHHhcC
Confidence 764 59999999999999999995 45432211 1 11111112222222 111112222244688999999
Q ss_pred CCCCCCCHHHHHH
Q 012219 425 QPKSRPTMQLVSN 437 (468)
Q Consensus 425 dP~~RPs~~~v~~ 437 (468)
||.+|||+.|+++
T Consensus 858 dP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 858 DPSKRPTATELLN 870 (1351)
T ss_pred CCccCCCHHHHhh
Confidence 9999999999884
No 355
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=4.9e-36 Score=292.30 Aligned_cols=256 Identities=25% Similarity=0.307 Sum_probs=189.0
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC------C
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR------K 242 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~ 242 (468)
++|.....||+|+||.||+|.. .+|+.||+|++......+ .....+.+|+++++.++|+||+++++++... .
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSE-IFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccc-cchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 6888999999999999999975 578999999987543221 2235678999999999999999999988654 3
Q ss_pred EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccc
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVA 322 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~ 322 (468)
..++|+||+.. +|..+.. ..+++..+..++.|++.||+||| +.+++||||||+||+++.++.++|+|||++
T Consensus 94 ~~~lv~e~~~~-~l~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH---~~~i~H~dlkp~NIll~~~~~~kL~dfg~~ 164 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMG-----HPLSEDKVQYLVYQMLCGLKYIH---SAGIIHRDLKPGNLAVNEDCELKILDFGLA 164 (342)
T ss_pred eEEEEeccccc-CHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEeeCCCC
Confidence 46899999964 6766542 23788999999999999999999 779999999999999999999999999998
Q ss_pred ccccCCCCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhh--c------------
Q 012219 323 RLLNFDSSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLD--K------------ 387 (468)
Q Consensus 323 ~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~--~------------ 387 (468)
+.... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||........... .
T Consensus 165 ~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (342)
T cd07879 165 RHADA---EMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQK 241 (342)
T ss_pred cCCCC---CCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 76432 1223457888999998876 4688999999999999999999999975331110000 0
Q ss_pred --ccccccccC--CCC-CCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 388 --NIKLIDLLD--PRL-SPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 388 --~~~~~~~~~--~~~-~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
......... +.. ..............+.+++.+||+.||++||++++++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h 297 (342)
T cd07879 242 LEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEH 297 (342)
T ss_pred hcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000000 000 000000000111236789999999999999999999943
No 356
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=6e-36 Score=283.93 Aligned_cols=259 Identities=24% Similarity=0.320 Sum_probs=193.6
Q ss_pred ccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CCceeeEEEEEeeCCEEEEEEE
Q 012219 172 FHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIR-HRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 172 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e 249 (468)
|++.+.||+|++|+||+|... +++.|++|++....... ......+|+..+.+++ |+|++++++++...+..++|||
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 78 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSW--EECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFE 78 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccch--hHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence 567788999999999999865 57889999987543321 1223457899999999 9999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|+ +|+|.+++.... ...+++..++.++.|++.+|.||| +.+++|+||+|+||+++.++.++|+|||++.......
T Consensus 79 ~~-~~~l~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh---~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (283)
T cd07830 79 YM-EGNLYQLMKDRK-GKPFSESVIRSIIYQILQGLAHIH---KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP 153 (283)
T ss_pred cC-CCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCCEEEeecccceeccCCC
Confidence 99 789998887654 234899999999999999999999 7799999999999999999999999999997654322
Q ss_pred CCceecccccccccccccc-CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhh--------------cccccccc
Q 012219 330 SNRTLLAGTYGYIAPELAY-TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLD--------------KNIKLIDL 394 (468)
Q Consensus 330 ~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~--------------~~~~~~~~ 394 (468)
......++..|+|||++. ...++.++||||||+++|||++|+.||........... ........
T Consensus 154 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd07830 154 -PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASK 232 (283)
T ss_pred -CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcc
Confidence 223345788999999875 45678999999999999999999999864432111000 00000000
Q ss_pred cCCCCCCcc----chhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 395 LDPRLSPPV----DQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 395 ~~~~~~~~~----~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.+....... ..........+.+++.+||+.+|++|||++|++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 233 LGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred ccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 111111000 00000112347789999999999999999998754
No 357
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=4e-36 Score=284.88 Aligned_cols=260 Identities=25% Similarity=0.310 Sum_probs=196.8
Q ss_pred ccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEe
Q 012219 172 FHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEY 250 (468)
Q Consensus 172 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (468)
|+..+.||+|++|.||+|... +++.+|+|.+...... ....+.+..|++++++++|+|++++++++......++|+||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 79 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEE-EGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEY 79 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccccc-ccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecC
Confidence 456678999999999999764 5899999999865422 12345677899999999999999999999999999999999
Q ss_pred ccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCC
Q 012219 251 MEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSS 330 (468)
Q Consensus 251 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 330 (468)
++ ++|.+++.... ..+++..+..++.|++.||+||| +.+++||||+|+||++++++.++|+|||+++.......
T Consensus 80 ~~-~~l~~~i~~~~--~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 153 (282)
T cd07829 80 CD-MDLKKYLDKRP--GPLSPNLIKSIMYQLLRGLAYCH---SHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR 153 (282)
T ss_pred cC-cCHHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc
Confidence 98 58999997643 24899999999999999999999 77999999999999999999999999999987654333
Q ss_pred CceeccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhh-----------cccccccc--cC
Q 012219 331 NRTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLD-----------KNIKLIDL--LD 396 (468)
Q Consensus 331 ~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~-----------~~~~~~~~--~~ 396 (468)
......++..|+|||.+.+. .++.++|||||||++||+++|+.||........... ......+. .+
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (282)
T cd07829 154 TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYK 233 (282)
T ss_pred ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccccc
Confidence 33334567789999998766 789999999999999999999999864332110000 00000000 00
Q ss_pred CCCCC----ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 397 PRLSP----PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 397 ~~~~~----~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
..... ............+.+++.+||+.+|++||++.+++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 234 PTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred ccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 00000 0000000112247889999999999999999998853
No 358
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=3.5e-36 Score=289.48 Aligned_cols=263 Identities=24% Similarity=0.283 Sum_probs=191.4
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC------
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR------ 241 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 241 (468)
.++|++.+.||+|+||.||+|.. .+++.+|+|++......+. ....+.+|+++++.++|+||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDG-FPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCC-cchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 46899999999999999999975 4689999998865433221 123567899999999999999999987543
Q ss_pred --CEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeec
Q 012219 242 --KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADF 319 (468)
Q Consensus 242 --~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 319 (468)
...++|+||+.+ ++...+.... ..+++..+..++.|+++||.||| +.+++|+||||+||++++++.++|+||
T Consensus 86 ~~~~~~lv~~~~~~-~l~~~~~~~~--~~~~~~~~~~i~~~l~~al~~lH---~~~i~H~dl~p~nil~~~~~~~~l~df 159 (311)
T cd07866 86 KRGSVYMVTPYMDH-DLSGLLENPS--VKLTESQIKCYMLQLLEGINYLH---ENHILHRDIKAANILIDNQGILKIADF 159 (311)
T ss_pred cCceEEEEEecCCc-CHHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEECcC
Confidence 346999999975 6777665432 34899999999999999999999 789999999999999999999999999
Q ss_pred cccccccCCCCC-----------ceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhh-
Q 012219 320 GVARLLNFDSSN-----------RTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLD- 386 (468)
Q Consensus 320 g~~~~~~~~~~~-----------~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~- 386 (468)
|+++........ .....+++.|+|||.+.+ ..++.++|||||||++|||++|++||...........
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~ 239 (311)
T cd07866 160 GLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLI 239 (311)
T ss_pred ccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 999765432211 112346788999998765 4588999999999999999999999864332110000
Q ss_pred -------------ccccccc----ccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 387 -------------KNIKLID----LLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 387 -------------~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
....... ....................+.+++.+|++.||++|||+.+++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 240 FKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred HHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 0000000 000011111000011111347789999999999999999998753
No 359
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=3e-36 Score=282.42 Aligned_cols=253 Identities=26% Similarity=0.334 Sum_probs=193.2
Q ss_pred CccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhh--hhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEE--LASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
+|.+.+.||+|+||.||++... .+..+++|.++.....+ ......+..|+.+++.++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 4778899999999999999754 34456666655422211 11223566789999999999999999999998899999
Q ss_pred EEeccCCChhhhhhcC-cccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccccc
Q 012219 248 YEYMEMGSLFCVLRTD-EEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLN 326 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 326 (468)
+||+++++|.+++... .....+++.+++.++.|++.||.||| +.+++|+||+|+||+++. +.++|+|||+++...
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH---~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMH---QRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH---HcCccccCCChhheEeec-CCEeecccCceeecC
Confidence 9999999999988642 22345899999999999999999999 789999999999999976 569999999997764
Q ss_pred CCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchh
Q 012219 327 FDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQK 406 (468)
Q Consensus 327 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (468)
..........++..|+|||......++.++||||||+++|+|++|..||.......... .......+.....
T Consensus 157 ~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~---- 228 (260)
T cd08222 157 GSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVL----RIVEGPTPSLPET---- 228 (260)
T ss_pred CCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHH----HHHcCCCCCCcch----
Confidence 43333334567889999999888888999999999999999999999986432211110 1111111111111
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
....+.+++.+||+.+|++||++.+++++
T Consensus 229 ---~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 229 ---YSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred ---hcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 11236779999999999999999999864
No 360
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=7.6e-36 Score=277.81 Aligned_cols=239 Identities=27% Similarity=0.371 Sum_probs=193.4
Q ss_pred eeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEeccCCCh
Q 012219 178 IGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYMEMGSL 256 (468)
Q Consensus 178 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 256 (468)
||+|+||.||++... +++.+|+|.+.............+..|++++++++|+|++++++.+..+...+++|||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999764 5899999998776544334556788999999999999999999999999999999999999999
Q ss_pred hhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCceecc
Q 012219 257 FCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRTLLA 336 (468)
Q Consensus 257 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~ 336 (468)
.+++.... .+++.....++.|++.|+.||| +.+++|+||+|+||+++.++.++|+|||++..............
T Consensus 81 ~~~l~~~~---~l~~~~~~~~~~qi~~~l~~lh---~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~ 154 (250)
T cd05123 81 FSHLSKEG---RFSEERARFYAAEIVLALEYLH---SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFC 154 (250)
T ss_pred HHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCc
Confidence 99997653 3889999999999999999999 78999999999999999999999999999977644323334456
Q ss_pred ccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHHHH
Q 012219 337 GTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVST 416 (468)
Q Consensus 337 g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 416 (468)
++..|+|||...+...+.++|+||||+++|++++|+.||........ ... ... ....+....+ ..+.+
T Consensus 155 ~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~-~~~---~~~-~~~~~~~~~~-------~~l~~ 222 (250)
T cd05123 155 GTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEI-YEK---ILK-DPLRFPEFLS-------PEARD 222 (250)
T ss_pred CCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH-HHH---Hhc-CCCCCCCCCC-------HHHHH
Confidence 88899999999888889999999999999999999999865432111 000 000 1111111111 22667
Q ss_pred HHHhcccCCCCCCCCHHH
Q 012219 417 VAFSCLRSQPKSRPTMQL 434 (468)
Q Consensus 417 l~~~cl~~dP~~RPs~~~ 434 (468)
++.+||..||++||++.+
T Consensus 223 ~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 223 LISGLLQKDPTKRLGSGG 240 (250)
T ss_pred HHHHHhcCCHhhCCCccc
Confidence 999999999999999943
No 361
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-37 Score=298.67 Aligned_cols=203 Identities=33% Similarity=0.499 Sum_probs=176.5
Q ss_pred ccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC------CEE
Q 012219 172 FHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR------KCM 244 (468)
Q Consensus 172 ~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~ 244 (468)
+...+.||+|+||.||+|+ ..+|+.||||.++.... ....+...+|++++++++|+|||+++++-... +..
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~--~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~ 92 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESS--LRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLP 92 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcc--cchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccc
Confidence 3445679999999999998 56799999999987542 23457788999999999999999999876543 357
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeC--CCC--CeEEeecc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLN--SEL--EAFVADFG 320 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~--~~~--~~kl~Dfg 320 (468)
.+|||||.+|||+..+....+..++++.+.+.++.+++.||.||| ..+|+||||||.||++- .+| .-||+|||
T Consensus 93 vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~Lr---En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG 169 (732)
T KOG4250|consen 93 VLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLR---ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFG 169 (732)
T ss_pred eEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHH---HcCceeccCCCCcEEEeecCCCceEEeeeccc
Confidence 899999999999999999998899999999999999999999999 77999999999999983 333 35899999
Q ss_pred ccccccCCCCCceecccccccccccccc-CCCCCccchhhHHHHHHHHHHhCCCCCCcccc
Q 012219 321 VARLLNFDSSNRTLLAGTYGYIAPELAY-TMVVTEKCDVYSFGVVALEVLMGKHPGELLSS 380 (468)
Q Consensus 321 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~ 380 (468)
.|+.++. .......+||..|.+||+.. ...|+..+|.|||||++|+..||..||.....
T Consensus 170 ~Arel~d-~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~ 229 (732)
T KOG4250|consen 170 AARELDD-NSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGG 229 (732)
T ss_pred ccccCCC-CCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCC
Confidence 9999874 44667789999999999998 48899999999999999999999999975443
No 362
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=9.9e-37 Score=269.77 Aligned_cols=258 Identities=25% Similarity=0.334 Sum_probs=199.1
Q ss_pred hhCcccc-ceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEee----C
Q 012219 169 TEDFHIK-YCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLH----R 241 (468)
Q Consensus 169 ~~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~----~ 241 (468)
+++|.+. ++||-|-.|.|-.+.. .+++.+|+|++.... ..++|+++--.. .|||||.+++++.. .
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~--------KARrEVeLHw~~s~h~~iV~IidVyeNs~~~r 131 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSP--------KARREVELHWMASGHPHIVSIIDVYENSYQGR 131 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCH--------HHHhHhhhhhhhcCCCceEEeehhhhhhccCc
Confidence 4566554 5699999999999954 578999999997543 234788765555 59999999998864 4
Q ss_pred CEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC---CCCeEEee
Q 012219 242 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS---ELEAFVAD 318 (468)
Q Consensus 242 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~---~~~~kl~D 318 (468)
..+++|||.|+||.|+..++..+. ..+.+.++-.|+.||+.|+.||| +..|.||||||+|+|.+. |..+||+|
T Consensus 132 kcLLiVmE~meGGeLfsriq~~g~-~afTErea~eI~~qI~~Av~~lH---~~nIAHRDlKpENLLyt~t~~na~lKLtD 207 (400)
T KOG0604|consen 132 KCLLIVMECMEGGELFSRIQDRGD-QAFTEREASEIMKQIGLAVRYLH---SMNIAHRDLKPENLLYTTTSPNAPLKLTD 207 (400)
T ss_pred eeeEeeeecccchHHHHHHHHccc-ccchHHHHHHHHHHHHHHHHHHH---hcchhhccCChhheeeecCCCCcceEecc
Confidence 568899999999999999987553 34899999999999999999999 889999999999999965 45789999
Q ss_pred ccccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCC
Q 012219 319 FGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPR 398 (468)
Q Consensus 319 fg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 398 (468)
||+|+.-.. .......+.|+.|.|||++...+|+..+|+||+||++|-|++|.+||........+..- ......-.-.
T Consensus 208 fGFAK~t~~-~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgM-k~rI~~gqy~ 285 (400)
T KOG0604|consen 208 FGFAKETQE-PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM-KRRIRTGQYE 285 (400)
T ss_pred cccccccCC-CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhH-HhHhhccCcc
Confidence 999987542 34455668899999999999999999999999999999999999999755432222111 1111111223
Q ss_pred CCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH-HHHhcC
Q 012219 399 LSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN-EFIARN 443 (468)
Q Consensus 399 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~-~l~~~~ 443 (468)
++.+.+..+++. ..++|+.+|..+|.+|.|++++++ .|-...
T Consensus 286 FP~pEWs~VSe~---aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~ 328 (400)
T KOG0604|consen 286 FPEPEWSCVSEA---AKDLIRKLLKTEPTERLTIEEVMDHPWINQY 328 (400)
T ss_pred CCChhHhHHHHH---HHHHHHHHhcCCchhheeHHHhhcCchhccc
Confidence 344444444443 456888999999999999999984 454443
No 363
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-36 Score=264.13 Aligned_cols=253 Identities=22% Similarity=0.345 Sum_probs=194.4
Q ss_pred CccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CCceeeEEEEEeeCCEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIR-HRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 248 (468)
+.+....||.|..|.|++++.+ .|..+|||.+.+....+ +.+.+...++++..-+ +|.||+.+|||..+...++.|
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nke--e~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcM 170 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKE--ENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICM 170 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHH--HHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHH
Confidence 3444566999999999999765 58999999998876543 4577778888776664 899999999999998889999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
|.|.. .+..++..-.. ++++.-.-++...+.+||.||.. +++|+|||+||+|||+|+.|++|++|||.+-.+- +
T Consensus 171 elMs~-C~ekLlkrik~--piPE~ilGk~tva~v~AL~YLKe--KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlv-d 244 (391)
T KOG0983|consen 171 ELMST-CAEKLLKRIKG--PIPERILGKMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLV-D 244 (391)
T ss_pred HHHHH-HHHHHHHHhcC--CchHHhhhhhHHHHHHHHHHHHH--hcceeecccCccceEEccCCCEEeecccccceee-c
Confidence 98853 45555554333 36777777888999999999986 6799999999999999999999999999997764 3
Q ss_pred CCCceeccccccccccccccC---CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccch
Q 012219 329 SSNRTLLAGTYGYIAPELAYT---MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQ 405 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (468)
+...+...|-+.|||||.+.. ..|+-++||||||+.++||.||+.||..-...-..... +.+-..|.++....
T Consensus 245 SkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltk---vln~ePP~L~~~~g- 320 (391)
T KOG0983|consen 245 SKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTK---VLNEEPPLLPGHMG- 320 (391)
T ss_pred ccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHH---HHhcCCCCCCcccC-
Confidence 444555678899999998864 36889999999999999999999999865443222211 11112233333221
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 406 KIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 406 ~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
+.. .+.+++..||++|+.+||...+++++=
T Consensus 321 -FSp---~F~~fv~~CL~kd~r~RP~Y~~Ll~h~ 350 (391)
T KOG0983|consen 321 -FSP---DFQSFVKDCLTKDHRKRPKYNKLLEHP 350 (391)
T ss_pred -cCH---HHHHHHHHHhhcCcccCcchHHHhcCc
Confidence 111 266789999999999999999888553
No 364
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.4e-35 Score=289.02 Aligned_cols=257 Identities=25% Similarity=0.311 Sum_probs=192.0
Q ss_pred HhhCccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC----
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK---- 242 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~---- 242 (468)
..++|.+.+.||+|+||.||++. ..++..||||++...... ....+.+.+|++++++++|+||+++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQS-ELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccc-hHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 45789999999999999999996 457899999998654322 123356779999999999999999999887543
Q ss_pred --EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecc
Q 012219 243 --CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFG 320 (468)
Q Consensus 243 --~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 320 (468)
..++|+||+ +++|.+++.. ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.++|+|||
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~----~~l~~~~~~~i~~qi~~al~~LH---~~gi~H~dlkp~Nill~~~~~~kl~dfg 163 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKH----EKLSEDRIQFLVYQMLKGLKYIH---AAGIIHRDLKPGNLAVNEDCELKILDFG 163 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecc
Confidence 358999999 6789888753 23889999999999999999999 7899999999999999999999999999
Q ss_pred ccccccCCCCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhc---cc----ccc
Q 012219 321 VARLLNFDSSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDK---NI----KLI 392 (468)
Q Consensus 321 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~---~~----~~~ 392 (468)
++...... .....+++.|+|||.+.+ ..++.++||||||+++|++++|+.||............ .. ...
T Consensus 164 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 240 (343)
T cd07880 164 LARQTDSE---MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFV 240 (343)
T ss_pred cccccccC---ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHH
Confidence 99765322 223457889999998875 45889999999999999999999999754321110000 00 000
Q ss_pred cccC-----------CCCCC-ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHH
Q 012219 393 DLLD-----------PRLSP-PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVS 436 (468)
Q Consensus 393 ~~~~-----------~~~~~-~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~ 436 (468)
+.+. +.... ............+.+++.+|++.||++|||+.+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l 296 (343)
T cd07880 241 QKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEAL 296 (343)
T ss_pred HhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHh
Confidence 0000 00000 00000001112367899999999999999999988
No 365
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=5.8e-36 Score=291.89 Aligned_cols=272 Identities=23% Similarity=0.290 Sum_probs=198.8
Q ss_pred HhhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCE---
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKC--- 243 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~--- 243 (468)
..++|.+...||+|++|.||+|+.. +++.||+|++....... ...+.+.+|+.+++.++|+|++++.+++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSA-IHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchh-hHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 3567999999999999999999764 68899999987543221 233567789999999999999999987765544
Q ss_pred ---EEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecc
Q 012219 244 ---MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFG 320 (468)
Q Consensus 244 ---~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg 320 (468)
.++|+||+ +++|.+++.. ..+++..+..++.|++.||.||| +.+|+||||+|+||+++.++.++|+|||
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~ql~~aL~~LH---~~gi~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKC----QKLSDDHIQFLVYQILRGLKYIH---SAGIIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEECCCCCEEEcccc
Confidence 89999998 5799988864 23899999999999999999999 7899999999999999999999999999
Q ss_pred ccccccCCCCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhc---cc-c-----
Q 012219 321 VARLLNFDSSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDK---NI-K----- 390 (468)
Q Consensus 321 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~---~~-~----- 390 (468)
++...... .....++..|+|||...+ ..++.++|||||||++||++||+.||............ .. .
T Consensus 164 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 240 (343)
T cd07851 164 LARHTDDE---MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELL 240 (343)
T ss_pred cccccccc---ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHH
Confidence 99765422 233457889999998765 46788999999999999999999998643321110000 00 0
Q ss_pred -------cccc---cCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH-HHHhcCCCCCCCCc
Q 012219 391 -------LIDL---LDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN-EFIARNKAPMQKPF 451 (468)
Q Consensus 391 -------~~~~---~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~-~l~~~~~~~~~~~~ 451 (468)
.... +..................+.+++.+|++.+|++|||+.+++. .|......+...+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~~~~~~ 312 (343)
T cd07851 241 QKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDPEDEPV 312 (343)
T ss_pred hhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCCccccc
Confidence 0000 0000000000000011234778999999999999999999974 34443344334443
No 366
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-36 Score=272.39 Aligned_cols=248 Identities=25% Similarity=0.351 Sum_probs=202.3
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|...+.||+|.||+|..++- .+++.+|+|++++...-.......-..|-++++..+||.+..+.-.++..+.+|.|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 36788899999999999999974 57999999999887655555566677899999999999999998888899999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|||..||.|.-+|.... .+++....-.-..|..||.||| +.+||.||||.+|.|+|.||++||+|||+++.--.
T Consensus 247 MeyanGGeLf~HLsrer---~FsE~RtRFYGaEIvsAL~YLH---s~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~ 320 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRER---VFSEDRTRFYGAEIVSALGYLH---SRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK 320 (516)
T ss_pred EEEccCceEeeehhhhh---cccchhhhhhhHHHHHHhhhhh---hCCeeeeechhhhheeccCCceEeeecccchhccc
Confidence 99999999998887543 3788888888899999999999 78999999999999999999999999999986544
Q ss_pred CCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccccccccc---CCCCCCccc
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLL---DPRLSPPVD 404 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 404 (468)
.......++||+.|+|||++....|+.++|.|.+||++|||++|+.||...... ++.+++ |-+++....
T Consensus 321 ~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~--------kLFeLIl~ed~kFPr~ls 392 (516)
T KOG0690|consen 321 YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE--------KLFELILMEDLKFPRTLS 392 (516)
T ss_pred ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh--------HHHHHHHhhhccCCccCC
Confidence 555667789999999999999999999999999999999999999999754322 112211 222222222
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCC-----HHHHHH
Q 012219 405 QKIRQDIILVSTVAFSCLRSQPKSRPT-----MQLVSN 437 (468)
Q Consensus 405 ~~~~~~~~~l~~l~~~cl~~dP~~RPs-----~~~v~~ 437 (468)
. + -..+....+.+||.+|.. +.||.+
T Consensus 393 ~----e---AktLLsGLL~kdP~kRLGgGpdDakEi~~ 423 (516)
T KOG0690|consen 393 P----E---AKTLLSGLLKKDPKKRLGGGPDDAKEIMR 423 (516)
T ss_pred H----H---HHHHHHHHhhcChHhhcCCCchhHHHHHh
Confidence 1 1 223556789999999963 556653
No 367
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-37 Score=319.95 Aligned_cols=255 Identities=27% Similarity=0.428 Sum_probs=201.9
Q ss_pred hCccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
-++.....||.|.||.||.|. ..+|...|+|-++..... ....+...+|+.++..++|||+|+++|+-.+++..+|.|
T Consensus 1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~-~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD-HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc-cccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence 456667889999999999995 667999999988765544 456678889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
|||++|+|.+.++.... .++.....+..|++.|++||| +.|||||||||.||+++.+|.+|++|||.|..+...
T Consensus 1314 EyC~~GsLa~ll~~gri---~dE~vt~vyt~qll~gla~LH---~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~ 1387 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEHGRI---EDEMVTRVYTKQLLEGLAYLH---EHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNN 1387 (1509)
T ss_pred HHhccCcHHHHHHhcch---hhhhHHHHHHHHHHHHHHHHH---hcCceecCCCccceeeecCCcEEeecccceeEecCc
Confidence 99999999999975433 566666678899999999999 789999999999999999999999999999887543
Q ss_pred CC----CceeccccccccccccccCC---CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 329 SS----NRTLLAGTYGYIAPELAYTM---VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 329 ~~----~~~~~~g~~~y~aPE~~~~~---~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
.. ......||+.|||||++.+. ....+.||||+||+..||+||+.||..++.. |......... -.|.++.
T Consensus 1388 ~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne-~aIMy~V~~g--h~Pq~P~ 1464 (1509)
T KOG4645|consen 1388 AQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE-WAIMYHVAAG--HKPQIPE 1464 (1509)
T ss_pred hhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch-hHHHhHHhcc--CCCCCch
Confidence 21 12235799999999999754 3567899999999999999999999765542 3332221111 1122222
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHh
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIA 441 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~ 441 (468)
. +.. +=.+++..|++.||++|-++.|++++=+.
T Consensus 1465 ~----ls~---~g~dFle~Cl~~dP~~Rw~~~qlle~~f~ 1497 (1509)
T KOG4645|consen 1465 R----LSS---EGRDFLEHCLEQDPKMRWTASQLLEHAFG 1497 (1509)
T ss_pred h----hhH---hHHHHHHHHHhcCchhhhHHHHHHHhhcc
Confidence 1 111 14468889999999999888888766554
No 368
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=2.1e-35 Score=287.91 Aligned_cols=261 Identities=23% Similarity=0.281 Sum_probs=189.9
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeC-------
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHR------- 241 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------- 241 (468)
.+|.+.+.||+|+||.||+|.. .+++.||+|++...... ..+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~---~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQ---SVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTED 81 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCc---hHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccc
Confidence 5788999999999999999975 56899999998765432 346788999999999999999999776543
Q ss_pred -------CEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC-CCC
Q 012219 242 -------KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS-ELE 313 (468)
Q Consensus 242 -------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~-~~~ 313 (468)
...++|+||++ ++|.+++... .+++.....++.||+.||.||| +.+++||||||+||+++. ++.
T Consensus 82 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH---~~givH~dikp~Nili~~~~~~ 153 (342)
T cd07854 82 VGSLTELNSVYIVQEYME-TDLANVLEQG----PLSEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANVFINTEDLV 153 (342)
T ss_pred cccccccceEEEEeeccc-ccHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCce
Confidence 35789999997 5888877532 3889999999999999999999 779999999999999974 567
Q ss_pred eEEeeccccccccCCCC---CceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhc--
Q 012219 314 AFVADFGVARLLNFDSS---NRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDK-- 387 (468)
Q Consensus 314 ~kl~Dfg~~~~~~~~~~---~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~-- 387 (468)
++++|||.++....... ......++..|+|||.+.. ..++.++|||||||++|||++|+.||............
T Consensus 154 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~ 233 (342)
T cd07854 154 LKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILE 233 (342)
T ss_pred EEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 89999999976532211 1122357888999997654 56888999999999999999999999644321110000
Q ss_pred ---------ccccc----cccC---CCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHH-HHHHh
Q 012219 388 ---------NIKLI----DLLD---PRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVS-NEFIA 441 (468)
Q Consensus 388 ---------~~~~~----~~~~---~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~-~~l~~ 441 (468)
..... .... .....+...........+.+++.+|++.||++|||+.+++ +.+.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~ 304 (342)
T cd07854 234 SVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMS 304 (342)
T ss_pred hcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccc
Confidence 00000 0000 0000000000001112367899999999999999999998 34443
No 369
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=9.9e-35 Score=304.72 Aligned_cols=148 Identities=27% Similarity=0.417 Sum_probs=132.3
Q ss_pred hCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
++|.+.+.||+|+||.||+|... +++.||+|++.............+..|+.++..++|+||+++++++......++||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57889999999999999999764 68999999997654433344567889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccc
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVAR 323 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~ 323 (468)
||+.+++|.+++.... .+++..++.++.||+.||.||| ..+|+||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~~~---~l~~~~~~~i~~qil~aL~yLH---~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIYG---YFDEEMAVKYISEVALALDYLH---RHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 9999999999997543 3788889999999999999999 7799999999999999999999999999986
No 370
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=5.7e-35 Score=283.72 Aligned_cols=258 Identities=24% Similarity=0.304 Sum_probs=187.3
Q ss_pred CccccceeeeeCCceEEEEEcC-C--CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeC----C
Q 012219 171 DFHIKYCIGTGGYGSVYRARLP-S--GKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHR----K 242 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~-~--~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~----~ 242 (468)
+|++.+.||+|+||.||+++.. + +..||+|++...... ....+.+.+|++++.++ +|+||+++++++... .
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSK-KILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccccc-chhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence 4777889999999999999754 3 788999998643221 12245678899999999 599999999875432 4
Q ss_pred EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccc
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVA 322 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~ 322 (468)
..++++||+. ++|.+++.... .+++..+..++.||+.||.||| +.+++||||||+||+++.++.+||+|||++
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~qi~~aL~~LH---~~givH~dlkp~Nili~~~~~~kl~Dfg~a 152 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRSGQ---PLTDAHFQSFIYQILCGLKYIH---SANVLHRDLKPGNLLVNADCELKICDFGLA 152 (332)
T ss_pred cEEEEEeccc-CCHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHeEEcCCCCEEeCcCCCc
Confidence 5788899886 68988886533 3889999999999999999999 789999999999999999999999999999
Q ss_pred ccccCCCC----CceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhh-----------
Q 012219 323 RLLNFDSS----NRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLD----------- 386 (468)
Q Consensus 323 ~~~~~~~~----~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~----------- 386 (468)
+....... ......|+..|+|||+..+ ..++.++|||||||++|+|++|+.||...........
T Consensus 153 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 232 (332)
T cd07857 153 RGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEE 232 (332)
T ss_pred eecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 76542211 1223468899999998765 4688999999999999999999999875331100000
Q ss_pred ---c--ccccccc---cCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHH
Q 012219 387 ---K--NIKLIDL---LDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVS 436 (468)
Q Consensus 387 ---~--~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~ 436 (468)
. ....... ...................+.+++.+|++.||++|||+.+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll 290 (332)
T cd07857 233 TLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEAL 290 (332)
T ss_pred HHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHh
Confidence 0 0000000 000000000000000112377899999999999999998887
No 371
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=5e-36 Score=266.54 Aligned_cols=203 Identities=27% Similarity=0.364 Sum_probs=168.5
Q ss_pred hhCccccceeeeeCCceEEEEEc-C--C--CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee-CC
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-P--S--GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH-RK 242 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~--~--~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~ 242 (468)
...|+....||+|.||.||+|.- + + .+.+|+|+++..+..+.- -....+|+.+++.++|||++.+..++.. +.
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGi-S~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~ 101 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGI-SMSACREIALLRELKHPNVISLVKVFLSHDK 101 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCc-CHHHHHHHHHHHHhcCCcchhHHHHHhccCc
Confidence 45688899999999999999942 2 2 347899999877544322 2455699999999999999999998877 78
Q ss_pred EEEEEEEeccCCChhhhhhcC--cccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC----CCeEE
Q 012219 243 CMFLIYEYMEMGSLFCVLRTD--EEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSE----LEAFV 316 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~--~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~----~~~kl 316 (468)
..++++||.+. +|...++.. .....++...+.+|+.||+.|+.||| +.=|+||||||.|||+..+ |.|||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH---~NWvlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH---SNWVLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh---hhheeeccCCcceEEEeccCCccCeeEe
Confidence 89999999986 888877543 33456888899999999999999999 6679999999999999988 99999
Q ss_pred eeccccccccCCCCC---ceeccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCC
Q 012219 317 ADFGVARLLNFDSSN---RTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGE 376 (468)
Q Consensus 317 ~Dfg~~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~ 376 (468)
+|+|+++.+...-.. ....+-|..|+|||++.+. .||.+.||||.|||+.||+|-++-|.
T Consensus 178 aDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~ 241 (438)
T KOG0666|consen 178 ADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFK 241 (438)
T ss_pred ecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCcccc
Confidence 999999998643332 2335678999999998875 58999999999999999999887764
No 372
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-35 Score=264.70 Aligned_cols=260 Identities=25% Similarity=0.395 Sum_probs=199.4
Q ss_pred CHHHHHHHhhCccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CCceeeEEEEE
Q 012219 161 TFQDMIEATEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEELASLESFGNEARLLSQIR-HRNIVKLYGFC 238 (468)
Q Consensus 161 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~ 238 (468)
+|+|+.+.|+ +.||+|+|+.|--+. ..+|..+|||++.+... .......+|++++.+.+ |+||+.+++|+
T Consensus 74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~g---HsR~RvfREVe~f~~Cqgh~nilqLiefF 145 (463)
T KOG0607|consen 74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPG---HSRSRVFREVETFYQCQGHKNILQLIEFF 145 (463)
T ss_pred hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCc---hHHHHHHHHHHHHHHhcCCccHHHHHHHh
Confidence 4777777775 559999999999884 67899999999987643 34567779999999985 99999999999
Q ss_pred eeCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC---CeE
Q 012219 239 LHRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSEL---EAF 315 (468)
Q Consensus 239 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~---~~k 315 (468)
+++...|||||-|.||+|..+++.... +++.++.++..+|+.||.||| .+||.||||||+|||-.... -+|
T Consensus 146 Edd~~FYLVfEKm~GGplLshI~~~~~---F~E~EAs~vvkdia~aLdFlH---~kgIAHRDlKPENiLC~~pn~vsPvK 219 (463)
T KOG0607|consen 146 EDDTRFYLVFEKMRGGPLLSHIQKRKH---FNEREASRVVKDIASALDFLH---TKGIAHRDLKPENILCESPNKVSPVK 219 (463)
T ss_pred cccceEEEEEecccCchHHHHHHHhhh---ccHHHHHHHHHHHHHHHHHHh---hcCcccccCCccceeecCCCCcCcee
Confidence 999999999999999999999987554 899999999999999999999 89999999999999996654 479
Q ss_pred EeeccccccccCCC-------CCceecccccccccccccc-----CCCCCccchhhHHHHHHHHHHhCCCCCCccc--cc
Q 012219 316 VADFGVARLLNFDS-------SNRTLLAGTYGYIAPELAY-----TMVVTEKCDVYSFGVVALEVLMGKHPGELLS--SS 381 (468)
Q Consensus 316 l~Dfg~~~~~~~~~-------~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~--~~ 381 (468)
|+||.++.-+.... ......+|+..|||||+.. ...|+.++|.||+|||+|-|++|.+||...= .-
T Consensus 220 iCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dC 299 (463)
T KOG0607|consen 220 ICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADC 299 (463)
T ss_pred eeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcC
Confidence 99999875442211 1223457899999999763 3468999999999999999999999996431 11
Q ss_pred chhhhc-----ccccccccCC---CCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 382 SWSLDK-----NIKLIDLLDP---RLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 382 ~~~~~~-----~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
.|.... ...+.+-+.. .++...+..+..+ -.+++...+..|+.+|.++.++++
T Consensus 300 GWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~e---akdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 300 GWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSE---AKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred CccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHH---HHHHHHHHHhccHHhhhhhhhccC
Confidence 222111 1111121211 1222222233333 345677788899999999999987
No 373
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-35 Score=269.02 Aligned_cols=265 Identities=20% Similarity=0.281 Sum_probs=209.1
Q ss_pred HHHHHHHhhCccccceeeeeCCceEEEEEcC------CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEE
Q 012219 162 FQDMIEATEDFHIKYCIGTGGYGSVYRARLP------SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLY 235 (468)
Q Consensus 162 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~ 235 (468)
.+++.....++.....+-+|.||.||.|-+. +.+.|-||.++....+ -+...|..|.-++..+.|||+.++.
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~--iQv~~~L~es~lly~~sH~nll~V~ 353 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQ--IQVNLLLQESMLLYGASHPNLLSVL 353 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccH--HHHHHHHHHHHHHhcCcCCCcccee
Confidence 4556666678888889999999999999543 4456778887765443 3456788999999999999999999
Q ss_pred EEEeeC-CEEEEEEEeccCCChhhhhh-----cCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeC
Q 012219 236 GFCLHR-KCMFLIYEYMEMGSLFCVLR-----TDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLN 309 (468)
Q Consensus 236 ~~~~~~-~~~~lv~e~~~~gsL~~~l~-----~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~ 309 (468)
+++.+. ...+++|.++.-|+|..++. .......+...+...++.|++.|++||| +.++||.||.++|.++|
T Consensus 354 ~V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh---~~~ViHkDiAaRNCvId 430 (563)
T KOG1024|consen 354 GVSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH---NHGVIHKDIAARNCVID 430 (563)
T ss_pred EEEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH---hcCcccchhhhhcceeh
Confidence 998764 56789999999999999998 4444556788899999999999999999 88999999999999999
Q ss_pred CCCCeEEeeccccccccCCCCCc--eeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhh
Q 012219 310 SELEAFVADFGVARLLNFDSSNR--TLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLD 386 (468)
Q Consensus 310 ~~~~~kl~Dfg~~~~~~~~~~~~--~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~ 386 (468)
+..++||+|=.+++.+.+..+.. .....+..||+||.+....|+.++|||||||+||||+| |+.|+-..+.......
T Consensus 431 d~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~y 510 (563)
T KOG1024|consen 431 DQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHY 510 (563)
T ss_pred hheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHH
Confidence 99999999999999875433321 12235678999999999999999999999999999999 9999876543221111
Q ss_pred cccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 387 KNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
- .+ ..++..+. ++..+++.++..||..+|++||++++++.-|.+-
T Consensus 511 l----kd--GyRlaQP~-----NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF 555 (563)
T KOG1024|consen 511 L----KD--GYRLAQPF-----NCPDELFTVMACCWALLPEERPSFSQLVICLSEF 555 (563)
T ss_pred H----hc--cceecCCC-----CCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 0 00 01122222 2333488899999999999999999999888654
No 374
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-34 Score=288.18 Aligned_cols=255 Identities=25% Similarity=0.408 Sum_probs=207.7
Q ss_pred HHhhCccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEee----
Q 012219 167 EATEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLH---- 240 (468)
Q Consensus 167 ~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~---- 240 (468)
..++-|++.+.||.|.+|.||+++ .++++.+|+|++......+ ++...|.++++.. .|||++.++|++..
T Consensus 16 dp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~d----eEiE~eynil~~~~~hpnv~~fyg~~~k~~~~ 91 (953)
T KOG0587|consen 16 DPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEE----EEIELEYNMLKKYSHHPNVATFYGAFIKKDPG 91 (953)
T ss_pred CCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcccc----HHHHHHHHHHHhccCCCCcceEEEEEEEecCC
Confidence 345678999999999999999996 5678999999998766543 3455788888887 69999999999864
Q ss_pred -CCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeec
Q 012219 241 -RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADF 319 (468)
Q Consensus 241 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Df 319 (468)
++.++||||||.+||..|++.... ...+.|..+..|+..++.|+.+|| ...++|||+|-.|||++.++.||+.||
T Consensus 92 ~~DqLWLVMEfC~gGSVTDLVKn~~-g~rl~E~~IaYI~re~lrgl~HLH---~nkviHRDikG~NiLLT~e~~VKLvDF 167 (953)
T KOG0587|consen 92 NGDQLWLVMEFCGGGSVTDLVKNTK-GNRLKEEWIAYILREILRGLAHLH---NNKVIHRDIKGQNVLLTENAEVKLVDF 167 (953)
T ss_pred CCCeEEEEeeccCCccHHHHHhhhc-ccchhhHHHHHHHHHHHHHHHHHh---hcceeeecccCceEEEeccCcEEEeee
Confidence 568999999999999999998766 556999999999999999999999 778999999999999999999999999
Q ss_pred cccccccCCCCCceeccccccccccccccCC-----CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccc
Q 012219 320 GVARLLNFDSSNRTLLAGTYGYIAPELAYTM-----VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDL 394 (468)
Q Consensus 320 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 394 (468)
|.+..+...........||+.|||||++... .|+..+|+||+|++..||--|.+|+-++......+.. ...
T Consensus 168 GvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~I----pRN 243 (953)
T KOG0587|consen 168 GVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI----PRN 243 (953)
T ss_pred eeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccC----CCC
Confidence 9999887766777778999999999998643 4778999999999999999999998766543332211 111
Q ss_pred cCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 395 LDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
..|.+.. +..+ ..++.++|..|+.+|.++||++.+++++
T Consensus 244 PPPkLkr--p~kW---s~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 244 PPPKLKR--PKKW---SKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred CCccccc--hhhH---HHHHHHHHHHHHhhccccCcchhhhccC
Confidence 1122221 1222 2347789999999999999999888754
No 375
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=5.8e-34 Score=263.08 Aligned_cols=219 Identities=23% Similarity=0.203 Sum_probs=173.4
Q ss_pred eCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEeccCCChhhh
Q 012219 181 GGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYMEMGSLFCV 259 (468)
Q Consensus 181 G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~ 259 (468)
|.+|.||++.. .+++.+|+|++..... +.+|...+....|||++++++++...+..+++|||+++|+|.++
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 75 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE--------YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSH 75 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh--------hhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHH
Confidence 88999999965 5789999999976432 22455555566799999999999999999999999999999999
Q ss_pred hhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCceeccccc
Q 012219 260 LRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRTLLAGTY 339 (468)
Q Consensus 260 l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~ 339 (468)
+.... .+++..+..++.|++.||.||| +.+++||||||+||+++.++.++++|||.+...... .....++.
T Consensus 76 l~~~~---~l~~~~~~~~~~ql~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~---~~~~~~~~ 146 (237)
T cd05576 76 ISKFL---NIPEECVKRWAAEMVVALDALH---REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS---CDGEAVEN 146 (237)
T ss_pred HHHhc---CCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHEEEcCCCCEEEecccchhccccc---cccCCcCc
Confidence 87543 3889999999999999999999 789999999999999999999999999988665422 12234567
Q ss_pred cccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHH
Q 012219 340 GYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAF 419 (468)
Q Consensus 340 ~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~ 419 (468)
.|+|||......++.++||||+|+++|||++|+.|+....... .......++.... ..+.+++.
T Consensus 147 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~---------~~~~~~~~~~~~~-------~~~~~li~ 210 (237)
T cd05576 147 MYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI---------NTHTTLNIPEWVS-------EEARSLLQ 210 (237)
T ss_pred cccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc---------ccccccCCcccCC-------HHHHHHHH
Confidence 8999999988889999999999999999999998865322110 0000011111111 12667899
Q ss_pred hcccCCCCCCCCH
Q 012219 420 SCLRSQPKSRPTM 432 (468)
Q Consensus 420 ~cl~~dP~~RPs~ 432 (468)
+|++.||++||++
T Consensus 211 ~~l~~dp~~R~~~ 223 (237)
T cd05576 211 QLLQFNPTERLGA 223 (237)
T ss_pred HHccCCHHHhcCC
Confidence 9999999999997
No 376
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.1e-35 Score=282.94 Aligned_cols=243 Identities=23% Similarity=0.337 Sum_probs=192.7
Q ss_pred HhhCccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEEE
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCMF 245 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 245 (468)
.++.|.+...+|.|+|+.|-.+. ..+++..+||++...... -.+|+.++... +||||+++.+.+.+....+
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~-------~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~ 392 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADD-------NQDEIPISLLVRDHPNIVKSHDVYEDGKEIY 392 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccccc-------cccccchhhhhcCCCcceeecceecCCceee
Confidence 36788888999999999998885 567888999999876222 22567666555 7999999999999999999
Q ss_pred EEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee-CCCCCeEEeecccccc
Q 012219 246 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLL-NSELEAFVADFGVARL 324 (468)
Q Consensus 246 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll-~~~~~~kl~Dfg~~~~ 324 (468)
+|||.+.++-+.+.+...+. .. .++..|+.+|+.|+.||| .+|++||||||+|||+ ++.++++|+|||.++.
T Consensus 393 ~v~e~l~g~ell~ri~~~~~---~~-~e~~~w~~~lv~Av~~LH---~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~ 465 (612)
T KOG0603|consen 393 LVMELLDGGELLRRIRSKPE---FC-SEASQWAAELVSAVDYLH---EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSE 465 (612)
T ss_pred eeehhccccHHHHHHHhcch---hH-HHHHHHHHHHHHHHHHHH---hcCeeecCCChhheeecCCCCcEEEEEechhhh
Confidence 99999999998888876543 22 677789999999999999 7899999999999999 5889999999999987
Q ss_pred ccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccc
Q 012219 325 LNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVD 404 (468)
Q Consensus 325 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (468)
.... ....+-|..|.|||++....|++++|+||||++||+|++|+.||..-+.... +...+ ..+.++
T Consensus 466 ~~~~---~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~e-------i~~~i---~~~~~s 532 (612)
T KOG0603|consen 466 LERS---CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIE-------IHTRI---QMPKFS 532 (612)
T ss_pred Cchh---hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHH-------HHHhh---cCCccc
Confidence 6543 2334568899999999999999999999999999999999999975544311 11111 111111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHH-HHHH
Q 012219 405 QKIRQDIILVSTVAFSCLRSQPKSRPTMQLVS-NEFI 440 (468)
Q Consensus 405 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~-~~l~ 440 (468)
..+++. -.+++..||+.||.+||+|.++. +.|.
T Consensus 533 ~~vS~~---AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 533 ECVSDE---AKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred cccCHH---HHHHHHHhccCChhhCcChhhhccCcch
Confidence 222222 44688899999999999999887 4454
No 377
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-34 Score=237.95 Aligned_cols=260 Identities=23% Similarity=0.286 Sum_probs=195.3
Q ss_pred ccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEe
Q 012219 172 FHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEY 250 (468)
Q Consensus 172 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (468)
|...++||+|.||+||+|+. .+++.||+|.+..+...+. ......+|+-+++.++|.|||++++....++..-+|+||
T Consensus 4 ydkmekigegtygtvfkarn~~t~eivalkrvrlddddeg-vpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 4 YDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEG-VPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred hHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCC-CcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 44557799999999999974 5688999999987665443 234567999999999999999999999999999999999
Q ss_pred ccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCC
Q 012219 251 MEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSS 330 (468)
Q Consensus 251 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 330 (468)
|. .+|..+...-.. .++.....+++.|+.+||.|+| ++.+.||||||+|.+++.+|+.|++|||+++.++-+-.
T Consensus 83 cd-qdlkkyfdslng--~~d~~~~rsfmlqllrgl~fch---shnvlhrdlkpqnllin~ngelkladfglarafgipvr 156 (292)
T KOG0662|consen 83 CD-QDLKKYFDSLNG--DLDPEIVRSFMLQLLRGLGFCH---SHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR 156 (292)
T ss_pred hh-HHHHHHHHhcCC--cCCHHHHHHHHHHHHhhhhhhh---hhhhhhccCCcceEEeccCCcEEecccchhhhcCCceE
Confidence 96 478777765433 3888889999999999999999 78999999999999999999999999999998876555
Q ss_pred CceeccccccccccccccCC-CCCccchhhHHHHHHHHHHh-CCCCCCcccccchh-----------hhcccccccccCC
Q 012219 331 NRTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWS-----------LDKNIKLIDLLDP 397 (468)
Q Consensus 331 ~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~-----------~~~~~~~~~~~~~ 397 (468)
..+..+-|..|.+|.++.+. -|++..|+||.|||+.|+.. |++.|...+-.... .+++-.+....|-
T Consensus 157 cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdy 236 (292)
T KOG0662|consen 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDY 236 (292)
T ss_pred eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCC
Confidence 55556789999999998876 58889999999999999997 77666533211100 0011111111221
Q ss_pred CCCCccc--hhHHHH----HHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 398 RLSPPVD--QKIRQD----IILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 398 ~~~~~~~--~~~~~~----~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
..-+.+. ..+.+. ...=.++..+.+.-+|.+|.++++.+++
T Consensus 237 k~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 237 KPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred cccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 1111111 111111 1223467777888899999999887653
No 378
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-36 Score=262.44 Aligned_cols=253 Identities=25% Similarity=0.319 Sum_probs=189.3
Q ss_pred ccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhh-ccCCceeeEEEEEeeCCEEEEEEEec
Q 012219 174 IKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQ-IRHRNIVKLYGFCLHRKCMFLIYEYM 251 (468)
Q Consensus 174 ~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~~~~~~lv~e~~ 251 (468)
....||.|+||+|+|..+ +.|+..|||++...... ...+++..|.+...+ =+.||||+++|.+..++..++.||.|
T Consensus 68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~--keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM 145 (361)
T KOG1006|consen 68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIE--KEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM 145 (361)
T ss_pred HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccch--HHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH
Confidence 345699999999999965 57999999999876653 345778888876554 47999999999999999999999999
Q ss_pred cCCChhhhhhc--CcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 252 EMGSLFCVLRT--DEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 252 ~~gsL~~~l~~--~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
. -|+..+... .-....+++.-.-.|......||.||-. ...|+|||+||+|||++..|.+||+|||.+-.+. ++
T Consensus 146 d-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~--~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv-~S 221 (361)
T KOG1006|consen 146 D-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE--ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLV-DS 221 (361)
T ss_pred h-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH--HhhhhhccCChhheEEecCCCEeeecccchHhHH-HH
Confidence 6 476654432 1122347777777888889999999986 5689999999999999999999999999987653 33
Q ss_pred CCceeccccccccccccccCC--CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCC-CCCCccchh
Q 012219 330 SNRTLLAGTYGYIAPELAYTM--VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDP-RLSPPVDQK 406 (468)
Q Consensus 330 ~~~~~~~g~~~y~aPE~~~~~--~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 406 (468)
...+...|-..|||||.+... .|+-+|||||+|+.|||+.||+.||..-.+.-..... .-.-|| .+..+. .
T Consensus 222 iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~----Vv~gdpp~l~~~~-~- 295 (361)
T KOG1006|consen 222 IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQ----VVIGDPPILLFDK-E- 295 (361)
T ss_pred HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHH----HHcCCCCeecCcc-c-
Confidence 344556788899999988643 5899999999999999999999998754331111110 001111 111111 1
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 407 IRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 407 ~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.......+..++..|+.+|-..||...++.++
T Consensus 296 ~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 296 CVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred ccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 01122337788999999999999999998854
No 379
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-34 Score=268.53 Aligned_cols=256 Identities=27% Similarity=0.429 Sum_probs=196.8
Q ss_pred hCccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcch--hh--hhhHHHHHHHHHHHhhccCCceeeEEEEEe-eCCE
Q 012219 170 EDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSET--EE--LASLESFGNEARLLSQIRHRNIVKLYGFCL-HRKC 243 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~ 243 (468)
++|-+..+||+|+|+.||++. +.+.+.||||+-...+. .+ ....+...+|.++-+.|.||.||++|+|+. +.+.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds 542 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS 542 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence 457777899999999999994 66788999997654322 11 123456678999999999999999999986 4567
Q ss_pred EEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC---CCCeEEeecc
Q 012219 244 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS---ELEAFVADFG 320 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~---~~~~kl~Dfg 320 (468)
+|-|.|||+|.+|.-+|..++. +++.++..|+.||..||.||... +++|||-||||.|||+-+ -|.+||+|||
T Consensus 543 FCTVLEYceGNDLDFYLKQhkl---mSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFG 618 (775)
T KOG1151|consen 543 FCTVLEYCEGNDLDFYLKQHKL---MSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFG 618 (775)
T ss_pred ceeeeeecCCCchhHHHHhhhh---hhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecc
Confidence 8999999999999999987654 89999999999999999999966 789999999999999954 3789999999
Q ss_pred ccccccCCCCC-------ceeccccccccccccccC----CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccc
Q 012219 321 VARLLNFDSSN-------RTLLAGTYGYIAPELAYT----MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNI 389 (468)
Q Consensus 321 ~~~~~~~~~~~-------~~~~~g~~~y~aPE~~~~----~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~ 389 (468)
+++.+..+... .+...||.+|++||.+.- ..++.|+||||.|||+|+.+.|+.||.........+...
T Consensus 619 LSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeN- 697 (775)
T KOG1151|consen 619 LSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQEN- 697 (775)
T ss_pred hhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhh-
Confidence 99998765443 233579999999998753 368899999999999999999999998655433322221
Q ss_pred ccccccCCCC--CCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 390 KLIDLLDPRL--SPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 390 ~~~~~~~~~~--~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
.+.....-.+ .+.... + ...+|.+||...-++|.+..++..
T Consensus 698 TIlkAtEVqFP~KPvVss---e----AkaFIRRCLaYRKeDR~DV~qLA~ 740 (775)
T KOG1151|consen 698 TILKATEVQFPPKPVVSS---E----AKAFIRRCLAYRKEDRIDVQQLAC 740 (775)
T ss_pred chhcceeccCCCCCccCH---H----HHHHHHHHHHhhhhhhhhHHHHcc
Confidence 1111111111 111111 1 345888999999999998877763
No 380
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.8e-36 Score=258.83 Aligned_cols=265 Identities=25% Similarity=0.361 Sum_probs=193.2
Q ss_pred CccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEee--------C
Q 012219 171 DFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLH--------R 241 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--------~ 241 (468)
.|.-..+||+|.||.||+|+. ++|+.||+|+..-+...+.-. ....+|++++..++|+|++.+++.|.. .
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfp-italreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFP-ITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCc-HHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 455567899999999999975 467888998765433222222 234589999999999999999998864 3
Q ss_pred CEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccc
Q 012219 242 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGV 321 (468)
Q Consensus 242 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 321 (468)
.+.++|+++|+. +|...+.... ..++..++.+++.++..||.|+| ...|+|||+||.|+|++.++.+||+|||+
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn~~--vr~sls~Ikk~Mk~Lm~GL~~iH---r~kilHRDmKaaNvLIt~dgilklADFGl 170 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSNRK--VRFSLSEIKKVMKGLMNGLYYIH---RNKILHRDMKAANVLITKDGILKLADFGL 170 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcCcc--ccccHHHHHHHHHHHHHHHHHHH---HhhHHhhcccHhhEEEcCCceEEeecccc
Confidence 458999999985 8888886543 34888999999999999999999 77999999999999999999999999999
Q ss_pred cccccCCCC----CceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCccccc---------------
Q 012219 322 ARLLNFDSS----NRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSS--------------- 381 (468)
Q Consensus 322 ~~~~~~~~~----~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~--------------- 381 (468)
++.+..... ..+..+-|..|++||.+.+ ..|+++.|||..|||+.||+||.+-++.....
T Consensus 171 ar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tk 250 (376)
T KOG0669|consen 171 ARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITK 250 (376)
T ss_pred ccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCc
Confidence 987643222 2333456899999998775 57999999999999999999999887643321
Q ss_pred -chhhhcccccccccCCC-CCCccchhHHHHHH------HHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 382 -SWSLDKNIKLIDLLDPR-LSPPVDQKIRQDII------LVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 382 -~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~------~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
.|.......+.+.+... +.......+.+.+. .-.+++.+++..||.+||++++++++-.-.
T Consensus 251 evWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~ 319 (376)
T KOG0669|consen 251 EVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFW 319 (376)
T ss_pred ccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhh
Confidence 22211111111111100 11111111112221 356788899999999999999999665443
No 381
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-34 Score=295.66 Aligned_cols=259 Identities=26% Similarity=0.340 Sum_probs=204.3
Q ss_pred HHHHHhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC
Q 012219 164 DMIEATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK 242 (468)
Q Consensus 164 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 242 (468)
++.-..++|.+.+.||+|+||.|..++. .+++.+|+|++.+...-.......|..|-++|..-+.+-|+.+.-.|.+.+
T Consensus 69 ~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~ 148 (1317)
T KOG0612|consen 69 ELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDER 148 (1317)
T ss_pred HHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCcc
Confidence 3444467899999999999999999986 468899999998866555556678999999999999999999999999999
Q ss_pred EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccc
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVA 322 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~ 322 (468)
.+|+|||||+||+|..++.... .+++..+.-++..|.-||.-+| +.|+|||||||.|||+|..|++||+|||.|
T Consensus 149 ~LYlVMdY~pGGDlltLlSk~~---~~pE~~ArFY~aEiVlAldslH---~mgyVHRDiKPDNvLld~~GHikLADFGsC 222 (1317)
T KOG0612|consen 149 YLYLVMDYMPGGDLLTLLSKFD---RLPEDWARFYTAEIVLALDSLH---SMGYVHRDIKPDNVLLDKSGHIKLADFGSC 222 (1317)
T ss_pred ceEEEEecccCchHHHHHhhcC---CChHHHHHHHHHHHHHHHHHHH---hccceeccCCcceeEecccCcEeeccchhH
Confidence 9999999999999999998765 3777777888899999999999 899999999999999999999999999999
Q ss_pred ccccCCCCCc-eeccccccccccccccC-----CCCCccchhhHHHHHHHHHHhCCCCCCcccccchh--hhcccccccc
Q 012219 323 RLLNFDSSNR-TLLAGTYGYIAPELAYT-----MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWS--LDKNIKLIDL 394 (468)
Q Consensus 323 ~~~~~~~~~~-~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~--~~~~~~~~~~ 394 (468)
-.+..++... ...+|||-|.+||++.. +.|++.+|.||+||++|||+.|..||.......-. .........+
T Consensus 223 lkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~F 302 (1317)
T KOG0612|consen 223 LKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSF 302 (1317)
T ss_pred HhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCC
Confidence 8887655544 44689999999999863 56899999999999999999999999743321110 0111111111
Q ss_pred cCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCC---HHHHHHHH
Q 012219 395 LDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPT---MQLVSNEF 439 (468)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs---~~~v~~~l 439 (468)
.+ . ..++++ ..+||.+.+ -+|+.|.. ++++..+-
T Consensus 303 P~-----~--~~VSee---akdLI~~ll-~~~e~RLgrngiedik~Hp 339 (1317)
T KOG0612|consen 303 PD-----E--TDVSEE---AKDLIEALL-CDREVRLGRNGIEDIKNHP 339 (1317)
T ss_pred Cc-----c--cccCHH---HHHHHHHHh-cChhhhcccccHHHHHhCc
Confidence 10 0 112222 334555544 47888888 89988654
No 382
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=274.14 Aligned_cols=245 Identities=24% Similarity=0.345 Sum_probs=191.7
Q ss_pred cceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEeccC
Q 012219 175 KYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYMEM 253 (468)
Q Consensus 175 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 253 (468)
.+.||+|.||+||-|.. ++|+.||||++.+....... ..++++|+.+|+.++||.||.+--.|+..+..++|||-+.|
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kq-esqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQ-ESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHG 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCch-HHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcc
Confidence 47899999999999964 58999999999877665433 36789999999999999999999999999999999999965
Q ss_pred CChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC---CCeEEeeccccccccCCCC
Q 012219 254 GSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSE---LEAFVADFGVARLLNFDSS 330 (468)
Q Consensus 254 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~---~~~kl~Dfg~~~~~~~~~~ 330 (468)
+..+++-.... ..+++....-++.||+.||.||| -.+|+|+||||+|||+.+. -++||+|||+|++++ +..
T Consensus 648 -DMLEMILSsEk-gRL~er~TkFlvtQIL~ALr~LH---~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIg-Eks 721 (888)
T KOG4236|consen 648 -DMLEMILSSEK-GRLPERITKFLVTQILVALRYLH---FKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIG-EKS 721 (888)
T ss_pred -hHHHHHHHhhc-ccchHHHHHHHHHHHHHHHHHhh---hcceeeccCCchheeeccCCCCCceeeccccceeecc-hhh
Confidence 55555544333 23788777888999999999999 7899999999999999654 468999999999986 445
Q ss_pred CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHH
Q 012219 331 NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQD 410 (468)
Q Consensus 331 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (468)
.....+||+.|+|||++....|...-|+||.|||+|--++|..||......... .+...++ +++..+..+...
T Consensus 722 FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQ----IQNAaFM---yPp~PW~eis~~ 794 (888)
T KOG4236|consen 722 FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQ----IQNAAFM---YPPNPWSEISPE 794 (888)
T ss_pred hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHH----hhccccc---cCCCchhhcCHH
Confidence 566778999999999999999999999999999999999999999743321111 1112222 222222222222
Q ss_pred HHHHHHHHHhcccCCCCCCCCHHHHH
Q 012219 411 IILVSTVAFSCLRSQPKSRPTMQLVS 436 (468)
Q Consensus 411 ~~~l~~l~~~cl~~dP~~RPs~~~v~ 436 (468)
-.++|...++..=.+|-|.++-+
T Consensus 795 ---AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 795 ---AIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred ---HHHHHHHHHHHHHHHhcchHhhc
Confidence 44677778888878888765543
No 383
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-34 Score=263.89 Aligned_cols=260 Identities=21% Similarity=0.291 Sum_probs=197.0
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccC--C----ceeeEEEEEeeC
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRH--R----NIVKLYGFCLHR 241 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~----niv~l~~~~~~~ 241 (468)
+++|.+...+|+|.||.|..+.. ..+..||||+++.-... .++.+-|+++++++.+ | -+|.+.+|+...
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kY----reAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyr 163 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKY----REAALIEIEVLQKINESDPNGKFRCVQMRDWFDYR 163 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHH----hhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhcc
Confidence 67899999999999999999964 34789999999865543 3456679999999942 2 277788899999
Q ss_pred CEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC-----------
Q 012219 242 KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS----------- 310 (468)
Q Consensus 242 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~----------- 310 (468)
++.|+|+|.+ |-|+.+++..+.. .+++...+..++.|++++++||| +.+++|-||||+|||+.+
T Consensus 164 ghiCivfell-G~S~~dFlk~N~y-~~fpi~~ir~m~~QL~~sv~fLh---~~kl~HTDLKPENILfvss~~~~~~~~k~ 238 (415)
T KOG0671|consen 164 GHICIVFELL-GLSTFDFLKENNY-IPFPIDHIRHMGYQLLESVAFLH---DLKLTHTDLKPENILFVSSEYFKTYNPKK 238 (415)
T ss_pred CceEEEEecc-ChhHHHHhccCCc-cccchHHHHHHHHHHHHHHHHHH---hcceeecCCChheEEEeccceEEEeccCC
Confidence 9999999998 5699999987543 45889999999999999999999 889999999999999831
Q ss_pred ---------CCCeEEeeccccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCccccc
Q 012219 311 ---------ELEAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSS 381 (468)
Q Consensus 311 ---------~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~ 381 (468)
+..++|.|||.|..-. ...+..+.|..|.|||++.+..++.++||||+||||.|+.||...|+.-...
T Consensus 239 ~~~~~r~~ks~~I~vIDFGsAtf~~---e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~ 315 (415)
T KOG0671|consen 239 KVCFIRPLKSTAIKVIDFGSATFDH---EHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENL 315 (415)
T ss_pred ccceeccCCCcceEEEecCCcceec---cCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcH
Confidence 3457899999998743 3446678899999999999999999999999999999999999887643211
Q ss_pred chhhhcccccc-------------------cccC---CCC----------CCc---cchhHHHHHHHHHHHHHhcccCCC
Q 012219 382 SWSLDKNIKLI-------------------DLLD---PRL----------SPP---VDQKIRQDIILVSTVAFSCLRSQP 426 (468)
Q Consensus 382 ~~~~~~~~~~~-------------------~~~~---~~~----------~~~---~~~~~~~~~~~l~~l~~~cl~~dP 426 (468)
. ...-.+.+. .-+| ... ..+ .......+...|.+|+.+|+..||
T Consensus 316 E-HLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP 394 (415)
T KOG0671|consen 316 E-HLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDP 394 (415)
T ss_pred H-HHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCc
Confidence 0 000000000 0011 000 000 000112344569999999999999
Q ss_pred CCCCCHHHHH-HHHHh
Q 012219 427 KSRPTMQLVS-NEFIA 441 (468)
Q Consensus 427 ~~RPs~~~v~-~~l~~ 441 (468)
.+|+|+.|++ +.|++
T Consensus 395 ~~RiTl~EAL~HpFF~ 410 (415)
T KOG0671|consen 395 ARRITLREALSHPFFA 410 (415)
T ss_pred cccccHHHHhcCHHhh
Confidence 9999998887 44444
No 384
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00 E-value=1.1e-32 Score=254.65 Aligned_cols=239 Identities=30% Similarity=0.429 Sum_probs=190.1
Q ss_pred CCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEeccCCChhhhh
Q 012219 182 GYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYMEMGSLFCVL 260 (468)
Q Consensus 182 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l 260 (468)
+||.||+|... +++.+++|++........ .+.+.+|++.+++++|+|++++++++......++++||+++++|.+++
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~ 78 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK--RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLL 78 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH--HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHH
Confidence 58999999875 589999999986554321 578899999999999999999999999999999999999999999998
Q ss_pred hcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCceecccccc
Q 012219 261 RTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRTLLAGTYG 340 (468)
Q Consensus 261 ~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~ 340 (468)
..... +++..++.++.+++.++.+|| ..+++|+||+|+||+++.++.++++|||.+....... ......++..
T Consensus 79 ~~~~~---~~~~~~~~~~~~l~~~l~~lh---~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~ 151 (244)
T smart00220 79 KKRGR---LSEDEARFYARQILSALEYLH---SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-LLTTFVGTPE 151 (244)
T ss_pred HhccC---CCHHHHHHHHHHHHHHHHHHH---HcCeecCCcCHHHeEECCCCcEEEccccceeeecccc-ccccccCCcC
Confidence 76443 788999999999999999999 7799999999999999999999999999998765332 2334567889
Q ss_pred ccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHh
Q 012219 341 YIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFS 420 (468)
Q Consensus 341 y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ 420 (468)
|+|||......++.++||||||++++++++|..||.............. . ........ .. .....+.+++.+
T Consensus 152 ~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~---~-~~~~~~~~-~~---~~~~~~~~~i~~ 223 (244)
T smart00220 152 YMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIG---K-PKPPFPPP-EW---KISPEAKDLIRK 223 (244)
T ss_pred CCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHh---c-cCCCCccc-cc---cCCHHHHHHHHH
Confidence 9999999888899999999999999999999999875322111111000 0 00000000 00 011237789999
Q ss_pred cccCCCCCCCCHHHHHH
Q 012219 421 CLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 421 cl~~dP~~RPs~~~v~~ 437 (468)
|+..+|++||++.++++
T Consensus 224 ~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 224 LLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HccCCchhccCHHHHhh
Confidence 99999999999999986
No 385
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-34 Score=285.40 Aligned_cols=246 Identities=26% Similarity=0.341 Sum_probs=187.1
Q ss_pred ccccceeeeeCCce-EEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEEEEEEE
Q 012219 172 FHIKYCIGTGGYGS-VYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 172 ~~~~~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 249 (468)
|.-.+.+|.|+.|+ ||+|.. +|+.||||++..... ....+|+..++.- +|||||++++.-.++...||..|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~~------~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalE 583 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEEFF------DFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALE 583 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhHhH------HHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEeh
Confidence 44456789998875 599988 688999999975543 2345899998877 69999999999999999999999
Q ss_pred eccCCChhhhhhcCcccC-CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC---C--CCeEEeeccccc
Q 012219 250 YMEMGSLFCVLRTDEEAV-GLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS---E--LEAFVADFGVAR 323 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~-~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~---~--~~~kl~Dfg~~~ 323 (468)
.|. .+|.+++....... .......+.+..|++.||++|| +.+||||||||+|||++. + ..++|+|||+++
T Consensus 584 LC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLH---sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsK 659 (903)
T KOG1027|consen 584 LCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLH---SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSK 659 (903)
T ss_pred Hhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHH---hcccccccCCCceEEEEccCCCcceeEEeccccccc
Confidence 996 59999998741111 1122456788999999999999 789999999999999976 3 578999999999
Q ss_pred cccCCCCC---ceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccccccccCCCC
Q 012219 324 LLNFDSSN---RTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLLDPRL 399 (468)
Q Consensus 324 ~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (468)
.+...... .....||-+|+|||++....-+.++||||+||++|..++ |++||.+.-............... +
T Consensus 660 kl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~~L~~----L 735 (903)
T KOG1027|consen 660 KLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNYTLVH----L 735 (903)
T ss_pred ccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCccceee----e
Confidence 98754433 234679999999999999888889999999999999999 599998543221111111110100 1
Q ss_pred CCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 400 SPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 400 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
.+.. ++ +-.++|.+|++.||..||++.+|+++-
T Consensus 736 ~~~~-----d~--eA~dLI~~ml~~dP~~RPsa~~VL~HP 768 (903)
T KOG1027|consen 736 EPLP-----DC--EAKDLISRMLNPDPQLRPSATDVLNHP 768 (903)
T ss_pred ccCc-----hH--HHHHHHHHhcCCCcccCCCHHHHhCCC
Confidence 1110 01 245789999999999999999998653
No 386
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00 E-value=4.7e-33 Score=285.08 Aligned_cols=261 Identities=20% Similarity=0.249 Sum_probs=167.2
Q ss_pred HhhCccccceeeeeCCceEEEEEcC-C----CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEE-----
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARLP-S----GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGF----- 237 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~----- 237 (468)
..++|.+.+.||+|+||.||+|++. + +..||+|++......+ .+..+ .+....+.++..++..
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e-----~~~~e--~l~~~~~~~~~~~~~~~~~~~ 202 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVE-----IWMNE--RVRRACPNSCADFVYGFLEPV 202 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhH-----HHHHH--HHHhhchhhHHHHHHhhhccc
Confidence 4578999999999999999999764 4 6899999886433221 11111 1111122222221111
Q ss_pred -EeeCCEEEEEEEeccCCChhhhhhcCccc-----------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEec
Q 012219 238 -CLHRKCMFLIYEYMEMGSLFCVLRTDEEA-----------------VGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHR 299 (468)
Q Consensus 238 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-----------------~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~ 299 (468)
+......++|+||+.+++|.+++...... .......+..++.|++.||.||| +.+|+||
T Consensus 203 ~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH---~~gIiHR 279 (566)
T PLN03225 203 SSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH---STGIVHR 279 (566)
T ss_pred ccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH---HCCEEeC
Confidence 24566789999999999999988653211 00122345679999999999999 7899999
Q ss_pred CCCCCceeeCC-CCCeEEeeccccccccCC-CCCceeccccccccccccccCC----------------------CCCcc
Q 012219 300 DISSNNVLLNS-ELEAFVADFGVARLLNFD-SSNRTLLAGTYGYIAPELAYTM----------------------VVTEK 355 (468)
Q Consensus 300 dlk~~NIll~~-~~~~kl~Dfg~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~----------------------~~~~~ 355 (468)
||||+|||++. ++.+||+|||+++.+... ........+++.|+|||.+... .++.+
T Consensus 280 DLKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k 359 (566)
T PLN03225 280 DVKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDR 359 (566)
T ss_pred cCCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCC
Confidence 99999999986 579999999999865432 2223445789999999965321 24456
Q ss_pred chhhHHHHHHHHHHhCCCCCCcccccch-hhhcc----cccccccCCCCCCccchhH---HHHHHHHHHHHHhcccCCCC
Q 012219 356 CDVYSFGVVALEVLMGKHPGELLSSSSW-SLDKN----IKLIDLLDPRLSPPVDQKI---RQDIILVSTVAFSCLRSQPK 427 (468)
Q Consensus 356 ~Dv~s~Gvil~el~tg~~p~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~---~~~~~~l~~l~~~cl~~dP~ 427 (468)
+|||||||++|||+++..|++....... ..... ........+.......... ........+++.+|++.||+
T Consensus 360 ~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~ 439 (566)
T PLN03225 360 FDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGR 439 (566)
T ss_pred cccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcc
Confidence 7999999999999998877543110000 00000 0000111111111100000 00001234799999999999
Q ss_pred CCCCHHHHHHH
Q 012219 428 SRPTMQLVSNE 438 (468)
Q Consensus 428 ~RPs~~~v~~~ 438 (468)
+|||+++++++
T Consensus 440 kR~ta~e~L~H 450 (566)
T PLN03225 440 QRISAKAALAH 450 (566)
T ss_pred cCCCHHHHhCC
Confidence 99999999864
No 387
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-34 Score=260.90 Aligned_cols=244 Identities=23% Similarity=0.353 Sum_probs=195.0
Q ss_pred hCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 247 (468)
.+|+....||+|+||.|..+.. .+...+|||+++++..-.....+.-+.|-++|... +-|.++++..+++.-+.++.|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 4799999999999999999954 45678999999876543333344445666777655 578899999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
|||+.||+|--+++.-+. +.+..+.-+|..||-||-+|| ++||+.||||..|||+|.+|.+||+|||+++.--.
T Consensus 429 MEyvnGGDLMyhiQQ~Gk---FKEp~AvFYAaEiaigLFFLh---~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~ 502 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQVGK---FKEPVAVFYAAEIAIGLFFLH---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF 502 (683)
T ss_pred EEEecCchhhhHHHHhcc---cCCchhhhhhHHHHHHhhhhh---cCCeeeeeccccceEeccCCceEeeeccccccccc
Confidence 999999999888876544 777888889999999999999 89999999999999999999999999999987655
Q ss_pred CCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhH
Q 012219 328 DSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKI 407 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (468)
+.......+||+.|+|||++....|+..+|.|||||+||||+.|++||+..+..... ..+.+....- +...
T Consensus 503 ~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF-------~aI~ehnvsy--PKsl 573 (683)
T KOG0696|consen 503 DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELF-------QAIMEHNVSY--PKSL 573 (683)
T ss_pred CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHH-------HHHHHccCcC--cccc
Confidence 666777889999999999999999999999999999999999999999875543221 1112222221 1112
Q ss_pred HHHHHHHHHHHHhcccCCCCCCCC
Q 012219 408 RQDIILVSTVAFSCLRSQPKSRPT 431 (468)
Q Consensus 408 ~~~~~~l~~l~~~cl~~dP~~RPs 431 (468)
+.+ -..+....+.+.|.+|..
T Consensus 574 SkE---Av~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 574 SKE---AVAICKGLLTKHPGKRLG 594 (683)
T ss_pred cHH---HHHHHHHHhhcCCccccC
Confidence 222 345677888999999964
No 388
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00 E-value=2.4e-32 Score=273.11 Aligned_cols=264 Identities=17% Similarity=0.190 Sum_probs=177.5
Q ss_pred hhCccccceeeeeCCceEEEEEc-----------------CCCCEEEEEEecCcchhhh-----------hhHHHHHHHH
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-----------------PSGKVVALKKLHRSETEEL-----------ASLESFGNEA 220 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~-----------~~~~~~~~e~ 220 (468)
.++|.+.++||+|+||.||+|.+ ..++.||||++........ ...+.+..|+
T Consensus 144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~ 223 (507)
T PLN03224 144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA 223 (507)
T ss_pred ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence 56899999999999999999953 2456899999875432210 0112344577
Q ss_pred HHHhhccCCce-----eeEEEEEee--------CCEEEEEEEeccCCChhhhhhcCcc---------------------c
Q 012219 221 RLLSQIRHRNI-----VKLYGFCLH--------RKCMFLIYEYMEMGSLFCVLRTDEE---------------------A 266 (468)
Q Consensus 221 ~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~~---------------------~ 266 (468)
.++.+++|.++ ++++++|.. ....++||||+++|+|.++++.... .
T Consensus 224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~ 303 (507)
T PLN03224 224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ 303 (507)
T ss_pred HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence 77777876654 677787753 3468999999999999999864211 1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCC-ceeccccccccccc
Q 012219 267 VGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSN-RTLLAGTYGYIAPE 345 (468)
Q Consensus 267 ~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~g~~~y~aPE 345 (468)
..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++........ .....+++.|+|||
T Consensus 304 ~~~~~~~~~~i~~ql~~aL~~lH---~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE 380 (507)
T PLN03224 304 DKRDINVIKGVMRQVLTGLRKLH---RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPE 380 (507)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChh
Confidence 13467788899999999999999 779999999999999999999999999999765432211 11223478999999
Q ss_pred cccCCC--------------------C--CccchhhHHHHHHHHHHhCCC-CCCcccccchhhhccccc----ccccCCC
Q 012219 346 LAYTMV--------------------V--TEKCDVYSFGVVALEVLMGKH-PGELLSSSSWSLDKNIKL----IDLLDPR 398 (468)
Q Consensus 346 ~~~~~~--------------------~--~~~~Dv~s~Gvil~el~tg~~-p~~~~~~~~~~~~~~~~~----~~~~~~~ 398 (468)
.+.... + ..+.||||+||+++||++|.. |+................ .......
T Consensus 381 ~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~ 460 (507)
T PLN03224 381 ELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQK 460 (507)
T ss_pred hhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccC
Confidence 875332 1 124799999999999999886 664322111110000000 0000000
Q ss_pred CCCccchhHHHHHHHHHHHHHhcccCCC---CCCCCHHHHHHH
Q 012219 399 LSPPVDQKIRQDIILVSTVAFSCLRSQP---KSRPTMQLVSNE 438 (468)
Q Consensus 399 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP---~~RPs~~~v~~~ 438 (468)
....... ..-....+++.+|+..+| .+|+|++|++++
T Consensus 461 ~~~~~~d---~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 461 YDFSLLD---RNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred CCccccc---ccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 0000000 011125568888998766 689999999854
No 389
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-34 Score=270.22 Aligned_cols=252 Identities=23% Similarity=0.330 Sum_probs=202.6
Q ss_pred hCccccceeeeeCCceEEEEEcCCCC-EEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPSGK-VVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~~~-~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
.++.....||-|+||.|=.+..+..+ .+|+|.+++....+..+.+....|-.+|...+.|.||++|-.+.+....|+.|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 45566678999999999999875544 38999888766655566677889999999999999999999999999999999
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
|-|-||.+...++..+. ++.....-++..+.+|++||| +++||.|||||+|.+++.+|-+||.|||+|+.+...
T Consensus 500 EaClGGElWTiLrdRg~---Fdd~tarF~~acv~EAfeYLH---~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g 573 (732)
T KOG0614|consen 500 EACLGGELWTILRDRGS---FDDYTARFYVACVLEAFEYLH---RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG 573 (732)
T ss_pred HhhcCchhhhhhhhcCC---cccchhhhhHHHHHHHHHHHH---hcCceeccCChhheeeccCCceEEeehhhHHHhccC
Confidence 99999999999987554 788888889999999999999 889999999999999999999999999999998744
Q ss_pred CCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 329 SSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 329 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
.....++||+.|.|||++.+...+.++|.||+|+++|||+||++||...+..... ..+..-+|..- .+..+.
T Consensus 574 -~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktY----n~ILkGid~i~---~Pr~I~ 645 (732)
T KOG0614|consen 574 -RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTY----NLILKGIDKIE---FPRRIT 645 (732)
T ss_pred -CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHH----HHHHhhhhhhh---cccccc
Confidence 3445579999999999999999999999999999999999999999865432111 11111111100 011111
Q ss_pred HHHHHHHHHHHhcccCCCCCCCC-----HHHHHHH
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPT-----MQLVSNE 438 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs-----~~~v~~~ 438 (468)
. .-.+++.+.+..+|.+|.. +.++.++
T Consensus 646 k---~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH 677 (732)
T KOG0614|consen 646 K---TATDLIKKLCRDNPTERLGYQKGGINDIKKH 677 (732)
T ss_pred h---hHHHHHHHHHhcCcHhhhccccCChHHHHhh
Confidence 1 1446788889999999986 5666643
No 390
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-33 Score=249.31 Aligned_cols=252 Identities=23% Similarity=0.375 Sum_probs=201.7
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 246 (468)
.++|.+...||+|+|.+|..+++ ++.+.+|+|++++.-..+.+.++..+.|-.+..+- +||.+|-+..++..+..++.
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 46799999999999999999976 46788999999887666656666667787777776 79999999999999999999
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccccc
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLN 326 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 326 (468)
|.||++||+|--+++.+.+ +++..+.-+...|+-||.||| ++||+.||||..|||+|..|.+|++|+|.++.--
T Consensus 329 vieyv~ggdlmfhmqrqrk---lpeeharfys~ei~lal~flh---~rgiiyrdlkldnvlldaeghikltdygmcke~l 402 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQRK---LPEEHARFYSAEICLALNFLH---ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGL 402 (593)
T ss_pred EEEEecCcceeeehhhhhc---CcHHHhhhhhHHHHHHHHHHh---hcCeeeeeccccceEEccCCceeecccchhhcCC
Confidence 9999999999777765443 888888888999999999999 8999999999999999999999999999998765
Q ss_pred CCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccc-cCCCCCCccch
Q 012219 327 FDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDL-LDPRLSPPVDQ 405 (468)
Q Consensus 327 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 405 (468)
.+....+.++||+.|.|||.+.+..|...+|.|++||+++||+.|+.||+.............-+.++ +...+..+-+-
T Consensus 403 ~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprsl 482 (593)
T KOG0695|consen 403 GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSL 482 (593)
T ss_pred CCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccccccee
Confidence 66677778999999999999999999999999999999999999999998654332211111111111 12222211111
Q ss_pred hHHHHHHHHHHHHHhcccCCCCCCCC
Q 012219 406 KIRQDIILVSTVAFSCLRSQPKSRPT 431 (468)
Q Consensus 406 ~~~~~~~~l~~l~~~cl~~dP~~RPs 431 (468)
. .....+...-+++||.+|..
T Consensus 483 s-----vkas~vlkgflnkdp~erlg 503 (593)
T KOG0695|consen 483 S-----VKASHVLKGFLNKDPKERLG 503 (593)
T ss_pred e-----hhhHHHHHHhhcCCcHHhcC
Confidence 1 11334667889999999853
No 391
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=2.9e-32 Score=229.36 Aligned_cols=206 Identities=25% Similarity=0.380 Sum_probs=167.1
Q ss_pred HHhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEE
Q 012219 167 EATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCM 244 (468)
Q Consensus 167 ~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 244 (468)
...++..-...||+|++|.|-+.++ .+|+..|+|.+...-.. ...+...+|+.+..+- .+|.+|.++|...+....
T Consensus 43 V~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~--q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdv 120 (282)
T KOG0984|consen 43 VPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNS--QEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDV 120 (282)
T ss_pred cchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcCh--HHHHHHHHhhhhhccCCCCCeEEEeehhhhccccE
Confidence 3345555667799999999988864 68999999999765443 3446677888876554 799999999999999999
Q ss_pred EEEEEeccCCChhhhhhc-CcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccc
Q 012219 245 FLIYEYMEMGSLFCVLRT-DEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVAR 323 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~-~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~ 323 (468)
++.||.|. .||..+.+. -.....+++.-.-+|+..|.+||.|||+ ...++|||+||+|||++.+|++|++|||.+-
T Consensus 121 wIcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~--kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG 197 (282)
T KOG0984|consen 121 WICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS--KLSVIHRDVKPSNILINYDGQVKICDFGISG 197 (282)
T ss_pred EEeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH--HhhhhhccCCcceEEEccCCcEEEcccccce
Confidence 99999996 477766543 1233447888888999999999999996 5689999999999999999999999999987
Q ss_pred cccCCCCCceeccccccccccccccC----CCCCccchhhHHHHHHHHHHhCCCCCCcc
Q 012219 324 LLNFDSSNRTLLAGTYGYIAPELAYT----MVVTEKCDVYSFGVVALEVLMGKHPGELL 378 (468)
Q Consensus 324 ~~~~~~~~~~~~~g~~~y~aPE~~~~----~~~~~~~Dv~s~Gvil~el~tg~~p~~~~ 378 (468)
.+. ++-..+...|-..|||||.+.. ..|+-+|||||+|+.+.||.+++.||+.-
T Consensus 198 ~L~-dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w 255 (282)
T KOG0984|consen 198 YLV-DSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW 255 (282)
T ss_pred eeh-hhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence 664 3333444567788999998753 37899999999999999999999998753
No 392
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1.5e-31 Score=257.74 Aligned_cols=203 Identities=23% Similarity=0.381 Sum_probs=173.8
Q ss_pred CccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
-|...+.||-|+||.|.+++ .++...+|.|.+.+.+.-..........|-+||..-..+-||+||-.|.+.+.+|.|||
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd 709 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 709 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence 46677889999999999996 45567799999988776655666778889999999999999999999999999999999
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS 329 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~ 329 (468)
|++||++-.+|-..+- +.+..+.-++..+..|+++.| +.|+|||||||.|||+|.||.+||+|||+|.-+....
T Consensus 710 YIPGGDmMSLLIrmgI---FeE~LARFYIAEltcAiesVH---kmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTH 783 (1034)
T KOG0608|consen 710 YIPGGDMMSLLIRMGI---FEEDLARFYIAELTCAIESVH---KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 783 (1034)
T ss_pred ccCCccHHHHHHHhcc---CHHHHHHHHHHHHHHHHHHHH---hccceecccCccceEEccCCceeeeeccccccceecc
Confidence 9999999988875442 777777778889999999999 9999999999999999999999999999986542100
Q ss_pred C------------------------------------------CceeccccccccccccccCCCCCccchhhHHHHHHHH
Q 012219 330 S------------------------------------------NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALE 367 (468)
Q Consensus 330 ~------------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~e 367 (468)
. .....+||+.|+|||++....++..+|.||.||||||
T Consensus 784 dskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~e 863 (1034)
T KOG0608|consen 784 DSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYE 863 (1034)
T ss_pred ccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHH
Confidence 0 0012368999999999999999999999999999999
Q ss_pred HHhCCCCCCccc
Q 012219 368 VLMGKHPGELLS 379 (468)
Q Consensus 368 l~tg~~p~~~~~ 379 (468)
|+.|+.||-...
T Consensus 864 m~~g~~pf~~~t 875 (1034)
T KOG0608|consen 864 MLVGQPPFLADT 875 (1034)
T ss_pred HhhCCCCccCCC
Confidence 999999996543
No 393
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97 E-value=5.3e-30 Score=231.12 Aligned_cols=211 Identities=34% Similarity=0.577 Sum_probs=182.8
Q ss_pred eeeeCCceEEEEEcCC-CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEeccCCCh
Q 012219 178 IGTGGYGSVYRARLPS-GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYMEMGSL 256 (468)
Q Consensus 178 lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL 256 (468)
||+|++|.||++...+ ++.+++|++....... ..+.+.+|++.++.++|++++++++++......++++||+.+++|
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~--~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l 78 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS--LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSL 78 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh--HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence 6899999999998754 8999999998765432 346788999999999999999999999998999999999999999
Q ss_pred hhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC-CCCeEEeeccccccccCCCCCceec
Q 012219 257 FCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS-ELEAFVADFGVARLLNFDSSNRTLL 335 (468)
Q Consensus 257 ~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~-~~~~kl~Dfg~~~~~~~~~~~~~~~ 335 (468)
.+++.... ..+++..+..++.++++++.+|| +.+++|+||+|.||+++. ++.++|+|||.+.............
T Consensus 79 ~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh---~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~ 153 (215)
T cd00180 79 KDLLKENE--GKLSEDEILRILLQILEGLEYLH---SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTI 153 (215)
T ss_pred HHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcc
Confidence 99987542 24789999999999999999999 779999999999999999 8999999999998765332223345
Q ss_pred cccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHH
Q 012219 336 AGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILV 414 (468)
Q Consensus 336 ~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 414 (468)
.+...|++||..... ..+.++|+|++|++++++ ..+
T Consensus 154 ~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------------~~~ 190 (215)
T cd00180 154 VGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------------PEL 190 (215)
T ss_pred cCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------------HHH
Confidence 578899999998877 888999999999999999 226
Q ss_pred HHHHHhcccCCCCCCCCHHHHHHH
Q 012219 415 STVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 415 ~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.+++.+|++.+|++||++.++++.
T Consensus 191 ~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 191 KDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HHHHHHHhhCCcccCcCHHHHhhC
Confidence 778999999999999999999864
No 394
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5.2e-30 Score=240.91 Aligned_cols=131 Identities=26% Similarity=0.480 Sum_probs=111.5
Q ss_pred hCccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-----C---CceeeEEEEEee
Q 012219 170 EDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEELASLESFGNEARLLSQIR-----H---RNIVKLYGFCLH 240 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-----h---~niv~l~~~~~~ 240 (468)
.+|.+..+||-|.|++||.+. ..+.+.||+|+.+..... .+....||++|++++ | ..||+++++|..
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhY----tEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkh 153 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHY----TEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKH 153 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHH----HHHHHHHHHHHHHHHhcCCCCCCCceeeeeecccee
Confidence 689999999999999999996 457889999999876544 355668999999984 3 469999999875
Q ss_pred ----CCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee
Q 012219 241 ----RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLL 308 (468)
Q Consensus 241 ----~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll 308 (468)
..+.|||+|++ |.+|..++....- +.++...+.+|+.||+.||.|||..| ||||-||||+|||+
T Consensus 154 sGpNG~HVCMVfEvL-GdnLLklI~~s~Y-rGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 154 SGPNGQHVCMVFEVL-GDNLLKLIKYSNY-RGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred cCCCCcEEEEEehhh-hhHHHHHHHHhCC-CCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 46799999999 6688888876543 45899999999999999999999865 99999999999998
No 395
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=3.1e-31 Score=226.54 Aligned_cols=254 Identities=22% Similarity=0.289 Sum_probs=191.0
Q ss_pred HhhCccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CCceeeEEEEEeeC--CE
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEELASLESFGNEARLLSQIR-HRNIVKLYGFCLHR--KC 243 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~--~~ 243 (468)
..++|++.+++|+|.++.||.|. ..+...++||+++..+. +...+|+.++..++ ||||++++++..++ ..
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkk------kKIkREikIL~nL~gg~NIi~L~DiV~Dp~Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKK------KKIKREIKILQNLRGGPNIIKLLDIVKDPESKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHH------HHHHHHHHHHHhccCCCCeeehhhhhcCccccC
Confidence 35789999999999999999995 56788999999986543 45679999999997 99999999998764 45
Q ss_pred EEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC-CCeEEeecccc
Q 012219 244 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSE-LEAFVADFGVA 322 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~-~~~kl~Dfg~~ 322 (468)
..||+||+.+.+....... ++...+...+.+++.||.|+| +.||+|||+||+|+++|.. ...+|+|+|+|
T Consensus 110 paLiFE~v~n~Dfk~ly~t------l~d~dIryY~~elLkALdyCH---S~GImHRDVKPhNvmIdh~~rkLrlIDWGLA 180 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLYPT------LTDYDIRYYIYELLKALDYCH---SMGIMHRDVKPHNVMIDHELRKLRLIDWGLA 180 (338)
T ss_pred chhHhhhhccccHHHHhhh------hchhhHHHHHHHHHHHHhHHH---hcCcccccCCcceeeechhhceeeeeecchH
Confidence 7899999999887766543 667788889999999999999 8999999999999999976 56899999999
Q ss_pred ccccCCCCCceeccccccccccccccC-CCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcc-------------
Q 012219 323 RLLNFDSSNRTLLAGTYGYIAPELAYT-MVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKN------------- 388 (468)
Q Consensus 323 ~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~------------- 388 (468)
.++.+. ......+.+..|.-||++.. ..|+..-|+|||||++..|+..+.||-...+........
T Consensus 181 EFYHp~-~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl 259 (338)
T KOG0668|consen 181 EFYHPG-KEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYL 259 (338)
T ss_pred hhcCCC-ceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHH
Confidence 988643 33444566778999998865 468888999999999999999999985433221110000
Q ss_pred cccccccCCCCCC--------ccchhHH---HH--HHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 389 IKLIDLLDPRLSP--------PVDQKIR---QD--IILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 389 ~~~~~~~~~~~~~--------~~~~~~~---~~--~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
.+-.-.+||.+.. .....+. +. ..+..+++.+.+..|..+|||++|.+.
T Consensus 260 ~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 260 NKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 0000002222211 0000000 00 123667888999999999999988874
No 396
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-30 Score=249.30 Aligned_cols=203 Identities=24% Similarity=0.331 Sum_probs=172.2
Q ss_pred HHhhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHH-----HHHHHHHHHhhcc---CCceeeEEEE
Q 012219 167 EATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLE-----SFGNEARLLSQIR---HRNIVKLYGF 237 (468)
Q Consensus 167 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~-----~~~~e~~~l~~l~---h~niv~l~~~ 237 (468)
+...+|...+.+|+|+||.|+.+.++ +...|+||.+.+.+.-...+.+ ..-.|+++|..++ |+||++++++
T Consensus 558 ~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdf 637 (772)
T KOG1152|consen 558 KKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDF 637 (772)
T ss_pred cccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhe
Confidence 44567899999999999999999764 4667899988766543222222 2446999999997 9999999999
Q ss_pred EeeCCEEEEEEEec-cCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEE
Q 012219 238 CLHRKCMFLIYEYM-EMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFV 316 (468)
Q Consensus 238 ~~~~~~~~lv~e~~-~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl 316 (468)
+++++.++|+||-. ++-+|++++..... +++.++..|+.||+.|+++|| +.+|||||||-+||.++.+|-+||
T Consensus 638 FEddd~yyl~te~hg~gIDLFd~IE~kp~---m~E~eAk~IFkQV~agi~hlh---~~~ivhrdikdenvivd~~g~~kl 711 (772)
T KOG1152|consen 638 FEDDDYYYLETEVHGEGIDLFDFIEFKPR---MDEPEAKLIFKQVVAGIKHLH---DQGIVHRDIKDENVIVDSNGFVKL 711 (772)
T ss_pred eecCCeeEEEecCCCCCcchhhhhhccCc---cchHHHHHHHHHHHhcccccc---ccCceecccccccEEEecCCeEEE
Confidence 99999999999976 56689999987554 889999999999999999999 889999999999999999999999
Q ss_pred eeccccccccCCCCCceeccccccccccccccCCCC-CccchhhHHHHHHHHHHhCCCCCCc
Q 012219 317 ADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVV-TEKCDVYSFGVVALEVLMGKHPGEL 377 (468)
Q Consensus 317 ~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~Gvil~el~tg~~p~~~ 377 (468)
+|||.+... .......++||..|.|||++.+..| ...-|||++|++||-++....||..
T Consensus 712 idfgsaa~~--ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 712 IDFGSAAYT--KSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred eeccchhhh--cCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence 999998764 3345566789999999999998876 4568999999999999999999763
No 397
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96 E-value=2e-30 Score=232.20 Aligned_cols=256 Identities=25% Similarity=0.319 Sum_probs=188.8
Q ss_pred hCccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC------
Q 012219 170 EDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK------ 242 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 242 (468)
.+|.-...+|.|.- .|..+. .-.++.||+|++...... ....+...+|..++..++|+|+++++.++.-.+
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n-~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQN-QTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCcccc-CccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 34555667888877 555553 346899999998776333 233456679999999999999999999886433
Q ss_pred EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccc
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVA 322 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~ 322 (468)
..++|||+|. .+|...+.. .++......|..|++.|+.||| +.||+||||||+||++..+...||.|||+|
T Consensus 95 e~y~v~e~m~-~nl~~vi~~-----elDH~tis~i~yq~~~~ik~lh---s~~IihRdLkPsnivv~~~~~lKi~dfg~a 165 (369)
T KOG0665|consen 95 EVYLVMELMD-ANLCQVILM-----ELDHETISYILYQMLCGIKHLH---SAGIIHRDLKPSNIVVNSDCTLKILDFGLA 165 (369)
T ss_pred hHHHHHHhhh-hHHHHHHHH-----hcchHHHHHHHHHHHHHHHHHH---hcceeecccCcccceecchhheeeccchhh
Confidence 4789999996 588888762 2677888899999999999999 889999999999999999999999999999
Q ss_pred ccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCccccc-chhh----------------
Q 012219 323 RLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSS-SWSL---------------- 385 (468)
Q Consensus 323 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~-~~~~---------------- 385 (468)
+.-... -..+..+.|..|.|||++.+..+.+.+||||.||++.||++|+.-|...... .|..
T Consensus 166 r~e~~~-~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL 244 (369)
T KOG0665|consen 166 RTEDTD-FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQL 244 (369)
T ss_pred cccCcc-cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHh
Confidence 875443 3455677889999999999988999999999999999999999876532110 0000
Q ss_pred -----------hc--cccccc-ccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 386 -----------DK--NIKLID-LLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 386 -----------~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
.+ .....+ +.|..+.... ...........+++.+||-.+|++|.++++++++
T Consensus 245 ~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~-e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 245 QPTVRNYVENRPQYQAISFSELFPDSLFPVVL-EGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred hHHHHHHhhcChHhhccchhhhCCcccccccc-cCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 00 000000 0111111110 0011122336678999999999999999999865
No 398
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.96 E-value=1.3e-28 Score=224.89 Aligned_cols=199 Identities=36% Similarity=0.546 Sum_probs=171.3
Q ss_pred ccccceeeeeCCceEEEEEcCC-CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEe
Q 012219 172 FHIKYCIGTGGYGSVYRARLPS-GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEY 250 (468)
Q Consensus 172 ~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (468)
|.+.+.||+|++|.||++...+ ++.+++|.+...... ...+.+.+|++.+.+++|+|++++++++......++++||
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~ 78 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE--KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEY 78 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch--HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEec
Confidence 4567889999999999998764 899999999866543 2356888999999999999999999999998999999999
Q ss_pred ccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCC-
Q 012219 251 MEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDS- 329 (468)
Q Consensus 251 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~- 329 (468)
+++++|.+++...... +++.....++.+++.++.+|| ..+++|+|++|+||+++.++.++|+|||.+.......
T Consensus 79 ~~~~~L~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~lh---~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~ 153 (225)
T smart00221 79 CEGGDLFDYLRKKGGK--LSEEEARFYLRQILEALEYLH---SLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA 153 (225)
T ss_pred cCCCCHHHHHHhcccC--CCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc
Confidence 9999999998764322 788999999999999999999 6799999999999999999999999999998765332
Q ss_pred CCceeccccccccccccc-cCCCCCccchhhHHHHHHHHHHhCCCCCCc
Q 012219 330 SNRTLLAGTYGYIAPELA-YTMVVTEKCDVYSFGVVALEVLMGKHPGEL 377 (468)
Q Consensus 330 ~~~~~~~g~~~y~aPE~~-~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~ 377 (468)
.......++..|++||.. ....++.++|||+||++++||++|+.||..
T Consensus 154 ~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 154 ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 122334577889999998 666788899999999999999999999964
No 399
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.96 E-value=1.3e-30 Score=253.05 Aligned_cols=252 Identities=27% Similarity=0.401 Sum_probs=199.3
Q ss_pred hhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.++|.....+|.|.+|.|||++. ..++..|+|+++.....+ .+...+|+-+++..+|+||+.++|.+......++.
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd---~~~iqqei~~~~dc~h~nivay~gsylr~dklwic 90 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDD---FSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWIC 90 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCcc---ccccccceeeeecCCCcChHHHHhhhhhhcCcEEE
Confidence 36788899999999999999974 578999999998765543 34556899999999999999999999999999999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
||||.+|+|.+..+..+. +++.++..+.+...+|++||| +.+-+|||||-.||++++.+.+|++|||.+-.+..
T Consensus 91 MEycgggslQdiy~~Tgp---lselqiayvcRetl~gl~ylh---s~gk~hRdiKGanilltd~gDvklaDfgvsaqita 164 (829)
T KOG0576|consen 91 MEYCGGGSLQDIYHVTGP---LSELQIAYVCRETLQGLKYLH---SQGKIHRDIKGANILLTDEGDVKLADFGVSAQITA 164 (829)
T ss_pred EEecCCCcccceeeeccc---chhHHHHHHHhhhhccchhhh---cCCcccccccccceeecccCceeecccCchhhhhh
Confidence 999999999998876554 888899999999999999999 88999999999999999999999999999877765
Q ss_pred CCCCceecccccccccccccc---CCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccc
Q 012219 328 DSSNRTLLAGTYGYIAPELAY---TMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVD 404 (468)
Q Consensus 328 ~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (468)
.-.....+.||+.|||||+.. .+.|..++|||+.|+...|+---++|.-+....+...- -.....+|.-.....
T Consensus 165 ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~L---mTkS~~qpp~lkDk~ 241 (829)
T KOG0576|consen 165 TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFL---MTKSGFQPPTLKDKT 241 (829)
T ss_pred hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHH---hhccCCCCCcccCCc
Confidence 555556678999999999763 56799999999999999999887777433222111111 011111221111111
Q ss_pred hhHHHHHHHHHHHHHhcccCCCCCCCCHHHHH
Q 012219 405 QKIRQDIILVSTVAFSCLRSQPKSRPTMQLVS 436 (468)
Q Consensus 405 ~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~ 436 (468)
.+ -..+.++++.|+.++|++||+++.++
T Consensus 242 -kw---s~~fh~fvK~altknpKkRptaeklL 269 (829)
T KOG0576|consen 242 -KW---SEFFHNFVKGALTKNPKKRPTAEKLL 269 (829)
T ss_pred -cc---hHHHHHHHHHHhcCCCccCCChhhhe
Confidence 11 11277899999999999999986554
No 400
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.96 E-value=6.4e-30 Score=223.71 Aligned_cols=251 Identities=22% Similarity=0.335 Sum_probs=183.6
Q ss_pred hhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEE-EeeCCEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGF-CLHRKCMF 245 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~-~~~~~~~~ 245 (468)
.+.|.+.+.+|+|.||.+-.+.++ +.+.+++|.+...... +++|.+|...--.| .|.||+.-++. ++..+.++
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt----~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~Yv 98 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTT----QADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYV 98 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhh----HHHHHHHhccceeeccchhhhHHHHHHhhcCceEE
Confidence 357889999999999999999765 5778999999877654 57899998876666 58999988765 45567788
Q ss_pred EEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee-CC-CCCeEEeeccccc
Q 012219 246 LIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLL-NS-ELEAFVADFGVAR 323 (468)
Q Consensus 246 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll-~~-~~~~kl~Dfg~~~ 323 (468)
.++||++.|+|.+-+... ++.+....+++.|+++|+.|+| +..+||||||.+|||+ +. ..++|++|||..+
T Consensus 99 F~qE~aP~gdL~snv~~~----GigE~~~K~v~~ql~SAi~fMH---sknlVHRdlK~eNiLif~~df~rvKlcDFG~t~ 171 (378)
T KOG1345|consen 99 FVQEFAPRGDLRSNVEAA----GIGEANTKKVFAQLLSAIEFMH---SKNLVHRDLKAENILIFDADFYRVKLCDFGLTR 171 (378)
T ss_pred EeeccCccchhhhhcCcc----cccHHHHHHHHHHHHHHHHHhh---ccchhhcccccceEEEecCCccEEEeeeccccc
Confidence 999999999998887653 3778888899999999999999 8899999999999998 33 3589999999987
Q ss_pred cccCCCCCceeccccccccccccccCC-----CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCC
Q 012219 324 LLNFDSSNRTLLAGTYGYIAPELAYTM-----VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPR 398 (468)
Q Consensus 324 ~~~~~~~~~~~~~g~~~y~aPE~~~~~-----~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 398 (468)
..+.. ......+..|.|||+.... ...+.+|||.||++++..+||+.||+.........-.......-..+.
T Consensus 172 k~g~t---V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~ 248 (378)
T KOG1345|consen 172 KVGTT---VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPA 248 (378)
T ss_pred ccCce---ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCcc
Confidence 65421 1222345679999976532 456789999999999999999999974322211111111111112222
Q ss_pred CCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 399 LSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 399 ~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
++..+...... .+++..+-+..+|++|--..++..
T Consensus 249 ~P~~F~~fs~~----a~r~Fkk~lt~~~~drcki~~~kk 283 (378)
T KOG1345|consen 249 LPKKFNPFSEK----ALRLFKKSLTPRFKDRCKIWTAKK 283 (378)
T ss_pred CchhhcccCHH----HHHHHHHhcCCcccccchhHHHHH
Confidence 33222222222 556777889999999965555443
No 401
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=9.3e-31 Score=229.10 Aligned_cols=195 Identities=32% Similarity=0.393 Sum_probs=160.9
Q ss_pred ccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCC-----EEEEE
Q 012219 174 IKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRK-----CMFLI 247 (468)
Q Consensus 174 ~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~lv 247 (468)
-...||-|+||.||.++. ++|+.||.|++.... ......+.+.+|++++..++|.|++..+++..-.. +.|++
T Consensus 57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvf-q~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVF-QNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CCCcccccceeEEEeccCCCCccchhHhhcchHH-HHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 356799999999999975 579999999997543 33455678889999999999999999988765432 35778
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
+|.|. .+|...+-.... ++...+.-++.||.+||+||| +.+|.||||||.|.|++.+...||+|||+++.-..
T Consensus 136 TELmQ-SDLHKIIVSPQ~---Ls~DHvKVFlYQILRGLKYLH---sA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 136 TELMQ-SDLHKIIVSPQA---LTPDHVKVFVYQILRGLKYLH---TANILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHH-hhhhheeccCCC---CCcchhhhhHHHHHhhhHHHh---hcchhhccCCCccEEeccCceEEecccccccccch
Confidence 88885 477776654433 677777788999999999999 88999999999999999999999999999987654
Q ss_pred CC-CCceeccccccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCC
Q 012219 328 DS-SNRTLLAGTYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGE 376 (468)
Q Consensus 328 ~~-~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~ 376 (468)
+. ...+..+-|..|+|||.+.+. .|+.+.||||.|||+.|++..+..|+
T Consensus 209 d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQ 259 (449)
T KOG0664|consen 209 RDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQ 259 (449)
T ss_pred hhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhh
Confidence 32 334445678899999999875 68999999999999999999887775
No 402
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.95 E-value=9.4e-29 Score=233.84 Aligned_cols=200 Identities=24% Similarity=0.299 Sum_probs=170.5
Q ss_pred HhhCccccceeeeeCCceEEEEEc-CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc------CCceeeEEEEEee
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARL-PSGKVVALKKLHRSETEELASLESFGNEARLLSQIR------HRNIVKLYGFCLH 240 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~l~~~~~~ 240 (468)
.-.+|.+....|+|-|++|.+|.. .-|..||||++.....- .+.=..|+++|++|+ --|.++++-.|..
T Consensus 430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M----~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~h 505 (752)
T KOG0670|consen 430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM----HKTGLKELEILKKLNDADPEDKFHCLRLFRHFKH 505 (752)
T ss_pred hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH----hhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhh
Confidence 346788889999999999999965 45789999999876543 244558999999995 2478888888999
Q ss_pred CCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC-CeEEeec
Q 012219 241 RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSEL-EAFVADF 319 (468)
Q Consensus 241 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~-~~kl~Df 319 (468)
.+++|||+|-+. -+|.+.|...+....+....+..++.|+.-||..|- ..+|+|.||||.|||+++.. ..|||||
T Consensus 506 knHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK---~c~vlHaDIKPDNiLVNE~k~iLKLCDf 581 (752)
T KOG0670|consen 506 KNHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLK---KCGVLHADIKPDNILVNESKNILKLCDF 581 (752)
T ss_pred cceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHH---hcCeeecccCccceEeccCcceeeeccC
Confidence 999999999885 599999999888888999999999999999999999 77999999999999998874 5799999
Q ss_pred cccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCc
Q 012219 320 GVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGEL 377 (468)
Q Consensus 320 g~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~ 377 (468)
|.|...+. ...+...-+..|.|||++.+..|+...|+||.||.||||.||+..|..
T Consensus 582 GSA~~~~e--neitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG 637 (752)
T KOG0670|consen 582 GSASFASE--NEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPG 637 (752)
T ss_pred cccccccc--ccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCC
Confidence 99976542 222333446679999999999999999999999999999999987754
No 403
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.95 E-value=3.2e-27 Score=207.62 Aligned_cols=170 Identities=21% Similarity=0.129 Sum_probs=125.1
Q ss_pred CChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCce
Q 012219 254 GSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRT 333 (468)
Q Consensus 254 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 333 (468)
|+|.++++..+ ..+++.+++.++.||+.||.|||+ .+ ||+||+++.++.+|+ ||+++......
T Consensus 1 GsL~~~l~~~~--~~l~~~~~~~i~~qi~~~L~~lH~---~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~---- 63 (176)
T smart00750 1 VSLADILEVRG--RPLNEEEIWAVCLQCLRALRELHR---QA------KSGNILLTWDGLLKL--DGSVAFKTPEQ---- 63 (176)
T ss_pred CcHHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHh---cC------CcccEeEcCccceee--ccceEeecccc----
Confidence 68999997543 348999999999999999999994 44 999999999999999 99998764322
Q ss_pred eccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHH
Q 012219 334 LLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIIL 413 (468)
Q Consensus 334 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (468)
..|++.|+|||++.+..++.++|||||||++|||+||+.||....................++.... ..... .....
T Consensus 64 -~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~ 140 (176)
T smart00750 64 -SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRS-NLESV-SAARS 140 (176)
T ss_pred -CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccc-cHHHH-Hhhhh
Confidence 2588999999999999999999999999999999999999865433211111110000000111000 01111 11124
Q ss_pred HHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 414 VSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 414 l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
+.+++.+||..+|++||++.++++++....
T Consensus 141 ~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~ 170 (176)
T smart00750 141 FADFMRVCASRLPQRREAANHYLAHCRALF 170 (176)
T ss_pred HHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence 788999999999999999999999887653
No 404
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.95 E-value=4.9e-28 Score=260.30 Aligned_cols=195 Identities=19% Similarity=0.224 Sum_probs=138.6
Q ss_pred hccC-CceeeEEEEE-------eeCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 012219 225 QIRH-RNIVKLYGFC-------LHRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPI 296 (468)
Q Consensus 225 ~l~h-~niv~l~~~~-------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~i 296 (468)
.++| +||+++++++ ......+.++||+ +++|.+++.... ..+++.+++.++.||++||.||| +.+|
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~--~~~~~~~~~~i~~qi~~al~~lH---~~gI 101 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD--RSVDAFECFHVFRQIVEIVNAAH---SQGI 101 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc--ccccHHHHHHHHHHHHHHHHHHH---hCCe
Confidence 3455 5788888877 2334577888987 569999997532 34899999999999999999999 7899
Q ss_pred EecCCCCCceeeCC-------------------CCCeEEeeccccccccCCC----------------CCceeccccccc
Q 012219 297 VHRDISSNNVLLNS-------------------ELEAFVADFGVARLLNFDS----------------SNRTLLAGTYGY 341 (468)
Q Consensus 297 vH~dlk~~NIll~~-------------------~~~~kl~Dfg~~~~~~~~~----------------~~~~~~~g~~~y 341 (468)
+||||||+|||++. ++.+|++|||+++...... .......||+.|
T Consensus 102 vHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y 181 (793)
T PLN00181 102 VVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY 181 (793)
T ss_pred eeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce
Confidence 99999999999954 4456667777665421100 001113578889
Q ss_pred cccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhc
Q 012219 342 IAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSC 421 (468)
Q Consensus 342 ~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~c 421 (468)
||||++.+..++.++|||||||++|||++|..|+........... .....+... ........++.+|
T Consensus 182 ~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~~~~~~-----~~~~~~~~~--------~~~~~~~~~~~~~ 248 (793)
T PLN00181 182 TSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLR-----HRVLPPQIL--------LNWPKEASFCLWL 248 (793)
T ss_pred EChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHHHHHHH-----HhhcChhhh--------hcCHHHHHHHHHh
Confidence 999999999999999999999999999999988653211100000 001111110 1112245678899
Q ss_pred ccCCCCCCCCHHHHHHH
Q 012219 422 LRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 422 l~~dP~~RPs~~~v~~~ 438 (468)
|+++|.+||+|.+++++
T Consensus 249 L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 249 LHPEPSCRPSMSELLQS 265 (793)
T ss_pred CCCChhhCcChHHHhhc
Confidence 99999999999999854
No 405
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.95 E-value=1.4e-27 Score=221.60 Aligned_cols=195 Identities=30% Similarity=0.420 Sum_probs=163.6
Q ss_pred HhhCccccceeeeeCCceEEEEEcC----CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CCceeeEEEEEeeCC
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARLP----SGKVVALKKLHRSETEELASLESFGNEARLLSQIR-HRNIVKLYGFCLHRK 242 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~ 242 (468)
..+.|...++||+|.|++||++.+. ..+.||+|.+...... ....+|+++|..+. +.||+++.+++..++
T Consensus 34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p-----~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP-----SRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc-----hHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 4467888999999999999999643 4678999999876544 35779999999995 999999999999999
Q ss_pred EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC-CCeEEeeccc
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSE-LEAFVADFGV 321 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~-~~~kl~Dfg~ 321 (468)
..++|+||++.....+++.. ++..++...+..+..||+++| ..||||||+||+|++.+.. +.-.|.|||+
T Consensus 109 ~v~ivlp~~~H~~f~~l~~~------l~~~~i~~Yl~~ll~Al~~~h---~~GIvHRDiKpsNFL~n~~t~rg~LvDFgL 179 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYRS------LSLAEIRWYLRNLLKALAHLH---KNGIVHRDIKPSNFLYNRRTQRGVLVDFGL 179 (418)
T ss_pred eeEEEecccCccCHHHHHhc------CCHHHHHHHHHHHHHHhhhhh---ccCccccCCCccccccccccCCceEEechh
Confidence 99999999999999888865 678889999999999999999 8899999999999999865 6678999999
Q ss_pred cccccCC----------------------------------CCC----------ceeccccccccccccccC-CCCCccc
Q 012219 322 ARLLNFD----------------------------------SSN----------RTLLAGTYGYIAPELAYT-MVVTEKC 356 (468)
Q Consensus 322 ~~~~~~~----------------------------------~~~----------~~~~~g~~~y~aPE~~~~-~~~~~~~ 356 (468)
|...... +.. .....||++|.|||++.. ..-++++
T Consensus 180 A~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qttai 259 (418)
T KOG1167|consen 180 AQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAI 259 (418)
T ss_pred HHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcc
Confidence 9722100 000 011358999999998875 4678899
Q ss_pred hhhHHHHHHHHHHhCCCCCC
Q 012219 357 DVYSFGVVALEVLMGKHPGE 376 (468)
Q Consensus 357 Dv~s~Gvil~el~tg~~p~~ 376 (468)
||||.|||++.+++++.||-
T Consensus 260 Diws~GVI~Lslls~~~PFf 279 (418)
T KOG1167|consen 260 DIWSAGVILLSLLSRRYPFF 279 (418)
T ss_pred ceeeccceeehhhccccccc
Confidence 99999999999999999974
No 406
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.93 E-value=4.6e-27 Score=205.93 Aligned_cols=252 Identities=20% Similarity=0.330 Sum_probs=189.2
Q ss_pred ccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEec
Q 012219 172 FHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYM 251 (468)
Q Consensus 172 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 251 (468)
..+.-+|.+...|..|+|++.. ..+++|++.-..... ..-++|..|.-.++.+.||||+.++|.|..+....++..||
T Consensus 192 lnl~tkl~e~hsgelwrgrwqg-ndivakil~vr~~t~-risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~m 269 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQG-NDIVAKILNVREVTA-RISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYM 269 (448)
T ss_pred hhhhhhhccCCCcccccccccC-cchhhhhhhhhhcch-hhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeec
Confidence 4445678899999999999964 456667776544332 23468999999999999999999999999999999999999
Q ss_pred cCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCC
Q 012219 252 EMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSN 331 (468)
Q Consensus 252 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~ 331 (468)
+.|||+..++.... ...+..++.+++.+||+|++|||+. .+-|.---|.+..|++|++.+++|+ .+-+++.. .
T Consensus 270 p~gslynvlhe~t~-vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltaris-mad~kfsf----q 342 (448)
T KOG0195|consen 270 PFGSLYNVLHEQTS-VVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARIS-MADTKFSF----Q 342 (448)
T ss_pred cchHHHHHHhcCcc-EEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhhee-cccceeee----e
Confidence 99999999997643 4477889999999999999999965 4445556799999999999999874 12222111 1
Q ss_pred ceeccccccccccccccCCCCC---ccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHH
Q 012219 332 RTLLAGTYGYIAPELAYTMVVT---EKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIR 408 (468)
Q Consensus 332 ~~~~~g~~~y~aPE~~~~~~~~---~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (468)
.......+.||+||.++..+.+ +++|+|||.+++||+.|...||.+.+....... -..+-+...+++. +.
T Consensus 343 e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmk---ialeglrv~ippg----is 415 (448)
T KOG0195|consen 343 EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMK---IALEGLRVHIPPG----IS 415 (448)
T ss_pred ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhh---hhhccccccCCCC----cc
Confidence 1112457889999998866533 578999999999999999999987654322211 1122333333333 33
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 409 QDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 409 ~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
.. +.+++.-|++.||.+||.++.++-.|+++
T Consensus 416 ~h---m~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 416 RH---MNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred HH---HHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 33 44567779999999999999999888765
No 407
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.92 E-value=1.1e-24 Score=209.23 Aligned_cols=166 Identities=20% Similarity=0.181 Sum_probs=128.0
Q ss_pred HhhCccccceeeeeCCceEEEEEcC--CCCEEEEEEecCcch--hhhhhHHHHHHHHHHHhhccCCceee-EEEEEeeCC
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARLP--SGKVVALKKLHRSET--EELASLESFGNEARLLSQIRHRNIVK-LYGFCLHRK 242 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~niv~-l~~~~~~~~ 242 (468)
..++|.+.+.||+|+||+||+|+.. +++.+|||++..... ......+.|.+|++++++++|+|+++ ++++ +
T Consensus 16 ~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----~ 91 (365)
T PRK09188 16 LSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----G 91 (365)
T ss_pred ccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----C
Confidence 3467999999999999999999754 577889998753311 11123467899999999999999985 4432 3
Q ss_pred EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC-CCCceeeCCCCCeEEeeccc
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDI-SSNNVLLNSELEAFVADFGV 321 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dl-k~~NIll~~~~~~kl~Dfg~ 321 (468)
..++||||+++++|... .. .. ...++.++++||.||| +.||+|||| ||+|||++.++.+||+|||+
T Consensus 92 ~~~LVmE~~~G~~L~~~-~~------~~---~~~~~~~i~~aL~~lH---~~gIiHrDL~KP~NILv~~~~~ikLiDFGl 158 (365)
T PRK09188 92 KDGLVRGWTEGVPLHLA-RP------HG---DPAWFRSAHRALRDLH---RAGITHNDLAKPQNWLMGPDGEAAVIDFQL 158 (365)
T ss_pred CcEEEEEccCCCCHHHh-Cc------cc---hHHHHHHHHHHHHHHH---HCCCeeCCCCCcceEEEcCCCCEEEEECcc
Confidence 57999999999999632 11 11 1467889999999999 789999999 99999999999999999999
Q ss_pred cccccCCCCCc--------eeccccccccccccccCC
Q 012219 322 ARLLNFDSSNR--------TLLAGTYGYIAPELAYTM 350 (468)
Q Consensus 322 ~~~~~~~~~~~--------~~~~g~~~y~aPE~~~~~ 350 (468)
|+.+....... ....+++.|+|||++...
T Consensus 159 A~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 159 ASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred ceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 98765432111 234578889999988643
No 408
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.91 E-value=1.3e-22 Score=195.91 Aligned_cols=259 Identities=31% Similarity=0.426 Sum_probs=196.4
Q ss_pred ccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCC-ceeeEEEEEeeCCEEEEEEEe
Q 012219 172 FHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHR-NIVKLYGFCLHRKCMFLIYEY 250 (468)
Q Consensus 172 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~-niv~l~~~~~~~~~~~lv~e~ 250 (468)
|.....||.|+||.||++... ..+++|.+.............|.+|+..+..+.|+ +++++.+++......++++++
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 566788999999999999876 88999999876654433467899999999999988 799999999877778999999
Q ss_pred ccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC-CeEEeeccccccccCCC
Q 012219 251 MEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSEL-EAFVADFGVARLLNFDS 329 (468)
Q Consensus 251 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~-~~kl~Dfg~~~~~~~~~ 329 (468)
+.++++.+++........+.......++.|++.++.|+| ..+++|||+||+||+++... .++++|||.++......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H---~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~ 156 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH---SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPG 156 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCC
Confidence 999999977765432124788899999999999999999 77899999999999999998 79999999998654333
Q ss_pred C------CceeccccccccccccccC---CCCCccchhhHHHHHHHHHHhCCCCCCccccc---chhhhccc-ccccccC
Q 012219 330 S------NRTLLAGTYGYIAPELAYT---MVVTEKCDVYSFGVVALEVLMGKHPGELLSSS---SWSLDKNI-KLIDLLD 396 (468)
Q Consensus 330 ~------~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~---~~~~~~~~-~~~~~~~ 396 (468)
. ......|+..|+|||.... ..+....|+||+|++++++++|..|+...... ........ .......
T Consensus 157 ~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (384)
T COG0515 157 STSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLA 236 (384)
T ss_pred ccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccc
Confidence 2 2355679999999999987 57888999999999999999999997654421 01000000 0000000
Q ss_pred CCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHH
Q 012219 397 PRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNE 438 (468)
Q Consensus 397 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~ 438 (468)
........ ......+.+++..|+..+|..|.++.+....
T Consensus 237 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 237 SPLSPSNP---ELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cccCcccc---chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 01111000 1111236678889999999999999776654
No 409
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=5.5e-23 Score=198.00 Aligned_cols=258 Identities=20% Similarity=0.241 Sum_probs=188.9
Q ss_pred CccccceeeeeCCceEEEEEcCCC--CEEEEEEecCcchhhhhhHHHHHHHHHHHhhccC----CceeeEEEEE-eeCCE
Q 012219 171 DFHIKYCIGTGGYGSVYRARLPSG--KVVALKKLHRSETEELASLESFGNEARLLSQIRH----RNIVKLYGFC-LHRKC 243 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~l~~~~-~~~~~ 243 (468)
+|.+...||+|+||.||.+..... ..+|+|.......... ..+..|..++..+.. +++..+++.. .....
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~---~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~ 95 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP---SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDF 95 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC---ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCce
Confidence 799999999999999999976543 4788888776433211 146678888888863 5888888888 47778
Q ss_pred EEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC-----CCeEEee
Q 012219 244 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSE-----LEAFVAD 318 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~-----~~~kl~D 318 (468)
.++||+.+ |.+|.++..... ...++....+.|+.|+..+|.++| +.|++||||||.|+++... ..+.+.|
T Consensus 96 ~~iVM~l~-G~sL~dl~~~~~-~~~fs~~T~l~ia~q~l~~l~~lH---~~G~iHRDiKp~N~~~g~~~~~~~~~~~llD 170 (322)
T KOG1164|consen 96 NFIVMSLL-GPSLEDLRKRNP-PGRFSRKTVLRIAIQNLNALEDLH---SKGFIHRDIKPENFVVGQSSRSEVRTLYLLD 170 (322)
T ss_pred eEEEEecc-CccHHHHHHhCC-CCCcCHhHHHHHHHHHHHHHHHHH---hcCcccCCcCHHHeeecCCCCcccceEEEEe
Confidence 89999988 779999886655 456999999999999999999999 8899999999999999765 4689999
Q ss_pred ccccc--cccCCC--------CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcc
Q 012219 319 FGVAR--LLNFDS--------SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKN 388 (468)
Q Consensus 319 fg~~~--~~~~~~--------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~ 388 (468)
||+++ ...... .......||..|+++....+...+.+.|+||++.++.|++.|..||.............
T Consensus 171 fGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~ 250 (322)
T KOG1164|consen 171 FGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFE 250 (322)
T ss_pred cCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHH
Confidence 99998 321111 11223559999999999999999999999999999999999999986544321111000
Q ss_pred cccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 389 IKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
........... ......+ +.++...+-..+...+|....+...+....
T Consensus 251 ~~~~~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~ 298 (322)
T KOG1164|consen 251 KDPRKLLTDRF----GDLKPEE---FAKILEYIDSLDYEDKPDYEKLAELLKDVF 298 (322)
T ss_pred HHhhhhccccc----cCCChHH---HHHHHHHhhccCCcCCCCHHHHHHHHHHHH
Confidence 00000000000 1111122 444555555689999999999988875544
No 410
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.89 E-value=4.6e-24 Score=218.23 Aligned_cols=254 Identities=21% Similarity=0.300 Sum_probs=182.9
Q ss_pred cccceeeeeCCceEEEEE-cCCCCEEEEEEec----CcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEE
Q 012219 173 HIKYCIGTGGYGSVYRAR-LPSGKVVALKKLH----RSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 173 ~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~----~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 247 (468)
.....+|.|++|.|+... ....+..+.|.+. ...... .....+..|+-+-..+.|+|++..+..+.+.....-.
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~-~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~ 399 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESER-KYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQS 399 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHH-HHhhhhhhheeecccccCCchhhhHHHHhhcccchhh
Confidence 346789999999888774 3344445555443 221111 1122256677778889999998887777766666666
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF 327 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~ 327 (468)
||||++ +|..++..... +...++..++.|+..|+.|+| ..|+.|||+|++|++++.++.+||+|||.+.....
T Consensus 400 mE~~~~-Dlf~~~~~~~~---~~~~e~~c~fKqL~~Gv~y~h---~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~ 472 (601)
T KOG0590|consen 400 MEYCPY-DLFSLVMSNGK---LTPLEADCFFKQLLRGVKYLH---SMGLAHRDLKLENLLVTENGILKIIDFGAASVFRY 472 (601)
T ss_pred hhcccH-HHHHHHhcccc---cchhhhhHHHHHHHHHHHHHH---hcCceeccCccccEEEecCCceEEeecCcceeecc
Confidence 999999 99999876522 777888899999999999999 88999999999999999999999999999977654
Q ss_pred CCCC----ceeccccccccccccccCCCCCc-cchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCc
Q 012219 328 DSSN----RTLLAGTYGYIAPELAYTMVVTE-KCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPP 402 (468)
Q Consensus 328 ~~~~----~~~~~g~~~y~aPE~~~~~~~~~-~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (468)
+... ....+|+..|+|||++....|++ ..||||.|+++..|.+|+.||................. .......
T Consensus 473 ~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~---~~~~~~~ 549 (601)
T KOG0590|consen 473 PWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSD---QRNIFEG 549 (601)
T ss_pred CcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhcccc---ccccccC
Confidence 3332 34467899999999999998876 58999999999999999999875433211110000000 0011111
Q ss_pred cchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 403 VDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 403 ~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
..............++.++++.||.+|.|+++|++
T Consensus 550 ~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 550 PNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred hHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 11222222334677899999999999999999983
No 411
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.89 E-value=3.8e-24 Score=218.87 Aligned_cols=253 Identities=21% Similarity=0.253 Sum_probs=181.4
Q ss_pred CccccceeeeeCCceEEEEEcCCCCEEEEEEecCcch-hhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEE
Q 012219 171 DFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSET-EELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYE 249 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 249 (468)
++...+.||++.|=+|.+|+.++|. |+||++-+... -.....++-..|++ ...++|||.+++.-+-...+..|||-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 5777888999999999999998887 89999876552 22222333334444 455689999998877777777888889
Q ss_pred eccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccC--
Q 012219 250 YMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNF-- 327 (468)
Q Consensus 250 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~-- 327 (468)
|+.. +|.|.+....- +...+..-|+.|+..||..+| ..||+|||||.+|||++.-.-+.|+||..-+....
T Consensus 102 yvkh-nLyDRlSTRPF---L~~iEKkWiaFQLL~al~qcH---~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe 174 (1431)
T KOG1240|consen 102 YVKH-NLYDRLSTRPF---LVLIEKKWIAFQLLKALSQCH---KLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPE 174 (1431)
T ss_pred HHhh-hhhhhhccchH---HHHHHHHHHHHHHHHHHHHHH---HcCccccccccceEEEeeechhhhhcccccCCccCCC
Confidence 9865 89999876443 667788889999999999999 88999999999999999999999999987654321
Q ss_pred CCCC-ce----eccccccccccccccCC-----------CCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhcccc
Q 012219 328 DSSN-RT----LLAGTYGYIAPELAYTM-----------VVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIK 390 (468)
Q Consensus 328 ~~~~-~~----~~~g~~~y~aPE~~~~~-----------~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~ 390 (468)
+... .. ....-.+|.|||.+... ..+++.||||+||+++||++ |++||...+...+.......
T Consensus 175 DNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~ 254 (1431)
T KOG1240|consen 175 DNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADD 254 (1431)
T ss_pred CCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccC
Confidence 1111 11 12234579999976531 15678999999999999998 89998754322221110000
Q ss_pred cccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcC
Q 012219 391 LIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARN 443 (468)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~ 443 (468)
....+ ....+. .+.+++..|++.||++|.++++.++.-....
T Consensus 255 ~e~~L----e~Ied~-------~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~~ 296 (1431)
T KOG1240|consen 255 PEQLL----EKIEDV-------SLRNLILSMIQRDPSKRLSAEDYLQKYRGLV 296 (1431)
T ss_pred HHHHH----HhCcCc-------cHHHHHHHHHccCchhccCHHHHHHhhhccc
Confidence 00000 000000 2667899999999999999999998755443
No 412
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=7.9e-22 Score=177.93 Aligned_cols=258 Identities=19% Similarity=0.237 Sum_probs=191.5
Q ss_pred hCccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CCceeeEEEEEeeCCEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEELASLESFGNEARLLSQIR-HRNIVKLYGFCLHRKCMFLI 247 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv 247 (468)
-.|.+.++||+|+||.++.|. +-++..||||.-..... ..++..|.+..+.|. .+.|..++-|-.....-.||
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~-----APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLV 102 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE-----APQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILV 102 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccCC-----cchHHHHHHHHHHHcCCCCCCceeeeccccchhhhh
Confidence 368999999999999999995 56899999998765443 246778898888885 68898888888888888999
Q ss_pred EEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC-----CCeEEeecccc
Q 012219 248 YEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSE-----LEAFVADFGVA 322 (468)
Q Consensus 248 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~-----~~~kl~Dfg~~ 322 (468)
+|.+ |-||.|+..-.+. .++...++.+|.|++.-++|+| ++.+|.|||||+|.|+... ..+.+.|||+|
T Consensus 103 idLL-GPSLEDLFD~CgR--~FSvKTV~miA~Qmi~rie~vH---~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmA 176 (449)
T KOG1165|consen 103 IDLL-GPSLEDLFDLCGR--RFSVKTVAMIAKQMITRIEYVH---EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMA 176 (449)
T ss_pred hhhh-CcCHHHHHHHhcC--cccHHhHHHHHHHHHHHHHHHH---hcceeecccCccceeecCCCCCCCceEEEEeccch
Confidence 9988 7799998876543 4899999999999999999999 8899999999999999643 45789999999
Q ss_pred ccccCCCC-------CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccccccccc
Q 012219 323 RLLNFDSS-------NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLL 395 (468)
Q Consensus 323 ~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 395 (468)
+.+..... ......||.+||+-.-..+.+-+.+.|.=|+|-+++..+-|..||+.+...... .+..++ -
T Consensus 177 K~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK-~kYeKI---G 252 (449)
T KOG1165|consen 177 KEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNK-EKYEKI---G 252 (449)
T ss_pred hhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchH-HHHHHh---c
Confidence 98753322 123357999999998888888999999999999999999999999876543211 111111 1
Q ss_pred CCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 396 DPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
+..-..+..........++...+.-.-..+-.+-|+.+-+...|...
T Consensus 253 e~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dv 299 (449)
T KOG1165|consen 253 ETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDV 299 (449)
T ss_pred cccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 22222222222222222344444444556777889876666555443
No 413
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.88 E-value=1.6e-22 Score=197.63 Aligned_cols=218 Identities=24% Similarity=0.410 Sum_probs=163.0
Q ss_pred HhhccCCceeeEEEEEeeCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCC
Q 012219 223 LSQIRHRNIVKLYGFCLHRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDIS 302 (468)
Q Consensus 223 l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk 302 (468)
|+.+.|.|+.+++|.+.++...+.|.+||..|+|.+.+... ...++|.....++.+|+.||.|+|. ++--.|+.++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~--~~~~d~~F~~s~~rdi~~Gl~ylh~--s~i~~hg~l~ 76 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE--DIKLDYFFILSFIRDISKGLAYLHN--SPIGYHGALK 76 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc--ccCccHHHHHHHHHHHHHHHHHHhc--Ccceeeeeec
Confidence 35688999999999999999999999999999999999863 3458999999999999999999994 3333999999
Q ss_pred CCceeeCCCCCeEEeeccccccccC--CCCCceeccccccccccccccCCC-------CCccchhhHHHHHHHHHHhCCC
Q 012219 303 SNNVLLNSELEAFVADFGVARLLNF--DSSNRTLLAGTYGYIAPELAYTMV-------VTEKCDVYSFGVVALEVLMGKH 373 (468)
Q Consensus 303 ~~NIll~~~~~~kl~Dfg~~~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~-------~~~~~Dv~s~Gvil~el~tg~~ 373 (468)
++|+++|..+.+|++|||+...... .........-..-|.|||.+.... .+.+.||||||++++|+++.+.
T Consensus 77 s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~ 156 (484)
T KOG1023|consen 77 SSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSG 156 (484)
T ss_pred cccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccC
Confidence 9999999999999999999877632 111112223445799999987641 4677999999999999999999
Q ss_pred CCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhcCCC
Q 012219 374 PGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIARNKA 445 (468)
Q Consensus 374 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~~~~ 445 (468)
||+.........+....+.+.-.+.+.+...... +....+..++..||..+|++||++++|-..+....+.
T Consensus 157 ~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~-e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~ 227 (484)
T KOG1023|consen 157 PFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLN-ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKG 227 (484)
T ss_pred ccccccccCChHHHHHHHHhcCCCCcCcchhhhh-hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhccc
Confidence 9986443222111111111111222222222111 2222478899999999999999999999998877664
No 414
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=1.8e-22 Score=174.40 Aligned_cols=254 Identities=17% Similarity=0.248 Sum_probs=188.8
Q ss_pred hhCccccceeeeeCCceEEEEE-cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccC-CceeeEEEEEeeCCEEEE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRAR-LPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRH-RNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~l 246 (468)
...|.+.+.||+|+||.+|.|. ..+|..||+|+-...... .++..|..+...+++ ..|..+..|..+...-.+
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~h-----pqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvl 88 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKH-----PQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVL 88 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCCC-----cchhHHHHHHHHhccCCCCchhhhhcccccccee
Confidence 3579999999999999999994 678999999998765433 356789999999975 567777778888888899
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC---CCeEEeeccccc
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSE---LEAFVADFGVAR 323 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~---~~~kl~Dfg~~~ 323 (468)
|||.+ |-||.++..-... .++...++-++-|+..-++|+| .++++||||||+|.|..-+ ..+.++|||+|+
T Consensus 89 VMdLL-GPsLEdLfnfC~R--~ftmkTvLMLaDQml~RiEyvH---~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaK 162 (341)
T KOG1163|consen 89 VMDLL-GPSLEDLFNFCSR--RFTMKTVLMLADQMLSRIEYVH---LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAK 162 (341)
T ss_pred eeecc-CccHHHHHHHHhh--hhhHHhHHHHHHHHHHHHHHHH---hhccccccCCccceeeccccccceEEEEeccchh
Confidence 99988 7799998865443 3888899999999999999999 8899999999999999655 456799999998
Q ss_pred cccCCCC-------CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccC
Q 012219 324 LLNFDSS-------NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLD 396 (468)
Q Consensus 324 ~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 396 (468)
.+..... ......||.+|.+-....+..-+...|+=|+|.++..+--|..||+.+........ ...+..
T Consensus 163 ky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QK----yEkI~E 238 (341)
T KOG1163|consen 163 KYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQK----YEKISE 238 (341)
T ss_pred hhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHH----HHHHHH
Confidence 8743221 22335799999988877777788899999999999999999999987654322111 111222
Q ss_pred CCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHH
Q 012219 397 PRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSN 437 (468)
Q Consensus 397 ~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~ 437 (468)
..+..+..........++.-.+.-|-..--++-|+..-+.+
T Consensus 239 kK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrq 279 (341)
T KOG1163|consen 239 KKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQ 279 (341)
T ss_pred hhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHH
Confidence 22222222222222233445566677777777787644443
No 415
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.88 E-value=2.7e-22 Score=177.31 Aligned_cols=143 Identities=20% Similarity=0.185 Sum_probs=108.0
Q ss_pred cceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhh-----------------------HHHHHHHHHHHhhccCCce
Q 012219 175 KYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELAS-----------------------LESFGNEARLLSQIRHRNI 231 (468)
Q Consensus 175 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~-----------------------~~~~~~e~~~l~~l~h~ni 231 (468)
...||+|+||.||+|...+|+.||||+++......... ......|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 46799999999999988899999999997653211000 1122359999999987776
Q ss_pred eeEEEEEeeCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC
Q 012219 232 VKLYGFCLHRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSE 311 (468)
Q Consensus 232 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~ 311 (468)
.....+... ..++||||++++++....... ..++..+...++.|++.+|.++|+ +.+|+||||||+||+++ +
T Consensus 82 ~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~---~~~~~~~~~~i~~qi~~~L~~l~H--~~giiHrDlkP~NIli~-~ 153 (190)
T cd05147 82 PCPEPILLK--SHVLVMEFIGDDGWAAPRLKD---APLSESKARELYLQVIQIMRILYQ--DCRLVHADLSEYNLLYH-D 153 (190)
T ss_pred CCCcEEEec--CCEEEEEEeCCCCCcchhhhc---CCCCHHHHHHHHHHHHHHHHHHHH--hCCcccCCCCHHHEEEE-C
Confidence 433332222 238999999988776543222 247889999999999999999932 67999999999999998 4
Q ss_pred CCeEEeeccccccc
Q 012219 312 LEAFVADFGVARLL 325 (468)
Q Consensus 312 ~~~kl~Dfg~~~~~ 325 (468)
+.++|+|||+|...
T Consensus 154 ~~v~LiDFG~a~~~ 167 (190)
T cd05147 154 GKLYIIDVSQSVEH 167 (190)
T ss_pred CcEEEEEccccccC
Confidence 78999999999754
No 416
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.88 E-value=1.6e-22 Score=180.68 Aligned_cols=184 Identities=14% Similarity=0.113 Sum_probs=138.2
Q ss_pred CCcCHHHHHH--HhhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHH------HHHHHHHHhhccCC
Q 012219 158 GRITFQDMIE--ATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLES------FGNEARLLSQIRHR 229 (468)
Q Consensus 158 ~~~~~~~~~~--~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~------~~~e~~~l~~l~h~ 229 (468)
....|.++.. ..++|...+.+|+|+||.||.... ++..+|+|.+............. |.+|++.+.+++|+
T Consensus 17 ~~~~~~~~~~~~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~ 95 (232)
T PRK10359 17 NDNKYKEIFDDFLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSE 95 (232)
T ss_pred CcccHHHHHHHHhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHC
Confidence 3334444433 357899999999999999999866 57789999997654433222233 67999999999999
Q ss_pred ceeeEEEEEeeC--------CEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC
Q 012219 230 NIVKLYGFCLHR--------KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDI 301 (468)
Q Consensus 230 niv~l~~~~~~~--------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dl 301 (468)
+|..+.+++... ...+++|||++|.+|.++.. ++. ....+++.++..+| ..|++|||+
T Consensus 96 GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-------~~~----~~~~~i~~~l~~lH---~~gi~H~Di 161 (232)
T PRK10359 96 GLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-------ISE----DVKAKIKASIESLH---QHGMVSGDP 161 (232)
T ss_pred CCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhh-------ccH----HHHHHHHHHHHHHH---HcCCccCCC
Confidence 999999886533 35789999999999987732 222 24568999999999 789999999
Q ss_pred CCCceeeCCCCCeEEeeccccccccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHH
Q 012219 302 SSNNVLLNSELEAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVL 369 (468)
Q Consensus 302 k~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~ 369 (468)
+|+||+++.++ ++++|||.......+... ..+.....+..++|+||||+.+.-+.
T Consensus 162 kp~Nili~~~g-i~liDfg~~~~~~e~~a~------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 162 HKGNFIVSKNG-LRIIDLSGKRCTAQRKAK------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred ChHHEEEeCCC-EEEEECCCcccccchhhH------------HHHHHHhHhcccccccceeEeehHHH
Confidence 99999999998 999999988654211111 01333445667899999999887654
No 417
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.86 E-value=5e-21 Score=169.96 Aligned_cols=143 Identities=22% Similarity=0.254 Sum_probs=110.7
Q ss_pred cceeeeeCCceEEEEEcCCCCEEEEEEecCcchhh-----------------------hhhHHHHHHHHHHHhhccCCce
Q 012219 175 KYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEE-----------------------LASLESFGNEARLLSQIRHRNI 231 (468)
Q Consensus 175 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------------~~~~~~~~~e~~~l~~l~h~ni 231 (468)
...||+|++|.||+|...+|+.||||+++...... ......+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 46799999999999987789999999998653210 0011234578999999999987
Q ss_pred eeEEEEEeeCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCeEecCCCCCceeeCC
Q 012219 232 VKLYGFCLHRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCT-PPIVHRDISSNNVLLNS 310 (468)
Q Consensus 232 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~-~~ivH~dlk~~NIll~~ 310 (468)
.....+.... .++||||++++++....... ..++..+...++.|++.++.++| . .||+||||||+||+++
T Consensus 82 ~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~---~~~~~~~~~~i~~~l~~~l~~lH---~~~givHrDlkP~NIll~- 152 (190)
T cd05145 82 PVPEPILLKK--NVLVMEFIGDDGSPAPRLKD---VPLEEEEAEELYEQVVEQMRRLY---QEAGLVHGDLSEYNILYH- 152 (190)
T ss_pred CCceEEEecC--CEEEEEEecCCCchhhhhhh---ccCCHHHHHHHHHHHHHHHHHHH---HhCCEecCCCChhhEEEE-
Confidence 5444443332 48999999988654432221 23677888999999999999999 5 7999999999999999
Q ss_pred CCCeEEeecccccccc
Q 012219 311 ELEAFVADFGVARLLN 326 (468)
Q Consensus 311 ~~~~kl~Dfg~~~~~~ 326 (468)
++.++|+|||++....
T Consensus 153 ~~~~~liDFG~a~~~~ 168 (190)
T cd05145 153 DGKPYIIDVSQAVELD 168 (190)
T ss_pred CCCEEEEEcccceecC
Confidence 8899999999997654
No 418
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.86 E-value=2.2e-21 Score=178.50 Aligned_cols=236 Identities=19% Similarity=0.233 Sum_probs=150.8
Q ss_pred CccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc----------CCceeeEEEEEe
Q 012219 171 DFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIR----------HRNIVKLYGFCL 239 (468)
Q Consensus 171 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~----------h~niv~l~~~~~ 239 (468)
.+.....||.|+++.||.+++. +++.+|||++...........+++.+|.-....+. |-.++-.++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 3456778999999999999764 58999999987666555556778877776555432 222222222221
Q ss_pred ---------eC---C-----EEEEEEEeccCCChhhhhhc----CcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEe
Q 012219 240 ---------HR---K-----CMFLIYEYMEMGSLFCVLRT----DEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVH 298 (468)
Q Consensus 240 ---------~~---~-----~~~lv~e~~~~gsL~~~l~~----~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH 298 (468)
.. . ..+++|+-+. ++|.+++.. ......+....++.+..|+.+.+++|| +.|++|
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh---~~GlVH 168 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLH---SYGLVH 168 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTEEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHh---hcceEe
Confidence 11 1 1367788774 588777542 111122445666788899999999999 789999
Q ss_pred cCCCCCceeeCCCCCeEEeeccccccccCCCCCceeccccccccccccccC--------CCCCccchhhHHHHHHHHHHh
Q 012219 299 RDISSNNVLLNSELEAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYT--------MVVTEKCDVYSFGVVALEVLM 370 (468)
Q Consensus 299 ~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~~~~~Dv~s~Gvil~el~t 370 (468)
+||+|+|++++.+|.++|+||+.....+. .......+..|.+||.... ..++.+.|.|++|+++|.|++
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~---~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC 245 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGT---RYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWC 245 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTE---EEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHH
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCc---eeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHH
Confidence 99999999999999999999988765432 1121345577999997643 257889999999999999999
Q ss_pred CCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCC
Q 012219 371 GKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSR 429 (468)
Q Consensus 371 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~R 429 (468)
|+.||+.......... .+. .+. +....+..+|..+|+.+|.+|
T Consensus 246 ~~lPf~~~~~~~~~~~-----------~f~----~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 246 GRLPFGLSSPEADPEW-----------DFS----RCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp SS-STCCCGGGSTSGG-----------GGT----TSS----HHHHHHHHHHT-SSGGGS
T ss_pred ccCCCCCCCccccccc-----------cch----hcC-CcCHHHHHHHHHHccCCcccC
Confidence 9999985533211111 011 111 222236779999999999988
No 419
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.84 E-value=4e-20 Score=161.68 Aligned_cols=184 Identities=13% Similarity=0.069 Sum_probs=135.9
Q ss_pred ccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhh-hhHHHHHHHHHHHhhcc-CCceeeEEEEEeeCCEEEEEEEec
Q 012219 174 IKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEEL-ASLESFGNEARLLSQIR-HRNIVKLYGFCLHRKCMFLIYEYM 251 (468)
Q Consensus 174 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 251 (468)
....|++|+||+||.+.. .+.+++.+.+.....-.. .....|.+|+++|+++. |+++.+++++ +..+++|||+
T Consensus 6 ~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmeyI 80 (218)
T PRK12274 6 VNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSYL 80 (218)
T ss_pred cceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEeee
Confidence 456799999999998876 677888777765543111 11235789999999995 5789999886 3468999999
Q ss_pred cCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC-CCCceeeCCCCCeEEeeccccccccCCCC
Q 012219 252 EMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDI-SSNNVLLNSELEAFVADFGVARLLNFDSS 330 (468)
Q Consensus 252 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dl-k~~NIll~~~~~~kl~Dfg~~~~~~~~~~ 330 (468)
.|.+|...... ....++.|++.+|.++| ..||+|||| ||+||+++.++.++|+|||++........
T Consensus 81 ~G~~L~~~~~~----------~~~~~~~qi~~~L~~lH---~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~ 147 (218)
T PRK12274 81 AGAAMYQRPPR----------GDLAYFRAARRLLQQLH---RCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRAR 147 (218)
T ss_pred cCccHHhhhhh----------hhHHHHHHHHHHHHHHH---HCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcch
Confidence 99988654321 11357789999999999 789999999 79999999999999999999986543322
Q ss_pred C----c---------eeccccccccccccccCC-CCC-ccchhhHHHHHHHHHHhCCCCC
Q 012219 331 N----R---------TLLAGTYGYIAPELAYTM-VVT-EKCDVYSFGVVALEVLMGKHPG 375 (468)
Q Consensus 331 ~----~---------~~~~g~~~y~aPE~~~~~-~~~-~~~Dv~s~Gvil~el~tg~~p~ 375 (468)
. . .....++.|++|+...-. ..+ ...+.++.|.-+|.++||+.|.
T Consensus 148 ~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~ 207 (218)
T PRK12274 148 WMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLH 207 (218)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCc
Confidence 1 0 011246667777643322 222 3568889999999999999884
No 420
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.81 E-value=3.5e-21 Score=188.19 Aligned_cols=187 Identities=29% Similarity=0.382 Sum_probs=155.0
Q ss_pred eeeeCCceEEEEE----cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CCceeeEEEEEeeCCEEEEEEEecc
Q 012219 178 IGTGGYGSVYRAR----LPSGKVVALKKLHRSETEELASLESFGNEARLLSQIR-HRNIVKLYGFCLHRKCMFLIYEYME 252 (468)
Q Consensus 178 lg~G~~g~Vy~~~----~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 252 (468)
+|+|.||.|+.++ .+.|..+|.|+++.......... ....|..++...+ ||.+|++.-.++.+...+++.+|..
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~-~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT-HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhccccccccccccc-ccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 6899999999884 34577889998876543322222 4557888888887 9999999999999999999999999
Q ss_pred CCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCc
Q 012219 253 MGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNR 332 (468)
Q Consensus 253 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~ 332 (468)
+|.+...+..... +...........++-+++++| +.+++|||+|++||+++.+|.+++.|||+++..-.....
T Consensus 81 gg~lft~l~~~~~---f~~~~~~~~~aelaLald~lh---~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~- 153 (612)
T KOG0603|consen 81 GGDLFTRLSKEVM---FDELDVAFYLAELALALDHLH---KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA- 153 (612)
T ss_pred cchhhhccccCCc---hHHHHHHHHHHHHHHHHhhcc---hhHHHHhcccccceeecccCccccCCchhhhHhHhhhhc-
Confidence 9999888765432 566666677788999999999 889999999999999999999999999999875422221
Q ss_pred eeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCc
Q 012219 333 TLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGEL 377 (468)
Q Consensus 333 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~ 377 (468)
+||..|||||+.. .....+|.||||++++||+||..||..
T Consensus 154 ---cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 154 ---CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred ---ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 8999999999988 567789999999999999999999875
No 421
>PRK10345 hypothetical protein; Provisional
Probab=99.80 E-value=6.5e-19 Score=157.16 Aligned_cols=136 Identities=17% Similarity=0.181 Sum_probs=104.1
Q ss_pred cccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-----cCCceeeEEEEEeeCC---E-
Q 012219 173 HIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQI-----RHRNIVKLYGFCLHRK---C- 243 (468)
Q Consensus 173 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~l~~~~~~~~---~- 243 (468)
.-...||+|+||.||. +++....+||++...... ..+.+.+|++++..+ .||||++++|++.++. .
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~---~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v 79 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDG---GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYV 79 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCeEEEEEeccccc---hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEE
Confidence 3457899999999996 433333479988754322 245788999999999 5799999999998864 3
Q ss_pred EEEEEEe--ccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHH-HHHHhcCCCCeEecCCCCCceeeCC----CCCeEE
Q 012219 244 MFLIYEY--MEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHAL-SYLHHDCTPPIVHRDISSNNVLLNS----ELEAFV 316 (468)
Q Consensus 244 ~~lv~e~--~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l-~~LH~~~~~~ivH~dlk~~NIll~~----~~~~kl 316 (468)
..+|+|| +.+|+|.+++.... +++. ..++.+++.++ +||| +.+|+||||||+||+++. +..++|
T Consensus 80 ~~~I~e~~G~~~~tL~~~l~~~~----~~e~--~~~~~~~L~~l~~yLh---~~~IvhrDlKp~NILl~~~~~~~~~~~L 150 (210)
T PRK10345 80 YDVIADFDGKPSITLTEFAEQCR----YEED--VAQLRQLLKKLKRYLL---DNRIVTMELKPQNILCQRISESEVIPVV 150 (210)
T ss_pred EEEEecCCCCcchhHHHHHHccc----ccHh--HHHHHHHHHHHHHHHH---HCCEeecCCCHHHEEEeccCCCCCcEEE
Confidence 3478999 56799999996531 4444 35677888777 9999 789999999999999974 347999
Q ss_pred eecccc
Q 012219 317 ADFGVA 322 (468)
Q Consensus 317 ~Dfg~~ 322 (468)
+||+.+
T Consensus 151 iDg~G~ 156 (210)
T PRK10345 151 CDNIGE 156 (210)
T ss_pred EECCCC
Confidence 994433
No 422
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.78 E-value=9.8e-19 Score=182.73 Aligned_cols=246 Identities=22% Similarity=0.253 Sum_probs=176.8
Q ss_pred HhhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc---CCceeeEEEEEeeCCEE
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIR---HRNIVKLYGFCLHRKCM 244 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~ 244 (468)
..+.|.+...||+|+||+||+|...+|+.||+|+-+....-+.- -=.+++.+|+ -+-|..+...+.-.+.-
T Consensus 696 ~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfY------I~~q~~~RLk~~~~~~~~~~~~a~~~~~~S 769 (974)
T KOG1166|consen 696 GGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFY------ICLQVMERLKPQMLPSIMHISSAHVFQNAS 769 (974)
T ss_pred cceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeee------ehHHHHHhhchhhhcchHHHHHHHccCCcc
Confidence 34678888999999999999998888999999998876543221 1223444555 12223333333456677
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC-------CCCeEEe
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS-------ELEAFVA 317 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~-------~~~~kl~ 317 (468)
++|+||.+.|+|.+++... ..++|..++.++.|++.-+++|| ..+||||||||+|.+|.. ...++|+
T Consensus 770 ~lv~ey~~~Gtlld~~N~~---~~m~e~lv~~~~~qml~ive~lH---~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lI 843 (974)
T KOG1166|consen 770 VLVSEYSPYGTLLDLINTN---KVMDEYLVMFFSCQMLRIVEHLH---AMGIIHGDIKPDNFLLRREICADSDSKGLYLI 843 (974)
T ss_pred eeeeeccccccHHHhhccC---CCCCchhhhHHHHHHHHHHHHHH---hcceecccCCcceeEeecccCCCCcccceEEE
Confidence 9999999999999999843 34899999999999999999999 889999999999999942 3457999
Q ss_pred eccccccccC--CCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccccccccc
Q 012219 318 DFGVARLLNF--DSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLL 395 (468)
Q Consensus 318 Dfg~~~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 395 (468)
|||.+-.+.. +.......++|-.+--+|+..+..++.+.|-|.++-+++-|+.|+.-- .. ......+
T Consensus 844 DfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q-~~----------~g~~~~~ 912 (974)
T KOG1166|consen 844 DFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYME-VK----------NGSSWMV 912 (974)
T ss_pred ecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHH-hc----------CCcceec
Confidence 9999976642 333445567888999999999999999999999999999999998752 00 0111111
Q ss_pred CCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHhc
Q 012219 396 DPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~~~ 442 (468)
+..+ ...+..++ ..+++..+|+.|-..=|...++...|++.
T Consensus 913 ~~~~----~Ry~~~~~--W~~~F~~lLN~~~~~~p~l~~lr~~~~~~ 953 (974)
T KOG1166|consen 913 KTNF----PRYWKRDM--WNKFFDLLLNPDCDTLPNLQELRTELEEV 953 (974)
T ss_pred cccc----hhhhhHHH--HHHHHHHHhCcCcccchhHHHHHHHHHHH
Confidence 1111 11222222 33566667775555556667776666553
No 423
>smart00090 RIO RIO-like kinase.
Probab=99.78 E-value=2.4e-18 Score=157.31 Aligned_cols=146 Identities=21% Similarity=0.181 Sum_probs=112.1
Q ss_pred hCccccceeeeeCCceEEEEE--cCCCCEEEEEEecCcchhh---------------------hhhHHHHHHHHHHHhhc
Q 012219 170 EDFHIKYCIGTGGYGSVYRAR--LPSGKVVALKKLHRSETEE---------------------LASLESFGNEARLLSQI 226 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~--~~~~~~vavK~~~~~~~~~---------------------~~~~~~~~~e~~~l~~l 226 (468)
..|.+.+.||+|++|.||+|. ..+|+.||+|+++...... ......+..|++.+.++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 357888999999999999998 5689999999987543110 00113456899999999
Q ss_pred cCCc--eeeEEEEEeeCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCC-eEecCCCC
Q 012219 227 RHRN--IVKLYGFCLHRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPP-IVHRDISS 303 (468)
Q Consensus 227 ~h~n--iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~-ivH~dlk~ 303 (468)
.+.. +.+++++. ..++||||++++++........ .+...+...++.|++.++.+|| ..+ ++||||||
T Consensus 108 ~~~~i~~p~~~~~~----~~~lV~E~~~g~~L~~~~~~~~---~~~~~~~~~i~~qi~~~l~~LH---~~g~iiH~Dikp 177 (237)
T smart00090 108 YEAGVPVPKPIAWR----RNVLVMEFIGGDGLPAPRLKDV---EPEEEEEFELYDDILEEMRKLY---KEGELVHGDLSE 177 (237)
T ss_pred HhcCCCCCeeeEec----CceEEEEEecCCcccccccccC---CcchHHHHHHHHHHHHHHHHHH---hcCCEEeCCCCh
Confidence 7633 44445432 3489999999988876543222 2555667889999999999999 778 99999999
Q ss_pred CceeeCCCCCeEEeecccccccc
Q 012219 304 NNVLLNSELEAFVADFGVARLLN 326 (468)
Q Consensus 304 ~NIll~~~~~~kl~Dfg~~~~~~ 326 (468)
+||+++ ++.++|+|||.+....
T Consensus 178 ~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 178 YNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred hhEEEE-CCCEEEEEChhhhccC
Confidence 999999 8899999999987543
No 424
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.78 E-value=2.7e-18 Score=155.43 Aligned_cols=137 Identities=20% Similarity=0.342 Sum_probs=113.8
Q ss_pred ceeeeeCCceEEEEEcCCCCEEEEEEecCcch-----hhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEe
Q 012219 176 YCIGTGGYGSVYRARLPSGKVVALKKLHRSET-----EELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEY 250 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 250 (468)
+.||+|++|.||+|.. .|..+++|+...... ........+.+|++++..++|+++.....++......+++|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 4699999999999987 677899998664322 1112234678899999999999988877777777788999999
Q ss_pred ccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 251 MEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 251 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
++|++|.+.+.... + .+..++.+++.+|.++| ..+++|||++|.||+++ ++.++++|||.+..
T Consensus 81 ~~G~~L~~~~~~~~------~-~~~~i~~~i~~~l~~lH---~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG------M-EELELSREIGRLVGKLH---SAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc------H-HHHHHHHHHHHHHHHHH---hCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999886421 2 77899999999999999 78999999999999999 78899999998864
No 425
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.77 E-value=2.9e-18 Score=153.49 Aligned_cols=148 Identities=20% Similarity=0.211 Sum_probs=113.2
Q ss_pred HHHHHHhhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhh-------------------hhHHHHHHHHHHH
Q 012219 163 QDMIEATEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEEL-------------------ASLESFGNEARLL 223 (468)
Q Consensus 163 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-------------------~~~~~~~~e~~~l 223 (468)
+++......|.+.+.||+|+||.||++...+|+.||||++........ .....+..|..++
T Consensus 8 ~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 87 (198)
T cd05144 8 HTLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL 87 (198)
T ss_pred HHHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence 344444445778899999999999999888899999998765331100 0112366788999
Q ss_pred hhccCC--ceeeEEEEEeeCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC
Q 012219 224 SQIRHR--NIVKLYGFCLHRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDI 301 (468)
Q Consensus 224 ~~l~h~--niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dl 301 (468)
..+.|+ .+...++. ...++||||+++++|...... .....++.+++.++.++| ..+++||||
T Consensus 88 ~~l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~---------~~~~~~~~~i~~~l~~lh---~~gi~H~Dl 151 (198)
T cd05144 88 KALYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL---------EDPEEVLDEILEEIVKAY---KHGIIHGDL 151 (198)
T ss_pred HHHHHcCCCCCceeec----CCceEEEEEeCCcchhhcccc---------ccHHHHHHHHHHHHHHHH---HCCCCcCCC
Confidence 999887 44445443 345899999999998765421 234578899999999999 789999999
Q ss_pred CCCceeeCCCCCeEEeecccccccc
Q 012219 302 SSNNVLLNSELEAFVADFGVARLLN 326 (468)
Q Consensus 302 k~~NIll~~~~~~kl~Dfg~~~~~~ 326 (468)
||+||+++.++.++|+|||.+....
T Consensus 152 ~p~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 152 SEFNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred CcccEEEcCCCcEEEEECCccccCC
Confidence 9999999999999999999996543
No 426
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.77 E-value=3.1e-18 Score=158.31 Aligned_cols=200 Identities=23% Similarity=0.314 Sum_probs=138.6
Q ss_pred cCCceeeEEEEEee---------------------------CCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHH
Q 012219 227 RHRNIVKLYGFCLH---------------------------RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVK 279 (468)
Q Consensus 227 ~h~niv~l~~~~~~---------------------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~ 279 (468)
+|||||++.++|.+ +.+.|+||...+ .+|.+++..+. .+.....-++.
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~----~s~r~~~~~la 348 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRH----RSYRTGRVILA 348 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCC----CchHHHHHHHH
Confidence 59999999887643 346789998775 48999987654 45566677899
Q ss_pred HHHHHHHHHHhcCCCCeEecCCCCCceee--CCCC--CeEEeeccccccccC-----C-CCCceeccccccccccccccC
Q 012219 280 GMCHALSYLHHDCTPPIVHRDISSNNVLL--NSEL--EAFVADFGVARLLNF-----D-SSNRTLLAGTYGYIAPELAYT 349 (468)
Q Consensus 280 ~ia~~l~~LH~~~~~~ivH~dlk~~NIll--~~~~--~~kl~Dfg~~~~~~~-----~-~~~~~~~~g~~~y~aPE~~~~ 349 (468)
|+.+|+.||| .+||.|||+|++|||+ |+|. ...|+|||++-.-.. + .+......|...-||||+...
T Consensus 349 QlLEav~hL~---~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta 425 (598)
T KOG4158|consen 349 QLLEAVTHLH---KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATA 425 (598)
T ss_pred HHHHHHHHHH---HccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhc
Confidence 9999999999 7899999999999998 4444 357899998733211 0 111223467888999999875
Q ss_pred CC------CCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhccc
Q 012219 350 MV------VTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLR 423 (468)
Q Consensus 350 ~~------~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~ 423 (468)
.. .-.|+|.|+.|-+.||+++...||..-......... ..+---|.++...+.. +.+++...++
T Consensus 426 ~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~---Yqe~qLPalp~~vpp~-------~rqlV~~lL~ 495 (598)
T KOG4158|consen 426 VPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRT---YQESQLPALPSRVPPV-------ARQLVFDLLK 495 (598)
T ss_pred CCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhh---hhhhhCCCCcccCChH-------HHHHHHHHhc
Confidence 42 235899999999999999999999753221111110 1111113333333322 5568888999
Q ss_pred CCCCCCCCHHHHHHHHHhcCC
Q 012219 424 SQPKSRPTMQLVSNEFIARNK 444 (468)
Q Consensus 424 ~dP~~RPs~~~v~~~l~~~~~ 444 (468)
.||++||+..-..+.+.-..+
T Consensus 496 r~pskRvsp~iAANvl~LsLw 516 (598)
T KOG4158|consen 496 RDPSKRVSPNIAANVLNLSLW 516 (598)
T ss_pred CCccccCCccHHHhHHHHHHh
Confidence 999999998666655543333
No 427
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.75 E-value=7.5e-18 Score=151.04 Aligned_cols=133 Identities=23% Similarity=0.373 Sum_probs=107.3
Q ss_pred eeeeeCCceEEEEEcCCCCEEEEEEecCcch-----hhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEec
Q 012219 177 CIGTGGYGSVYRARLPSGKVVALKKLHRSET-----EELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYM 251 (468)
Q Consensus 177 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-----~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 251 (468)
.||+|+||.||+|.+ ++..+++|+...... ........+.+|++++..++|+++.....++......+++|||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 389999999999986 578899998654321 11123456788999999999887665555555666678999999
Q ss_pred cCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 252 EMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 252 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
+|++|.+.+..... .++.+++.+|.+|| +.+++|+|++|.||+++ ++.+++.|||+++.
T Consensus 80 ~g~~l~~~~~~~~~----------~~~~~i~~~l~~lH---~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGND----------ELLREIGRLVGKLH---KAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcHH----------HHHHHHHHHHHHHH---HCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999988754211 78999999999999 88999999999999999 78999999998865
No 428
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.75 E-value=3.7e-19 Score=170.86 Aligned_cols=173 Identities=23% Similarity=0.360 Sum_probs=131.3
Q ss_pred EEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccc
Q 012219 243 CMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVA 322 (468)
Q Consensus 243 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~ 322 (468)
..++.|++|..++|.+++.........++...+.++.|++.|+.| ++.+|+|+||.||++..+..+||+|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhhhe
Confidence 468999999999999999877666678889999999999999998 48999999999999999999999999998
Q ss_pred ccccCCC------CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHh-CCCCCCcccccchhhhccccccccc
Q 012219 323 RLLNFDS------SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSSSWSLDKNIKLIDLL 395 (468)
Q Consensus 323 ~~~~~~~------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~~~~~~~~~~~~~~~ 395 (468)
....... ...+...||..||+||.+.+..|+.|+||||+|+|++|+++ -..+++.. ....++-
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~----------~t~~d~r 473 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI----------ATLTDIR 473 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH----------Hhhhhhh
Confidence 7664333 13344679999999999999999999999999999999997 33332211 1111222
Q ss_pred CCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHH
Q 012219 396 DPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLV 435 (468)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v 435 (468)
|..+++.......+ =..++.+++...|.+||++-++
T Consensus 474 ~g~ip~~~~~d~p~----e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 474 DGIIPPEFLQDYPE----EYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred cCCCChHHhhcCcH----HHHHHHHhcCCCcccCchHHHH
Confidence 22233222222222 2246778999999999955443
No 429
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.75 E-value=7.1e-18 Score=173.45 Aligned_cols=141 Identities=21% Similarity=0.305 Sum_probs=112.5
Q ss_pred hhCccccceeeeeCCceEEEEEcCCCCEEEEEE-ecCc-c---hhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCE
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKK-LHRS-E---TEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKC 243 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~-~~~~-~---~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 243 (468)
...|...+.||+|+||.||+|.+.+.. +++|+ .... . .......+.+.+|++++..++|++++....++.....
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 344566789999999999999875544 33333 2211 1 1111234568899999999999999988888877777
Q ss_pred EEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccc
Q 012219 244 MFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVAR 323 (468)
Q Consensus 244 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~ 323 (468)
.++||||+++++|.+++. ....++.+++.+|.+|| +.+++||||||+||++ .++.++|+|||+++
T Consensus 411 ~~lv~E~~~g~~L~~~l~-----------~~~~~~~~i~~~L~~lH---~~giiHrDlkp~NILl-~~~~~~liDFGla~ 475 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE-----------GNPELVRKVGEIVAKLH---KAGIVHGDLTTSNFIV-RDDRLYLIDFGLGK 475 (535)
T ss_pred CEEEEEecCCCcHHHHHH-----------HHHHHHHHHHHHHHHHH---hCCCccCCCChHHEEE-ECCcEEEEeCcccc
Confidence 899999999999998875 34678999999999999 7899999999999999 57899999999997
Q ss_pred cc
Q 012219 324 LL 325 (468)
Q Consensus 324 ~~ 325 (468)
..
T Consensus 476 ~~ 477 (535)
T PRK09605 476 YS 477 (535)
T ss_pred cC
Confidence 53
No 430
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.70 E-value=1.3e-16 Score=141.51 Aligned_cols=139 Identities=21% Similarity=0.212 Sum_probs=99.3
Q ss_pred cceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHH---------------------HHHHHHHHHhhccCCc--e
Q 012219 175 KYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLE---------------------SFGNEARLLSQIRHRN--I 231 (468)
Q Consensus 175 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~---------------------~~~~e~~~l~~l~h~n--i 231 (468)
.+.||+|+||.||+|...+++.||||++............ ....|.+.+..+.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999999888999999998754322111111 1135666666665443 4
Q ss_pred eeEEEEEeeCCEEEEEEEeccCCChhhh-hhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCC-CCeEecCCCCCceeeC
Q 012219 232 VKLYGFCLHRKCMFLIYEYMEMGSLFCV-LRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCT-PPIVHRDISSNNVLLN 309 (468)
Q Consensus 232 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~-~~ivH~dlk~~NIll~ 309 (468)
.+.+++. ..++||||++++.+... +.... .. .+...++.+++.++.++| . .+|+|+||||+||+++
T Consensus 82 ~~~~~~~----~~~lv~e~~~g~~~~~~~l~~~~----~~-~~~~~~~~~~~~~l~~lh---~~~~ivH~Dl~p~Nili~ 149 (187)
T cd05119 82 PKPIDLN----RHVLVMEFIGGDGIPAPRLKDVR----LL-EDPEELYDQILELMRKLY---REAGLVHGDLSEYNILVD 149 (187)
T ss_pred CceEecC----CCEEEEEEeCCCCccChhhhhhh----hc-ccHHHHHHHHHHHHHHHh---hccCcCcCCCChhhEEEE
Confidence 4444432 35899999999654321 11110 11 556789999999999999 5 8999999999999999
Q ss_pred CCCCeEEeecccccccc
Q 012219 310 SELEAFVADFGVARLLN 326 (468)
Q Consensus 310 ~~~~~kl~Dfg~~~~~~ 326 (468)
++.++++|||.+....
T Consensus 150 -~~~~~liDfg~a~~~~ 165 (187)
T cd05119 150 -DGKVYIIDVPQAVEID 165 (187)
T ss_pred -CCcEEEEECccccccc
Confidence 8999999999996553
No 431
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.68 E-value=5.2e-17 Score=166.99 Aligned_cols=207 Identities=24% Similarity=0.307 Sum_probs=136.0
Q ss_pred hCccccceeeeeCCceEEEEEcCC-CCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLPS-GKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
.+|+..+.|..|++|.||.+++++ .+.+|. ++.+...- .+- ++.....|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~-kiNkq~li--------lRn--ilt~a~npfvv---------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAM-KINKQNLI--------LRN--ILTFAGNPFVV---------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhh-cccccchh--------hhc--cccccCCccee----------------
Confidence 578899999999999999998764 566777 33322211 000 22222333333
Q ss_pred EeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCC
Q 012219 249 EYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFD 328 (468)
Q Consensus 249 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~ 328 (468)
|+=...+...+. ++. +++.+++||| +.||+|||+||+|.+++.-|.+|++|||+.+..-..
T Consensus 136 -----gDc~tllk~~g~---lPv--------dmvla~Eylh---~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms 196 (1205)
T KOG0606|consen 136 -----GDCATLLKNIGP---LPV--------DMVLAVEYLH---SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMS 196 (1205)
T ss_pred -----chhhhhcccCCC---Ccc--------hhhHHhHhhc---cCCeecCCCCCCcceeeecccccccchhhhhhhhhh
Confidence 333333332211 222 2277899999 899999999999999999999999999998765211
Q ss_pred CC---------------CceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhccccccc
Q 012219 329 SS---------------NRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLID 393 (468)
Q Consensus 329 ~~---------------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~ 393 (468)
.. .....+||+.|.|||++....|...+|.|++|+|+||.+-|..||.........-.-......
T Consensus 197 ~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~ 276 (1205)
T KOG0606|consen 197 LATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIE 276 (1205)
T ss_pred ccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhcc
Confidence 10 112357999999999999999999999999999999999999998754322111000001111
Q ss_pred ccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCC
Q 012219 394 LLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPT 431 (468)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs 431 (468)
..+. ..... .+...++.+.++.+|..|--
T Consensus 277 wpE~--dea~p-------~Ea~dli~~LL~qnp~~Rlg 305 (1205)
T KOG0606|consen 277 WPEE--DEALP-------PEAQDLIEQLLRQNPLCRLG 305 (1205)
T ss_pred cccc--CcCCC-------HHHHHHHHHHHHhChHhhcc
Confidence 1111 11111 12556777889999999953
No 432
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.67 E-value=7.1e-16 Score=131.44 Aligned_cols=135 Identities=17% Similarity=0.141 Sum_probs=113.1
Q ss_pred ccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccC--CceeeEEEEEeeCCEEEEEEEec
Q 012219 174 IKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRH--RNIVKLYGFCLHRKCMFLIYEYM 251 (468)
Q Consensus 174 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~ 251 (468)
+.+.||+|.++.||++...+ ..+++|....... ...+..|+..+..++| .++.+++++....+..++++||+
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~-----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~ 75 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK-----GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWI 75 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc-----hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEec
Confidence 35679999999999999854 7899999866543 2467889999999976 58999999888878899999999
Q ss_pred cCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 252 EMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 252 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
+++.+..+ +......++.+++++++++|.....+++|+|++|+||+++.++.+++.|||.++.
T Consensus 76 ~g~~~~~~----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 76 EGETLDEV----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred CCeecccC----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 98777544 4456677899999999999954446899999999999999989999999998864
No 433
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.65 E-value=2e-15 Score=138.43 Aligned_cols=139 Identities=19% Similarity=0.264 Sum_probs=106.1
Q ss_pred cceee-eeCCceEEEEEcCCCCEEEEEEecCcch----------hhhhhHHHHHHHHHHHhhccCCce--eeEEEEEeeC
Q 012219 175 KYCIG-TGGYGSVYRARLPSGKVVALKKLHRSET----------EELASLESFGNEARLLSQIRHRNI--VKLYGFCLHR 241 (468)
Q Consensus 175 ~~~lg-~G~~g~Vy~~~~~~~~~vavK~~~~~~~----------~~~~~~~~~~~e~~~l~~l~h~ni--v~l~~~~~~~ 241 (468)
...|| .|+.|+||.+... +..++||.+..... ........+.+|++++.+++|+++ +..+++....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 35688 8999999999884 67889998864321 001223567889999999998875 6677765432
Q ss_pred C----EEEEEEEeccC-CChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEE
Q 012219 242 K----CMFLIYEYMEM-GSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFV 316 (468)
Q Consensus 242 ~----~~~lv~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl 316 (468)
. ..++|+|++++ .+|.+++... .++.. .+.+++.++.+|| ..||+||||||.|||++.++.++|
T Consensus 115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~----~l~~~----~~~~i~~~l~~lH---~~GI~HrDlkp~NILv~~~~~v~L 183 (239)
T PRK01723 115 HGLFYRADILIERIEGARDLVALLQEA----PLSEE----QWQAIGQLIARFH---DAGVYHADLNAHNILLDPDGKFWL 183 (239)
T ss_pred cCcceeeeEEEEecCCCCCHHHHHhcC----CCCHH----HHHHHHHHHHHHH---HCCCCCCCCCchhEEEcCCCCEEE
Confidence 2 23599999997 6898887542 23433 3568999999999 889999999999999999999999
Q ss_pred eeccccccc
Q 012219 317 ADFGVARLL 325 (468)
Q Consensus 317 ~Dfg~~~~~ 325 (468)
+|||.++..
T Consensus 184 IDfg~~~~~ 192 (239)
T PRK01723 184 IDFDRGELR 192 (239)
T ss_pred EECCCcccC
Confidence 999988653
No 434
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.60 E-value=1.5e-16 Score=163.24 Aligned_cols=255 Identities=22% Similarity=0.298 Sum_probs=182.5
Q ss_pred hCccccceeeeeCCceEEEEEcC--CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CCceeeEEEEEeeCCEEEE
Q 012219 170 EDFHIKYCIGTGGYGSVYRARLP--SGKVVALKKLHRSETEELASLESFGNEARLLSQIR-HRNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 170 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~l 246 (468)
..|.....||+|+|+.|-..... ....+|+|.+.... ...........|..+-..+. |+|++.+++...+.+..++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~-~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP-KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCC-CccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 34667777999999999888653 34456666665443 11122334445777777776 9999999999999999999
Q ss_pred EEEeccCCChhhhh-hcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC-CeEEeecccccc
Q 012219 247 IYEYMEMGSLFCVL-RTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSEL-EAFVADFGVARL 324 (468)
Q Consensus 247 v~e~~~~gsL~~~l-~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~-~~kl~Dfg~~~~ 324 (468)
+.+|..++++.+.+ +.... ..+....-..+.|+..++.|+|. ..++.|+|+||+|.+++..+ ..+++|||+|..
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~--~~~~~~~~~~~~ql~s~l~~~H~--~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~ 174 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDST--GTSSSSASRYLPQLNSGLSYLHP--ENGVTHRDIKPSNSLLDESGSALKIADFGLATA 174 (601)
T ss_pred ccCcccccccccccccCCcc--CCCCcchhhhhhhhccCccccCc--ccccccCCCCCccchhccCCCcccCCCchhhcc
Confidence 99999999999888 43321 24555666789999999999995 45899999999999999999 999999999987
Q ss_pred ccC-CCC--Cceeccc-cccccccccccCC-CCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCC
Q 012219 325 LNF-DSS--NRTLLAG-TYGYIAPELAYTM-VVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRL 399 (468)
Q Consensus 325 ~~~-~~~--~~~~~~g-~~~y~aPE~~~~~-~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (468)
+.. .+. .....+| ++.|+|||...+. ......|+||.|+++.-+++|..|++....................
T Consensus 175 ~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--- 251 (601)
T KOG0590|consen 175 YRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFT--- 251 (601)
T ss_pred ccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccc---
Confidence 754 222 2233567 9999999998884 4567899999999999999999998754433222111111110000
Q ss_pred CCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHH
Q 012219 400 SPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVS 436 (468)
Q Consensus 400 ~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~ 436 (468)
..+ ...... ...++..+++..+|+.|.+.+++.
T Consensus 252 ~~~-~~~~~~---~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 252 QLP-WNSISD---QAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred cCc-cccCCh---hhhhcccccccCCchhcccccccc
Confidence 111 111111 145577788889999999988776
No 435
>PLN03150 hypothetical protein; Provisional
Probab=99.56 E-value=6.2e-15 Score=153.40 Aligned_cols=70 Identities=33% Similarity=0.615 Sum_probs=38.4
Q ss_pred CCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcC
Q 012219 3 CSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESV 72 (468)
Q Consensus 3 l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~ 72 (468)
|++|+.|+|++|+|+|.+|+.+++|++|+.|+|++|+|+|.+|..+++|++|+.|+|++|+|+|.+|..+
T Consensus 441 L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l 510 (623)
T PLN03150 441 LRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAAL 510 (623)
T ss_pred CCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHH
Confidence 4455555555555555555555555555555555555555555555555555555555555555555543
No 436
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.55 E-value=3.4e-14 Score=141.49 Aligned_cols=144 Identities=22% Similarity=0.247 Sum_probs=102.1
Q ss_pred cceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhh-------------------------------------hHHHHH
Q 012219 175 KYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELA-------------------------------------SLESFG 217 (468)
Q Consensus 175 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~-------------------------------------~~~~~~ 217 (468)
.+.||.|++|.||+|++.+|+.||||+.+........ ..-+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 3679999999999999999999999998754321110 001355
Q ss_pred HHHHHHhhcc----CCceeeEEEEEe-eCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHH-HHHHHHhc
Q 012219 218 NEARLLSQIR----HRNIVKLYGFCL-HRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCH-ALSYLHHD 291 (468)
Q Consensus 218 ~e~~~l~~l~----h~niv~l~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~-~l~~LH~~ 291 (468)
+|.+.+.+++ |.+-+.+-.++. .....++||||++|++|.+........ . .+..++..++. .+..+|
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~--~---~~~~ia~~~~~~~l~ql~-- 274 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAG--L---DRKALAENLARSFLNQVL-- 274 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcC--C---CHHHHHHHHHHHHHHHHH--
Confidence 6666666653 333333333332 234579999999999998876532111 2 23456666665 467788
Q ss_pred CCCCeEecCCCCCceeeCCCCCeEEeecccccccc
Q 012219 292 CTPPIVHRDISSNNVLLNSELEAFVADFGVARLLN 326 (468)
Q Consensus 292 ~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 326 (468)
..|++|+|++|.||+++.++.+++.|||++..+.
T Consensus 275 -~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 275 -RDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred -hCCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 7799999999999999999999999999997764
No 437
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.51 E-value=3e-14 Score=129.17 Aligned_cols=203 Identities=23% Similarity=0.331 Sum_probs=137.8
Q ss_pred HHHHhhccCCceeeEEEEEeeC-----CEEEEEEEeccCCChhhhhhcCcc-cCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 012219 220 ARLLSQIRHRNIVKLYGFCLHR-----KCMFLIYEYMEMGSLFCVLRTDEE-AVGLDWAKRVNVVKGMCHALSYLHHDCT 293 (468)
Q Consensus 220 ~~~l~~l~h~niv~l~~~~~~~-----~~~~lv~e~~~~gsL~~~l~~~~~-~~~l~~~~~~~i~~~ia~~l~~LH~~~~ 293 (468)
...+-++-|.|||++..|+.+. .....+.|||..|++..+|++... ...+......+++-||..||.|||.. .
T Consensus 118 FdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~ 196 (458)
T KOG1266|consen 118 FDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-D 196 (458)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-C
Confidence 3455667899999998887653 346889999999999999986432 23355666678999999999999974 8
Q ss_pred CCeEecCCCCCceeeCCCCCeEEeeccccccccC-----CCCCceeccccccccccccccCCCCCccchhhHHHHHHHHH
Q 012219 294 PPIVHRDISSNNVLLNSELEAFVADFGVARLLNF-----DSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEV 368 (468)
Q Consensus 294 ~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~-----~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el 368 (468)
+.|+|+++.-+-|++..++-+|++-- -...... .........+-++|.|||+-.....+.++|||+||...+||
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~~-ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlem 275 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGSV-APDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEM 275 (458)
T ss_pred CccccCCcchhheeecCCceEEeccc-CccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHH
Confidence 99999999999999999998887421 1111100 00111123457899999998888888999999999999999
Q ss_pred HhCCCC-CCcccccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 369 LMGKHP-GELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 369 ~tg~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
..+..- ...... .... ..+...+ ..+.... =..++.+|++..|..||+|++++.+.
T Consensus 276 ailEiq~tnseS~--~~~e--e~ia~~i-~~len~l----------qr~~i~kcl~~eP~~rp~ar~llfHp 332 (458)
T KOG1266|consen 276 AILEIQSTNSESK--VEVE--ENIANVI-IGLENGL----------QRGSITKCLEGEPNGRPDARLLLFHP 332 (458)
T ss_pred HHheeccCCCcce--eehh--hhhhhhe-eeccCcc----------ccCcCcccccCCCCCCcchhhhhcCc
Confidence 877643 211110 0010 0000000 0000000 11256689999999999999887543
No 438
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.47 E-value=6.8e-14 Score=137.43 Aligned_cols=250 Identities=25% Similarity=0.257 Sum_probs=177.2
Q ss_pred Cccccceeee--eCCceEEEEEc---CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CCceeeEEEEEeeCCEE
Q 012219 171 DFHIKYCIGT--GGYGSVYRARL---PSGKVVALKKLHRSETEELASLESFGNEARLLSQIR-HRNIVKLYGFCLHRKCM 244 (468)
Q Consensus 171 ~~~~~~~lg~--G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~ 244 (468)
.|.....+|. |.+|.||.++. .++..+|+|+-+........ ...=.+|+.....++ |+|.++....+...+..
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~-~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~l 193 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLD-SKRKLREFLSHHKIDSHENPVRDSPAWEGSGIL 193 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccc-cccccchhhcccccCccccccccCcccccCCcc
Confidence 4666788999 99999999975 46788999985433221111 112235666666664 99999988888888899
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHH----HHHHHHhcCCCCeEecCCCCCceeeCCC-CCeEEeec
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCH----ALSYLHHDCTPPIVHRDISSNNVLLNSE-LEAFVADF 319 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~----~l~~LH~~~~~~ivH~dlk~~NIll~~~-~~~kl~Df 319 (468)
++-+|++. .+|..+.+..... ++....+....+..+ |+.++| +..++|-|+||.||+...+ ..++++||
T Consensus 194 fiqtE~~~-~sl~~~~~~~~~~--~p~~~l~~~~~~~~~~~~~al~~~h---s~~~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 194 FIQTELCG-ESLQSYCHTPCNF--LPDNLLWNSLRDWLSRDVTALSHLH---SNNIVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred eeeecccc-chhHHhhhccccc--CCchhhhhHHhhhhhcccccccccC---CCcccccccchhheecccccceeecCCc
Confidence 99999985 6888777654332 556677777888888 999999 8899999999999999999 88999999
Q ss_pred cccccccCCCCCcee-----ccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccc
Q 012219 320 GVARLLNFDSSNRTL-----LAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDL 394 (468)
Q Consensus 320 g~~~~~~~~~~~~~~-----~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 394 (468)
|+...+....-.... ..|...|++||...+ -++..+|||++|.++.+-.+|..+....-...|...+...
T Consensus 268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~---- 342 (524)
T KOG0601|consen 268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY---- 342 (524)
T ss_pred ceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc----
Confidence 999887644322222 257788999997644 4778999999999999999988775433223333222111
Q ss_pred cCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHH
Q 012219 395 LDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEF 439 (468)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l 439 (468)
+...+.... ...+...+..+++.+|-.|++.+.+.+.-
T Consensus 343 ip~e~~~~~-------s~~l~~~~~~~~d~~~~~~~~~q~~~~l~ 380 (524)
T KOG0601|consen 343 IPLEFCEGG-------SSSLRSVTSQMLDEDPRLRLTAQILTALN 380 (524)
T ss_pred CchhhhcCc-------chhhhhHHHHhcCcchhhhhHHHHHhccc
Confidence 001111111 11144477789999999999998887543
No 439
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.39 E-value=3.5e-12 Score=126.65 Aligned_cols=169 Identities=19% Similarity=0.179 Sum_probs=128.4
Q ss_pred EcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEeccCCChhhhhhcCcccCCC
Q 012219 190 RLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYMEMGSLFCVLRTDEEAVGL 269 (468)
Q Consensus 190 ~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l 269 (468)
+..++.+|.|...+.... .......+.++.++.++||||+++++.+...+..|+|+|-+. .|..++...
T Consensus 33 ~k~~~~~vsVF~~~~~~~---~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l------ 101 (690)
T KOG1243|consen 33 RKADGGPVSVFVYKRSNG---EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKEL------ 101 (690)
T ss_pred eeccCCceEEEEEeCCCc---hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHh------
Confidence 445788899988876654 233456678899999999999999999999999999999985 677777652
Q ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCceeccccccccccccccC
Q 012219 270 DWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRTLLAGTYGYIAPELAYT 349 (468)
Q Consensus 270 ~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~ 349 (468)
........+.||+.||.|||+ ..+++|++|.-..|+++..|..||++|-++..............--..|..|+....
T Consensus 102 ~~~~v~~Gl~qIl~AL~FL~~--d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~ 179 (690)
T KOG1243|consen 102 GKEEVCLGLFQILAALSFLND--DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDP 179 (690)
T ss_pred HHHHHHHHHHHHHHHHHHHhc--cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCc
Confidence 345566778999999999996 558999999999999999999999999988654322211111122234666665433
Q ss_pred CCCCccchhhHHHHHHHHHHhCCC
Q 012219 350 MVVTEKCDVYSFGVVALEVLMGKH 373 (468)
Q Consensus 350 ~~~~~~~Dv~s~Gvil~el~tg~~ 373 (468)
.. -..|.|-|||+++|++.|..
T Consensus 180 s~--~s~D~~~Lg~li~el~ng~~ 201 (690)
T KOG1243|consen 180 SE--WSIDSWGLGCLIEELFNGSL 201 (690)
T ss_pred cc--cchhhhhHHHHHHHHhCccc
Confidence 32 24699999999999999943
No 440
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.39 E-value=1.8e-12 Score=130.66 Aligned_cols=149 Identities=19% Similarity=0.211 Sum_probs=96.9
Q ss_pred hhCccccceeeeeCCceEEEEEcCC-CCEEEEEEecCcchhhh-------------------------------------
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPS-GKVVALKKLHRSETEEL------------------------------------- 210 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~------------------------------------- 210 (468)
..+|+. +.||+|++|.||+|++++ |+.||||+.+.......
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 345766 789999999999999887 99999999975421110
Q ss_pred hhHHHHHHHHHHHhhcc----CCceeeEEEEEee-CCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHH-H
Q 012219 211 ASLESFGNEARLLSQIR----HRNIVKLYGFCLH-RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCH-A 284 (468)
Q Consensus 211 ~~~~~~~~e~~~l~~l~----h~niv~l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~-~ 284 (468)
...-+|.+|+..+.+++ +.+.+.+-.++.+ ....+|||||++|+.+.+.-.-... ..+.. .++...+. -
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~--g~d~~---~la~~~v~~~ 272 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAA--GTDMK---LLAERGVEVF 272 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhc--CCCHH---HHHHHHHHHH
Confidence 00013555665555553 4444554444433 4557899999999999774221111 12211 12222111 1
Q ss_pred HHHHHhcCCCCeEecCCCCCceeeCCCC----CeEEeecccccccc
Q 012219 285 LSYLHHDCTPPIVHRDISSNNVLLNSEL----EAFVADFGVARLLN 326 (468)
Q Consensus 285 l~~LH~~~~~~ivH~dlk~~NIll~~~~----~~kl~Dfg~~~~~~ 326 (468)
+..+. ..|++|+|+||.||+++.++ .+++.|||++..++
T Consensus 273 ~~Qif---~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 273 FTQVF---RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred HHHHH---hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 22233 56999999999999999988 99999999987764
No 441
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.37 E-value=2.4e-12 Score=112.06 Aligned_cols=130 Identities=22% Similarity=0.209 Sum_probs=94.1
Q ss_pred ceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCcee-eEEEEEeeCCEEEEEEEeccCC
Q 012219 176 YCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIV-KLYGFCLHRKCMFLIYEYMEMG 254 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~~~g 254 (468)
+.++.|.++.||+++.. ++.+++|........ ...+..|++.+..+.+.+++ +++.+.. ...++||||++|.
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~~----~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~ 76 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTEL----LINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGS 76 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCccc----ccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCC
Confidence 56889999999999874 778999998654321 12456889999888665544 4554433 2357999999998
Q ss_pred ChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 255 SLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDC--TPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 255 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~--~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
++.+.- . ....++.+++++|+.||... ..+++|+|++|.||+++ ++.+++.|||.+..
T Consensus 77 ~l~~~~--------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 77 ELLTED--------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cccccc--------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 875430 0 11245678999999999432 12369999999999999 66899999998753
No 442
>PLN03150 hypothetical protein; Provisional
Probab=99.29 E-value=3e-12 Score=133.39 Aligned_cols=88 Identities=40% Similarity=0.615 Sum_probs=81.3
Q ss_pred CCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcCC---Cccceecc
Q 012219 5 KLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESVR---KVPHLYVY 81 (468)
Q Consensus 5 ~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~---~l~~l~~~ 81 (468)
.++.|+|++|.|+|.+|..++.|++|+.|+|++|+|+|.+|..+++|++|+.|+|++|+|+|.+|..++ +|+.|+++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 378899999999999999999999999999999999999999999999999999999999999998654 56668899
Q ss_pred cccccccCCCC
Q 012219 82 GKNFDVEIPNT 92 (468)
Q Consensus 82 ~n~l~~~~p~~ 92 (468)
+|++.+.+|..
T Consensus 499 ~N~l~g~iP~~ 509 (623)
T PLN03150 499 GNSLSGRVPAA 509 (623)
T ss_pred CCcccccCChH
Confidence 99999988864
No 443
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.29 E-value=5.8e-11 Score=104.14 Aligned_cols=140 Identities=19% Similarity=0.188 Sum_probs=98.1
Q ss_pred cceeeeeCCceEEEEEcCC-------CCEEEEEEecCcchh-------------------hhhhHHHHH----HHHHHHh
Q 012219 175 KYCIGTGGYGSVYRARLPS-------GKVVALKKLHRSETE-------------------ELASLESFG----NEARLLS 224 (468)
Q Consensus 175 ~~~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~~-------------------~~~~~~~~~----~e~~~l~ 224 (468)
...||.|--+.||.|...+ +..+|||+.+..... .....+.+. +|++.|.
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 3568999999999997543 578999988632100 001122333 7999999
Q ss_pred hccC--CceeeEEEEEeeCCEEEEEEEeccCCChhh-hhhcCcccCCCCHHHHHHHHHHHHHHHHHH-HhcCCCCeEecC
Q 012219 225 QIRH--RNIVKLYGFCLHRKCMFLIYEYMEMGSLFC-VLRTDEEAVGLDWAKRVNVVKGMCHALSYL-HHDCTPPIVHRD 300 (468)
Q Consensus 225 ~l~h--~niv~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~l~~~~~~~i~~~ia~~l~~L-H~~~~~~ivH~d 300 (468)
++.. -++..++++ ...++||||+.++.+.. .+.. ..++..+...+..+++.++..| | ..+++|||
T Consensus 82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd----~~~~~~~~~~i~~~i~~~l~~l~H---~~glVHGD 150 (197)
T cd05146 82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKD----AKLNDEEMKNAYYQVLSMMKQLYK---ECNLVHAD 150 (197)
T ss_pred HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhc----cccCHHHHHHHHHHHHHHHHHHHH---hCCeecCC
Confidence 8853 455566654 34589999997654422 2221 1244455667889999999999 6 77999999
Q ss_pred CCCCceeeCCCCCeEEeecccccccc
Q 012219 301 ISSNNVLLNSELEAFVADFGVARLLN 326 (468)
Q Consensus 301 lk~~NIll~~~~~~kl~Dfg~~~~~~ 326 (468)
|++.||++++ +.+.|+|||.+....
T Consensus 151 Ls~~NIL~~~-~~v~iIDF~qav~~~ 175 (197)
T cd05146 151 LSEYNMLWHD-GKVWFIDVSQSVEPT 175 (197)
T ss_pred CCHHHEEEEC-CcEEEEECCCceeCC
Confidence 9999999974 679999999886553
No 444
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.29 E-value=2.3e-12 Score=126.75 Aligned_cols=248 Identities=20% Similarity=0.196 Sum_probs=171.5
Q ss_pred HhhCccccceeeeeCCceEEEEEc--CCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEEeeCCEE
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARL--PSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFCLHRKCM 244 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 244 (468)
.+.+|.....||.|.|+.|++... .++..+++|.+...-......+.. ..|+-+...+ .|.+++..+..+...+..
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~s-l~ev~l~~~l~~~~~~~g~~~~W~~~r~~ 341 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFS-LGEVILEAILGSHLPSVGKNSSWSQLRQG 341 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcc-hhhhhHhhHhhcccccCCCCCCccccccc
Confidence 456789999999999999999853 478889999887655443322222 2455555555 488888877766666677
Q ss_pred EEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCC-CCeEEeeccccc
Q 012219 245 FLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSE-LEAFVADFGVAR 323 (468)
Q Consensus 245 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~-~~~kl~Dfg~~~ 323 (468)
++--||++++++....... ..++...++++..|++.++.++| ++.++|+|+||+||++..+ +..+++|||.+.
T Consensus 342 ~ip~e~~~~~s~~l~~~~~---~~~d~~~~~~~~~q~~~~l~~i~---s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t 415 (524)
T KOG0601|consen 342 YIPLEFCEGGSSSLRSVTS---QMLDEDPRLRLTAQILTALNVIH---SKLFVHLDVKPSNILISNDGFFSKLGDFGCWT 415 (524)
T ss_pred cCchhhhcCcchhhhhHHH---HhcCcchhhhhHHHHHhcccccc---chhhhcccccccceeeccchhhhhcccccccc
Confidence 7999999999987666322 23677788999999999999999 8999999999999999887 788999999986
Q ss_pred cccCCCCCceecccccccc--ccccccCCCCCccchhhHHHHHHHHHHhCCCCCCcccccchhhhcccccccccCCCCCC
Q 012219 324 LLNFDSSNRTLLAGTYGYI--APELAYTMVVTEKCDVYSFGVVALEVLMGKHPGELLSSSSWSLDKNIKLIDLLDPRLSP 401 (468)
Q Consensus 324 ~~~~~~~~~~~~~g~~~y~--aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (468)
.+... .....+.-++. +|+......+..+.|+||||.-+.|..+|..--..... | ..+..-.-+....
T Consensus 416 ~~~~~---~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~--~-----~~i~~~~~p~~~~ 485 (524)
T KOG0601|consen 416 RLAFS---SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ--S-----LTIRSGDTPNLPG 485 (524)
T ss_pred cccee---cccccccccccccchhhccccccccccccccccccccccccCcccCccccc--c-----eeeecccccCCCc
Confidence 43211 11122333344 55555566788999999999999999998754221111 1 1111111111111
Q ss_pred ccchhHHHHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Q 012219 402 PVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQLVSNEFI 440 (468)
Q Consensus 402 ~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~~v~~~l~ 440 (468)
.. ..+..+...+..+++..||.+.++..+..
T Consensus 486 ----~~----~~~q~~~kv~~~~~~~~~~l~~~l~~~~~ 516 (524)
T KOG0601|consen 486 ----LK----LQLQVLLKVMINPDRKRRPSAVELSLHSE 516 (524)
T ss_pred ----hH----HhhhhhhhhhcCCccccchhhhhhcccch
Confidence 11 11445666789999999999988775543
No 445
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.24 E-value=9.6e-11 Score=99.16 Aligned_cols=133 Identities=22% Similarity=0.338 Sum_probs=98.1
Q ss_pred eeeeeCCceEEEEEcCCCCEEEEEEec-C----cchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEEEec
Q 012219 177 CIGTGGYGSVYRARLPSGKVVALKKLH-R----SETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIYEYM 251 (468)
Q Consensus 177 ~lg~G~~g~Vy~~~~~~~~~vavK~~~-~----~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 251 (468)
.+++|+-+.+|.+.+.+.. +++|.-. + ......-....-.+|++++.+++--.|...+=|..++....|+|||+
T Consensus 3 ~i~~GAEa~i~~~~~~g~~-av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I 81 (204)
T COG3642 3 LIKQGAEAIIYLTDFLGLP-AVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYI 81 (204)
T ss_pred hhhCCcceeEEeeeccCcc-eEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEe
Confidence 4788999999999774433 5555332 1 11122222345678999999887655555555666777788999999
Q ss_pred cCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccc
Q 012219 252 EMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 252 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
+|..|.+.+... ...++..+-.-+.-|| ..||+|+||.++||++..+. +.++|||++.+
T Consensus 82 ~G~~lkd~l~~~----------~~~~~r~vG~~vg~lH---~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 82 EGELLKDALEEA----------RPDLLREVGRLVGKLH---KAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred CChhHHHHHHhc----------chHHHHHHHHHHHHHH---hcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 999999888754 2446666777788899 88999999999999999876 88999999965
No 446
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.22 E-value=1.2e-10 Score=106.14 Aligned_cols=143 Identities=21% Similarity=0.253 Sum_probs=108.7
Q ss_pred ceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccC--CceeeEEEEEeeCC---EEEEEEEe
Q 012219 176 YCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRH--RNIVKLYGFCLHRK---CMFLIYEY 250 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~---~~~lv~e~ 250 (468)
+.|+.|..+.||++...+|+.+++|........ .....+..|.++++.+++ .++.+++.++.... ..++||||
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~--~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~ 81 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL--PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMER 81 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccC--cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEE
Confidence 458999999999998877789999998654331 123467789999999976 34567777776543 56899999
Q ss_pred ccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------
Q 012219 251 MEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDC-------------------------------------- 292 (468)
Q Consensus 251 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~-------------------------------------- 292 (468)
++|+++.+.+.. ..++..+...++.+++++|..||+..
T Consensus 82 i~G~~l~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (223)
T cd05154 82 VDGRVLRDRLLR----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAM 157 (223)
T ss_pred eCCEecCCCCCC----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHH
Confidence 999888776532 12566777778888888888888421
Q ss_pred ---------------CCCeEecCCCCCceeeCC--CCCeEEeecccccc
Q 012219 293 ---------------TPPIVHRDISSNNVLLNS--ELEAFVADFGVARL 324 (468)
Q Consensus 293 ---------------~~~ivH~dlk~~NIll~~--~~~~kl~Dfg~~~~ 324 (468)
...++|+|+.|.||+++. ++.+.|.||+.+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 158 ERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 246799999999999998 66688999998754
No 447
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.16 E-value=6.4e-10 Score=93.72 Aligned_cols=146 Identities=19% Similarity=0.246 Sum_probs=104.3
Q ss_pred ccceeeeeCCceEEEEEcCCCCEEEEEEe-----cCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEEEE
Q 012219 174 IKYCIGTGGYGSVYRARLPSGKVVALKKL-----HRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFLIY 248 (468)
Q Consensus 174 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~-----~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 248 (468)
....+-+|+-+.|+++.+ .|+...||.- ........-..+...+|++.+.+++--.|....-++.+...-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 456789999999999998 4666666533 2222222233456778999999887555554445566666678999
Q ss_pred EeccC-CChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCC---CeEEeecccccc
Q 012219 249 EYMEM-GSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSEL---EAFVADFGVARL 324 (468)
Q Consensus 249 e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~---~~kl~Dfg~~~~ 324 (468)
||+++ .++.+++......... ......++..|-+.+.-|| ..+|+||||..+||++..++ .+.+.|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~-d~~~~~~~~~iG~~igklH---~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESE-DEGLAELARRIGELIGKLH---DNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCccc-chhHHHHHHHHHHHHHHhh---hCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99987 4778887665433222 2223678888999999999 78999999999999996654 347999999854
No 448
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.15 E-value=5.1e-11 Score=132.22 Aligned_cols=92 Identities=34% Similarity=0.544 Sum_probs=82.7
Q ss_pred CCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcCC---Ccccee
Q 012219 3 CSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESVR---KVPHLY 79 (468)
Q Consensus 3 l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~---~l~~l~ 79 (468)
+++|+.|+|++|+++|.+|..|.++++|+.|+|++|+++|.+|..+.+|++|+.|+|++|+++|.+|..+. +|..|+
T Consensus 474 ~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 553 (968)
T PLN00113 474 SKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLD 553 (968)
T ss_pred cccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEE
Confidence 35788999999999999999999999999999999999999999999999999999999999999998654 566688
Q ss_pred cccccccccCCCCCC
Q 012219 80 VYGKNFDVEIPNTSE 94 (468)
Q Consensus 80 ~~~n~l~~~~p~~~~ 94 (468)
+++|++++.+|....
T Consensus 554 Ls~N~l~~~~p~~l~ 568 (968)
T PLN00113 554 LSQNQLSGEIPKNLG 568 (968)
T ss_pred CCCCcccccCChhHh
Confidence 999999998886543
No 449
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=99.15 E-value=2.8e-11 Score=85.67 Aligned_cols=60 Identities=35% Similarity=0.565 Sum_probs=54.8
Q ss_pred CCCcEEEccCCcccccCC-cccccCCCCCEeeccCccccccccccccCCCCCceecccCccc
Q 012219 4 SKLRVLELGNNLLSGSIP-SEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNL 64 (468)
Q Consensus 4 ~~l~~l~l~~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l 64 (468)
|+|+.|+|++|+|+ .+| ..|.++++|++|+|++|++++.-|..|.+|++|+.|++++|+|
T Consensus 1 p~L~~L~l~~n~l~-~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLT-EIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTES-EECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCC-ccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 68999999999999 555 6789999999999999999977777899999999999999986
No 450
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.07 E-value=2.6e-11 Score=125.67 Aligned_cols=251 Identities=20% Similarity=0.231 Sum_probs=161.2
Q ss_pred HhhCccccceeeeeCCceEEEEEcC-CCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEeeCCEEEE
Q 012219 168 ATEDFHIKYCIGTGGYGSVYRARLP-SGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCLHRKCMFL 246 (468)
Q Consensus 168 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 246 (468)
..+.+.+.+.+-+|.++.++.+.-. .|...+.|+......-.....+....+-.+.-..+||-+++..-.+.......|
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 3456777778889999999887532 343334443332211111111222222223333445666655444445566899
Q ss_pred EEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeecccccccc
Q 012219 247 IYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLN 326 (468)
Q Consensus 247 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 326 (468)
+++|..+++|...++.... .+..-.......+.++++||| +..+.|+|++|.|.+...++..+++|||......
T Consensus 882 ~~~~~~~~~~~Skl~~~~~---~saepaRs~i~~~vqs~e~L~---s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg 955 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSGC---LSAEPARSPILERVQSLESLH---SSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVG 955 (1205)
T ss_pred hhHHhccCCchhhhhcCCC---cccccccchhHHHHhhhhccc---cchhhcccccccchhhcccCCcccCccccccccc
Confidence 9999999999999886542 343444455666788999999 6679999999999999999999999998433221
Q ss_pred CC-----C--------------------------CCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCC
Q 012219 327 FD-----S--------------------------SNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPG 375 (468)
Q Consensus 327 ~~-----~--------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 375 (468)
.- . .......+|+.|.+||...+......+|.|+.|++++|.++|..||
T Consensus 956 ~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~ 1035 (1205)
T KOG0606|consen 956 LIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPF 1035 (1205)
T ss_pred cccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCC
Confidence 00 0 0112246899999999999999999999999999999999999998
Q ss_pred CcccccchhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCCCCCCCHH
Q 012219 376 ELLSSSSWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQPKSRPTMQ 433 (468)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP~~RPs~~ 433 (468)
......... .. ++......+ ....+......+++...+..+|.+|-.|.
T Consensus 1036 na~tpq~~f----~n---i~~~~~~~p--~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1036 NAETPQQIF----EN---ILNRDIPWP--EGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCcchhhhh----hc---cccCCCCCC--CCccccChhhhhhhhhhhccCchhccCcc
Confidence 754432111 11 111111111 11111222355677778889999998775
No 451
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.03 E-value=3.5e-09 Score=92.59 Aligned_cols=129 Identities=26% Similarity=0.350 Sum_probs=82.4
Q ss_pred eEEEEEcCCCCEEEEEEecCcchh-----------------------hhhhHHHHHHHHHHHhhccCC--ceeeEEEEEe
Q 012219 185 SVYRARLPSGKVVALKKLHRSETE-----------------------ELASLESFGNEARLLSQIRHR--NIVKLYGFCL 239 (468)
Q Consensus 185 ~Vy~~~~~~~~~vavK~~~~~~~~-----------------------~~~~~~~~~~e~~~l~~l~h~--niv~l~~~~~ 239 (468)
.||.|...+|..+|||..+..... .........+|.+.|.++..- ++.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 389999889999999988632110 001234567899999999765 456666553
Q ss_pred eCCEEEEEEEecc--CCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHH-HHhcCCCCeEecCCCCCceeeCCCCCeEE
Q 012219 240 HRKCMFLIYEYME--MGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSY-LHHDCTPPIVHRDISSNNVLLNSELEAFV 316 (468)
Q Consensus 240 ~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~-LH~~~~~~ivH~dlk~~NIll~~~~~~kl 316 (468)
. .++||||++ |..+..+.... ++......++.++...+.. +| ..||+||||.+.||+++++ .+.+
T Consensus 80 -~--~~ivME~I~~~G~~~~~l~~~~-----~~~~~~~~~~~~il~~~~~~~~---~~givHGDLs~~NIlv~~~-~~~i 147 (188)
T PF01163_consen 80 -R--NVIVMEYIGEDGVPLPRLKDVD-----LSPEEPKELLEEILEEIIKMLH---KAGIVHGDLSEYNILVDDG-KVYI 147 (188)
T ss_dssp -T--TEEEEE--EETTEEGGCHHHCG-----GGGSTHHHHHHHHHHHHHHHHH---CTTEEESS-STTSEEEETT-CEEE
T ss_pred -C--CEEEEEecCCCccchhhHHhcc-----ccchhHHHHHHHHHHHHHHHHH---hcCceecCCChhhEEeecc-eEEE
Confidence 2 379999998 55554433322 1123345567777775555 56 7899999999999999988 8999
Q ss_pred eecccccccc
Q 012219 317 ADFGVARLLN 326 (468)
Q Consensus 317 ~Dfg~~~~~~ 326 (468)
+|||.+....
T Consensus 148 IDf~qav~~~ 157 (188)
T PF01163_consen 148 IDFGQAVDSS 157 (188)
T ss_dssp --GTTEEETT
T ss_pred EecCcceecC
Confidence 9999886543
No 452
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=99.01 E-value=7.9e-09 Score=95.91 Aligned_cols=144 Identities=19% Similarity=0.126 Sum_probs=100.4
Q ss_pred ceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhh--------hhHHHHHHHHHHHhhccCCc--eeeEEEEEee-----
Q 012219 176 YCIGTGGYGSVYRARLPSGKVVALKKLHRSETEEL--------ASLESFGNEARLLSQIRHRN--IVKLYGFCLH----- 240 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~--------~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~----- 240 (468)
+.+-+.....|+++.+ +|+.+.||.......... .....+.+|.+.+.++...+ ...++++...
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 3455455556777766 678899997754432110 11124778988888874332 2334555433
Q ss_pred CCEEEEEEEeccCC-ChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC-------CC
Q 012219 241 RKCMFLIYEYMEMG-SLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS-------EL 312 (468)
Q Consensus 241 ~~~~~lv~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~-------~~ 312 (468)
....++|+|++++. +|.+++..... ...+......++.+++..+.-|| ..||+|+|++++|||++. +.
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~-~~~~~~~~~~ll~~la~~i~~LH---~~Gi~HgDL~~~NiLl~~~~~~~~~~~ 182 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWAT-NPPDPRLKRMLIKRVATMVRDMH---AAGINHRDCYICHFLLHLPFPGREEDL 182 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcc-cCCCHHHHHHHHHHHHHHHHHHH---HCcCccCCCChhhEEEeccccCCCCCc
Confidence 23468999999886 78888753211 22455677789999999999999 889999999999999975 46
Q ss_pred CeEEeecccccc
Q 012219 313 EAFVADFGVARL 324 (468)
Q Consensus 313 ~~kl~Dfg~~~~ 324 (468)
.+.++||+.++.
T Consensus 183 ~~~LIDl~r~~~ 194 (268)
T PRK15123 183 KLSVIDLHRAQI 194 (268)
T ss_pred eEEEEECCcccc
Confidence 789999998853
No 453
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.00 E-value=6e-11 Score=98.21 Aligned_cols=83 Identities=29% Similarity=0.540 Sum_probs=75.5
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcCCCccc---e
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESVRKVPH---L 78 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~---l 78 (468)
++++++.|.||+|.++ .+|+.++.|.+|+.|++++|+++ .+|.+++.|++|+.|+++-|++. .+|.+|+.++. |
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levl 107 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVL 107 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhh
Confidence 5677889999999999 99999999999999999999999 89999999999999999999999 89998887765 5
Q ss_pred ecccccccc
Q 012219 79 YVYGKNFDV 87 (468)
Q Consensus 79 ~~~~n~l~~ 87 (468)
++..|+++.
T Consensus 108 dltynnl~e 116 (264)
T KOG0617|consen 108 DLTYNNLNE 116 (264)
T ss_pred hcccccccc
Confidence 677777765
No 454
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=98.96 E-value=6.8e-11 Score=97.87 Aligned_cols=87 Identities=31% Similarity=0.573 Sum_probs=76.6
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCccccc-ccCCcCCCc---cc
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSG-SIPESVRKV---PH 77 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g-~~p~~~~~l---~~ 77 (468)
.|.+|+.|+++||++. .+|.++++|++|+.|+++-|++. .+|..|+.++.|+.|||++|+++- .+|..|.-+ ..
T Consensus 54 ~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlra 131 (264)
T KOG0617|consen 54 ELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRA 131 (264)
T ss_pred Hhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhccccccccccCCcchhHHHHHHH
Confidence 5788999999999999 99999999999999999999999 999999999999999999999974 688876544 45
Q ss_pred eecccccccccCC
Q 012219 78 LYVYGKNFDVEIP 90 (468)
Q Consensus 78 l~~~~n~l~~~~p 90 (468)
|+++.|.|....|
T Consensus 132 lyl~dndfe~lp~ 144 (264)
T KOG0617|consen 132 LYLGDNDFEILPP 144 (264)
T ss_pred HHhcCCCcccCCh
Confidence 7888888866443
No 455
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.92 E-value=1.6e-08 Score=98.10 Aligned_cols=170 Identities=16% Similarity=0.269 Sum_probs=127.0
Q ss_pred CCceEEEEE-cCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceeeEEEEEe----eCCEEEEEEEeccC-CC
Q 012219 182 GYGSVYRAR-LPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVKLYGFCL----HRKCMFLIYEYMEM-GS 255 (468)
Q Consensus 182 ~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~----~~~~~~lv~e~~~~-gs 255 (468)
...+.|++. ..||..+++|+++..+..... .-..-+++++++.|+|+|++.+++. .+...++||+|.++ ++
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~n---k~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~T 364 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTN---KDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPT 364 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcc---cchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCch
Confidence 446779995 458999999999655433211 1124578899999999999988776 35568999999886 56
Q ss_pred hhhhhhcC------------cccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccc
Q 012219 256 LFCVLRTD------------EEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVAR 323 (468)
Q Consensus 256 L~~~l~~~------------~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~ 323 (468)
|.+.-... ......++...|.++.|+..||.++| +.|+.-+-|.+.+|+++.+.+++|+..|...
T Consensus 365 L~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH---ssGLAck~L~~~kIlv~G~~RIriS~C~i~D 441 (655)
T KOG3741|consen 365 LYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH---SSGLACKTLDLKKILVTGKMRIRISGCGIMD 441 (655)
T ss_pred HHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH---hcCceeecccHhHeEeeCcceEEEeccccee
Confidence 76654322 12334678899999999999999999 7799999999999999999999999888776
Q ss_pred cccCCCCCceeccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCC
Q 012219 324 LLNFDSSNRTLLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHP 374 (468)
Q Consensus 324 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p 374 (468)
.+..+.. |-+.+ -.+-|.=.||.+++.|.||..-
T Consensus 442 vl~~d~~--------------~~le~---~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 442 VLQEDPT--------------EPLES---QQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred eecCCCC--------------cchhH---HhhhhHHHHHHHHHHHhhcccc
Confidence 6543320 11111 1356888999999999999543
No 456
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.88 E-value=2.9e-08 Score=93.95 Aligned_cols=253 Identities=17% Similarity=0.182 Sum_probs=152.6
Q ss_pred ccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhc-cCCceeeEEEEE------eeC-CEEE
Q 012219 174 IKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQI-RHRNIVKLYGFC------LHR-KCMF 245 (468)
Q Consensus 174 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~------~~~-~~~~ 245 (468)
....||+|+-+.+|-.-- -...+.|+++.....-.. +.++.|... .||-+-.-+.+= -++ ...-
T Consensus 15 ~gr~LgqGgea~ly~l~e--~~d~VAKIYh~Pppa~~a------qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iG 86 (637)
T COG4248 15 PGRPLGQGGEADLYTLGE--VRDQVAKIYHAPPPAAQA------QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIG 86 (637)
T ss_pred CCccccCCccceeeecch--hhchhheeecCCCchHHH------HHHHHhccCCCCcchhhhhcccHHHhhCCCccceeE
Confidence 356699999999986532 122356777765433111 223333333 455433211111 112 2245
Q ss_pred EEEEeccCC-Chhhhhhc---CcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccc
Q 012219 246 LIYEYMEMG-SLFCVLRT---DEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGV 321 (468)
Q Consensus 246 lv~e~~~~g-sL~~~l~~---~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~ 321 (468)
+.|..+.+. -...++.. ...-...+|...++++..+|.+.+-|| ..|.+-||+.++|+|+++++.+.+.|-..
T Consensus 87 flmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH---~~Gh~vGDVn~~~~lVsd~~~V~LVdsDs 163 (637)
T COG4248 87 FLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLH---EHGHVVGDVNQNSFLVSDDSKVVLVDSDS 163 (637)
T ss_pred EecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHH---hcCCcccccCccceeeecCceEEEEcccc
Confidence 667766653 22333321 112223789999999999999999999 78999999999999999999999988654
Q ss_pred cccccCCCCCceecccccccccccccc-----CCCCCccchhhHHHHHHHHHHhC-CCCCCcccccchhh---h------
Q 012219 322 ARLLNFDSSNRTLLAGTYGYIAPELAY-----TMVVTEKCDVYSFGVVALEVLMG-KHPGELLSSSSWSL---D------ 386 (468)
Q Consensus 322 ~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~Gvil~el~tg-~~p~~~~~~~~~~~---~------ 386 (468)
-.. ..........+|...|.+||... +...+...|-|-+|+++++++.| ++||..+....... +
T Consensus 164 fqi-~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g 242 (637)
T COG4248 164 FQI-NANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHG 242 (637)
T ss_pred eee-ccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcc
Confidence 332 23344445567899999999754 34567789999999999999985 99998654321100 0
Q ss_pred ----cccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCC--CCCCCCHHHHHHHHHhc
Q 012219 387 ----KNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQ--PKSRPTMQLVSNEFIAR 442 (468)
Q Consensus 387 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~d--P~~RPs~~~v~~~l~~~ 442 (468)
..........+....+.... . ..+..+..+|+... +.-|||++.++..|-..
T Consensus 243 ~f~ya~~~~~g~~p~P~~~P~~~L-p---p~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al 300 (637)
T COG4248 243 RFAYASDQRRGLKPPPRSIPLSML-P---PDVQALFQQAFTESGVATPRPTAKAWVAALDAL 300 (637)
T ss_pred eeeechhccCCCCCCCCCCChhhc-C---HHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHH
Confidence 00000000111111111111 1 12555667788653 56899998888766543
No 457
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.86 E-value=1.2e-09 Score=109.38 Aligned_cols=155 Identities=21% Similarity=0.289 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCC---------ceecccccccccccccc
Q 012219 278 VKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSN---------RTLLAGTYGYIAPELAY 348 (468)
Q Consensus 278 ~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~---------~~~~~g~~~y~aPE~~~ 348 (468)
+.+++.|+.|+|. +.++||++|.|++|.++.++..||+.|+++......... .........|.|||++.
T Consensus 105 l~~v~dgl~flh~--sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHR--SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhcc--CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 3455689999996 789999999999999999999999999988654331110 01122455799999999
Q ss_pred CCCCCccchhhHHHHHHHHHHh-CCCCCCccccc-chhhhcccccccccCCCCCCccchhHHHHHHHHHHHHHhcccCCC
Q 012219 349 TMVVTEKCDVYSFGVVALEVLM-GKHPGELLSSS-SWSLDKNIKLIDLLDPRLSPPVDQKIRQDIILVSTVAFSCLRSQP 426 (468)
Q Consensus 349 ~~~~~~~~Dv~s~Gvil~el~t-g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~cl~~dP 426 (468)
....+.++|+||+||++|-+.. |+.-+...... ...... ...+.-........+.. +.+=+.+++..++
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~--~~~~~~~~~~s~~~p~e-------l~~~l~k~l~~~~ 253 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSR--NLLNAGAFGYSNNLPSE-------LRESLKKLLNGDS 253 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhh--cccccccccccccCcHH-------HHHHHHHHhcCCc
Confidence 9888999999999999999995 55443322111 111111 11111111111222222 4445567899999
Q ss_pred CCCCCHHHHHHHHHhcC
Q 012219 427 KSRPTMQLVSNEFIARN 443 (468)
Q Consensus 427 ~~RPs~~~v~~~l~~~~ 443 (468)
..||++..+........
T Consensus 254 ~~rp~~~~l~~~~ff~D 270 (700)
T KOG2137|consen 254 AVRPTLDLLLSIPFFSD 270 (700)
T ss_pred ccCcchhhhhcccccCC
Confidence 99999888876655443
No 458
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.81 E-value=3.3e-09 Score=91.25 Aligned_cols=77 Identities=39% Similarity=0.604 Sum_probs=16.2
Q ss_pred CCCcEEEccCCcccccCCcccc-cCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC----cCCCccce
Q 012219 4 SKLRVLELGNNLLSGSIPSEIN-KLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE----SVRKVPHL 78 (468)
Q Consensus 4 ~~l~~l~l~~N~l~g~~p~~~~-~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~----~~~~l~~l 78 (468)
.+++.|+|++|+|+ .|. .++ .+.+|+.|+||+|+|+ .++ .+..|+.|++|++++|+++ .+++ .+.+|..|
T Consensus 19 ~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L 93 (175)
T PF14580_consen 19 VKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQEL 93 (175)
T ss_dssp -------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT--EE
T ss_pred cccccccccccccc-ccc-chhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC-ccccchHHhCCcCCEE
Confidence 34555555555555 443 343 3555555555555555 332 3555555555555555555 3332 23445555
Q ss_pred ecccccc
Q 012219 79 YVYGKNF 85 (468)
Q Consensus 79 ~~~~n~l 85 (468)
++++|.+
T Consensus 94 ~L~~N~I 100 (175)
T PF14580_consen 94 YLSNNKI 100 (175)
T ss_dssp E-TTS--
T ss_pred ECcCCcC
Confidence 5555554
No 459
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.80 E-value=5.5e-08 Score=87.58 Aligned_cols=138 Identities=24% Similarity=0.236 Sum_probs=94.4
Q ss_pred ccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhh-------------------hhHHHHHHHHHHHhhccCC--c
Q 012219 172 FHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEEL-------------------ASLESFGNEARLLSQIRHR--N 230 (468)
Q Consensus 172 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-------------------~~~~~~~~e~~~l~~l~h~--n 230 (468)
..+...||-|--+.||.|..+.|.++|||.=+....+-. .......+|.+.|.+|... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 345678999999999999999999999995432211100 1233466889999988655 6
Q ss_pred eeeEEEEEeeCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCC
Q 012219 231 IVKLYGFCLHRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNS 310 (468)
Q Consensus 231 iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~ 310 (468)
+.+.+++ +...+||||++|-.|...- ++....-.++..|..-+..+- ..||||||+++-||++++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r--------~~~en~~~il~~il~~~~~~~---~~GiVHGDlSefNIlV~~ 237 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR--------LDVENPDEILDKILEEVRKAY---RRGIVHGDLSEFNILVTE 237 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc--------CcccCHHHHHHHHHHHHHHHH---HcCccccCCchheEEEec
Confidence 6666554 3458999999986554322 112222334444444444333 458999999999999999
Q ss_pred CCCeEEeecccccc
Q 012219 311 ELEAFVADFGVARL 324 (468)
Q Consensus 311 ~~~~kl~Dfg~~~~ 324 (468)
||.+.++||--+..
T Consensus 238 dg~~~vIDwPQ~v~ 251 (304)
T COG0478 238 DGDIVVIDWPQAVP 251 (304)
T ss_pred CCCEEEEeCccccc
Confidence 99999999966543
No 460
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.76 E-value=8.1e-08 Score=96.57 Aligned_cols=143 Identities=21% Similarity=0.231 Sum_probs=94.8
Q ss_pred ceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhh-------------------------------------hhHHHHHH
Q 012219 176 YCIGTGGYGSVYRARLPSGKVVALKKLHRSETEEL-------------------------------------ASLESFGN 218 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-------------------------------------~~~~~~~~ 218 (468)
..|+.++-|.||+|++++|+.||||+.+..-.... ...-+|.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 67999999999999999999999999975432211 01113555
Q ss_pred HHHHHhhcc----CCceeeEEEEEee-CCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHH-HHHHhcC
Q 012219 219 EARLLSQIR----HRNIVKLYGFCLH-RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHAL-SYLHHDC 292 (468)
Q Consensus 219 e~~~l~~l~----h~niv~l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l-~~LH~~~ 292 (468)
|...+.+++ ...-+.+=.+|++ .+...|+|||++|-.+.+....... ..+... ++..++++. ..+-
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~--g~d~k~---ia~~~~~~f~~q~~--- 282 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSA--GIDRKE---LAELLVRAFLRQLL--- 282 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhc--CCCHHH---HHHHHHHHHHHHHH---
Confidence 555555552 2222333334433 4567999999999988887432222 144333 333333321 1221
Q ss_pred CCCeEecCCCCCceeeCCCCCeEEeecccccccc
Q 012219 293 TPPIVHRDISSNNVLLNSELEAFVADFGVARLLN 326 (468)
Q Consensus 293 ~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 326 (468)
..|+.|.|..|.||+++.+++..+.|||....++
T Consensus 283 ~dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~ 316 (517)
T COG0661 283 RDGFFHADPHPGNILVRSDGRIVLLDFGIVGRLD 316 (517)
T ss_pred hcCccccCCCccceEEecCCcEEEEcCcceecCC
Confidence 3489999999999999999999999999987664
No 461
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=98.69 E-value=7.1e-09 Score=97.06 Aligned_cols=83 Identities=36% Similarity=0.582 Sum_probs=70.5
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCcccc----------------------cccccc-ccCCCCCceec
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSIN----------------------GKILSQ-LGEIPRIDTVD 58 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~----------------------g~~p~~-~~~l~~L~~l~ 58 (468)
.+++|+.|+|+||-+. .+|.+++.+..||.|++|+|+|. |.+|.+ +.++.+|.+||
T Consensus 433 ~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLD 511 (565)
T KOG0472|consen 433 QLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFRMLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLD 511 (565)
T ss_pred hhhcceeeecccchhh-hcchhhhhhhhhheecccccccccchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceec
Confidence 4788999999999998 99999999999999999999985 334344 78899999999
Q ss_pred ccCcccccccCCcCCCcc---ceeccccccc
Q 012219 59 LSMNNLSGSIPESVRKVP---HLYVYGKNFD 86 (468)
Q Consensus 59 l~~N~l~g~~p~~~~~l~---~l~~~~n~l~ 86 (468)
|.+|.+. .||..+++++ .|.+.||+|.
T Consensus 512 L~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 512 LQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred cCCCchh-hCChhhccccceeEEEecCCccC
Confidence 9999999 8998776654 5778999987
No 462
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.63 E-value=3.1e-07 Score=82.40 Aligned_cols=105 Identities=22% Similarity=0.307 Sum_probs=81.1
Q ss_pred HHHHHHHHHhhccC--CceeeEEEEEeeC----CEEEEEEEeccCC-ChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHH
Q 012219 215 SFGNEARLLSQIRH--RNIVKLYGFCLHR----KCMFLIYEYMEMG-SLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSY 287 (468)
Q Consensus 215 ~~~~e~~~l~~l~h--~niv~l~~~~~~~----~~~~lv~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~ 287 (468)
...+|...+..+.. -.+.+.+++.... ...++|+|++++. +|.+++..... .+......++.+++..++-
T Consensus 57 ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~---~~~~~~~~ll~~l~~~i~~ 133 (206)
T PF06293_consen 57 RAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ---LDPSQRRELLRALARLIAK 133 (206)
T ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc---cchhhHHHHHHHHHHHHHH
Confidence 46678887777743 2344556665542 2458999999874 78888875332 4556778899999999999
Q ss_pred HHhcCCCCeEecCCCCCceeeCCCC---CeEEeeccccccc
Q 012219 288 LHHDCTPPIVHRDISSNNVLLNSEL---EAFVADFGVARLL 325 (468)
Q Consensus 288 LH~~~~~~ivH~dlk~~NIll~~~~---~~kl~Dfg~~~~~ 325 (468)
|| ..||+|+|+++.|||++.+. .+.++||+.++..
T Consensus 134 lH---~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 134 LH---DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred HH---HCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 99 88999999999999999887 7889999987653
No 463
>PRK09902 hypothetical protein; Provisional
Probab=98.62 E-value=8.5e-07 Score=78.14 Aligned_cols=141 Identities=15% Similarity=0.089 Sum_probs=101.2
Q ss_pred eeeeCCceEEEEEcCCCCEEEEEEecCcchhh---hhhHHHHHHHHHHHhhccCC--ceeeEEEEEe-e----CCEEEEE
Q 012219 178 IGTGGYGSVYRARLPSGKVVALKKLHRSETEE---LASLESFGNEARLLSQIRHR--NIVKLYGFCL-H----RKCMFLI 247 (468)
Q Consensus 178 lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---~~~~~~~~~e~~~l~~l~h~--niv~l~~~~~-~----~~~~~lv 247 (468)
-|+||-+.|++..+. |+.+-+|+-...-... ......|.+|+..+.++... .+.+++ ++. . ....+||
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LV 103 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLV 103 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEE
Confidence 467888999998874 4468888765211111 11346899999999998532 244444 332 1 2236899
Q ss_pred EEeccC-CChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCC--eEEeecccccc
Q 012219 248 YEYMEM-GSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELE--AFVADFGVARL 324 (468)
Q Consensus 248 ~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~--~kl~Dfg~~~~ 324 (468)
+|-+.+ -+|.+++..... .+.+..++..++.+++..+.-|| ..|+.|+|+.+.||+++.++. +++.||--++.
T Consensus 104 Te~L~g~~~L~~~l~~~~~-~~~~~~~k~~il~~va~~ia~LH---~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 104 TEDMAGFISIADWYAQHAV-SPYSDEVRQAMLKAVALAFKKMH---SVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EEeCCCCccHHHHHhcCCc-CCcchHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 997764 578888754322 23577778899999999999999 889999999999999986666 89999976654
No 464
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.61 E-value=9.3e-07 Score=80.40 Aligned_cols=139 Identities=15% Similarity=0.150 Sum_probs=84.7
Q ss_pred ceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCc--eeeEEEEEeeCCEEEEEEEeccC
Q 012219 176 YCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRN--IVKLYGFCLHRKCMFLIYEYMEM 253 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n--iv~l~~~~~~~~~~~lv~e~~~~ 253 (468)
..||+|..+.||+. .+..+++|....... .....+|.+.+..+..-. +.++++++...+...+|||+++|
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~~-----~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G 78 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGFD-----KETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVG 78 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCCC-----HHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCC
Confidence 46899999999984 245677888865332 234568999998886433 46678888777778899999998
Q ss_pred CC-hhhhh---------------------hcCcccCCCCHHHHHH-HHH----------HHHH-HHHHHHhc-CCCCeEe
Q 012219 254 GS-LFCVL---------------------RTDEEAVGLDWAKRVN-VVK----------GMCH-ALSYLHHD-CTPPIVH 298 (468)
Q Consensus 254 gs-L~~~l---------------------~~~~~~~~l~~~~~~~-i~~----------~ia~-~l~~LH~~-~~~~ivH 298 (468)
.+ +...+ +.-.. .......... +.. .+.. ...+|... ....++|
T Consensus 79 ~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~-~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~H 157 (226)
T TIGR02172 79 KRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKC-DTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLH 157 (226)
T ss_pred ccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCC-CCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEe
Confidence 63 21111 11000 0011111000 000 0111 12222211 1346789
Q ss_pred cCCCCCceeeCCCCCeEEeecccccc
Q 012219 299 RDISSNNVLLNSELEAFVADFGVARL 324 (468)
Q Consensus 299 ~dlk~~NIll~~~~~~kl~Dfg~~~~ 324 (468)
+|+.|.||++++++ +.+.||+.+..
T Consensus 158 gD~~~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 158 GDFQIGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred cCCCCCcEEEcCCC-cEEEechhcCc
Confidence 99999999999988 89999998753
No 465
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.60 E-value=3.4e-08 Score=64.06 Aligned_cols=36 Identities=42% Similarity=0.705 Sum_probs=19.4
Q ss_pred CCcEEEccCCcccccCCcccccCCCCCEeeccCcccc
Q 012219 5 KLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSIN 41 (468)
Q Consensus 5 ~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 41 (468)
+|++|+|++|+|+ .+|+++++|++|+.|+|++|+|+
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 4555555555555 45555555555555555555555
No 466
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.59 E-value=3.6e-08 Score=63.97 Aligned_cols=40 Identities=35% Similarity=0.622 Sum_probs=34.7
Q ss_pred CCCCEeeccCccccccccccccCCCCCceecccCcccccccC
Q 012219 28 QELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIP 69 (468)
Q Consensus 28 ~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p 69 (468)
++|++|+|++|+|+ .+|+.|++|++|+.|++++|+++ .+|
T Consensus 1 ~~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~-~i~ 40 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS-DIS 40 (44)
T ss_dssp TT-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS-BEG
T ss_pred CcceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC-CCc
Confidence 57999999999999 78888999999999999999999 554
No 467
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=98.59 E-value=1.1e-08 Score=100.84 Aligned_cols=82 Identities=24% Similarity=0.375 Sum_probs=61.5
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCcccccccccc-ccCCCCCceecccCcccccccCCc---CCCccc
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQ-LGEIPRIDTVDLSMNNLSGSIPES---VRKVPH 77 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~~~l~~L~~l~l~~N~l~g~~p~~---~~~l~~ 77 (468)
.|..|+.||||.|+|+ ..|..+.+-.++-.|+||+|+|. +||.+ |-+|+.|-.||||+|+|. .+|.. +..|+.
T Consensus 101 ~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~Lqt 177 (1255)
T KOG0444|consen 101 RLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQT 177 (1255)
T ss_pred ccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhh
Confidence 4667788888888888 78888877778888888888887 77766 667888888888888888 66653 344566
Q ss_pred eeccccccc
Q 012219 78 LYVYGKNFD 86 (468)
Q Consensus 78 l~~~~n~l~ 86 (468)
|.+++|++.
T Consensus 178 L~Ls~NPL~ 186 (1255)
T KOG0444|consen 178 LKLSNNPLN 186 (1255)
T ss_pred hhcCCChhh
Confidence 677777653
No 468
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.58 E-value=2.3e-08 Score=86.09 Aligned_cols=82 Identities=32% Similarity=0.445 Sum_probs=39.4
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccc-cCCCCCceecccCcccccccCC-----cCCCc
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQL-GEIPRIDTVDLSMNNLSGSIPE-----SVRKV 75 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~-~~l~~L~~l~l~~N~l~g~~p~-----~~~~l 75 (468)
.|++|+.|+||+|+|+ .++ .+..|+.|+.|+|++|+|+ .+++.+ ..+++|+.|+|++|++. .+-+ .+.+|
T Consensus 40 ~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~L~~N~I~-~l~~l~~L~~l~~L 115 (175)
T PF14580_consen 40 TLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQELYLSNNKIS-DLNELEPLSSLPKL 115 (175)
T ss_dssp T-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT--EEE-TTS----SCCCCGGGGG-TT-
T ss_pred hhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCC-ccccchHHhCCcCCEEECcCCcCC-ChHHhHHHHcCCCc
Confidence 4678999999999999 776 6888999999999999999 666555 47999999999999998 4443 45667
Q ss_pred cceecccccccc
Q 012219 76 PHLYVYGKNFDV 87 (468)
Q Consensus 76 ~~l~~~~n~l~~ 87 (468)
..|.+.+|+++.
T Consensus 116 ~~L~L~~NPv~~ 127 (175)
T PF14580_consen 116 RVLSLEGNPVCE 127 (175)
T ss_dssp -EEE-TT-GGGG
T ss_pred ceeeccCCcccc
Confidence 778899988753
No 469
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=98.52 E-value=1.5e-08 Score=99.24 Aligned_cols=84 Identities=27% Similarity=0.371 Sum_probs=43.8
Q ss_pred CCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC------cCCCccc
Q 012219 4 SKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE------SVRKVPH 77 (468)
Q Consensus 4 ~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~------~~~~l~~ 77 (468)
.+|++|+||+|+|+..-|++|..|.+|+.|+|++|+++..--..|..+++|+.|||++|.+++.|-+ ++..|..
T Consensus 317 qkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~Lrk 396 (873)
T KOG4194|consen 317 QKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRK 396 (873)
T ss_pred ccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhh
Confidence 3455555555555522233455555555555555555533333455566666666666666655543 3344445
Q ss_pred eecccccccc
Q 012219 78 LYVYGKNFDV 87 (468)
Q Consensus 78 l~~~~n~l~~ 87 (468)
|.+.||++..
T Consensus 397 L~l~gNqlk~ 406 (873)
T KOG4194|consen 397 LRLTGNQLKS 406 (873)
T ss_pred eeecCceeee
Confidence 5566666543
No 470
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=98.49 E-value=1.3e-08 Score=99.49 Aligned_cols=89 Identities=19% Similarity=0.247 Sum_probs=52.1
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC----cCCCccc
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE----SVRKVPH 77 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~----~~~~l~~ 77 (468)
+|++|+.|+||+|.|...-++++.-+++|++|+||+|+|+..-|.+|..|+.|++|+|++|+++ .+-+ .+.+|..
T Consensus 291 gLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~-~l~e~af~~lssL~~ 369 (873)
T KOG4194|consen 291 GLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSID-HLAEGAFVGLSSLHK 369 (873)
T ss_pred ccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchH-HHHhhHHHHhhhhhh
Confidence 4555666666666666444555555666666666666666444444666666666666666665 3332 3455666
Q ss_pred eecccccccccCCC
Q 012219 78 LYVYGKNFDVEIPN 91 (468)
Q Consensus 78 l~~~~n~l~~~~p~ 91 (468)
|++.+|.++..+-+
T Consensus 370 LdLr~N~ls~~IED 383 (873)
T KOG4194|consen 370 LDLRSNELSWCIED 383 (873)
T ss_pred hcCcCCeEEEEEec
Confidence 77777777665544
No 471
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.48 E-value=1.1e-07 Score=67.10 Aligned_cols=58 Identities=28% Similarity=0.449 Sum_probs=46.6
Q ss_pred CCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcCC---Cccceecccccc
Q 012219 28 QELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESVR---KVPHLYVYGKNF 85 (468)
Q Consensus 28 ~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~---~l~~l~~~~n~l 85 (468)
++|++|+|++|+|+..-+..|.++++|+.|++++|+++...|..|. +++.|++++|++
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 5799999999999955456799999999999999999954444554 455678888864
No 472
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.47 E-value=2.3e-06 Score=75.72 Aligned_cols=140 Identities=18% Similarity=0.194 Sum_probs=90.4
Q ss_pred hhCccccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHH------HHHHHHHHhhccCC---ceeeEEEEEe
Q 012219 169 TEDFHIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLES------FGNEARLLSQIRHR---NIVKLYGFCL 239 (468)
Q Consensus 169 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~------~~~e~~~l~~l~h~---niv~l~~~~~ 239 (468)
..+|...+.+.......|.+-.. +|+.+++|.......-....... ..+.+..+.+++.. ....++....
T Consensus 30 ~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~e 108 (229)
T PF06176_consen 30 DNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAE 108 (229)
T ss_pred hCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeee
Confidence 35677777888877777777776 57889999886543322111221 22334444444322 2222222222
Q ss_pred -----eCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCe
Q 012219 240 -----HRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEA 314 (468)
Q Consensus 240 -----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~ 314 (468)
.....+++|||++|..|.+... ++. .++..+.+++.-+| ..|+.|+|..|+|+++++++ +
T Consensus 109 kk~~~~~~~~~ll~EYIeG~~l~d~~~-------i~e----~~~~ki~~~ikqlH---~~G~~HGD~hpgNFlv~~~~-i 173 (229)
T PF06176_consen 109 KKIFRYTSSYVLLMEYIEGVELNDIED-------IDE----DLAEKIVEAIKQLH---KHGFYHGDPHPGNFLVSNNG-I 173 (229)
T ss_pred eeeccceeEEEEEEEEecCeecccchh-------cCH----HHHHHHHHHHHHHH---HcCCccCCCCcCcEEEECCc-E
Confidence 2344679999999988876543 221 24456778899999 88999999999999999665 8
Q ss_pred EEeecccccc
Q 012219 315 FVADFGVARL 324 (468)
Q Consensus 315 kl~Dfg~~~~ 324 (468)
++.||+..+.
T Consensus 174 ~iID~~~k~~ 183 (229)
T PF06176_consen 174 RIIDTQGKRM 183 (229)
T ss_pred EEEECccccc
Confidence 8999986643
No 473
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.47 E-value=1.1e-06 Score=88.10 Aligned_cols=145 Identities=19% Similarity=0.217 Sum_probs=93.3
Q ss_pred cceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhh----------------------------------hhHHHHHHHH
Q 012219 175 KYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEEL----------------------------------ASLESFGNEA 220 (468)
Q Consensus 175 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~----------------------------------~~~~~~~~e~ 220 (468)
.+.||.-+.|.||+|++++|+.||||+-+..-.... ...-+|.+|.
T Consensus 166 ~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 166 EEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred cchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 367999999999999999999999999875432210 0111355666
Q ss_pred HHHhhc----cCCc---eeeEEEEEee-CCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcC
Q 012219 221 RLLSQI----RHRN---IVKLYGFCLH-RKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDC 292 (468)
Q Consensus 221 ~~l~~l----~h~n---iv~l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~ 292 (468)
+-..+. .|-+ -|.+=.++++ .....|+||||+|..+.+.-.-... .++...+..-+.+...-.-+
T Consensus 246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~~--gi~~~~i~~~l~~~~~~qIf----- 318 (538)
T KOG1235|consen 246 KNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDKR--GISPHDILNKLVEAYLEQIF----- 318 (538)
T ss_pred HhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHHc--CCCHHHHHHHHHHHHHHHHH-----
Confidence 554443 3555 1222233332 3457999999999888665322221 24545443333332222222
Q ss_pred CCCeEecCCCCCceeeCC----CCCeEEeecccccccc
Q 012219 293 TPPIVHRDISSNNVLLNS----ELEAFVADFGVARLLN 326 (468)
Q Consensus 293 ~~~ivH~dlk~~NIll~~----~~~~kl~Dfg~~~~~~ 326 (468)
..|++|+|-.|.||+++. ++.+.+-|||+...+.
T Consensus 319 ~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is 356 (538)
T KOG1235|consen 319 KTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS 356 (538)
T ss_pred hcCCccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence 348999999999999984 6788999999987654
No 474
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=98.47 E-value=1.9e-08 Score=99.25 Aligned_cols=81 Identities=33% Similarity=0.522 Sum_probs=53.4
Q ss_pred CCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcCCCcc---cee
Q 012219 3 CSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESVRKVP---HLY 79 (468)
Q Consensus 3 l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~---~l~ 79 (468)
|.+|..+|||.|+|. .+|+.+-++.+|+.|+||+|+|+ .+....+.-.+|++||||+|+|+ .+|+.+..|+ .|+
T Consensus 221 l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy 297 (1255)
T KOG0444|consen 221 LHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLY 297 (1255)
T ss_pred hhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHH
Confidence 456667777777777 77777777777777777777777 55555555566777777777777 6777554443 345
Q ss_pred ccccccc
Q 012219 80 VYGKNFD 86 (468)
Q Consensus 80 ~~~n~l~ 86 (468)
+.+|.++
T Consensus 298 ~n~NkL~ 304 (1255)
T KOG0444|consen 298 ANNNKLT 304 (1255)
T ss_pred hccCccc
Confidence 5555554
No 475
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=98.46 E-value=6.3e-08 Score=90.68 Aligned_cols=88 Identities=19% Similarity=0.272 Sum_probs=76.2
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcCC---Cccce
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESVR---KVPHL 78 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~---~l~~l 78 (468)
+|++|+.|+|++|.|++.-+.+|..+..|+.|+|..|+|.-.--..|.+|++|++|+|.+|+++...|..|. .+..|
T Consensus 272 ~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l 351 (498)
T KOG4237|consen 272 KLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTL 351 (498)
T ss_pred hcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeee
Confidence 589999999999999988889999999999999999999855566799999999999999999977777654 45667
Q ss_pred ecccccccccC
Q 012219 79 YVYGKNFDVEI 89 (468)
Q Consensus 79 ~~~~n~l~~~~ 89 (468)
++..|++.+.+
T Consensus 352 ~l~~Np~~CnC 362 (498)
T KOG4237|consen 352 NLLSNPFNCNC 362 (498)
T ss_pred ehccCcccCcc
Confidence 88888887753
No 476
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=98.41 E-value=3e-08 Score=92.96 Aligned_cols=85 Identities=20% Similarity=0.282 Sum_probs=64.2
Q ss_pred CCCCCCcEEEccCCcccccCCcccccCCCCCEeeccCcccccccccccc-CCCCCceecccCcccccccCCcC---CCcc
Q 012219 1 MNCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLG-EIPRIDTVDLSMNNLSGSIPESV---RKVP 76 (468)
Q Consensus 1 ~~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~-~l~~L~~l~l~~N~l~g~~p~~~---~~l~ 76 (468)
|.+.+|.-|+|..|.|+ .+| +|++|..|..|+++.|++. .+|++.. .|++|.+|||-.|+++ .+|+.+ .++.
T Consensus 203 g~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~ 278 (565)
T KOG0472|consen 203 GGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLE 278 (565)
T ss_pred cchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhh
Confidence 34667777888888888 777 8888888888888888887 7777754 7888888888888888 788754 4455
Q ss_pred ceecccccccccC
Q 012219 77 HLYVYGKNFDVEI 89 (468)
Q Consensus 77 ~l~~~~n~l~~~~ 89 (468)
.|++++|.+++..
T Consensus 279 rLDlSNN~is~Lp 291 (565)
T KOG0472|consen 279 RLDLSNNDISSLP 291 (565)
T ss_pred hhcccCCccccCC
Confidence 6778887776643
No 477
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.39 E-value=5.8e-06 Score=73.98 Aligned_cols=157 Identities=22% Similarity=0.255 Sum_probs=100.6
Q ss_pred CcCHHHHHHHhhCccccceee---eeCCceEEEEEcCCCCEEEEEEecCcchhhhh---------------------hHH
Q 012219 159 RITFQDMIEATEDFHIKYCIG---TGGYGSVYRARLPSGKVVALKKLHRSETEELA---------------------SLE 214 (468)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~lg---~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~---------------------~~~ 214 (468)
..+++.+....+...+....| .|.-+.||+|...++..+|||+++........ ...
T Consensus 34 ~~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~ 113 (268)
T COG1718 34 KRTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFA 113 (268)
T ss_pred hHHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHH
Confidence 345566666666666666555 56667899998888999999999744322111 011
Q ss_pred HHHHHHHHHhhcc--CCceeeEEEEEeeCCEEEEEEEeccCCCh-hhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhc
Q 012219 215 SFGNEARLLSQIR--HRNIVKLYGFCLHRKCMFLIYEYMEMGSL-FCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHD 291 (468)
Q Consensus 215 ~~~~e~~~l~~l~--h~niv~l~~~~~~~~~~~lv~e~~~~gsL-~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~ 291 (468)
.-..|+..|.++. +-.+.+.+++. .-.|||||+..... .-.|. ..++...+...+..++.+.+.-|-.
T Consensus 114 W~~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~Lk----Dv~~e~~e~~~~~~~~v~~~~~l~~- 184 (268)
T COG1718 114 WARKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLK----DVPLELEEAEGLYEDVVEYMRRLYK- 184 (268)
T ss_pred HHHHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCcc----cCCcCchhHHHHHHHHHHHHHHHHH-
Confidence 2345666676663 33333444433 24799999965311 11111 1112333566677778788777763
Q ss_pred CCCCeEecCCCCCceeeCCCCCeEEeecccccccc
Q 012219 292 CTPPIVHRDISSNNVLLNSELEAFVADFGVARLLN 326 (468)
Q Consensus 292 ~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~ 326 (468)
..++||+||+.-|||+. ++.+.|+|||.|....
T Consensus 185 -~a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~ 217 (268)
T COG1718 185 -EAGLVHGDLSEYNILVH-DGEPYIIDVSQAVTID 217 (268)
T ss_pred -hcCcccccchhhheEEE-CCeEEEEECccccccC
Confidence 47999999999999999 8899999999886654
No 478
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=98.38 E-value=3.9e-08 Score=101.21 Aligned_cols=80 Identities=38% Similarity=0.610 Sum_probs=45.6
Q ss_pred CCCCcEEEccCCcccccCCcc-cccCCCCCEeeccCccccccccc----------------------cccCCCCCceecc
Q 012219 3 CSKLRVLELGNNLLSGSIPSE-INKLQELNYLNLSHNSINGKILS----------------------QLGEIPRIDTVDL 59 (468)
Q Consensus 3 l~~l~~l~l~~N~l~g~~p~~-~~~l~~L~~L~l~~N~l~g~~p~----------------------~~~~l~~L~~l~l 59 (468)
.++|+.|+|++|+|. ++|+. +.+|..|+.|+||+|+|+ .+|. ++.+++.|+.+||
T Consensus 382 ~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~~fPe~~~l~qL~~lDl 459 (1081)
T KOG0618|consen 382 FKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLLSFPELAQLPQLKVLDL 459 (1081)
T ss_pred ccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCceeechhhhhcCcceEEec
Confidence 345555555555554 45543 445555555555555555 4443 5566667777777
Q ss_pred cCcccc-cccCCcC--CCccceeccccc
Q 012219 60 SMNNLS-GSIPESV--RKVPHLYVYGKN 84 (468)
Q Consensus 60 ~~N~l~-g~~p~~~--~~l~~l~~~~n~ 84 (468)
|.|+|+ +.+|... .+|+.|+++||.
T Consensus 460 S~N~L~~~~l~~~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 460 SCNNLSEVTLPEALPSPNLKYLDLSGNT 487 (1081)
T ss_pred ccchhhhhhhhhhCCCcccceeeccCCc
Confidence 777775 2344432 466777777765
No 479
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.35 E-value=1.1e-07 Score=85.89 Aligned_cols=78 Identities=27% Similarity=0.417 Sum_probs=67.0
Q ss_pred CCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCC---cCCCccceecc
Q 012219 5 KLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPE---SVRKVPHLYVY 81 (468)
Q Consensus 5 ~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~---~~~~l~~l~~~ 81 (468)
.|+.||||+|.|+ .|..++.-++.++.|++|+|.++ .+- ++..|++|+.||||+|.++ .+-. .+++.+.|.++
T Consensus 285 ~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La 360 (490)
T KOG1259|consen 285 ELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQ-NLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLA 360 (490)
T ss_pred hhhhccccccchh-hhhhhhhhccceeEEecccccee-eeh-hhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehh
Confidence 4889999999999 99999999999999999999998 553 4999999999999999998 4443 57788888888
Q ss_pred ccccc
Q 012219 82 GKNFD 86 (468)
Q Consensus 82 ~n~l~ 86 (468)
+|.+.
T Consensus 361 ~N~iE 365 (490)
T KOG1259|consen 361 QNKIE 365 (490)
T ss_pred hhhHh
Confidence 77653
No 480
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=98.33 E-value=7.5e-08 Score=99.18 Aligned_cols=70 Identities=29% Similarity=0.445 Sum_probs=62.9
Q ss_pred CCCCcEEEccCCcccccCCcccccCCCCCEeeccCcccccccccc-ccCCCCCceecccCcccccccCCcCCC
Q 012219 3 CSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQ-LGEIPRIDTVDLSMNNLSGSIPESVRK 74 (468)
Q Consensus 3 l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~-~~~l~~L~~l~l~~N~l~g~~p~~~~~ 74 (468)
++.|+.|+|.+|.|+...=+.+.+...|+.|+|++|+|+ .+|++ +.+|..|+.|+||+|+|+ .+|+.+.+
T Consensus 358 ~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~ 428 (1081)
T KOG0618|consen 358 HAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVAN 428 (1081)
T ss_pred hHHHHHHHHhcCcccccchhhhccccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHh
Confidence 456899999999999988889999999999999999999 88877 899999999999999999 88875433
No 481
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.32 E-value=8.4e-06 Score=74.59 Aligned_cols=143 Identities=20% Similarity=0.208 Sum_probs=83.2
Q ss_pred ceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCC--ceeeEEEEEee---CCEEEEEEEe
Q 012219 176 YCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHR--NIVKLYGFCLH---RKCMFLIYEY 250 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~--niv~l~~~~~~---~~~~~lv~e~ 250 (468)
+.++.|..+.||+....+ ..+++|...... ....+.+|..++..+... .+.+++.++.. ....+++|++
T Consensus 3 ~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~~-----~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~ 76 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDD-GRYVLKFYRPPD-----AAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEY 76 (239)
T ss_dssp EEEEESSSSEEEEEEETT-SEEEEEEESSHH-----HHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEE
T ss_pred ccCCCCCeeeEEEEEECC-cEEEEEEeCCCC-----CHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEE
Confidence 568999999999999877 689999976551 234566788888877533 34566665433 3457899999
Q ss_pred ccCCChhh----------------hh---hcC-cccCCCCHHH---------HHHH------------HHHHHH-HHHHH
Q 012219 251 MEMGSLFC----------------VL---RTD-EEAVGLDWAK---------RVNV------------VKGMCH-ALSYL 288 (468)
Q Consensus 251 ~~~gsL~~----------------~l---~~~-~~~~~l~~~~---------~~~i------------~~~ia~-~l~~L 288 (468)
+++..+.. .+ +.. .......+.. .... ...+.. .+..+
T Consensus 77 i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (239)
T PF01636_consen 77 IPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQEL 156 (239)
T ss_dssp ESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred eccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHH
Confidence 99988777 11 111 0111111100 0000 111222 23333
Q ss_pred Hh----cCCCCeEecCCCCCceeeC-CCCCeEEeecccccc
Q 012219 289 HH----DCTPPIVHRDISSNNVLLN-SELEAFVADFGVARL 324 (468)
Q Consensus 289 H~----~~~~~ivH~dlk~~NIll~-~~~~~kl~Dfg~~~~ 324 (468)
+. .....++|+|+.|+||+++ +++.+.|.||+.+..
T Consensus 157 ~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 157 EALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred HhhhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 32 1256799999999999999 556667999987743
No 482
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.27 E-value=2e-07 Score=92.75 Aligned_cols=181 Identities=20% Similarity=0.187 Sum_probs=129.9
Q ss_pred ceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCc-eeeEEEEEeeCCEEEEEEEeccCC
Q 012219 176 YCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRN-IVKLYGFCLHRKCMFLIYEYMEMG 254 (468)
Q Consensus 176 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~~~~lv~e~~~~g 254 (468)
+-+++|++++++|.+-.-.+....+.+... ....-++++|.+++||| .+..++-+..+...+++++++.++
T Consensus 248 h~fvK~altknpKkRptaeklL~h~fvs~~--------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~ 319 (829)
T KOG0576|consen 248 HNFVKGALTKNPKKRPTAEKLLQHPFVSQT--------LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTG 319 (829)
T ss_pred HHHHHHHhcCCCccCCChhhheeceeeccc--------hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCC
Confidence 346789999999997544444445555433 22346889999999999 777777777777889999999877
Q ss_pred -ChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceeeCCCCCeEEeeccccccccCCCCCce
Q 012219 255 -SLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVARLLNFDSSNRT 333 (468)
Q Consensus 255 -sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~ 333 (468)
+....... ....+...+...+...-+++++++| +..=+|+| ||+.++ ...+..||+....+.... ...
T Consensus 320 rs~~~~~~~--se~~~~~~~~~~~~r~et~~l~~l~---~~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~-~~~ 388 (829)
T KOG0576|consen 320 RSSALEMTV--SEIALEQYQFAYPLRKETRPLAELH---SSYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM-KPR 388 (829)
T ss_pred ccccccCCh--hhHhhhhhhhhhhhhhhcccccccc---cccccCcc----cccccc-cccccccccCCcccCccc-ccc
Confidence 22221111 1112334445556666778899999 33357888 777766 678999999987775432 445
Q ss_pred eccccccccccccccCCCCCccchhhHHHHHHHHHHhCCCCC
Q 012219 334 LLAGTYGYIAPELAYTMVVTEKCDVYSFGVVALEVLMGKHPG 375 (468)
Q Consensus 334 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~el~tg~~p~ 375 (468)
...+++.|+|||+.....+..+.|+|+.|+-..++--|-+|-
T Consensus 389 t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr 430 (829)
T KOG0576|consen 389 TAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPR 430 (829)
T ss_pred cCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCC
Confidence 567999999999999999999999999998777777777663
No 483
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.26 E-value=5.1e-06 Score=73.05 Aligned_cols=105 Identities=24% Similarity=0.324 Sum_probs=82.7
Q ss_pred HHHHHHHhhccC-CceeeEEEEEeeCCEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 012219 217 GNEARLLSQIRH-RNIVKLYGFCLHRKCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPP 295 (468)
Q Consensus 217 ~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ 295 (468)
..|.-+++.+++ +++.+++|+|- .+++.||...+++...-..-..-...+|..+.+||.++++.+.++++.....
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~ 82 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGF 82 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 357888888876 69999999994 3779999987766432111111123689999999999999999999765556
Q ss_pred eEecCCCCCceeeCCCCCeEEeeccccccc
Q 012219 296 IVHRDISSNNVLLNSELEAFVADFGVARLL 325 (468)
Q Consensus 296 ivH~dlk~~NIll~~~~~~kl~Dfg~~~~~ 325 (468)
+.-.|++++|+-+++++++|+.|.+.+...
T Consensus 83 ~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 83 FYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred EEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 888999999999999999999999876544
No 484
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.22 E-value=2e-05 Score=72.81 Aligned_cols=139 Identities=13% Similarity=0.101 Sum_probs=84.4
Q ss_pred eeeeCC-ceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CCceeeEEEEEeeCCEEEEEEEeccCCC
Q 012219 178 IGTGGY-GSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIR-HRNIVKLYGFCLHRKCMFLIYEYMEMGS 255 (468)
Q Consensus 178 lg~G~~-g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~~gs 255 (468)
|..|.+ ..||+.... +..+.+|...... .....+|++++..+. +--+.+++++....+..++|||+++|.+
T Consensus 6 ~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~------~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~ 78 (244)
T cd05150 6 VTEGQSGATVYRLDGK-NPGLYLKIAPSGP------TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVP 78 (244)
T ss_pred cCCCCCcCeEEEEcCC-CCcEEEEecCCCc------ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCcc
Confidence 455555 788999764 4678888886543 123557888887774 3445577777776667899999999987
Q ss_pred hhhhh-------------------hcCcc-cCCCC--HHHHHHHHH--------------------HHHHHHHHHHh---
Q 012219 256 LFCVL-------------------RTDEE-AVGLD--WAKRVNVVK--------------------GMCHALSYLHH--- 290 (468)
Q Consensus 256 L~~~l-------------------~~~~~-~~~l~--~~~~~~i~~--------------------~ia~~l~~LH~--- 290 (468)
+.... +.... ..++. ......... .+...+..|-.
T Consensus 79 l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 158 (244)
T cd05150 79 AAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRP 158 (244)
T ss_pred HhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCC
Confidence 76432 11100 00111 000010000 01111222211
Q ss_pred -cCCCCeEecCCCCCceeeCCCCCeEEeeccccc
Q 012219 291 -DCTPPIVHRDISSNNVLLNSELEAFVADFGVAR 323 (468)
Q Consensus 291 -~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~~ 323 (468)
.....++|+|+.|.||+++++..+.|.||+.+.
T Consensus 159 ~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 159 AEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred CcCceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 114569999999999999998778899998774
No 485
>PLN02876 acyl-CoA dehydrogenase
Probab=98.17 E-value=3.2e-05 Score=84.01 Aligned_cols=149 Identities=19% Similarity=0.291 Sum_probs=91.5
Q ss_pred cceeeeeCCceEEEEEcCCC---CEEEEEEecCcchhhhhhHHHHHHHHHHHhhcc-CCce--eeEEEEEeeC---CEEE
Q 012219 175 KYCIGTGGYGSVYRARLPSG---KVVALKKLHRSETEELASLESFGNEARLLSQIR-HRNI--VKLYGFCLHR---KCMF 245 (468)
Q Consensus 175 ~~~lg~G~~g~Vy~~~~~~~---~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~-h~ni--v~l~~~~~~~---~~~~ 245 (468)
...++.|.++.+|+....++ ..+++|+....... .....+.+|+++++.+. |.++ .+++.+|.+. +..+
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~--~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~f 120 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLL--QSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAF 120 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccC--ccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCce
Confidence 45688999999999876554 46777776543221 11246779999999995 6654 7788888764 4578
Q ss_pred EEEEeccCCChhhh-----------------------hhcCc-cc-------CCCCH--HHHHHH---------------
Q 012219 246 LIYEYMEMGSLFCV-----------------------LRTDE-EA-------VGLDW--AKRVNV--------------- 277 (468)
Q Consensus 246 lv~e~~~~gsL~~~-----------------------l~~~~-~~-------~~l~~--~~~~~i--------------- 277 (468)
+||||++|..+.+. ||.-. .. .+..+ .+.-.+
T Consensus 121 lVME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~~ 200 (822)
T PLN02876 121 YIMEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPPR 200 (822)
T ss_pred EEEEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCCC
Confidence 99999998653211 11100 00 00111 011111
Q ss_pred HHHHHHHHHHHHhcCC--------CCeEecCCCCCceeeCCC-CC-eEEeeccccccc
Q 012219 278 VKGMCHALSYLHHDCT--------PPIVHRDISSNNVLLNSE-LE-AFVADFGVARLL 325 (468)
Q Consensus 278 ~~~ia~~l~~LH~~~~--------~~ivH~dlk~~NIll~~~-~~-~kl~Dfg~~~~~ 325 (468)
...+...+.+|..+.. ..++|+|+++.||+++.+ .. +-|.||.++..-
T Consensus 201 ~~~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~G 258 (822)
T PLN02876 201 NPKMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTLG 258 (822)
T ss_pred ChhHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeeccccC
Confidence 1123344567743221 359999999999999853 33 468999987654
No 486
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=98.16 E-value=2.4e-06 Score=90.33 Aligned_cols=75 Identities=24% Similarity=0.458 Sum_probs=39.5
Q ss_pred CCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcCC-Cccceecccc
Q 012219 5 KLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESVR-KVPHLYVYGK 83 (468)
Q Consensus 5 ~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~-~l~~l~~~~n 83 (468)
+|+.|+|++|+|+ .+|..+. .+|++|+|++|+|+ .+|..+. ++|+.|+|++|+++ .+|..+. +|..|++++|
T Consensus 200 ~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~s~L~~L~Ls~N 272 (754)
T PRK15370 200 QITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLPSALQSLDLFHN 272 (754)
T ss_pred CCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHhCCCCEEECcCC
Confidence 4666666666666 5665544 35666666666666 4554432 24555555555554 4444322 3444444444
Q ss_pred ccc
Q 012219 84 NFD 86 (468)
Q Consensus 84 ~l~ 86 (468)
++.
T Consensus 273 ~L~ 275 (754)
T PRK15370 273 KIS 275 (754)
T ss_pred ccC
Confidence 444
No 487
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=98.11 E-value=3e-06 Score=89.28 Aligned_cols=32 Identities=22% Similarity=0.458 Sum_probs=14.2
Q ss_pred CCceecccCcccccccCCcCCCccceecccccc
Q 012219 53 RIDTVDLSMNNLSGSIPESVRKVPHLYVYGKNF 85 (468)
Q Consensus 53 ~L~~l~l~~N~l~g~~p~~~~~l~~l~~~~n~l 85 (468)
+|+.|+|++|+|+ .+|....++..|++++|.+
T Consensus 343 ~Lq~LdLS~N~Ls-~LP~lp~~L~~L~Ls~N~L 374 (788)
T PRK15387 343 GLQELSVSDNQLA-SLPTLPSELYKLWAYNNRL 374 (788)
T ss_pred ccceEecCCCccC-CCCCCCcccceehhhcccc
Confidence 4455555555555 3443333333344444333
No 488
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.08 E-value=4.7e-07 Score=72.62 Aligned_cols=72 Identities=22% Similarity=0.415 Sum_probs=54.2
Q ss_pred CCCcEEEccCCcccccCCcccccC-CCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcCCCccce
Q 012219 4 SKLRVLELGNNLLSGSIPSEINKL-QELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESVRKVPHL 78 (468)
Q Consensus 4 ~~l~~l~l~~N~l~g~~p~~~~~l-~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l 78 (468)
..|+..+|++|.|. .+|+.|... +.+++|+|++|.|+ .+|.++..++.|+.||++.|.|. ..|.-+..|..+
T Consensus 53 ~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l 125 (177)
T KOG4579|consen 53 YELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKL 125 (177)
T ss_pred ceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhH
Confidence 34667788888888 778777664 37888888888888 77888888888888888888888 677655444443
No 489
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=98.02 E-value=6.7e-07 Score=87.69 Aligned_cols=78 Identities=33% Similarity=0.523 Sum_probs=58.5
Q ss_pred CcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcCCCccc--eecccc
Q 012219 6 LRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESVRKVPH--LYVYGK 83 (468)
Q Consensus 6 l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~--l~~~~n 83 (468)
|+.|.++||+++ .+|..++.+..|..||.|.|.+. .+|+.+++|.+|+.|++..|++. .+|..+..|+- |+++.|
T Consensus 145 Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~LpLi~lDfScN 221 (722)
T KOG0532|consen 145 LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSLPLIRLDFSCN 221 (722)
T ss_pred ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCCceeeeecccC
Confidence 778888888888 88888888888888888888888 78888888877777777666666 56665555443 555666
Q ss_pred ccc
Q 012219 84 NFD 86 (468)
Q Consensus 84 ~l~ 86 (468)
+++
T Consensus 222 kis 224 (722)
T KOG0532|consen 222 KIS 224 (722)
T ss_pred cee
Confidence 554
No 490
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=98.01 E-value=5.3e-06 Score=87.46 Aligned_cols=71 Identities=23% Similarity=0.390 Sum_probs=36.8
Q ss_pred CCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcCCCccceeccccc
Q 012219 5 KLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESVRKVPHLYVYGKN 84 (468)
Q Consensus 5 ~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~~n~ 84 (468)
+|+.|+|++|+|+ .+|.. +++|++|+|++|+|+ .+|.. .++|+.|+|++|+|+ .+|..+.+|..|++++|.
T Consensus 223 ~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~N~L~-~Lp~lp~~L~~L~Ls~N~ 293 (788)
T PRK15387 223 HITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLT-SLPVL---PPGLLELSIFSNPLT-HLPALPSGLCKLWIFGNQ 293 (788)
T ss_pred CCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccC-cccCc---ccccceeeccCCchh-hhhhchhhcCEEECcCCc
Confidence 4667777777776 56642 456777777777776 45532 234444444444444 333333333333333333
No 491
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=98.01 E-value=5.6e-05 Score=64.07 Aligned_cols=130 Identities=20% Similarity=0.259 Sum_probs=88.8
Q ss_pred cccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCCceee-EEEEEeeCCEEEEEEEec
Q 012219 173 HIKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHRNIVK-LYGFCLHRKCMFLIYEYM 251 (468)
Q Consensus 173 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~-l~~~~~~~~~~~lv~e~~ 251 (468)
...+.||+|.+|.||+|.+. |..+|+|+-..+.. ...+..|++++..+.-.++.+ ++.|-.+ .+.|||+
T Consensus 25 ~v~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~ds~-----r~~l~kEakiLeil~g~~~~p~vy~yg~~----~i~me~i 94 (201)
T COG2112 25 RVEKELAKGTTSVVYLGEWR-GGEVALKVRRRDSP-----RRNLEKEAKILEILAGEGVTPEVYFYGED----FIRMEYI 94 (201)
T ss_pred hhhhhhhcccccEEEEeecc-CceEEEEEecCCcc-----hhhHHHHHHHHHHhhhcCCCceEEEechh----hhhhhhh
Confidence 34567999999999999995 45788888776654 357889999999988666543 4444332 4459999
Q ss_pred cCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCC-CCceeeCCCCCeEEeeccccccc
Q 012219 252 EMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDIS-SNNVLLNSELEAFVADFGVARLL 325 (468)
Q Consensus 252 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk-~~NIll~~~~~~kl~Dfg~~~~~ 325 (468)
.|-.|.+.-... +-... ..++..---|- ..||-|+.|. |..+++..+..+.|+||..|...
T Consensus 95 ~G~~L~~~~~~~------~rk~l----~~vlE~a~~LD---~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~k 156 (201)
T COG2112 95 DGRPLGKLEIGG------DRKHL----LRVLEKAYKLD---RLGIEHGELSRPWKNVLVNDRDVYIIDFDSATFK 156 (201)
T ss_pred cCcchhhhhhcc------cHHHH----HHHHHHHHHHH---HhccchhhhcCCceeEEecCCcEEEEEccchhhc
Confidence 988887665421 11222 23344433333 6689999987 55556666669999999998743
No 492
>PRK10593 hypothetical protein; Provisional
Probab=98.01 E-value=0.00014 Score=69.13 Aligned_cols=77 Identities=19% Similarity=0.161 Sum_probs=56.3
Q ss_pred ccceeeeeCCceEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccC---CceeeEEEEEee---CCEEEEE
Q 012219 174 IKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRH---RNIVKLYGFCLH---RKCMFLI 247 (468)
Q Consensus 174 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h---~niv~l~~~~~~---~~~~~lv 247 (468)
-.+.||.|..+.||+....+++ +++|..+.... ...|..|.+.++.+.- -.+.+++++|.. .+..++|
T Consensus 18 ~~~~i~~G~~~~vy~~~~~~~~-~~~k~~~~~~~-----~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LV 91 (297)
T PRK10593 18 RVECISEQPYAALWALYDSQGN-PMPLMARSFST-----PGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLL 91 (297)
T ss_pred eeeecCCccceeEEEEEcCCCC-EEEEEeccccc-----chHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEE
Confidence 3467999999999999876664 66676543111 1467789999988853 367788888754 3568999
Q ss_pred EEeccCCCh
Q 012219 248 YEYMEMGSL 256 (468)
Q Consensus 248 ~e~~~~gsL 256 (468)
||+++++++
T Consensus 92 mE~i~G~~~ 100 (297)
T PRK10593 92 LERLRGVSV 100 (297)
T ss_pred EeccCCEec
Confidence 999998765
No 493
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=98.00 E-value=0.00019 Score=63.40 Aligned_cols=136 Identities=21% Similarity=0.304 Sum_probs=90.5
Q ss_pred ccceeeeeCCceEEEEEcCCCCEEEEEEecCcchh-------------hhhhHHHHHHHHHHHhhcc------CCceeeE
Q 012219 174 IKYCIGTGGYGSVYRARLPSGKVVALKKLHRSETE-------------ELASLESFGNEARLLSQIR------HRNIVKL 234 (468)
Q Consensus 174 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~~~e~~~l~~l~------h~niv~l 234 (468)
....||+|+.-.||. +++....+||+....... .....+++.+|+.....+. +.+|.++
T Consensus 5 ~~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~ 82 (199)
T PF10707_consen 5 ESDLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRF 82 (199)
T ss_pred CCcccccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccE
Confidence 346799999988885 445666789988766500 0012356667777666665 8899999
Q ss_pred EEEEeeCCEEEEEEEeccC--C----ChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCceee
Q 012219 235 YGFCLHRKCMFLIYEYMEM--G----SLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSYLHHDCTPPIVHRDISSNNVLL 308 (468)
Q Consensus 235 ~~~~~~~~~~~lv~e~~~~--g----sL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~LH~~~~~~ivH~dlk~~NIll 308 (468)
+|+..++...-+|+|.+.+ | +|.+++.... ++. +..+.+.+. ..||- ...|+.+|++|+||++
T Consensus 83 ~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~----~~~-~~~~~L~~f---~~~l~---~~~Iv~~dl~~~NIv~ 151 (199)
T PF10707_consen 83 YGFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG----LTE-ELRQALDEF---KRYLL---DHHIVIRDLNPHNIVV 151 (199)
T ss_pred eEEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC----ccH-HHHHHHHHH---HHHHH---HcCCeecCCCcccEEE
Confidence 9999999999999998754 2 4666664322 444 333333333 34554 5579999999999999
Q ss_pred CCCC----CeEEee-cccc
Q 012219 309 NSEL----EAFVAD-FGVA 322 (468)
Q Consensus 309 ~~~~----~~kl~D-fg~~ 322 (468)
.... .+.|.| ||..
T Consensus 152 ~~~~~~~~~lvlIDG~G~~ 170 (199)
T PF10707_consen 152 QRRDSGEFRLVLIDGLGEK 170 (199)
T ss_pred EecCCCceEEEEEeCCCCc
Confidence 5432 455665 4433
No 494
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=97.99 E-value=7.7e-06 Score=86.58 Aligned_cols=77 Identities=26% Similarity=0.470 Sum_probs=51.1
Q ss_pred CCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcCC-Cccceeccc
Q 012219 4 SKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESVR-KVPHLYVYG 82 (468)
Q Consensus 4 ~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~-~l~~l~~~~ 82 (468)
++|+.|+|++|+|+ .+|..+. .+|+.|+|++|+++ .+|..+. ++|+.|+|++|+|+ .+|..+. +|..|++++
T Consensus 220 ~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~~sL~~L~Ls~ 292 (754)
T PRK15370 220 GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CLPENLPEELRYLSVYD 292 (754)
T ss_pred cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-ccccccCCCCcEEECCC
Confidence 46777777777777 6666554 35777777777776 6666654 46777777777777 5666443 566677777
Q ss_pred ccccc
Q 012219 83 KNFDV 87 (468)
Q Consensus 83 n~l~~ 87 (468)
|++..
T Consensus 293 N~Lt~ 297 (754)
T PRK15370 293 NSIRT 297 (754)
T ss_pred Ccccc
Confidence 76654
No 495
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.98 E-value=7.8e-05 Score=65.31 Aligned_cols=128 Identities=23% Similarity=0.400 Sum_probs=90.9
Q ss_pred hCccccceeeeeCC-ceEEEEEcCCCCEEEEEEecC---cch---------hhh------hhHHHHHHHHHHHhhcc---
Q 012219 170 EDFHIKYCIGTGGY-GSVYRARLPSGKVVALKKLHR---SET---------EEL------ASLESFGNEARLLSQIR--- 227 (468)
Q Consensus 170 ~~~~~~~~lg~G~~-g~Vy~~~~~~~~~vavK~~~~---~~~---------~~~------~~~~~~~~e~~~l~~l~--- 227 (468)
.+++..+.||.|.- |.||+++. +|+.+|+|.+.. ... .+. .....|..|.+...+|+
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I-~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~ 115 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEI-DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG 115 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEE-CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence 67888999999999 99999999 577999999331 100 000 12346888999888885
Q ss_pred CCce--eeEEEEEeeC------------------CEEEEEEEeccCCChhhhhhcCcccCCCCHHHHHHHHHHHHHHHHH
Q 012219 228 HRNI--VKLYGFCLHR------------------KCMFLIYEYMEMGSLFCVLRTDEEAVGLDWAKRVNVVKGMCHALSY 287 (468)
Q Consensus 228 h~ni--v~l~~~~~~~------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~~l~~ 287 (468)
+.++ |+.+||..-. ....||.||++... .+.. +-+.+|.+-+..
T Consensus 116 ~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~------------~~~~----~~~~~~~~dl~~ 179 (207)
T PF13095_consen 116 REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP------------PLQI----RDIPQMLRDLKI 179 (207)
T ss_pred ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc------------ccch----hHHHHHHHHHHH
Confidence 4456 8999987422 12467888776533 1222 234456667888
Q ss_pred HHhcCCCCeEecCCCCCceeeCCCCCeEEeecccc
Q 012219 288 LHHDCTPPIVHRDISSNNVLLNSELEAFVADFGVA 322 (468)
Q Consensus 288 LH~~~~~~ivH~dlk~~NIll~~~~~~kl~Dfg~~ 322 (468)
+| ..||+-+|+++.|.. .-+|+|||.+
T Consensus 180 ~~---k~gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 180 LH---KLGIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HH---HCCeeeccCcccccc-----CCEEEecccC
Confidence 89 889999999999986 4578999864
No 496
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.95 E-value=6.9e-05 Score=68.81 Aligned_cols=73 Identities=14% Similarity=0.214 Sum_probs=44.3
Q ss_pred ceeeeeCCc-eEEEEEcCCCCEEEEEEecCcchhhhhhHHHHHHHHHHHhhccCC---ceeeEEEEEeeC---CEEEEEE
Q 012219 176 YCIGTGGYG-SVYRARLPSGKVVALKKLHRSETEELASLESFGNEARLLSQIRHR---NIVKLYGFCLHR---KCMFLIY 248 (468)
Q Consensus 176 ~~lg~G~~g-~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~---niv~l~~~~~~~---~~~~lv~ 248 (468)
+.|+.|+.. .||+. +..+++|..+.... ...+.+|.+.+..+... .+.++++..... ...+++|
T Consensus 3 ~~~~~gG~~n~vy~~----~~~~VlR~~~~~~~-----~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~ 73 (235)
T cd05155 3 EPVDSGGTDNATFRL----GDDMSVRLPSAAGY-----AGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVY 73 (235)
T ss_pred eeccCCCcccceEEc----CCceEEEcCCccch-----HHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEE
Confidence 346766665 58876 23467776554221 23677899988877532 334444444332 2347899
Q ss_pred EeccCCChh
Q 012219 249 EYMEMGSLF 257 (468)
Q Consensus 249 e~~~~gsL~ 257 (468)
++++|.++.
T Consensus 74 ~~i~G~~l~ 82 (235)
T cd05155 74 RWLEGETAT 82 (235)
T ss_pred EeecCCCCC
Confidence 999997764
No 497
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=97.93 E-value=1.6e-06 Score=81.45 Aligned_cols=70 Identities=23% Similarity=0.357 Sum_probs=58.2
Q ss_pred CCcEEEccCCcccccCC-cccccCCCCCEeeccCccccccccccccCCCCCceecc-cCcccccccCC-cCCCcc
Q 012219 5 KLRVLELGNNLLSGSIP-SEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDL-SMNNLSGSIPE-SVRKVP 76 (468)
Q Consensus 5 ~l~~l~l~~N~l~g~~p-~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l-~~N~l~g~~p~-~~~~l~ 76 (468)
.-+.|+|..|+|+ .|| ..|+.+.+|+.||||+|+|+-+-|++|.+|.+|..|-+ ++|+|+ .+|. .|..|.
T Consensus 68 ~tveirLdqN~I~-~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~-~l~k~~F~gL~ 140 (498)
T KOG4237|consen 68 ETVEIRLDQNQIS-SIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKIT-DLPKGAFGGLS 140 (498)
T ss_pred cceEEEeccCCcc-cCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchh-hhhhhHhhhHH
Confidence 4578999999999 666 57999999999999999999888999999999976655 559999 8886 344443
No 498
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=97.91 E-value=1.3e-05 Score=90.32 Aligned_cols=83 Identities=17% Similarity=0.243 Sum_probs=67.5
Q ss_pred CCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCcCCCccceeccc
Q 012219 3 CSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPESVRKVPHLYVYG 82 (468)
Q Consensus 3 l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~~~~l~~l~~~~ 82 (468)
+++|+.|+|++|...+.+|.++++|++|+.|+|++|...+.+|..+ ++++|+.|+|++|.....+|....+++.|++.+
T Consensus 777 ~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~~~nL~~L~Ls~ 855 (1153)
T PLN03210 777 SPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDISTNISDLNLSR 855 (1153)
T ss_pred cccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCccccccccccccCEeECCC
Confidence 3578999999998888999999999999999999987555888776 788888888888765557777666777777777
Q ss_pred cccc
Q 012219 83 KNFD 86 (468)
Q Consensus 83 n~l~ 86 (468)
|.+.
T Consensus 856 n~i~ 859 (1153)
T PLN03210 856 TGIE 859 (1153)
T ss_pred CCCc
Confidence 7665
No 499
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=97.88 E-value=3.9e-06 Score=76.13 Aligned_cols=60 Identities=27% Similarity=0.406 Sum_probs=44.6
Q ss_pred CCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccc
Q 012219 3 CSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLS 65 (468)
Q Consensus 3 l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~ 65 (468)
++.++.|+||.|+|+ .+-. ++.|.+|+.||||+|.|+ .+-..=..|-++++|+|+.|.+.
T Consensus 306 ~Pkir~L~lS~N~i~-~v~n-La~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La~N~iE 365 (490)
T KOG1259|consen 306 APKLRRLILSQNRIR-TVQN-LAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLAQNKIE 365 (490)
T ss_pred ccceeEEecccccee-eehh-hhhcccceEeecccchhH-hhhhhHhhhcCEeeeehhhhhHh
Confidence 578899999999998 6654 888999999999999998 44443344555666666666554
No 500
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=97.83 E-value=2.4e-05 Score=88.11 Aligned_cols=88 Identities=19% Similarity=0.256 Sum_probs=62.5
Q ss_pred CCCCCcEEEccCCcccccCCcccccCCCCCEeeccCccccccccccccCCCCCceecccCcccccccCCc--CCCcccee
Q 012219 2 NCSKLRVLELGNNLLSGSIPSEINKLQELNYLNLSHNSINGKILSQLGEIPRIDTVDLSMNNLSGSIPES--VRKVPHLY 79 (468)
Q Consensus 2 ~l~~l~~l~l~~N~l~g~~p~~~~~l~~L~~L~l~~N~l~g~~p~~~~~l~~L~~l~l~~N~l~g~~p~~--~~~l~~l~ 79 (468)
++++|+.|+|++|...+.+| .++.+++|+.|+|++|...+.+|.++.+|++|+.|++++|+..+.+|.. +.+|..|.
T Consensus 632 ~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i~l~sL~~L~ 710 (1153)
T PLN03210 632 SLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGINLKSLYRLN 710 (1153)
T ss_pred cCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcCCCCCCCEEe
Confidence 46788888888776555777 4777888888888887766688888888888888888876544477763 45566666
Q ss_pred cccccccccCC
Q 012219 80 VYGKNFDVEIP 90 (468)
Q Consensus 80 ~~~n~l~~~~p 90 (468)
++++......|
T Consensus 711 Lsgc~~L~~~p 721 (1153)
T PLN03210 711 LSGCSRLKSFP 721 (1153)
T ss_pred CCCCCCccccc
Confidence 66665433333
Done!